BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047659
         (619 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 301/577 (52%), Positives = 408/577 (70%), Gaps = 21/577 (3%)

Query: 46  NNPTPAIQFFKWTHN----CVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTY--- 98
           +NPT A++FF+W  N    C    +   + HVLL+  M D A+ VFD+MV QFG      
Sbjct: 67  SNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLG 126

Query: 99  NFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
            F   FR+   +    YSFL+  Y R G +D +V+ FA+MS MG+ +S      ++  L+
Sbjct: 127 EFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLI 186

Query: 159 DSNSVG----QYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           DS+ +      Y ++C     KG  VYEF+ N  L++G +E   + HR +++RG VP IV
Sbjct: 187 DSDRIDVILENYEEMC-----KGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIV 241

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
            CNKILK LC+  QIG AS  FD+++  GP PN+VTFSTLIN +CKE +L++AF LYNLM
Sbjct: 242 DCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLM 301

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +E  +VPDL+IYSILI+GLF+AG+L+EGN L   AL RG+K+DVV+FSS+MDAYV +GD+
Sbjct: 302 IEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDL 361

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
           G+A++ Y RML  G  PNV++YSILI GLC+ GR++EACG+FGQ+L + LEPS+LTYSSL
Sbjct: 362 GKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL 421

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           IDGFCKS  LRDGF LY  M+++G  PD VVCS+LINGL     M +ALRFFFQ+V+  L
Sbjct: 422 IDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL 481

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
             N ++FN L+DGC RLKR  D +K+++LMGMY + PDV+T+TVL++G+A QG L  A+ 
Sbjct: 482 TLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALA 541

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LFFQ+LK+G +PD I Y  +I G  K ++ + GL +FKLM+ NG+ PDI IYNVL+NM  
Sbjct: 542 LFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFF 601

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +E  ++  L+L  ++   GLEPDI+TYNT+ICGYCSL
Sbjct: 602 REGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSL 638



 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 165/536 (30%), Positives = 288/536 (53%), Gaps = 26/536 (4%)

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           VAS  FD M+++ G + N               +S LI  Y +  ++DE+  ++  M + 
Sbjct: 258 VASDFFD-MMVRSGPSPNL------------VTFSTLINVYCKELRLDEAFSLYNLMIEK 304

Query: 142 GIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIE 195
           GI   PDLV    L++ L  +  + +   L      +G      ++  +M+  +R G + 
Sbjct: 305 GIV--PDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLG 362

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  ++ ++++ G  PN+VT + ++  LC NG++  A  +F  +L  G +P+V+T+S+LI
Sbjct: 363 KAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLI 422

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           + FCK   L   F LY +M+    VPD+++ S+LI+GL + G + E       A+ RGL 
Sbjct: 423 DGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLT 482

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           L+  +F++++D    +      ++ Y  M     +P+V++Y++L+KGL +QGRL EA  L
Sbjct: 483 LNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALAL 542

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
           F Q+L +   P  + Y +LIDGFCK      G  ++  M   G+ PD  + ++LIN    
Sbjct: 543 FFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602

Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            G + + L    + ++  L P++  +NT++ G C LK  +  +KLF ++     +P+ IT
Sbjct: 603 EGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAIT 662

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
            T+LI      G +  A+L+F  ML+RG  P+++TYS +I G FK +N      +++ M 
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML 722

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            + V+P+I  Y++L++ L K+  ++ A   F     R L PD+I Y  +I GYC +
Sbjct: 723 GDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKV 778



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 219/481 (45%), Gaps = 69/481 (14%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           + R+ ++ +      YS LI    R G++ E+  +F  +   G+  S      L+     
Sbjct: 368 YTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCK 427

Query: 160 SNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF------ 209
           S ++   + L   M  KG      V   L+NGL R+G+++ A     Q ++RG       
Sbjct: 428 SENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYL 487

Query: 210 -----------------------------VPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
                                        +P++VT   ++K L   G++  A +LF  LL
Sbjct: 488 FNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLL 547

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+ + + TLI+ FCK+       Q++ LM    + PD+ IY++LI+  F+ G ++
Sbjct: 548 KKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVE 607

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              ELL   +  GL+ D+V +++++  Y  +    +A++ ++ +  G   PN I+++ILI
Sbjct: 608 NVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILI 667

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              C+ GR+ +A  +F  +L R  EP++LTYS LIDG+ K+      F LY+ M      
Sbjct: 668 DAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKM------ 721

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
                        +GD +            PN+  ++ L+DG C+     +    F    
Sbjct: 722 -------------LGDRVS-----------PNIVSYSILIDGLCKKGLMEEASLAFQCAI 757

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
             ++ PDVI + +LIRG    G L+ A++L+  ML  G+ PD +   A+    F+    S
Sbjct: 758 GRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQAS 817

Query: 541 V 541
           +
Sbjct: 818 I 818



 Score = 38.5 bits (88), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 6/126 (4%)

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
           Y   P  + ++ L+      G +  A+  F  M K G++      S ++  L     I V
Sbjct: 135 YGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDV 193

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L  ++ M +      + +Y  + N  +K   ++  L     L +RGL P I+  N I+ 
Sbjct: 194 ILENYEEMCKG-----LGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILK 248

Query: 602 GYCSLN 607
           G C  N
Sbjct: 249 GLCMGN 254


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 301/577 (52%), Positives = 408/577 (70%), Gaps = 21/577 (3%)

Query: 46  NNPTPAIQFFKWTHN----CVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTY--- 98
           +NPT A++FF+W  N    C    +   + HVLL+  M D A+ VFD+MV QFG      
Sbjct: 67  SNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLG 126

Query: 99  NFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
            F   FR+   +    YSFL+  Y R G +D +V+ FA+MS MG+ +S      ++  L+
Sbjct: 127 EFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLI 186

Query: 159 DSNSVG----QYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           DS+ +      Y ++C     KG  VYEF+ N  L++G +E   + HR +++RG VP IV
Sbjct: 187 DSDRIDVILENYEEMC-----KGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIV 241

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
            CNKILK LC+  QIG AS  FD+++  GP PN+VTFSTLIN +CKE +L++AF LYNLM
Sbjct: 242 DCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLM 301

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +E  +VPDL+IYSILI+GLF+AG+L+EGN L   AL RG+K+DVV+FSS+MDAYV +GD+
Sbjct: 302 IEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDL 361

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
           G+A++ Y RML  G  PNV++YSILI GLC+ GR++EACG+FGQ+L + LEPS+LTYSSL
Sbjct: 362 GKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL 421

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           IDGFCKS  LRDGF LY  M+++G  PD VVCS+LINGL     M +ALRFFFQ+V+  L
Sbjct: 422 IDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL 481

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
             N ++FN L+DGC RLKR  D +K+++LMGMY + PDV+T+TVL++G+A QG L  A+ 
Sbjct: 482 TLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALA 541

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LFFQ+LK+G +PD I Y  +I G  K ++ + GL +FKLM+ NG+ PDI IYNVL+NM  
Sbjct: 542 LFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFF 601

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +E  ++  L+L  ++   GLEPDI+TYNT+ICGYCSL
Sbjct: 602 REGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSL 638



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 165/536 (30%), Positives = 288/536 (53%), Gaps = 26/536 (4%)

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           VAS  FD M+++ G + N               +S LI  Y +  ++DE+  ++  M + 
Sbjct: 258 VASDFFD-MMVRSGPSPNL------------VTFSTLINVYCKELRLDEAFSLYNLMIEK 304

Query: 142 GIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIE 195
           GI   PDLV    L++ L  +  + +   L      +G      ++  +M+  +R G + 
Sbjct: 305 GIV--PDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLG 362

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  ++ ++++ G  PN+VT + ++  LC NG++  A  +F  +L  G +P+V+T+S+LI
Sbjct: 363 KAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLI 422

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           + FCK   L   F LY +M+    VPD+++ S+LI+GL + G + E       A+ RGL 
Sbjct: 423 DGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLT 482

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           L+  +F++++D    +      ++ Y  M     +P+V++Y++L+KGL +QGRL EA  L
Sbjct: 483 LNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALAL 542

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
           F Q+L +   P  + Y +LIDGFCK      G  ++  M   G+ PD  + ++LIN    
Sbjct: 543 FFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602

Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            G + + L    + ++  L P++  +NT++ G C LK  +  +KLF ++     +P+ IT
Sbjct: 603 EGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAIT 662

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
            T+LI      G +  A+L+F  ML+RG  P+++TYS +I G FK +N      +++ M 
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML 722

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            + V+P+I  Y++L++ L K+  ++ A   F     R L PD+I Y  +I GYC +
Sbjct: 723 GDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKV 778



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 211/439 (48%), Gaps = 44/439 (10%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           + R+ ++ +      YS LI    R G++ E+  +F  +   G+  S      L+     
Sbjct: 368 YTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCK 427

Query: 160 SNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF------ 209
           S ++   + L   M  KG      V   L+NGL R+G+++ A     Q ++RG       
Sbjct: 428 SENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYL 487

Query: 210 -----------------------------VPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
                                        +P++VT   ++K L   G++  A +LF  LL
Sbjct: 488 FNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLL 547

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+ + + TLI+ FCK+       Q++ LM    + PD+ IY++LI+  F+ G ++
Sbjct: 548 KKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVE 607

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              ELL   +  GL+ D+V +++++  Y  +    +A++ ++ +  G   PN I+++ILI
Sbjct: 608 NVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILI 667

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              C+ GR+ +A  +F  +L R  EP++LTYS LIDG+ K+      F LY+ M+   + 
Sbjct: 668 DAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVS 727

Query: 421 PDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  S+LI+     GLM +A   F  ++   L+P++  +  L+ G C++ R  + + L
Sbjct: 728 PNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMML 787

Query: 476 FMLMGMYNIKPDVITHTVL 494
           +  M +  I PD +    L
Sbjct: 788 YDHMLVNGIMPDDLLQKAL 806



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 9/294 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++     G++DE++ +F  +   G   SPD +    L+             ++ + 
Sbjct: 523 YTVLVKGLAEQGRLDEALALFFQLLKKG--FSPDHIIYCTLIDGFCKKRDPATGLQIFKL 580

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G     C+Y  L+N   R+G +EN   + R++I+ G  P+IVT N ++   C    
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKI 640

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  LF+VL     +PN +TF+ LI+A+CK+ +++ A  +++ M+E    P+++ YS 
Sbjct: 641 FSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSC 700

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDG FK    +   EL    L   +  ++V +S ++D     G +  A   +   +   
Sbjct: 701 LIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRH 760

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID-GFCKS 401
            LP+VI+Y ILI+G C+ GRL EA  L+  +L+  + P  L   +L + GF  S
Sbjct: 761 LLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDS 814



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 31/186 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI+ Y + G++D+++ IF+ M + G    P+      SCL+D               
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSMLERG----PEPNILTYSCLID--------------- 703

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                       G  +    E+AF ++ +++     PNIV+ + ++  LC  G +  AS 
Sbjct: 704 ------------GYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASL 751

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            F   +     P+V+ +  LI  +CK  +L +A  LY+ M+   ++PD ++   L +  F
Sbjct: 752 AFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGF 811

Query: 295 KAGRLK 300
           +  + K
Sbjct: 812 QDSQAK 817



 Score = 38.5 bits (88), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 6/127 (4%)

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
           Y   P  + ++ L+      G +  A+  F  M K G++      S ++  L     I V
Sbjct: 135 YGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDV 193

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L  ++ M +      + +Y  + N  +K   ++  L     L +RGL P I+  N I+ 
Sbjct: 194 ILENYEEMCKG-----LGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILK 248

Query: 602 GYCSLNS 608
           G C  N 
Sbjct: 249 GLCMGNQ 255


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 310/598 (51%), Positives = 412/598 (68%), Gaps = 20/598 (3%)

Query: 27  ISDLQFNQANAILANLIKTNNPTPAIQFFKWTHN----CVSSPNIAQLIHVLLQSDMRDV 82
           +S LQ      ++ +L     P  AI+FF+W  +     +S+P+   L+HVLLQ+ +   
Sbjct: 75  LSKLQLYHVPDVIISL--QPKPFSAIRFFEWAESFFISPLSAPSFCALLHVLLQNQLFSR 132

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAY 137
           A+ VFDK ++QFG  Y+    FRD   D         Y FLIE+Y R G  D+SV+IF +
Sbjct: 133 AACVFDKFIMQFGNDYDTLDAFRDGFCDLDSTNHSVVYGFLIESYCRKGMFDKSVDIFMH 192

Query: 138 MSDMGIYLSPDLVQRLMSCLVDSNSV----GQYYKLCRAMRGKGFCVYEFLMNGLLRKGV 193
           +   GI++SP++V  L+  L+DS+ V     +Y +LC AMR + F VYEF+MN  + KG 
Sbjct: 193 VCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGE 252

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +E     H+ ++Q GF  +I+TCNKILK + +   IG A   F++++ +GPKPNVVTFST
Sbjct: 253 VEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFST 312

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI+A+CKE  L+KAF L+++M    + PDLI+YSILIDGLFKAGRL++G  LLL ALD+G
Sbjct: 313 LIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKG 372

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +KLDVV FSS MDAYV IGD+GR +Q Y RMLN G  PNV+S SILIKG CQ GR++EAC
Sbjct: 373 IKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEAC 432

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
           GLF Q+L    EPS+LTYS+LI GFCKSG LRDGF LY++MIK+  +PD +V S+LIN  
Sbjct: 433 GLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGL 492

Query: 432 ---GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
              GL+GDALRFFFQ+V   L PN+F  NTL+D  CRLK     +K++ LMGM NIK D 
Sbjct: 493 CKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADT 552

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+T+LI+G A  G +  A++LFFQMLK+   PDVITY  +I GL K K  S GL +F  
Sbjct: 553 VTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDF 612

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           M +N VAPDIAIYNVL+NM  +E +L+AAL LF  + +RG +PD+ T+NT+IC YC+ 
Sbjct: 613 MCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNF 670



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 168/506 (33%), Positives = 278/506 (54%), Gaps = 18/506 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN------SVGQYYK 168
           +S LI+ Y + G +D++  +F  M+  G+  +PDL+  + S L+D          GQ   
Sbjct: 310 FSTLIDAYCKEGNLDKAFVLFDVMAGNGV--TPDLI--VYSILIDGLFKAGRLEDGQRLL 365

Query: 169 LCRAMRGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           L    +G    V  F   M+  ++ G +     ++++++  G  PN+V+C+ ++K  C N
Sbjct: 366 LVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQN 425

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+I  A  LF  +L +G +P+++T+S LI  FCK   L   F LY  M++    PD I+Y
Sbjct: 426 GRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVY 485

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           S+LI+GL K G + +       A++RGL  +V   ++++D++  +  +  A++ Y  M  
Sbjct: 486 SVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGM 545

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
                + ++Y+ILIKG  Q GR+ EA  LF Q+L +  +P ++TY +LIDG CK  K   
Sbjct: 546 LNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSA 605

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
           G  ++D M K  + PD  + ++LIN     G +  AL  F   V     P++F FNT++ 
Sbjct: 606 GLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMIC 665

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C  KR  D V+LF  M    ++P+ IT T+LI     +G +  A+L+F +ML+ G  P
Sbjct: 666 CYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEP 725

Query: 522 DVITYSAIIHGLFKGKNI-SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           +++TYS +IHG FK +++   GL ++  M  N +AP+I  Y++L++ L K   +  A   
Sbjct: 726 NLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCA 785

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSL 606
           F    D+ L PD+I Y  +I GYC +
Sbjct: 786 FRCALDKHLLPDVIAYTILIRGYCKV 811



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 231/457 (50%), Gaps = 18/457 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS--------NSVGQY 166
           +S  ++ YV+IG +   ++I+  M + GI  SP++V    S L+           + G +
Sbjct: 380 FSSAMDAYVKIGDLGRVIQIYKRMLNEGI--SPNVVS--CSILIKGFCQNGRILEACGLF 435

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            ++ +         Y  L+ G  + G + + F+++  +I++   P+ +  + ++  LC  
Sbjct: 436 VQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQ 495

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +G+A   F   +  G  PNV T +TL+++FC+   +  A ++Y LM  +++  D + Y
Sbjct: 496 GLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTY 555

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +ILI G  + GR+ E   L    L +  K DV+ + +++D    +      +  +D M  
Sbjct: 556 TILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCK 615

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               P++  Y++LI    ++G L  A GLF  V+ R  +P + T++++I  +C   +L D
Sbjct: 616 NAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDD 675

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              L+  M    L+P+A+  ++LI+     G M DA+  F + +     PNL  ++ L+ 
Sbjct: 676 AVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIH 735

Query: 462 GCCRLKRATDT-VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           G  + +   ++ +KL+  M   NI P+++++++LI G+  +G +  A   F   L + L 
Sbjct: 736 GYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLL 795

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           PDVI Y+ +I G  K   ++  + ++  M  N + PD
Sbjct: 796 PDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/596 (44%), Positives = 382/596 (64%), Gaps = 16/596 (2%)

Query: 22  ESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRD 81
           +S  + S+LQ N+ N +L +L   + P  A+++F+W       P+   + HVL+++ M D
Sbjct: 59  DSSVYGSNLQRNETNLVLLSL--ESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFD 116

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRD-SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
           VA  VFD+M+   GK +N     RD SL    C   FL+E   R G +D+++EIF Y + 
Sbjct: 117 VADKVFDEMITNRGKDFNVLGSIRDRSLDADVC--KFLMECCCRYGMVDKALEIFVYSTQ 174

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVG----QYYKLCRA-MRGKGFCVYEFLMNGLLRKGVIE 195
           +G+ +  D V R+++ L+ S+ V      + KLCR  +   G   + F+++ L  KG + 
Sbjct: 175 LGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVT 234

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A   HR V++RGF   IV+CNK+LK L ++ QI  AS L  ++L  GP PNVVTF TLI
Sbjct: 235 KALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLI 293

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N FCK  ++++AF L+ +M +  + PDLI YS LIDG FKAG L  G++L   AL +G+K
Sbjct: 294 NGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           LDVVVFSS +D YV  GD+  A   Y RML  G  PNV++Y+ILIKGLCQ GR+ EA G+
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
           +GQ+L R +EPS++TYSSLIDGFCK G LR GF+LY++MIK G  PD V+  +L++    
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473

Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            GLM  A+RF  + +  ++  N+ +FN+L+DG CRL R  + +K+F LMG+Y IKPDV T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
            T ++R    +G L  A+ LFF+M K GL PD + Y  +I    K    ++GL +F LM+
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           RN ++ DIA+ NV++++L K   ++ A K F  L +  +EPDI+TYNT+ICGYCSL
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649



 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 150/502 (29%), Positives = 271/502 (53%), Gaps = 17/502 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLCRAM 173
           LI  + + G++D + ++F  M   GI   PDL+    S L+D    +  +G  +KL    
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGI--EPDLIA--YSTLIDGYFKAGMLGMGHKLFSQA 347

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             KG      V+   ++  ++ G +  A  ++++++ +G  PN+VT   ++K LC +G+I
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  ++  +L  G +P++VT+S+LI+ FCK   L   F LY  M++M   PD++IY +L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           +DGL K G +       +  L + ++L+VVVF+S++D +  +     A++ +  M   G 
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V +++ +++    +GRL EA  LF ++    LEP  L Y +LID FCK  K   G  
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L+D M +  +  D  VC+++I+ L     + DA +FF   +   + P++  +NT++ G C
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
            L+R  +  ++F L+ +    P+ +T T+LI  +     +  AI +F  M ++G  P+ +
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY  ++    K  +I     +F+ M+  G++P I  Y+++++ L K   +D A  +F Q 
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
            D  L PD++ Y  +I GYC +
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKV 789



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 198/365 (54%), Gaps = 17/365 (4%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLV-PDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           L+   C+   ++KA +++    ++ +V P   +Y +L + L  + R+    +L+    D+
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRV----DLIADHFDK 206

Query: 313 ----GLKLD-VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
               G++   V     V+DA    G+V +A+  +  ++  GF   ++S + ++KGL    
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD- 265

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           ++  A  L   VL     P+++T+ +LI+GFCK G++   F L+  M +RG++PD +  S
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 428 LLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            LI+G     ++G   + F Q++   +  ++ +F++ +D   +         ++  M   
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            I P+V+T+T+LI+G+   G +  A  ++ Q+LKRG+ P ++TYS++I G  K  N+  G
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +++ M + G  PD+ IY VL++ L K+  +  A++   ++  + +  +++ +N++I G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505

Query: 603 YCSLN 607
           +C LN
Sbjct: 506 WCRLN 510



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 194/393 (49%), Gaps = 17/393 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS----VGQYYKLC 170
           YS LI+ + + G +     ++  M  MG    PD+V  +   LVD  S    +    +  
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMG--YPPDVV--IYGVLVDGLSKQGLMLHAMRFS 484

Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M G+       V+  L++G  R    + A  + R +   G  P++ T   +++   + 
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++  A  LF  +  +G +P+ + + TLI+AFCK  K     QL++LM    +  D+ + 
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +++I  LFK  R+++ ++     ++  ++ D+V +++++  Y  +  +  A + ++ +  
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
             F PN ++ +ILI  LC+   +  A  +F  +  +  +P+ +TY  L+D F KS  +  
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            F L++ M ++G+ P  V  S++I+GL     + +A   F Q++   L+P++  +  L+ 
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
           G C++ R  +   L+  M    +KPD +    L
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 24/205 (11%)

Query: 422 DAVVCSLLIN-----GLMGDALRFFFQSVRM-TLIPNLFIFNTL--MDGCCRLKRATDTV 473
           DA VC  L+      G++  AL  F  S ++  +IP   ++  L  + G  R+    D  
Sbjct: 145 DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHF 204

Query: 474 KLFMLMGMYNIKPD-VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
                 G   I+P  V  H  ++  +  +G ++ A+     +++RG    +++ + ++ G
Sbjct: 205 DKLCRGG---IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG 261

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L     I V   +  L+   G AP++  +  L+N   K   +D A  LF  +  RG+EPD
Sbjct: 262 L-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320

Query: 593 IITYNTIICGYCSLNSCLIDGYFKS 617
           +I Y+T           LIDGYFK+
Sbjct: 321 LIAYST-----------LIDGYFKA 334


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/596 (44%), Positives = 382/596 (64%), Gaps = 16/596 (2%)

Query: 22  ESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRD 81
           +S  + S+LQ N+ N +L +L   + P  A+++F+W       P+   + HVL+++ M D
Sbjct: 59  DSSVYGSNLQRNETNLVLLSL--ESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFD 116

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRD-SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
           VA  VFD+M+   GK +N     RD SL    C   FL+E   R G +D+++EIF Y + 
Sbjct: 117 VADKVFDEMITNRGKDFNVLGSIRDRSLDADVC--KFLMECCCRYGMVDKALEIFVYSTQ 174

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVG----QYYKLCRA-MRGKGFCVYEFLMNGLLRKGVIE 195
           +G+ +  D V R+++ L+ S+ V      + KLCR  +   G   + F+++ L  KG + 
Sbjct: 175 LGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVT 234

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A   HR V++RGF   IV+CNK+LK L ++ QI  AS L  ++L  GP PNVVTF TLI
Sbjct: 235 KALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLI 293

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N FCK  ++++AF L+ +M +  + PDLI YS LIDG FKAG L  G++L   AL +G+K
Sbjct: 294 NGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           LDVVVFSS +D YV  GD+  A   Y RML  G  PNV++Y+ILIKGLCQ GR+ EA G+
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
           +GQ+L R +EPS++TYSSLIDGFCK G LR GF+LY++MIK G  PD V+  +L++    
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473

Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            GLM  A+RF  + +  ++  N+ +FN+L+DG CRL R  + +K+F LMG+Y IKPDV T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
            T ++R    +G L  A+ LFF+M K GL PD + Y  +I    K    ++GL +F LM+
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           RN ++ DIA+ NV++++L K   ++ A K F  L +  +EPDI+TYNT+ICGYCSL
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 198/365 (54%), Gaps = 17/365 (4%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLV-PDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           L+   C+   ++KA +++    ++ +V P   +Y +L + L  + R+    +L+    D+
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRV----DLIADHFDK 206

Query: 313 ----GLKLD-VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
               G++   V     V+DA    G+V +A+  +  ++  GF   ++S + ++KGL    
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD- 265

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           ++  A  L   VL     P+++T+ +LI+GFCK G++   F L+  M +RG++PD +  S
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 428 LLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            LI+G     ++G   + F Q++   +  ++ +F++ +D   +         ++  M   
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            I P+V+T+T+LI+G+   G +  A  ++ Q+LKRG+ P ++TYS++I G  K  N+  G
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +++ M + G  PD+ IY VL++ L K+  +  A++   ++  + +  +++ +N++I G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505

Query: 603 YCSLN 607
           +C LN
Sbjct: 506 WCRLN 510



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 136/290 (46%), Gaps = 4/290 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   + G+I E+  ++  +   G+  S      L+       ++   + L   M 
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G+     +Y  L++GL ++G++ +A     +++ +    N+V  N ++   C   +  
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F ++ + G KP+V TF+T++     E +LE+A  L+  M +M L PD + Y  LI
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D   K  +   G +L        +  D+ V + V+        +  A + ++ ++ G   
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           P++++Y+ +I G C   RL EA  +F  + +    P+ +T + LI   CK
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 24/205 (11%)

Query: 422 DAVVCSLLIN-----GLMGDALRFFFQSVRM-TLIPNLFIFNTL--MDGCCRLKRATDTV 473
           DA VC  L+      G++  AL  F  S ++  +IP   ++  L  + G  R+    D  
Sbjct: 145 DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHF 204

Query: 474 KLFMLMGMYNIKPD-VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
                 G   I+P  V  H  ++  +  +G ++ A+     +++RG    +++ + ++ G
Sbjct: 205 DKLCRGG---IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG 261

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L     I V   +  L+   G AP++  +  L+N   K   +D A  LF  +  RG+EPD
Sbjct: 262 L-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320

Query: 593 IITYNTIICGYCSLNSCLIDGYFKS 617
           +I Y+T           LIDGYFK+
Sbjct: 321 LIAYST-----------LIDGYFKA 334


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/596 (42%), Positives = 365/596 (61%), Gaps = 45/596 (7%)

Query: 22  ESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRD 81
           +S  + S+LQ N+ N +L +L   + P  A+++F+W       P+   + HVL+++ M D
Sbjct: 59  DSSVYGSNLQRNETNLVLLSL--ESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFD 116

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRD-SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
           VA  VFD+M+   GK +N     RD SL    C   FL+E   R G +D+++EIF Y + 
Sbjct: 117 VADKVFDEMITNRGKDFNVLGSIRDRSLDADVC--KFLMECCCRYGMVDKALEIFVYSTQ 174

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVG----QYYKLCRA-MRGKGFCVYEFLMNGLLRKGVIE 195
           +G+ +  D V R+++ L+ S+ V      + KLCR  +   G   + F+++ L  KG + 
Sbjct: 175 LGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVT 234

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A   HR V++RGF   IV+CNK+LK L ++ QI  AS L  ++L  GP PNVVTF TLI
Sbjct: 235 KALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLI 293

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N FCK  ++++AF L+ +M +  + PDLI YS LIDG FKAG L  G++L   AL +G+K
Sbjct: 294 NGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           LDVVVFSS +D YV  GD+  A   Y RML  G  PNV++Y+ILIKGLCQ GR+ EA G+
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
           +GQ+L R +EPS++TYSSLIDGFCK G LR GF+LY++MIK G  PD V+  +L++    
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473

Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            GLM  A+RF  + +  ++  N+ +FN+L+DG CRL R  + +K+F LMG+Y IKPDV T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
            T ++R                              S +     K    ++GL +F LM+
Sbjct: 534 FTTVMR-----------------------------VSIMEDAFCKHMKPTIGLQLFDLMQ 564

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           RN ++ DIA+ NV++++L K   ++ A K F  L +  +EPDI+TYNT+ICGYCSL
Sbjct: 565 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 620



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 245/500 (49%), Gaps = 42/500 (8%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI  + + G++D + ++F  M   GI   PDL+                           
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGI--EPDLI--------------------------- 322

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y  L++G  + G++     +  Q + +G   ++V  +  +     +G +  AS ++ 
Sbjct: 323 --AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L  G  PNVVT++ LI   C++ ++ +AF +Y  +++  + P ++ YS LIDG  K G
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            L+ G  L    +  G   DVV++  ++D     G +  A++   +ML      NV+ ++
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI------DGFCKSGKLRDGFSLY 411
            LI G C+  R  EA  +F  + I  ++P + T+++++      D FCK  K   G  L+
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLF 560

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           D M +  +  D  VC+++I+ L     + DA +FF   +   + P++  +NT++ G C L
Sbjct: 561 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 620

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           +R  +  ++F L+ +    P+ +T T+LI  +     +  AI +F  M ++G  P+ +TY
Sbjct: 621 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 680

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
             ++    K  +I     +F+ M+  G++P I  Y+++++ L K   +D A  +F Q  D
Sbjct: 681 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 740

Query: 587 RGLEPDIITYNTIICGYCSL 606
             L PD++ Y  +I GYC +
Sbjct: 741 AKLLPDVVAYAILIRGYCKV 760



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 162/319 (50%), Gaps = 47/319 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           ++ LI+ + R+ + DE++++F  M   GIY + PD+                        
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLM---GIYGIKPDVAT---------------------- 533

Query: 174 RGKGFCVYEFLMNGLLRKGVIENAFHMHRQ---------VIQRGFV-PNIVTCNKILKRL 223
                         ++R  ++E+AF  H +         ++QR  +  +I  CN ++  L
Sbjct: 534 -----------FTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
               +I +AS  F+ L+    +P++VT++T+I  +C   +L++A +++ L+      P+ 
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           +  +ILI  L K   +     +     ++G K + V +  +MD +    D+  + + ++ 
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M   G  P+++SYSI+I GLC++GR+ EA  +F Q +  +L P ++ Y+ LI G+CK G+
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 762

Query: 404 LRDGFSLYDNMIKRGLKPD 422
           L +   LY++M++ G+KPD
Sbjct: 763 LVEAALLYEHMLRNGVKPD 781



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 24/205 (11%)

Query: 422 DAVVCSLLIN-----GLMGDALRFFFQSVRM-TLIPNLFIFNTL--MDGCCRLKRATDTV 473
           DA VC  L+      G++  AL  F  S ++  +IP   ++  L  + G  R+    D  
Sbjct: 145 DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHF 204

Query: 474 KLFMLMGMYNIKPD-VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
                 G   I+P  V  H  ++  +  +G ++ A+     +++RG    +++ + ++ G
Sbjct: 205 DKLCRGG---IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG 261

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L     I V   +  L+   G AP++  +  L+N   K   +D A  LF  +  RG+EPD
Sbjct: 262 L-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320

Query: 593 IITYNTIICGYCSLNSCLIDGYFKS 617
           +I Y+T           LIDGYFK+
Sbjct: 321 LIAYST-----------LIDGYFKA 334


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/454 (48%), Positives = 302/454 (66%), Gaps = 7/454 (1%)

Query: 159 DSNSVGQYYKLCRAMRGK-GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           D      + KLCR      G   + F+++ L RKG +  A   HR V++RGF  +IV+CN
Sbjct: 89  DGQRSDSFDKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCN 148

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           KILK L ++ QI  AS +  ++L  GP PNVVTF TLIN FCK  ++++AF+L+ +M + 
Sbjct: 149 KILKGLSVD-QIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQR 207

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + PDLI YS LIDG FKAG L  G++L   AL +G+KLDVVVFSS +D YV  G +  A
Sbjct: 208 GIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTA 267

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
              Y RML  G  PNV++Y+ILIKGLCQ GR+ EA G++ Q+L R LEPS++TYSSLIDG
Sbjct: 268 FDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDG 327

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPN 452
           FCK G LR GF+LY++MIK G  PD V+  +L++     GLM  ALRF  +++  ++ PN
Sbjct: 328 FCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPN 387

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           + +FN+L+DG CRL R  + +K+F LMG+Y IKPDV T T L+R    +G L   + LFF
Sbjct: 388 VVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFF 447

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M K GL PD + +  ++    K    ++GL +F LM+RN +  DIA+ NV++N+L K  
Sbjct: 448 RMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQ 507

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +++ A K F  L +  +EPDI+TYNT+ICGYCSL
Sbjct: 508 SVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSL 541



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 245/480 (51%), Gaps = 44/480 (9%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLCRAM 173
           LI  + + G++D + E+F  M   GI  +PDL+    S L+D    +  +G  +KL    
Sbjct: 184 LINGFCKRGEMDRAFELFKVMEQRGI--APDLIA--YSTLIDGYFKAGMLGMGHKLFSQA 239

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             KG      V+   ++  ++ G +  AF ++++++ +G  PN+VT   ++K LC +G+I
Sbjct: 240 LHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRI 299

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  ++  +L  G +P+VVT+S+LI+ FCK   L   F LY  M++M   PD++IY +L
Sbjct: 300 YEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVL 359

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           +DGL K G +       +  L + ++ +VVVF+S++D +  +     A++ +  M   G 
Sbjct: 360 VDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGI 419

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V + + L++    +GRL E   LF ++    LEP  + + +L+D FCK+ K   G  
Sbjct: 420 KPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQ 479

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L+D M +  +  D  VC+++IN L     + +A +FF   +   + P++  +NT++ G C
Sbjct: 480 LFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYC 539

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIR---------------------------G 497
            L+R  +  ++F ++      P+ +T T+LI                            G
Sbjct: 540 SLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIIDG 599

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +  +G +  A  +F Q +   + PDV+ Y+ +I G  K   +     +++ M RNGV PD
Sbjct: 600 LCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPD 659



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 140/559 (25%), Positives = 265/559 (47%), Gaps = 60/559 (10%)

Query: 96  KTYNFFRLFRDSLGDFGCD-YSFLIENYVRIGKIDESVEIFAYMSDMGIY---------- 144
           ++ +F +L R     FG   + F+++   R G++ ++++    + + G            
Sbjct: 92  RSDSFDKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKIL 151

Query: 145 --LSPDLVQ---RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFH 199
             LS D ++   R++S ++D          C             L+NG  ++G ++ AF 
Sbjct: 152 KGLSVDQIEVASRMLSLVLDCGPAPNVVTFCT------------LINGFCKRGEMDRAFE 199

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           + + + QRG  P+++  + ++      G +G    LF   L  G K +VV FS+ I+ + 
Sbjct: 200 LFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYV 259

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K   L  AF +Y  M+   + P+++ Y+ILI GL + GR+ E   +    L RGL+  VV
Sbjct: 260 KFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVV 319

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            +SS++D +   G++      Y+ M+  G+ P+V+ Y +L+ GLC+QG ++ A     + 
Sbjct: 320 TYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKT 379

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLM 434
           L + + P+++ ++SLIDG+C+  +  +   ++  M   G+KPD    + L+      G +
Sbjct: 380 LGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRL 439

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            + L  FF+  +M L P+   F TLMD  C+  + T  ++LF LM    I  D+    V+
Sbjct: 440 KEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVV 499

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I  +    S+  A   F  +L+  + PD++TY+ +I G    + +     +F++++    
Sbjct: 500 INLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPF 559

Query: 555 APDIAIYNVLLNMLIKECNLDAALK---------------------------LFGQLTDR 587
            P+     +L++ L K  ++D AL+                           +F Q  D 
Sbjct: 560 GPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDA 619

Query: 588 GLEPDIITYNTIICGYCSL 606
            + PD++ Y  +I G C +
Sbjct: 620 KILPDVVAYAILIRGCCKV 638



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 166/291 (57%), Gaps = 6/291 (2%)

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           V+DA    G+V +A+  +  ++  GF  +++S + ++KGL    ++  A  +   VL   
Sbjct: 115 VLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGLSVD-QIEVASRMLSLVLDCG 173

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDAL 438
             P+++T+ +LI+GFCK G++   F L+  M +RG+ PD +  S LI+G     ++G   
Sbjct: 174 PAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGH 233

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           + F Q++   +  ++ +F++ +D   +    T    ++  M    I P+V+T+T+LI+G+
Sbjct: 234 KLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGL 293

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G +  A  ++ Q+LKRGL P V+TYS++I G  K  N+  G  +++ M + G  PD+
Sbjct: 294 CQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDV 353

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            IY VL++ L K+  +  AL+   +   + + P+++ +N++I G+C LN C
Sbjct: 354 VIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRC 404



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 12/130 (9%)

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           V  H  ++  +  +G ++ A+     +++RG   D+++ + I+ GL     I V   M  
Sbjct: 109 VSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGL-SVDQIEVASRMLS 167

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L+   G AP++  +  L+N   K   +D A +LF  +  RG+ PD+I Y+T         
Sbjct: 168 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYST--------- 218

Query: 608 SCLIDGYFKS 617
             LIDGYFK+
Sbjct: 219 --LIDGYFKA 226


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 166/607 (27%), Positives = 292/607 (48%), Gaps = 64/607 (10%)

Query: 46  NNPTPAIQFFKWT-------HNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTY 98
           ++P  A++FF W        HN  +     +L   LL++   D   H+  K     G T 
Sbjct: 2   SDPDAALRFFHWASKQQGFDHNVYT---YNRLFEALLRARRIDETCHIL-KNGWPPGITP 57

Query: 99  NFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
           N F             Y+ +I+   + G +D++ E+   M + G      +   ++  L 
Sbjct: 58  NVF------------TYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALC 105

Query: 159 DSNSVGQYYKLCRAMR-GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            + +  +     R+M   K    +  +++GL +   +  A     ++ ++G VPN  T N
Sbjct: 106 KARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYN 165

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++   C   ++  A  L   +   G  PNVVT+ST+I+ FC++ K++ A++L+  M+E 
Sbjct: 166 VLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN 225

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
             +P+L+ Y+ L+ GL + G + E  ELL    +RGL+ D   + ++M      G +  A
Sbjct: 226 GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMA 285

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF--------------------- 376
           ++ ++   NG   P+V++YS LI GLC+ GRL EAC LF                     
Sbjct: 286 LKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDG 345

Query: 377 ---------GQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
                     Q ++  +E     P+++TYSSLIDG CK+G++RD   ++  MI RG++P+
Sbjct: 346 LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 405

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + LI+G      +  AL    +      +P++  +NTL+DG C+  RA +  +LF 
Sbjct: 406 VVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFG 465

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M      PDVIT++ LI G      +  A  LF  MLK+ + PDV+T+S ++ G     
Sbjct: 466 DMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG 525

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +     + + M  +  +PD+  Y  L++   K   +  A ++  ++  RG +P+++TY 
Sbjct: 526 LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYT 585

Query: 598 TIICGYC 604
            +I  +C
Sbjct: 586 ALIDAFC 592



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 256/499 (51%), Gaps = 9/499 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I+   +  ++ E+   FA M   G   +      L++     + V + Y L + M+
Sbjct: 129 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 188

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  +++G  R+  ++ A+ + RQ+++ G +PN+VT N +L  LC NG + 
Sbjct: 189 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 248

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L D +   G +P+  ++ TL+   CK  K++ A +++      D  PD++ YS LI
Sbjct: 249 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 308

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL KAGRL E  +L     +   + DVV F+++MD       +  A Q  + M +    
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 368

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNVI+YS LI GLC+ G++ +A  +F ++++R +EP+++TY+SLI GFC +  +     L
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 428

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            + M   G  PD +  + LI+GL       +A R F         P++  ++ L+ G C+
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 488

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           L+R      LF  M    + PDV+T + L+ G  + G +  A  L  +M+    +PDV T
Sbjct: 489 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYT 548

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y++++ G  K   +     + K M + G  P++  Y  L++   +      A +L  ++ 
Sbjct: 549 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMV 608

Query: 586 DRGLEPDIITYNTIICGYC 604
             G++P++ITY ++I G+C
Sbjct: 609 GNGVQPNVITYRSLIGGFC 627



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 264/503 (52%), Gaps = 14/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS +I  + R  K+D + ++F  M + G    P+LV    L+S L  +  + + Y+L   
Sbjct: 199 YSTVIHGFCRQTKVDTAYKLFRQMVENGCM--PNLVTYNTLLSGLCRNGLMDEAYELLDE 256

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR +G       Y+ LM GL + G I+ A  +          P++V  + ++  LC  G+
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  LF+ +     +P+VVTF+ L++  CK  +L++A Q+   M + +  P++I YS 
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDGL K G++++  E+    + RG++ +VV ++S++  +     V  A+   + M   G
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP++I+Y+ LI GLC+ GR  EA  LFG +  +   P ++TYS LI GFCK  ++    
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496

Query: 409 SLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+D+M+K+ + PD V  S L+ G     L+ DA R   + V     P+++ + +L+DG 
Sbjct: 497 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 556

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C++ R  +  ++   M     +P+V+T+T LI      G  + A  L  +M+  G+ P+V
Sbjct: 557 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNV 616

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           ITY ++I G     ++     + + +ER+     D+  Y V+++ L +   + AAL+L  
Sbjct: 617 ITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLE 676

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
            +   G  P    Y  +I G C 
Sbjct: 677 AIKQSGTPPRHDIYVALIRGLCQ 699



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/581 (27%), Positives = 279/581 (48%), Gaps = 27/581 (4%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG 95
           N ++  L K  N   A+ +F+      +      +I  L +++    A+  F KM  + G
Sbjct: 98  NFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKK-G 156

Query: 96  KTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRL 153
              N +             Y+ LI  + ++ K+  +  +   M + G  L+P++V    +
Sbjct: 157 TVPNEW------------TYNVLINGFCKVHKVHRAYLLLKEMKESG--LAPNVVTYSTV 202

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +        V   YKL R M   G       Y  L++GL R G+++ A+ +  ++ +RG 
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 262

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P+  + + ++  LC  G+I  A  +F+        P+VV +STLI   CK  +L++A +
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACK 322

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L+  M E    PD++ ++ L+DGL K  RL+E  ++L T  DR    +V+ +SS++D   
Sbjct: 323 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 382

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G V  A + + RM+  G  PNV++Y+ LI G C    +  A  L  ++      P ++
Sbjct: 383 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 442

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSV 445
           TY++LIDG CK+G+  +   L+ +M  +   PD +  S LI G       D  R  F  +
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 502

Query: 446 -RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            +  ++P++  F+TL++G C      D  +L   M   +  PDV T+T L+ G    G +
Sbjct: 503 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 562

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  +  +M KRG  P+V+TY+A+I    +    +V   + + M  NGV P++  Y  L
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622

Query: 565 LNMLIKECNLDAALKLFGQLT-DRGLEPDIITYNTIICGYC 604
           +       +L+ A K+  +L  D   + D+  Y  ++ G C
Sbjct: 623 IGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLC 663



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 222/453 (49%), Gaps = 35/453 (7%)

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           + D ++  +++      +G    VY +  L   LLR   I+   H+ +     G  PN+ 
Sbjct: 1   MSDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVF 60

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T   +++ LC +G +  A  L + +   GP P+   ++ +I+A CK     KA   +   
Sbjct: 61  TYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFR-- 118

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
             M+   ++I ++I+IDGL KA RL E          +G   +   ++ +++ +  +  V
Sbjct: 119 -SMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKV 177

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
            RA      M   G  PNV++YS +I G C+Q ++  A  LF Q++     P+L+TY++L
Sbjct: 178 HRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 237

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           + G C++G + + + L D M +RGL+                              P+ F
Sbjct: 238 LSGLCRNGLMDEAYELLDEMRERGLQ------------------------------PDKF 267

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            ++TLM G C+  +    +K+F      +  PDV+ ++ LI G+   G L  A  LF +M
Sbjct: 268 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM 327

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            +    PDV+T++A++ GL KG  +     + + ME     P++  Y+ L++ L K   +
Sbjct: 328 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 387

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             A ++F ++  RG+EP+++TYN++I G+C  N
Sbjct: 388 RDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 420



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 226/460 (49%), Gaps = 19/460 (4%)

Query: 93  QFGKTYNFFRLFRD-SLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           + GK     ++F D S GD   D   YS LI    + G++DE+ ++F  M +      PD
Sbjct: 278 KTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSC--EPD 335

Query: 149 LVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHR 202
           +V    LM  L   + + +  ++   M  +        Y  L++GL + G + +A  + +
Sbjct: 336 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 395

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++I RG  PN+VT N ++   C+   + +A  L + +   G  P+++T++TLI+  CK  
Sbjct: 396 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG 455

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +  +A +L+  M      PD+I YS LI G  K  R+     L    L + +  DVV FS
Sbjct: 456 RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFS 515

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           ++++ Y   G V  A +  + M+     P+V +Y+ L+ G C+ GR+VEA  +  ++  R
Sbjct: 516 TLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR 575

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DAL 438
             +P+++TY++LID FC++GK    + L + M+  G++P+ +    LI G  G    +  
Sbjct: 576 GCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 635

Query: 439 RFFFQSVRM--TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           R   + +        ++F +  +MDG CR  R +  ++L   +      P    +  LIR
Sbjct: 636 RKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIR 695

Query: 497 GIASQGSLSSAILLFFQM-LKRGLTPDVITYSAIIHGLFK 535
           G+     L  A+ +  +M L R   P+   Y A+I  L +
Sbjct: 696 GLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAR 735



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 40/313 (12%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G+     RLF D    F C+     YS LI  + ++ +ID +  +F  M    +   P
Sbjct: 453 KTGRAPEANRLFGDMKAKF-CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL--P 509

Query: 148 DLV------------------QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
           D+V                  +RL+  +V S+     Y             Y  L++G  
Sbjct: 510 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY------------TYTSLVDGFC 557

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           + G +  A  + +++ +RG  PN+VT   ++   C  G+   A  L + ++  G +PNV+
Sbjct: 558 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVI 617

Query: 250 TFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           T+ +LI  FC    LE+A + L  L  + +   D+  Y +++DGL + GR+    ELL  
Sbjct: 618 TYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA 677

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM-LNGGFLPNVISYSILIKGLCQQG 367
               G      ++ +++       ++G+A++  + M L+    PN  +Y  +I+ L ++G
Sbjct: 678 IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREG 737

Query: 368 RLVEACGLFGQVL 380
           R  EA  L  ++L
Sbjct: 738 RHEEANALADELL 750


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 158/519 (30%), Positives = 265/519 (51%), Gaps = 16/519 (3%)

Query: 100 FFRLFRDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LM 154
           F+++++  LG    D   Y+ LI  Y R+GK++E   +   M + G    P+LV    ++
Sbjct: 217 FWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCI--PNLVTYSVVI 274

Query: 155 SCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
           + L  +  V +  +L R+M  KG      +Y  L++G  R+        M  ++   G  
Sbjct: 275 AGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLK 334

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+ V    ++        IG A  + + +     K N  T+  LI+  CK   LEKA  L
Sbjct: 335 PDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDL 394

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           ++ M  M + PD+  Y+ LI+G +K   +++  ELL+      L  +  +  ++++    
Sbjct: 395 FSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCH 454

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            GD+ RA + +  M++ G  PN++ Y+ ++KGL ++GR  EA  + G +  + L P +  
Sbjct: 455 CGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFC 514

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           Y+++I GFCK+GK+ +G S    MI +GLKP+       I+G      M  A R F + +
Sbjct: 515 YNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEML 574

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              + PN  I   L+DG C+    T     F  M    + PDV TH+VLI G++  G L 
Sbjct: 575 DSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQ 634

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ +F ++L +GL PDV TY+++I  L K  ++     +   M + G+ P+I  YN L+
Sbjct: 635 EAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALI 694

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N L K   +  A +LF  + ++GL  + +TY+TII GYC
Sbjct: 695 NGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYC 733



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 257/504 (50%), Gaps = 22/504 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLC 170
           Y  LI    +IG ++++ ++F+ M+ MGI   PD+  +  +CL++      ++ + Y+L 
Sbjct: 375 YYALIHGLCKIGDLEKAEDLFSEMTMMGI--KPDI--QTYNCLIEGYYKVQNMEKAYELL 430

Query: 171 RAMRGKGFCVYEFL----MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             ++ +      ++    +NGL   G +  A  + +++I  G  PNIV    I+K L   
Sbjct: 431 IEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKE 490

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+   A  +  V+   G  P+V  ++T+I  FCK  K+E+       M+   L P++  Y
Sbjct: 491 GRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTY 550

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
              I G  +AG ++      +  LD G+  + V+ + ++D Y   G+  +A   +  ML+
Sbjct: 551 GAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLD 610

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G LP+V ++S+LI GL + G+L EA G+F ++L + L P + TY+SLI   CK G L+ 
Sbjct: 611 QGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKA 670

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            F L+D+M K+G+ P+ V  + LINGL     +  A   F       L  N   ++T++ 
Sbjct: 671 AFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIA 730

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL-- 519
           G C+    T+  +LF  M +  + PD   +  LI G    G+   A+ LF  M++ G+  
Sbjct: 731 GYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAS 790

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
           TP    ++A+I G FK   +     + + M  N + P+   Y +L+       N+  A +
Sbjct: 791 TP---AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQ 847

Query: 580 LFGQLTDRGLEPDIITYNTIICGY 603
           LF ++  R + P+++TY +++ GY
Sbjct: 848 LFMEMQKRNVMPNVLTYTSLLHGY 871



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 247/499 (49%), Gaps = 37/499 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +++  V+ G+ +E+++I   M D G  LSPD+                         
Sbjct: 480 YTTIVKGLVKEGRFEEAIKILGVMKDQG--LSPDV------------------------- 512

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
              FC Y  ++ G  + G +E       ++I +G  PN+ T    +   C  G++  A  
Sbjct: 513 ---FC-YNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            F  +L  G  PN V  + LI+ +CK+    KAF  +  M++  ++PD+  +S+LI GL 
Sbjct: 569 SFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLS 628

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G+L+E   +    LD+GL  DV  ++S++      GD+  A + +D M   G  PN++
Sbjct: 629 KNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIV 688

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI GLC+ G + +A  LF  +  + L  + +TYS++I G+CKS  L + F L+  M
Sbjct: 689 TYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM 748

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
              G+ PD+ V   LI+G         AL  F   V    I +   FN L+DG  +L + 
Sbjct: 749 KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKL 807

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  +L   M   +I P+ +T+T+LI    + G++  A  LF +M KR + P+V+TY+++
Sbjct: 808 IEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSL 867

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           +HG  +    S    +F  M   G+ PD   ++V+++  +KE N   ALKL   +   G+
Sbjct: 868 LHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGV 927

Query: 590 EPDIITYNTIICGYCSLNS 608
                 Y  +I   C  N+
Sbjct: 928 NVCKNLYTILIDALCKHNN 946



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 230/530 (43%), Gaps = 72/530 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  LI+ Y + G ++E+V +F         +       L   L+  N V  ++K+ + M 
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G                                  VP++ T   ++   C  G++     
Sbjct: 226 G--------------------------------AIVPDVYTYTNLINAYCRVGKVEEGKH 253

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +   G  PN+VT+S +I   C+   +++A +L   M    L+PD  IY+ LIDG  
Sbjct: 254 VLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFC 313

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           +  R  EG  +L      GLK D V ++++++ +V   D+G A Q  + M       N  
Sbjct: 314 RQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTF 373

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y  LI GLC+ G L +A  LF ++ +  ++P + TY+ LI+G+ K   +   + L   +
Sbjct: 374 TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI 433

Query: 415 IKRGLKPDAVVCSLLINGL--MGDALR---FFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            K  L  +A +C  ++NGL   GD  R    F + +   L PN+ I+ T++ G  +  R 
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            + +K+  +M    + PDV  +  +I G    G +        +M+ +GL P+V TY A 
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAF 553

Query: 530 IH-----------------------------------GLFKGKNISVGLHMFKLMERNGV 554
           IH                                   G  K  N +     F+ M   GV
Sbjct: 554 IHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGV 613

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            PD+  ++VL++ L K   L  A+ +F +L D+GL PD+ TY ++I   C
Sbjct: 614 LPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLC 663



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 176/418 (42%), Gaps = 80/418 (19%)

Query: 118  LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
            LI+ Y + G   ++   F  M D G+         L+  L  +  + +   +   +  KG
Sbjct: 588  LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647

Query: 178  FC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                   Y  L++ L ++G ++ AF +H  + ++G  PNIVT N ++  LC  G+I  A 
Sbjct: 648  LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAR 707

Query: 234  SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY------- 286
             LFD +   G   N VT+ST+I  +CK A L +AFQL++ M  + + PD  +Y       
Sbjct: 708  ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767

Query: 287  ---------------------------SILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
                                       + LIDG FK G+L E  +L+   +D  +  + V
Sbjct: 768  CKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHV 827

Query: 320  VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
             ++ +++ +  +G++  A Q +  M     +PNV++Y+ L+ G  + GR  E   LF ++
Sbjct: 828  TYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEM 887

Query: 380  LIRRLEPSLLTYSS-----------------------------------LIDGFCKSGKL 404
            + R ++P  L +S                                    LID  CK   L
Sbjct: 888  VARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNL 947

Query: 405  RDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFN 457
             +   + D + K+G K     C  L+      G   +ALR     VR  L  NL  F+
Sbjct: 948  SEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRSFL--NLLEFS 1003



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 28/256 (10%)

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-GDALRFFFQSVRMTL 449
           +  LID + K G L +  S++              C+ L   L+ G+ +  F++  +  L
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225

Query: 450 ---IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              +P+++ +  L++  CR+ +  +   +   M      P+++T++V+I G+   G +  
Sbjct: 226 GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDE 285

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A+ L   M  +GL PD   Y+ +I G  + K  + G  M   M   G+ PD   Y  L+N
Sbjct: 286 ALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALIN 345

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN------------------- 607
             +K+ ++  A ++  ++  R ++ +  TY  +I G C +                    
Sbjct: 346 GFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKP 405

Query: 608 -----SCLIDGYFKSQ 618
                +CLI+GY+K Q
Sbjct: 406 DIQTYNCLIEGYYKVQ 421


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 150/500 (30%), Positives = 264/500 (52%), Gaps = 9/500 (1%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           DY  +  N +   K+D++V +F  M     + S     +L+S +   N       L   M
Sbjct: 48  DYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 107

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           +  G       Y  L+N   R+  +  A  +  ++++ G+ P+IVT N +L   C   +I
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A SL   ++ +G +P+  TF+TLI+   +  +  +A  L + M+     PDL+ Y I+
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++GL K G +     LL       ++  VV++++++DA     +V  A+  +  M N G 
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            PNV++Y+ LI+ LC  GR  +A  L   ++ R++ P+++T+S+LID F K GKL +   
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           LYD MIKR + PD    S LING      + +A   F   +     PN+  +NTL+ G C
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           + KR  + ++LF  M    +  + +T+T LI G        +A ++F QM+  G+ PD++
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TYS ++ GL     +   L +F+ ++R+ + PDI  YN+++  + K   ++    LF  L
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527

Query: 585 TDRGLEPDIITYNTIICGYC 604
           + +G++P+++TY T++ G+C
Sbjct: 528 SLKGVKPNVVTYTTMMSGFC 547



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 277/573 (48%), Gaps = 39/573 (6%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
           S   ++DL+ + A  +  +++K+  P P+I  F    + ++  N   L+ + L   M+++
Sbjct: 53  SINRLNDLKLDDAVNLFGDMVKSR-PFPSIVEFSKLLSAIAKMNKFDLV-ISLGEQMQNL 110

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
                       G ++N +             YS LI  + R  ++  ++ + A M  +G
Sbjct: 111 ------------GISHNLYT------------YSILINCFCRRSQLSLALAVLAKMMKLG 146

Query: 143 IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIEN 196
               PD+V    L++     N +     L   M   G+    F    L++GL R      
Sbjct: 147 --YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASE 204

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  +  +++ +G  P++VT   ++  LC  G I  A SL   +     +P VV ++T+I+
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           A C    +  A  L+  M    + P+++ Y+ LI  L   GR  + + LL   ++R +  
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV FS+++DA+V  G +  A + YD M+     P++ +YS LI G C   RL EA  +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-- 434
             ++ +   P+++TY++LI GFCK+ ++ +G  L+  M +RGL  + V  + LI+G    
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444

Query: 435 ---GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
               +A   F Q V   ++P++  ++ L+DG C   +    + +F  +    ++PD+ T+
Sbjct: 445 RECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            ++I G+   G +     LF  +  +G+ P+V+TY+ ++ G  +         +F+ M+ 
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            G  PD   YN L+   +++ +  A+ +L  ++
Sbjct: 565 EGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 228/460 (49%), Gaps = 9/460 (1%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L+  +    +I ++V +   M +MG          L+  L   N   +   L   M  KG
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216

Query: 178 ----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  ++NGL ++G I+ A  + +++ Q    P +V  N I+  LC    + +A 
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           +LF  +   G +PNVVT+++LI   C   +   A +L + M+E  + P+++ +S LID  
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G+L E  +L    + R +  D+  +SS+++ +     +  A   ++ M++    PNV
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ LIKG C+  R+ E   LF ++  R L  + +TY++LI GF ++ +  +   ++  
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456

Query: 414 MIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M+  G+ PD +  S+L++GL  +     AL  F    R  + P+++ +N +++G C+  +
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             D   LF  + +  +KP+V+T+T ++ G   +G    A  LF +M + G  PD  TY+ 
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           +I    +  + +    + + M       D +   ++ NML
Sbjct: 577 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 212/417 (50%), Gaps = 5/417 (1%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +++A ++   +++    P+IV  +K+L  +    +     SL + +  +G   N+ T+S 
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LIN FC+ ++L  A  +   MM++   PD++  + L++G     R+ +   L+   ++ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            + D   F++++           AV   DRM+  G  P++++Y I++ GLC++G +  A 
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
            L  ++   ++EP ++ Y+++ID  C    + D  +L+  M  +G++P+ V  + LI   
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 432 ---GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
              G   DA R     +   + PN+  F+ L+D   +  +  +  KL+  M   +I PD+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
            T++ LI G      L  A  +F  M+ +   P+V+TY+ +I G  K K +  G+ +F+ 
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           M + G+  +   Y  L++   +    D A  +F Q+   G+ PDI+TY+ ++ G C+
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 198/387 (51%), Gaps = 5/387 (1%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ +A +LF  ++   P P++V FS L++A  K  K +    L   M  + +  +L  YS
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ILI+   +  +L     +L   +  G + D+V  +S+++ +     +  AV    +M+  
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G+ P+  +++ LI GL +  R  EA  L  +++++  +P L+TY  +++G CK G +   
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            SL   M +  ++P  V+ + +I+ L     + DAL  F +     + PN+  +N+L+  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C   R +D  +L   M    I P+V+T + LI     +G L  A  L+ +M+KR + PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           + TYS++I+G      +    HMF+LM      P++  YN L+    K   +D  ++LF 
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSC 609
           +++ RGL  + +TY T+I G+     C
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQAREC 447



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 212/477 (44%), Gaps = 57/477 (11%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVR 124
           LIH L + +    A  + D+MV++                  GC      Y  ++    +
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVK------------------GCQPDLVTYGIVVNGLCK 233

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CV 180
            G ID ++ +   M    I     +   ++  L +  +V     L   M  KG       
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+  L   G   +A  +   +I+R   PN+VT + ++      G++  A  L+D ++
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                P++ T+S+LIN FC   +L++A  ++ LM+  D  P+++ Y+ LI G  KA R+ 
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           EG EL      RGL  + V +++++  +    +   A   + +M++ G LP++++YSIL+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC  G++  A  +F  +   ++EP + TY+ +I+G CK+GK+ DG+ L+         
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF--------- 524

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
                CSL + G+                 PN+  + T+M G CR     +   LF  M 
Sbjct: 525 -----CSLSLKGVK----------------PNVVTYTTMMSGFCRKGLKEEADALFREMK 563

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
                PD  T+  LIR     G  +++  L  +M       D  T   + + L  G+
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGR 620


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/467 (32%), Positives = 254/467 (54%), Gaps = 16/467 (3%)

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +S L  ++ +G    +   MR  GF      Y  L++GL   G + +A  ++ ++I+ G+
Sbjct: 57  ISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGY 116

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P++VT N +L   C  G++  A  +FD  +  G  P+VVT++ LIN FCK  KL++A +
Sbjct: 117 SPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQR 176

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +   M+   LVPD++ Y+ L++GL K GR+ E   L++   D+G   +V+ +S+++    
Sbjct: 177 ILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLC 233

Query: 330 -GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             +  +  A Q  ++M+  G  P+++SY+ LI GL ++  + EA  LFG VL +  EP +
Sbjct: 234 RELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEV 293

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
            TY+ LIDG  K  ++ + F L+  ++K GL+PDA+  ++ I+GL     + DAL     
Sbjct: 294 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 353

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                 +P++   N +++G C+ KR  +   L   M      P+ I+   LI G    G 
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN---ISVGLHMFKLMERNGVAPDIAI 560
              A+  F +MLKRG+ P V+TY+ ++ GL K +    I   + +F  M   G  PD+  
Sbjct: 414 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 473

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           Y+ L++ L K   LD A +L G +  +G  P++ TYN++I G C L+
Sbjct: 474 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLD 520



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 251/482 (52%), Gaps = 20/482 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+  + ++GK+DE+++IF      G    PD+V    L++    ++ + +  ++ + 
Sbjct: 123 YNTLLHGFCKVGKLDEALKIFDGAVKRGFV--PDVVTYNALINGFCKADKLDEAQRILQR 180

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN-G 227
           M  +        Y  L+NGL + G ++ A  +   ++ +GF PN++T + ++  LC    
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELR 237

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ +A  L + ++L G KP++V+++ LI+   +E  + +A +L+  ++     P++  Y+
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ILIDGL K  R+ E  EL    +  GL+ D + ++  +D     G V  A+     M   
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +P+V+S++ +I GLC++ R+ EA  L   +  +   P+ +++++LI G C++GK +  
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 417

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL--------MGDALRFFFQSVRMTLIPNLFIFNTL 459
            + +  M+KRG+KP  V  ++L++GL        + +A+  F   +    +P++  ++ L
Sbjct: 418 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 477

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG  +  +  D  +L   M      P+V T+  LI G+     +  A+ LF  M+++G 
Sbjct: 478 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGC 537

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PD ITY  II  L K + +   L +F      GV P   +Y  L++ L     +D ALK
Sbjct: 538 VPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALK 597

Query: 580 LF 581
           L 
Sbjct: 598 LL 599



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 221/415 (53%), Gaps = 14/415 (3%)

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
            H     + R + P+  T   +L+ L  +G+I  A    + LL+ G   ++ TF+  I+ 
Sbjct: 1   MHTVYDKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISG 59

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
            C+ +++  A  +++ M +    P+ I Y+ L+ GL   GR+ +   L    +  G   D
Sbjct: 60  LCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPD 119

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           VV +++++  +  +G +  A++ +D  +  GF+P+V++Y+ LI G C+  +L EA  +  
Sbjct: 120 VVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQ 179

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
           +++   L P ++TY+SL++G CK+G++ +   L   ++ +G  P+ +  S LI+GL  + 
Sbjct: 180 RMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCREL 236

Query: 438 LRFFFQSVRMTL--------IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
            R   +S R  L         P++  +N L+ G  R +  ++ +KLF  +     +P+V 
Sbjct: 237 RRL--ESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVP 294

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+ +LI G+  +  ++ A  LF  ++K GL PD ITY+  I GL K   +   L M K M
Sbjct: 295 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 354

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  G  PD+  +N ++N L KE  +D A  L   +  +G  P+ I++NT+ICG C
Sbjct: 355 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 409



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 133/294 (45%), Gaps = 20/294 (6%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMR----DVASH- 85
           + N+A  + + L+K      AI +  +      +  +   + +L   D +    DV SH 
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 367

Query: 86  -VFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMS 139
            V + +  +  K  +   +    +   GC      ++ LI    R GK  +++  F  M 
Sbjct: 368 AVINGLCKE--KRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 425

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYK---LCRAMRGKG----FCVYEFLMNGLLRKG 192
             G+  +      L+  L  +   G+  +   L  AM  KG       Y  L++GL + G
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 485

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            +++A  +   +  +G +PN+ T N ++  LC   ++  A  LF  ++  G  P+ +T+ 
Sbjct: 486 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYG 545

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           T+I+A CK+  ++KA  L++  +E  +VP   +Y  LIDGL    R+ E  +LL
Sbjct: 546 TIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLL 599



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PD  T  +L+R +   G +  A     Q+L +GL  D+ T++  I GL +   I     +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           F  M ++G  P+   YN LL+ L     +  A  L+ ++   G  PD++TYNT++ G+C 
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 606 L 606
           +
Sbjct: 133 V 133


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/583 (26%), Positives = 292/583 (50%), Gaps = 27/583 (4%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N +L    K N    A+   +        P++     +I+ L + D  D A  V DKM I
Sbjct: 83  NTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM-I 141

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           Q G   N               Y  L++ + R+G +D +VE+   M++ G   +      
Sbjct: 142 QRGCQPNVIT------------YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 189

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           +M  L     +    +L + M   G C      Y  +++ L++ G +++A  +   ++ +
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK 249

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  PN+VT + +L  LC  G++  A++L   +   G  PN+VT++T+I+  CK  ++++A
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           + L   M++    P+++ Y++L+D   K G+ ++   L+   +++G   ++  ++S++D 
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +    +V RA Q    M+  G +PNV+SY+ +I GLC+  ++ E   L  Q+L     P 
Sbjct: 370 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 429

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQ 443
           ++T++++ID  CK+ ++   + L++ + + G  P+ V  + L++GL      D   +  +
Sbjct: 430 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 489

Query: 444 SV--RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +  +    P++  +NT++DG C+ KR     KLF+ M    + PD +T++++I  +   
Sbjct: 490 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 549

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
             +  A  +   MLK G  P  ITY  +I G  K  N+   L + +L+   G  PD+  +
Sbjct: 550 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 609

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           ++ ++ L K   L  A +L   +   GL PD +TYNT++ G+C
Sbjct: 610 SIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 652



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 252/472 (53%), Gaps = 20/472 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS ++++ V+ GK+D++  +   M   G   SP++V    L+  L  +  + +   L + 
Sbjct: 223 YSTIVDSLVKSGKVDDACRLVEAMVSKGC--SPNVVTYSSLLHGLCKAGKLDEATALLQR 280

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  +++G  + G I+ A+H+  +++  G  PN+VT   +L   C  G+
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             +A  L +V++  G  PN+ T+++L++ FCK+ ++E+A QL + M++   VP+++ Y+ 
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 400

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I GL KA ++ EG  LL   L      D+V F++++DA      V  A + ++ +   G
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 460

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDG 407
             PN+++Y+ L+ GLC+  R  +A  L  ++  ++   P ++TY+++IDG CKS ++   
Sbjct: 461 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 520

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           + L+  M+  GL PD V  S++I+ L     M +A       ++    P    + TL+DG
Sbjct: 521 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 580

Query: 463 CCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
            C+   L +A + ++L +  G Y   PDV+T ++ I  ++ +G L  A  L   ML+ GL
Sbjct: 581 FCKTGNLDKALEILQLLLSKGSY---PDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 637

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            PD +TY+ ++ G          + +F++M + G  PD A Y  L+  L+ +
Sbjct: 638 VPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDK 689



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 234/466 (50%), Gaps = 42/466 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ ++ GL   G   +A  +H + + +   P+ VT N ++  L  + ++ +A  L + +
Sbjct: 12  VHKSILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 70

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PNV +++T+++ FCK  ++E A  L   M+     PD++ Y+ +I+GL K  ++
Sbjct: 71  VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   ++   + RG + +V+ + +++D +  +GD+  AV+   +M   G+ PN I+Y+ +
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190

Query: 360 IKGLCQQGRLVEACGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           + GLC   +L  A  LF ++       P + TYS+++D   KSGK+ D   L + M+ +G
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             P+ V  S L++GL     + +A     +  R    PN+  +NT++DG C+L R  +  
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI------------------------- 508
            L   M     +P+V+T+TVL+      G    AI                         
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370

Query: 509 ----------LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                      L   M+++G  P+V++Y+ +I GL K   +  G+ + + M  N   PDI
Sbjct: 371 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDI 430

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             +N +++ + K   +D A +LF  + + G  P+++TYN+++ G C
Sbjct: 431 VTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 476



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 192/368 (52%), Gaps = 7/368 (1%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G K +     +++   C   +   A  L+   M     PD + Y+ +I+GL K+ RL + 
Sbjct: 5   GLKAHAGVHKSILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDRLDDA 63

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             LL   +D G   +V  +++V+  +     V  A+   ++M+  G  P+V+SY+ +I G
Sbjct: 64  IRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVING 123

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC+  ++ EAC +  +++ R  +P+++TY +L+DGFC+ G L     L   M +RG +P+
Sbjct: 124 LCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPN 183

Query: 423 AVVCSLLINGL-----MGDALRFFFQ-SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           A+  + +++GL     +  AL+ F +     +  P++F ++T++D   +  +  D  +L 
Sbjct: 184 AITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLV 243

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M      P+V+T++ L+ G+   G L  A  L  +M + G +P+++TY+ II G  K 
Sbjct: 244 EAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL 303

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             I    H+ + M   G  P++  Y VLL+   K    + A+ L   + ++G  P++ TY
Sbjct: 304 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTY 363

Query: 597 NTIICGYC 604
           N+++  +C
Sbjct: 364 NSLLDMFC 371



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 158/301 (52%), Gaps = 7/301 (2%)

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           +GLK    V  S++      G    AV  + R ++    P+ ++Y+ +I GL +  RL +
Sbjct: 4   KGLKAHAGVHKSILRGLCDAGQCSDAVLHF-REMSKTCPPDSVTYNTMINGLSKSDRLDD 62

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  L  +++     P++ +Y++++ GFCK+ ++ +   L + M+ RG  PD V  + +IN
Sbjct: 63  AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVIN 122

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           GL     + +A R   + ++    PN+  + TL+DG CR+      V+L   M     +P
Sbjct: 123 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 182

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRG-LTPDVITYSAIIHGLFKGKNISVGLHM 545
           + IT+  ++ G+ S   L SA+ LF +M + G   PDV TYS I+  L K   +     +
Sbjct: 183 NAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRL 242

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            + M   G +P++  Y+ LL+ L K   LD A  L  ++T  G  P+I+TYNTII G+C 
Sbjct: 243 VEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCK 302

Query: 606 L 606
           L
Sbjct: 303 L 303



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/490 (22%), Positives = 220/490 (44%), Gaps = 70/490 (14%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMV- 91
           + I+ +L+K+     A +  +   +   SPN+   + L+H L ++   D A+ +  +M  
Sbjct: 224 STIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR 283

Query: 92  -----------------IQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKID 129
                             + G+    + L  + + D GC      Y+ L++ + + GK +
Sbjct: 284 SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV-DGGCQPNVVTYTVLLDAFCKCGKAE 342

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFL 184
           +++ +   M + G   +      L+      + V +  +L  +M  KG CV     Y  +
Sbjct: 343 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG-CVPNVVSYNTV 401

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           + GL +   +     +  Q++    VP+IVT N I+  +C   ++  A  LF+++   G 
Sbjct: 402 IAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC 461

Query: 245 KPNVVTFSTLINAFCKEAKLEKA-FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            PN+VT+++L++  CK  + ++A + L  +  +    PD+I Y+ +IDGL K+ R+    
Sbjct: 462 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 521

Query: 304 ELLLTALDRGLKLDVVVFS-----------------------------------SVMDAY 328
           +L L  L  GL  D V +S                                   +++D +
Sbjct: 522 KLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGF 581

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G++ +A++    +L+ G  P+V+++SI I  L ++GRL +A  L   +L   L P  
Sbjct: 582 CKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDT 641

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-DALRFFFQSVRM 447
           +TY++L+ GFC + +  D   L++ M + G +PD    + L+  L+   + +     V  
Sbjct: 642 VTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSK 701

Query: 448 TLIPNLFIFN 457
           +++   F  N
Sbjct: 702 SMVDTGFKLN 711



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 6/197 (3%)

Query: 414 MIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M ++GLK  A V   ++ GL       DA+   F+ +  T  P+   +NT+++G  +  R
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDR 59

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             D ++L   M      P+V ++  ++ G      + +A+ L  QM+ RG  PDV++Y+ 
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+GL K   +     +   M + G  P++  Y  L++   +  +LD A++L  ++T+RG
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 589 LEPDIITYNTIICGYCS 605
             P+ ITYN I+ G CS
Sbjct: 180 YRPNAITYNNIMHGLCS 196



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 1/129 (0%)

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    +K     H  ++RG+   G  S A+L F +M K    PD +TY+ +I+GL K   
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   + + + M  NG AP++  YN +L+   K   ++ AL L  Q+  RG  PD+++Y T
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 599 IICGYCSLN 607
           +I G C L+
Sbjct: 120 VINGLCKLD 128


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/606 (26%), Positives = 287/606 (47%), Gaps = 40/606 (6%)

Query: 42  LIKTNNPTPAIQFFKW-----------THNCV--------SSPNIAQLIHVLLQSDMR-- 80
           L +  +P  AI FF W           T NC         SS  I  +   +L +     
Sbjct: 100 LQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPD 159

Query: 81  DVASHVFDKMVIQFGKTYNFFRLF-RDSLGDFGCD---YSFLIENYVRIGKIDESVEIFA 136
               H+  K + Q  +    F +  +  +  F  +   Y+ L   + + G++ +++EIF 
Sbjct: 160 SYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFR 219

Query: 137 YMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLR 190
            +       SPD +    ++      N      +  + M  +        Y  L++GL +
Sbjct: 220 NIP------SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCK 273

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
               + A  M  +++ RG  P+ VT N I+  LC  G+   A SL  V+     +P+  T
Sbjct: 274 ASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCT 333

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           ++TLI+  CK+  +++A  L +  +    VPD++ YSIL DGL K GR+ E  EL+    
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
            +G   ++V +++++D         +A +  + +++ GF+P+V++Y+I++ GLC++GRL 
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLD 453

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           +A  +   +L R   PS++TY++L++G C++G++ +   ++  M+ +    DA+    L+
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 513

Query: 431 NGLMGDALRFFFQSV--RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
           NG    +     Q V   +   P + ++N LMDG C+  R  +   +F  M      P++
Sbjct: 514 NGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 573

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
            T+ +++ G+   G +  A      M   G  PDV++Y+ II GLFK         +   
Sbjct: 574 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 633

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           M + G+ PD   YN L+    KE   D A+ +   +   G++PD +TYNT+I G    N 
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693

Query: 609 CLIDGY 614
            L D Y
Sbjct: 694 -LGDAY 698



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 244/565 (43%), Gaps = 106/565 (18%)

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLC--RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHR 202
           L P +V R++  L D  +   ++     R  +   F    FL   LL  G  +    M  
Sbjct: 91  LQPAVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQT-LLENGSSDRIPAMFE 149

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +++  G+ P+  T + ++K LC   QI  A ++ D   + G KP V  ++ L  AFCK  
Sbjct: 150 RMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTG 209

Query: 263 KLEKAFQL-----------YNL--------------------MMEMDLVPDLIIYSILID 291
           +L+ A ++           YN                     M E  + PD+  Y+ILID
Sbjct: 210 RLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILID 269

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG------------------- 332
           GL KA +  + +E+L   +DRG+  D V F+S+MD     G                   
Sbjct: 270 GLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRP 329

Query: 333 ----------------DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
                           +V RA    D  ++ GF+P+V++YSIL  GLC++GR+ EA  L 
Sbjct: 330 SCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELV 389

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            ++  +   P+L+TY++LIDG CK+ K    + L ++++  G  PD V  +++++GL   
Sbjct: 390 KEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKE 449

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             +  AL+     ++    P++  +  LM+G CR  R  +   +F  M   +   D + +
Sbjct: 450 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAY 509

Query: 492 TVLIR--------------------------------GIASQGSLSSAILLFFQMLKRGL 519
             L+                                 G   +G L     +F  M  RG 
Sbjct: 510 VSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGC 569

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P++ TY+ ++ GL K   +       + M   G  PD+  YN++++ L K      A +
Sbjct: 570 VPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQ 629

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           +  Q+   G+ PD +TYNT++  +C
Sbjct: 630 VLDQMIQAGIPPDAVTYNTLMAQFC 654



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 157/653 (24%), Positives = 285/653 (43%), Gaps = 97/653 (14%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           NAI+    + N+   A++F K  +    +P++     LI  L ++   D AS +  +MV 
Sbjct: 230 NAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD 289

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           + G T +               ++ +++   + GK + +  + A M++     S      
Sbjct: 290 R-GVTPDTVT------------FNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNT 336

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+S L    +V +   L       GF      Y  L +GL ++G I+ AF + +++  +G
Sbjct: 337 LISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKG 396

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN+VT N ++  LC   +   A  L + L+  G  P+VVT++ +++  CKE +L+KA 
Sbjct: 397 CTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKAL 456

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           ++   M++    P +I Y+ L++GL + GR+ E + +    + +    D + + S+++ Y
Sbjct: 457 KMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGY 516

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
                   A +  D +      P +  Y+ L+ G C++GRL E   +F  +  R   P++
Sbjct: 517 CKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 573

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQ 443
            TY+ ++DG CK GK+ + F   ++M   G  PD V  +++I+GL       +A +   Q
Sbjct: 574 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 633

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS--- 500
            ++  + P+   +NTLM   C+ +R  D V +   M    + PD +T+  LI G++    
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693

Query: 501 ---------------------------------QGSLSSAILLFFQMLKRGLTPDVITYS 527
                                            +G L  A+LL   M   G+  + +TY+
Sbjct: 694 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 753

Query: 528 AIIHGLFKGKNIS----------------------VGLHMFKLMER-----------NGV 554
             I  L K   +                       +GL   + ++R            G+
Sbjct: 754 IFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 813

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
                 +N+L++   K   LD AL L G +  RG  P +ITYN +I   C L+
Sbjct: 814 CITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLD 866



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 133/565 (23%), Positives = 236/565 (41%), Gaps = 110/565 (19%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS L +   + G+IDE+ E+   MS  G   +P+LV    L+  L  ++   + Y+L  +
Sbjct: 369 YSILADGLCKRGRIDEAFELVKEMSGKGC--TPNLVTYNTLIDGLCKASKTEKAYELLES 426

Query: 173 MRGKGFC---------------------------------------VYEFLMNGLLRKGV 193
           +   GF                                         Y  LM GL R G 
Sbjct: 427 LVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGR 486

Query: 194 IENAFHMHRQVIQR--------------GF------------------VPNIVTCNKILK 221
           ++ A H+ ++++ +              G+                   P I   N ++ 
Sbjct: 487 VDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMD 546

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
             C  G++    ++F+ +   G  PN+ T++ +++  CK  K+++AF     M     VP
Sbjct: 547 GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVP 606

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D++ Y+I+IDGLFKA + KE  ++L   +  G+  D V ++++M  +        AV   
Sbjct: 607 DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL 666

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCK 400
             M+  G  P+ ++Y+ LI GL Q  RL +A  L  ++L    +  +  TY+++ID  CK
Sbjct: 667 KNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCK 726

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLM 460
            G L+    L D+M   G++ + V                               +N  +
Sbjct: 727 EGCLKQALLLMDHMTGHGVEANTVT------------------------------YNIFI 756

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK-RGL 519
           D  C+  R  +   L   M       D +++T +I G+     L  A  L  +M+  +GL
Sbjct: 757 DRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 813

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
                T++ +I    K K +   L +  LM + G +P +  YN+++  L K   +D A +
Sbjct: 814 CITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWE 873

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           LF ++  RG+    ++Y  +I G C
Sbjct: 874 LFDEMAVRGIVASSVSYTVLIYGLC 898


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 150/441 (34%), Positives = 243/441 (55%), Gaps = 16/441 (3%)

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR  GF      Y  L++GL   G + +A  ++ ++I+ G+ P++VT N +L   C  G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +FD  +  G  P+VVT++ LIN FCK  KL++A ++   M+  +LVPD++ Y+ 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV-GIGDVGRAVQTYDRMLNG 347
           L++GL K GR+ E   L+   +D+G   +V+ +S+++      +  V  A++ +  +L  
Sbjct: 121 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G+ P V +Y+ILI GL ++ R+ EA  LF  ++   LEP  +TY+  IDG CK+G++ D 
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMT-LIPNLFIFNTLMDG 462
             +  +M ++G  PD V  + +INGL      D        +      PN   FNTL+ G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA---SQGSLSSAILLFFQMLKRGL 519
            CR  +    +  F  M    +KP V+T+ +L+ G+     +G +  AI LF  M+++G 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PDV+TYSA+I GL K   +     +   ME  G  P++  YN L++ L     +D AL+
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 580 LFGQLTDRGLEPDIITYNTII 600
           LF  + ++G  PD ITY TII
Sbjct: 418 LFVAMVEKGCVPDTITYGTII 438



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/411 (34%), Positives = 232/411 (56%), Gaps = 12/411 (2%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           + GF PN +T N +L  LC  G++ +A +L++ ++  G  P+VVT++TL++ FCK  +L+
Sbjct: 3   KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELD 62

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A ++++  ++   VPD++ Y+ LI+G  KA +L E   +L   +   L  DVV ++S++
Sbjct: 63  EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLV 122

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV-EACGLFGQVLIRRL 384
           +   G+   GR  +    +++ GF PNVI+YS LI GLC++ R V EA  LFG VL +  
Sbjct: 123 N---GLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
           EP + TY+ LIDG  K  ++ + F L+  ++K GL+PDA+  ++ I+GL     + DAL 
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                     +P++   N +++G C+ KR  +   L   M      P+ I+   LI G  
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN---ISVGLHMFKLMERNGVAP 556
             G    A+  F +MLKRG+ P V+TY+ ++ GL K +    I   + +F  M   G  P
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           D+  Y+ L++ L K   LD A +L G +  +G  P++ TYN++I G C L 
Sbjct: 360 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLE 410



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 219/396 (55%), Gaps = 20/396 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+  + ++G++DE+++IF      G    PD+V    L++    ++ + +  ++ + 
Sbjct: 48  YNTLLHGFCKVGELDEALKIFDGAVKRGFV--PDVVTYNALINGFCKADKLDEAQRILQR 105

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +        Y  L+NGL + G ++ A  +   ++ +GF PN++T + ++  LC   +
Sbjct: 106 MVSENLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELR 162

Query: 229 -IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            +  A  LF  +L  G +P V T++ LI+   KE ++ +AF+L++ +++  L PD I Y+
Sbjct: 163 GVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYT 222

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           + IDGL KAGR+++   +L    ++G   DVV  ++V++       V  A      M   
Sbjct: 223 VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 282

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS---GKL 404
           G  PN IS++ LI G C+ G+  +A   F ++L R ++P+++TY+ L+DG CK+   G++
Sbjct: 283 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 342

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
           ++  +L+D MI++G  PD V  S LI+GL     + DA R          IPN++ +N+L
Sbjct: 343 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 402

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           + G C L++  + ++LF+ M      PD IT+  +I
Sbjct: 403 ISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 208/415 (50%), Gaps = 47/415 (11%)

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN-- 217
           S++   Y ++ +A        Y  L++G  + G ++ A  +    ++RGFVP++VT N  
Sbjct: 27  SDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNAL 86

Query: 218 --------------KILKR-------------------LCINGQIGNASSLFDVLLLVGP 244
                         +IL+R                   LC NG++  A  L   ++  G 
Sbjct: 87  INGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGF 143

Query: 245 KPNVVTFSTLINAFCKEAK-LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            PNV+T+STLI+  C+E + + +A +L+  +++    P++  Y+ILIDGL K  R+ E  
Sbjct: 144 SPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAF 203

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL    +  GL+ D + ++  +D     G V  A+     M   G +P+V+S++ +I GL
Sbjct: 204 ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 263

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++ R+ EA  L   +  +   P+ +++++LI G C++GK +   + +  M+KRG+KP  
Sbjct: 264 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 323

Query: 424 VVCSLLINGL--------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           V  ++L++GL        + +A+  F   +    +P++  ++ L+DG  +  +  D  +L
Sbjct: 324 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 383

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              M      P+V T+  LI G+     +  A+ LF  M+++G  PD ITY  II
Sbjct: 384 LGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 196/409 (47%), Gaps = 31/409 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVI 92
           N +L    K      A++ F         P++     LI+   ++D  D A  +  +MV 
Sbjct: 49  NTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS 108

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +         L  D +      Y+ L+    + G++DE+  +     D G   SP+++  
Sbjct: 109 E--------NLVPDVV-----TYNSLVNGLCKNGRVDEARMLIV---DKG--FSPNVITY 150

Query: 151 QRLMSCLV-DSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVI 205
             L+S L  +   V +  KL  ++  +G+      Y  L++GLL++  +  AF +   ++
Sbjct: 151 STLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV 210

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           + G  P+ +T    +  LC  G++ +A  +   +   G  P+VV+ + +IN  CKE +++
Sbjct: 211 KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVD 270

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A  L + M      P+ I ++ LI G  +AG+ K+        L RG+K  VV ++ ++
Sbjct: 271 EAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILV 330

Query: 326 DAYVGIGDVGR---AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           D        GR   A+  +D M+  G +P+V++YS LI GL + G+L +A  L G +  +
Sbjct: 331 DGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 390

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
              P++ TY+SLI G C   K+ +   L+  M+++G  PD +    +I+
Sbjct: 391 GCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 71/126 (56%)

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M  +   P+ IT+  L+ G+ + G +S A  L+ +M+K G +PDV+TY+ ++HG  K   
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   L +F    + G  PD+  YN L+N   K   LD A ++  ++    L PD++TYN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 599 IICGYC 604
           ++ G C
Sbjct: 121 LVNGLC 126



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 11/237 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCL 157
           F  L +  L      Y+  I+   + G++++++ +   M + G    PD+V    +++ L
Sbjct: 206 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV--PDVVSHNAVINGL 263

Query: 158 VDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
                V +   L   M  KG       +  L+ G  R G  + A    +++++RG  P +
Sbjct: 264 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 323

Query: 214 VTCNKILKRLCI---NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           VT N ++  LC     G+I  A +LFD ++  G  P+VVT+S LI+   K  KL+ A +L
Sbjct: 324 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 383

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
              M     +P++  Y+ LI GL    ++ E  EL +  +++G   D + + +++ A
Sbjct: 384 LGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%)

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           M ++G  P+   YN LL+ L     +  A  L+ ++   G  PD++TYNT++ G+C +  
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/583 (27%), Positives = 289/583 (49%), Gaps = 49/583 (8%)

Query: 47  NPTPAIQFFKWTH------------NCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQF 94
           +P  A+ FF+W              NC        L++VL+++               Q+
Sbjct: 105 DPGAALVFFEWAETRDGYQHEIFCCNC--------LLNVLVKAH--------------QY 142

Query: 95  GKTYNFFRLFRDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
            + ++ FR   +  G +G D   YS LI  ++R GKI  + E+F  M+  G+     + +
Sbjct: 143 SQAHDLFRSRIE--GQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHK 200

Query: 152 RLMSCLVD----SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            ++  L D    S++V  + ++ +         Y  ++NGL +   +++A  +  +++  
Sbjct: 201 SILRGLCDAGQCSDAVLHFREMSKTCPPDSV-TYNTMINGLSKSDRLDDAIRLLEEMVDN 259

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           GF PN+ + N +L   C   ++ NA  L + ++  G  P+VV+++T+IN  CK  ++++A
Sbjct: 260 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEA 319

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            ++ + M++    P++I Y  L+DG  + G L    EL+    +RG + + + ++++M  
Sbjct: 320 CRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHV 379

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +    D+ RA Q    M+  G  P+ I+YS +I G C+ G+L EA  L  Q++ R   P 
Sbjct: 380 FCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPD 439

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           +   S+LID  CK+  +     L    I     PD V  S+LI+ L     + +A  +  
Sbjct: 440 VACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLD 499

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             V+    P++  +N+++DG C+ +R  D   LF  M    + PDV+T++++I       
Sbjct: 500 VMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDN 559

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           +L SA  +  +M +    PDV+TYSA+I+GL K   +     +F+ M   G AP++  YN
Sbjct: 560 NLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYN 619

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            L++ L K   ++ A ++   +  +   PD ITY  +I G C+
Sbjct: 620 TLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCN 662



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 262/501 (52%), Gaps = 11/501 (2%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            ++ LI    R G I  + E+   M   G+  +  L   ++  L  +  +    +L + M 
Sbjct: 880  FTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEME 939

Query: 175  GKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G C      Y  +++ L++ G +++A  +   ++ +G  PN+VT + +L  LC  G++
Sbjct: 940  ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKL 999

Query: 230  GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
              A++L   +   G  PN+VT++T+I+  CK  ++++A+ L   M++    P+++ Y++L
Sbjct: 1000 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 1059

Query: 290  IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
            +D   K G+ ++   L+   +++G   ++  ++S++D +    +V RA Q    M+  G 
Sbjct: 1060 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 1119

Query: 350  LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            +PNV+SY+ +I GLC+  ++ E   L  Q+L     P ++T++++ID  CK+ ++   + 
Sbjct: 1120 VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYE 1179

Query: 410  LYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSV--RMTLIPNLFIFNTLMDGC 463
            L++ + + G  P+ V  + L++GL      D   +  + +  +    P++  +NT++DG 
Sbjct: 1180 LFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGL 1239

Query: 464  CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            C+ KR     KLF+ M    + PD +T++++I  +     +  A  +   MLK G  P  
Sbjct: 1240 CKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGA 1299

Query: 524  ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            ITY  +I G  K  N+   L + +L+   G  PD+  +++ ++ L K   L  A +L   
Sbjct: 1300 ITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLET 1359

Query: 584  LTDRGLEPDIITYNTIICGYC 604
            +   GL PD +TYNT++ G+C
Sbjct: 1360 MLRAGLVPDTVTYNTLLKGFC 1380



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 235/490 (47%), Gaps = 34/490 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    +  ++D+++ +   M D G   +      ++     +N V     L   M 
Sbjct: 233 YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 292

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  ++NGL +   ++ A  +  ++IQRG  PN++T   ++   C  G + 
Sbjct: 293 TRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 352

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   +   G +PN +T++ +++ FC+   +E+A Q+  +M++    PD I YS +I
Sbjct: 353 GAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTII 412

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  KAG+L+E ++LL   + RG + DV   S+++DA      +  A +     +     
Sbjct: 413 SGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCA 472

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V++YSILI  LC+  RL EA      ++  R  P ++TY+S++DG CKS ++ D F L
Sbjct: 473 PDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLL 532

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +D M   G+ PD V  S++I+                                C+     
Sbjct: 533 FDRMRAAGVMPDVVTYSIVIHSF------------------------------CKDNNLD 562

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              K+   M      PDV+T++ LI G+   G++  A  +F +ML  G  P+++TY+ +I
Sbjct: 563 SAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLI 622

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL K   +     M ++M +    PD   Y  L+N L     L+ A ++  ++ D+G  
Sbjct: 623 DGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCL 682

Query: 591 PDIITYNTII 600
           PD +TY T++
Sbjct: 683 PDRMTYGTLL 692



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 218/428 (50%), Gaps = 9/428 (2%)

Query: 184  LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
            L+  LLR    ++A  ++R  +     PN+ T   ++  LC  G IG A  L   +   G
Sbjct: 850  LLQALLRLKRPKDALQVYRNKL--CCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHG 907

Query: 244  PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM-DLVPDLIIYSILIDGLFKAGRLKEG 302
               NV+  + +I   C   KL+ A +L+  M E     PD+  YS ++D L K+G++ + 
Sbjct: 908  VPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 967

Query: 303  NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
              L+   + +G   +VV +SS++      G +  A     RM   G  PN+++Y+ +I G
Sbjct: 968  CRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 1027

Query: 363  LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
             C+ GR+ EA  L  +++    +P+++TY+ L+D FCK GK  D   L + M+++G  P+
Sbjct: 1028 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 1087

Query: 423  AVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
                + L++       +  A +     ++   +PN+  +NT++ G C+  +  + V L  
Sbjct: 1088 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 1147

Query: 478  LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
             M   N  PD++T   +I  +     +  A  LF  + + G TP+++TY++++HGL K +
Sbjct: 1148 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 1207

Query: 538  NISVGLHMFKLMER-NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
                  ++ + M R  G +PDI  YN +++ L K   +D A KLF Q+   GL PD +TY
Sbjct: 1208 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 1267

Query: 597  NTIICGYC 604
            + +I   C
Sbjct: 1268 SIVISSLC 1275



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 152/610 (24%), Positives = 286/610 (46%), Gaps = 47/610 (7%)

Query: 36   NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
            + I+ +L+K+     A +  +   +   SPN+   + L+H L ++   D A+ +  +M  
Sbjct: 952  STIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT- 1010

Query: 93   QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
            + G + N               Y+ +I+ + ++G+IDE+  +   M D G    P++V  
Sbjct: 1011 RSGCSPNIVT------------YNTIIDGHCKLGRIDEAYHLLEEMVDGGC--QPNVVTY 1056

Query: 153  --LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQ 206
              L+              L   M  KG+    F  N LL    +K  +E A  +   +IQ
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 1116

Query: 207  RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            +G VPN+V+ N ++  LC   ++     L + +L     P++VTF+T+I+A CK  +++ 
Sbjct: 1117 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 1176

Query: 267  AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR--GLKLDVVVFSSV 324
            A++L+NL+ E    P+L+ Y+ L+ GL K+ R  +  E LL  + R  G   D++ +++V
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA-EYLLREMTRKQGCSPDIITYNTV 1235

Query: 325  MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
            +D       V RA + + +ML+ G  P+ ++YSI+I  LC+   + EA  +   +L    
Sbjct: 1236 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 1295

Query: 385  EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALR 439
            +P  +TY +LIDGFCK+G L     +   ++ +G  PD V  S+ I+     G +  A  
Sbjct: 1296 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 1355

Query: 440  FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                 +R  L+P+   +NTL+ G C      D V LF +M     +PD  T+T L+  + 
Sbjct: 1356 LLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV 1415

Query: 500  SQGSLSSAILLFFQ-MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD- 557
             + S    +    + M+  G   +    S +   +    ++ +G  +  +  + G   D 
Sbjct: 1416 DKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDA 1475

Query: 558  -----------IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII--CGYC 604
                       + +++ +L + +     + A  L+  +   G+EPD +T+ +++  C + 
Sbjct: 1476 RKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHA 1535

Query: 605  SLNSCLIDGY 614
             L    +D +
Sbjct: 1536 GLLDAAVDEF 1545



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 234/480 (48%), Gaps = 12/480 (2%)

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG---KGFCVYEFLMNGLLRKGVIENAFHMH 201
           LSP++V +++  L+D  +   +++      G   + FC    L+N L++      A  + 
Sbjct: 91  LSPEIVGKVLQRLIDPGAALVFFEWAETRDGYQHEIFCC-NCLLNVLVKAHQYSQAHDLF 149

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           R  I+  +  + VT + ++      G+I  A  LFD +   G K +     +++   C  
Sbjct: 150 RSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDA 209

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            +   A  L+   M     PD + Y+ +I+GL K+ RL +   LL   +D G   +V  +
Sbjct: 210 GQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSY 268

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++V+  +     V  A+   ++M+  G  P+V+SY+ +I GLC+  ++ EAC +  +++ 
Sbjct: 269 NTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ 328

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           R  +P+++TY +L+DGFC+ G L     L   M +RG +P+A+  + +++       M  
Sbjct: 329 RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMER 388

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A +     ++    P+   ++T++ G C+  +  +   L   M     +PDV   + LI 
Sbjct: 389 AHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLID 448

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
            +    ++ SA  L    +     PDV+ YS +IH L K K +        +M +N   P
Sbjct: 449 ALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYP 508

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
           D+  YN +++ L K   ++ A  LF ++   G+ PD++TY+ +I  +C  N+  +D  FK
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNN--LDSAFK 566



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 147/576 (25%), Positives = 260/576 (45%), Gaps = 64/576 (11%)

Query: 70   LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
            LIH L ++     A    D MV          R + D +      Y+ +++   +  +I+
Sbjct: 481  LIHALCKAKRLPEAESWLDVMVKN--------RCYPDVV-----TYNSVVDGLCKSRRIN 527

Query: 130  ESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YE 182
            ++  +F  M   G+   PD+V    ++      N++   +K+   M+ +  CV     Y 
Sbjct: 528  DAFLLFDRMRAAGVM--PDVVTYSIVIHSFCKDNNLDSAFKMLERMK-EAKCVPDVVTYS 584

Query: 183  FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
             L+NGL + G ++ AF + ++++  G  PN+VT N ++  LC   ++  A+ + +++   
Sbjct: 585  ALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQ 644

Query: 243  GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
               P+ +T++ LIN  C  ++LE+A+++   M +   +PD + Y  L+  L K   L E 
Sbjct: 645  SCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNL-EL 703

Query: 303  NELLLTALDRGLKLDVVVFSSVMDAYVGIGDV---------------GRAVQTYDRMLNG 347
             E LL  ++   +       + +  +V  GDV                R + + D+   G
Sbjct: 704  VEQLLKEMEATEEGQWNANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQ--QG 761

Query: 348  GFLPNVISYSILIKGLCQQG-------RLVEA--CGLFGQVLIRRLEPSLLTY--SSLID 396
             F P    Y +    +  QG       R++ +     + +  + R    L T     ++ 
Sbjct: 762  QFSPRPHQYRV--TAVATQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQ 819

Query: 397  GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIP 451
            G  ++G    GF  +    + G   D   C+ L+  L+      DAL+ +    ++   P
Sbjct: 820  GV-RNGDAALGFFDWATS-QEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSP 875

Query: 452  NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
            N+F F  L+ G CR        +L   M  + +  +VI H V+I+G+ S   L SA+ LF
Sbjct: 876  NMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELF 935

Query: 512  FQMLKRG-LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
             +M + G   PDV TYS I+  L K   +     + + M   G +P++  Y+ LL+ L K
Sbjct: 936  KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCK 995

Query: 571  ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
               LD A  L  ++T  G  P+I+TYNTII G+C L
Sbjct: 996  AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL 1031



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 159/369 (43%), Gaps = 78/369 (21%)

Query: 312  RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
             G   D    + ++ A + +     A+Q Y   L     PN+ +++ILI GLC+ G +  
Sbjct: 838  EGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCS--PNMFTFTILIHGLCRAGDIGT 895

Query: 372  ACGLFGQV------------------------------LIRRLE------PSLLTYSSLI 395
            A  L  ++                              L + +E      P + TYS+++
Sbjct: 896  AYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIV 955

Query: 396  DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI 450
            D   KSGK+ D   L ++M+ +G  P+ V  S L++GL     + +A     +  R    
Sbjct: 956  DSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 1015

Query: 451  PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI-- 508
            PN+  +NT++DG C+L R  +   L   M     +P+V+T+TVL+      G    AI  
Sbjct: 1016 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 1075

Query: 509  ---------------------------------LLFFQMLKRGLTPDVITYSAIIHGLFK 535
                                              L   M+++G  P+V++Y+ +I GL K
Sbjct: 1076 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 1135

Query: 536  GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
               +  G+ + + M  N   PDI  +N +++ + K   +D A +LF  + + G  P+++T
Sbjct: 1136 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 1195

Query: 596  YNTIICGYC 604
            YN+++ G C
Sbjct: 1196 YNSLVHGLC 1204


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 163/516 (31%), Positives = 265/516 (51%), Gaps = 30/516 (5%)

Query: 113 CD-YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYY 167
           CD YSF  LI+ +    K+  ++  F  ++ +G    PD+V    L+  L   + V +  
Sbjct: 110 CDVYSFNILIKCFCSCSKLPFALSTFGKITKLG--FQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            L   M       +  LMNGL R+G +  A  +  ++++ G  PN +T   I+  +C   
Sbjct: 168 DLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC--- 224

Query: 228 QIGNASSLFDVLLLVGP----KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           +IG+  S  ++L  +      KPNVV +S +I+   K+ +   A  LY  M E  + PDL
Sbjct: 225 KIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDL 284

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
             Y+ +IDG   +GR  E   LL   L+R +  +VV +S++++AYV       A + YD 
Sbjct: 285 FTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDE 344

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           ML  G +PN I+Y+ +I G C+Q RL  A  +F  +  +   P + T+++LIDG+C + +
Sbjct: 345 MLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKR 404

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFNT 458
           + DG  L   M + GL  D    + LI+G  L+GD   AL    Q +   + P++   NT
Sbjct: 405 IDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 464

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYN-----------IKPDVITHTVLIRGIASQGSLSSA 507
           L+DG C   +  D +++F  M               ++PDV T+ +LI G+ ++G    A
Sbjct: 465 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEA 524

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             L+ +M  RG+ P+ ITYS++I+GL K   +     MF  M     +PD+  +N L++ 
Sbjct: 525 EELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSG 584

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             K   +D  L+LF ++  RG+  D ITY T+I G+
Sbjct: 585 YCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGF 620



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 226/454 (49%), Gaps = 56/454 (12%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++ + GF P++VT + +L  LC+  ++  A  LF  +     +PNVVTF+TL+N  C+E 
Sbjct: 137 KITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC----RPNVVTFTTLMNGLCREG 192

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVF 321
           ++ +A  L + M+E  L P+ I Y  ++DG+ K G       LL    +   +K +VV++
Sbjct: 193 RVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIY 252

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           S+++D     G    A   Y  M   G  P++ +Y+ +I G C  GR  EA  L  ++L 
Sbjct: 253 SAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLE 312

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           R++ P+++TYS+LI+ + K  K  +   LYD M+ RG+ P+ +  + +I+G      +  
Sbjct: 313 RKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDA 372

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A   F+        P++F FNTL+DG C  KR  D  +L   M    +  D  T+  LI 
Sbjct: 373 AEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIH 432

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER----- 551
           G    G L++A+ L  QM+  G+ PD++T + ++ GL     +   L MFK M++     
Sbjct: 433 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDL 492

Query: 552 ------NGVAPDIAIYNVLLNMLI-----------------------------------K 570
                 NGV PD+  YN+L++ LI                                   K
Sbjct: 493 DASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCK 552

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  LD A ++F  +  +   PD++T+NT++ GYC
Sbjct: 553 QSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYC 586



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 238/491 (48%), Gaps = 21/491 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L+    R G++ E+V +   M + G+  +      ++  +           L R M 
Sbjct: 181 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKME 240

Query: 175 -----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
                     +Y  +++GL + G   +A +++ ++ ++G  P++ T N ++   C +G+ 
Sbjct: 241 EMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRW 300

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  L   +L     PNVVT+S LINA+ KE K  +A +LY+ M+   ++P+ I Y+ +
Sbjct: 301 SEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSM 360

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDG  K  RL     +      +G   DV  F++++D Y G   +    +    M   G 
Sbjct: 361 IDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGL 420

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           + +  +Y+ LI G C  G L  A  L  Q++   + P ++T ++L+DG C +GKL+D   
Sbjct: 421 VADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 480

Query: 410 LYDNMIK-----------RGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNL 453
           ++  M K            G++PD    ++LI+GL+      +A   + +     ++PN 
Sbjct: 481 MFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNT 540

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             ++++++G C+  R  +  ++F  MG  +  PDV+T   L+ G    G +   + LF +
Sbjct: 541 ITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCE 600

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M +RG+  D ITY  +IHG  K  NI+  L +F+ M  +GV PD      +L +L  +  
Sbjct: 601 MGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEE 660

Query: 574 LDAALKLFGQL 584
           L  A+ +   L
Sbjct: 661 LKRAVAMLEDL 671



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 195/389 (50%), Gaps = 13/389 (3%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  LF  ++   P P+V+ F+ L+    +  + +    LY  M    +  D+  ++ILI
Sbjct: 60  DAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILI 119

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
                  +L             G + DVV FS+++        V  A+  + +M      
Sbjct: 120 KCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR---- 175

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV++++ L+ GLC++GR+VEA  L  +++   L+P+ +TY +++DG CK G      +L
Sbjct: 176 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNL 235

Query: 411 YDNMIKRG-LKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
              M +   +KP+ V+ S +I+GL       DA   + +     + P+LF +N ++DG C
Sbjct: 236 LRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFC 295

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
              R ++  +L   M    I P+V+T++ LI     +     A  L+ +ML RG+ P+ I
Sbjct: 296 SSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTI 355

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+++I G  K   +    HMF +M   G +PD+  +N L++       +D   +L  ++
Sbjct: 356 TYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEM 415

Query: 585 TDRGLEPDIITYNTIICGYC---SLNSCL 610
           T+ GL  D  TYNT+I G+C    LN+ L
Sbjct: 416 TETGLVADTTTYNTLIHGFCLVGDLNAAL 444



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 211/417 (50%), Gaps = 10/417 (2%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +E+A  +   +++   +P+++  NK++  +    +     SL+  +       +V +F+ 
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI  FC  +KL  A   +  + ++   PD++ +S L+ GL    R+ E  +L      + 
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF----HQM 173

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            + +VV F+++M+     G V  AV   DRM+  G  PN I+Y  ++ G+C+ G  V A 
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 374 GLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            L  ++  +  ++P+++ YS++IDG  K G+  D  +LY  M ++G+ PD    + +I+G
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                   +A R   + +   + PN+  ++ L++   + ++  +  +L+  M    I P+
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            IT+  +I G   Q  L +A  +F+ M  +G +PDV T++ +I G    K I  G  +  
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            M   G+  D   YN L++      +L+AAL L  Q+   G+ PDI+T NT++ G C
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 470


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 161/520 (30%), Positives = 274/520 (52%), Gaps = 34/520 (6%)

Query: 113 CD-YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLVD--SNSV 163
           CD YSF  LI+ +    K+  ++  F  ++ +G++  PD+V    L+   C+ D  S ++
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLH--PDVVTFNTLLHGLCVEDRVSEAL 169

Query: 164 GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
             ++++           +  LMNGL R+G I  A  +  ++++ G  P  +T   I+  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 224 CINGQIGNASSLFDVLLLVGPK----PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           C   +IG+  S  D+L  +       PNVV +S +I++ CK+ +   A  L+  M E  +
Sbjct: 230 C---KIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            PDL  Y+ +I G   +GR  +  +LL   L+R +  DVV ++++++A+V  G    A +
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            YD ML  G +PN I+YS +I G C+Q RL  A  +F  +  +   P+L+T+++LIDG+C
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLF 454
            + ++ DG  L   M + GL  D    + LI+G  L+GD   AL    + +   L P++ 
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYN-----------IKPDVITHTVLIRGIASQGS 503
             +TL+DG C   +  D +++F +M               ++PDV T+ +LI G+ ++G 
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A  L+ +M  RG+ PD ITYS++I GL K   +     MF  M     +P++  +  
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           L+N   K   +D  L+LF ++  RG+  + ITY T+ICG+
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 234/473 (49%), Gaps = 52/473 (10%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM  ++R    +    +++++ ++    +I +   ++K  C   ++  A S F  +  +G
Sbjct: 85  LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLG 144

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVTF+TL++  C E ++ +A  L++ M E    P+++ ++ L++GL + GR+ E  
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDV----------------------------- 334
            LL   ++ GL+   + + +++D    IGD                              
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDS 264

Query: 335 ----GR---AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               GR   A   +  M   G  P++ +Y+ +I G C  GR  +A  L  ++L R++ P 
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++TY++LI+ F K GK  +   LYD M+ RG+ P+ +  S +I+G      +  A   F+
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                   PNL  FNTL+DG C  KR  D ++L   M    +  D  T+  LI G    G
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER----------- 551
            L++A+ L  +M+  GL PD++T   ++ GL     +   L MFK+M++           
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           NGV PD+  YN+L++ LI E     A +L+ ++  RG+ PD ITY+++I G C
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 246/507 (48%), Gaps = 23/507 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F ++F  +       ++ L+    R G+I E+V +   M + G+  +      ++  +  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 160 SNSVGQYYKLCRAMRG-----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
                    L R M           +Y  +++ L + G   +A ++  ++ ++G  P++ 
Sbjct: 232 IGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++   C +G+  +A  L   +L     P+VVT++ LINAF KE K  +A +LY+ M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +   ++P+ I YS +IDG  K  RL     +      +G   +++ F++++D Y G   +
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
              ++    M   G + +  +Y+ LI G    G L  A  L  +++   L P ++T  +L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 395 IDGFCKSGKLRDGFSLYDNMIK-----------RGLKPDAVVCSLLINGLMGD-----AL 438
           +DG C +GKL+D   ++  M K            G++PD    ++LI+GL+ +     A 
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 531

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             + +     ++P+   +++++DG C+  R  +  ++F  MG  +  P+V+T T LI G 
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD- 557
              G +   + LF +M +RG+  + ITY  +I G  K  NI+  L +F+ M  +GV PD 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQL 584
           I I N+L  +  KE  L  A+ +  +L
Sbjct: 652 ITIRNMLTGLWSKE-ELKRAVAMLEKL 677



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/570 (24%), Positives = 266/570 (46%), Gaps = 49/570 (8%)

Query: 17  KCYCSESKTHISDLQFNQA------------NAILANLIKTNNPTPAIQFFKWTHNCVSS 64
           KC+CS SK   +   F +             N +L  L   +  + A+  F         
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCR 181

Query: 65  PNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVR 124
           PN+      L+    R+    + + + +         R+  D L      Y  +++   +
Sbjct: 182 PNVVTFT-TLMNGLCRE--GRIVEAVAL-------LDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLCRAMRGKG--- 177
           IG    ++++   M ++  ++ P++V  + S ++DS            L   M+ KG   
Sbjct: 232 IGDTVSALDLLRKMEEIS-HIIPNVV--IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 178 -FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
               Y  ++ G    G   +A  + +++++R   P++VT N ++      G+   A  L+
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           D +L  G  PN +T+S++I+ FCK+ +L+ A  ++ LM      P+LI ++ LIDG   A
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
            R+ +G ELL    + GL  D   +++++  +  +GD+  A+     M++ G  P++++ 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRR-----------LEPSLLTYSSLIDGFCKSGKLR 405
             L+ GLC  G+L +A  +F  +   +           +EP + TY+ LI G    GK  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
           +   LY+ M  RG+ PD +  S +I+GL     + +A + F      +  PN+  F TL+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +G C+  R  D ++LF  MG   I  + IT+  LI G    G+++ A+ +F +M+  G+ 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           PD IT   ++ GL+  + +   + M + ++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 214/427 (50%), Gaps = 6/427 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L +G      +E+A  +   +++   +P++V   K++  +    +     SL+  +    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + ++ +F+ LI  FC  +KL  A   +  + ++ L PD++ ++ L+ GL    R+ E  
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L     +   + +VV F+++M+     G +  AV   DRM+  G  P  I+Y  ++ G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 364 CQQGRLVEACGLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           C+ G  V A  L  ++  I  + P+++ YS++ID  CK G+  D  +L+  M ++G+ PD
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 423 -----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
                +++     +G   DA +   + +   + P++  +N L++   +  +  +  +L+ 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I P+ IT++ +I G   Q  L +A  +F+ M  +G +P++IT++ +I G    K
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I  G+ +   M   G+  D   YN L++      +L+AAL L  ++   GL PDI+T +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 598 TIICGYC 604
           T++ G C
Sbjct: 470 TLLDGLC 476



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 175/355 (49%), Gaps = 31/355 (8%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L + F +   LE A  L++ M+    +P ++ +  L+  + +  R      L      + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++ D+  F+ ++  +     +  A+ T+ ++   G  P+V++++ L+ GLC + R+ EA 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            LF Q+      P+++T+++L++G C+ G++ +  +L D M++ GL+P  +         
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT-------- 221

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG-MYNIKPDVITHT 492
                                 + T++DG C++      + L   M  + +I P+V+ ++
Sbjct: 222 ----------------------YGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYS 259

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            +I  +   G  S A  LF +M ++G+ PD+ TY+++I G       S    + + M   
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            ++PD+  YN L+N  +KE     A +L+ ++  RG+ P+ ITY+++I G+C  N
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 160/517 (30%), Positives = 272/517 (52%), Gaps = 28/517 (5%)

Query: 113 CD-YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLVD--SNSV 163
           CD YSF  LI+ +    K+  ++  F  ++ +G++  PD+V    L+   C+ D  S ++
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLH--PDVVTFNTLLHGLCVEDRVSEAL 169

Query: 164 GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
             ++++           +  LMNGL R+G I  A  +  ++++ G  P  +T   I+  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 224 CINGQIGNASSLFDVLLLVGPK-PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           C  G   +A +L   +  V    PNVV +S +I++ CK+ +   A  L+  M E  + PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           L  Y+ +I G   +GR  +  +LL   L+R +  DVV ++++++A+V  G    A + YD
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            ML  G +PN I+YS +I G C+Q RL  A  +F  +  +   P+L+T+++LIDG+C + 
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFN 457
           ++ DG  L   M + GL  D    + LI+G  L+GD   AL    + +   L P++   +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYN-----------IKPDVITHTVLIRGIASQGSLSS 506
           TL+DG C   +  D +++F +M               ++PDV T+ +LI G+ ++G    
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L+ +M  RG+ PD ITYS++I GL K   +     MF  M     +P++  +  L+N
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              K   +D  L+LF ++  RG+  + ITY T+ICG+
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 235/473 (49%), Gaps = 52/473 (10%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM  ++R    +    +++++ ++    +I +   ++K  C   ++  A S F  L  +G
Sbjct: 85  LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLG 144

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVTF+TL++  C E ++ +A  L++ M E    P+++ ++ L++GL + GR+ E  
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204

Query: 304 ELLLTALDRGLK------------------------------------LDVVVFSSVMDA 327
            LL   ++ GL+                                     +VV++S+++D+
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G    A   +  M   G  P++ +Y+ +I G C  GR  +A  L  ++L R++ P 
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++TY++LI+ F K GK  +   LYD M+ RG+ P+ +  S +I+G      +  A   F+
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                   PNL  FNTL+DG C  KR  D ++L   M    +  D  T+  LI G    G
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER----------- 551
            L++A+ L  +M+  GL PD++T   ++ GL     +   L MFK+M++           
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           NGV PD+  YN+L++ LI E     A +L+ ++  RG+ PD ITY+++I G C
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 246/507 (48%), Gaps = 23/507 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F ++F  +       ++ L+    R G+I E+V +   M + G+  +      ++  +  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 160 SNSVGQYYKLCRAMRG-----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
                    L R M           +Y  +++ L + G   +A ++  ++ ++G  P++ 
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++   C +G+  +A  L   +L     P+VVT++ LINAF KE K  +A +LY+ M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +   ++P+ I YS +IDG  K  RL     +      +G   +++ F++++D Y G   +
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
              ++    M   G + +  +Y+ LI G    G L  A  L  +++   L P ++T  +L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 395 IDGFCKSGKLRDGFSLYDNMIK-----------RGLKPDAVVCSLLINGLMGD-----AL 438
           +DG C +GKL+D   ++  M K            G++PD    ++LI+GL+ +     A 
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 531

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             + +     ++P+   +++++DG C+  R  +  ++F  MG  +  P+V+T T LI G 
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD- 557
              G +   + LF +M +RG+  + ITY  +I G  K  NI+  L +F+ M  +GV PD 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQL 584
           I I N+L  +  KE  L  A+ +  +L
Sbjct: 652 ITIRNMLTGLWSKE-ELKRAVAMLEKL 677



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 222/452 (49%), Gaps = 47/452 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I++  + G+  ++  +F  M + GI+  PDL                         
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIF--PDLF------------------------ 291

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++ G    G   +A  + +++++R   P++VT N ++      G+   A  
Sbjct: 292 -----TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L+D +L  G  PN +T+S++I+ FCK+ +L+ A  ++ LM      P+LI ++ LIDG  
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            A R+ +G ELL    + GL  D   +++++  +  +GD+  A+     M++ G  P+++
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRR-----------LEPSLLTYSSLIDGFCKSGK 403
           +   L+ GLC  G+L +A  +F  +   +           +EP + TY+ LI G    GK
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
             +   LY+ M  RG+ PD +  S +I+GL     + +A + F      +  PN+  F T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L++G C+  R  D ++LF  MG   I  + IT+  LI G    G+++ A+ +F +M+  G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           + PD IT   ++ GL+  + +   + M + ++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 215/427 (50%), Gaps = 6/427 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L +G      +E+A  +   +++   +P++V   K++  +    +     SL+  +    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + ++ +F+ LI  FC  +KL  A   +  + ++ L PD++ ++ L+ GL    R+ E  
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L     +   + +VV F+++M+     G +  AV   DRM+  G  P  I+Y  ++ G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 364 CQQGRLVEACGLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           C++G  V A  L  ++  +  + P+++ YS++ID  CK G+  D  +L+  M ++G+ PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 423 -----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
                +++     +G   DA +   + +   + P++  +N L++   +  +  +  +L+ 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I P+ IT++ +I G   Q  L +A  +F+ M  +G +P++IT++ +I G    K
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I  G+ +   M   G+  D   YN L++      +L+AAL L  ++   GL PDI+T +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 598 TIICGYC 604
           T++ G C
Sbjct: 470 TLLDGLC 476



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 174/355 (49%), Gaps = 31/355 (8%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L + F +   LE A  L++ M+    +P ++ +  L+  + +  R      L      + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++ D+  F+ ++  +     +  A+ T+ ++   G  P+V++++ L+ GLC + R+ EA 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            LF Q+      P+++T+++L++G C+ G++ +  +L D M++ GL+P  +         
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT-------- 221

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG-MYNIKPDVITHT 492
                                 + T++DG C+       + L   M  + +I P+V+ ++
Sbjct: 222 ----------------------YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            +I  +   G  S A  LF +M ++G+ PD+ TY+++I G       S    + + M   
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            ++PD+  YN L+N  +KE     A +L+ ++  RG+ P+ ITY+++I G+C  N
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 151/509 (29%), Positives = 264/509 (51%), Gaps = 16/509 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+  + R G+ID++   F  M    +  +  L   L+  L  +       +  RAM+
Sbjct: 12  YAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQ 71

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G G      +Y  L++GL ++  ++ A  +  ++   G  PN+VT N ++  LC N +  
Sbjct: 72  GSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPD 131

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME-----MD--LVPDL 283
            A  LF+ +  V   P++VT++TL++   +  KLE+A  L+  M++     MD    P++
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNV 191

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           I YS+LIDGL KA R+ +  ELL +   RG   DV+ ++ ++D       V  A +    
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 251

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           ML+ G +PN+++Y+ L+ GLC+  R+ +A  L   +  R   P+++TY +LIDG CK G+
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           ++D  ++  +MI +G  PD ++ ++LINGL     + +++    ++V   + P++  +++
Sbjct: 312 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 371

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G CR  R  +  +L + +      PDVI ++ LI G+   G +  A  L+  M   G
Sbjct: 372 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
              DV+TYS +I GL K   +     +   M R G  P    YN L+  L    +LD A+
Sbjct: 432 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 491

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +L  ++      P  +TYN +I G C + 
Sbjct: 492 ELVEEMERSNCAPSAVTYNILIHGMCRME 520



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 242/493 (49%), Gaps = 30/493 (6%)

Query: 110 DFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNS 162
           D GC+     Y+ LI+   +  + D + E+F +M    +  SP +V    L+  L  +  
Sbjct: 107 DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMK--SVECSPSMVTYNTLLDGLFRTGK 164

Query: 163 VGQYYKLCRAMRGK-----------GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
           + +   L + M  +               Y  L++GL +   +  A  +   +  RG  P
Sbjct: 165 LERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSP 224

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           +++T   ++  LC   ++  A  +   +L  G  PN+VT+++L++  C+  ++  A  L 
Sbjct: 225 DVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM 284

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M      P+++ Y  LIDGL K GR+K+   +L   +D+G   D+++++ +++     
Sbjct: 285 RDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKA 344

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
             V  ++    R ++GG  P+V++YS +I GLC+  RL EAC L   V  R   P ++ Y
Sbjct: 345 DQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILY 404

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
           S+LIDG CK+GK+ + F LY+ M   G   D V  S LI+GL     + +A     + VR
Sbjct: 405 STLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVR 464

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
           M   P+   +N+L+ G C L    + ++L   M   N  P  +T+ +LI G+     + S
Sbjct: 465 MGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDS 524

Query: 507 AILLFFQMLKR-----GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           A++L  Q   R     G   D I YS++I GL K   ++  L  F+ M  NGV PD   Y
Sbjct: 525 AVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITY 584

Query: 562 NVLLNMLIKECNL 574
           ++LL  L K  +L
Sbjct: 585 SILLEGLKKSKDL 597



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 210/406 (51%), Gaps = 12/406 (2%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P++ T   +L+  C  G+I  A   FD +      PNV   S LI+  CK  +   A + 
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           +  M    +V D +IY+ L+ GL+K  RL +   +L    D G + +VV ++S++D    
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR------- 383
             +  RA + ++ M +    P++++Y+ L+ GL + G+L  A  LF ++L RR       
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
             P+++TYS LIDG CK+ ++     L ++M  RG  PD +  ++L++GL     +  A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
               + +    +PNL  +N+L+ G CR +R +D + L   M      P+V+T+  LI G+
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G +  A  +   M+ +G TPD++ Y+ +I+GL K   +   + + +     G+ PD+
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             Y+ ++  L +   LD A +L   +  RG  PD+I Y+T+I G C
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLC 412



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 264/535 (49%), Gaps = 39/535 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKM-V 91
            A+L+ L K      A+       +    PN+     LI  L +++  D A  +F+ M  
Sbjct: 83  TALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKS 142

Query: 92  IQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM-----SDMGIYLS 146
           ++   +                 Y+ L++   R GK++ ++ +F  M      DM    S
Sbjct: 143 VECSPSM--------------VTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCS 188

Query: 147 PDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHM 200
           P+++    L+  L  +N V Q  +L  +M+ +G       Y  L++GL ++  +  A+ +
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
            R+++  G VPN+VT N +L  LC   ++ +A +L   +   G  PNVVT+ TLI+  CK
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
             +++ A  +   M++    PDL+IY++LI+GL KA ++ E   LL  A+  G+K DVV 
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           +SSV+        +  A +    + + G  P+VI YS LI GLC+ G++ EA  L+  + 
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA 428

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
               +  ++TYS+LIDG CK+G++ +   L   M++ G  P  +  + LI GL     + 
Sbjct: 429 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 488

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP-----DVIT 490
           +A+    +  R    P+   +N L+ G CR++R    V L        +       D I 
Sbjct: 489 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIA 548

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           ++ LI G+   G ++ A+  F +M+  G+ PD ITYS ++ GL K K++    H+
Sbjct: 549 YSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHL 603



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 186/363 (51%), Gaps = 23/363 (6%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +P+V T++ L+  FC+  ++++A + ++ M   +LVP++ + SILIDGL KA R  +   
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
                   G+  D V++++++        + +A+     M + G  PNV++Y+ LI GLC
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           +      A  LF  +      PS++TY++L+DG  ++GKL    +L+  M+ R       
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 425 VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
            CS                       PN+  ++ L+DG C+  R +  V+L   M     
Sbjct: 186 RCS-----------------------PNVITYSVLIDGLCKANRVSQAVELLESMKARGC 222

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PDVIT+T+L+ G+  +  +++A  +  +ML  G  P+++TY++++HGL + + +S  L 
Sbjct: 223 SPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALA 282

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + + M   G  P++  Y  L++ L K   +  A  +   + D+G  PD++ YN +I G C
Sbjct: 283 LMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLC 342

Query: 605 SLN 607
             +
Sbjct: 343 KAD 345



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 205/513 (39%), Gaps = 116/513 (22%)

Query: 22  ESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVL------- 74
           E + H  +      N+++  L K N P  A + F+   +   SP++     +L       
Sbjct: 104 EMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTG 163

Query: 75  -------LQSDMRDVASHVFDKMVIQFGKTYNFF--------RLFR-----DSLGDFGCD 114
                  L  +M D  SH  D        TY+          R+ +     +S+   GC 
Sbjct: 164 KLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCS 223

Query: 115 -----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ------------------ 151
                Y+ L++   +  K+  + E+   M D G    P+LV                   
Sbjct: 224 PDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV--PNLVTYNSLLHGLCRARRVSDAL 281

Query: 152 ---RLMSCLVDSNSVGQYYKL----CRAMRGKGFC----------------VYEFLMNGL 188
              R M+C   + +V  Y  L    C+  R K  C                +Y  L+NGL
Sbjct: 282 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 341

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
            +   ++ +  + R+ +  G  P++VT + ++  LC + ++  A  L   +   G  P+V
Sbjct: 342 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 401

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           + +STLI+  CK  K+++AF LY +M       D++ YS LIDGL KAGR+ E + LL  
Sbjct: 402 ILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 461

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM------------------------ 344
            +  G     + ++S++     +  +  A++  + M                        
Sbjct: 462 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 521

Query: 345 ----------------LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
                             GG   + I+YS LI GLC+ GR+ EA   F +++   + P  
Sbjct: 522 VDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDH 581

Query: 389 LTYSSLIDGFCKSGKLRDGFSLY-DNMIKRGLK 420
           +TYS L++G  KS  L +   L  D M++ G +
Sbjct: 582 ITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 614


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 265/503 (52%), Gaps = 13/503 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN------SVGQYY 167
           DY  ++ N +   K+D+++ +F  M       S     +L+S +          S+G+  
Sbjct: 52  DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE-- 109

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           K+ R     G   Y  L+N   R+  I  A  +  ++++ G+ P+IVT + +L   C   
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +I +A +L D ++ +G +P+ +TF+TLI+      K  +A  L + M++    P+L+ Y 
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ++++GL K G       LL       ++ DVV+F++++D+      V  A+  +  M   
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PNV++YS LI  LC  GR  +A  L   ++ +++ P+L+T+++LID F K GK  + 
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             LYD+MIKR + PD    + L+NG      +  A + F   V     P++  +NTL+ G
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+ KR  D  +LF  M    +  D +T+T LI+G+   G   +A  +F QM+  G+ PD
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           ++TYS ++ GL     +   L +F  M+++ +  DI IY  ++  + K   +D    LF 
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
            L+ +G++P+++TYNT+I G CS
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCS 552



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 238/479 (49%), Gaps = 9/479 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + R  +I  ++ +   M  +G   S   +  L++       +     L   M 
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G+      +  L++GL        A  +  +++QRG  PN+VT   ++  LC  G   
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +L + +     + +VV F+T+I++ CK   ++ A  L+  M    + P+++ YS LI
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L   GR  + ++LL   +++ +  ++V F++++DA+V  G    A + YD M+     
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++ +Y+ L+ G C   RL +A  +F  ++ +   P ++TY++LI GFCKS ++ DG  L
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M  RGL  D V  + LI GL  D     A + F Q V   + P++  ++ L+DG C 
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +    +++F  M    IK D+  +T +I G+   G +     LF  +  +G+ P+V+T
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           Y+ +I GL   + +     + K M+ +G  P+   YN L+   +++ +  A+ +L  ++
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 228/464 (49%), Gaps = 13/464 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           S L+  Y    +I ++V +   M +MG    PD +    L+  L   N   +   L   M
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMG--YRPDTITFTTLIHGLFLHNKASEAVALVDRM 216

Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +G       Y  ++NGL ++G  + A ++  ++       ++V  N I+  LC    +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A +LF  +   G +PNVVT+S+LI+  C   +   A QL + M+E  + P+L+ ++ L
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ID   K G+  E  +L    + R +  D+  ++S+++ +     + +A Q ++ M++   
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V++Y+ LIKG C+  R+ +   LF ++  R L    +TY++LI G    G   +   
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           ++  M+  G+ PD +  S+L++GL     +  AL  F    +  +  +++I+ T+++G C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  +  D   LF  + +  +KP+V+T+  +I G+ S+  L  A  L  +M + G  P+  
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           TY+ +I    +  + +    + + M       D +   ++ NML
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 196/401 (48%), Gaps = 5/401 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           R F        +IL+    + ++ +A  LF  ++   P P++V F+ L++A  K  K + 
Sbjct: 44  RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
              L   M  +++V  L  Y+ILI+   +  ++     LL   +  G +  +V  SS+++
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y     +  AV   D+M+  G+ P+ I+++ LI GL    +  EA  L  +++ R  +P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           +L+TY  +++G CK G      +L + M    ++ D V+ + +I+ L     + DAL  F
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +     + PN+  +++L+   C   R +D  +L   M    I P+++T   LI     +
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A  L+  M+KR + PD+ TY+++++G      +     MF+ M      PD+  Y
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           N L+    K   ++   +LF +++ RGL  D +TY T+I G
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 194/427 (45%), Gaps = 34/427 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++    + G  D ++ +   M    I     +   ++  L     V     L + M 
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++ L   G   +A  +   +I++   PN+VT N ++      G+  
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L+D ++     P++ T+++L+N FC   +L+KA Q++  M+  D  PD++ Y+ LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K+ R+++G EL      RGL  D V +++++      GD   A + + +M++ G  
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++++YSIL+ GLC  G+L +A  +F  +    ++  +  Y+++I+G CK+GK+ DG+ L
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +              CSL + G+                 PN+  +NT++ G C  +   
Sbjct: 528 F--------------CSLSLKGVK----------------PNVVTYNTMISGLCSKRLLQ 557

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +   L   M      P+  T+  LIR     G  +++  L  +M       D  T   + 
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 617

Query: 531 HGLFKGK 537
           + L  G+
Sbjct: 618 NMLHDGR 624



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 160/365 (43%), Gaps = 34/365 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQ----SDMRDVASHVFD 88
           N I+ +L K  +   A+  FK        PN+   + LI  L      SD   + S + +
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323

Query: 89  KMV--------------IQFGKTYNFFRLFRD----SLGDFGCDYSFLIENYVRIGKIDE 130
           K +              ++ GK     +L+ D    S+      Y+ L+  +    ++D+
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383

Query: 131 SVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFL 184
           + ++F +M     +  PD+V    L+     S  V    +L R M  +G       Y  L
Sbjct: 384 AKQMFEFMVSKDCF--PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           + GL   G  +NA  + +Q++  G  P+I+T + +L  LC NG++  A  +FD +     
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           K ++  ++T+I   CK  K++  + L+  +    + P+++ Y+ +I GL     L+E   
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           LL    + G   +   +++++ A++  GD   + +    M +  F+ +  +   L+  + 
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANML 620

Query: 365 QQGRL 369
             GRL
Sbjct: 621 HDGRL 625


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 265/503 (52%), Gaps = 13/503 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN------SVGQYY 167
           DY  ++ N +   K+D+++ +F  M       S     +L+S +          S+G+  
Sbjct: 14  DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE-- 71

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           K+ R     G   Y  L+N   R+  I  A  +  ++++ G+ P+IVT + +L   C   
Sbjct: 72  KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 131

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +I +A +L D ++ +G +P+ +TF+TLI+      K  +A  L + M++    P+L+ Y 
Sbjct: 132 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 191

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ++++GL K G       LL       ++ DVV+F++++D+      V  A+  +  M   
Sbjct: 192 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 251

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PNV++YS LI  LC  GR  +A  L   ++ +++ P+L+T+++LID F K GK  + 
Sbjct: 252 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 311

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             LYD+MIKR + PD    + L+NG      +  A + F   V     P++  +NTL+ G
Sbjct: 312 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 371

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+ KR  D  +LF  M    +  D +T+T LI+G+   G   +A  +F QM+  G+ PD
Sbjct: 372 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 431

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           ++TYS ++ GL     +   L +F  M+++ +  DI IY  ++  + K   +D    LF 
Sbjct: 432 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 491

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
            L+ +G++P+++TYNT+I G CS
Sbjct: 492 SLSLKGVKPNVVTYNTMISGLCS 514



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 238/479 (49%), Gaps = 9/479 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + R  +I  ++ +   M  +G   S   +  L++       +     L   M 
Sbjct: 85  YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 144

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G+      +  L++GL        A  +  +++QRG  PN+VT   ++  LC  G   
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 204

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +L + +     + +VV F+T+I++ CK   ++ A  L+  M    + P+++ YS LI
Sbjct: 205 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 264

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L   GR  + ++LL   +++ +  ++V F++++DA+V  G    A + YD M+     
Sbjct: 265 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 324

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++ +Y+ L+ G C   RL +A  +F  ++ +   P ++TY++LI GFCKS ++ DG  L
Sbjct: 325 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 384

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M  RGL  D V  + LI GL  D     A + F Q V   + P++  ++ L+DG C 
Sbjct: 385 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 444

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +    +++F  M    IK D+  +T +I G+   G +     LF  +  +G+ P+V+T
Sbjct: 445 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 504

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           Y+ +I GL   + +     + K M+ +G  P+   YN L+   +++ +  A+ +L  ++
Sbjct: 505 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 228/464 (49%), Gaps = 13/464 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           S L+  Y    +I ++V +   M +MG    PD +    L+  L   N   +   L   M
Sbjct: 121 SSLLNGYCHGKRISDAVALVDQMVEMG--YRPDTITFTTLIHGLFLHNKASEAVALVDRM 178

Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +G       Y  ++NGL ++G  + A ++  ++       ++V  N I+  LC    +
Sbjct: 179 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 238

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A +LF  +   G +PNVVT+S+LI+  C   +   A QL + M+E  + P+L+ ++ L
Sbjct: 239 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 298

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ID   K G+  E  +L    + R +  D+  ++S+++ +     + +A Q ++ M++   
Sbjct: 299 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 358

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V++Y+ LIKG C+  R+ +   LF ++  R L    +TY++LI G    G   +   
Sbjct: 359 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 418

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           ++  M+  G+ PD +  S+L++GL     +  AL  F    +  +  +++I+ T+++G C
Sbjct: 419 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 478

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  +  D   LF  + +  +KP+V+T+  +I G+ S+  L  A  L  +M + G  P+  
Sbjct: 479 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 538

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           TY+ +I    +  + +    + + M       D +   ++ NML
Sbjct: 539 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 582



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 196/401 (48%), Gaps = 5/401 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           R F        +IL+    + ++ +A  LF  ++   P P++V F+ L++A  K  K + 
Sbjct: 6   RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 65

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
              L   M  +++V  L  Y+ILI+   +  ++     LL   +  G +  +V  SS+++
Sbjct: 66  VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 125

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y     +  AV   D+M+  G+ P+ I+++ LI GL    +  EA  L  +++ R  +P
Sbjct: 126 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 185

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           +L+TY  +++G CK G      +L + M    ++ D V+ + +I+ L     + DAL  F
Sbjct: 186 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 245

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +     + PN+  +++L+   C   R +D  +L   M    I P+++T   LI     +
Sbjct: 246 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 305

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A  L+  M+KR + PD+ TY+++++G      +     MF+ M      PD+  Y
Sbjct: 306 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 365

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           N L+    K   ++   +LF +++ RGL  D +TY T+I G
Sbjct: 366 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 406



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 194/427 (45%), Gaps = 34/427 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++    + G  D ++ +   M    I     +   ++  L     V     L + M 
Sbjct: 190 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 249

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++ L   G   +A  +   +I++   PN+VT N ++      G+  
Sbjct: 250 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 309

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L+D ++     P++ T+++L+N FC   +L+KA Q++  M+  D  PD++ Y+ LI
Sbjct: 310 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 369

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K+ R+++G EL      RGL  D V +++++      GD   A + + +M++ G  
Sbjct: 370 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 429

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++++YSIL+ GLC  G+L +A  +F  +    ++  +  Y+++I+G CK+GK+ DG+ L
Sbjct: 430 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 489

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +              CSL + G+                 PN+  +NT++ G C  +   
Sbjct: 490 F--------------CSLSLKGVK----------------PNVVTYNTMISGLCSKRLLQ 519

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +   L   M      P+  T+  LIR     G  +++  L  +M       D  T   + 
Sbjct: 520 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 579

Query: 531 HGLFKGK 537
           + L  G+
Sbjct: 580 NMLHDGR 586



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 160/365 (43%), Gaps = 34/365 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQ----SDMRDVASHVFD 88
           N I+ +L K  +   A+  FK        PN+   + LI  L      SD   + S + +
Sbjct: 226 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 285

Query: 89  KMV--------------IQFGKTYNFFRLFRD----SLGDFGCDYSFLIENYVRIGKIDE 130
           K +              ++ GK     +L+ D    S+      Y+ L+  +    ++D+
Sbjct: 286 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 345

Query: 131 SVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFL 184
           + ++F +M     +  PD+V    L+     S  V    +L R M  +G       Y  L
Sbjct: 346 AKQMFEFMVSKDCF--PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           + GL   G  +NA  + +Q++  G  P+I+T + +L  LC NG++  A  +FD +     
Sbjct: 404 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           K ++  ++T+I   CK  K++  + L+  +    + P+++ Y+ +I GL     L+E   
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 523

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           LL    + G   +   +++++ A++  GD   + +    M +  F+ +  +   L+  + 
Sbjct: 524 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANML 582

Query: 365 QQGRL 369
             GRL
Sbjct: 583 HDGRL 587


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 160/517 (30%), Positives = 272/517 (52%), Gaps = 28/517 (5%)

Query: 113 CD-YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLVD--SNSV 163
           CD YSF  LI+ +    K+  ++  F  ++ +G++  PD+V    L+   C+ D  S ++
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLH--PDVVTFNTLLHGLCVEDRVSEAL 169

Query: 164 GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
             ++++           +  LMNGL R+G I  A  +  ++++ G  P  +T   I+  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 224 CINGQIGNASSLFDVLLLVGPK-PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           C  G   +A +L   +  V    PNVV +S +I++ CK+ +   A  L+  M E  + PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           L  Y+ +I G   +GR  +  +LL   L+R +  DVV ++++++A+V  G    A + YD
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            ML  G +PN I+YS +I G C+Q RL  A  +F  +  +   P+L+T+++LIDG+C + 
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFN 457
           ++ DG  L   M + GL  D    + LI+G  L+GD   AL    + +   L P++   +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYN-----------IKPDVITHTVLIRGIASQGSLSS 506
           TL+DG C   +  D +++F +M               ++PDV T+ +LI G+ ++G    
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L+ +M  RG+ PD ITYS++I GL K   +     MF  M     +P++  +  L+N
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              K   +D  L+LF ++  RG+  + ITY T+ICG+
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 235/473 (49%), Gaps = 52/473 (10%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM  ++R    +    +++++ ++    +I +   ++K  C   ++  A S F  +  +G
Sbjct: 85  LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLG 144

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVTF+TL++  C E ++ +A  L++ M E    P+++ ++ L++GL + GR+ E  
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204

Query: 304 ELLLTALDRGLK------------------------------------LDVVVFSSVMDA 327
            LL   ++ GL+                                     +VV++S+++D+
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G    A   +  M   G  P++ +Y+ +I G C  GR  +A  L  ++L R++ P 
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++TY++LI+ F K GK  +   LYD M+ RG+ P+ +  S +I+G      +  A   F+
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                   PNL  FNTL+DG C  KR  D ++L   M    +  D  T+  LI G    G
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER----------- 551
            L++A+ L  +M+  GL PD++T   ++ GL     +   L MFK+M++           
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           NGV PD+  YN+L++ LI E     A +L+ ++  RG+ PD ITY+++I G C
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 246/507 (48%), Gaps = 23/507 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F ++F  +       ++ L+    R G+I E+V +   M + G+  +      ++  +  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 160 SNSVGQYYKLCRAMRG-----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
                    L R M           +Y  +++ L + G   +A ++  ++ ++G  P++ 
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++   C +G+  +A  L   +L     P+VVT++ LINAF KE K  +A +LY+ M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +   ++P+ I YS +IDG  K  RL     +      +G   +++ F++++D Y G   +
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
              ++    M   G + +  +Y+ LI G    G L  A  L  +++   L P ++T  +L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 395 IDGFCKSGKLRDGFSLYDNMIK-----------RGLKPDAVVCSLLINGLMGD-----AL 438
           +DG C +GKL+D   ++  M K            G++PD    ++LI+GL+ +     A 
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 531

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             + +     ++P+   +++++DG C+  R  +  ++F  MG  +  P+V+T T LI G 
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD- 557
              G +   + LF +M +RG+  + ITY  +I G  K  NI+  L +F+ M  +GV PD 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQL 584
           I I N+L  +  KE  L  A+ +  +L
Sbjct: 652 ITIRNMLTGLWSKE-ELKRAVAMLEKL 677



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 222/452 (49%), Gaps = 47/452 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I++  + G+  ++  +F  M + GI+  PDL                         
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIF--PDLF------------------------ 291

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++ G    G   +A  + +++++R   P++VT N ++      G+   A  
Sbjct: 292 -----TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L+D +L  G  PN +T+S++I+ FCK+ +L+ A  ++ LM      P+LI ++ LIDG  
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            A R+ +G ELL    + GL  D   +++++  +  +GD+  A+     M++ G  P+++
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRR-----------LEPSLLTYSSLIDGFCKSGK 403
           +   L+ GLC  G+L +A  +F  +   +           +EP + TY+ LI G    GK
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
             +   LY+ M  RG+ PD +  S +I+GL     + +A + F      +  PN+  F T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L++G C+  R  D ++LF  MG   I  + IT+  LI G    G+++ A+ +F +M+  G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           + PD IT   ++ GL+  + +   + M + ++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 215/427 (50%), Gaps = 6/427 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L +G      +E+A  +   +++   +P++V   K++  +    +     SL+  +    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + ++ +F+ LI  FC  +KL  A   +  + ++ L PD++ ++ L+ GL    R+ E  
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L     +   + +VV F+++M+     G +  AV   DRM+  G  P  I+Y  ++ G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 364 CQQGRLVEACGLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           C++G  V A  L  ++  +  + P+++ YS++ID  CK G+  D  +L+  M ++G+ PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 423 -----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
                +++     +G   DA +   + +   + P++  +N L++   +  +  +  +L+ 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I P+ IT++ +I G   Q  L +A  +F+ M  +G +P++IT++ +I G    K
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I  G+ +   M   G+  D   YN L++      +L+AAL L  ++   GL PDI+T +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 598 TIICGYC 604
           T++ G C
Sbjct: 470 TLLDGLC 476



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 174/355 (49%), Gaps = 31/355 (8%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L + F +   LE A  L++ M+    +P ++ +  L+  + +  R      L      + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++ D+  F+ ++  +     +  A+ T+ ++   G  P+V++++ L+ GLC + R+ EA 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            LF Q+      P+++T+++L++G C+ G++ +  +L D M++ GL+P  +         
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT-------- 221

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG-MYNIKPDVITHT 492
                                 + T++DG C+       + L   M  + +I P+V+ ++
Sbjct: 222 ----------------------YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            +I  +   G  S A  LF +M ++G+ PD+ TY+++I G       S    + + M   
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            ++PD+  YN L+N  +KE     A +L+ ++  RG+ P+ ITY+++I G+C  N
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 160/517 (30%), Positives = 272/517 (52%), Gaps = 28/517 (5%)

Query: 113 CD-YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMS--CLVD--SNSV 163
           CD YSF  LI+ +    K+  ++  F  ++ +G++  PD+V    L+   C+ D  S ++
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLH--PDVVTFTTLLHGLCVEDRVSEAL 169

Query: 164 GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
             ++++           +  LMNGL R+G I  A  +  ++++ G  P  +T   I+  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 224 CINGQIGNASSLFDVLLLVGPK-PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           C  G   +A +L   +  V    PNVV +S +I++ CK+ +   A  L+  M E  + PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           L  Y+ +I G   +GR  +  +LL   L+R +  DVV ++++++A+V  G    A + YD
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            ML  G +PN I+YS +I G C+Q RL  A  +F  +  +   P+L+T+++LIDG+C + 
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFN 457
           ++ DG  L   M + GL  D    + LI+G  L+GD   AL    + +   L P++   +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYN-----------IKPDVITHTVLIRGIASQGSLSS 506
           TL+DG C   +  D +++F +M               ++PDV T+ +LI G+ ++G    
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L+ +M  RG+ PD ITYS++I GL K   +     MF  M     +P++  +  L+N
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              K   +D  L+LF ++  RG+  + ITY T+ICG+
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 236/473 (49%), Gaps = 52/473 (10%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM  ++R    +    +++++ ++    +I + N ++K  C   ++  A S F  +  +G
Sbjct: 85  LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG 144

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVTF+TL++  C E ++ +A  L++ M E    P+++ ++ L++GL + GR+ E  
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204

Query: 304 ELLLTALDRGLK------------------------------------LDVVVFSSVMDA 327
            LL   ++ GL+                                     +VV++S+++D+
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G    A   +  M   G  P++ +Y+ +I G C  GR  +A  L  ++L R++ P 
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++TY++LI+ F K GK  +   LYD M+ RG+ P+ +  S +I+G      +  A   F+
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                   PNL  FNTL+DG C  KR  D ++L   M    +  D  T+  LI G    G
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER----------- 551
            L++A+ L  +M+  GL PD++T   ++ GL     +   L MFK+M++           
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           NGV PD+  YN+L++ LI E     A +L+ ++  RG+ PD ITY+++I G C
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 246/507 (48%), Gaps = 23/507 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F ++F  +       ++ L+    R G+I E+V +   M + G+  +      ++  +  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 160 SNSVGQYYKLCRAMRG-----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
                    L R M           +Y  +++ L + G   +A ++  ++ ++G  P++ 
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++   C +G+  +A  L   +L     P+VVT++ LINAF KE K  +A +LY+ M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +   ++P+ I YS +IDG  K  RL     +      +G   +++ F++++D Y G   +
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
              ++    M   G + +  +Y+ LI G    G L  A  L  +++   L P ++T  +L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 395 IDGFCKSGKLRDGFSLYDNMIK-----------RGLKPDAVVCSLLINGLMGD-----AL 438
           +DG C +GKL+D   ++  M K            G++PD    ++LI+GL+ +     A 
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 531

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             + +     ++P+   +++++DG C+  R  +  ++F  MG  +  P+V+T T LI G 
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD- 557
              G +   + LF +M +RG+  + ITY  +I G  K  NI+  L +F+ M  +GV PD 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQL 584
           I I N+L  +  KE  L  A+ +  +L
Sbjct: 652 ITIRNMLTGLWSKE-ELKRAVAMLEKL 677



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 222/452 (49%), Gaps = 47/452 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I++  + G+  ++  +F  M + GI+  PDL                         
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIF--PDLF------------------------ 291

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++ G    G   +A  + +++++R   P++VT N ++      G+   A  
Sbjct: 292 -----TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L+D +L  G  PN +T+S++I+ FCK+ +L+ A  ++ LM      P+LI ++ LIDG  
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            A R+ +G ELL    + GL  D   +++++  +  +GD+  A+     M++ G  P+++
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRR-----------LEPSLLTYSSLIDGFCKSGK 403
           +   L+ GLC  G+L +A  +F  +   +           +EP + TY+ LI G    GK
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
             +   LY+ M  RG+ PD +  S +I+GL     + +A + F      +  PN+  F T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L++G C+  R  D ++LF  MG   I  + IT+  LI G    G+++ A+ +F +M+  G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           + PD IT   ++ GL+  + +   + M + ++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 215/427 (50%), Gaps = 6/427 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L +G      +E+A  +   +++   +P++V   K++  +    +     SL+  +    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + ++ +F+ LI  FC  +KL  A   +  + ++ L PD++ ++ L+ GL    R+ E  
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L     +   + +VV F+++M+     G +  AV   DRM+  G  P  I+Y  ++ G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 364 CQQGRLVEACGLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           C++G  V A  L  ++  +  + P+++ YS++ID  CK G+  D  +L+  M ++G+ PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 423 -----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
                +++     +G   DA +   + +   + P++  +N L++   +  +  +  +L+ 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I P+ IT++ +I G   Q  L +A  +F+ M  +G +P++IT++ +I G    K
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I  G+ +   M   G+  D   YN L++      +L+AAL L  ++   GL PDI+T +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 598 TIICGYC 604
           T++ G C
Sbjct: 470 TLLDGLC 476



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 6/296 (2%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           VV F  +M   V +      +  Y +M       ++ S++ILIK  C   +L  A   FG
Sbjct: 79  VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFG 138

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
           ++    L P ++T+++L+ G C   ++ +  +L+  M +   +P+ V  + L+NGL    
Sbjct: 139 KITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG-MYNIKPDVITH 491
            + +A+    + +   L P    + T++DG C+       + L   M  + +I P+V+ +
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           + +I  +   G  S A  LF +M ++G+ PD+ TY+++I G       S    + + M  
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             ++PD+  YN L+N  +KE     A +L+ ++  RG+ P+ ITY+++I G+C  N
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 273/525 (52%), Gaps = 15/525 (2%)

Query: 99  NFFRL-----FRDSLGDFGCDYSFLIENYVR-IGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +FF L     +  S      DY  ++ N +  I K+D++V++F  M     + S     +
Sbjct: 29  SFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNK 88

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+S +   N       L   M+  G       Y   +N   R+  +  A  +  ++++ G
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           + P+IVT + +L   C + +I +A +L D ++ +G KP+  TF+TLI+      K  +A 
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            L + M++    PDL+ Y  +++GL K G +     LL       ++ DVV++++++D  
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
                +  A+  +  M N G  P+V +YS LI  LC  GR  +A  L   ++ R++ P++
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +T+S+LID F K GKL +   LYD MIKR + PD    S LING      + +A   F  
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            +     PN+  ++TL+ G C+ KR  + ++LF  M    +  + +T+T LI G      
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
             +A ++F QM+  G+ P+++TY+ ++ GL K   ++  + +F+ ++R+ + PDI  YN+
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           ++  + K   ++   +LF  L+ +G+ P++I YNT+I G+C   S
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 246/492 (50%), Gaps = 13/492 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS  I  + R  ++  ++ + A M  +G    PD+V    L++    S  +     L   
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLG--YEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178

Query: 173 MRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G+    F    L++GL        A  +  Q++QRG  P++VT   ++  LC  G 
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A SL   +     + +VV ++T+I+  CK   ++ A  L+  M    + PD+  YS 
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L   GR  + + LL   ++R +  +VV FS+++DA+V  G +  A + YD M+   
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++ +YS LI G C   RL EA  +F  ++ +   P+++TYS+LI GFCK+ ++ +G 
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M +RGL  + V  + LI+G        +A   F Q V + + PN+  +N L+DG 
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +    + +F  +    ++PD+ T+ ++I G+   G +     LF  +  +G++P+V
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           I Y+ +I G  +  +      + K M+ +G  P+   YN L+   +++ + +A+ +L  +
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598

Query: 584 LTDRGLEPDIIT 595
           +   G   D  T
Sbjct: 599 MRSCGFAGDAST 610



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 207/410 (50%), Gaps = 6/410 (1%)

Query: 206 QRGFVPNIVTCNKILK-RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           +R F        +IL+ RL    ++ +A  LF  ++   P P++V F+ L++A  K  K 
Sbjct: 40  ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E    L   M  + +  DL  YSI I+   +  +L     +L   +  G + D+V  SS+
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           ++ Y     +  AV   D+M+  G+ P+  +++ LI GL    +  EA  L  Q++ R  
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
           +P L+TY ++++G CK G +    SL   M K  ++ D V+ + +I+GL     M DAL 
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F +     + P++F +++L+   C   R +D  +L   M    I P+V+T + LI    
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G L  A  L+ +M+KR + PD+ TYS++I+G      +    HMF+LM      P++ 
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            Y+ L+    K   ++  ++LF +++ RGL  + +TY T+I G+     C
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 196/425 (46%), Gaps = 65/425 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+   +   +D+++ +F  M + GI   PD+     L+SCL               
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGI--RPDVFTYSSLISCL--------------- 303

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
                 C Y          G   +A  +   +I+R   PN+VT + ++      G++  A
Sbjct: 304 ------CNY----------GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             L+D ++     P++ T+S+LIN FC   +L++A  ++ LM+  D  P+++ YS LI G
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
             KA R++EG EL      RGL  + V +++++  +    D   A   + +M++ G  PN
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +++Y+IL+ GLC+ G+L +A  +F  +    +EP + TY+ +I+G CK+GK+ DG+ L+ 
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           N+  +G+                               PN+  +NT++ G CR     + 
Sbjct: 528 NLSLKGVS------------------------------PNVIAYNTMISGFCRKGSKEEA 557

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             L   M      P+  T+  LIR     G   ++  L  +M   G   D  T   + + 
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 617

Query: 533 LFKGK 537
           L  G+
Sbjct: 618 LHDGR 622


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 162/551 (29%), Positives = 272/551 (49%), Gaps = 58/551 (10%)

Query: 107 SLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            +G+ GC      Y+ +I    R   +DE++E+   M D G  L PDL       L++  
Sbjct: 240 EMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKG--LVPDLYT--YDILINGF 295

Query: 162 SVGQYYKLCRAMRGKGFCV--------YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
            + +  +  + M  +   V        Y  L++G +R+G IE AF +  +++  G   N+
Sbjct: 296 CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANL 355

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           +  N +L  +C  G++  A  +   ++  G +P+  T+S LI   C+   + +AF+L + 
Sbjct: 356 IIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDE 415

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M +  L P ++ YS++I+GL + G L+  N +L   +  GLK + VV++++M A+   G 
Sbjct: 416 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 475

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           V  +    +RM   G LP+V  Y+ LI G C+  R+ EA     ++L RRL P+  TY +
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535

Query: 394 LIDGF-----------------------------------CKSGKLRDGFSLYDNMIKRG 418
            IDG+                                   CK G + + FS++  ++ R 
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 595

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           +  D    S+LI+GL     M +A   F +     L+PN F +N+L+ G C+        
Sbjct: 596 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 655

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +L   M +  I PD++T+ +LI G+   G +  A  LF  +  RGLTP+ +TY+A++ G 
Sbjct: 656 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 715

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K KN +    + + M   GV PD  IYNV+LN   KE   + AL LF ++ ++G     
Sbjct: 716 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-AST 774

Query: 594 ITYNTIICGYC 604
           +++NT+I GYC
Sbjct: 775 VSFNTLIEGYC 785



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 229/464 (49%), Gaps = 46/464 (9%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+  LL+   +E  + +   +     +P++ T   ++   C   ++GN      VLL +G
Sbjct: 186 LLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHC---KVGNVKDAKRVLLEMG 242

Query: 244 PK---PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            K   PN+VT++ +I   C+   L++A +L   M++  LVPDL  Y ILI+G     R +
Sbjct: 243 EKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSR 302

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   +LL  +D GLK + + +++++D ++  GD+ +A +  D M+  G   N+I ++ L+
Sbjct: 303 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLL 362

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G+C+ G++ +A  +  +++ + +EP   TYS LI+G C+   +   F L D M KR L 
Sbjct: 363 NGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLA 422

Query: 421 PDAVVCSLLINGL--------------------------------MGDALRFFFQSVRMT 448
           P  +  S++INGL                                   A     +  RM 
Sbjct: 423 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 482

Query: 449 L--------IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           L        +P++F +N+L+ G C+ KR  +     M M    ++P+  T+   I G + 
Sbjct: 483 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 542

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G +  A   F +ML  G+ P+V  Y+A+I G  K  N++    +F+ +    V  D+  
Sbjct: 543 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 602

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           Y+VL++ L +   +  A  +F +L ++GL P+  TYN++I G C
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 646



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 241/500 (48%), Gaps = 12/500 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    R G +  +  I   M   G+  +  +   LM+       V +   +   MR
Sbjct: 428 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 487

Query: 175 GKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            +G     FC Y  L+ G  +   +E A     ++++R   PN  T    +      G++
Sbjct: 488 EQGILPDVFC-YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 546

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A   F+ +L  G  PNV  ++ LI   CKE  + +AF ++  ++   ++ D+  YS+L
Sbjct: 547 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 606

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I GL + G++ E   +     ++GL  +   ++S++      G+V +A Q  + M   G 
Sbjct: 607 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 666

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P++++Y+ILI GLC+ G +  A  LF  +  R L P+ +TY++++DG+CKS      F 
Sbjct: 667 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 726

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRF-----FFQSVRMTLIPNLFIFNTLMDGCC 464
           L + M+ RG+ PDA + ++++N    +  +F      FQ +      +   FNTL++G C
Sbjct: 727 LLEEMLLRGVPPDAFIYNVILNFCCKEE-KFEKALDLFQEMLEKGFASTVSFNTLIEGYC 785

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  +  +   L   M      P+ +T+T LI      G +  A  L+ +M +R + P   
Sbjct: 786 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 845

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY++++HG     N+S    +F+ M   G+ PD   Y V+++   +E N+  A KL  ++
Sbjct: 846 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 905

Query: 585 TDRGLEPDIITYNTIICGYC 604
             +G+   +  Y+ +I   C
Sbjct: 906 LVKGMPMSVAAYDALIQALC 925



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 216/428 (50%), Gaps = 6/428 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y  L+ G  ++G +  AF + R ++ R  + ++ T + ++  L  NG++  A  +F  L
Sbjct: 567 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  PN  T+++LI+  CK+  ++KA QL   M    + PD++ Y+ILIDGL KAG +
Sbjct: 627 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 686

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +    L      RGL  + V +++++D Y    +   A Q  + ML  G  P+   Y+++
Sbjct: 687 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 746

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +   C++ +  +A  LF ++L +    S +++++LI+G+CKSGKL++   L + MI++  
Sbjct: 747 LNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF 805

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ V  + LI+     G+MG+A R + +     ++P    + +L+ G   +   ++   
Sbjct: 806 IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 865

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    I+PD +T+ V+I     +G++  A  L  ++L +G+   V  Y A+I  L 
Sbjct: 866 LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALC 925

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K +     L +   +  +G    +   +V+        N+D A ++   +   G   +  
Sbjct: 926 KKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTT 985

Query: 595 TYNTIICG 602
           +   ++ G
Sbjct: 986 SLGDLVDG 993



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/444 (22%), Positives = 219/444 (49%), Gaps = 10/444 (2%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ LIE + + G + E+  +F ++    +         L+  L  +  + + + +   ++
Sbjct: 568  YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 627

Query: 175  GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             KG       Y  L++G  ++G ++ A  +  ++  +G  P+IVT N ++  LC  G+I 
Sbjct: 628  EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE 687

Query: 231  NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
             A +LFD +   G  PN VT++ +++ +CK      AFQL   M+   + PD  IY++++
Sbjct: 688  RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 747

Query: 291  DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            +   K  + ++  +L    L++G     V F+++++ Y   G +  A    + M+   F+
Sbjct: 748  NFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 806

Query: 351  PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            PN ++Y+ LI   C+ G + EA  L+ ++  R + P+  TY+SL+ G+   G + +  +L
Sbjct: 807  PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 866

Query: 411  YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            ++ M+ +G++PD +   ++I+     G + +A +   + +   +  ++  ++ L+   C+
Sbjct: 867  FEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCK 926

Query: 466  LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +   + +KL   +G    +  + T +V+ RG    G++  A  +   M+K G   +  +
Sbjct: 927  KEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTS 986

Query: 526  YSAIIHGLFKGKNISVGLHMFKLM 549
               ++ G   G N     ++ K M
Sbjct: 987  LGDLVDGNQNGANSEDSDNLLKQM 1010



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 200/473 (42%), Gaps = 53/473 (11%)

Query: 51   AIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGD 110
            A ++F    +C   PN+   I+  L      +  H  +  V +    + F  L R  L D
Sbjct: 549  ADRYFNEMLSCGVLPNVG--IYTAL------IEGHCKEGNVTEAFSVFRFI-LSRRVLQD 599

Query: 111  FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC 170
                YS LI    R GK+ E+  IF+ + + G+  +      L+S      +V +  +L 
Sbjct: 600  VQT-YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLL 658

Query: 171  RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
              M  KG       Y  L++GL + G IE A ++   +  RG  PN VT   ++   C +
Sbjct: 659  EEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 718

Query: 227  GQIGNASSLFDVLLLVGPKPNV----------------------------------VTFS 252
                 A  L + +LL G  P+                                   V+F+
Sbjct: 719  KNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFN 778

Query: 253  TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
            TLI  +CK  KL++A  L   M+E   +P+ + Y+ LID   KAG + E   L L   +R
Sbjct: 779  TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838

Query: 313  GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
             +      ++S++  Y  IG++      ++ M+  G  P+ ++Y ++I   C++G ++EA
Sbjct: 839  NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 898

Query: 373  CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL--- 429
            C L  ++L++ +  S+  Y +LI   CK  +  +   L + + + G +     CS++   
Sbjct: 899  CKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARG 958

Query: 430  --INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
              I G M +A       V+   + N      L+DG      + D+  L   M 
Sbjct: 959  FQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 151/291 (51%), Gaps = 5/291 (1%)

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           V+F  +MD+Y  +G +  AV  +    N  F P+++S + L+  L +  ++     +F  
Sbjct: 146 VIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDG 205

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----- 433
           +   ++ P + TY+++I   CK G ++D   +   M ++G  P+ V  +++I GL     
Sbjct: 206 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARL 265

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + +A+      V   L+P+L+ ++ L++G C  KR+ +   + + M    +KP+ IT+  
Sbjct: 266 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 325

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI G   QG +  A  +  +M+  G+  ++I ++ +++G+ K   +   L + + M   G
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           V PD   Y++L+    +  N+  A +L  ++  R L P ++TY+ II G C
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 8/276 (2%)

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           +G  V+ Y R  NG   PN + + +L+    + G LVEA  +F         PSLL+ +S
Sbjct: 129 LGSIVKCY-RSCNGS--PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNS 185

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMT 448
           L+    K  K+   + ++D M    + PD    + +I+     G + DA R   +     
Sbjct: 186 LLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKG 245

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
             PNL  +N ++ G CR +   + ++L   M    + PD+ T+ +LI G   +     A 
Sbjct: 246 CSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAK 305

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           L+  +M+  GL P+ ITY+A+I G  +  +I     +   M   G+  ++ I+N LLN +
Sbjct: 306 LMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGV 365

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            K   ++ AL++  ++ ++G+EPD  TY+ +I G+C
Sbjct: 366 CKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC 401


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 160/517 (30%), Positives = 272/517 (52%), Gaps = 28/517 (5%)

Query: 113 CD-YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMS--CLVD--SNSV 163
           CD YSF  LI+ +    K+  ++  F  ++ +G++  PD+V    L+   C+ D  S ++
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLH--PDVVTFTTLLHGLCVEDRVSEAL 169

Query: 164 GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
             ++++           +  LMNGL R+G I  A  +  ++++ G  P  +T   I+  +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 224 CINGQIGNASSLFDVLLLVGPK-PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           C  G   +A +L   +  V    PNVV +S +I++ CK+ +   A  L+  M E  + PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           L  Y+ +I G   +GR  +  +LL   L+R +  DVV ++++++A+V  G    A + YD
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            ML  G +PN I+YS +I G C+Q RL  A  +F  +  +   P+L+T+++LIDG+C + 
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFN 457
           ++ DG  L   M + GL  D    + LI+G  L+GD   AL    + +   L P++   +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYN-----------IKPDVITHTVLIRGIASQGSLSS 506
           TL+DG C   +  D +++F +M               ++PDV T+ +LI G+ ++G    
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L+ +M  RG+ PD ITYS++I GL K   +     MF  M     +P++  +  L+N
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              K   +D  L+LF ++  RG+  + ITY T+ICG+
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 235/473 (49%), Gaps = 52/473 (10%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM  ++R    +    +++++ ++    +I + N ++K  C   ++  A S F  +  +G
Sbjct: 85  LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG 144

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVTF+TL++  C E ++ +A   ++ M E    P+++ ++ L++GL + GR+ E  
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204

Query: 304 ELLLTALDRGLK------------------------------------LDVVVFSSVMDA 327
            LL   ++ GL+                                     +VV++S+++D+
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G    A   +  M   G  P++ +Y+ +I G C  GR  +A  L  ++L R++ P 
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++TY++LI+ F K GK  +   LYD M+ RG+ P+ +  S +I+G      +  A   F+
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                   PNL  FNTL+DG C  KR  D ++L   M    +  D  T+  LI G    G
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER----------- 551
            L++A+ L  +M+  GL PD++T   ++ GL     +   L MFK+M++           
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           NGV PD+  YN+L++ LI E     A +L+ ++  RG+ PD ITY+++I G C
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 246/507 (48%), Gaps = 23/507 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F ++F  +       ++ L+    R G+I E+V +   M + G+  +      ++  +  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 160 SNSVGQYYKLCRAMRG-----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
                    L R M           +Y  +++ L + G   +A ++  ++ ++G  P++ 
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++   C +G+  +A  L   +L     P+VVT++ LINAF KE K  +A +LY+ M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +   ++P+ I YS +IDG  K  RL     +      +G   +++ F++++D Y G   +
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
              ++    M   G + +  +Y+ LI G    G L  A  L  +++   L P ++T  +L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 395 IDGFCKSGKLRDGFSLYDNMIK-----------RGLKPDAVVCSLLINGLMGD-----AL 438
           +DG C +GKL+D   ++  M K            G++PD    ++LI+GL+ +     A 
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 531

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             + +     ++P+   +++++DG C+  R  +  ++F  MG  +  P+V+T T LI G 
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD- 557
              G +   + LF +M +RG+  + ITY  +I G  K  NI+  L +F+ M  +GV PD 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQL 584
           I I N+L  +  KE  L  A+ +  +L
Sbjct: 652 ITIRNMLTGLWSKE-ELKRAVAMLEKL 677



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/570 (24%), Positives = 264/570 (46%), Gaps = 49/570 (8%)

Query: 17  KCYCSESKTHISDLQFNQAN------------AILANLIKTNNPTPAIQFFKWTHNCVSS 64
           KC+CS SK   +   F +               +L  L   +  + A+ FF         
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCR 181

Query: 65  PNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVR 124
           PN+      L+    R+    + + + +         R+  D L      Y  +++   +
Sbjct: 182 PNVVTFT-TLMNGLCRE--GRIVEAVAL-------LDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLCRAMRGKG--- 177
            G    ++ +   M ++  ++ P++V  + S ++DS            L   M+ KG   
Sbjct: 232 KGDTVSALNLLRKMEEVS-HIIPNVV--IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 178 -FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
               Y  ++ G    G   +A  + +++++R   P++VT N ++      G+   A  L+
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           D +L  G  PN +T+S++I+ FCK+ +L+ A  ++ LM      P+LI ++ LIDG   A
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
            R+ +G ELL    + GL  D   +++++  +  +GD+  A+     M++ G  P++++ 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRR-----------LEPSLLTYSSLIDGFCKSGKLR 405
             L+ GLC  G+L +A  +F  +   +           +EP + TY+ LI G    GK  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
           +   LY+ M  RG+ PD +  S +I+GL     + +A + F      +  PN+  F TL+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +G C+  R  D ++LF  MG   I  + IT+  LI G    G+++ A+ +F +M+  G+ 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           PD IT   ++ GL+  + +   + M + ++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 215/427 (50%), Gaps = 6/427 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L +G      +E+A  +   +++   +P++V   K++  +    +     SL+  +    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + ++ +F+ LI  FC  +KL  A   +  + ++ L PD++ ++ L+ GL    R+ E  
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +      +   + +VV F+++M+     G +  AV   DRM+  G  P  I+Y  ++ G+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 364 CQQGRLVEACGLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           C++G  V A  L  ++  +  + P+++ YS++ID  CK G+  D  +L+  M ++G+ PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 423 -----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
                +++     +G   DA +   + +   + P++  +N L++   +  +  +  +L+ 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I P+ IT++ +I G   Q  L +A  +F+ M  +G +P++IT++ +I G    K
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I  G+ +   M   G+  D   YN L++      +L+AAL L  ++   GL PDI+T +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 598 TIICGYC 604
           T++ G C
Sbjct: 470 TLLDGLC 476



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 6/296 (2%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           VV F  +M   V +      +  Y +M       ++ S++ILIK  C   +L  A   FG
Sbjct: 79  VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFG 138

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
           ++    L P ++T+++L+ G C   ++ +    +  M +   +P+ V  + L+NGL    
Sbjct: 139 KITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREG 198

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG-MYNIKPDVITH 491
            + +A+    + +   L P    + T++DG C+       + L   M  + +I P+V+ +
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           + +I  +   G  S A  LF +M ++G+ PD+ TY+++I G       S    + + M  
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             ++PD+  YN L+N  +KE     A +L+ ++  RG+ P+ ITY+++I G+C  N
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 271/512 (52%), Gaps = 13/512 (2%)

Query: 104 FRDSLGDFGCDYSFLIENYVR-IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS 162
           +  S      DY  ++ N +  I K+D++V++F  M     + S     +L+S +   N 
Sbjct: 39  WERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNK 98

Query: 163 VGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
                 L   M+  G       Y   +N   R+  +  A  +  ++++ G+ P+IVT + 
Sbjct: 99  FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           +L   C + +I +A +L D ++ +G KP+  TF+TLI+      K  +A  L + M++  
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             PDL+ Y  +++GL K G +     LL       +K +VV+F++++D+      V  AV
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             +  M   G  PNV++Y+ LI  LC  GR  +A  L   +L +++ P+++T+++LID F
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
            K GKL +   L++ MI+R + PD +  +LLING      + +A + F   V    +PN+
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +NTL++G C+ KR  D V+LF  M    +  + +T+T +I+G    G   SA ++F Q
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M+   +  D++TYS ++HGL     +   L +FK ++++ +  +I IYN ++  + K   
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           +  A  LF  L+   ++PD++TYNT+I G CS
Sbjct: 519 VGEAWDLFCSLS---IKPDVVTYNTMISGLCS 547



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 239/500 (47%), Gaps = 51/500 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS  I  + R  ++  ++ + A M  +G    PD+V    L++    S  +     L   
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLG--YEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178

Query: 173 MRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G+    F    L++GL        A  +  Q++QRG  P++VT   ++  LC  G 
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A +L + +     K NVV F+T+I++ CK   +E A  L+  M    + P+++ Y+ 
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+ L   GR  + + LL   L++ +  +VV F++++DA+   G +  A + ++ M+   
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ I+Y++LI G C   RL EA  +F  ++ +   P++ TY++LI+GFCK  ++ DG 
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIP------------- 451
            L+  M +RGL  + V  + +I G       D+ +  F+ +    +P             
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478

Query: 452 -----------------------NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                                  N+FI+NT+++G C+  +  +   LF  +   +IKPDV
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDV 535

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+  +I G+ S+  L  A  LF +M + G  P+  TY+ +I    +  + +    + K 
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595

Query: 549 MERNGVAPDIAIYNVLLNML 568
           M  +G   D +  +++ NML
Sbjct: 596 MRSSGFVGDASTISLVTNML 615



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 201/410 (49%), Gaps = 6/410 (1%)

Query: 206 QRGFVPNIVTCNKILK-RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           +R F        +IL+ RL    ++ +A  LF  ++   P P++V F+ L++A  K  K 
Sbjct: 40  ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E    L   M  + +  DL  YSI I+   +  +L     +L   +  G + D+V  SS+
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           ++ Y     +  AV   D+M+  G+ P+  +++ LI GL    +  EA  L  Q++ R  
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
           +P L+TY ++++G CK G +    +L + M    +K + V+ + +I+ L     +  A+ 
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F +     + PN+  +N+L++  C   R +D  +L   M    I P+V+T   LI    
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G L  A  L  +M++R + PD ITY+ +I+G      +     MFK M      P+I 
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            YN L+N   K   ++  ++LF +++ RGL  + +TY TII G+     C
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 180/363 (49%), Gaps = 8/363 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           ++  +++ L +   +E A  +  ++  +G  PN+VT N ++  LC  G+  +AS L   +
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L     PNVVTF+ LI+AF KE KL +A +L+  M++  + PD I Y++LI+G     RL
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  ++    + +    ++  ++++++ +     V   V+ +  M   G + N ++Y+ +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+G  Q G    A  +F Q++  R+   ++TYS L+ G C  GKL     ++  + K  +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + +  + + +I G+     +G+A   F     +++ P++  +NT++ G C  +   +   
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADD 556

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M      P+  T+  LIR        +++  L  +M   G   D  T S + + L 
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH 616

Query: 535 KGK 537
            G+
Sbjct: 617 DGR 619


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 258/487 (52%), Gaps = 9/487 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
           K+DE+V++F  M     + S     +L+S +               M   G       Y 
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            ++N L R+  +  A  +  ++++ G+ P+IVT N +L   C   +I  A +L D ++ +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G +P+ VTF+TL++   +  K  +A  L   M+     PDL+ Y  +I+GL K G     
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             LL       ++ DVV++S+V+D+      V  A+  +  M N G  P+V +YS LI  
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC  GR  +A  L   +L R++ P+++T++SLID F K GKL +   L+D MI+R + P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + LING      + +A + F   V    +P++  +NTL++G C+ K+  D ++LF 
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    +  + +T+T LI G        +A ++F QM+  G+ P+++TY+ ++ GL K  
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +   + +F+ ++++ + PDI  YN++   + K   ++    LF  L+ +G++PD+I YN
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524

Query: 598 TIICGYC 604
           T+I G+C
Sbjct: 525 TMISGFC 531



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/586 (25%), Positives = 279/586 (47%), Gaps = 35/586 (5%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
           S+  +  L+ ++A  +   ++K+  P P+I  F            ++L+  + +    D+
Sbjct: 37  SRNALLHLKLDEAVDLFGEMVKSR-PFPSIVEF------------SKLLSAIAKMKKFDL 83

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
                +KM I  G ++N +             Y+ +I    R  ++  ++ I   M  +G
Sbjct: 84  VISFGEKMEI-LGVSHNLYT------------YNIMINCLCRRSQLSFALAILGKMMKLG 130

Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAF 198
              S   +  L++     N + +   L   M   G+      +  L++GL +      A 
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
            +  +++ +G  P++VT   ++  LC  G+   A +L + +     + +VV +ST+I++ 
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           CK   ++ A  L+  M    + PD+  YS LI  L   GR  + + LL   L+R +  +V
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           V F+S++DA+   G +  A + +D M+     PN+++Y+ LI G C   RL EA  +F  
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM---- 434
           ++ +   P ++TY++LI+GFCK+ K+ DG  L+ +M +RGL  + V  + LI+G      
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430

Query: 435 -GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             +A   F Q V   + PN+  +NTL+DG C+  +    + +F  +    ++PD+ T+ +
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +  G+   G +     LF  +  +G+ PDVI Y+ +I G  K         +F  M+ +G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
             PD   YN L+   +++ +  A+ +L  ++       D  TY  +
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 203/398 (51%), Gaps = 5/398 (1%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
            K+ +   ++ ++  A  LF  ++   P P++V FS L++A  K  K +        M  
Sbjct: 34  EKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEI 93

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           + +  +L  Y+I+I+ L +  +L     +L   +  G    +V  +S+++ +     +  
Sbjct: 94  LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           AV   D+M+  G+ P+ ++++ L+ GL Q  +  EA  L  +++++  +P L+TY ++I+
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           G CK G+     +L + M K  ++ D V+ S +I+ L     + DAL  F +     + P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           ++F +++L+   C   R +D  +L   M    I P+V+T   LI   A +G L  A  LF
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M++R + P+++TY+++I+G      +     +F LM      PD+  YN L+N   K 
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             +   ++LF  ++ RGL  + +TY T+I G+   + C
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 202/425 (47%), Gaps = 65/425 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS +I++  +   +D+++ +F  M + GI   PD+     L+SCL               
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGI--RPDVFTYSSLISCL--------------- 285

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
                 C Y          G   +A  +   +++R   PN+VT N ++      G++  A
Sbjct: 286 ------CNY----------GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             LFD ++     PN+VT+++LIN FC   +L++A Q++ LM+  D +PD++ Y+ LI+G
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
             KA ++ +G EL      RGL  + V +++++  +    D   A   + +M++ G  PN
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +++Y+ L+ GLC+ G+L +A  +F  +   ++EP + TY+ + +G CK+GK+ DG+ L+ 
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           ++  +G+KPD +                               +NT++ G C+     + 
Sbjct: 510 SLSLKGVKPDVIA------------------------------YNTMISGFCKKGLKEEA 539

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             LF+ M      PD  T+  LIR     G  +++  L  +M       D  TY  +   
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599

Query: 533 LFKGK 537
           L  G+
Sbjct: 600 LHDGR 604


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 256/487 (52%), Gaps = 9/487 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR----GKGFCVYE 182
           K+D++V++F  M       S     +L+S +   N       L   M+          Y 
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            L+N   R+  +  A  +  ++++ G+ P+IVT + +L   C   +I  A +L D + ++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
             +PN VTF+TLI+      K  +A  L + M+     PDL  Y  +++GL K G +   
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             LL       ++ DVV++++++DA     +V  A+  +  M N G  PNV++Y+ LI+ 
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC  GR  +A  L   ++ R++ P+++T+S+LID F K GKL +   LYD MIKR + PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
               S LING      + +A   F   +     PN+  +NTL+ G C+ KR  + ++LF 
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    +  + +T+  LI+G+   G    A  +F +M+  G+ PD+ITYS ++ GL K  
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +   L +F+ ++++ + PDI  YN+++  + K   ++    LF  L+ +G++P++I Y 
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 598 TIICGYC 604
           T+I G+C
Sbjct: 540 TMISGFC 546



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 201/398 (50%), Gaps = 5/398 (1%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
            K+ + + ++ ++ +A  LF  ++   P P++V F+ L++A  K  K +    L   M  
Sbjct: 49  EKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN 108

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           + +  DL  Y+ILI+   +  +L     +L   +  G + D+V  SS+++ Y     +  
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 168

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           AV   D+M    + PN ++++ LI GL    +  EA  L  +++ R  +P L TY ++++
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           G CK G +    SL   M K  ++ D V+ + +I+ L     + DAL  F +     + P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+  +N+L+   C   R +D  +L   M    I P+V+T + LI     +G L  A  L+
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M+KR + PD+ TYS++I+G      +    HMF+LM      P++  YN L+    K 
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             ++  ++LF +++ RGL  + +TYNT+I G      C
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 227/462 (49%), Gaps = 9/462 (1%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S L+  Y    +I E+V +   M  M    +      L+  L   N   +   L   M  
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213

Query: 176 KG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +G       Y  ++NGL ++G I+ A  + +++ +     ++V    I+  LC    + +
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A +LF  +   G +PNVVT+++LI   C   +   A +L + M+E  + P+++ +S LID
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
              K G+L E  +L    + R +  D+  +SS+++ +     +  A   ++ M++    P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV++Y+ LIKG C+  R+ E   LF ++  R L  + +TY++LI G  ++G       ++
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M+  G+ PD +  S+L++GL     +  AL  F    +  + P+++ +N +++G C+ 
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  D   LF  + +  +KP+VI +T +I G   +G    A  LF +M + G  P+  TY
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           + +I    +  + +    + K M   G   D +  ++++NML
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 218/472 (46%), Gaps = 47/472 (9%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LIH L   +    A  + D+MV + G   + F             Y  ++    + G ID
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVAR-GCQPDLFT------------YGTVVNGLCKRGDID 237

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLM 185
            ++ +   M    I     +   ++  L +  +V     L   M  KG       Y  L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
             L   G   +A  +   +I+R   PN+VT + ++      G++  A  L+D ++     
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P++ T+S+LIN FC   +L++A  ++ LM+  D  P+++ Y+ LI G  KA R++EG EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
                 RGL  + V +++++      GD   A + + +M++ G  P++I+YSIL+ GLC+
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G+L +A  +F  +   ++EP + TY+ +I+G CK+GK+ DG+ L+              
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF-------------- 523

Query: 426 CSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           CSL + G+                 PN+ I+ T++ G CR     +   LF  M      
Sbjct: 524 CSLSLKGVK----------------PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
           P+  T+  LIR     G  +++  L  +M   G   D  T S +I+ L  G+
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 125/262 (47%), Gaps = 5/262 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  +    ++DE+  +F  M     + +      L+     +  V +  +L R M 
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L+ GL + G  + A  + ++++  G  P+I+T + +L  LC  G++ 
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F+ L     +P++ T++ +I   CK  K+E  + L+  +    + P++IIY+ +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G  +E + L     + G   +   +++++ A +  GD   + +    M + GF+
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602

Query: 351 PNVISYSILIKGLCQQGRLVEA 372
            +  + S++I  L   GRL ++
Sbjct: 603 GDASTISMVINML-HDGRLEKS 623



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 136/348 (39%), Gaps = 68/348 (19%)

Query: 9   LTVWRSINKCYC-----SESKTHISDLQFNQAN-------AILANLIKTNNPTPAIQFFK 56
           +  + S+ +C C     S++   +SD+   + N       A++   +K      A + + 
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 57  WTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC 113
                   P+I   + LI+     D  D A H+F+ M+             +D   +   
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI------------SKDCFPNV-V 396

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
            Y+ LI+ + +  +++E +E+F  MS  G+  +      L+  L  +       K+ + M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456

Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G       Y  L++GL + G +E A  +   + +    P+I T N +++ +C  G++
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516

Query: 230 GNASSLFDVLLLVGPKPNVV-----------------------------------TFSTL 254
            +   LF  L L G KPNV+                                   T++TL
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           I A  ++     + +L   M     V D    S++I+ +   GRL++ 
Sbjct: 577 IRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 623


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 260/492 (52%), Gaps = 9/492 (1%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----C 179
           R   +D++V  F  M  +       +  +L+  +V          L   ++ KG      
Sbjct: 32  RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+N    +     AF +   +++ G+ PN+VT N I+   CING I  A      L
Sbjct: 92  TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   +  T+ TLIN   K  +++ A  L   M +  + P+L++YS LIDGL K G +
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   L     +RG+ LD V ++S++D    +G      Q   +M+     P+  +++IL
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC++GR++EA G+   +  R  +P ++TY++L++G+C    + +   L++ M+KRGL
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331

Query: 420 KPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD +  ++LI+G     ++ +A+  F +     L+P +  +N+L+DG C   R +   K
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M      PDV+T+ +LI  +  +G +  A+ +   M+K+G+ P+++TY+A++ G  
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
              N++V   +F  M ++G+ PDI  YNVL+N   K   +D A+ LF ++  + L PDI 
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511

Query: 595 TYNTIICGYCSL 606
           +YN++I G C+L
Sbjct: 512 SYNSLIDGLCNL 523



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 252/497 (50%), Gaps = 14/497 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y  LI    + G+I  ++ +   M    +   P+LV    L+  L     V     LC  
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSV--QPNLVMYSALIDGLCKDGFVSDALGLCSQ 220

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  +G       Y  L++G    G  +    +  ++++    P+  T N ++  LC  G+
Sbjct: 221 IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGR 280

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  +  ++   G KP++VT++ L+  +C    + +A +L+N M++  L PD++ Y++
Sbjct: 281 ILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNV 340

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDG  K   + E   L     ++ L   +  ++S++D     G +    +  D M    
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA 400

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V++Y+ILI  LC++GR++EA G+   ++ + ++P+++TY++++DG+C    +    
Sbjct: 401 QPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAK 460

Query: 409 SLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +++ M+K GL+PD +  ++LING     ++ +A+  F +     LIP++  +N+L+DG 
Sbjct: 461 DIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGL 520

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C L R     +L   M      PDVIT+ +L+           AI LF Q+++ G+ PD 
Sbjct: 521 CNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDF 579

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            T  AI+  L KG+ + +     K +  +G +P++  Y +L+N L K+ +   A+ L  +
Sbjct: 580 YTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSK 639

Query: 584 LTDRGLEPDIITYNTII 600
           + D    PD IT+  II
Sbjct: 640 MEDNDRPPDAITFEIII 656



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 199/403 (49%), Gaps = 5/403 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P     +K+L  +   G    A SLF  L   G  P++ TF+ LIN +  ++    AF L
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              +++    P+L+ ++ +I+G    G + +  +     L +G   D   + ++++    
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G +  A+     M      PN++ YS LI GLC+ G + +A GL  Q+  R +    +T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI 450
           Y+SLIDG C  G+ ++   L   M++  + PD    ++LI+ L  +      Q V   + 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 451 -----PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
                P++  +N LM+G C  +   +  +LF  M    ++PDV+ + VLI G      + 
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A++LF ++  + L P + +Y+++I GL     IS    +   M  +   PD+  YN+L+
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           + L KE  +  AL +   +  +G++P+I+TYN ++ GYC  N+
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 9/221 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCL 157
           F R+ +  L     +Y+ LI  Y +   +DE++ +F  M      L PD+     L+  L
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN--LIPDIASYNSLIDGL 520

Query: 158 VDSNSVGQYYKL----CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
            +   +    +L    C + +      Y  L++   +    + A  + RQ+++ G  P+ 
Sbjct: 521 CNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDF 579

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T + I+  LC   ++  A      LL+ G  PNV T++ LINA CK+    +A  L + 
Sbjct: 580 YTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSK 639

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           M + D  PD I + I+I  L +     +  +L    + RGL
Sbjct: 640 MEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 121/276 (43%), Gaps = 42/276 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLVDSNSVGQ--YYK 168
           Y+ LI+   + G+I E++ +   M   G+   P++V    +M   CL ++ +V +  + +
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGV--KPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + ++        Y  L+NG  +  +++ A  + +++  +  +P+I + N ++  LC  G+
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY----------------- 271
           I +   L D +   G  P+V+T++ L++AFCK    +KA  L+                 
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAI 585

Query: 272 --------NLMMEMDLV---------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
                    L M  D +         P++  Y+ILI+ L K G   E   LL    D   
Sbjct: 586 VDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR 645

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             D + F  ++   +   +  +A +  + M+  G +
Sbjct: 646 PPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 256/487 (52%), Gaps = 9/487 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR----GKGFCVYE 182
           K+D++V++F  M       S     +L+S +   N       L   M+          Y 
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            L+N   R+  +  A  +  ++++ G+ P+IVT + +L   C   +I  A +L D + ++
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
             +PN VTF+TLI+      K  +A  L + M+     PDL  Y  +++GL K G +   
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             LL       ++ DVV++++++DA     +V  A+  +  M N G  PNV++Y+ LI+ 
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC  GR  +A  L   ++ R++ P+++T+S+LID F K GKL +   LYD MIKR + PD
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
               S LING      + +A   F   +     PN+  +NTL+ G C+ KR  + ++LF 
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    +  + +T+  LI+G+   G    A  +F +M+  G+ PD+ITYS ++ GL K  
Sbjct: 404 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 463

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +   L +F+ ++++ + PDI  YN+++  + K   ++    LF  L+ +G++P++I Y 
Sbjct: 464 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 523

Query: 598 TIICGYC 604
           T+I G+C
Sbjct: 524 TMISGFC 530



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 201/398 (50%), Gaps = 5/398 (1%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
            K+ + + ++ ++ +A  LF  ++   P P++V F+ L++A  K  K +    L   M  
Sbjct: 33  EKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN 92

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           + +  DL  Y+ILI+   +  +L     +L   +  G + D+V  SS+++ Y     +  
Sbjct: 93  LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 152

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           AV   D+M    + PN ++++ LI GL    +  EA  L  +++ R  +P L TY ++++
Sbjct: 153 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 212

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           G CK G +    SL   M K  ++ D V+ + +I+ L     + DAL  F +     + P
Sbjct: 213 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 272

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+  +N+L+   C   R +D  +L   M    I P+V+T + LI     +G L  A  L+
Sbjct: 273 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 332

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M+KR + PD+ TYS++I+G      +    HMF+LM      P++  YN L+    K 
Sbjct: 333 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 392

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             ++  ++LF +++ RGL  + +TYNT+I G      C
Sbjct: 393 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 430



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 227/462 (49%), Gaps = 9/462 (1%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S L+  Y    +I E+V +   M  M    +      L+  L   N   +   L   M  
Sbjct: 138 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 197

Query: 176 KG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +G       Y  ++NGL ++G I+ A  + +++ +     ++V    I+  LC    + +
Sbjct: 198 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 257

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A +LF  +   G +PNVVT+++LI   C   +   A +L + M+E  + P+++ +S LID
Sbjct: 258 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 317

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
              K G+L E  +L    + R +  D+  +SS+++ +     +  A   ++ M++    P
Sbjct: 318 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 377

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV++Y+ LIKG C+  R+ E   LF ++  R L  + +TY++LI G  ++G       ++
Sbjct: 378 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 437

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M+  G+ PD +  S+L++GL     +  AL  F    +  + P+++ +N +++G C+ 
Sbjct: 438 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 497

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  D   LF  + +  +KP+VI +T +I G   +G    A  LF +M + G  P+  TY
Sbjct: 498 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 557

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           + +I    +  + +    + K M   G   D +  ++++NML
Sbjct: 558 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 599



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 218/472 (46%), Gaps = 47/472 (9%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LIH L   +    A  + D+MV + G   + F             Y  ++    + G ID
Sbjct: 175 LIHGLFLHNKASEAVALIDRMVAR-GCQPDLFT------------YGTVVNGLCKRGDID 221

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLM 185
            ++ +   M    I     +   ++  L +  +V     L   M  KG       Y  L+
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
             L   G   +A  +   +I+R   PN+VT + ++      G++  A  L+D ++     
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 341

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P++ T+S+LIN FC   +L++A  ++ LM+  D  P+++ Y+ LI G  KA R++EG EL
Sbjct: 342 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 401

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
                 RGL  + V +++++      GD   A + + +M++ G  P++I+YSIL+ GLC+
Sbjct: 402 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 461

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G+L +A  +F  +   ++EP + TY+ +I+G CK+GK+ DG+ L+              
Sbjct: 462 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF-------------- 507

Query: 426 CSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           CSL + G+                 PN+ I+ T++ G CR     +   LF  M      
Sbjct: 508 CSLSLKGVK----------------PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 551

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
           P+  T+  LIR     G  +++  L  +M   G   D  T S +I+ L  G+
Sbjct: 552 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 603



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 125/262 (47%), Gaps = 5/262 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  +    ++DE+  +F  M     + +      L+     +  V +  +L R M 
Sbjct: 347 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 406

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L+ GL + G  + A  + ++++  G  P+I+T + +L  LC  G++ 
Sbjct: 407 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 466

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F+ L     +P++ T++ +I   CK  K+E  + L+  +    + P++IIY+ +I
Sbjct: 467 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 526

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G  +E + L     + G   +   +++++ A +  GD   + +    M + GF+
Sbjct: 527 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 586

Query: 351 PNVISYSILIKGLCQQGRLVEA 372
            +  + S++I  L   GRL ++
Sbjct: 587 GDASTISMVINML-HDGRLEKS 607



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 136/348 (39%), Gaps = 68/348 (19%)

Query: 9   LTVWRSINKCYC-----SESKTHISDLQFNQAN-------AILANLIKTNNPTPAIQFFK 56
           +  + S+ +C C     S++   +SD+   + N       A++   +K      A + + 
Sbjct: 274 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 333

Query: 57  WTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC 113
                   P+I   + LI+     D  D A H+F+ M+             +D   +   
Sbjct: 334 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI------------SKDCFPNV-V 380

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
            Y+ LI+ + +  +++E +E+F  MS  G+  +      L+  L  +       K+ + M
Sbjct: 381 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 440

Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G       Y  L++GL + G +E A  +   + +    P+I T N +++ +C  G++
Sbjct: 441 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 500

Query: 230 GNASSLFDVLLLVGPKPNVV-----------------------------------TFSTL 254
            +   LF  L L G KPNV+                                   T++TL
Sbjct: 501 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 560

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           I A  ++     + +L   M     V D    S++I+ +   GRL++ 
Sbjct: 561 IRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 607


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 246/471 (52%), Gaps = 15/471 (3%)

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           RL+  L   N   Q + L   MR  G          L N L     +  A      +++R
Sbjct: 96  RLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRR 155

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G++PN+VT   ++K LC+  +I  A+ LF  +  +G  PN VT+ TLI   C+   +  A
Sbjct: 156 GYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIA 215

Query: 268 FQLYNLMME------MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            +L+  M+       ++  P +I YSI+IDGL K GR  E  EL      +G+  DV+ +
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISY 275

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           S+++  +   G   ++   +D M++ G  P+++++S+LI  LC++G++ EA  L   ++ 
Sbjct: 276 STLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQ 335

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           R + P+L+TY+SLIDGFC  G L     L+ +M  +GL+PD +  + LING      + +
Sbjct: 336 RGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKE 395

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A+  + + +++   PN+  + TL+ G  +  +  D  KLF +M  Y +  +   + + + 
Sbjct: 396 AMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLD 455

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+     L  A+ LF ++       ++  YS +I GL K   +     +F+ + + G+ P
Sbjct: 456 GLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQP 515

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           D+  YN++++   K   +D A  LF ++ + G  PDII YNT++CG+C  N
Sbjct: 516 DVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGN 566



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 255/494 (51%), Gaps = 18/494 (3%)

Query: 125 IGKIDESVEIFAYMSDMGIY-LSPDL--VQRLMSCLVDSNSVGQYYKLCRAMRGKGF--- 178
           + KI+   ++F+  ++M +  LSPDL  +  L +CL + N V +       +  +G+   
Sbjct: 101 LAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPN 160

Query: 179 -CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y  L+ GL  +  I  A  +  ++ + G  PN VT   ++K LC  G +  A  L  
Sbjct: 161 VVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHK 220

Query: 238 VLLL------VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
            +L       V  KP V+T+S +I+  CK  + ++A +L+  M    ++PD+I YS LI 
Sbjct: 221 EMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIH 280

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G   AG+  +   L    +D+G++ D+V FS ++D     G V  A +  + M+  G +P
Sbjct: 281 GFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVP 340

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N+I+Y+ LI G C  G L  A  LF  +  + LEP  ++Y++LI+G+CK+ K+++  +LY
Sbjct: 341 NLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLY 400

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + M++ G  P+      L+ GL     +GDA + F       +  N  I+   +DG C+ 
Sbjct: 401 NEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKN 460

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
               + ++LF  +  YN K ++  ++ LI G+   G L +A  LF ++ + GL PDV+TY
Sbjct: 461 DCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTY 520

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +IHG  K   +     +F+ ME NG  PDI  YN LL    +   L+  +KL  ++  
Sbjct: 521 NIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQ 580

Query: 587 RGLEPDIITYNTII 600
           + + P+  +   ++
Sbjct: 581 KDVSPNAASCTIVV 594



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 227/456 (49%), Gaps = 46/456 (10%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AFH    +++   +P I + N++L  L          SL++ + L G  P++ T S L N
Sbjct: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C   ++ +A      ++    +P+++ Y+ LI GL    R+ E   L L     G   
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL------PNVISYSILIKGLCQQGRLV 370
           + V + +++      G+V  A++ +  MLN          P VI+YSI+I GLC+ GR  
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           EA  LF ++  + + P +++YS+LI GFC +GK      L+D M+ +G++PD V  S+LI
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLI 314

Query: 431 N-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           +     G + +A +     ++  ++PNL  +N+L+DG C +       +LF+ M    ++
Sbjct: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLE 374

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PD I++T LI G      +  A+ L+ +ML+ G +P+V TY  ++ GLF+   +     +
Sbjct: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKL 434

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIK-EC-------------------------------- 572
           F +M+  GV+ +  IY + L+ L K +C                                
Sbjct: 435 FGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCK 494

Query: 573 --NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              L+ A +LF +L+  GL+PD++TYN +I G+C +
Sbjct: 495 AGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKV 530



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 216/438 (49%), Gaps = 15/438 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+      +I E+  +F  M  +G   +      L+  L  + +V    KL + M 
Sbjct: 164 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEML 223

Query: 175 G----------KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                       G   Y  +++GL + G  + A  +  ++  +G +P++++ + ++   C
Sbjct: 224 NDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFC 283

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   +  LFD ++  G +P++VTFS LI+  CKE K+ +A +L  +M++  +VP+LI
Sbjct: 284 CAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLI 343

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ LIDG    G L    EL L+   +GL+ D + ++++++ Y     V  A+  Y+ M
Sbjct: 344 TYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEM 403

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           L  G  PNV +Y  L+KGL Q+G++ +A  LFG +    +  +   Y   +DG CK+  L
Sbjct: 404 LQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCL 463

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
            +   L++ +     K +    S LI+GL     +  A   F +  +  L P++  +N +
Sbjct: 464 FEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIM 523

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           + G C++ +  +   LF  M      PD+I +  L+ G      L   I L  +M+++ +
Sbjct: 524 IHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDV 583

Query: 520 TPDVITYSAIIHGLFKGK 537
           +P+  + + ++  L K +
Sbjct: 584 SPNAASCTIVVDMLCKDE 601



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 171/339 (50%), Gaps = 24/339 (7%)

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +AF  ++LMM    +P +  ++ L+ GL K     +   L       GL  D+   S + 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           +    +  V  A+     +L  G++PNV++Y+ LIKGLC + R+ EA  LF ++      
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
           P+ +TY +LI G C++G +     L+  M                   + DA ++     
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEM-------------------LNDASQY----- 229

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
            +   P +  ++ ++DG C++ R  +  +LF  M    + PDVI+++ LI G    G   
Sbjct: 230 GVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWD 289

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            +  LF +M+ +G+ PD++T+S +I  L K   ++    + ++M + G+ P++  YN L+
Sbjct: 290 QSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLI 349

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +      +L++A +LF  +  +GLEPD I+Y T+I GYC
Sbjct: 350 DGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYC 388



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 170/347 (48%), Gaps = 27/347 (7%)

Query: 68  AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGK 127
           + LIH    +   D + H+FD+MV Q              +      +S LI+   + GK
Sbjct: 276 STLIHGFCCAGKWDQSKHLFDEMVDQ-------------GVQPDMVTFSVLIDTLCKEGK 322

Query: 128 IDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLV-DSNSVGQYYKLCRAMRGKGF---- 178
           + E+ ++   M   GI   P+L+    L+   C+V D NS  + +    +M  KG     
Sbjct: 323 VTEAKKLLEVMIQRGIV--PNLITYNSLIDGFCMVGDLNSARELF---LSMPSKGLEPDE 377

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
             Y  L+NG  +   ++ A +++ +++Q G  PN+ T   +LK L   G++G+A  LF V
Sbjct: 378 ISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGV 437

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G   N   +   ++  CK   L +A +L+N +   +   ++  YS LIDGL KAG+
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L+   EL       GL+ DVV ++ ++  +  +G V  A   +++M   G  P++I+Y+ 
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           L+ G C+  +L E   L  +++ + + P+  + + ++D  CK  K +
Sbjct: 558 LLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYK 604



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 48/289 (16%)

Query: 364 CQQGRL--VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           C+ G +  ++A   F  ++     P + +++ L+ G  K       FSLY+ M   GL P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D    S+L N L     + +AL      +R   IPN+  + TL+ G C   R ++  +LF
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 477 MLM----------------------GMYNI-------------------KPDVITHTVLI 495
           + M                      G  NI                   KP VIT++++I
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G+   G    A  LF +M  +G+ PDVI+YS +IHG           H+F  M   GV 
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           PD+  ++VL++ L KE  +  A KL   +  RG+ P++ITYN++I G+C
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFC 353


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 260/492 (52%), Gaps = 9/492 (1%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----C 179
           R   +D++V  F  M  +       +  +L+  +V          L   ++ KG      
Sbjct: 32  RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+N    +     AF +   +++ G+ PN+VT N I+   CING I  A      L
Sbjct: 92  TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   +  T+ TLIN   K  +++ A  L   M +  + P+L++YS LIDGL K G +
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   L     +RG+ LD V ++S++D    +G      Q   +M+     P+  +++IL
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC++GR++EA G+   +  R  +P ++TY++L++G+C    + +   L++ M+KRGL
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331

Query: 420 KPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD +  ++LI+G     ++ +A+  F +     L+P +  +N+L+DG C   R +   K
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M      PDV+T+ +LI  +  +G +  A+ +   M+K+G+ P+++TY+A++ G  
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
              N++V   +F  M ++G+ PDI  YNVL+N   K   +D A+ LF ++  + L PDI 
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511

Query: 595 TYNTIICGYCSL 606
           +YN++I G C+L
Sbjct: 512 SYNSLIDGLCNL 523



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 252/497 (50%), Gaps = 14/497 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y  LI    + G+I  ++ +   M    +   P+LV    L+  L     V     LC  
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSV--QPNLVMYSALIDGLCKDGFVSDALGLCSQ 220

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  +G       Y  L++G    G  +    +  ++++    P+  T N ++  LC  G+
Sbjct: 221 IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGR 280

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  +  ++   G KP++VT++ L+  +C    + +A +L+N M++  L PD++ Y++
Sbjct: 281 ILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNV 340

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDG  K   + E   L     ++ L   +  ++S++D     G +    +  D M    
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA 400

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V++Y+ILI  LC++GR++EA G+   ++ + ++P+++TY++++DG+C    +    
Sbjct: 401 QPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAK 460

Query: 409 SLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +++ M+K GL+PD +  ++LING     ++ +A+  F +     LIP++  +N+L+DG 
Sbjct: 461 DIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGL 520

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C L R     +L   M      PDVIT+ +L+           AI LF Q+++ G+ PD 
Sbjct: 521 CNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDF 579

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            T  AI+  L KG+ + +     K +  +G +P++  Y +L+N L K+ +   A+ L  +
Sbjct: 580 YTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSK 639

Query: 584 LTDRGLEPDIITYNTII 600
           + D    PD IT+  II
Sbjct: 640 MEDNDRPPDAITFEIII 656



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 199/403 (49%), Gaps = 5/403 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P     +K+L  +   G    A SLF  L   G  P++ TF+ LIN +  ++    AF L
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              +++    P+L+ ++ +I+G    G + +  +     L +G   D   + ++++    
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G +  A+     M      PN++ YS LI GLC+ G + +A GL  Q+  R +    +T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI 450
           Y+SLIDG C  G+ ++   L   M++  + PD    ++LI+ L  +      Q V   + 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 451 -----PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
                P++  +N LM+G C  +   +  +LF  M    ++PDV+ + VLI G      + 
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A++LF ++  + L P + +Y+++I GL     IS    +   M  +   PD+  YN+L+
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           + L KE  +  AL +   +  +G++P+I+TYN ++ GYC  N+
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 9/221 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCL 157
           F R+ +  L     +Y+ LI  Y +   +DE++ +F  M      L PD+     L+  L
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN--LIPDIASYNSLIDGL 520

Query: 158 VDSNSVGQYYKL----CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
            +   +    +L    C + +      Y  L++   +    + A  + RQ+++ G  P+ 
Sbjct: 521 CNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDF 579

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T + I+  LC   ++  A      LL+ G  PNV T++ LINA CK+    +A  L + 
Sbjct: 580 YTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSK 639

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           M + D  PD I + I+I  L +     +  +L    + RGL
Sbjct: 640 MEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 121/276 (43%), Gaps = 42/276 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLVDSNSVGQ--YYK 168
           Y+ LI+   + G+I E++ +   M   G+   P++V    +M   CL ++ +V +  + +
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGV--KPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + ++        Y  L+NG  +  +++ A  + +++  +  +P+I + N ++  LC  G+
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY----------------- 271
           I +   L D +   G  P+V+T++ L++AFCK    +KA  L+                 
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAI 585

Query: 272 --------NLMMEMDLV---------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
                    L M  D +         P++  Y+ILI+ L K G   E   LL    D   
Sbjct: 586 VDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR 645

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             D + F  ++   +   +  +A +  + M+  G +
Sbjct: 646 PPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 264/503 (52%), Gaps = 14/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS +I  + R  K+D + ++F  M + G    P+LV    L+S L  +  + + Y+L   
Sbjct: 80  YSTVIHGFCRQTKVDTAYKLFRQMVENGCM--PNLVTYNTLLSGLCRNGLMDEAYELLDE 137

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR +G       Y+ LM GL + G I+ A  +          P++V  + ++  LC  G+
Sbjct: 138 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGR 197

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  LF+ +     +P+VVTF+ L++  CK  +L++A Q+   M + +  P++I YS 
Sbjct: 198 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDGL K G++++  E+    + RG++ +VV ++S++  +     V  A+   + M   G
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP++I+Y+ LI GLC+ GR  EA  LFG +  +   P ++TYS LI GFCK  ++    
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377

Query: 409 SLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+D+M+K+ + PD V  S L+ G     L+ DA R   + V     P+++ + +L+DG 
Sbjct: 378 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 437

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C++ R  +  ++   M     +P+V+T+T LI      G  + A  L  +M+  G+ P+V
Sbjct: 438 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNV 497

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           ITY ++I G     ++     M + +ER+     D+  Y V+++ L +   + AAL+L  
Sbjct: 498 ITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLE 557

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
            +   G  P    Y  +I G C 
Sbjct: 558 AIKQSGTPPRHDIYVALIRGLCQ 580



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 255/499 (51%), Gaps = 9/499 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I+   +  ++ E+   FA M   G   +      L++     + V + Y L + M+
Sbjct: 10  WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 69

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  +++G  R+  ++ A+ + RQ+++ G +PN+VT N +L  LC NG + 
Sbjct: 70  ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 129

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L D +   G +P+  ++ TL+   CK  K++ A +++      D  PD++ YS LI
Sbjct: 130 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 189

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K GRL E  +L     +   + DVV F+++MD       +  A Q  + M +    
Sbjct: 190 AGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 249

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNVI+YS LI GLC+ G++ +A  +F ++++R +EP+++TY+SLI GFC +  +     L
Sbjct: 250 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 309

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            + M   G  PD +  + LI+GL       +A R F         P++  ++ L+ G C+
Sbjct: 310 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 369

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           L+R      LF  M    + PDV+T + L+ G  + G +  A  L  +M+    +PDV T
Sbjct: 370 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYT 429

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y++++ G  K   +     + K M + G  P++  Y  L++   +      A KL  ++ 
Sbjct: 430 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMV 489

Query: 586 DRGLEPDIITYNTIICGYC 604
             G++P++ITY ++I G+C
Sbjct: 490 GNGVQPNVITYRSLIGGFC 508



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 240/469 (51%), Gaps = 40/469 (8%)

Query: 176 KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           K    +  +++GL +   +  A     ++ ++G VPN  T N ++   C   ++  A  L
Sbjct: 5   KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 64

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
              +   G  PNVVT+ST+I+ FC++ K++ A++L+  M+E   +P+L+ Y+ L+ GL +
Sbjct: 65  LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G + E  ELL    +RGL+ D   + ++M      G +  A++ ++   NG   P+V++
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184

Query: 356 YSILIKGLCQQGRLVEACGLF------------------------------GQVLIRRLE 385
           YS LI GLC+ GRL EAC LF                               Q ++  +E
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244

Query: 386 -----PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
                P+++TYSSLIDG CK+G++RD   ++  MI RG++P+ V  + LI+G      + 
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 304

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
            AL    +      +P++  +NTL+DG C+  RA +  +LF  M      PDVIT++ LI
Sbjct: 305 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 364

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G      +  A  LF  MLK+ + PDV+T+S ++ G      +     + + M  +  +
Sbjct: 365 GGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS 424

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           PD+  Y  L++   K   +  A ++  ++  RG +P+++TY  +I  +C
Sbjct: 425 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFC 473



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 146/502 (29%), Positives = 252/502 (50%), Gaps = 14/502 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  + ++ K+  +  +   M + G  L+P++V    ++        V   YKL R 
Sbjct: 45  YNVLINGFCKVHKVHRAYLLLKEMKESG--LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQ 102

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  L++GL R G+++ A+ +  ++ +RG  P+  + + ++  LC  G+
Sbjct: 103 MVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK 162

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  +F+        P+VV +STLI   CK  +L++A +L+  M E    PD++ ++ 
Sbjct: 163 IDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTA 222

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+DGL K  RL+E  ++L T  DR    +V+ +SS++D     G V  A + + RM+  G
Sbjct: 223 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 282

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV++Y+ LI G C    +  A  L  ++      P ++TY++LIDG CK+G+  +  
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 342

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSV-RMTLIPNLFIFNTLMDGC 463
            L+ +M  +   PD +  S LI G       D  R  F  + +  ++P++  F+TL++G 
Sbjct: 343 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 402

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C      D  +L   M   +  PDV T+T L+ G    G +  A  +  +M KRG  P+V
Sbjct: 403 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 462

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY+A+I    +    +V   + + M  NGV P++  Y  L+       +L+ A K+  +
Sbjct: 463 VTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLER 522

Query: 584 LT-DRGLEPDIITYNTIICGYC 604
           L  D   + D+  Y  ++ G C
Sbjct: 523 LERDENCKADMFAYRVMMDGLC 544



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 226/460 (49%), Gaps = 19/460 (4%)

Query: 93  QFGKTYNFFRLFRD-SLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           + GK     ++F D S GD   D   YS LI    + G++DE+ ++F  M +      PD
Sbjct: 159 KTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSC--EPD 216

Query: 149 LVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHR 202
           +V    LM  L   + + +  ++   M  +        Y  L++GL + G + +A  + +
Sbjct: 217 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 276

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++I RG  PN+VT N ++   C+   + +A  L + +   G  P+++T++TLI+  CK  
Sbjct: 277 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG 336

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +  +A +L+  M      PD+I YS LI G  K  R+     L    L + +  DVV FS
Sbjct: 337 RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFS 396

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           ++++ Y   G V  A +  + M+     P+V +Y+ L+ G C+ GR+VEA  +  ++  R
Sbjct: 397 TLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR 456

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DAL 438
             +P+++TY++LID FC++GK    + L + M+  G++P+ +    LI G  G    +  
Sbjct: 457 GCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 516

Query: 439 RFFFQSVRM--TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           R   + +        ++F +  +MDG CR  R +  ++L   +      P    +  LIR
Sbjct: 517 RKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIR 576

Query: 497 GIASQGSLSSAILLFFQM-LKRGLTPDVITYSAIIHGLFK 535
           G+     L  A+ +  +M L R   P+   Y A+I  L +
Sbjct: 577 GLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAR 616



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 176/334 (52%), Gaps = 5/334 (1%)

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           M+   ++I ++I+IDGL KA RL E          +G   +   ++ +++ +  +  V R
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A      M   G  PNV++YS +I G C+Q ++  A  LF Q++     P+L+TY++L+ 
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIP 451
           G C++G + + + L D M +RGL+PD      L+ GL        AL+ F  +      P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           ++  ++TL+ G C+  R  +  KLF  M   + +PDV+T T L+ G+     L  A  + 
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             M  R  TP+VITYS++I GL K   +     +FK M   G+ P++  YN L++     
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             +D+AL L  ++T  G  PDIITYNT+I G C 
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCK 334



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 40/313 (12%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G+     RLF D    F C+     YS LI  + ++ +ID +  +F  M    +   P
Sbjct: 334 KTGRAPEANRLFGDMKAKF-CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL--P 390

Query: 148 DLV------------------QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
           D+V                  +RL+  +V S+     Y             Y  L++G  
Sbjct: 391 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY------------TYTSLVDGFC 438

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           + G +  A  + +++ +RG  PN+VT   ++   C  G+   A  L + ++  G +PNV+
Sbjct: 439 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVI 498

Query: 250 TFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           T+ +LI  FC    LE+A + L  L  + +   D+  Y +++DGL + GR+    ELL  
Sbjct: 499 TYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA 558

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM-LNGGFLPNVISYSILIKGLCQQG 367
               G      ++ +++       ++G+A++  + M L+    PN  +Y  +I+ L ++G
Sbjct: 559 IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREG 618

Query: 368 RLVEACGLFGQVL 380
           R  EA  L  ++L
Sbjct: 619 RHEEANALADELL 631


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/531 (27%), Positives = 263/531 (49%), Gaps = 41/531 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+ Y R GKID++V +   M  +G+  +  +   L++       + +   +   M 
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L++G  R+G    AF++  +++Q G  P ++T N +LK LC  G   
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  ++ +++  G  P+ V +STL++   K    E A  L+  ++        I ++ +I
Sbjct: 455 DALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 514

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K G++ E  E+     D G   D + + +++D Y    +VG+A +    M      
Sbjct: 515 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXIS 574

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++  Y+ LI GL +  RLVE   L  ++ IR L P+++TY +LIDG+CK G L   FS 
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 634

Query: 411 YDNMIKRGLKPDAVVCSLLINGL----------------------------MGDALRF-- 440
           Y  M + GL  + ++CS +++GL                            +   +R+  
Sbjct: 635 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 441 -------FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
                    +S +  L+PN  ++N  + G C+  +  D  + F ++ +    PD  T+  
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 754

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI G ++ G++  A  L  +ML+RGL P+++TY+A+I+GL K +N+     +F  + + G
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + P++  YN L++   K  N+DAA KL  ++ + G+ P ++TY+ +I G C
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLC 865



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 216/431 (50%), Gaps = 41/431 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ ++   + KG+ +NA ++   + + G +P++ +CN +L  L  NG+   A  ++  +
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           + VG  P+V   S ++NAFCK+ K+++A      M  + + P+++ Y  LI+G       
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING------- 270

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                                       YV +GDV  A      M   G   NV++Y++L
Sbjct: 271 ----------------------------YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 302

Query: 360 IKGLCQQGRLVEACG-LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           IKG C+Q ++ EA   L G      L P    Y  LIDG+C++GK+ D   L D M++ G
Sbjct: 303 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 362

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           LK +  +C+ LING      + +A     + V   L P+ + +NTL+DG CR    ++  
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 422

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M    I+P V+T+  L++G+   G+   A+ ++  M+K G+ PD + YS ++ GL
Sbjct: 423 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGL 482

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           FK +N      ++K +   G       +N +++ L K   +  A ++F ++ D G  PD 
Sbjct: 483 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 542

Query: 594 ITYNTIICGYC 604
           ITY T+I GYC
Sbjct: 543 ITYRTLIDGYC 553



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 248/534 (46%), Gaps = 46/534 (8%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAM 173
           S ++  + + GK+DE+      M ++G+   P++V    L++  V    V     + + M
Sbjct: 230 SIMVNAFCKDGKVDEAAGFVKKMENLGV--EPNIVTYHSLINGYVSLGDVEAAKGVLKFM 287

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRG-FVPNIVTCNKILKRLCINGQ 228
             KG       Y  L+ G  ++  ++ A  + R + +    VP+      ++   C  G+
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +A  L D +L +G K N+   ++LIN +CK  ++ +A  +   M++ +L PD   Y+ 
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+DG  + G   E   L    L  G++  V+ +++++     +G    A+Q +  M+  G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXG 467

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ + YS L+ GL +      A  L+  +L R    S +T++++I G CK GK+ +  
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            ++D M   G  PD +    LI+G      +G A +      R  + P++ ++N+L+ G 
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            + +R  +   L   MG+  + P+++T+  LI G   +G L  A   +F+M + GL+ ++
Sbjct: 588 FKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD----------------IA-------- 559
           I  S ++ GL++   I     + + M  +G  PD                IA        
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 707

Query: 560 --------IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
                   +YN+ +  L K   +D A + F  L+ +G  PD  TY T+I GY +
Sbjct: 708 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 761



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 178/404 (44%), Gaps = 52/404 (12%)

Query: 80  RDVASHVFDKMVIQF----------GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVR 124
           +D+ +  F K  I F          GK      +F D + D GC      Y  LI+ Y +
Sbjct: 496 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIF-DKMKDLGCSPDGITYRTLIDGYCK 554

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----V 180
              + ++ ++   M    I  S ++   L+S L  S  + +   L   M  +G       
Sbjct: 555 ASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVT 614

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++G  ++G+++ AF  + ++ + G   NI+ C+ ++  L   G+I  A+ L   ++
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 241 LVG--PK------------------------------PNVVTFSTLINAFCKEAKLEKAF 268
             G  P                               PN + ++  I   CK  K++ A 
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           + ++++     VPD   Y  LI G   AG + E   L    L RGL  ++V ++++++  
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
               +V RA + + ++   G  PNV++Y+ LI G C+ G +  A  L  +++   + PS+
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
           +TYS+LI+G CK G +     L + MIK G+    +    L+ G
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 148/288 (51%), Gaps = 1/288 (0%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+ + + G +D++   +  M++ G+  +  +   ++S L     + +   L + M 
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 175 GKGFCV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
             GF   +E  +   +R   I+       +  +   +PN +  N  +  LC  G++ +A 
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             F +L L G  P+  T+ TLI+ +     +++AF+L + M+   LVP+++ Y+ LI+GL
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K+  +     L      +GL  +VV +++++D Y  IG++  A +  D+M+  G  P+V
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           ++YS LI GLC+ G +  +  L  Q++   ++  L+ Y +L+ G  K+
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKT 902



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 154/376 (40%), Gaps = 76/376 (20%)

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
           L  + R       VF  ++  YV  G    A+  +D M   G +P++ S + L+  L + 
Sbjct: 145 LVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKN 204

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G    A  ++ Q++   + P +   S +++ FCK GK+ +       M   G++P+ V  
Sbjct: 205 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 264

Query: 427 SLLINGL--MGD------ALRFFFQ---------------------------------SV 445
             LING   +GD       L+F  +                                   
Sbjct: 265 HSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE 324

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLF---MLMGM--------------------- 481
              L+P+   +  L+DG CR  +  D V+L    + +G+                     
Sbjct: 325 EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIH 384

Query: 482 -----------YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
                      +N+KPD  ++  L+ G   +G  S A  L  +ML+ G+ P V+TY+ ++
Sbjct: 385 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 444

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL +       L ++ LM + GVAPD   Y+ LL+ L K  N + A  L+  +  RG  
Sbjct: 445 KGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 504

Query: 591 PDIITYNTIICGYCSL 606
              IT+NT+I G C +
Sbjct: 505 KSRITFNTMISGLCKM 520


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 263/500 (52%), Gaps = 9/500 (1%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           DY  ++ N +   K+D+++ +F  M       S     +L+S +           L   M
Sbjct: 52  DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           +  G       Y  L+N   R+  I  A  +  ++++ G+ P+IVT + +L   C   +I
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A +L D ++ +G +P+ +TF+TLI+      K  +A  L + M++    P+L+ Y ++
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++GL K G +     LL       ++ +VV++S+V+D+         A+  +  M N G 
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            PNVI+YS LI  LC   R  +A  L   ++ R++ P+++T+++LID F K GKL +   
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           LYD MIKR + PD    S LING      + +A   F   +     PN+  +NTL++G C
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           + KR  + V+LF  M    +  + +T+T LI G        +A ++F QM+  G+ P+++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+ ++ GL K   +   + +F+ ++R+ + P I  YN+++  + K   ++    LF  L
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531

Query: 585 TDRGLEPDIITYNTIICGYC 604
           + +G++PD+I YNT+I G+C
Sbjct: 532 SLKGVKPDVIIYNTMISGFC 551



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 204/408 (50%), Gaps = 5/408 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           R F        +IL+    + ++ +A  LF  ++   P P++  F+ L++A  K  K + 
Sbjct: 44  RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
              L   M  + +  +L  Y+ILI+   +  ++     LL   +  G +  +V  SS+++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y     +  AV   D+M+  G+ P+ I+++ LI GL    +  EA  L  +++ R  +P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           +L+TY  +++G CK G +   F+L + M    ++ + V+ S +I+ L       DAL  F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +     + PN+  +++L+   C  +R +D  +L   M    I P+V+T   LI     +
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G L  A  L+ +M+KR + PD+ TYS++I+G      +    HMF+LM      P++  Y
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           N L+N   K   +D  ++LF +++ RGL  + +TY T+I G+     C
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 172/325 (52%), Gaps = 31/325 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I++  +    D+++ +F  M + G+  +      L+SCL                 
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL----------------- 305

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
               C YE             +A  +   +I+R   PN+VT N ++      G++  A  
Sbjct: 306 ----CNYERW----------SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L+D ++     P++ T+S+LIN FC   +L++A  ++ LM+  D  P+++ Y+ LI+G  
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           KA R+ EG EL      RGL  + V +++++  +    D   A   + +M++ G  PN++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ L+ GLC+ G+L +A  +F  +   ++EP++ TY+ +I+G CK+GK+ DG+ L+ ++
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531

Query: 415 IKRGLKPDAVVCSLLINGLMGDALR 439
             +G+KPD ++ + +I+G     L+
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLK 556


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/431 (32%), Positives = 237/431 (54%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+N   R+  I  A  +  ++++ G+ P+IVT + +L   C   +I +A +L D +
Sbjct: 47  TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           + +G +P+ +TF+TLI+      K  +A  L + M++    P+L+ Y ++++GL K G +
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                LL       ++ DVV+F++++D+      V  A+  +  M   G  PNV++YS L
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC  GR  +A  L   ++ +++ P+L+T+++LID F K GK  +   L+D+MIKR +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    + LING      +  A + F   V     P+L  +NTL+ G C+ KR  D  +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    +  D +T+T LI+G+   G   +A  +F QM+  G+ PD++TYS ++ GL 
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +   L +F  M+++ +  DI IY  ++  + K   +D    LF  L+ +G++P+++
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466

Query: 595 TYNTIICGYCS 605
           TYNT+I G CS
Sbjct: 467 TYNTMISGLCS 477



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 238/479 (49%), Gaps = 9/479 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + R  +I  ++ +   M  +G   S   +  L++       +     L   M 
Sbjct: 48  YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 107

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G+      +  L++GL        A  +  +++QRG  PN+VT   ++  LC  G I 
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +L + +     + +VV F+T+I++ CK   ++ A  L+  M    + P+++ YS LI
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L   GR  + ++LL   +++ +  ++V F++++DA+V  G    A + +D M+     
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++ +Y+ LI G C   RL +A  +F  ++ +   P L TY++LI GFCKS ++ DG  L
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M  RGL  D V  + LI GL  D     A + F Q V   + P++  ++ L+DG C 
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +    +++F  M    IK D+  +T +I G+   G +     LF  +  +G+ P+V+T
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           Y+ +I GL   + +     + K M+ +G  PD   YN L+   +++ +  A+ +L  ++
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 229/464 (49%), Gaps = 13/464 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           S L+  Y    +I ++V +   M +MG    PD +    L+  L   N   +   L   M
Sbjct: 84  SSLLNGYCHGKRISDAVALVDQMVEMG--YRPDTITFTTLIHGLFLHNKASEAVALVDRM 141

Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +G       Y  ++NGL ++G I+ AF++  ++       ++V  N I+  LC    +
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A +LF  +   G +PNVVT+S+LI+  C   +   A QL + M+E  + P+L+ ++ L
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ID   K G+  E  +L    + R +  D+  ++S+++ +     + +A Q ++ M++   
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P++ +Y+ LIKG C+  R+ +   LF ++  R L    +TY++LI G    G   +   
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           ++  M+  G+ PD +  S+L++GL     +  AL  F    +  +  +++I+ T+++G C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  +  D   LF  + +  +KP+V+T+  +I G+ S+  L  A  L  +M + G  PD  
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           TY+ +I    +  + +    + + M       D +   ++ NML
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 180/364 (49%), Gaps = 5/364 (1%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P P++  F+ L++A  K  K +    L   M  + +  +L  Y+ILI+   +  ++    
Sbjct: 6   PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            LL   +  G +  +V  SS+++ Y     +  AV   D+M+  G+ P+ I+++ LI GL
Sbjct: 66  ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
               +  EA  L  +++ R  +P+L+TY  +++G CK G +   F+L + M    ++ D 
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V+ + +I+ L     + DAL  F +     + PN+  +++L+   C   R +D  +L   
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    I P+++T   LI     +G    A  L   M+KR + PD+ TY+++I+G      
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     MF+ M      PD+  YN L+    K   ++   +LF +++ RGL  D +TY T
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365

Query: 599 IICG 602
           +I G
Sbjct: 366 LIQG 369



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 192/427 (44%), Gaps = 34/427 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++    + G ID +  +   M    I     +   ++  L     V     L + M 
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++ L   G   +A  +   +I++   PN+VT N ++      G+  
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L D ++     P++ T+++LIN FC   +L+KA Q++  M+  D  PDL  Y+ LI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K+ R+++G EL      RGL  D V +++++      GD   A + + +M++ G  
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++++YSIL+ GLC  G+L +A  +F  +    ++  +  Y+++I+G CK+GK+ DG+ L
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +              CSL + G+                 PN+  +NT++ G C  +   
Sbjct: 453 F--------------CSLSLKGVK----------------PNVVTYNTMISGLCSKRLLQ 482

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +   L   M      PD  T+  LIR     G  +++  L  +M       D  T   + 
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 542

Query: 531 HGLFKGK 537
           + L  G+
Sbjct: 543 NMLHDGR 549



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 80/160 (50%)

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           V+   +P++F FN L+    ++K+    + L   M    I  ++ T+ +LI     +  +
Sbjct: 2   VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           S A+ L  +M+K G  P ++T S++++G   GK IS  + +   M   G  PD   +  L
Sbjct: 62  SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           ++ L        A+ L  ++  RG +P+++TY  ++ G C
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 51/91 (56%)

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M+K    P +  ++ ++  + K K   + + + + M+R G++ ++  YN+L+N   +   
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  AL L G++   G EP I+T ++++ GYC
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYC 91


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/531 (27%), Positives = 263/531 (49%), Gaps = 41/531 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+ Y R GKID++V +   M  +G+  +  +   L++       + +   +   M 
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L++G  R+G    AF++  +++Q G  P ++T N +LK LC  G   
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  ++ +++  G  P+ V +STL++   K    E A  L+  ++        I ++ +I
Sbjct: 455 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 514

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K G++ E  E+     D G   D + + +++D Y    +VG+A +    M      
Sbjct: 515 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPIS 574

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++  Y+ LI GL +  RLVE   L  ++ IR L P+++TY +LIDG+CK G L   FS 
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 634

Query: 411 YDNMIKRGLKPDAVVCSLLINGL----------------------------MGDALRF-- 440
           Y  M + GL  + ++CS +++GL                            +   +R+  
Sbjct: 635 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 441 -------FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
                    +S +  L+PN  ++N  + G C+  +  D  + F ++ +    PD  T+  
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 754

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI G ++ G++  A  L  +ML+RGL P+++TY+A+I+GL K +N+     +F  + + G
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + P++  YN L++   K  N+DAA KL  ++ + G+ P ++TY+ +I G C
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLC 865



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 217/431 (50%), Gaps = 41/431 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ ++   + KG+ +NA ++   + + G +P++ +CN +L  L  NG+   A  ++  +
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           + VG  P+V   S ++NAFCK+ K+++A      M  + + P+++ Y  LI+G       
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING------- 270

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                                       YV +GDV  A      M   G   NV++Y++L
Sbjct: 271 ----------------------------YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 302

Query: 360 IKGLCQQGRLVEACG-LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           IKG C+Q ++ EA   L G      L P    Y  LIDG+C++GK+ D   L D M++ G
Sbjct: 303 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 362

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           LK +  +C+ LING      + +A     + V   L P+ + +NTL+DG CR    ++  
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 422

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M    I+P V+T+  L++G+   G+   A+ ++  M+KRG+ PD + YS ++ GL
Sbjct: 423 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 482

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           FK +N      ++K +   G       +N +++ L K   +  A ++F ++ D G  PD 
Sbjct: 483 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 542

Query: 594 ITYNTIICGYC 604
           ITY T+I GYC
Sbjct: 543 ITYRTLIDGYC 553



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 253/545 (46%), Gaps = 48/545 (8%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAM 173
           S ++  + + GK+DE+      M ++G+   P++V    L++  V    V     + + M
Sbjct: 230 SIMVNAFCKDGKVDEAAGFVKKMENLGV--EPNIVTYHSLINGYVSLGDVEAAKGVLKFM 287

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRG-FVPNIVTCNKILKRLCINGQ 228
             KG       Y  L+ G  ++  ++ A  + R + +    VP+      ++   C  G+
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +A  L D +L +G K N+   ++LIN +CK  ++ +A  +   M++ +L PD   Y+ 
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+DG  + G   E   L    L  G++  V+ +++++     +G    A+Q +  M+  G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 467

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ + YS L+ GL +      A  L+  +L R    S +T++++I G CK GK+ +  
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            ++D M   G  PD +    LI+G      +G A +      R  + P++ ++N+L+ G 
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 587

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            + +R  +   L   MG+  + P+++T+  LI G   +G L  A   +F+M + GL+ ++
Sbjct: 588 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD----------------IA-------- 559
           I  S ++ GL++   I     + + M  +G  PD                IA        
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 707

Query: 560 --------IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLI 611
                   +YN+ +  L K   +D A + F  L+ +G  PD  TY T+I GY +  +  +
Sbjct: 708 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN--V 765

Query: 612 DGYFK 616
           D  F+
Sbjct: 766 DEAFR 770



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 161/311 (51%), Gaps = 1/311 (0%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+ + + G +D++   +  M++ G+  +  +   ++S L     + +   L + M 
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 175 GKGFCV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
             GF   +E  +   +R   I+       +  +   +PN +  N  +  LC  G++ +A 
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             F +L L G  P+  T+ TLI+ +     +++AF+L + M+   LVP+++ Y+ LI+GL
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K+  +     L      +GL  +VV +++++D Y  IG++  A +  D+M+  G  P+V
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++YS LI GLC+ G +  +  L  Q++   ++  L+ Y +L+ G+ +SG+++    LYD 
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDM 914

Query: 414 MIKRGLKPDAV 424
           M  R L   A+
Sbjct: 915 MHIRCLSTTAI 925



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 178/404 (44%), Gaps = 52/404 (12%)

Query: 80  RDVASHVFDKMVIQF----------GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVR 124
           +D+ +  F K  I F          GK      +F D + D GC      Y  LI+ Y +
Sbjct: 496 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIF-DKMKDLGCSPDGITYRTLIDGYCK 554

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----V 180
              + ++ ++   M    I  S ++   L+S L  S  + +   L   M  +G       
Sbjct: 555 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 614

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++G  ++G+++ AF  + ++ + G   NI+ C+ ++  L   G+I  A+ L   ++
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 241 LVG--PK------------------------------PNVVTFSTLINAFCKEAKLEKAF 268
             G  P                               PN + ++  I   CK  K++ A 
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           + ++++     VPD   Y  LI G   AG + E   L    L RGL  ++V ++++++  
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
               +V RA + + ++   G  PNV++Y+ LI G C+ G +  A  L  +++   + PS+
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
           +TYS+LI+G CK G +     L + MIK G+    +    L+ G
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 154/376 (40%), Gaps = 76/376 (20%)

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
           L  + R       VF  ++  YV  G    A+  +D M   G +P++ S + L+  L + 
Sbjct: 145 LVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKN 204

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G    A  ++ Q++   + P +   S +++ FCK GK+ +       M   G++P+ V  
Sbjct: 205 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 264

Query: 427 SLLINGL--MGD------ALRFFFQ---------------------------------SV 445
             LING   +GD       L+F  +                                   
Sbjct: 265 HSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE 324

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLF---MLMGM--------------------- 481
              L+P+   +  L+DG CR  +  D V+L    + +G+                     
Sbjct: 325 EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIH 384

Query: 482 -----------YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
                      +N+KPD  ++  L+ G   +G  S A  L  +ML+ G+ P V+TY+ ++
Sbjct: 385 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 444

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL +       L ++ LM + GVAPD   Y+ LL+ L K  N + A  L+  +  RG  
Sbjct: 445 KGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 504

Query: 591 PDIITYNTIICGYCSL 606
              IT+NT+I G C +
Sbjct: 505 KSRITFNTMISGLCKM 520



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 141/289 (48%), Gaps = 19/289 (6%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIY------LSPDL----VQRLMSCLVDSNSVGQ 165
           S ++    R+G+IDE+  +   M D G +      L  D+    +Q++   L +S     
Sbjct: 651 STMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDES----- 705

Query: 166 YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
               C+        VY   + GL + G +++A      +  +GFVP+  T   ++     
Sbjct: 706 ----CKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 761

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            G +  A  L D +L  G  PN+VT++ LIN  CK   +++A +L++ + +  L P+++ 
Sbjct: 762 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVT 821

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LIDG  K G +    +L    ++ G+   VV +S++++     GD+ R+++  ++M+
Sbjct: 822 YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMI 881

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             G    +I Y  L++G  + G + +   L+  + IR L  + +++  +
Sbjct: 882 KAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQV 930


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 229/437 (52%), Gaps = 3/437 (0%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++GL +    + A  M  +++ RG  P+ VT N I+  LC  G+   A SL  V+
Sbjct: 12  TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 71

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                +P+  T++TLI+  CK+  +++A  L +  +    VPD++ YSIL DGL K GR+
Sbjct: 72  AERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRI 131

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  EL+      G   ++V +++++D         +A +  + +++ GF+P+V++Y+I+
Sbjct: 132 DEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTII 191

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GLC++GRL +A  +   +L R   PS++TY++L++G C++G++ +   ++  M+ +  
Sbjct: 192 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 251

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTL--IPNLFIFNTLMDGCCRLKRATDTVKLFM 477
             DA+    L+NG    +     Q V   +   P + ++N LMDG C+  R  +   +F 
Sbjct: 252 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFE 311

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M      P++ T+ +++ G+   G +  A      M   G  PDV++Y+ II GLFK  
Sbjct: 312 DMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKAS 371

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
                  +   M + G+ PD   YN L+    KE   D A+ +   +   G++PD +TYN
Sbjct: 372 KPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYN 431

Query: 598 TIICGYCSLNSCLIDGY 614
           T+I G    N  L D Y
Sbjct: 432 TLISGLSQTNR-LGDAY 447



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 252/502 (50%), Gaps = 17/502 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+   +  K D++ E+   M D G+  +PD V    +M  L  +    + + L   
Sbjct: 13  YNILIDGLCKASKTDKASEMLHEMVDRGV--TPDTVTFNSIMDGLCKAGKFERAHSLLAV 70

Query: 173 MRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +      C Y  L++GL ++  ++ A  +  + +  GFVP++VT + +   LC  G+
Sbjct: 71  MAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGR 130

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  L   +   G  PN+VT++TLI+  CK +K EKA++L   ++    VPD++ Y+I
Sbjct: 131 IDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTI 190

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++DGL K GRL +  +++   L RG    V+ ++++M+     G V  A   +  M++  
Sbjct: 191 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 250

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              + ++Y  L+ G C+  R  EA  +   +   R  P +  Y++L+DG+CK G+L +  
Sbjct: 251 CTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLDEIP 307

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +++++M  RG  P+    +++++GL     + +A  F         +P++  +N ++DG 
Sbjct: 308 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            +  +  +  ++   M    I PD +T+  L+     +     A+ +   M+K G+ PD 
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDN 427

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNG-VAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           +TY+ +I GL +   +     +   M RNG V      YN +++ L KE  L  AL L  
Sbjct: 428 VTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMD 487

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
            +T  G+E + +TYN  I   C
Sbjct: 488 HMTGHGVEANTVTYNIFIDRLC 509



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 250/506 (49%), Gaps = 21/506 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS L +   + G+IDE+ E+   MS  G   +P+LV    L+  L  ++   + Y+L   
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGC--TPNLVTYNTLIDGLCKASKTEKAYELLET 175

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +   GF      Y  +++GL ++G ++ A  M   +++RG  P+++T   +++ LC  G+
Sbjct: 176 LVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGR 235

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  ++      + + + +L+N +CK ++ ++A ++ + +      P + +Y+ 
Sbjct: 236 VDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNA 292

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+DG  K GRL E   +      RG   ++  ++ VMD     G V  A    + M + G
Sbjct: 293 LMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 352

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            +P+V+SY+I+I GL +  +  EA  +  Q++   + P  +TY++L+  FCK  +  D  
Sbjct: 353 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 412

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM-TLIPNLFIFNTLMDG 462
            +  NMIK G+ PD V  + LI+GL     +GDA     + +R   ++     +NT++D 
Sbjct: 413 GILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDR 472

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+       + L   M  + ++ + +T+ + I  +  +G L  A  L  +M       D
Sbjct: 473 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRD 529

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLM-ERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            ++Y+ +I GL K + +     + + M    G+      +N+L++   K   LD AL L 
Sbjct: 530 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 589

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLN 607
             +  RG  P +ITYN +I   C L+
Sbjct: 590 ELMVQRGCSPSVITYNMVITCLCKLD 615



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 193/396 (48%), Gaps = 37/396 (9%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+V T++ LI+  CK +K +KA ++ + M++  + PD + ++ ++DGL KAG+ +  + L
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L    +R  +     +++++       +V RA    D  ++ GF+P+V++YSIL  GLC+
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +GR+ EA  L  ++      P+L+TY++LIDG CK+ K    + L + ++  G  PD V 
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            +++++GL     +  AL+     ++    P++  +  LM+G CR  R  +   +F  M 
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247

Query: 481 MYNIKPDVITHTVLIR--------------------------------GIASQGSLSSAI 508
             +   D + +  L+                                 G   +G L    
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIP 307

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +F  M  RG  P++ TY+ ++ GL K   +       + M   G  PD+  YN++++ L
Sbjct: 308 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            K      A ++  Q+   G+ PD +TYNT++  +C
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 403



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 145/616 (23%), Positives = 270/616 (43%), Gaps = 59/616 (9%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSD-MRDVASH- 85
           +F +A+++LA + + N       +           N+ +   L+   + S  + DV ++ 
Sbjct: 60  KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYS 119

Query: 86  VFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSD 140
           +    + + G+    F L ++  G+ GC      Y+ LI+   +  K +++ E+   +  
Sbjct: 120 ILADGLCKRGRIDEAFELVKEMSGN-GCTPNLVTYNTLIDGLCKASKTEKAYELLETLVS 178

Query: 141 MGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVI 194
            G    PD+V    ++  L     + +  K+   M  +G       Y  LM GL R G +
Sbjct: 179 SGFV--PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRV 236

Query: 195 ENAFHMHRQVIQR--------------GF------------------VPNIVTCNKILKR 222
           + A H+ ++++ +              G+                   P I   N ++  
Sbjct: 237 DEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDG 296

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
            C  G++    ++F+ +   G  PN+ T++ +++  CK  K+++AF     M     VPD
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           ++ Y+I+IDGLFKA + KE  ++L   +  G+  D V ++++M  +        AV    
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKS 401
            M+  G  P+ ++Y+ LI GL Q  RL +A  L  ++L    +  +  TY+++ID  CK 
Sbjct: 417 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 476

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV--RMTLIPNLFIFNTL 459
           G L+    L D+M   G++ + V  ++ I+ L  +       S+   M  + +   + T+
Sbjct: 477 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTV 536

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVIT-HT--VLIRGIASQGSLSSAILLFFQMLK 516
           + G C+ ++     KL     M  +K   IT HT  +LI        L  A+ L   M++
Sbjct: 537 IIGLCKAEQLDRASKL--AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQ 594

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           RG +P VITY+ +I  L K   +     +F  M   G+      Y VL+  L  +     
Sbjct: 595 RGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKE 654

Query: 577 ALKLFGQLTDRGLEPD 592
           AL++  ++     E D
Sbjct: 655 ALQVLEEMASSDCEID 670



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 176/356 (49%), Gaps = 19/356 (5%)

Query: 93  QFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + GK    F  F +S+   GC      Y+ +I+   +  K  E+ ++   M   GI   P
Sbjct: 334 KHGKVDEAFP-FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI--PP 390

Query: 148 DLV--QRLMS--CLVD--SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMH 201
           D V    LM+  C  +   ++VG    + +A        Y  L++GL +   + +A+ + 
Sbjct: 391 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 450

Query: 202 RQVIQRGFVPNIVTC-NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
            ++++ G V +  T  N I+ RLC  G +  A  L D +   G + N VT++  I+  CK
Sbjct: 451 HEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 510

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVV 319
           E +L++A    +L+ EMD + D + Y+ +I GL KA +L   ++L    +  +GL +   
Sbjct: 511 EGRLDEA---SSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 567

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            F+ ++DA+     +  A+   + M+  G  P+VI+Y+++I  LC+  ++ +A  LF ++
Sbjct: 568 TFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 627

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
            +R +  S ++Y+ LI G C  G+ ++   + + M     + D + C  L   L G
Sbjct: 628 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRG 683



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%)

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    + PDV T+ +LI G+        A  +  +M+ RG+TPD +T+++I+ GL K   
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
                 +  +M      P    YN L++ L K+ N+D A  L  +    G  PD++TY+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 599 IICGYC 604
           +  G C
Sbjct: 121 LADGLC 126



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 1/165 (0%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQ-RGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           Y  ++ GL +   ++ A  + R+++  +G      T N ++       ++  A +L +++
Sbjct: 533 YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELM 592

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  P+V+T++ +I   CK  K++KA++L++ M    +V   + Y++LI GL   GR 
Sbjct: 593 VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRG 652

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           KE  ++L        ++D +    +  A  G G    A +   RM
Sbjct: 653 KEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 255/491 (51%), Gaps = 9/491 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
           K+D++V +F  M     + S     +L+S +   N       L   M+  G       Y 
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            L+N   R+  +  A  +  ++++ G+ PNIVT + +L   C + +I  A +L D + + 
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G +PN VTF+TLI+      K  +A  L + M+     PDL+ Y ++++GL K G     
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             LL       L+  V+++++++D       +  A+  +  M   G  PNV++YS LI  
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC  GR  +A  L   ++ R++ P + T+S+LID F K GKL +   LYD M+KR + P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  S LING      + +A + F   V     P++  +NTL+ G C+ KR  + +++F 
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    +  + +T+ +LI+G+   G    A  +F +M+  G+ P+++TY+ ++ GL K  
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +   + +F+ ++R+ + P I  YN+++  + K   ++    LF  L+ +G++PD++ YN
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 598 TIICGYCSLNS 608
           T+I G+C   S
Sbjct: 541 TMISGFCRKGS 551



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/584 (25%), Positives = 283/584 (48%), Gaps = 39/584 (6%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
           S+  +S+L+ + A A+   ++K+  P P+I  F            ++L+  + + +  DV
Sbjct: 53  SRNGLSELKLDDAVALFGEMVKSR-PFPSIIEF------------SKLLSAIAKMNKFDV 99

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
              + ++M    G  +N +             YS LI  + R  ++  ++ +   M  +G
Sbjct: 100 VISLGEQMQ-NLGIPHNHYT------------YSILINCFCRRSQLPLALAVLGKMMKLG 146

Query: 143 IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIEN 196
               P++V    L++    S  + +   L   M   G+      +  L++GL        
Sbjct: 147 --YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  +  +++ +G  P++VT   ++  LC  G    A +L + +     +P V+ ++T+I+
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK   ++ A  L+  M    + P+++ YS LI  L   GR  + + LL   ++R +  
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           DV  FS+++DA+V  G +  A + YD M+     P++++YS LI G C   RL EA  +F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-- 434
             ++ +   P ++TY++LI GFCK  ++ +G  ++  M +RGL  + V  ++LI GL   
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444

Query: 435 GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           GD   A   F + V   + PN+  +NTL+DG C+  +    + +F  +    ++P + T+
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            ++I G+   G +     LF  +  +G+ PDV+ Y+ +I G  +  +      +FK M+ 
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           +G  P+   YN L+   +++ + +A+ +L  ++   G   D  T
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 199/398 (50%), Gaps = 9/398 (2%)

Query: 221 KRLCING----QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           ++L  NG    ++ +A +LF  ++   P P+++ FS L++A  K  K +    L   M  
Sbjct: 50  EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           + +  +   YSILI+   +  +L     +L   +  G + ++V  SS+++ Y     +  
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           AV   D+M   G+ PN ++++ LI GL    +  EA  L  +++ +  +P L+TY  +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           G CK G     F+L + M +  L+P  ++ + +I+GL     M DAL  F +     + P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+  +++L+   C   R +D  +L   M    I PDV T + LI     +G L  A  L+
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M+KR + P ++TYS++I+G      +     MF+ M      PD+  YN L+    K 
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             ++  +++F +++ RGL  + +TYN +I G      C
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 34/373 (9%)

Query: 169 LCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           L + M  KG       Y  L++ L   G   +A  +   +I+R   P++ T + ++    
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G++  A  L+D ++     P++VT+S+LIN FC   +L++A Q++  M+     PD++
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ LI G  K  R++EG E+      RGL  + V ++ ++      GD   A + +  M
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           ++ G  PN+++Y+ L+ GLC+ G+L +A  +F  +   ++EP++ TY+ +I+G CK+GK+
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
            DG+ L+ N+  +G+KPD V                               +NT++ G C
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVA------------------------------YNTMISGFC 547

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           R     +   LF  M      P+   +  LIR     G   ++  L  +M   G   D  
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607

Query: 525 TYSAIIHGLFKGK 537
           T   + + L  G+
Sbjct: 608 TIGLVTNMLHDGR 620



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 158/365 (43%), Gaps = 34/365 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVL-----------LQSDM-- 79
           N I+  L K  +   A+  FK        PN+   + LI  L           L SDM  
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 80  RDVASHVFD-----KMVIQFGKTYNFFRLF----RDSLGDFGCDYSFLIENYVRIGKIDE 130
           R +   VF         ++ GK     +L+    + S+      YS LI  +    ++DE
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 131 SVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFL 184
           + ++F +M     +  PD+V    L+        V +  ++ R M  +G       Y  L
Sbjct: 380 AKQMFEFMVSKHCF--PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           + GL + G  + A  + ++++  G  PNI+T N +L  LC NG++  A  +F+ L     
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +P + T++ +I   CK  K+E  + L+  +    + PD++ Y+ +I G  + G  +E + 
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           L     + G   +   +++++ A +  GD   + +    M + GF  +  +   L+  + 
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNML 616

Query: 365 QQGRL 369
             GRL
Sbjct: 617 HDGRL 621


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 256/494 (51%), Gaps = 35/494 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ ++R G I+++  I   M   GI  +  +   L++ +  +  + +  ++ + M 
Sbjct: 314 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 373

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L+ G  R   +  AF +  ++ +R   P ++T + I+  LC  G + 
Sbjct: 374 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 433

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
             +++   +++ G KPN V ++TL+ A  KE ++E++  +   M E  ++PD+  Y+ LI
Sbjct: 434 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 493

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  KA R++E    L+  L+R L+ +   + + +D Y   G++  A + ++ ML+ G L
Sbjct: 494 IGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 553

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV  Y+ LI+G C++G + EA  +F  +L RR+   + TYS LI G  ++GK+ + F +
Sbjct: 554 PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGI 613

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +  + ++G                              L+PN F +N+L+ G C+     
Sbjct: 614 FSELQEKG------------------------------LLPNAFTYNSLISGSCKQGNVD 643

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              +L   M +  I PD++T+ +LI G+   G +  A  LF  +  RGLTP+ +TY+A++
Sbjct: 644 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 703

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G  K KN +    + + M   GV PD  IYNV+LN   KE   + AL LF ++ ++G  
Sbjct: 704 DGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF- 762

Query: 591 PDIITYNTIICGYC 604
              +++NT+I GYC
Sbjct: 763 ASTVSFNTLIEGYC 776



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 243/495 (49%), Gaps = 19/495 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  + ++G + ++  +   M +    L  D    L   +VD   V   Y       
Sbjct: 227 YTNMISAHCKVGNVKDAKRVLLEMGEKARLL--DEAIELKRSMVDKGLVPDLY------- 277

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y+ L+NG   +     A  M  ++I  G  P  +T N ++      G I  A  
Sbjct: 278 -----TYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 332

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           + D ++  G + N++ ++TL+N  CK  K+EKA ++   MME  + PD   YS+LI+G  
Sbjct: 333 IKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC 392

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           +   +    ELL     R L   V+ +S +++     G++         M+  G  PN +
Sbjct: 393 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 452

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ L+    ++GR+ E+  +  ++  + + P +  Y+SLI GFCK+ ++ +  +    M
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 512

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           ++R L+P+A      I+G      M  A R+F + +   ++PN+ I+  L++G C+    
Sbjct: 513 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 572

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           T+   +F  +    +  DV T++VLI G++  G +  A  +F ++ ++GL P+  TY+++
Sbjct: 573 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 632

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  K  N+     + + M   G+ PDI  YN+L++ L K   ++ A  LF  +  RGL
Sbjct: 633 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692

Query: 590 EPDIITYNTIICGYC 604
            P+ +TY  ++ GYC
Sbjct: 693 TPNCVTYAAMVDGYC 707



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 234/482 (48%), Gaps = 57/482 (11%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +++ LM+   + G +  A ++        F P++++CN +L  L    ++     +FD +
Sbjct: 156 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGM 215

Query: 240 LLVGPKPNVVTFSTLINAFC-----KEAK------------LEKAFQLYNLMMEMDLVPD 282
                 P+V T++ +I+A C     K+AK            L++A +L   M++  LVPD
Sbjct: 216 CAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPD 275

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           L  Y ILI+G     R +E   +LL  +D GLK + + +++++D ++  GD+ +A +  D
Sbjct: 276 LYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKD 335

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M+  G   N+I ++ L+ G+C+ G++ +A  +  +++ + +EP   TYS LI+G C+  
Sbjct: 336 EMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQ 395

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----------------------------- 433
            +   F L D M KR L P  +  S++INGL                             
Sbjct: 396 NMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYT 455

Query: 434 ---MGDALRFFFQSVRMTL--------IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
                 A     +  RM L        +P++F +N+L+ G C+ KR  +     M M   
Sbjct: 456 TLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLER 515

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            ++P+  T+   I G +  G +  A   F +ML  G+ P+V  Y+A+I G  K  N++  
Sbjct: 516 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 575

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +F+ +    V  D+  Y+VL++ L +   +  A  +F +L ++GL P+  TYN++I G
Sbjct: 576 FSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 635

Query: 603 YC 604
            C
Sbjct: 636 SC 637



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 235/485 (48%), Gaps = 12/485 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    R G +  +  I   M   G+  +  +   LM+       V +   +   MR
Sbjct: 419 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 478

Query: 175 GKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            +G     FC Y  L+ G  +   +E A     ++++R   PN  T    +      G++
Sbjct: 479 EQGILPDVFC-YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A   F+ +L  G  PNV  ++ LI   CKE  + +AF ++  ++   ++ D+  YS+L
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 597

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I GL + G++ E   +     ++GL  +   ++S++      G+V +A Q  + M   G 
Sbjct: 598 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 657

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P++++Y+ILI GLC+ G +  A  LF  +  R L P+ +TY++++DG+CKS      F 
Sbjct: 658 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 717

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRF-----FFQSVRMTLIPNLFIFNTLMDGCC 464
           L + M+ RG+ PDA + ++++N    +  +F      FQ +      +   FNTL++G C
Sbjct: 718 LLEEMLLRGVPPDAFIYNVILNFCCKEE-KFEKALDLFQEMLEKGFASTVSFNTLIEGYC 776

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  +  +   L   M      P+ +T+T LI      G +  A  L+ +M +R + P   
Sbjct: 777 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 836

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY++++HG     N+S    +F+ M   G+ PD   Y V+++   +E N+  A KL  ++
Sbjct: 837 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 896

Query: 585 TDRGL 589
             +G+
Sbjct: 897 LVKGM 901



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 215/450 (47%), Gaps = 16/450 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   I+ Y + G+++ +   F  M   G+  +  +   L+       +V + + + R + 
Sbjct: 524 YGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFIL 583

Query: 175 GK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  L++GL R G +  AF +  ++ ++G +PN  T N ++   C  G + 
Sbjct: 584 SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVD 643

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS L + + + G  P++VT++ LI+  CK  ++E+A  L++ +    L P+ + Y+ ++
Sbjct: 644 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 703

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  K+       +LL   L RG+  D  +++ +++         +A+  +  ML  GF 
Sbjct: 704 DGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF- 762

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            + +S++ LI+G C+ G+L EA  L  +++ ++  P+ +TY+SLID  CK+G + +   L
Sbjct: 763 ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 822

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M +R + P A   + L++G      M +    F + V   + P+   +  ++D  CR
Sbjct: 823 WLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCR 882

Query: 466 LKRATDTVKL---FMLMGM---YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
                +  KL    ++ GM      +  + T +V+ RG    G++  A  +   M+K G 
Sbjct: 883 EGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGW 942

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
             +  +   ++ G   G N     ++ K M
Sbjct: 943 VSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 183/426 (42%), Gaps = 54/426 (12%)

Query: 51  AIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGD 110
           A ++F    +C   PN+   I+  L      +  H  +  V +    + F  L R  L D
Sbjct: 540 ADRYFNEMLSCGVLPNVG--IYTAL------IEGHCKEGNVTEAFSVFRFI-LSRRVLQD 590

Query: 111 FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC 170
               YS LI    R GK+ E+  IF+ + + G+  +      L+S      +V +  +L 
Sbjct: 591 VQT-YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLL 649

Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M  KG       Y  L++GL + G IE A ++   +  RG  PN VT   ++   C +
Sbjct: 650 EEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 709

Query: 227 GQIGNASSLFDVLLLVGPKPNV----------------------------------VTFS 252
                A  L + +LL G  P+                                   V+F+
Sbjct: 710 KNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFN 769

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           TLI  +CK  KL++A  L   M+E   +P+ + Y+ LID   KAG + E   L L   +R
Sbjct: 770 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 829

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            +      ++S++  Y  IG++      ++ M+  G  P+ ++Y ++I   C++G ++EA
Sbjct: 830 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 889

Query: 373 CGLFGQVLIRRLEPS------LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           C L  ++L++ +         L T S +  GF  +G + +   +  +M+K G   +    
Sbjct: 890 CKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSL 949

Query: 427 SLLING 432
             L++G
Sbjct: 950 GDLVDG 955



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 158/343 (46%), Gaps = 57/343 (16%)

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           V+F  +MD+Y  +G +  AV  +    N  F P+++S + L+  L +  ++     +F  
Sbjct: 155 VIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDG 214

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL---------------------------- 410
           +   ++ P + TY+++I   CK G ++D   +                            
Sbjct: 215 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVP 274

Query: 411 ----YD--------------------NMIKRGLKPDAVVCSLLINGLM--GD---ALRFF 441
               YD                     MI  GLKP+ +  + LI+G M  GD   A R  
Sbjct: 275 DLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIK 334

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + V   +  NL I+NTL++G C+  +    +++   M    ++PD  T+++LI G    
Sbjct: 335 DEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG 394

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
            +++ A  L  +M KR L P V+TYS II+GL +  N+     + + M  NG+ P+  +Y
Sbjct: 395 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 454

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             L+    KE  ++ +  +  ++ ++G+ PD+  YN++I G+C
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 497



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN  IF+ LMD   ++    + V +F+    +  +P +++   L+  +     +     +
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNIS-----------------VGLHMFKLMERNG 553
           F  M    + PDV TY+ +I    K  N+                    + + + M   G
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           + PD+  Y++L+N    E     A  +  ++ D GL+P+ ITYN +I G+
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGF 321


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 266/527 (50%), Gaps = 10/527 (1%)

Query: 92   IQFGKTYNFFRLFRDSLGDFGCDY-SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
            I+ G       L R   G    DY   L  N +   K+D++V +F  M     + S    
Sbjct: 639  IKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEF 698

Query: 151  QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             +L+S +   N       L   M+  G       Y  L+N   R+  +  A  +  ++++
Sbjct: 699  SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 758

Query: 207  RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
             G+ PNIVT + +L   C + +I  A +L D + + G +PN VTF+TLI+      K  +
Sbjct: 759  LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 818

Query: 267  AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
            A  L + M+     PDL+ Y ++++GL K G       LL       L+  V+++++++D
Sbjct: 819  AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 878

Query: 327  AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                   +  A+  +  M   G  PNV++YS LI  LC  GR  +A  L   ++ R++ P
Sbjct: 879  GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 938

Query: 387  SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
             + T+S+LID F K GKL +   LYD M+KR + P  V  S LING      + +A + F
Sbjct: 939  DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998

Query: 442  FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
               V     P++  +NTL+ G C+ KR  + +++F  M    +  + +T+ +LI+G+   
Sbjct: 999  EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058

Query: 502  GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
            G    A  +F +M+  G+ P+++TY+ ++ GL K   +   + +F+ ++R+ + P I  Y
Sbjct: 1059 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 1118

Query: 562  NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            N+++  + K   ++    LF  L+ +G++PD++ YNT+I G+C   S
Sbjct: 1119 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 1165



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/584 (25%), Positives = 283/584 (48%), Gaps = 39/584 (6%)

Query: 23   SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
            S+  +S+L+ + A A+   ++K+  P P+I  F            ++L+  + + +  DV
Sbjct: 667  SRNGLSELKLDDAVALFGEMVKSR-PFPSIIEF------------SKLLSAIAKMNKFDV 713

Query: 83   ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
               + ++M    G  +N +             YS LI  + R  ++  ++ +   M  +G
Sbjct: 714  VISLGEQMQ-NLGIPHNHYT------------YSILINCFCRRSQLPLALAVLGKMMKLG 760

Query: 143  IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIEN 196
                P++V    L++    S  + +   L   M   G+      +  L++GL        
Sbjct: 761  --YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 818

Query: 197  AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
            A  +  +++ +G  P++VT   ++  LC  G    A +L + +     +P V+ ++T+I+
Sbjct: 819  AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 878

Query: 257  AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
              CK   ++ A  L+  M    + P+++ YS LI  L   GR  + + LL   ++R +  
Sbjct: 879  GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 938

Query: 317  DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            DV  FS+++DA+V  G +  A + YD M+     P++++YS LI G C   RL EA  +F
Sbjct: 939  DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998

Query: 377  GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-- 434
              ++ +   P ++TY++LI GFCK  ++ +G  ++  M +RGL  + V  ++LI GL   
Sbjct: 999  EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058

Query: 435  GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
            GD   A   F + V   + PN+  +NTL+DG C+  +    + +F  +    ++P + T+
Sbjct: 1059 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 1118

Query: 492  TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             ++I G+   G +     LF  +  +G+ PDV+ Y+ +I G  +  +      +FK M+ 
Sbjct: 1119 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178

Query: 552  NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            +G  P+   YN L+   +++ + +A+ +L  ++   G   D  T
Sbjct: 1179 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 1222



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 158/638 (24%), Positives = 295/638 (46%), Gaps = 85/638 (13%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           NAI+ +L KT     A  FFK        PN+     L++ L  S     A+ +   M I
Sbjct: 297 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-I 355

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +   T N               YS L++ +V+ GK+ E+ E+F  M  M I   PD+V  
Sbjct: 356 KKKITPNVIT------------YSALLDAFVKNGKVLEAKELFEEMVRMSI--DPDIVTY 401

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L++ L   + + +  ++   M  KG       Y  L+NG  +   +E+   + R++ Q
Sbjct: 402 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 461

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           RG V N VT N +++     G +  A   F  +   G  P++ T++ L+   C   +LEK
Sbjct: 462 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 521

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM- 325
           A  ++  M + ++  D++ Y+ +I G+ K G+++E   L  +   +GLK D+V ++++M 
Sbjct: 522 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 581

Query: 326 --------------------------DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                                     D  +  GD+  + +   +ML+ G+ P+++    +
Sbjct: 582 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKD--I 639

Query: 360 IKGLCQQG---------------------------RLVEACGLFGQVLIRRLEPSLLTYS 392
             G+C++                            +L +A  LFG+++  R  PS++ +S
Sbjct: 640 KSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFS 699

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRM 447
            L+    K  K     SL + M   G+  +    S+LIN       +  AL    + +++
Sbjct: 700 KLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL 759

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
              PN+   ++L++G C  KR ++ V L   M +   +P+ +T   LI G+      S A
Sbjct: 760 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 819

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           + L  +M+ +G  PD++TY  +++GL K  +  +  ++   ME+  + P + IYN +++ 
Sbjct: 820 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 879

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L K  ++D AL LF ++  +G+ P+++TY+++I   C+
Sbjct: 880 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 917



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 266/517 (51%), Gaps = 34/517 (6%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG 175
           L+  + R  ++ ++V +   M ++G    PD+V    ++  L  +  V   +   + +  
Sbjct: 264 LVNGFCRRNRVSDAVSLVDKMVEIG--YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 321

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           KG       Y  L+NGL       +A  +   +I++   PN++T + +L     NG++  
Sbjct: 322 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 381

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  LF+ ++ +   P++VT+S+LIN  C   ++++A Q+++LM+    + D++ Y+ LI+
Sbjct: 382 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 441

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G  KA R+++G +L      RGL  + V +++++  +   GDV +A + + +M   G  P
Sbjct: 442 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 501

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           ++ +Y+IL+ GLC  G L +A  +F  +  R ++  ++TY+++I G CK+GK+ + +SL+
Sbjct: 502 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 561

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN--TLMDGCCRLKRA 469
            ++  +GLKPD V  + +++GL    L    +++   +     + N  TL DG   L  +
Sbjct: 562 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITL--S 619

Query: 470 TDTVKLFMLMG-----MYNIKPDVITHTV-LIRGIASQGS----------------LSSA 507
            + +K  +  G     + +IK  V    + L+R  + + S                L  A
Sbjct: 620 AELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDA 679

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           + LF +M+K    P +I +S ++  + K     V + + + M+  G+  +   Y++L+N 
Sbjct: 680 VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 739

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             +   L  AL + G++   G EP+I+T ++++ GYC
Sbjct: 740 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYC 776



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 226/429 (52%), Gaps = 5/429 (1%)

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           E L    LR   + +A  +   +++    P+IV  N++L  +    +     SL   + +
Sbjct: 157 ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 216

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G + ++ TF+ +IN FC   ++  A  +   M+++   PD +    L++G  +  R+ +
Sbjct: 217 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 276

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              L+   ++ G K D+V +++++D+      V  A   +  +   G  PNV++Y+ L+ 
Sbjct: 277 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 336

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GLC   R  +A  L   ++ +++ P+++TYS+L+D F K+GK+ +   L++ M++  + P
Sbjct: 337 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 396

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D V  S LINGL     + +A + F   V    + ++  +NTL++G C+ KR  D +KLF
Sbjct: 397 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 456

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    +  + +T+  LI+G    G +  A   F QM   G++PD+ TY+ ++ GL   
Sbjct: 457 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 516

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +   L +F+ M++  +  DI  Y  ++  + K   ++ A  LF  L+ +GL+PDI+TY
Sbjct: 517 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 576

Query: 597 NTIICGYCS 605
            T++ G C+
Sbjct: 577 TTMMSGLCT 585



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/527 (25%), Positives = 250/527 (47%), Gaps = 38/527 (7%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
            Y+ +I    + GK++E+  +F  +S  G  L PD+V    +MS L     + +   L   
Sbjct: 541  YTTVIRGMCKTGKVEEAWSLFCSLSLKG--LKPDIVTYTTMMSGLCTKGLLHEVEALYTK 598

Query: 173  MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV------TCNKIL------ 220
            M+ +G        +  L  G I  +  + ++++  G+ P+++       C K L      
Sbjct: 599  MKQEGL----MKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAF 654

Query: 221  ---------KRLCING----QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
                     ++L  NG    ++ +A +LF  ++   P P+++ FS L++A  K  K +  
Sbjct: 655  SGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVV 714

Query: 268  FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
              L   M  + +  +   YSILI+   +  +L     +L   +  G + ++V  SS+++ 
Sbjct: 715  ISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNG 774

Query: 328  YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
            Y     +  AV   D+M   G+ PN ++++ LI GL    +  EA  L  +++ +  +P 
Sbjct: 775  YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD 834

Query: 388  LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
            L+TY  +++G CK G     F+L + M +  L+P  ++ + +I+GL     M DAL  F 
Sbjct: 835  LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 894

Query: 443  QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
            +     + PN+  +++L+   C   R +D  +L   M    I PDV T + LI     +G
Sbjct: 895  EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 954

Query: 503  SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
             L  A  L+ +M+KR + P ++TYS++I+G      +     MF+ M      PD+  YN
Sbjct: 955  KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 1014

Query: 563  VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             L+    K   ++  +++F +++ RGL  + +TYN +I G      C
Sbjct: 1015 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 1061



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 34/373 (9%)

Query: 169  LCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
            L + M  KG       Y  L++ L   G   +A  +   +I+R   P++ T + ++    
Sbjct: 892  LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 951

Query: 225  INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
              G++  A  L+D ++     P++VT+S+LIN FC   +L++A Q++  M+     PD++
Sbjct: 952  KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 1011

Query: 285  IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
             Y+ LI G  K  R++EG E+      RGL  + V ++ ++      GD   A + +  M
Sbjct: 1012 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 1071

Query: 345  LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
            ++ G  PN+++Y+ L+ GLC+ G+L +A  +F  +   ++EP++ TY+ +I+G CK+GK+
Sbjct: 1072 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 1131

Query: 405  RDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
             DG+ L+ N+  +G+KPD V                               +NT++ G C
Sbjct: 1132 EDGWDLFCNLSLKGVKPDVVA------------------------------YNTMISGFC 1161

Query: 465  RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
            R     +   LF  M      P+   +  LIR     G   ++  L  +M   G   D  
Sbjct: 1162 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 1221

Query: 525  TYSAIIHGLFKGK 537
            T   + + L  G+
Sbjct: 1222 TIGLVTNMLHDGR 1234



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 158/365 (43%), Gaps = 34/365 (9%)

Query: 36   NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVL-----------LQSDM-- 79
            N I+  L K  +   A+  FK        PN+   + LI  L           L SDM  
Sbjct: 874  NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 933

Query: 80   RDVASHVFD-----KMVIQFGKTYNFFRLF----RDSLGDFGCDYSFLIENYVRIGKIDE 130
            R +   VF         ++ GK     +L+    + S+      YS LI  +    ++DE
Sbjct: 934  RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 993

Query: 131  SVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFL 184
            + ++F +M     +  PD+V    L+        V +  ++ R M  +G       Y  L
Sbjct: 994  AKQMFEFMVSKHCF--PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051

Query: 185  MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
            + GL + G  + A  + ++++  G  PNI+T N +L  LC NG++  A  +F+ L     
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111

Query: 245  KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
            +P + T++ +I   CK  K+E  + L+  +    + PD++ Y+ +I G  + G  +E + 
Sbjct: 1112 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 1171

Query: 305  LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
            L     + G   +   +++++ A +  GD   + +    M + GF  +  +   L+  + 
Sbjct: 1172 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNML 1230

Query: 365  QQGRL 369
              GRL
Sbjct: 1231 HDGRL 1235



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 55/104 (52%)

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L+ AI LF  M+K    P ++ ++ ++  + K K   V + + K ME  G+  D+  +N+
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           ++N       +  AL + G++   G EPD +T  +++ G+C  N
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 272


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 260/501 (51%), Gaps = 13/501 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +++   R GK+DE+ E+F  M + G   +      L++ L    ++ + YKL   M 
Sbjct: 48  YTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMA 107

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG+      Y  +++GL R G +  A      +  RG+ P++V  N +L  L   G++ 
Sbjct: 108 SKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVA 167

Query: 231 NASSLFDVLLLVGPK--PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            A  LF  + +   K  P+++T++TLI+ FC+  K ++A +L+  ++    +PD + Y+ 
Sbjct: 168 EAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNS 227

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++ GL +   + E  E+    +D G   +   +S V+  +  +G++ R ++ Y+ M    
Sbjct: 228 ILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKR 287

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F P+V+  + +I  LC+  ++ +A  +  ++      P ++TY+ L+DG CK+  +    
Sbjct: 288 FSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 347

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M+  G  PD V  S+++NGL     + DA   F + +   L+P++  FN LMDG 
Sbjct: 348 ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 407

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +  +   L  +M  +N+ PD +T T L+ G+        A+ LF  M+++G   DV
Sbjct: 408 CKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADV 467

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNG--VAPDIAIYNVLLNMLIKECNLDAALKLF 581
           + ++ ++ GL +   ++  L  FK M ++    +PD+  Y  L+N LI+   +D A+  F
Sbjct: 468 LPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYF 527

Query: 582 GQLTDRGLEPDIITYNTIICG 602
            Q+T  G  PD + YNT++ G
Sbjct: 528 QQMTGSGCAPDYVAYNTLMNG 548



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 279/592 (47%), Gaps = 67/592 (11%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           + I++ L KT   T A++  +       +P++A    ++  L ++   D A  +F KM+ 
Sbjct: 14  STIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIE 73

Query: 93  Q---------------FGKTYNFFRLFR--DSLGDFGCD-----YSFLIENYVRIGKIDE 130
           +                 K  N  R ++  + +   G +     Y+ ++    R+GK+ E
Sbjct: 74  RGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSE 133

Query: 131 SVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMR------GKGFCVYE 182
           + + F  M   G   SPD+V    L+  L     V + + L + M             Y 
Sbjct: 134 AKQFFDSMPSRG--YSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYN 191

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            L++G  R    + A  + + VI +G++P+ VT N IL  L     +  A  +F  ++  
Sbjct: 192 TLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDS 251

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  PN  T+S +++  C+   + +  +LY  M E    PD+++ + +ID L KA ++ + 
Sbjct: 252 GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           +++L      G   DVV ++ ++D       V +A + +  M++ G  P+++SYS+++ G
Sbjct: 312 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 371

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC+  ++ +A  LF +++ R+L P ++T++ L+DG CK+GKL +   L D M +  + PD
Sbjct: 372 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPD 431

Query: 423 AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            V C+                              TLM G CR KR  + V+LF  M   
Sbjct: 432 GVTCT------------------------------TLMHGLCRDKRTDEAVRLFQYMVEK 461

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG--LTPDVITYSAIIHGLFKGKNIS 540
               DV+ H +++ G+  +G L+ A+L F  M+K     +PDV+TY+ +++ L +   + 
Sbjct: 462 GTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVD 521

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
             +  F+ M  +G APD   YN L+N L K+     A +L   + ++G   D
Sbjct: 522 QAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 222/406 (54%), Gaps = 7/406 (1%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           ++GF P++VT + I+  LC  G++  A  + + +   G  P+V T++ +++  C+  K++
Sbjct: 3   EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD 62

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A +L++ M+E     + + Y+ LI+GL K   ++   +LL     +G + D + +++++
Sbjct: 63  EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL 122

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI--RR 383
                +G V  A Q +D M + G+ P+V++Y+ L+  L ++G++ EA GLF  + +  R+
Sbjct: 123 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           + P L+TY++LIDGFC+  K  +   L+ ++I +G  PD V  + ++ GL     M +A 
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F + V     PN   ++ ++ G CR+      ++L+  M      PDV+    +I  +
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDML 302

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                +  A  +  +M K G  PDV+TY+ ++ GL K   +     +F  M  NG APDI
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 362

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             Y+V+LN L K   +  A  LF ++ +R L PD++T+N ++ G C
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLC 408



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 262/515 (50%), Gaps = 43/515 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    + GK+ E++E+   M++ G+  +PD+                         
Sbjct: 13  YSTIISGLCKTGKVTEALEMVEEMTEKGV--NPDVA------------------------ 46

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  +++ L R G ++ A  +  ++I+RG   N V  N ++  LC +  I  A  
Sbjct: 47  -----TYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYK 101

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G +P+ +T++T+++  C+  K+ +A Q ++ M      PD++ Y+ L+D L+
Sbjct: 102 LLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY 161

Query: 295 KAGRLKEGNELLLTA--LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           K G++ E   L  T    DR +  D++ +++++D +  +     A++ +  ++  G++P+
Sbjct: 162 KEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPD 221

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
            ++Y+ ++ GL ++  + EA  +F +++     P+  TYS ++ G C+ G +     LY+
Sbjct: 222 TVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYE 281

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M ++   PD ++C+ +I+ L     + DA +   +  ++  +P++  +N L+DG C+  
Sbjct: 282 EMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTN 341

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
                 +LF  M      PD+++++V++ G+     +  A +LF +M++R L PDV+T++
Sbjct: 342 LVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 401

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++ GL K   +     +  +M  + V PD      L++ L ++   D A++LF  + ++
Sbjct: 402 ILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK 461

Query: 588 GLEPDIITYNTIICGYC---SLNSCLIDGYFKSQI 619
           G   D++ +N ++ G C    L   L+  +FKS +
Sbjct: 462 GTVADVLPHNIVLAGLCREGKLAQALL--FFKSMV 494



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 204/372 (54%), Gaps = 7/372 (1%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G +P+VVT+ST+I+  CK  K+ +A ++   M E  + PD+  Y+I++D L +AG++ E 
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           +EL    ++RG   + V ++++++      ++ RA +  + M + G+ P+ I+Y+ ++ G
Sbjct: 65  DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD--NMIKRGLK 420
           LC+ G++ EA   F  +  R   P ++ Y+ L+D   K GK+ + + L+   +M  R + 
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD +  + LI+G        +A++ F   +    +P+   +N+++ G  R     +  ++
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 244

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M      P+  T+++++ G    G+++  + L+ +M ++  +PDV+  +A+I  L K
Sbjct: 245 FKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCK 304

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            K +     + + M + G  PD+  YN+LL+ L K   +D A +LF  + D G  PDI++
Sbjct: 305 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 364

Query: 596 YNTIICGYCSLN 607
           Y+ ++ G C  N
Sbjct: 365 YSVVLNGLCKTN 376



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M E    PD++ YS +I GL K G++ E  E++    ++G+  DV  ++ ++D     G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           V  A + + +M+  G   N ++Y+ LI GLC+   +  A  L  ++  +  EP  +TY++
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA----LRFFFQSVRMT- 448
           ++ G C+ GK+ +    +D+M  RG  PD V  + L++ L  +         F+++ M  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 449 --LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             + P+L  +NTL+DG CR+++  + +KLF  +      PD +T+  ++ G+A + ++  
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +F +M+  G  P+  TYS ++ G  +  N++  L +++ M     +PD+ + N +++
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           ML K   +D A K+  +++  G  PD++TYN ++ G C  N
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTN 341


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 260/492 (52%), Gaps = 11/492 (2%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
           K+D++V +F  M     + S     +L+S +   N       L   M+  G       Y 
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            L+N   R+  +  A  +  ++++ G+ PNIVT + +L   C + +I  A +L D + + 
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G +PN VTF+TLI+      K  +A  L + M+     PDL+ Y ++++GL K G     
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 303 NELLLTALDRG-LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             +LL  +++G L+  V+++++++D       +  A+  +  M   G  PNV++YS LI 
Sbjct: 241 F-ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
            LC  GR  +A  L   ++ R++ P + T+S+LID F K GKL +   LYD M+KR + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
             V  S LING      + +A + F   V     P++  ++TL+ G C+ KR  + ++LF
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    +  + +T+T LI+G+   G    A  +F +M+  G+ P+++TY+ ++ GL K 
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +   + +F+ ++R+ + P I  YN+++  + K   ++    LF  L+ +G++PD++ Y
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539

Query: 597 NTIICGYCSLNS 608
           NT+I G+C   S
Sbjct: 540 NTMISGFCRKGS 551



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 282/584 (48%), Gaps = 39/584 (6%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
           S+  +S+L+ + A A+   ++K+  P P+I  F            ++L+  + + +  DV
Sbjct: 53  SRNGLSELKLDDAVALFGEMVKSR-PFPSIIEF------------SKLLSAIAKMNKFDV 99

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
              + ++M    G  +N +             YS LI  + R  ++  ++ +   M  +G
Sbjct: 100 VISLGEQMQ-NLGMPHNHYT------------YSILINCFCRRSQLPLALAVLGKMMKLG 146

Query: 143 IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIEN 196
               P++V    L++    S  + +   L   M   G+      +  L++GL        
Sbjct: 147 --YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  +  +++ +G  P++VT   ++  LC  G    A  L + +     +P V+ ++T+I+
Sbjct: 205 AVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIID 264

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK   ++ A  L+  M    + P+++ YS LI  L   GR  + + LL   ++R +  
Sbjct: 265 GLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           DV  FS+++DA+V  G +  A + YD M+     P++++YS LI G C   RL EA  +F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-- 434
             ++ +   P +++YS+LI GFCK+ ++ +G  L+  M +RGL  + V  + LI GL   
Sbjct: 385 EFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQA 444

Query: 435 GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           GD   A   F + V   + PN+  +NTL+DG C+  +    + +F  +    ++P + T+
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            ++I G+   G +     LF  +  +G+ PDV+ Y+ +I G  +  +      +FK M+ 
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           +G  P+   YN L+   +++ + +A+ +L  ++   G   D  T
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 226/440 (51%), Gaps = 6/440 (1%)

Query: 171 RAMRGKGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           RA  GK    Y E L    L +  +++A  +  ++++    P+I+  +K+L  +    + 
Sbjct: 38  RAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKF 97

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
               SL + +  +G   N  T+S LIN FC+ ++L  A  +   MM++   P+++  S L
Sbjct: 98  DVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSL 157

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++G   + R+ E   L+      G + + V F++++           AV   DRM+  G 
Sbjct: 158 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGC 217

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P++++Y +++ GLC++G    A  L  ++   +LEP +L Y+++IDG CK+  + D  +
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALN 277

Query: 410 LYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L+  M  +G++P+ V  S LI+     G   DA R     +   + P++F F+ L+D   
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  +  +  KL+  M   +I P ++T++ LI G      L  A  +F  M+ +   PDV+
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           +YS +I G  K K +  G+ +F+ M + G+  +   Y  L+  L +  + D A ++F ++
Sbjct: 398 SYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEM 457

Query: 585 TDRGLEPDIITYNTIICGYC 604
              G+ P+I+TYNT++ G C
Sbjct: 458 VSDGVPPNIMTYNTLLDGLC 477



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 223/462 (48%), Gaps = 9/462 (1%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S L+  Y    +I E+V +   M   G   +      L+  L   N   +   L   M  
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 214

Query: 176 KG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           KG       Y  ++NGL ++G  + AF +  ++ Q    P ++    I+  LC N  + +
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDD 274

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A +LF  +   G +PNVVT+S+LI+  C   +   A +L + M+E  + PD+  +S LID
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
              K G+L E  +L    + R +   +V +SS+++ +     +  A Q ++ M++    P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V+SYS LIKG C+  R+ E   LF ++  R L  + +TY++LI G  ++G       ++
Sbjct: 395 DVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIF 454

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M+  G+ P+ +  + L++GL     +  A+  F    R  + P ++ +N +++G C+ 
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  D   LF  + +  +KPDV+ +  +I G   +GS   A  LF +M + G  P+   Y
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           + +I    +  +      + K M   G A D +   ++ NML
Sbjct: 575 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 208/433 (48%), Gaps = 23/433 (5%)

Query: 200 MHRQVIQRGFVPNIV--------------TCNKILKRLCING----QIGNASSLFDVLLL 241
           +HR ++ RG V  +               T     ++L  NG    ++ +A +LF  ++ 
Sbjct: 15  VHRSLVVRGNVATVSPSFSFFWRRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVK 74

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
             P P+++ FS L++A  K  K +    L   M  + +  +   YSILI+   +  +L  
Sbjct: 75  SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPL 134

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              +L   +  G + ++V  SS+++ Y     +  AV   D+M   G+ PN ++++ LI 
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GL    +  EA  L  +++ +  +P L+TY  +++G CK G     F L + M +  L+P
Sbjct: 195 GLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEP 254

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
             ++ + +I+GL     M DAL  F +     + PN+  +++L+   C   R +D  +L 
Sbjct: 255 GVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    I PDV T + LI     +G L  A  L+ +M+KR + P ++TYS++I+G    
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +     MF+ M      PD+  Y+ L+    K   +D  ++LF +++ RGL  + +TY
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434

Query: 597 NTIICGYCSLNSC 609
            T+I G      C
Sbjct: 435 TTLIQGLFQAGDC 447



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 9/261 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           YS LI  +    ++DE+ ++F +M     +  PD+V    L+     +  V +  +L R 
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCF--PDVVSYSTLIKGFCKAKRVDEGMELFRE 421

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ GL + G  + A  + ++++  G  PNI+T N +L  LC NG+
Sbjct: 422 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F+ L     +P + T++ +I   CK  K+E  + L+  +    + PD++ Y+ 
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I G  + G  +E + L     + G   +   +++++ A +  GD   + +    M + G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601

Query: 349 FLPNVISYSILIKGLCQQGRL 369
           F  +  +   L+  +   GRL
Sbjct: 602 FAGDASTIG-LVTNMLHDGRL 621


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 251/487 (51%), Gaps = 9/487 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
           K D+++++F  M       +     RL S +  +        LC+ M  KG         
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            ++N   R   +  AF    ++I+ G+ PN +T + ++  LC+ G++  A  L D ++ +
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G KP+++T +TL+N  C   K  +A  L + M+E    P+ + Y  +++ + K+G+    
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            ELL    +R +KLD V +S ++D     G +  A   ++ M   G   N+I+Y+ILI G
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C  GR  +   L   ++ R++ P+++T+S LID F K GKLR+   L+  MI RG+ PD
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            +  + LI+G      +  A +     V     PN+  FN L++G C+  R  D ++LF 
Sbjct: 466 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 525

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M +  +  D +T+  LI+G    G L+ A  LF +M+ R + P+++TY  ++ GL    
Sbjct: 526 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 585

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
                L +F+ +E++ +  DI IYN++++ +     +D A  LF  L  +G++P + TYN
Sbjct: 586 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 645

Query: 598 TIICGYC 604
            +I G C
Sbjct: 646 IMIGGLC 652



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 228/461 (49%), Gaps = 40/461 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL  +G +  A  +  ++++ G  P+++T N ++  LC++G+   A  L D +
Sbjct: 258 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 317

Query: 240 LLVGPKPNVVTF-----------------------------------STLINAFCKEAKL 264
           +  G +PN VT+                                   S +I+  CK   L
Sbjct: 318 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 377

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           + AF L+N M    +  ++I Y+ILI G   AGR  +G +LL   + R +  +VV FS +
Sbjct: 378 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 437

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D++V  G +  A + +  M++ G  P+ I+Y+ LI G C++  L +A  +   ++ +  
Sbjct: 438 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 497

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
           +P++ T++ LI+G+CK+ ++ DG  L+  M  RG+  D V  + LI G      +  A  
Sbjct: 498 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 557

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F + V   + PN+  +  L+DG C    +   +++F  +    ++ D+  + ++I G+ 
Sbjct: 558 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 617

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
           +   +  A  LF  +  +G+ P V TY+ +I GL K   +S    +F+ ME +G APD  
Sbjct: 618 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 677

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            YN+L+   + + +   ++KL  +L   G   D  T   +I
Sbjct: 678 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 718



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 241/465 (51%), Gaps = 13/465 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           +S LI      G++ E++E+   M +MG    PDL+    L++ L  S    +   L   
Sbjct: 259 FSTLINGLCLEGRVSEALELVDRMVEMG--HKPDLITINTLVNGLCLSGKEAEAMLLIDK 316

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  ++N + + G    A  + R++ +R    + V  + I+  LC +G 
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + NA +LF+ + + G   N++T++ LI  FC   + +   +L   M++  + P+++ +S+
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 436

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID   K G+L+E  EL    + RG+  D + ++S++D +     + +A Q  D M++ G
Sbjct: 437 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 496

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN+ +++ILI G C+  R+ +   LF ++ +R +    +TY++LI GFC+ GKL    
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 556

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M+ R + P+ V   +L++GL  +     AL  F +  +  +  ++ I+N ++ G 
Sbjct: 557 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 616

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C   +  D   LF  + +  +KP V T+ ++I G+  +G LS A LLF +M + G  PD 
Sbjct: 617 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 676

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            TY+ +I       + +  + + + ++R G + D +   ++++ML
Sbjct: 677 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 205/427 (48%), Gaps = 44/427 (10%)

Query: 189 LRKGVIE----NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           LR G+++    +A  + R +I    +P ++  +++   +    Q     +L   + L G 
Sbjct: 158 LRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGI 217

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
             N+ T S +IN FC+  KL  AF     ++++   P+ I +S LI+GL   GR      
Sbjct: 218 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR------ 271

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
                                        V  A++  DRM+  G  P++I+ + L+ GLC
Sbjct: 272 -----------------------------VSEALELVDRMVEMGHKPDLITINTLVNGLC 302

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
             G+  EA  L  +++    +P+ +TY  +++  CKSG+      L   M +R +K DAV
Sbjct: 303 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 362

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             S++I+GL     + +A   F +     +  N+  +N L+ G C   R  D  KL   M
Sbjct: 363 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 422

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               I P+V+T +VLI     +G L  A  L  +M+ RG+ PD ITY+++I G  K  ++
Sbjct: 423 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 482

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                M  LM   G  P+I  +N+L+N   K   +D  L+LF +++ RG+  D +TYNT+
Sbjct: 483 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542

Query: 600 ICGYCSL 606
           I G+C L
Sbjct: 543 IQGFCEL 549



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 210/421 (49%), Gaps = 9/421 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----Y 181
           GK  E++ +   M + G   +      +++ +  S       +L R M  +   +    Y
Sbjct: 305 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 364

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +++GL + G ++NAF++  ++  +G   NI+T N ++   C  G+  + + L   ++ 
Sbjct: 365 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 424

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
               PNVVTFS LI++F KE KL +A +L+  M+   + PD I Y+ LIDG  K   L +
Sbjct: 425 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 484

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
            N+++   + +G   ++  F+ +++ Y     +   ++ + +M   G + + ++Y+ LI+
Sbjct: 485 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 544

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C+ G+L  A  LF +++ R++ P+++TY  L+DG C +G+      +++ + K  ++ 
Sbjct: 545 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 604

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D  + +++I+G+     + DA   F       + P +  +N ++ G C+    ++   LF
Sbjct: 605 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 664

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M      PD  T+ +LIR     G  + ++ L  ++ + G + D  T   +I  L   
Sbjct: 665 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDD 724

Query: 537 K 537
           K
Sbjct: 725 K 725



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 170/350 (48%), Gaps = 5/350 (1%)

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           K + A  L+  M+    +P +I +S L   + K  +      L      +G+  ++   S
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            +++ +     +  A     +++  G+ PN I++S LI GLC +GR+ EA  L  +++  
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDA 437
             +P L+T ++L++G C SGK  +   L D M++ G +P+AV    ++N     G    A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           +    +     +  +   ++ ++DG C+     +   LF  M M  I  ++IT+ +LI G
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
             + G       L   M+KR + P+V+T+S +I    K   +     + K M   G+APD
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
              Y  L++   KE +LD A ++   +  +G +P+I T+N +I GYC  N
Sbjct: 466 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 515



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 148/327 (45%), Gaps = 31/327 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S LI+++V+ GK+ E+ E+   M   GI  +PD +                        
Sbjct: 434 FSVLIDSFVKEGKLREAEELHKEMIHRGI--APDTI------------------------ 467

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++G  ++  ++ A  M   ++ +G  PNI T N ++   C   +I +   
Sbjct: 468 -----TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 522

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF  + L G   + VT++TLI  FC+  KL  A +L+  M+   + P+++ Y IL+DGL 
Sbjct: 523 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 582

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             G  ++  E+        ++LD+ +++ ++        V  A   +  +   G  P V 
Sbjct: 583 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 642

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+I+I GLC++G L EA  LF ++      P   TY+ LI      G       L + +
Sbjct: 643 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 702

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFF 441
            + G   DA    ++I+ L  D   +F
Sbjct: 703 KRCGFSVDASTIKMVIDMLSDDKANYF 729



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 2/158 (1%)

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           NL+  + +++  CR ++          +     +P+ IT + LI G+  +G +S A+ L 
Sbjct: 220 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 279

Query: 512 FQMLKRGLTPDVITYSAIIHGL-FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
            +M++ G  PD+IT + +++GL   GK     L + K++E  G  P+   Y  +LN++ K
Sbjct: 280 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCK 338

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
                 A++L  ++ +R ++ D + Y+ II G C   S
Sbjct: 339 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/517 (29%), Positives = 264/517 (51%), Gaps = 27/517 (5%)

Query: 115 YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YYK 168
           YSF  LI+ +    K+  ++  F  ++ +G + S      L+  L   + V +    +++
Sbjct: 112 YSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ 171

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +C+         +  LMNGL R+G +  A  +  ++++ G  PN +T   I+  +C  G 
Sbjct: 172 ICKP----NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 227

Query: 229 IGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
             +A +L   +  V   KPNVV +S +I+   K+ +   A  L++ M E  + P+L  Y+
Sbjct: 228 TVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYN 287

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +I+G   +GR  E   LL    +R +  DVV FS +++A V  G    A + Y+ ML  
Sbjct: 288 CMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR 347

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +PN I+Y+ +I G  +Q RL  A  +F  +  +   P ++T+S LIDG+C + ++ DG
Sbjct: 348 GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDG 407

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L   M +RGL  + +  + LI+G      +  AL    + +   + PN+   NTL+DG
Sbjct: 408 MKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDG 467

Query: 463 CCRLKRATDTVKLFMLM-----------GMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
            C   +  D +++F +M              +++PDV T+ +LI G+ ++G  S A  L+
Sbjct: 468 LCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELY 527

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M  RGL PD ITY+++I GL K   +     MF  M   G +PD+  +  L+N   K 
Sbjct: 528 EEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKV 587

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
             +   L++F ++  RG+  + ITY T+I G+C + +
Sbjct: 588 GRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGN 624



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 233/479 (48%), Gaps = 22/479 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L+    R G++ E+V +   M + G+  +      ++  +           L R M 
Sbjct: 180 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 239

Query: 175 -----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
                     +Y  +++GL + G   +A ++  ++ ++G  PN+ T N ++   C +G+ 
Sbjct: 240 EVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRW 299

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  L   +      P+VVTFS LINA  KE K  +A +LYN M+   ++P+ I Y+ +
Sbjct: 300 SEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSM 359

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDG  K  RL     +      +G   DV+ FS ++D Y G   V   ++    M   G 
Sbjct: 360 IDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGL 419

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           + N I+Y+ LI G CQ G L  A  L  +++   + P+++T ++L+DG C +GKL+D   
Sbjct: 420 VANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALE 479

Query: 410 LYDNMIKRGLKPDA----------------VVCSLLINGLMGDALRFFFQSVRMTLIPNL 453
           ++  M K  +  DA                ++C L+  G   +A   + +     L+P+ 
Sbjct: 480 MFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDT 539

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +N+++DG C+  R  +  ++F  MG     PDV+T T LI G    G +   + +F +
Sbjct: 540 ITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCE 599

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD-IAIYNVLLNMLIKE 571
           M +RG+  + ITY  +IHG  +  NI+  L +F+ M  +GV PD I I N+L  +  KE
Sbjct: 600 MGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 658



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 260/548 (47%), Gaps = 87/548 (15%)

Query: 109 GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK 168
           G FG +   L   +  I  +D+++++F YM          +  R + C++D         
Sbjct: 38  GGFGGERLKLQSGFHEIKGLDDAIDLFGYM----------VRSRPLPCVID--------- 78

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
                    FC    L+  ++R    +    +HR++  R    NI +   ++K  C   +
Sbjct: 79  ---------FCK---LLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSK 126

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A S F  +  +G  P++VTFSTL++  C E ++ +A   ++ + +    P++I ++ 
Sbjct: 127 LPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTT 182

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L++GL + GR+ E   LL   ++ GL+ + + + +++D    +GD   A+    +M    
Sbjct: 183 LMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVS 242

Query: 349 FL-PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
            + PNV+ YS +I GL + GR  +A  LF ++  + + P+L TY+ +I+GFC SG+  + 
Sbjct: 243 RIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEA 302

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L   M +R + PD V  S+LIN L+      +A   + + +   +IPN   +N+++DG
Sbjct: 303 QRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDG 362

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +  R     ++F LM      PDVIT ++LI G      +   + L  +M +RGL  +
Sbjct: 363 FSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVAN 422

Query: 523 VITYSAIIHGLFKGKNISV-----------------------------------GLHMFK 547
            ITY+ +IHG  +  N++                                     L MFK
Sbjct: 423 TITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFK 482

Query: 548 LMER-----------NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
           +M++           N V PD+  YN+L+  LI E     A +L+ ++  RGL PD ITY
Sbjct: 483 VMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITY 542

Query: 597 NTIICGYC 604
           N++I G C
Sbjct: 543 NSVIDGLC 550



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/560 (25%), Positives = 265/560 (47%), Gaps = 55/560 (9%)

Query: 17  KCYCSESK--------THISDLQFNQA----NAILANLIKTNNPTPAIQFFKWTHNCVSS 64
           KC+CS SK          I+ L F+ +    + +L  L   +  + A+ FF      +  
Sbjct: 119 KCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ----ICK 174

Query: 65  PNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           PN+     L++ L +      A  + D+MV              D L      Y  +++ 
Sbjct: 175 PNVIAFTTLMNGLCREGRVVEAVALLDRMV-------------EDGLQPNQITYGTIVDG 221

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC 179
             ++G    ++ +   M ++   + P++V    ++  L           L   M+ KG  
Sbjct: 222 MCKMGDTVSALNLLRKMEEVS-RIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS 280

Query: 180 ----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                Y  ++NG    G    A  + R++ +R   P++VT + ++  L   G+   A  L
Sbjct: 281 PNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEEL 340

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           ++ +L  G  PN +T++++I+ F K+ +L+ A +++ LM      PD+I +SILIDG   
Sbjct: 341 YNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCG 400

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           A R+ +G +LL     RGL  + + +++++  +  +G++  A+     M++ G  PNV++
Sbjct: 401 AKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVT 460

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRL-----------EPSLLTYSSLIDGFCKSGKL 404
            + L+ GLC  G+L +A  +F  +   ++           EP + TY+ LI G    GK 
Sbjct: 461 CNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKF 520

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
            +   LY+ M  RGL PD +  + +I+GL     + +A + F         P++  F TL
Sbjct: 521 SEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTL 580

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           ++G C++ R  D +++F  MG   I  + IT+  LI G    G+++ A+ +F +M+  G+
Sbjct: 581 INGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGV 640

Query: 520 TPDVITYSAIIHGLFKGKNI 539
            PD IT   ++ GL+  + +
Sbjct: 641 YPDTITIRNMLTGLWSKEEL 660



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 195/385 (50%), Gaps = 12/385 (3%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP-DLIIYSIL 289
           +A  LF  ++   P P V+ F  L+    +  + +    L+   MEM  +P ++  ++IL
Sbjct: 59  DAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHR-KMEMRRIPCNIYSFTIL 117

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I       +L             G    +V FS+++        V  A+  + ++     
Sbjct: 118 IKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK--- 174

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            PNVI+++ L+ GLC++GR+VEA  L  +++   L+P+ +TY +++DG CK G      +
Sbjct: 175 -PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233

Query: 410 LYDNMIK-RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           L   M +   +KP+ V+ S +I+GL       DA   F +     + PNLF +N +++G 
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C   R ++  +L   M    + PDV+T +VLI  +  +G    A  L+ +ML RG+ P+ 
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT 353

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           ITY+++I G  K   +     MF LM   G +PD+  +++L++       +D  +KL  +
Sbjct: 354 ITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHE 413

Query: 584 LTDRGLEPDIITYNTIICGYCSLNS 608
           ++ RGL  + ITY T+I G+C L +
Sbjct: 414 MSRRGLVANTITYTTLIHGFCQLGN 438



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 23/310 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLC 170
           Y+ +I+ + +  ++D +  +F  M+  G   SPD++    S L+D    +  V    KL 
Sbjct: 356 YNSMIDGFSKQNRLDAAERMFYLMATKGC--SPDVIT--FSILIDGYCGAKRVDDGMKLL 411

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M  +G       Y  L++G  + G +  A  + +++I  G  PN+VTCN +L  LC N
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN 471

Query: 227 GQIGNASSLFDV-------LLLVGP----KPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
           G++ +A  +F V       L    P    +P+V T++ LI     E K  +A +LY  M 
Sbjct: 472 GKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMP 531

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
              LVPD I Y+ +IDGL K  RL E  ++  +   +G   DVV F+++++ Y  +G VG
Sbjct: 532 HRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVG 591

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
             ++ +  M   G + N I+Y  LI G CQ G +  A  +F +++   + P  +T  +++
Sbjct: 592 DGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNML 651

Query: 396 DGFCKSGKLR 405
            G     +L+
Sbjct: 652 TGLWSKEELK 661



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 110/240 (45%), Gaps = 15/240 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + ++G ++ ++++   M   G+  +      L+  L ++  +    ++ + M+
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQ 485

Query: 175 GKGF---------------CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
                                Y  L+ GL+ +G    A  ++ ++  RG VP+ +T N +
Sbjct: 486 KSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSV 545

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  LC   ++  A+ +FD +   G  P+VVTF+TLIN +CK  ++    +++  M    +
Sbjct: 546 IDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGI 605

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           V + I Y  LI G  + G +    ++    +  G+  D +   +++       ++ RAVQ
Sbjct: 606 VANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 15/204 (7%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYL---------SPDLVQR--LMSCLVDSNSVGQY 166
           L++     GK+ +++E+F  M    + L          PD+     L+  L++     + 
Sbjct: 464 LLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEA 523

Query: 167 YKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
            +L   M  +G       Y  +++GL ++  ++ A  M   +  +GF P++VT   ++  
Sbjct: 524 EELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLING 583

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
            C  G++G+   +F  +   G   N +T+ TLI+ FC+   +  A  ++  M+   + PD
Sbjct: 584 YCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPD 643

Query: 283 LIIYSILIDGLFKAGRLKEGNELL 306
            I    ++ GL+    LK   + L
Sbjct: 644 TITIRNMLTGLWSKEELKRAVQCL 667


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/568 (26%), Positives = 293/568 (51%), Gaps = 40/568 (7%)

Query: 47  NPTPAI-QFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFR 105
           NP P+I +F K+  +       + ++++  Q D+              FG T+  + L  
Sbjct: 88  NPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDL--------------FGVTHTVYSL-- 131

Query: 106 DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSN-- 161
                     + LI    R+  +D +V ++  M  +GI   PD++    L++ + +    
Sbjct: 132 ----------NILINCLCRLNHVDFAVSVWGKMFKLGI--QPDVITFTTLINGVCNEGKI 179

Query: 162 --SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
             +V  Y ++ R+        Y  L+NGL   G    A H+ +++ Q G  PN+VT N I
Sbjct: 180 KVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTI 239

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  LC +  + +A      ++  G  P+ +T++++++  C   +L +A +L+  M +   
Sbjct: 240 IDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGC 299

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            PD++ Y+I+ID L+K   + +  + L   +D+G+  DVV +++++     +G +  A++
Sbjct: 300 KPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIR 359

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            + +M   G  P+V++Y+ +I  LC+   + +A     +++ R + P+ +TYS+++ GFC
Sbjct: 360 LFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFC 419

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL----RFFFQSVRMTLI-PNLF 454
             G+L +   L+  M+ R + P+ +  S+L++GL  + +    R+ F+++    + PN++
Sbjct: 420 NLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIY 479

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +N LM+G C   +  +  K+F +M      PD+ ++ +LI G  +   +  A  L  QM
Sbjct: 480 TYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQM 539

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
             + LTP+ +TY+ I+ GL     +     +FK M  +G+ P +  Y++LLN L K  +L
Sbjct: 540 SVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHL 599

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICG 602
           D ALKLF  + ++ LEPDII Y  +I G
Sbjct: 600 DEALKLFKSMKEKKLEPDIILYTILIEG 627



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/478 (28%), Positives = 246/478 (51%), Gaps = 13/478 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI      G  + +V +F  M   G    P++V    ++  L     V         
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNGC--KPNVVTYNTIIDSLCKDRLVNDAMDFLSE 258

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G+G       Y  +++GL   G +  A  + +++ Q G  P++VT N I+  L  +  
Sbjct: 259 MVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRL 318

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A+     ++  G  P+VVT++T+++  C   +L +A +L+  M +    PD++ Y+ 
Sbjct: 319 VNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNT 378

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +ID L K   + +  E L   +DRG+  + V +S+++  +  +G +  A Q +  M+   
Sbjct: 379 IIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            +PN +++SIL+ GLCQ+G + EA  +F  +  + +EP++ TY++L++G+C   K+ +  
Sbjct: 439 VMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +++ M+ +G  PD    ++LING      M  A     Q     L PN   +NT+M G 
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C + R  D  +LF  M    + P ++T+++L+ G+   G L  A+ LF  M ++ L PD+
Sbjct: 559 CYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDI 618

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           I Y+ +I G+F G  + V   +F  +  +G+ P    YNV++  L+KE   D A +LF
Sbjct: 619 ILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 254/488 (52%), Gaps = 13/488 (2%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMR--GKGFCVYEF 183
           +D+++  F  M+ M     P +V+  + +  +           LC  M   G    VY  
Sbjct: 74  VDDALASFYRMARMNP--RPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSL 131

Query: 184 --LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             L+N L R   ++ A  +  ++ + G  P+++T   ++  +C  G+I  A  L++ ++ 
Sbjct: 132 NILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVR 191

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G +P+V++++TLIN  C       A  ++  M +    P+++ Y+ +ID L K   + +
Sbjct: 192 SGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVND 251

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             + L   + RG+  D + ++S++     +G +  A + + RM   G  P+V++Y+I+I 
Sbjct: 252 AMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIID 311

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
            L +   + +A     +++ + + P ++TY++++ G C  G+L +   L+  M ++G KP
Sbjct: 312 SLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKP 371

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D V  + +I+ L     + DA+ F  + V   + PN   ++T++ G C L +  +  +LF
Sbjct: 372 DVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLF 431

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M   N+ P+ +T ++L+ G+  +G +S A  +F  M ++G+ P++ TY+A+++G    
Sbjct: 432 KEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLR 491

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             ++    +F++M   G APD+  YN+L+N       +D A  L  Q++ + L P+ +TY
Sbjct: 492 CKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTY 551

Query: 597 NTIICGYC 604
           NTI+ G C
Sbjct: 552 NTIMKGLC 559



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 159/275 (57%), Gaps = 5/275 (1%)

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           AV  + +M   G  P+VI+++ LI G+C +G++  A  L+ +++    EP +++Y++LI+
Sbjct: 147 AVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLIN 206

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           G C SG       ++  M + G KP+ V  + +I+ L     + DA+ F  + V   + P
Sbjct: 207 GLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPP 266

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +   +N+++ G C L +  +  +LF  M     KPDV+T+ ++I  +     ++ A    
Sbjct: 267 DAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFL 326

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M+ +G+ PDV+TY+ I+HGL     ++  + +FK ME+ G  PD+  YN +++ L K+
Sbjct: 327 SEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKD 386

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             ++ A++   ++ DRG+ P+ +TY+TI+ G+C+L
Sbjct: 387 RLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNL 421



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 161/327 (49%), Gaps = 10/327 (3%)

Query: 94  FGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
            G+     RLF+  +   GC      Y+ +I++  +   +++++E  + M D GI  +  
Sbjct: 351 LGQLNEAIRLFK-KMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAV 409

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
               ++    +   + +  +L + M G+        +  L++GL ++G++  A  +   +
Sbjct: 410 TYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETM 469

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
            ++G  PNI T N ++   C+  ++  A  +F++++  G  P++ +++ LIN +C   ++
Sbjct: 470 TEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRM 529

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           +KA  L   M    L P+ + Y+ ++ GL   GRL +  EL       G+   ++ +S +
Sbjct: 530 DKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSIL 589

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           ++     G +  A++ +  M      P++I Y+ILI+G+   G+L  A GLF ++    +
Sbjct: 590 LNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGI 649

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +P   TY+ +I G  K G   + + L+
Sbjct: 650 QPPGRTYNVMIKGLLKEGLSDEAYELF 676



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 58/103 (56%)

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           S+  A+  F++M +    P ++ +   +  + K K  S  +++   M+  GV   +   N
Sbjct: 73  SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           +L+N L +  ++D A+ ++G++   G++PD+IT+ T+I G C+
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCN 175


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 237/429 (55%), Gaps = 5/429 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+N   R+  +  A  +  ++++ G+ P+IVT + +L   C + +I +A +L D ++
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +G KP+ VTF+TLI+      K  +A  L + M++    PDL+ Y  +++GL K G + 
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               LL       ++ DVV++++++D       +  A   +++M   G  P+V +Y+ LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC  GR  +A  L   ++ R++ P+++T+S+LID F K GKL +   LYD MIKR + 
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD    S LING      + +A   F   +     PN+  +NTL+ G C+ KR  + ++L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M    +  + +T+  LI+G+   G    A  +F +M+  G+ PD+ITYS ++ GL K
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +   L +F+ ++++ + PDI  YN+++  + K   ++    LF  L+ +G++P++I 
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537

Query: 596 YNTIICGYC 604
           Y T+I G+C
Sbjct: 538 YTTMISGFC 546



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 260/525 (49%), Gaps = 19/525 (3%)

Query: 87  FDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLS 146
           FD +VI  G+     R+  D        Y+ LI  + R  ++  ++ +   M  +G    
Sbjct: 96  FD-LVISLGERMQNLRISYDLYS-----YNILINCFCRRSQLPLALAVLGKMMKLG--YE 147

Query: 147 PDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHM 200
           PD+V    L++    S  +     L   M   G+      +  L++GL        A  +
Sbjct: 148 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVAL 207

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             Q++QRG  P++VT   ++  LC  G I  A SL   +     + +VV ++T+I+  CK
Sbjct: 208 VDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 267

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
              ++ AF L+N M    + PD+  Y+ LI  L   GR  + + LL   ++R +  +VV 
Sbjct: 268 YKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVT 327

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           FS+++DA+V  G +  A + YD M+     P++ +YS LI G C   RL EA  +F  ++
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD-- 436
            +   P+++TY++LI GFCK+ ++ +G  L+  M +RGL  + V  + LI GL   GD  
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447

Query: 437 -ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
            A + F + V   + P++  ++ L+DG C+  +    + +F  +    ++PD+ T+ ++I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G+   G +     LF  +  +G+ P+VI Y+ +I G  +         +F+ M+ +G  
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           PD   YN L+   +++ +  A+ +L  ++   G   D  T + +I
Sbjct: 568 PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 204/398 (51%), Gaps = 5/398 (1%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
            K+ +   +N ++ +A  LF  ++   P P++V F+ L++A  K  K +    L   M  
Sbjct: 49  EKLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQN 108

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           + +  DL  Y+ILI+   +  +L     +L   +  G + D+V  SS+++ Y     +  
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISD 168

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           AV   D+M+  G+ P+ ++++ LI GL    +  EA  L  Q++ R  +P L+TY ++++
Sbjct: 169 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVN 228

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           G CK G +    SL   M K  ++ D V+ + +I+GL     + DA   F +     + P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRP 288

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           ++F +N+L+   C   R +D  +L   M    I P+V+T + LI     +G L  A  L+
Sbjct: 289 DVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M+KR + PD+ TYS++I+G      +    HMF+LM      P++  YN L+    K 
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             ++  ++LF +++ RGL  + +TYNT+I G      C
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 202/427 (47%), Gaps = 34/427 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++    + G ID ++ +   M    I     +   ++  L     +   + L   M 
Sbjct: 223 YGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKME 282

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++ L   G   +A  +   +I+R   PN+VT + ++      G++ 
Sbjct: 283 TKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLV 342

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L+D ++     P++ T+S+LIN FC   +L++A  ++ LM+  D  P+++ Y+ LI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  KA R++EG EL      RGL  + V +++++      GD   A + + +M++ G  
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++I+YSIL+ GLC+ G+L +A  +F  +   ++EP + TY+ +I+G CK+GK+ DG+ L
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +              CSL + G+                 PN+ I+ T++ G CR     
Sbjct: 523 F--------------CSLSLKGVK----------------PNVIIYTTMISGFCRKGLKE 552

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +   LF  M      PD   +  LIR     G  +++  L  +M   G   D  T S +I
Sbjct: 553 EADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612

Query: 531 HGLFKGK 537
           + L  G+
Sbjct: 613 NMLHDGR 619



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 125/262 (47%), Gaps = 5/262 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  +    ++DE+  +F  M     + +      L+     +  V +  +L R M 
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L+ GL + G  + A  + ++++  G  P+I+T + +L  LC  G++ 
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F+ L     +P++ T++ +I   CK  K+E  + L+  +    + P++IIY+ +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G  +E + L     + G   D   +++++ A +  GD   + +    M + GF+
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFV 602

Query: 351 PNVISYSILIKGLCQQGRLVEA 372
            +  + S++I  L   GRL ++
Sbjct: 603 GDASTISMVINML-HDGRLEKS 623



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/232 (20%), Positives = 92/232 (39%), Gaps = 45/232 (19%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LI  L Q+   D+A  +F KMV              D +      YS L++   + GK++
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMV-------------SDGVPPDIITYSILLDGLCKYGKLE 482

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
           +++ +F Y+      + PD+                               Y  ++ G+ 
Sbjct: 483 KALVVFEYLQKSK--MEPDIY-----------------------------TYNIMIEGMC 511

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           + G +E+ + +   +  +G  PN++    ++   C  G    A +LF  +   G  P+  
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSG 571

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            ++TLI A  ++     + +L   M     V D    S++I+ +   GRL++
Sbjct: 572 CYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEK 622


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 161/578 (27%), Positives = 283/578 (48%), Gaps = 61/578 (10%)

Query: 72  HVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDES 131
            VL Q D  D A   FD    Q G  ++           F C+   L+  +VR  K  E+
Sbjct: 104 RVLQQLDDLDKAVKFFDWCTGQPGYKHS----------KFTCN--CLLSAFVRKKKAQEA 151

Query: 132 VEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLM 185
            ++F      G+  SPD +    L++    +    Q Y+L   M  +G      VY  ++
Sbjct: 152 YDLFKNHR-CGL-CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTII 209

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
            GL   G +++A  +H + +QR   P+++T   ++  LC + +I +AS + + ++  G  
Sbjct: 210 KGLCDNGRVDSAL-VHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCA 268

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNVVT++TLIN FCK   +++A  L+N M+E    PD+  Y+ILIDG  K  R ++G +L
Sbjct: 269 PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 328

Query: 306 LLTALDRGLKLDVVVFSSVMDAYV-----------------------------------G 330
           L   +  G + + + ++++MD+ V                                    
Sbjct: 329 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 388

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
           +G +  A + +  M + G LP++ +Y+I+I G C+  R+ +A  L  ++      P ++T
Sbjct: 389 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 448

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           Y+S++ G CK+ ++ + + +Y+ +   G   D V CS LI+GL     + DA +   +  
Sbjct: 449 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 508

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           R    P++  +  L+ G C+  +   ++  F  M      P VIT++++I  +     + 
Sbjct: 509 RNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVR 568

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
              +L   ML+RG+TPD I Y+++I GL K  +      ++KLM++ G AP +  YNVL+
Sbjct: 569 DGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLV 628

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           + L K   LD A+ L   +   G  PD +TYN++  G+
Sbjct: 629 DKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGF 666



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 241/486 (49%), Gaps = 38/486 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + ++G +DE+V +F  M +     SPD+                         
Sbjct: 274 YNTLINGFCKLGNMDEAVVLFNQMLENSC--SPDVF------------------------ 307

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++G  ++   ++   + +++++ G  PN +T N ++  L  +G+  +A +
Sbjct: 308 -----TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN 362

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L  ++L    KP+  TF+ +I+ FCK  +L+ A++L+ LM +   +PD+  Y+I+I G  
Sbjct: 363 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGAC 422

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           +A R+ +  +LL    + G   DVV ++S++        V  A + Y+ + NGG+  +V+
Sbjct: 423 RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVV 482

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           + S LI GLC+  RL +A  L  ++      P ++ Y+ LI GFCK+ +L    + +  M
Sbjct: 483 TCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 542

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + +G  P  +  S++I+ L     + D        +   + P+  ++ +++DG C+    
Sbjct: 543 LDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSY 602

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  +L+ LM      P V+T+ VL+  +     L  AI L   M   G  PD +TY+++
Sbjct: 603 DEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSV 662

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG- 588
             G +K         +F+ M+  G +P   +Y++LL  L+ E  +D A++++ +  + G 
Sbjct: 663 FDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGA 722

Query: 589 -LEPDI 593
            ++P+I
Sbjct: 723 DVDPEI 728



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 248/524 (47%), Gaps = 21/524 (4%)

Query: 101 FRLFRDSLGDFGCDYSFLIENYV-----RIGKIDESVEIFAYMSDM-GIYLSPDLVQRLM 154
           F L    L +FG    +L+ + V     ++  +D++V+ F + +   G   S      L+
Sbjct: 83  FELASRRLCEFG---GYLVPSVVGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLL 139

Query: 155 SCLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           S  V      + Y L +  R  G C      Y  L+NG  +    + A+ +  ++ +RG 
Sbjct: 140 SAFVRKKKAQEAYDLFKNHRC-GLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGI 198

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           VP+    N I+K LC NG++ +A   +  +      P+V+T++ L++A CK A++  A  
Sbjct: 199 VPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSARISDASL 257

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +   M+E    P+++ Y+ LI+G  K G + E   L    L+     DV  ++ ++D Y 
Sbjct: 258 ILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYC 317

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
                    +    M+  G  PN I+Y+ L+  L + G+ ++A  L   +L R  +PS  
Sbjct: 318 KQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF 377

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           T++ +ID FCK G+L   + L+  M  RG  PD    +++I+G      + DA +   + 
Sbjct: 378 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 437

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
                 P++  +N+++ G C+  +  +  +++ ++       DV+T + LI G+     L
Sbjct: 438 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 497

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  L  +M + G  PDV+ Y+ +IHG  K   +   L  F  M   G  P +  Y+++
Sbjct: 498 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 557

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           ++ L K   +     L   + +RG+ PD I Y ++I G C  +S
Sbjct: 558 IDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 251/487 (51%), Gaps = 9/487 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
           K D+++++F  M       +     RL S +  +        LC+ M  KG         
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            ++N   R   +  AF    ++I+ G+ PN +T + ++  LC+ G++  A  L D ++ +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G KP+++T +TL+N  C   K  +A  L + M+E    P+ + Y  +++ + K+G+    
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            ELL    +R +KLD V +S ++D     G +  A   ++ M   G   N+I+Y+ILI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C  GR  +   L   ++ R++ P+++T+S LID F K GKLR+   L+  MI RG+ PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            +  + LI+G      +  A +     V     PN+  FN L++G C+  R  D ++LF 
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M +  +  D +T+  LI+G    G L+ A  LF +M+ R + P+++TY  ++ GL    
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
                L +F+ +E++ +  DI IYN++++ +     +D A  LF  L  +G++P + TYN
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547

Query: 598 TIICGYC 604
            +I G C
Sbjct: 548 IMIGGLC 554



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 228/461 (49%), Gaps = 40/461 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL  +G +  A  +  ++++ G  P+++T N ++  LC++G+   A  L D +
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219

Query: 240 LLVGPKPNVVTF-----------------------------------STLINAFCKEAKL 264
           +  G +PN VT+                                   S +I+  CK   L
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           + AF L+N M    +  ++I Y+ILI G   AGR  +G +LL   + R +  +VV FS +
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D++V  G +  A + +  M++ G  P+ I+Y+ LI G C++  L +A  +   ++ +  
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
           +P++ T++ LI+G+CK+ ++ DG  L+  M  RG+  D V  + LI G      +  A  
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F + V   + PN+  +  L+DG C    +   +++F  +    ++ D+  + ++I G+ 
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
           +   +  A  LF  +  +G+ P V TY+ +I GL K   +S    +F+ ME +G APD  
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            YN+L+   + + +   ++KL  +L   G   D  T   +I
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 241/465 (51%), Gaps = 13/465 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           +S LI      G++ E++E+   M +MG    PDL+    L++ L  S    +   L   
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMG--HKPDLITINTLVNGLCLSGKEAEAMLLIDK 218

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  ++N + + G    A  + R++ +R    + V  + I+  LC +G 
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + NA +LF+ + + G   N++T++ LI  FC   + +   +L   M++  + P+++ +S+
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID   K G+L+E  EL    + RG+  D + ++S++D +     + +A Q  D M++ G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN+ +++ILI G C+  R+ +   LF ++ +R +    +TY++LI GFC+ GKL    
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M+ R + P+ V   +L++GL  +     AL  F +  +  +  ++ I+N ++ G 
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C   +  D   LF  + +  +KP V T+ ++I G+  +G LS A LLF +M + G  PD 
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            TY+ +I       + +  + + + ++R G + D +   ++++ML
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 205/427 (48%), Gaps = 44/427 (10%)

Query: 189 LRKGVIE----NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           LR G+++    +A  + R +I    +P ++  +++   +    Q     +L   + L G 
Sbjct: 60  LRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGI 119

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
             N+ T S +IN FC+  KL  AF     ++++   P+ I +S LI+GL   GR      
Sbjct: 120 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR------ 173

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
                                        V  A++  DRM+  G  P++I+ + L+ GLC
Sbjct: 174 -----------------------------VSEALELVDRMVEMGHKPDLITINTLVNGLC 204

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
             G+  EA  L  +++    +P+ +TY  +++  CKSG+      L   M +R +K DAV
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             S++I+GL     + +A   F +     +  N+  +N L+ G C   R  D  KL   M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               I P+V+T +VLI     +G L  A  L  +M+ RG+ PD ITY+++I G  K  ++
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                M  LM   G  P+I  +N+L+N   K   +D  L+LF +++ RG+  D +TYNT+
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444

Query: 600 ICGYCSL 606
           I G+C L
Sbjct: 445 IQGFCEL 451



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 211/421 (50%), Gaps = 9/421 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----Y 181
           GK  E++ +   M + G   +      +++ +  S       +L R M  +   +    Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +++GL + G ++NAF++  ++  +G   NI+T N ++   C  G+  + + L   ++ 
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
               PNVVTFS LI++F KE KL +A +L+  M+   + PD I Y+ LIDG  K   L +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
            N+++   + +G   ++  F+ +++ Y     +   ++ + +M   G + + ++Y+ LI+
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C+ G+L  A  LF +++ R++ P+++TY  L+DG C +G+      +++ + K  ++ 
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D  + +++I+G+     + DA   F       + P +  +N ++ G C+    ++   LF
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M      PD  T+ +LIR     G  + ++ L  ++ + G + D  T   +I  L  G
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626

Query: 537 K 537
           +
Sbjct: 627 R 627



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 176/382 (46%), Gaps = 40/382 (10%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  LF  ++   P P V+ FS L +A  K  + +    L   M    +  +L   SI+I
Sbjct: 71  DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +   +  +L     L  +A+ + +KL                               G+ 
Sbjct: 131 NCFCRCRKLC----LAFSAMGKIIKL-------------------------------GYE 155

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN I++S LI GLC +GR+ EA  L  +++    +P L+T ++L++G C SGK  +   L
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            D M++ G +P+AV    ++N     G    A+    +     +  +   ++ ++DG C+
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                +   LF  M M  I  ++IT+ +LI G  + G       L   M+KR + P+V+T
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           +S +I    K   +     + K M   G+APD   Y  L++   KE +LD A ++   + 
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395

Query: 586 DRGLEPDIITYNTIICGYCSLN 607
            +G +P+I T+N +I GYC  N
Sbjct: 396 SKGCDPNIRTFNILINGYCKAN 417



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 151/333 (45%), Gaps = 41/333 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S LI+++V+ GK+ E+ E+   M   GI  +PD +                        
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGI--APDTI------------------------ 369

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++G  ++  ++ A  M   ++ +G  PNI T N ++   C   +I +   
Sbjct: 370 -----TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF  + L G   + VT++TLI  FC+  KL  A +L+  M+   + P+++ Y IL+DGL 
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             G  ++  E+        ++LD+ +++ ++        V  A   +  +   G  P V 
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFS 409
           +Y+I+I GLC++G L EA     ++L R++E     P   TY+ LI      G       
Sbjct: 545 TYNIMIGGLCKKGPLSEA-----ELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 599

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
           L + + + G   DA    ++I+ L    L+  F
Sbjct: 600 LIEELKRCGFSVDASTIKMVIDMLSDGRLKKSF 632



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 2/158 (1%)

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           NL+  + +++  CR ++          +     +P+ IT + LI G+  +G +S A+ L 
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181

Query: 512 FQMLKRGLTPDVITYSAIIHGL-FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
            +M++ G  PD+IT + +++GL   GK     L + K++E  G  P+   Y  +LN++ K
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCK 240

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
                 A++L  ++ +R ++ D + Y+ II G C   S
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 132/408 (32%), Positives = 228/408 (55%), Gaps = 5/408 (1%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++++ G+ P+IVT + +L   C   +I +A +L D ++ +G +P+ +TF+TLI+      
Sbjct: 69  KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 128

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           K  +A  L + M++    P+L+ Y ++++GL K G +     LL       ++ DVV+F+
Sbjct: 129 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 188

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++D+      V  A+  +  M   G  PNV++YS LI  LC  GR  +A  L   ++ +
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
           ++ P+L+T+++LID F K GK  +   L+D+MIKR + PD    + LING      +  A
Sbjct: 249 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 308

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            + F   V     P+L  +NTL+ G C+ KR  D  +LF  M    +  D +T+T LI+G
Sbjct: 309 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 368

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G   +A  +F QM+  G+ PD++TYS ++ GL     +   L +F  M+++ +  D
Sbjct: 369 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 428

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           I IY  ++  + K   +D    LF  L+ +G++P+++TYNT+I G CS
Sbjct: 429 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 476



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 214/410 (52%), Gaps = 5/410 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L++GL        A  +  +++QRG  PN+VT   ++  LC  G I  A +L + +
Sbjct: 116 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 175

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                + +VV F+T+I++ CK   ++ A  L+  M    + P+++ YS LI  L   GR 
Sbjct: 176 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 235

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            + ++LL   +++ +  ++V F++++DA+V  G    A + +D M+     P++ +Y+ L
Sbjct: 236 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 295

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C   RL +A  +F  ++ +   P L TY++LI GFCKS ++ DG  L+  M  RGL
Sbjct: 296 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 355

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             D V  + LI GL  D     A + F Q V   + P++  ++ L+DG C   +    ++
Sbjct: 356 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 415

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  M    IK D+  +T +I G+   G +     LF  +  +G+ P+V+TY+ +I GL 
Sbjct: 416 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 475

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
             + +     + K M+ +G  PD   YN L+   +++ +  A+ +L  ++
Sbjct: 476 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 229/464 (49%), Gaps = 13/464 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           S L+  Y    +I ++V +   M +MG    PD +    L+  L   N   +   L   M
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMVEMG--YRPDTITFTTLIHGLFLHNKASEAVALVDRM 140

Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +G       Y  ++NGL ++G I+ AF++  ++       ++V  N I+  LC    +
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A +LF  +   G +PNVVT+S+LI+  C   +   A QL + M+E  + P+L+ ++ L
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ID   K G+  E  +L    + R +  D+  ++S+++ +     + +A Q ++ M++   
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P++ +Y+ LIKG C+  R+ +   LF ++  R L    +TY++LI G    G   +   
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           ++  M+  G+ PD +  S+L++GL     +  AL  F    +  +  +++I+ T+++G C
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 440

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  +  D   LF  + +  +KP+V+T+  +I G+ S+  L  A  L  +M + G  PD  
Sbjct: 441 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 500

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           TY+ +I    +  + +    + + M       D +   ++ NML
Sbjct: 501 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 544



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 192/427 (44%), Gaps = 34/427 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++    + G ID +  +   M    I     +   ++  L     V     L + M 
Sbjct: 152 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 211

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++ L   G   +A  +   +I++   PN+VT N ++      G+  
Sbjct: 212 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 271

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L D ++     P++ T+++LIN FC   +L+KA Q++  M+  D  PDL  Y+ LI
Sbjct: 272 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 331

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K+ R+++G EL      RGL  D V +++++      GD   A + + +M++ G  
Sbjct: 332 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 391

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++++YSIL+ GLC  G+L +A  +F  +    ++  +  Y+++I+G CK+GK+ DG+ L
Sbjct: 392 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 451

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +              CSL + G+                 PN+  +NT++ G C  +   
Sbjct: 452 F--------------CSLSLKGVK----------------PNVVTYNTMISGLCSKRLLQ 481

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +   L   M      PD  T+  LIR     G  +++  L  +M       D  T   + 
Sbjct: 482 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 541

Query: 531 HGLFKGK 537
           + L  G+
Sbjct: 542 NMLHDGR 548



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 177/360 (49%), Gaps = 7/360 (1%)

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR--LKEGNELLLTALDRGL 314
           ++ K+ KL+ A  L+  M++   +P +  ++ L+  + K  +  L     LL   +  G 
Sbjct: 16  SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY 75

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
           +  +V  SS+++ Y     +  AV   D+M+  G+ P+ I+++ LI GL    +  EA  
Sbjct: 76  EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           L  +++ R  +P+L+TY  +++G CK G +   F+L + M    ++ D V+ + +I+ L 
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               + DAL  F +     + PN+  +++L+   C   R +D  +L   M    I P+++
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T   LI     +G    A  L   M+KR + PD+ TY+++I+G      +     MF+ M
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
                 PD+  YN L+    K   ++   +LF +++ RGL  D +TY T+I G      C
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 258/491 (52%), Gaps = 9/491 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYE 182
           K+++++++F  M       +P    RL S +  +         C+ M   G         
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            ++N   RK  +  AF +  +  + G+ P+ +T + ++   C+ G++  A +L D ++ +
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
             +P++VT STLIN  C + ++ +A  L + M+E    PD + Y  +++ L K+G     
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            +L     +R +K  VV +S V+D+    G    A+  ++ M   G   +V++YS LI G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC  G+  +   +  +++ R + P ++T+S+LID F K GKL +   LY+ MI RG+ PD
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            +  + LI+G      + +A + F   V     P++  ++ L++  C+ KR  D ++LF 
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 438

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            +    + P+ IT+  L+ G    G L++A  LF +M+ RG+ P V+TY  ++ GL    
Sbjct: 439 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 498

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            ++  L +F+ M+++ +   I IYN++++ +     +D A  LF  L+D+G++PD++TYN
Sbjct: 499 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 558

Query: 598 TIICGYCSLNS 608
            +I G C   S
Sbjct: 559 VMIGGLCKKGS 569



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 224/426 (52%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NG   +G +  A  +  ++++    P++VT + ++  LC+ G++  A  L D +
Sbjct: 171 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G +P+ VT+  ++N  CK      A  L+  M E ++   ++ YSI+ID L K G  
Sbjct: 231 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 290

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   L      +G+K DVV +SS++      G      +    M+    +P+V+++S L
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I    ++G+L+EA  L+ +++ R + P  +TY+SLIDGFCK   L +   ++D M+ +G 
Sbjct: 351 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 410

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD V  S+LIN       + D +R F +     LIPN   +NTL+ G C+  +     +
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    + P V+T+ +L+ G+   G L+ A+ +F +M K  +T  +  Y+ IIHG+ 
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 530

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +     +F  +   GV PD+  YNV++  L K+ +L  A  LF ++ + G  PD  
Sbjct: 531 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 590

Query: 595 TYNTII 600
           TYN +I
Sbjct: 591 TYNILI 596



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 247/467 (52%), Gaps = 17/467 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           +S L+  +   G++ E+V +   M +M     PDLV    L++ L     V +   L   
Sbjct: 172 FSTLVNGFCLEGRVSEAVALVDRMVEM--KQRPDLVTVSTLINGLCLKGRVSEALVLIDR 229

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   GF      Y  ++N L + G    A  + R++ +R    ++V  + ++  LC +G 
Sbjct: 230 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 289

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             +A SLF+ + + G K +VVT+S+LI   C + K +   ++   M+  +++PD++ +S 
Sbjct: 290 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 349

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID   K G+L E  EL    + RG+  D + ++S++D +     +  A Q +D M++ G
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 409

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++++YSILI   C+  R+ +   LF ++  + L P+ +TY++L+ GFC+SGKL    
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF--FQSVRMTLIPNLFIFNTLMD 461
            L+  M+ RG+ P  V   +L++GL     +  AL  F   Q  RMTL   + I+N ++ 
Sbjct: 470 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL--GIGIYNIIIH 527

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C   +  D   LF  +    +KPDV+T+ V+I G+  +GSLS A +LF +M + G TP
Sbjct: 528 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 587

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           D  TY+ +I     G  +   + + + M+  G + D +   ++++ML
Sbjct: 588 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 258/491 (52%), Gaps = 9/491 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYE 182
           K+++++++F  M       +P    RL S +  +         C+ M   G         
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            ++N   RK  +  AF +  +  + G+ P+ +T + ++   C+ G++  A +L D ++ +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
             +P++VT STLIN  C + ++ +A  L + M+E    PD + Y  +++ L K+G     
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            +L     +R +K  VV +S V+D+    G    A+  ++ M   G   +V++YS LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC  G+  +   +  +++ R + P ++T+S+LID F K GKL +   LY+ MI RG+ PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            +  + LI+G      + +A + F   V     P++  ++ L++  C+ KR  D ++LF 
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            +    + P+ IT+  L+ G    G L++A  LF +M+ RG+ P V+TY  ++ GL    
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            ++  L +F+ M+++ +   I IYN++++ +     +D A  LF  L+D+G++PD++TYN
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529

Query: 598 TIICGYCSLNS 608
            +I G C   S
Sbjct: 530 VMIGGLCKKGS 540



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 224/426 (52%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NG   +G +  A  +  ++++    P++VT + ++  LC+ G++  A  L D +
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G +P+ VT+  ++N  CK      A  L+  M E ++   ++ YSI+ID L K G  
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   L      +G+K DVV +SS++      G      +    M+    +P+V+++S L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I    ++G+L+EA  L+ +++ R + P  +TY+SLIDGFCK   L +   ++D M+ +G 
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD V  S+LIN       + D +R F +     LIPN   +NTL+ G C+  +     +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    + P V+T+ +L+ G+   G L+ A+ +F +M K  +T  +  Y+ IIHG+ 
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +     +F  +   GV PD+  YNV++  L K+ +L  A  LF ++ + G  PD  
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 561

Query: 595 TYNTII 600
           TYN +I
Sbjct: 562 TYNILI 567



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 247/467 (52%), Gaps = 17/467 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           +S L+  +   G++ E+V +   M +M     PDLV    L++ L     V +   L   
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEM--KQRPDLVTVSTLINGLCLKGRVSEALVLIDR 200

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   GF      Y  ++N L + G    A  + R++ +R    ++V  + ++  LC +G 
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             +A SLF+ + + G K +VVT+S+LI   C + K +   ++   M+  +++PD++ +S 
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID   K G+L E  EL    + RG+  D + ++S++D +     +  A Q +D M++ G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++++YSILI   C+  R+ +   LF ++  + L P+ +TY++L+ GFC+SGKL    
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF--FQSVRMTLIPNLFIFNTLMD 461
            L+  M+ RG+ P  V   +L++GL     +  AL  F   Q  RMTL   + I+N ++ 
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL--GIGIYNIIIH 498

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C   +  D   LF  +    +KPDV+T+ V+I G+  +GSLS A +LF +M + G TP
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           D  TY+ +I     G  +   + + + M+  G + D +   ++++ML
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 250/493 (50%), Gaps = 13/493 (2%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----V 180
           K D++V++F  M+       P L+   RL S +  +        LC+ M  KG       
Sbjct: 52  KEDDAVDLFQEMTRS--RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
              ++N   R   +  AF    ++I+ G+ P+ VT + ++  LC+ G++  A  L D ++
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +G KP ++T + L+N  C   K+  A  L + M+E    P+ + Y  ++  + K+G+  
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              ELL    +R +KLD V +S ++D     G +  A   ++ M   GF  ++I Y+ LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
           +G C  GR  +   L   ++ R++ P ++ +S+LID F K GKLR+   L+  MI+RG+ 
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V  + LI+G      +  A       V     PN+  FN L++G C+     D ++L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M +  +  D +T+  LI+G    G L  A  LF +M+ R + PD+++Y  ++ GL  
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
                  L +F+ +E++ +  DI IYN++++ +     +D A  LF  L  +G++PD+ T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529

Query: 596 YNTIICGYCSLNS 608
           YN +I G C   S
Sbjct: 530 YNIMIGGLCKKGS 542



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 222/426 (52%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL  +G +  A  +  ++++ G  P ++T N ++  LC+NG++ +A  L D +
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G +PN VT+  ++   CK  +   A +L   M E  +  D + YSI+IDGL K G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L      +G K D++++++++  +   G      +    M+     P+V+++S L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I    ++G+L EA  L  +++ R + P  +TY+SLIDGFCK  +L     + D M+ +G 
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383

Query: 420 KPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+    ++LING     L+ D L  F +     ++ +   +NTL+ G C L +     +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    ++PD++++ +L+ G+   G    A+ +F ++ K  +  D+  Y+ IIHG+ 
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +     +F  +   GV PD+  YN+++  L K+ +L  A  LF ++ + G  P+  
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563

Query: 595 TYNTII 600
           TYN +I
Sbjct: 564 TYNILI 569



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 260/538 (48%), Gaps = 40/538 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S LI      G++ E++E+   M +MG   +   +  L++ L  +  V     L   M 
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF      Y  ++  + + G    A  + R++ +R    + V  + I+  LC +G + 
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA +LF+ + + G K +++ ++TLI  FC   + +   +L   M++  + PD++ +S LI
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D   K G+L+E  EL    + RG+  D V ++S++D +     + +A    D M++ G  
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN+ +++ILI G C+   + +   LF ++ +R +    +TY++LI GFC+ GKL     L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M+ R ++PD V   +L++GL  +     AL  F +  +  +  ++ I+N ++ G C 
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +  D   LF  + +  +KPDV T+ ++I G+  +GSLS A LLF +M + G +P+  T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564

Query: 526 YSAIIHGLF----------------------KGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           Y+ +I                              +   L     M + G  PD+  +  
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTT 624

Query: 564 LLNMLIKECNLDA--ALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           LL     E N     A  LF  +   G +P+++TYNT+I G       L++G   SQ+
Sbjct: 625 LLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKG-------LLNGNMISQV 675



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 220/471 (46%), Gaps = 33/471 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I+   + G +D +  +F  M   G      +   L+     +       KL R M 
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        +  L++  +++G +  A  +H+++IQRG  P+ VT   ++   C   Q+ 
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ + D+++  G  PN+ TF+ LIN +CK   ++   +L+  M    +V D + Y+ LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G+L+   EL    + R ++ D+V +  ++D     G+  +A++ ++++      
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            ++  Y+I+I G+C   ++ +A  LF  + ++ ++P + TY+ +I G CK G L +   L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDA-----------------------LRFFFQSVRM 447
           +  M + G  P+    ++LI   +G+                        LRF   ++  
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR 609

Query: 448 TLI----PNLFIFNTLMDGCCRLKRAT--DTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            L     P++F F TL+   C  + A+  D   LF  M     KP+V+T+  +I+G+ + 
Sbjct: 610 MLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNG 669

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
             +S    +  QM +RG  P+ +T S  I GL K       + + + ME +
Sbjct: 670 NMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMEND 720


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 265/518 (51%), Gaps = 21/518 (4%)

Query: 115 YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           YSF  L++ +    K+  ++  F  ++ +G + +      L+  L   + + +   L   
Sbjct: 117 YSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQ 176

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           M       +  LMNGL R+G +  A  +  ++++ G  PN +T   I+  +C  G   +A
Sbjct: 177 MCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSA 236

Query: 233 SSLFDVLLLVGPK-PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
            +L   +  V    PNVV ++T+I+   K+ +   A  L+  M E ++ PD++ Y+ +I+
Sbjct: 237 LNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMIN 296

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G   +GR  +  +LL   L+R +  DVV FS++++A+V  G    A + YD ML    +P
Sbjct: 297 GFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIP 356

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           + ++YS +I G C+Q RL  A  +F     +   P ++T+++LI G+C++ ++ DG  L 
Sbjct: 357 STVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 416

Query: 412 DNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M + GL  + +  + LI+G   +GD   A     + +   + PN+   NTL+DG C  
Sbjct: 417 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDN 476

Query: 467 KRATDTVKLFMLMGMYN-----------IKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
            +  D +++F  M               ++PDV T+ +LI G+ ++G    A  L+ +M 
Sbjct: 477 GKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMP 536

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            RG+ PD ITYS++I GL K   +     MF  M     +PD+  +N L+    K   +D
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVD 596

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
             L+LF ++  RG+  D ITY T+I G+  +++  IDG
Sbjct: 597 DGLELFCEMGQRGIVADAITYITLIYGFRKVDN--IDG 632



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 257/524 (49%), Gaps = 28/524 (5%)

Query: 105 RDSLGD---FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           RD   D   FG +   L   +  I  +D+++++F YM       S     +LM  +V   
Sbjct: 36  RDGESDEAGFGGESLKLQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMG 95

Query: 162 SVGQYYKLCRAMRG-KGFC-VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
                  L + M   +  C  Y F  LM        +  A     ++ + GF P +VT N
Sbjct: 96  RPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFN 155

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            +L  LC+  +I  A  LF  +     KPNVVTF+TL+N  C+E ++ +A  L + M+E 
Sbjct: 156 TLLHGLCVEDRISEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLED 211

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVVVFSSVMDAYVGIGDVGR 336
            L P+ I Y  ++DG+ K G       LL    +   +  +VV++++++D     G    
Sbjct: 212 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSD 271

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A   +  M      P++++Y+ +I G C  GR  +A  L  ++L R++ P ++T+S+LI+
Sbjct: 272 AHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALIN 331

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
            F K GK  +   LYD M+ R + P  V  S +I+G      +  A   F+ +      P
Sbjct: 332 AFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSP 391

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           ++  FNTL+ G CR KR  D +KL   M    +  + IT+T LI G    G L++A  L 
Sbjct: 392 DIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 451

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER-----------NGVAPDIAI 560
            +M+  G+ P+V+T + ++ GL     +   L MFK M++           NGV PD+  
Sbjct: 452 QEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQT 511

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           YN+L+  LI E     A +L+ ++  RG+ PD ITY+++I G C
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 219/422 (51%), Gaps = 18/422 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y  +++GL + G   +A ++  ++ ++   P+IVT N ++   CI+G+  +A  L   +
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L     P+VVTFS LINAF KE K  +A +LY+ M+   ++P  + YS +IDG  K  RL
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRL 374

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                +      +G   D++ F++++  Y     V   ++    M   G + N I+Y+ L
Sbjct: 375 DAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 434

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK--- 416
           I G CQ G L  A  L  +++   + P+++T ++L+DG C +GKL+D   ++  M K   
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 417 --------RGLKPDA-----VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
                    G++PD      ++C L+  G   +A   + +     ++P+   +++++DG 
Sbjct: 495 DIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  R  +  ++F  MG  +  PDV+T   LI G    G +   + LF +M +RG+  D 
Sbjct: 555 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADA 614

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD-IAIYNVLLNMLIKECNLDAALKLFG 582
           ITY  +I+G  K  NI   L +F+ M  +GV PD I I N+L  +  KE  L+ A+ +  
Sbjct: 615 ITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKE-ELERAVAMLE 673

Query: 583 QL 584
            L
Sbjct: 674 DL 675



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 186/384 (48%), Gaps = 10/384 (2%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  LF  ++   P P+V+ F  L+    +  + +    L+  M  + +  +   ++I
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+       +L             G    VV F++++        +  A+  + +M    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK-- 179

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV++++ L+ GLC++GR+VEA  L  ++L   L+P+ +TY +++DG CK G      
Sbjct: 180 --PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 409 SLYDNMIK-RGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           +L   M +   + P+ V+ + +I+GL       DA   F +     + P++  +N +++G
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C   R +D  +L   M    I PDV+T + LI     +G    A  L+ +ML R + P 
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +TYS++I G  K   +    HMF L    G +PDI  +N L+    +   +D  +KL  
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417

Query: 583 QLTDRGLEPDIITYNTIICGYCSL 606
           ++T+ GL  + ITY T+I G+C +
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQV 441


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 231/429 (53%), Gaps = 6/429 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  ++    ++G + + + +  Q++  G  P+ +  N ++      G++  A+ L++ +
Sbjct: 10  TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           + VG +P++ T+++L+NAFCKE K+++A +L+  M E    PD++ YS +I GL K G++
Sbjct: 70  VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129

Query: 300 KEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            E  E+L   + +RG   + V ++++++      ++ RA +  + M + G++P+ I+Y+ 
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT 189

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           ++ GLC+ G++ EA   F  +  R   P ++ Y+ L+D   K GK  +   L+ ++I +G
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             PD V  + ++ GL     M +A   F + V     PN   ++ ++ G CR K+  D  
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAH 309

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           K+   M      PDV+T+ +L+ G+     +  A  LF  M+  G  PD+++YS +++GL
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 369

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K   +     +F  M    + PD+  +N+L++ L K   LD A  L  Q+T  G  PD 
Sbjct: 370 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDY 429

Query: 594 ITYNTIICG 602
           + YNT++ G
Sbjct: 430 VAYNTLMNG 438



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 201/368 (54%), Gaps = 6/368 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PN  TF  ++ +FCK+ KL   ++L+  M++  + PD I Y+ILIDG  K GR+ E N L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
               +  GL+  +  ++S+++A+     +  A++ +  M   GF P+V++YS +I GLC+
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 366 QGRLVEACG-LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
            G++ EA   LF +++ R    + + Y++LI+G CK   +   + L + M  +G  PD +
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 425 VCSLLINGL--MG---DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + +++GL  MG   +A +FF         P++  +N L+D   +  +  + +KLF  +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                 PD +T+  ++ G+A + ++  A  +F +M+  G  P+  TYS ++ G  + K +
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                + + M + G  PD+  YN+LL+ L K   +D A +LF  + D G  PDI++Y+ +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 600 ICGYCSLN 607
           + G C  N
Sbjct: 366 LNGLCKTN 373



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 231/474 (48%), Gaps = 43/474 (9%)

Query: 95  GKTYNFFRLFRDSLGDF----GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           GK  + ++LF   L +     G +Y+ LI+ Y + G++DE+  ++  M  +G  L P + 
Sbjct: 22  GKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG--LEPSIY 79

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
                                         Y  L+N   ++  ++ A  + + + ++GF 
Sbjct: 80  -----------------------------TYNSLLNAFCKETKMKEAMELFKTMAEKGFE 110

Query: 211 PNIVTCNKILKRLCINGQIGNA-SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           P++VT + I+  LC  G++  A   LF  ++  G   N V ++ LIN  CK+  +E+A++
Sbjct: 111 PDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYK 170

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L   M     VPD I Y+ ++ GL + G++ E  +   +   RG   DVV ++ ++DA  
Sbjct: 171 LLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY 230

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G    A++ +  ++  G++P+ ++Y+ ++ GL ++  + EA  +F +++     P+  
Sbjct: 231 KEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQS 444
           TYS ++ G C++ K+ D   + + M K G  PD V  ++L++G     L+  A   F   
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           V     P++  ++ +++G C+  +  D   LF  M    + PDV+T  +L+ G+   G L
Sbjct: 351 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPD 557
             A  L  QM   G  PD + Y+ +++GL K G++I     + + M+  G   D
Sbjct: 411 DEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQAD-RLTQAMKEKGFLSD 463



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 138/263 (52%), Gaps = 41/263 (15%)

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
           +R   P+  T+  ++  FCK GKLRDG+ L++ M+  G+ PD +  ++LI+G      + 
Sbjct: 1   MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +A R + + V + L P+++ +N+L++  C+  +  + ++LF  M     +PDV+T++ +I
Sbjct: 61  EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120

Query: 496 RGIASQGSLSSAI-LLFFQMLKRGLTPDVITYSAIIHGLFKGKNI--------------- 539
            G+   G ++ A+ +LF +M++RG + + + Y+A+I+GL K +NI               
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 180

Query: 540 --------------------SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
                               S     F  M   G +PD+  YN LL+ L KE   D A+K
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240

Query: 580 LFGQLTDRGLEPDIITYNTIICG 602
           LF  +  +G  PD +TYN+I+ G
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLG 263



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 67/124 (54%)

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
           M    P+  T  V+++    QG L     LF QML  G++PD I Y+ +I G  K   + 
Sbjct: 1   MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               +++ M   G+ P I  YN LLN   KE  +  A++LF  + ++G EPD++TY+TII
Sbjct: 61  EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120

Query: 601 CGYC 604
            G C
Sbjct: 121 SGLC 124


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 262/540 (48%), Gaps = 52/540 (9%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRG 175
           +I+   +  K+D+++ +F  M D  IY  PD+V    L+  L     V + Y L    R 
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIY--PDVVTYGALIDGLGKQRRVKEAYDLFEEARA 58

Query: 176 KG----FCVYEFLMNGLLRKGVIENAFHMHRQV-IQRGFVPNIVTCNKILKRLCINGQIG 230
           KG       Y  +++GL + G IENA  ++  + I  GF P +VT + ++  LC + ++ 
Sbjct: 59  KGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVD 118

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINA--------------------------------- 257
               L + +   G  PN VT++TL+NA                                 
Sbjct: 119 KGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLII 178

Query: 258 --FCKEAKLEKAFQLYN--LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
              CKE ++E AF++ +   M+E  L PD+I ++ ++DGL K  R+ + + +   AL+RG
Sbjct: 179 KGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            + +VV +S+++D    +  +  A+Q   +M+  G   N ++YS ++ GL + GR+ +A 
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 298

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +  Q+      P  +TY++LIDGF K  +LR+   L   M++ G  P  V  + L +GL
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN-IKPD 487
                  +A+            PN   +++++DG C+  R T+ +  F  M     + P 
Sbjct: 359 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 418

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           VI ++ LI G+   G +  A     +M++ G  PDV+T+S +I+GL     I  GL +F+
Sbjct: 419 VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFR 478

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            M   G  PD+  Y  L++ L +   +D A  LF Q+   GL PD  T  T+I G   +N
Sbjct: 479 GMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVN 538



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 251/514 (48%), Gaps = 27/514 (5%)

Query: 37  AILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQ 93
           A++  L K      A   F+        P +     +I  L +    + A  ++D M I 
Sbjct: 35  ALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIH 94

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
           FG        FR ++      YS LI+   R  ++D+  ++   M+  G   +      L
Sbjct: 95  FG--------FRPTV----VTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTL 142

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQV--IQR 207
           ++ L+      + + L   M   G       +  ++ GL ++G IE AF +  ++  I+ 
Sbjct: 143 VNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIES 202

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P+++T N +L  LC   +I +A ++F   L  G +PNVVT+STLI+   K AK+++A
Sbjct: 203 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 262

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            QL   M+E+    + + YS ++DGL K GR+++   +L    D G   D V +++++D 
Sbjct: 263 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 322

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +     +  AV     ML  GF P+V++Y+ L  GLC+ GR  EA  +   +  R   P+
Sbjct: 323 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 382

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG-LKPDAVVCSLLINGL-----MGDALRFF 441
            +TYSS++DG CK+G++ +    ++ M +   + P  +  S LI+GL     + +A  F 
Sbjct: 383 AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFL 442

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + +R   IP++  F+ L++G C   R    ++LF  M      PD++T+  L+  +   
Sbjct: 443 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRA 502

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
             +  A  LF QM   GL+PD  T   +IHGL +
Sbjct: 503 SRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLE 536



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 153/304 (50%), Gaps = 5/304 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+   ++ K+DE++++ A M ++G   +      ++  L+    +     + R MR
Sbjct: 246 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++G  ++  +  A  + R++++ GF P++VT   +   LC +G+  
Sbjct: 306 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 365

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV-PDLIIYSIL 289
            A  + D +   G  PN +T+S++++  CK  ++ +A   +  M   ++V P +I YS L
Sbjct: 366 EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSAL 425

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDGL KAG++ E  E L   +  G   DVV FS +++     G +   ++ +  M   G 
Sbjct: 426 IDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGC 485

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           +P++++Y+ L+  LC+  R+ EA  LF Q+    L P   T  ++I G  +  +  D   
Sbjct: 486 VPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKR 545

Query: 410 LYDN 413
           + D 
Sbjct: 546 IQDE 549



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 169/381 (44%), Gaps = 28/381 (7%)

Query: 2   LLKFKNLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNC 61
           L K   +   +R +++ +  ES      + FN   ++L  L K      A   FK     
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFN---SVLDGLCKEQRILDAHNVFKRALER 237

Query: 62  VSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFL 118
              PN+   + LI  L +    D A  +  KMV + G   N               YS +
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV-ELGCRANTVT------------YSTV 284

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGK 176
           ++  +++G+++++V +   M D G    PD V    L+        + +   L R M   
Sbjct: 285 VDGLLKVGRMEDAVVVLRQMRDAGCL--PDAVTYNTLIDGFFKRQRLREAVGLLREMLEA 342

Query: 177 GF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           GF      Y  L +GL R G  + A  +   +  RG  PN +T + I+  LC  G++  A
Sbjct: 343 GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA 402

Query: 233 SSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
              F+ +       P+V+ +S LI+  CK  K+++A++    M+    +PD++ +SILI+
Sbjct: 403 LGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILIN 462

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL  AGR+  G EL     +RG   D+V +++++D       V  A   + +M + G  P
Sbjct: 463 GLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSP 522

Query: 352 NVISYSILIKGLCQQGRLVEA 372
           +  +   +I GL +  R  +A
Sbjct: 523 DRSTRRTMIHGLLEVNRDEDA 543


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 250/485 (51%), Gaps = 9/485 (1%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR--GKGFCVYEF-- 183
           ID+++  F  M  M    S     + +  +           LC  M   G    VY    
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N L R   ++ A  +  ++ + G  P+ +T N ++  LC  G+I  A  LF+ ++  G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNV++++T+IN  CK      A +++  M +    P+++ Y+ +ID L K   + E  
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           E L   +DRG+  DVV +++++  +  +G +  A + +  M+    +P+ ++++IL+ GL
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G + EA  +   +  +  EP+  TY++L+DG+C   ++ +   +   MI +G  P+ 
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              ++LING      M +A R   +     L P+   ++TLM G C++ R  + + LF  
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    + PD++ +++L+ G    G L  A+ L  +M +R + P++I Y+ +I G+F    
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           + V   +F  +  +G+ PDI  YNV++  L+KE   D A + F ++ D G  PD  +YN 
Sbjct: 497 LEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNV 556

Query: 599 IICGY 603
           II G+
Sbjct: 557 IIQGF 561



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/592 (25%), Positives = 270/592 (45%), Gaps = 62/592 (10%)

Query: 14  SINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHV 73
           S+ + +C       +D+  + A      +++ N     ++F K+  +       +  + +
Sbjct: 59  SLPQKHCGFGSNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSL 118

Query: 74  LLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVE 133
             Q D+              FG T+N + L            + LI    R+  +D +V 
Sbjct: 119 CNQMDL--------------FGVTHNVYSL------------NVLINCLCRLSHVDFAVS 152

Query: 134 IFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGV 193
           +   M  +GI   PD +                              +  L+NGL  +G 
Sbjct: 153 VMGKMFKLGI--QPDAI-----------------------------TFNTLINGLCNEGK 181

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           I+ A  +  +++  G  PN+++ N ++  LC NG    A  +F  +     KPNVVT++T
Sbjct: 182 IKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNT 241

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +I++ CK+  + +A +  + M++  + PD++ Y+ ++ G    G+L E   L    + R 
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  D V F+ ++D     G V  A    + M   G  PN  +Y+ L+ G C   ++ EA 
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAI 361

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            + G ++ +   P+L +Y+ LI+G+CKS ++ +   L   M ++ L PD V  S L+ GL
Sbjct: 362 KVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421

Query: 434 MG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                  +AL  F +     L+P+L  ++ L+DG C+     + +KL   M    IKP++
Sbjct: 422 CQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNI 481

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           I +T+LIRG+   G L  A  LF ++   G+ PD+ TY+ +I GL K          F+ 
Sbjct: 482 ILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRK 541

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           ME +G  PD   YNV++   ++  +   A++L  ++  +    D  T+  ++
Sbjct: 542 MEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 190/381 (49%), Gaps = 5/381 (1%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +A + F  ++ + P+P+VV F   + +  K+ +   A  L N M    +  ++   ++
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+ L +   +     ++      G++ D + F+++++     G +  AV  ++ M+  G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNVISY+ +I GLC+ G  + A  +F ++   R +P+++TY+++ID  CK   + +  
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
                M+ RG+ PD V  + +++G      + +A R F + V   ++P+   FN L+DG 
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+    ++   +   M     +P+  T+  L+ G      +  AI +   M+ +G  P++
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            +Y+ +I+G  K K ++    +   M    + PD   Y+ L+  L +      AL LF +
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           +   GL PD++ Y+ ++ G+C
Sbjct: 437 MCSSGLLPDLMAYSILLDGFC 457



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 95/155 (61%)

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N++  N L++  CRL      V +   M    I+PD IT   LI G+ ++G +  A+ LF
Sbjct: 130 NVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLF 189

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M+  G  P+VI+Y+ +I+GL K  N  + + +F+ ME+N   P++  YN +++ L K+
Sbjct: 190 NEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKD 249

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             ++ A++   ++ DRG+ PD++TYNTI+ G+CSL
Sbjct: 250 RLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSL 284


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 250/493 (50%), Gaps = 13/493 (2%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFC----V 180
           K D++V++F  M+       P L+   RL S +  +        LC+ M  KG       
Sbjct: 52  KEDDAVDLFQEMTRS--RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
              ++N   R   +  AF    ++I+ G+ P+ VT + ++  LC+ G++  A  L D ++
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +G KP ++T + L+N  C   K+  A  L + M+E    P+ + Y  ++  + K+G+  
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              ELL    +R +KLD V +S ++D     G +  A   ++ M   GF  ++I Y+ LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
           +G C  GR  +   L   ++ R++ P ++ +S+LID F K GKLR+   L+  MI+RG+ 
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V  + LI+G      +  A       V     PN+  FN L++G C+     D ++L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M +  +  D +T+  LI+G    G L  A  LF +M+ R + PD+++Y  ++ GL  
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
                  L +F+ +E++ +  DI IYN++++ +     +D A  LF  L  +G++PD+ T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529

Query: 596 YNTIICGYCSLNS 608
           YN +I G C   S
Sbjct: 530 YNIMIGGLCKKGS 542



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 222/426 (52%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL  +G +  A  +  ++++ G  P ++T N ++  LC+NG++ +A  L D +
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G +PN VT+  ++   CK  +   A +L   M E  +  D + YSI+IDGL K G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L      +G K D++++++++  +   G      +    M+     P+V+++S L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I    ++G+L EA  L  +++ R + P  +TY+SLIDGFCK  +L     + D M+ +G 
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383

Query: 420 KPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+    ++LING     L+ D L  F +     ++ +   +NTL+ G C L +     +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    ++PD++++ +L+ G+   G    A+ +F ++ K  +  D+  Y+ IIHG+ 
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +     +F  +   GV PD+  YN+++  L K+ +L  A  LF ++ + G  P+  
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563

Query: 595 TYNTII 600
           TYN +I
Sbjct: 564 TYNILI 569



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 219/422 (51%), Gaps = 5/422 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NGL   G + +A  +  ++++ GF PN VT   +LK +C +GQ   A  L   +    
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            K + V +S +I+  CK+  L+ AF L+N M       D+IIY+ LI G   AGR  +G 
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +LL   + R +  DVV FS+++D +V  G +  A + +  M+  G  P+ ++Y+ LI G 
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++ +L +A  +   ++ +   P++ T++ LI+G+CK+  + DG  L+  M  RG+  D 
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  + LI G      +  A   F + V   + P++  +  L+DG C        +++F  
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +    ++ D+  + ++I G+ +   +  A  LF  +  +G+ PDV TY+ +I GL K  +
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +S    +F+ ME +G +P+   YN+L+   + E +   + KL  ++   G   D  T   
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602

Query: 599 II 600
           ++
Sbjct: 603 VV 604



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 240/463 (51%), Gaps = 9/463 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S LI      G++ E++E+   M +MG   +   +  L++ L  +  V     L   M 
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF      Y  ++  + + G    A  + R++ +R    + V  + I+  LC +G + 
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA +LF+ + + G K +++ ++TLI  FC   + +   +L   M++  + PD++ +S LI
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D   K G+L+E  EL    + RG+  D V ++S++D +     + +A    D M++ G  
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN+ +++ILI G C+   + +   LF ++ +R +    +TY++LI GFC+ GKL     L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M+ R ++PD V   +L++GL  +     AL  F +  +  +  ++ I+N ++ G C 
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +  D   LF  + +  +KPDV T+ ++I G+  +GSLS A LLF +M + G +P+  T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           Y+ +I       + +    + + ++R G + D +   ++++ML
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 167/358 (46%), Gaps = 12/358 (3%)

Query: 95  GKTYNFFRLFRD-SLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           G   N F LF +  +  F  D   Y+ LI  +   G+ D+  ++   M    I  +PD+V
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI--TPDVV 318

Query: 151 --QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQV 204
               L+ C V    + +  +L + M  +G       Y  L++G  ++  ++ A HM   +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           + +G  PNI T N ++   C    I +   LF  + L G   + VT++TLI  FC+  KL
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E A +L+  M+   + PD++ Y IL+DGL   G  ++  E+        ++LD+ +++ +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +        V  A   +  +   G  P+V +Y+I+I GLC++G L EA  LF ++     
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            P+  TY+ LI      G       L + + + G   DA    ++++ L    L+  F
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 261/511 (51%), Gaps = 18/511 (3%)

Query: 112 GCDYSFLIENYVRIG--KIDESVEIFAYMSDMGIY--LSPDLVQ--RLMSCLVDSNSVGQ 165
           GC  + +  N +  G  K D S E F    DM +   L PD +    L+  L  +   GQ
Sbjct: 460 GCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQ 519

Query: 166 YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
              L  AM       +   +NGL + G +  A  ++ ++++   VP+ VT N ++   C 
Sbjct: 520 AEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACK 579

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            G    AS+LF+ ++    +P+V+TF  LI+  CK  ++E A  + +LM  + + P+++ 
Sbjct: 580 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 639

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ L+ GL K+GR++E  + L   +  G   D + + S++ A         A+Q    + 
Sbjct: 640 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 699

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           + G+ P+ ++Y+IL+ GL + G+  +A  +  +++ +   P ++TY++LID  CK+G L 
Sbjct: 700 SFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLE 759

Query: 406 DGFSLYDNM---IKRGLKPDAVVCSLLINGLMG----DALRFFFQSV---RMTLIPNLFI 455
           +   L+ +M   + R   P+ V  S+LINGL      D  R   Q +      ++PN+  
Sbjct: 760 EARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIIT 819

Query: 456 FNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
           +N+ +DG C+     +  +L   +  G   + PD +T + LI G+   G    A  +F  
Sbjct: 820 YNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDD 879

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M+  G  P+V+TY+ +++GL K   +     M + M   GV PD+  Y+VL++   K  +
Sbjct: 880 MIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +D AL+L   +  RG  P+++T+N+II G C
Sbjct: 940 VDEALELLHGMASRGCTPNVVTFNSIIDGLC 970



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 237/498 (47%), Gaps = 41/498 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI    ++G+IDE+ E+   M+     + P+++                        
Sbjct: 289 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII------------------------ 324

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF--VPNIVTCNKILKRLCINGQIGNA 232
                 Y   ++GL ++ +   A  + R +        P+ VT + ++  LC  GQI  A
Sbjct: 325 -----TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEA 379

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
            S+FD ++  G  PNV+T++ L+N  CK  K+E+A  +   M++  + PD+I YS+L+D 
Sbjct: 380 CSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDA 439

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM-LNGGFLP 351
             KA R+ E  ELL     RG   +VV F+S++D        G A Q +D M L  G +P
Sbjct: 440 FCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVP 499

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           + I+Y  LI GL + GR  +A  L   +     +P    ++  I+G  K G +     +Y
Sbjct: 500 DKITYCTLIDGLFRTGRAGQAEALLDAM----PDPDTYAFNCCINGLSKLGDVSRALQVY 555

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + M++  L PD V  ++LI G         A   F + V   L P++  F  L+DG C+ 
Sbjct: 556 NRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKA 615

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +      +  LMG   + P+V+T+  L+ G+   G +  A     +M+  G  PD ITY
Sbjct: 616 GQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITY 675

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            ++++ L +       L +   ++  G  PD   YN+L++ L K    + A+ +  ++  
Sbjct: 676 GSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVG 735

Query: 587 RGLEPDIITYNTIICGYC 604
           +G  PD++TYNT+I   C
Sbjct: 736 KGHHPDVVTYNTLIDSLC 753



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 166/611 (27%), Positives = 280/611 (45%), Gaps = 84/611 (13%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG 95
           N  L  L+K+ +P  AI  F+        PN     H    + +R       D       
Sbjct: 115 NKYLNLLVKSGSPAKAIDLFRSRLPPRCRPN-----HFTYSTLLRATYKAGGD-----VE 164

Query: 96  KTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIF-AYMSDMGIYLSPDLVQRLM 154
           +T  FFR  R S      DY+ ++++  R G+   ++EIF   M+  G+  +P +V    
Sbjct: 165 RTLGFFRRIRSSSRSVA-DYNIVLQSLCRAGETARALEIFRGEMARDGV--APTIV---- 217

Query: 155 SCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
                                     Y  ++NGL +   +     +  ++++RG  P++V
Sbjct: 218 -------------------------TYNTIINGLCKSNELGAGMELFEELVERGHHPDVV 252

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++  LC  G +  A  L   +      PNVVT+S LIN  CK  ++++A +L   M
Sbjct: 253 TYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEM 312

Query: 275 MEM--DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL--DVVVFSSVMDAYVG 330
                D++P++I Y+  +DGL K     E  EL+ +  D  L++  D V FS+++D    
Sbjct: 313 TRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 372

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G +  A   +D M+ GG++PNVI+Y+ L+ GLC+  ++  A  +   ++ + + P ++T
Sbjct: 373 CGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVIT 432

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ-S 444
           YS L+D FCK+ ++ +   L   M  RG  P+ V  + +I+GL      G+A + F   +
Sbjct: 433 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMA 492

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG------------------------ 480
           ++  L+P+   + TL+DG  R  RA     L   M                         
Sbjct: 493 LKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRAL 552

Query: 481 -MYN------IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +YN      + PD +T  +LI G    G+   A  LF +M+ + L PDV+T+ A+I GL
Sbjct: 553 QVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 612

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K   +     +  LM   GV P++  YN L++ L K   ++ A +   ++   G  PD 
Sbjct: 613 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 672

Query: 594 ITYNTIICGYC 604
           ITY +++   C
Sbjct: 673 ITYGSLVYALC 683



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 267/558 (47%), Gaps = 34/558 (6%)

Query: 64   SPNIA---QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE 120
            +PN+     +I  L +SD    A  +FD M ++ G       L  D +      Y  LI+
Sbjct: 462  TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHG-------LVPDKI-----TYCTLID 509

Query: 121  NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV 180
               R G+  ++  +   M D   Y     +  L      S ++  Y ++           
Sbjct: 510  GLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVT 569

Query: 181  YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
            +  L+ G  + G  E A  +  +++ +   P+++T   ++  LC  GQ+  A  + D++ 
Sbjct: 570  FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629

Query: 241  LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             +G  PNVVT++ L++  CK  ++E+A Q    M+    VPD I Y  L+  L +A R  
Sbjct: 630  NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689

Query: 301  EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
            +  +L+      G   D V ++ ++D     G   +A+   + M+  G  P+V++Y+ LI
Sbjct: 690  DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749

Query: 361  KGLCQQGRLVEACGLFGQV---LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
              LC+ G L EA  L G +   + R   P+++TYS LI+G CK G++ +   L   M+++
Sbjct: 750  DSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809

Query: 418  GLK--PDAVVCSLLINGL-----MGDALRFFFQSVR---MTLIPNLFIFNTLMDGCCRLK 467
                 P+ +  +  ++GL     M +A     +S+R   + + P+   F+TL+DG C+  
Sbjct: 810  SCDVLPNIITYNSFLDGLCKQSMMAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCG 868

Query: 468  RATDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            +  +   +F  M+ G Y   P+V+T+ VL+ G+     +  A  +   M+ +G+TPDVIT
Sbjct: 869  QTDEACNVFDDMIAGGY--VPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVIT 926

Query: 526  YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            YS ++    K  ++   L +   M   G  P++  +N +++ L K      A ++F  +T
Sbjct: 927  YSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMT 986

Query: 586  -DRGLEPDIITYNTIICG 602
               GL PD ITY T+I G
Sbjct: 987  LKHGLAPDKITYCTLIDG 1004



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 263/510 (51%), Gaps = 30/510 (5%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
            +  LI+   + G+++ + +I   M ++G+   P++V    L+  L  S  + +  +    
Sbjct: 605  FGALIDGLCKAGQVEAARDILDLMGNLGV--PPNVVTYNALVHGLCKSGRIEEACQFLEE 662

Query: 173  MRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M   G CV     Y  L+  L R    ++A  +  ++   G+ P+ VT N ++  L  +G
Sbjct: 663  MVSSG-CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSG 721

Query: 228  QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM---MEMDLVPDLI 284
            Q   A ++ + ++  G  P+VVT++TLI++ CK   LE+A +L+  M   +    VP+++
Sbjct: 722  QTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVV 781

Query: 285  IYSILIDGLFKAGRLKEGNELLLTALDRGLKL--DVVVFSSVMDAYVGIGDVGRAVQTYD 342
             YS+LI+GL K GR+ E  EL+   + +   +  +++ ++S +D       +  A +   
Sbjct: 782  TYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMR 841

Query: 343  RMLNGGFL--PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
             + +G     P+ +++S LI GLC+ G+  EAC +F  ++     P+++TY+ L++G CK
Sbjct: 842  SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCK 901

Query: 401  SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
            + K+    ++ ++M+ +G+ PD +  S+L++       + +AL            PN+  
Sbjct: 902  TDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVT 961

Query: 456  FNTLMDGCCRLKRATDTVKLFMLMGM-YNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            FN+++DG C+  ++ +  ++F  M + + + PD IT+  LI G+   G    A +L   M
Sbjct: 962  FNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM 1021

Query: 515  LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
                  PD   ++  I+GL K  ++S  LH    +E   + PD   +N+L+    K  N 
Sbjct: 1022 PD----PDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILIAGACKAGNF 1074

Query: 575  DAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            + A  LF ++  + L+PD++T+  +I G C
Sbjct: 1075 EQASALFEEMVAKNLQPDVMTFGALIDGLC 1104



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 239/497 (48%), Gaps = 50/497 (10%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ-YYKLCRAM 173
            Y+ L+    + G+I+E+ +    M   G             C+ DS + G   Y LCRA 
Sbjct: 640  YNALVHGLCKSGRIEEACQFLEEMVSSG-------------CVPDSITYGSLVYALCRAS 686

Query: 174  RG----------KGF------CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            R           K F        Y  L++GL + G  E A  +  +++ +G  P++VT N
Sbjct: 687  RTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYN 746

Query: 218  KILKRLCINGQIGNASSLFDVLLLVGPK---PNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
             ++  LC  G +  A  L   +     +   PNVVT+S LIN  CK  ++++A +L   M
Sbjct: 747  TLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEM 806

Query: 275  MEM--DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL--DVVVFSSVMDAYVG 330
            M    D++P++I Y+  +DGL K   + E  EL+ +  D  L++  D V FS+++D    
Sbjct: 807  MRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 866

Query: 331  IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
             G    A   +D M+ GG++PNV++Y++L+ GLC+  ++  A  +   ++ + + P ++T
Sbjct: 867  CGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVIT 926

Query: 391  YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ-S 444
            YS L+D FCK+  + +   L   M  RG  P+ V  + +I+GL      G+A + F   +
Sbjct: 927  YSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMT 986

Query: 445  VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            ++  L P+   + TL+DG  R   A     L   M      PD       I G++  G +
Sbjct: 987  LKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDV 1042

Query: 505  SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
            S A+    +ML+  L PD +T++ +I G  K  N      +F+ M    + PD+  +  L
Sbjct: 1043 SRAL---HRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGAL 1099

Query: 565  LNMLIKECNLDAALKLF 581
            ++ L K   ++A   + 
Sbjct: 1100 IDGLCKAGQVEATWDIM 1116



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 213/477 (44%), Gaps = 84/477 (17%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA---------- 257
           GF   I + NK L  L  +G    A  LF   L    +PN  T+STL+ A          
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 258 ------------------------FCKEAKLEKAFQLYNLMMEMD-LVPDLIIYSILIDG 292
                                    C+  +  +A +++   M  D + P ++ Y+ +I+G
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L K+  L  G EL    ++RG   DVV +++++D+    GD+  A + +  M +   +PN
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQV--------------------------------L 380
           V++YS+LI GLC+ GR+ EA  L  ++                                L
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345

Query: 381 IR-------RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           +R       R+ P  +T+S+LIDG CK G++ +  S++D+MI  G  P+ +  + L+NGL
Sbjct: 346 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 405

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                M  A       V   + P++  ++ L+D  C+  R  + ++L   M      P+V
Sbjct: 406 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNV 465

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQM-LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           +T   +I G+        A  +F  M LK GL PD ITY  +I GLF+         +  
Sbjct: 466 VTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLD 525

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            M      PD   +N  +N L K  ++  AL+++ ++ +  L PD +T+N +I G C
Sbjct: 526 AMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGAC 578



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 4/181 (2%)

Query: 428 LLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK-LFMLMGMYNIKP 486
           L+ +G    A+  F   +     PN F ++TL+      K   D  + L     + +   
Sbjct: 121 LVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRA--TYKAGGDVERTLGFFRRIRSSSR 178

Query: 487 DVITHTVLIRGIASQGSLSSAILLFF-QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
            V  + ++++ +   G  + A+ +F  +M + G+ P ++TY+ II+GL K   +  G+ +
Sbjct: 179 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 238

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           F+ +   G  PD+  YN L++ L K  +L+ A +L G ++ R   P+++TY+ +I G C 
Sbjct: 239 FEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCK 298

Query: 606 L 606
           +
Sbjct: 299 V 299



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 21/194 (10%)

Query: 83   ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIG--KIDESVEIFAYMSD 140
            ASHV + + +  G            +   GC  + +  N +  G  K D+S E F    D
Sbjct: 937  ASHVDEALELLHG------------MASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDD 984

Query: 141  MGIY--LSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIEN 196
            M +   L+PD +    L+  L  +   GQ   L  AM       +   +NGL + G +  
Sbjct: 985  MTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSR 1044

Query: 197  AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
            A H   ++++   VP+ VT N ++   C  G    AS+LF+ ++    +P+V+TF  LI+
Sbjct: 1045 ALH---RMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 1101

Query: 257  AFCKEAKLEKAFQL 270
              CK  ++E  + +
Sbjct: 1102 GLCKAGQVEATWDI 1115



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAP 556
           +   GS + AI LF   L     P+  TYS ++   +K G ++   L  F+ +  +  + 
Sbjct: 121 LVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRS- 179

Query: 557 DIAIYNVLLNMLIKECNLDAALKLF-GQLTDRGLEPDIITYNTIICGYCSLNS 608
            +A YN++L  L +      AL++F G++   G+ P I+TYNTII G C  N 
Sbjct: 180 -VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNE 231


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 232/422 (54%), Gaps = 8/422 (1%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L+R G +E+ F     ++ RG +P+I+ C  +++  C  G+   A+ + ++L   G  P+
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V+T++ LI+ +CK  +++ A Q+ +    M++ PD++ Y+ ++  L  +G+LK+  E+L 
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             L +    DV+ ++ +++A      VG+A++  D M N G  P+V++Y++LI G+C++G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           RL EA      +     +P+++T++ ++   C +G+  D   L  +M+++G  P  V  +
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 428 LLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +LIN     GL+G A+    +       PN   +N L+ G C+ K+    ++   +M   
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
              PD++T+  L+  +   G +  A+ +  Q+  +G +P +ITY+ +I GL K       
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           + +   M R G+ PDI  Y+ L++ L +E  +D A+K F  L   G+ P+ ITYN+I+ G
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483

Query: 603 YC 604
            C
Sbjct: 484 LC 485



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 210/416 (50%), Gaps = 10/416 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            Y  L++G  + G I+NA     QV+ R    P++VT N IL+ LC +G++  A  + D 
Sbjct: 129 TYNVLISGYCKSGEIDNAL----QVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 184

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
            L     P+V+T++ LI A CKE+ + +A +L + M      PD++ Y++LI+G+ K GR
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 244

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L E  + L      G + +V+  + ++ +    G    A +    ML  G  P+V++++I
Sbjct: 245 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 304

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI  LC+QG L  A  +  ++ +    P+ L+Y+ L+ GFCK  K+       D M+ RG
Sbjct: 305 LINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 364

Query: 419 LKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             PD V  + L+  L  D     A+    Q       P L  +NT++DG  ++ +    +
Sbjct: 365 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 424

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           KL   M    +KPD+IT++ L+ G++ +G +  AI  F  +   G+ P+ ITY++I+ GL
Sbjct: 425 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 484

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            K +     +     M      P  A Y +L+  +  E     AL L  +L  RGL
Sbjct: 485 CKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 211/447 (47%), Gaps = 45/447 (10%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAM 173
           + LI  + RIGK  ++  +   +   G    PD++    L+S    S  +    ++   M
Sbjct: 96  TSLIRGFCRIGKTKKATWVMEILEQSGAV--PDVITYNVLISGYCKSGEIDNALQVLDRM 153

Query: 174 R-GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
                   Y  ++  L   G ++ A  +  + +Q+   P+++T   +++  C    +G A
Sbjct: 154 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 213

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             L D +   G KP+VVT++ LIN  CKE +L++A +  N M      P++I ++I++  
Sbjct: 214 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 273

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ------------- 339
           +   GR  +  +LL   L +G    VV F+ +++     G +GRA+              
Sbjct: 274 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 333

Query: 340 --TYDRMLNG--------------------GFLPNVISYSILIKGLCQQGRLVEACGLFG 377
             +Y+ +L+G                    G  P++++Y+ L+  LC+ G++  A  +  
Sbjct: 334 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 393

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
           Q+  +   P L+TY+++IDG  K GK      L D M ++GLKPD +  S L++GL    
Sbjct: 394 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 453

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            + +A++FF     + + PN   +N++M G C+ ++    +     M     KP   T+T
Sbjct: 454 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 513

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGL 519
           +LI GIA +G    A+ L  ++  RGL
Sbjct: 514 ILIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 169/365 (46%), Gaps = 43/365 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ ++      GK+ +++E+         Y  PD++    L+      + VGQ  KL   
Sbjct: 162 YNTILRTLCDSGKLKQAMEVLDRQLQKECY--PDVITYTILIEATCKESGVGQAMKLLDE 219

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR KG       Y  L+NG+ ++G ++ A      +   G  PN++T N IL+ +C  G+
Sbjct: 220 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 279

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLIN-------------------------------- 256
             +A  L   +L  G  P+VVTF+ LIN                                
Sbjct: 280 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 339

Query: 257 ---AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
               FCKE K+++A +  ++M+     PD++ Y+ L+  L K G++    E+L     +G
Sbjct: 340 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 399

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
               ++ +++V+D    +G   RA++  D M   G  P++I+YS L+ GL ++G++ EA 
Sbjct: 400 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 459

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             F  +    + P+ +TY+S++ G CKS +          MI +  KP     ++LI G+
Sbjct: 460 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 519

Query: 434 MGDAL 438
             + L
Sbjct: 520 AYEGL 524



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 155/311 (49%), Gaps = 8/311 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI    + G++DE+++    M   G    P+++    ++  +  +       KL   
Sbjct: 232 YNVLINGICKEGRLDEAIKFLNNMPSYGC--QPNVITHNIILRSMCSTGRWMDAEKLLSD 289

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       +  L+N L R+G++  A  +  ++   G  PN ++ N +L   C   +
Sbjct: 290 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A    D+++  G  P++VT++TL+ A CK+ K++ A ++ N +      P LI Y+ 
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 409

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +IDGL K G+ +   +LL     +GLK D++ +SS++      G V  A++ +  +   G
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN I+Y+ ++ GLC+  +   A      ++ +R +P+  TY+ LI+G    G  ++  
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 529

Query: 409 SLYDNMIKRGL 419
            L + +  RGL
Sbjct: 530 DLLNELCSRGL 540



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 112/211 (53%), Gaps = 8/211 (3%)

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALR--FFFQSVRMT-LIPNLF 454
           ++G+L DGF   ++M+ RG  PD + C+ LI G   +G   +  +  + +  +  +P++ 
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +N L+ G C+     + +++   M   N+ PDV+T+  ++R +   G L  A+ +  + 
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           L++   PDVITY+ +I    K   +   + +   M   G  PD+  YNVL+N + KE  L
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           D A+K    +   G +P++IT+N I+   CS
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCS 276


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 251/487 (51%), Gaps = 13/487 (2%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMR--GKGFCVYEF 183
           ID+++  F  M  M     P +V+  R +  +           LC  M   G    VY  
Sbjct: 73  IDDALASFYRMLRMNP--RPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSL 130

Query: 184 --LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             L+N L R   +  A  +  ++ + G  P+ +T N ++   CI G+I  A  LF+ ++ 
Sbjct: 131 NILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVR 190

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G +P+V+++ST+IN  CK      A QL   M E    P+L+ Y+ +ID L K   + +
Sbjct: 191 RGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVND 250

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             +LL   +DRG+  DVV +S+++  +  +G +  A   ++ M+    +PN ++++IL+ 
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GLC++G + EA  +F  +  +  EP+  TY++L+DG+C + ++ +   + D M+ +G  P
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
                ++LING      + +A     +     L P+   ++TLM G C++ R  + + LF
Sbjct: 371 VVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLF 430

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    + PD++T++ L+ G+   G L  A+ L   M +  + PD++ Y+ +I G+F  
Sbjct: 431 KEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIA 490

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             + V   +F  +  +G+ P I  Y +++  L+KE   D A +LF ++ D G  P+  +Y
Sbjct: 491 GKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSY 550

Query: 597 NTIICGY 603
           N II G+
Sbjct: 551 NVIIQGF 557



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 259/535 (48%), Gaps = 44/535 (8%)

Query: 47  NPTPAI-QFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFR 105
           NP P++ +F ++  +       + ++ +  Q D+              FG T+N + L  
Sbjct: 87  NPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDL--------------FGVTHNVYSL-- 130

Query: 106 DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD------ 159
                     + LI    R+  +  ++ +   M  +GI   PD +    + L++      
Sbjct: 131 ----------NILINCLCRLNHVVFAISVLGKMFKLGI--QPDAIT--FNTLINGRCIEG 176

Query: 160 --SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
               +VG + ++ R         Y  ++NGL + G    A  + R++ ++G  PN+V   
Sbjct: 177 EIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYT 236

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            I+  LC +  + +A  L   ++  G  P+VVT+ST+++ FC    L +A  L+N M+  
Sbjct: 237 TIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR 296

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           +++P+ + ++IL+DGL K G + E   +      +G + +   ++++MD Y     +  A
Sbjct: 297 NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEA 356

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            +  D M++ G  P V SY+ILI G C++ RL EA  L  ++  + L P  +TYS+L+ G
Sbjct: 357 QKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQG 416

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
            C+ G+ ++  +L+  M   GL PD +  S L++GL     + +AL+         + P+
Sbjct: 417 LCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPD 476

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           + ++N L++G     +     +LF  +    I+P + T+T++I+G+  +G    A  LF 
Sbjct: 477 IVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFR 536

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           +M   G  P+  +Y+ II G  + ++ S  + +   M     + D + + +LL++
Sbjct: 537 KMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDL 591



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 186/383 (48%), Gaps = 40/383 (10%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +A + F  +L + P+P+VV F   + +  K+ +      L N M    +  ++   +I
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+ L                     +L+ VVF               A+    +M   G
Sbjct: 133 LINCL--------------------CRLNHVVF---------------AISVLGKMFKLG 157

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ I+++ LI G C +G + EA GLF +++ R  +P +++YS++I+G CKSG      
Sbjct: 158 IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMAL 217

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L   M ++G KP+ V  + +I+ L     + DA+    + V   + P++  ++T++ G 
Sbjct: 218 QLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGF 277

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C L    +   LF  M   N+ P+ +T T+L+ G+  +G +S A  +F  M K+G  P+ 
Sbjct: 278 CSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNA 337

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+A++ G      +     +  +M   G AP +  YN+L+N   K   LD A  L  +
Sbjct: 338 YTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVE 397

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           ++++ L PD +TY+T++ G C +
Sbjct: 398 MSEKELTPDTVTYSTLMQGLCQV 420



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 6/117 (5%)

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           S+  A+  F++ML+    P V+ +   +  + K K  S  + +   M+  GV  ++   N
Sbjct: 72  SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           +L+N L +  ++  A+ + G++   G++PD IT+NT+I G C      I+G  K  +
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRC------IEGEIKEAV 182


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 232/422 (54%), Gaps = 8/422 (1%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L+R G +E+ F     ++ RG +P+I+ C  +++  C  G+   A+ + ++L   G  P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V+T++ LI+ +CK  +++ A Q+ +    M++ PD++ Y+ ++  L  +G+LK+  E+L 
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             L +    DV+ ++ +++A      VG+A++  D M N G  P+V++Y++LI G+C++G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           RL EA      +     +P+++T++ ++   C +G+  D   L  +M+++G  P  V  +
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 428 LLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +LIN     GL+G A+    +       PN   +N L+ G C+ K+    ++   +M   
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
              PD++T+  L+  +   G +  A+ +  Q+  +G +P +ITY+ +I GL K       
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           + +   M R G+ PDI  Y+ L++ L +E  +D A+K F  L   G+ P+ ITYN+I+ G
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540

Query: 603 YC 604
            C
Sbjct: 541 LC 542



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 210/416 (50%), Gaps = 10/416 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            Y  L++G  + G I+NA     QV+ R    P++VT N IL+ LC +G++  A  + D 
Sbjct: 186 TYNVLISGYCKSGEIDNAL----QVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 241

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
            L     P+V+T++ LI A CKE+ + +A +L + M      PD++ Y++LI+G+ K GR
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 301

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L E  + L      G + +V+  + ++ +    G    A +    ML  G  P+V++++I
Sbjct: 302 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 361

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI  LC+QG L  A  +  ++ +    P+ L+Y+ L+ GFCK  K+       D M+ RG
Sbjct: 362 LINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 421

Query: 419 LKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             PD V  + L+  L  D     A+    Q       P L  +NT++DG  ++ +    +
Sbjct: 422 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 481

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           KL   M    +KPD+IT++ L+ G++ +G +  AI  F  +   G+ P+ ITY++I+ GL
Sbjct: 482 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 541

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            K +     +     M      P  A Y +L+  +  E     AL L  +L  RGL
Sbjct: 542 CKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 210/445 (47%), Gaps = 45/445 (10%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMR- 174
           LI  + RIGK  ++  +   +   G    PD++    L+S    S  +    ++   M  
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAV--PDVITYNVLISGYCKSGEIDNALQVLDRMNV 212

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++  L   G ++ A  +  + +Q+   P+++T   +++  C    +G A  
Sbjct: 213 APDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMK 272

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L D +   G KP+VVT++ LIN  CKE +L++A +  N M      P++I ++I++  + 
Sbjct: 273 LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 332

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ--------------- 339
             GR  +  +LL   L +G    VV F+ +++     G +GRA+                
Sbjct: 333 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 392

Query: 340 TYDRMLNG--------------------GFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           +Y+ +L+G                    G  P++++Y+ L+  LC+ G++  A  +  Q+
Sbjct: 393 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 452

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
             +   P L+TY+++IDG  K GK      L D M ++GLKPD +  S L++GL     +
Sbjct: 453 SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKV 512

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++FF     + + PN   +N++M G C+ ++    +     M     KP   T+T+L
Sbjct: 513 DEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTIL 572

Query: 495 IRGIASQGSLSSAILLFFQMLKRGL 519
           I GIA +G    A+ L  ++  RGL
Sbjct: 573 IEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 169/365 (46%), Gaps = 43/365 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ ++      GK+ +++E+         Y  PD++    L+      + VGQ  KL   
Sbjct: 219 YNTILRTLCDSGKLKQAMEVLDRQLQKECY--PDVITYTILIEATCKESGVGQAMKLLDE 276

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR KG       Y  L+NG+ ++G ++ A      +   G  PN++T N IL+ +C  G+
Sbjct: 277 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 336

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLIN-------------------------------- 256
             +A  L   +L  G  P+VVTF+ LIN                                
Sbjct: 337 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 396

Query: 257 ---AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
               FCKE K+++A +  ++M+     PD++ Y+ L+  L K G++    E+L     +G
Sbjct: 397 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 456

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
               ++ +++V+D    +G   RA++  D M   G  P++I+YS L+ GL ++G++ EA 
Sbjct: 457 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 516

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             F  +    + P+ +TY+S++ G CKS +          MI +  KP     ++LI G+
Sbjct: 517 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 576

Query: 434 MGDAL 438
             + L
Sbjct: 577 AYEGL 581



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 155/311 (49%), Gaps = 8/311 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI    + G++DE+++    M   G    P+++    ++  +  +       KL   
Sbjct: 289 YNVLINGICKEGRLDEAIKFLNNMPSYGC--QPNVITHNIILRSMCSTGRWMDAEKLLSD 346

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       +  L+N L R+G++  A  +  ++   G  PN ++ N +L   C   +
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A    D+++  G  P++VT++TL+ A CK+ K++ A ++ N +      P LI Y+ 
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +IDGL K G+ +   +LL     +GLK D++ +SS++      G V  A++ +  +   G
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN I+Y+ ++ GLC+  +   A      ++ +R +P+  TY+ LI+G    G  ++  
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 586

Query: 409 SLYDNMIKRGL 419
            L + +  RGL
Sbjct: 587 DLLNELCSRGL 597



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 112/211 (53%), Gaps = 8/211 (3%)

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALR--FFFQSVRMT-LIPNLF 454
           ++G+L DGF   ++M+ RG  PD + C+ LI G   +G   +  +  + +  +  +P++ 
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +N L+ G C+     + +++   M   N+ PDV+T+  ++R +   G L  A+ +  + 
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           L++   PDVITY+ +I    K   +   + +   M   G  PD+  YNVL+N + KE  L
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           D A+K    +   G +P++IT+N I+   CS
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCS 333


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 250/514 (48%), Gaps = 54/514 (10%)

Query: 114 DYSFLIENYVRIGKIDESVEIF-AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           DY+ ++++  R G+   ++EIF   M+  G+  +P +V                      
Sbjct: 47  DYNIVLQSLCRAGETARALEIFRGEMARDGV--APTIV---------------------- 82

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
                   Y  ++NGL +   +     +  ++++RG  P++VT N ++  LC  G +  A
Sbjct: 83  -------TYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEA 135

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM--DLVPDLIIYSILI 290
             L   +   G  PNVVT+S LIN  CK  ++++A +L   M     D++P++I Y+  +
Sbjct: 136 RRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 195

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKL--DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           DGL K     E  EL+ +  D  L++  D V FS+++D     G    A    D M+ GG
Sbjct: 196 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGG 253

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           ++PNV++Y+ L+ GLC+  ++  A  +   ++ + + P ++TYS L+D FCK+ ++ +  
Sbjct: 254 YVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 313

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L   M  RG  P+ V  + +I+GL      G+A +   Q     L+P+   FN L+ G 
Sbjct: 314 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGA 373

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+         LF  M   N++PDV+T   LI G+   G + +A  +   M   G+ P+V
Sbjct: 374 CKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 433

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY+ ++HGL K   I       + M  +G  P+   Y  L+  L +    D AL+L  +
Sbjct: 434 VTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSK 493

Query: 584 LTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
           L   G +PD +TYN            L+DG +KS
Sbjct: 494 LKSFGWDPDTVTYNI-----------LVDGLWKS 516



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 266/560 (47%), Gaps = 66/560 (11%)

Query: 66  NIAQLIHVLLQSDMRDVASH-VFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLI 119
           N+  L    ++S  R VA + +  + + + G+T     +FR  +   G       Y+ +I
Sbjct: 29  NLCPLKFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTII 88

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG 177
               +  ++   +E+F  +   G +  PD+V    L+  L  +  + +  +L   M  +G
Sbjct: 89  NGLCKSNELGAGMELFEELVKRGHH--PDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRG 146

Query: 178 FCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRG--FVPNIVTCNKILKRLCINGQIG 230
            CV     Y  L+NGL + G I+ A  + +++ ++    +PNI+T N  L  LC      
Sbjct: 147 -CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 205

Query: 231 NA----SSLFDVLLLVGPK-------------------------------PNVVTFSTLI 255
            A     SL D  L V P                                PNVVT++ L+
Sbjct: 206 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALV 265

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N  CK  K+E+A  +   M++  + PD+I YS+L+D   KA R+ E  ELL     RG  
Sbjct: 266 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 325

Query: 316 LDVVVFSSVMDAYVGIGDVGRA----VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            +VV F+S++D        G A    +Q Y+RML    +P+ ++++ILI G C+ G   +
Sbjct: 326 PNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRML----VPDKVTFNILIAGACKAGNFEQ 381

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  LF +++ + ++P ++T+ +LIDG CK+G++     + D M   G+ P+ V  ++L++
Sbjct: 382 ASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVH 441

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           GL     + +   F  + V    +P    + +L+   CR  R  D ++L   +  +   P
Sbjct: 442 GLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDP 501

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           D +T+ +L+ G+   G    AI +  +M+ +G  PD  T++A   GL +  N++  + + 
Sbjct: 502 DTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELL 561

Query: 547 KLMERNGVAPDIAIYNVLLN 566
           +++   G+ PD    + +L+
Sbjct: 562 RVVLAKGMLPDATTCSSILD 581



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 72/120 (60%), Gaps = 1/120 (0%)

Query: 488 VITHTVLIRGIASQGSLSSAILLFF-QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           V  + ++++ +   G  + A+ +F  +M + G+ P ++TY+ II+GL K   +  G+ +F
Sbjct: 45  VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + + + G  PD+  YN L++ L K  +L+ A +L G ++ RG  P+++TY+ +I G C +
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164



 Score = 42.0 bits (97), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 558 IAIYNVLLNMLIKECNLDAALKLF-GQLTDRGLEPDIITYNTIICGYCSLNS 608
           +A YN++L  L +      AL++F G++   G+ P I+TYNTII G C  N 
Sbjct: 45  VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNE 96


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 257/487 (52%), Gaps = 9/487 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
           K+D++V +F  M     + S     +L+S +   N       L   M+  G       Y 
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            L+N   R+  +  A  +  ++++ G+ P+IVT + +L   C   +I  A +L D ++ +
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G KP+ VTF+TLI+      K  +A  L + M+     PDL  Y  +++GL K G +   
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             LL       ++ +VV++++++D       +  A   +++M   G  P+V +Y+ LI  
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC  GR  +A  L   ++ R++ P+++T++SLID F K GKL +   L+D MI+R + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + LING      + +A + F   V    +P++  +NTL+ G C+ KR  + ++LF 
Sbjct: 361 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFR 420

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    +  + +T+  LI+G+   G    A  +F +M+  G+ PD+ITYS ++ GL K  
Sbjct: 421 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 480

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +   L +F+ ++++ + P+I  YN+++  + K   ++    LF  L+ +G++P++I Y 
Sbjct: 481 KLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 540

Query: 598 TIICGYC 604
           T+I G+C
Sbjct: 541 TMISGFC 547



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 284/589 (48%), Gaps = 39/589 (6%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
           S+  +S+L+ + A A+   ++K+  P P+I  F            ++L+  + + +  DV
Sbjct: 53  SRNGLSELKLDDAVALFGEMVKSR-PFPSIIEF------------SKLLSAIAKMNKFDV 99

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
              + ++M    G  +N +             YS L+  + R  ++  ++ +   M  +G
Sbjct: 100 VISLGEQMQ-NLGIPHNHYT------------YSILLNCFCRRSQLPLALAVLGKMMKLG 146

Query: 143 IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIEN 196
               PD+V    L++       + +   L   M   G+      +  L++GL        
Sbjct: 147 --YEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASE 204

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  +  +++ RG  P++ T   ++  LC  G I  A SL   +     + NVV ++T+I+
Sbjct: 205 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIID 264

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK   ++ AF L+N M    + PD+  Y+ LI  L   GR  + + LL   ++R +  
Sbjct: 265 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINP 324

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV F+S++DA+   G +  A + +D M+     PN+++Y+ LI G C   RL EA  +F
Sbjct: 325 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-- 434
             ++ +   P ++TY++LI GFCK+ ++ +G  L+  M +RGL  + V  + LI GL   
Sbjct: 385 TLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 444

Query: 435 GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           GD   A + F + V   + P++  ++ L+DG C+  +    + +F  +    ++P++ T+
Sbjct: 445 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTY 504

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            ++I G+   G +     LF  +  +G+ P+VI Y+ +I G  +         +F+ M+ 
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 564

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +G  PD   YN L+   +++ +  A+ +L  ++   G   D  T + +I
Sbjct: 565 DGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 613



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 222/472 (47%), Gaps = 47/472 (9%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LIH L   +    A  + D+MV + G   + F             Y  ++    + G ID
Sbjct: 192 LIHGLFLHNKASEAVALIDRMVAR-GCQPDLFT------------YGTVVNGLCKRGDID 238

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLM 185
            ++ +   M    I  +  +   ++  L     +   + L   M  KG       Y  L+
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLI 298

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           + L   G   +A  +   +I+R   PN+VT N ++      G++  A  LFD ++     
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 358

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PN+VT+++LIN FC   +L++A Q++ LM+  D +PD++ Y+ LI G  KA R++EG EL
Sbjct: 359 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMEL 418

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
                 RGL  + V +++++      GD   A + + +M++ G  P++I+YSIL+ GLC+
Sbjct: 419 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 478

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G+L +A  +F  +   ++EP++ TY+ +I+G CK+GK+ DG+ L+              
Sbjct: 479 YGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLF-------------- 524

Query: 426 CSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           CSL + G+                 PN+ I+ T++ G CR     +   LF  M      
Sbjct: 525 CSLSLKGVK----------------PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 568

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
           PD   +  LIR     G  +++  L  +M   G   D  T S +I+ L  G+
Sbjct: 569 PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 620



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 229/476 (48%), Gaps = 34/476 (7%)

Query: 135 FAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVY-EFLMNGLLRKGV 193
           FA  S    ++   LV R  +  V S S+  +++  RA  GK    Y E L    L +  
Sbjct: 5   FAIASTAKRFVHRSLVVRGNAATV-SPSLSFFWR--RAFSGKTSYDYREKLSRNGLSELK 61

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +++A  +  ++++    P+I+  +K+L  +    +     SL + +  +G   N  T+S 
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L+N FC+ ++L  A  +   MM++   PD++  S L++G     R+ E   L+   ++ G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            K D V F++++           AV   DRM+  G  P++ +Y  ++ GLC++G +  A 
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L  ++   ++E +++ Y+++IDG CK   + D F L++ M  +G+KPD           
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD----------- 290

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
                              +F +N+L+   C   R +D  +L   M    I P+V+T   
Sbjct: 291 -------------------VFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNS 331

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI   A +G L  A  LF +M++R + P+++TY+++I+G      +     +F LM    
Sbjct: 332 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 391

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             PD+  YN L+    K   ++  ++LF +++ RGL  + +TYNT+I G      C
Sbjct: 392 CLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 447



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 128/264 (48%), Gaps = 9/264 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  +    ++DE+ +IF  M        PD+V    L+     +  V +  +L R 
Sbjct: 364 YNSLINGFCMHDRLDEAQQIFTLMVSKDCL--PDVVTYNTLIKGFCKAKRVEEGMELFRE 421

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ GL + G  + A  + ++++  G  P+I+T + +L  LC  G+
Sbjct: 422 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 481

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F+ L     +PN+ T++ +I   CK  K+E  + L+  +    + P++IIY+ 
Sbjct: 482 LEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 541

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I G  + G  +E + L     + G   D   +++++ A +  GD   + +    M + G
Sbjct: 542 MISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 601

Query: 349 FLPNVISYSILIKGLCQQGRLVEA 372
           F+ +  + S++I  L   GRL ++
Sbjct: 602 FVGDASTISMVINML-HDGRLEKS 624


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 268/547 (48%), Gaps = 55/547 (10%)

Query: 111 FGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSV 163
           FGC      Y+ L+   +   K DE+   F Y   MG  LSP+L     L+         
Sbjct: 83  FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMG--LSPNLQTYNILIKISCRKKQF 140

Query: 164 GQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            +  +L   M G+GF      Y  L+N L + G + +A  +  ++ +RG  P++   N +
Sbjct: 141 DKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 200

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPK--PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           +      G I NAS +++  LL GP   PN+ +++ +IN  CK  K +++F++++ M + 
Sbjct: 201 IDGFFKKGDILNASEIWE-RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN 259

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG-- 335
           +   DL  YS LI GL  +G L     +     + G+  DVVV++++++ Y+  G +   
Sbjct: 260 ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC 319

Query: 336 ------------RAVQTYDRMLNGGF--------------LP------NVISYSILIKGL 363
                       R V +Y+ ++ G F              LP      + ++Y +L+ GL
Sbjct: 320 LELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 379

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+ G L +A  +  +    R +     YSS+I+G C+ G+L +   + D M K G KP+ 
Sbjct: 380 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 439

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            VC+ +ING      + DALRFF   V     P +  +NTL++G  + +R ++   L   
Sbjct: 440 YVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 499

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M     KP++IT+++L+ G+     L  A+ L+ Q L++G  PDV  ++ IIHGL     
Sbjct: 500 MLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 559

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   L ++  M++    P++  +N L+    K  + + A K++  +   GL+PDII+YN 
Sbjct: 560 VEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNI 619

Query: 599 IICGYCS 605
            + G CS
Sbjct: 620 TLKGLCS 626



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/447 (23%), Positives = 210/447 (46%), Gaps = 51/447 (11%)

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV-GPKPNVVTFSTLIN 256
           FH    +++R F P +V           N     A  +F  +  + G +P + ++++L+N
Sbjct: 46  FH---HILKRLFDPKLVA-----HAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLN 97

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           A  +  K ++A   +     M L P+L  Y+ILI    +  +  +  ELL     +G   
Sbjct: 98  ALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSP 157

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           DV  + +++++    G +  A++ +D M   G  P+V  Y+ILI G  ++G ++ A  ++
Sbjct: 158 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 217

Query: 377 GQVLI-RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
            ++L    + P++ +Y+ +I+G CK GK  + F ++  M K     D    S LI+GL G
Sbjct: 218 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 277

Query: 436 D-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
                 A R + +     + P++ ++NT+++G  R  R  + ++L+ +M     +  V++
Sbjct: 278 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVS 336

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           + +LIRG+     +  AI ++  + ++    D +TY  ++HGL K   ++  L + +  E
Sbjct: 337 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 396

Query: 551 -----------------------------------RNGVAPDIAIYNVLLNMLIKECNLD 575
                                              ++G  P+  + N ++N  ++   L+
Sbjct: 397 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLE 456

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICG 602
            AL+ FG +  +G  P ++TYNT+I G
Sbjct: 457 DALRFFGNMVSKGCFPTVVTYNTLING 483



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/416 (23%), Positives = 190/416 (45%), Gaps = 53/416 (12%)

Query: 68  AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGK 127
           + LIH L  S   D A+ V+ +M               + +      Y+ ++  Y+R G+
Sbjct: 269 STLIHGLCGSGNLDGATRVYKEMA-------------ENGVSPDVVVYNTMLNGYLRAGR 315

Query: 128 IDESVEIFAYMSDMG--IYLSPDLVQRLM-------------------SCLVDSNSVGQ- 165
           I+E +E++  M   G    +S +++ R +                    C  DS + G  
Sbjct: 316 IEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 375

Query: 166 YYKLCR-------------AMRGKG---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
            + LC+             A  G+G      Y  ++NGL R+G ++    +  Q+ + G 
Sbjct: 376 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 435

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PN   CN ++       ++ +A   F  ++  G  P VVT++TLIN   K  +  +A+ 
Sbjct: 436 KPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 495

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L   M++    P++I YS+L++GL +  +L     L   AL++G K DV + + ++    
Sbjct: 496 LVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 555

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G V  A+Q Y  M     +PN+++++ L++G  +      A  ++  +L   L+P ++
Sbjct: 556 SSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDII 615

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
           +Y+  + G C   ++ D     ++ + RG+ P A+  ++L+ G +  AL+ + + V
Sbjct: 616 SYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYL--ALKGYMEPV 669



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 11/136 (8%)

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
           ++  +P + ++  L+  +        A   F      GL+P++ TY+ +I    + K   
Sbjct: 82  IFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFD 141

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               +   M   G +PD+  Y  L+N L K   +  ALKLF ++ +RG+ PD+  YN   
Sbjct: 142 KAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNI-- 199

Query: 601 CGYCSLNSCLIDGYFK 616
                    LIDG+FK
Sbjct: 200 ---------LIDGFFK 206



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 6/101 (5%)

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM-ERNGVAPDIAIYNV 563
           S    +F  +LKR   P ++      H   K       L +F+ M E  G  P I  YN 
Sbjct: 40  SHTPYVFHHILKRLFDPKLVA-----HAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNS 94

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           LLN LI+    D A   F      GL P++ TYN +I   C
Sbjct: 95  LLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISC 135


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 227/422 (53%), Gaps = 6/422 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N    +  +  AF +   +++ GF PN+VT N ++   CING +  A +    L+  G
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
              +  ++ +LIN  CK  +   A QL   M E  + P+LI YS +IDGL K   + +  
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L      RG+ +DVV ++S++     +G    A +    M+ G   P+  +++IL+  L
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++GR+VEA G+F  ++ R  +P ++TY++L++GFC S  + +   L++ M+KRGL+PD 
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDV 335

Query: 424 VVCSLLINGL----MGDALRFFFQSVR-MTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  ++LING     M D     F+ +R   L+PNL  +N+L+DG C+L R +   +L   
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDE 395

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      PD++T+ + +           AI LF Q+++ G+ PD   Y  I+    KG+ 
Sbjct: 396 MCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEK 454

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           + +     + +  +G  P++  Y +++N L K+C+ D A+ L  ++ D    PD +T+ T
Sbjct: 455 LKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFET 514

Query: 599 II 600
           II
Sbjct: 515 II 516



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 194/403 (48%), Gaps = 30/403 (7%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +++++   P I   +K+L  +   G    A SLF  L   G  P++ T + LIN +C +A
Sbjct: 45  RMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQA 104

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L  AF L   +++M   P+++ ++ LI+G    G + +     L  + +G  LD   + 
Sbjct: 105 HLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYG 164

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           S+++     G    A+Q   +M      PN+I+YS +I GLC+   + +A  LF  V  R
Sbjct: 165 SLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSR 224

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            +   ++ Y+SLI G C  G+ R+   L   M++  + PD                    
Sbjct: 225 GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDD------------------- 265

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                      + FN L+D  C+  R  +   +F +M     KPD++T+  L+ G     
Sbjct: 266 -----------YTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSN 314

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++S A  LF +M+KRGL PDV+ Y+ +I+G  K   +   + +FK +    + P++A YN
Sbjct: 315 NVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYN 374

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            L++ L K   +    +L  ++ DRG  PDI+TYN  +  +C 
Sbjct: 375 SLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCK 417



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 203/422 (48%), Gaps = 35/422 (8%)

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG+ + EF    L+NGL + G   +A  + +++ +    PN++T + ++  LC +  I 
Sbjct: 153 AKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIA 212

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  LF ++   G   +VV +++LI+  C   +  +A +L  +M+  ++ PD   ++IL+
Sbjct: 213 DALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILV 272

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L K GR+ E   +    + RG K D+V ++++M+ +    +V  A + ++RM+  G  
Sbjct: 273 DALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLE 332

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V++Y++LI G C+   + EA  LF ++  + L P+L TY+SLIDG CK G++     L
Sbjct: 333 PDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQEL 392

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            D M  RG  PD V                               +N  +D  C+ K   
Sbjct: 393 VDEMCDRGQSPDIVT------------------------------YNIFLDAFCKSKPYE 422

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + LF  + +  I PD   + V++        L  A      +L  G  P+V TY+ +I
Sbjct: 423 KAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMI 481

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           + L K  +    + +   M+ N   PD   +  ++  L +    D A KL  ++ +RGL 
Sbjct: 482 NALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541

Query: 591 PD 592
            D
Sbjct: 542 ND 543



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 172/341 (50%), Gaps = 5/341 (1%)

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           +N M+     P + ++  L+  + + G       L      +G+   +   + +++ Y  
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
              +  A      +L  GF PN+++++ LI G C  G + +A      ++ +       +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           Y SLI+G CK+G+ RD   L   M +  ++P+ +  S +I+GL     + DALR F    
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              ++ ++  +N+L+ GCC + +  +  +L  +M   NI PD  T  +L+  +  +G + 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  +F  M+KRG  PD++TY+A++ G     N+S    +F  M + G+ PD+  YNVL+
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           N   K   +D A+ LF ++  + L P++ TYN++I G C L
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKL 383



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 140/308 (45%), Gaps = 40/308 (12%)

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
           +++RML     P +  +  L+  + + G    A  LF Q+  + + PS+ T + LI+ +C
Sbjct: 42  SFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYC 101

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING----------------LMG-------- 435
               L   FSL   ++K G +P+ V  + LING                LM         
Sbjct: 102 HQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEF 161

Query: 436 ----------------DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
                           DAL+   +     + PNL  ++T++DG C+ +   D ++LF L+
Sbjct: 162 SYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLV 221

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               I  DV+ +  LI G  S G    A  L   M++  + PD  T++ ++  L K   I
Sbjct: 222 TSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRI 281

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                +F +M + G  PDI  YN L+       N+  A +LF ++  RGLEPD++ YN +
Sbjct: 282 VEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVL 341

Query: 600 ICGYCSLN 607
           I GYC ++
Sbjct: 342 INGYCKID 349



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 25/229 (10%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM------SDMGIYLSPDLVQRL 153
           F R+ +  L     +Y+ LI  Y +I  +DE++ +F  +       ++  Y S  L+  L
Sbjct: 323 FNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNS--LIDGL 380

Query: 154 -----MSC---LVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVI 205
                MSC   LVD        ++C   +      Y   ++   +    E A  + RQ++
Sbjct: 381 CKLGRMSCVQELVD--------EMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV 432

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           Q G  P+    + I++  C   ++  A      LL+ G  PNV T++ +INA CK+   +
Sbjct: 433 Q-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFD 491

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           +A  L + M + D  PD + +  +I  L +     +  +L L  ++RGL
Sbjct: 492 EAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 80/170 (47%)

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           D L  F + +R    P +F+F+ L+    R+      + LF  +    I P + T T+LI
Sbjct: 38  DTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILI 97

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
                Q  LS A  L   +LK G  P+++T++ +I+G      +S  +     +   G  
Sbjct: 98  NCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYP 157

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            D   Y  L+N L K      AL+L  ++ +  + P++ITY+T+I G C 
Sbjct: 158 LDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCK 207



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 53/102 (51%)

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++   +L F +ML++   P +  +  ++  + +  +    + +F  +   G+ P IA   
Sbjct: 35  TVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLT 94

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +L+N    + +L  A  L G +   G +P+++T+NT+I G+C
Sbjct: 95  ILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFC 136


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 170/618 (27%), Positives = 292/618 (47%), Gaps = 84/618 (13%)

Query: 72  HVLLQSDMRDVASHVFDKMVIQFG--KTYNFFRLFRDSLGDFGCDYSFL---IENYVRIG 126
           H+L   ++R VA  V   ++ + G  ++ +           +  D+S L   +  +V   
Sbjct: 151 HLLAAEELRHVAQDVIWWVIARIGVLRSGDLVEFMWRGHHVYESDFSVLDSLMRAFVNAE 210

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM--RGKGFCVYEF- 183
              +++EI   M ++G+  S   V  L   L+     G  +KL + +  RG   C Y F 
Sbjct: 211 MGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFS 270

Query: 184 -LMNGLLRKGVI---ENAFHMHRQ--------------------------------VIQR 207
            ++ G  RKG I   E+  H+  +                                +I+R
Sbjct: 271 GIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIER 330

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P +VT N ++   C  G +  A  LFD L  +G  PN + ++TL+N + K  ++++A
Sbjct: 331 GCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA 390

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFK-------------------------------- 295
             LY  M +  + PD I ++IL+ G +K                                
Sbjct: 391 NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSG 450

Query: 296 ---AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
              AGRL E  E L+  L++GL   ++ F+SV+ AY   G   +A + Y  M++ G  P+
Sbjct: 451 LCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 510

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             + S L+ GL   GRL EA  L GQ++ + L  + + ++ L+D F K G +    SL+ 
Sbjct: 511 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 570

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M +RG+ PD V  S  I+GL     + +A   F + +R  LIPN F +N+L+ G C+  
Sbjct: 571 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG 630

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  + +KL  +M    + PD+ T  ++I G+  QG + SAI +F  M + GL+PD+ITY+
Sbjct: 631 KLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYN 690

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I+G  K  ++    ++   M  +G  PD+  YN+ ++       ++ A+ +  +L   
Sbjct: 691 TLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSA 750

Query: 588 GLEPDIITYNTIICGYCS 605
           G+ P+ +TYN+++ G CS
Sbjct: 751 GIVPNTVTYNSMLNGVCS 768



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 246/499 (49%), Gaps = 15/499 (3%)

Query: 112 GCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           GC+     ++ +I  + + G + E+ ++F  + +MG   +  +   LM+  V    + Q 
Sbjct: 331 GCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA 390

Query: 167 YKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
             L   MR KG       +  L++G  + G  E+   + + +   G +P+    +  +  
Sbjct: 391 NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSG 450

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC  G++  A      +L  G  P+++ F+++I A+ +    +KAF+ Y LM+   L P 
Sbjct: 451 LCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 510

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
               S L+ GL   GRL+E  EL+   +++GL ++ + F+ ++D +   GDV  A   + 
Sbjct: 511 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 570

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M   G  P+V+++S  I GL +QG + EA  +F ++L + L P+   Y+SLI GFCK G
Sbjct: 571 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG 630

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
           KL +   L   M  RGL PD    +++I GL     M  A+  F    +  L P++  +N
Sbjct: 631 KLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYN 690

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           TL++G C+     +   L   M      PD+ T+ + I G  S   ++ A+L+  +++  
Sbjct: 691 TLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSA 750

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G+ P+ +TY+++++G+     +   + +   + +    P++   N+LL+   K+   +  
Sbjct: 751 GIVPNTVTYNSMLNGVCSDI-LDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERT 809

Query: 578 LKLFGQLTDRGLEPDIITY 596
           L    +L++     D ITY
Sbjct: 810 LMWGHKLSEIPYAFDEITY 828



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 15/357 (4%)

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
            + I + C  A L  A +L ++        D+I + I   G+ ++G L E     +    
Sbjct: 140 ESTIRSCCVAAHLLAAEELRHV------AQDVIWWVIARIGVLRSGDLVE----FMWRGH 189

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
              + D  V  S+M A+V      +A++   RM   G  P+    +IL K L + G    
Sbjct: 190 HVYESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGN 249

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
              LF  V+ R  +P   T+S +I GFC+ G +  G SL   M K   +P+A   +++IN
Sbjct: 250 VWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVIN 309

Query: 432 -----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                G   DAL +F   +     P +  FNT+++  C+     +  KLF  +      P
Sbjct: 310 ACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSP 369

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           + I +  L+ G      +  A +L+ +M K+G+ PD IT++ ++ G +K      G  + 
Sbjct: 370 NAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLL 429

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           K +   G+ PD +++++ ++ L     LD A++    + ++GL P II +N++I  Y
Sbjct: 430 KDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAY 486



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 96/262 (36%), Gaps = 44/262 (16%)

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +VI + I   G+ + G LVE       V     E       SL+  F  +        + 
Sbjct: 164 DVIWWVIARIGVLRSGDLVEFMWRGHHVY----ESDFSVLDSLMRAFVNAEMGFQALEIL 219

Query: 412 DNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M + G++P A   ++L       G  G+  + F   +R    P  + F+ ++ G CR 
Sbjct: 220 GRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRK 279

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                   L  LM  ++ +P+   + ++I     +G  S A                   
Sbjct: 280 GCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDA------------------- 320

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
                           L  F LM   G  P +  +N ++N   KE N+  A KLF  L +
Sbjct: 321 ----------------LAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKE 364

Query: 587 RGLEPDIITYNTIICGYCSLNS 608
            G  P+ I YNT++ GY  +  
Sbjct: 365 MGFSPNAIMYNTLMNGYVKMRE 386



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 9/170 (5%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG----FC 179
           G++  ++ +F  M   G  LSPD++    L++    +  +     L   M   G      
Sbjct: 665 GRMRSAINVFMDMHQTG--LSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLT 722

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y   ++G      +  A  M  +++  G VPN VT N +L  +C +  +  A  L   L
Sbjct: 723 TYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC-SDILDRAMILTARL 781

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           L +   PNVVT + L++ F K+   E+     + + E+    D I Y I+
Sbjct: 782 LKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIM 831


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 231/422 (54%), Gaps = 8/422 (1%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L+R G +E       ++I +G +P+++ C  +++  C +G+   A+ + ++L   G  P+
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V+T++ LI  +CK  +++KA ++   +  M + PD++ Y+ ++  L  +G+LKE  E+L 
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLD 232

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             L R    DV+ ++ +++A      VG+A++  D M   G  P+V++Y++LI G+C++G
Sbjct: 233 RQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           RL EA      +     +P+++T++ ++   C +G+  D   L  +M+++G  P  V  +
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 428 LLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +LIN      L+G A+    +  +   +PN   +N L+ G C+ K+    ++   +M   
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
              PD++T+  L+  +   G + +A+ +  Q+  +G +P +ITY+ +I GL K       
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 472

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           + + + M R G+ PDI  Y+ LL  L +E  +D A+K+F  +    ++P  +TYN I+ G
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 532

Query: 603 YC 604
            C
Sbjct: 533 LC 534



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 142/561 (25%), Positives = 251/561 (44%), Gaps = 57/561 (10%)

Query: 26  HISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPN--------IAQLIHVLLQS 77
           H S L+  ++   L N +   + + A          VS+PN         +  I V    
Sbjct: 43  HFSKLKATRSRKRLENRVSAVSKSEASGLNGRLQQIVSTPNGDLNVIGMESSPIGVNGSR 102

Query: 78  DMRDVASHVFDKMVIQFGKTYNFFRLFRDSL--GDF----GCDYSFLIENYVRIGKIDES 131
              + AS++  + +++ G+     +     +  GD      C  + LI  + R GK  ++
Sbjct: 103 SFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIAC--TSLIRGFCRSGKTKKA 160

Query: 132 VEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRK 191
             I   + + G    PD++                              Y  L+ G  + 
Sbjct: 161 TRIMEILENSGAV--PDVI-----------------------------TYNVLIGGYCKS 189

Query: 192 GVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
           G I+ A     +V++R    P++VT N IL+ LC +G++  A  + D  L     P+V+T
Sbjct: 190 GEIDKAL----EVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVIT 245

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           ++ LI A C ++ + +A +L + M +    PD++ Y++LI+G+ K GRL E  + L    
Sbjct: 246 YTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 305

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
             G K +V+  + ++ +    G    A +    ML  G  P+V++++ILI  LC++  L 
Sbjct: 306 SYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLG 365

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
            A  +  ++      P+ L+Y+ L+ GFC+  K+       + M+ RG  PD V  + L+
Sbjct: 366 RAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLL 425

Query: 431 NGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
             L  D     A+    Q       P L  +NT++DG  ++ +    V+L   M    +K
Sbjct: 426 TALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLK 485

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PD+IT++ L+RG+  +G +  AI +F  M    + P  +TY+AI+ GL K +  S  +  
Sbjct: 486 PDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF 545

Query: 546 FKLMERNGVAPDIAIYNVLLN 566
              M   G  P  A Y +L+ 
Sbjct: 546 LAYMVEKGCKPTEATYTILIE 566



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 186/391 (47%), Gaps = 38/391 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ ++ +    GK+ E++E+         Y  PD++    L+    + + VGQ  KL   
Sbjct: 211 YNTILRSLCDSGKLKEAMEVLDRQLQRECY--PDVITYTILIEATCNDSGVGQAMKLLDE 268

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR KG       Y  L+NG+ ++G ++ A      +   G  PN++T N IL+ +C  G+
Sbjct: 269 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGR 328

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             +A  L   +L  G  P+VVTF+ LIN  C++  L +A  +   M +   VP+ + Y+ 
Sbjct: 329 WMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNP 388

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ G  +  ++    E L   + RG   D+V +++++ A    G V  AV+  +++ + G
Sbjct: 389 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P +I+Y+ +I GL + G+   A  L  ++  + L+P ++TYS+L+ G  + GK+ +  
Sbjct: 449 CSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAI 508

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            ++ +M    +KP AV                               +N +M G C+ ++
Sbjct: 509 KIFHDMEGLSIKPSAVT------------------------------YNAIMLGLCKAQQ 538

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            +  +     M     KP   T+T+LI GIA
Sbjct: 539 TSRAIDFLAYMVEKGCKPTEATYTILIEGIA 569



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 149/304 (49%), Gaps = 13/304 (4%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLV 158
           D +   GC      Y+ LI    + G++DE+++    M   G    P+++    ++  + 
Sbjct: 267 DEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG--CKPNVITHNIILRSMC 324

Query: 159 DSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
            +       +L   M  KG       +  L+N L RK ++  A  +  ++ + G VPN +
Sbjct: 325 STGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSL 384

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           + N +L   C   ++  A    ++++  G  P++VT++TL+ A CK+ K++ A ++ N +
Sbjct: 385 SYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQL 444

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
                 P LI Y+ +IDGL K G+ +   ELL     +GLK D++ +S+++      G V
Sbjct: 445 SSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKV 504

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A++ +  M      P+ ++Y+ ++ GLC+  +   A      ++ +  +P+  TY+ L
Sbjct: 505 DEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTIL 564

Query: 395 IDGF 398
           I+G 
Sbjct: 565 IEGI 568



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 8/211 (3%)

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLF 454
           ++G+L +G    + MI +G  PD + C+ LI G         A R          +P++ 
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +N L+ G C+   + +  K   ++   ++ PDV+T+  ++R +   G L  A+ +  + 
Sbjct: 178 TYNVLIGGYCK---SGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           L+R   PDVITY+ +I        +   + +   M + G  PD+  YNVL+N + KE  L
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           D A+K    +   G +P++IT+N I+   CS
Sbjct: 295 DEAIKFLNNMPSYGCKPNVITHNIILRSMCS 325



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 128/261 (49%), Gaps = 8/261 (3%)

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +NG       + +I ++ L + G L E      +++ +   P ++  +SLI GFC+SGK 
Sbjct: 98  VNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKT 157

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           +    + + +   G  PD +  ++LI G    G+  +      RM++ P++  +NT++  
Sbjct: 158 KKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRS 217

Query: 463 CC---RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
            C   +LK A + +   +    Y   PDVIT+T+LI    +   +  A+ L  +M K+G 
Sbjct: 218 LCDSGKLKEAMEVLDRQLQRECY---PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGC 274

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PDV+TY+ +I+G+ K   +   +     M   G  P++  +N++L  +        A +
Sbjct: 275 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAER 334

Query: 580 LFGQLTDRGLEPDIITYNTII 600
           L   +  +G  P ++T+N +I
Sbjct: 335 LLSDMLRKGCSPSVVTFNILI 355



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 103/233 (44%), Gaps = 39/233 (16%)

Query: 106 DSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           + +   GC      Y+ L+  + +  K+D ++E    M   G Y  PD+V          
Sbjct: 372 EKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY--PDIV---------- 419

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
                               Y  L+  L + G ++ A  +  Q+  +G  P ++T N ++
Sbjct: 420 -------------------TYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVI 460

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             L   G+   A  L + +   G KP+++T+STL+    +E K+++A ++++ M  + + 
Sbjct: 461 DGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIK 520

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           P  + Y+ ++ GL KA +     + L   +++G K     ++ +++   GI D
Sbjct: 521 PSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE---GIAD 570


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 255/520 (49%), Gaps = 41/520 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+ Y R GKID++V +   M  +G+  +  +   L++       + +   +   M 
Sbjct: 301 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 360

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L++G  R+G    AF++  +++Q G  P ++T N +LK LC  G   
Sbjct: 361 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 420

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  ++ +++  G  P+ V +STL++   K    E A  L+  ++        I ++ +I
Sbjct: 421 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 480

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K G++ E  E+     D G   D + + +++D Y    +VG+A +    M      
Sbjct: 481 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPIS 540

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++  Y+ LI GL +  RLVE   L  ++ IR L P+++TY +LIDG+CK G L   FS 
Sbjct: 541 PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 600

Query: 411 YDNMIKRGLKPDAVVCSLLINGL----------------------------MGDALRF-- 440
           Y  M + GL  + ++CS +++GL                            +   +R+  
Sbjct: 601 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 660

Query: 441 -------FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
                    +S +  L+PN  ++N  + G C+  +  D  + F ++ +    PD  T+  
Sbjct: 661 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 720

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI G ++ G++  A  L  +ML+RGL P+++TY+A+I+GL K +N+     +F  + + G
Sbjct: 721 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 780

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           + P++  YN L++   K  N+DAA KL  ++ + G+ P I
Sbjct: 781 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 217/431 (50%), Gaps = 41/431 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ ++   + KG+ +NA ++   + + G +P++ +CN +L  L  NG+   A  ++  +
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           + VG  P+V   S ++NAFCK+ K+++A      M  + + P+++ Y  LI+G       
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING------- 236

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                                       YV +GDV  A      M   G   NV++Y++L
Sbjct: 237 ----------------------------YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 268

Query: 360 IKGLCQQGRLVEACG-LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           IKG C+Q ++ EA   L G      L P    Y  LIDG+C++GK+ D   L D M++ G
Sbjct: 269 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 328

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           LK +  +C+ LING      + +A     + V   L P+ + +NTL+DG CR    ++  
Sbjct: 329 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 388

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M    I+P V+T+  L++G+   G+   A+ ++  M+KRG+ PD + YS ++ GL
Sbjct: 389 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 448

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           FK +N      ++K +   G       +N +++ L K   +  A ++F ++ D G  PD 
Sbjct: 449 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 508

Query: 594 ITYNTIICGYC 604
           ITY T+I GYC
Sbjct: 509 ITYRTLIDGYC 519



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 248/534 (46%), Gaps = 46/534 (8%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAM 173
           S ++  + + GK+DE+      M ++G+   P++V    L++  V    V     + + M
Sbjct: 196 SIMVNAFCKDGKVDEAAGFVKKMENLGV--EPNIVTYHSLINGYVSLGDVEAAKGVLKFM 253

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRG-FVPNIVTCNKILKRLCINGQ 228
             KG       Y  L+ G  ++  ++ A  + R + +    VP+      ++   C  G+
Sbjct: 254 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 313

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +A  L D +L +G K N+   ++LIN +CK  ++ +A  +   M++ +L PD   Y+ 
Sbjct: 314 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 373

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+DG  + G   E   L    L  G++  V+ +++++     +G    A+Q +  M+  G
Sbjct: 374 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 433

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ + YS L+ GL +      A  L+  +L R    S +T++++I G CK GK+ +  
Sbjct: 434 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 493

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            ++D M   G  PD +    LI+G      +G A +      R  + P++ ++N+L+ G 
Sbjct: 494 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 553

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            + +R  +   L   MG+  + P+++T+  LI G   +G L  A   +F+M + GL+ ++
Sbjct: 554 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 613

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD----------------IA-------- 559
           I  S ++ GL++   I     + + M  +G  PD                IA        
Sbjct: 614 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 673

Query: 560 --------IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
                   +YN+ +  L K   +D A + F  L+ +G  PD  TY T+I GY +
Sbjct: 674 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 727



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 154/376 (40%), Gaps = 76/376 (20%)

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
           L  + R       VF  ++  YV  G    A+  +D M   G +P++ S + L+  L + 
Sbjct: 111 LVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKN 170

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G    A  ++ Q++   + P +   S +++ FCK GK+ +       M   G++P+ V  
Sbjct: 171 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 230

Query: 427 SLLINGL--MGD------ALRFFFQ---------------------------------SV 445
             LING   +GD       L+F  +                                   
Sbjct: 231 HSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE 290

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLF---MLMGM--------------------- 481
              L+P+   +  L+DG CR  +  D V+L    + +G+                     
Sbjct: 291 EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIH 350

Query: 482 -----------YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
                      +N+KPD  ++  L+ G   +G  S A  L  +ML+ G+ P V+TY+ ++
Sbjct: 351 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 410

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL +       L ++ LM + GVAPD   Y+ LL+ L K  N + A  L+  +  RG  
Sbjct: 411 KGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 470

Query: 591 PDIITYNTIICGYCSL 606
              IT+NT+I G C +
Sbjct: 471 KSRITFNTMISGLCKM 486


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 227/413 (54%), Gaps = 11/413 (2%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++++RG  PN VT   ++K LC+  +I  A+ L   ++ +G +PNVVT+ TL+N  C   
Sbjct: 152 EMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTG 211

Query: 263 KLEKAFQLYNLMME------MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
               A +L+  M+       + + P+L+ Y  +ID L K G + +G EL L    RG+  
Sbjct: 212 NTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISP 271

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           DVV +SS++      G    A   ++ M++ G  PNV+++++LI  LC+ G++ EA  L 
Sbjct: 272 DVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLL 331

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
             ++ R   P   TY++LIDGFC  G++ D   L+ +M  +G++ DAV  ++LING    
Sbjct: 332 KLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKS 391

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             M +A + + + +   ++P +  +NTL+ G  R  +  D   LF  M ++++ P+  T+
Sbjct: 392 GRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTY 451

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L+ G+     LS A+ LF  +      P +  ++ +I GL K + I +   +F  +  
Sbjct: 452 NILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSH 511

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            G+ P++  Y V+++ L K   L+ A  LF  + ++G  P+++T+NT++ G+C
Sbjct: 512 EGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFC 564



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 254/490 (51%), Gaps = 19/490 (3%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           + LI  Y  + K+D  + +   M   G   SP+ V    L+  L   + + +   L R M
Sbjct: 131 NILINCYCNLNKVDFGLAVLGEMLRRG--HSPNTVTFTSLVKGLCLGSRISEATGLLRKM 188

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR--GF----VPNIVTCNKILKRL 223
              G+      Y  L+NGL   G    A  +H +++    GF     PN+V    I+  L
Sbjct: 189 VRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSL 248

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C +G I     LF  +   G  P+VV +S++I+  C   + E A  L+N M++  + P++
Sbjct: 249 CKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNV 308

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + +++LID L KAG+++E N LL   + RG   D   +++++D +   G +  A   +  
Sbjct: 309 VTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVS 368

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M + G   + +SY++LI G C+ GR+VEA  L+ +++ + + P+++TY++L+ G  + GK
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           +RD ++L+  M    L P++   ++L++GL     + +A+  F         P++ IFN 
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+DG C+ ++     +LF  +    ++P+VIT+TV+I G+   G L +A  LF  M ++G
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             P+++T++ ++ G  +   +   + + + M     +PD +  ++++++L K+      L
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYL 608

Query: 579 KLFGQLTDRG 588
            L      +G
Sbjct: 609 HLLPTFPAQG 618



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 217/455 (47%), Gaps = 46/455 (10%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            AF +   +I     P I + N +L  +    +  +  SL+  + L+G  P+ +T + LI
Sbjct: 75  EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILI 134

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N +C   K++    +   M+     P+ + ++ L+ GL    R+ E   LL   +  G +
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYR 194

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG---------------------------- 347
            +VV + ++++     G+   AV+ ++ MLNG                            
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254

Query: 348 -------------GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
                        G  P+V++YS +I G+C  GR   A GLF +++   + P+++T++ L
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVL 314

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           ID  CK+GK+ +   L   MI+RG  PD    + LI+G      + DA   F       +
Sbjct: 315 IDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGI 374

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
             +   +N L++G C+  R  +  KL+  M    I P VIT+  L+ G+  +G +  A  
Sbjct: 375 ETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWN 434

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF +M    LTP+  TY+ ++ GL K  ++S  + +F  +E +   P I I+N L++ L 
Sbjct: 435 LFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLC 494

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           K   ++ A +LF +L+  GLEP++ITY  +I G C
Sbjct: 495 KARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 192/411 (46%), Gaps = 13/411 (3%)

Query: 210 VPNIVTCNKILKRLCINGQI--GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
            P+       LK  C +G I    A S+F+ L+ + P P + +F+TL+ A  K  +    
Sbjct: 52  APDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV 111

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             LY  M  + L PD I  +ILI+      ++  G  +L   L RG   + V F+S++  
Sbjct: 112 ISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR---- 383
                 +  A     +M+  G+ PNV++Y  L+ GLC  G  + A  L  ++L       
Sbjct: 172 LCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFG 231

Query: 384 --LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
             ++P+L+ Y ++ID  CK G +  G  L+  M  RG+ PD V  S +I+G+        
Sbjct: 232 VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEG 291

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A   F + V   + PN+  FN L+D  C+  +  +   L  LM      PD  T+  LI 
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID 351

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G   +G +  A  LF  M  +G+  D ++Y+ +I+G  K   +     +++ M    + P
Sbjct: 352 GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMP 411

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            +  YN LL  L +E  +  A  LFG++    L P+  TYN ++ G C  N
Sbjct: 412 TVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNN 462



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 4/203 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+    R GK+ ++  +F  M    +         L+  L  +N + +  +L   + 
Sbjct: 416 YNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLE 475

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
              F     ++  L++GL +   IE A  +  ++   G  PN++T   ++  LC +GQ+ 
Sbjct: 476 NHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLE 535

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA  LF  +   G  PN+VTF+TL+  FC+  +++K  +L   M E D  PD    SI++
Sbjct: 536 NAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVV 595

Query: 291 DGLFKAGRLKEGNELLLTALDRG 313
           D L K  + +E   LL T   +G
Sbjct: 596 DLLSKDEKYREYLHLLPTFPAQG 618


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 219/402 (54%), Gaps = 5/402 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  PN+ T N ++   C   ++G A S+   +L +G +P+  TF+TLI   C E K+ +A
Sbjct: 95  GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 154

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L++ M++    P+++ Y  LI+GL K G       LL +      + DVV+++S++D+
Sbjct: 155 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDS 214

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                 V  A   + +M+  G  P++ +Y+ L+  LC          L  Q++  ++ P 
Sbjct: 215 LCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPD 274

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFF 442
           ++ +S+++D  CK GK+ +   + D MI+RG++PD V  + L++G      M +A++ F 
Sbjct: 275 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 334

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             VR    P++  + TL++G C++ +    + LF  M      PD  T+  L+ G+   G
Sbjct: 335 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVG 394

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  AI LF +M+ RG  PD++TYS ++  L K +++   + + K +E + + PDI +YN
Sbjct: 395 RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYN 454

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           ++++ + +   L+AA  LF  L+ +GL P + TYN +I G C
Sbjct: 455 IIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLC 496



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 222/419 (52%), Gaps = 5/419 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +  ++++ G  P+  T   +++ LC+ G+IG A  LFD ++  G +PNVVT+ TLIN
Sbjct: 119 AFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 178

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK      A +L   M + +  PD++IY+ +ID L K  ++ E   L    + +G+  
Sbjct: 179 GLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 238

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D+  ++S++ A   + +        ++M+N   LP+V+ +S ++  LC++G++ EA  + 
Sbjct: 239 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 298

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
             ++ R +EP ++TY++L+DG C   ++ +   ++D M+++G  PD +  + LING    
Sbjct: 299 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 358

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             +  A+  F +  R   IP+   +NTLM G C + R  D + LF  M      PD++T+
Sbjct: 359 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTY 418

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           ++L+  +     L  A+ L   +    L PD+  Y+ II G+ +   +     +F  +  
Sbjct: 419 SILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
            G+ P +  YN++++ L K   L+ A KLF ++      PD  TYNTI  G+   N  L
Sbjct: 479 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETL 537



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/579 (24%), Positives = 268/579 (46%), Gaps = 63/579 (10%)

Query: 21  SESKTHISDLQFNQANAILAN---LIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQS 77
           S++  H   L FN  +  L++   L+  + P   + F K   +     + + ++ +  Q 
Sbjct: 32  SQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM 91

Query: 78  DMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAY 137
           D               FG   N + L            + LI ++  + ++  +  + A 
Sbjct: 92  D--------------SFGVPPNVYTL------------NILINSFCHLNRVGFAFSVLAK 125

Query: 138 MSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGV 193
           +  +G    P     L+  L     +G+   L   M  +GF      Y  L+NGL + G 
Sbjct: 126 ILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 185

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
              A  + R + Q    P++V    I+  LC + Q+  A +LF  ++  G  P++ T+++
Sbjct: 186 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 245

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L++A C   + +    L N M+   ++PD++I+S ++D L K G++ E +E++   + RG
Sbjct: 246 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 305

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++ DVV ++++MD +    ++  AV+ +D M+  GF P+VISY+ LI G C+  ++ +A 
Sbjct: 306 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 365

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            LF ++  +   P   TY++L+ G C  G+L+D  +L+  M+ RG  PD V  S+L++ L
Sbjct: 366 YLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 425

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
                                         C+ +   + + L   +   N+ PD+  + +
Sbjct: 426 ------------------------------CKNRHLEEAMALLKAIEASNLNPDIQVYNI 455

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I G+   G L +A  LF  +  +GL P V TY+ +IHGL K   ++    +F  M+ N 
Sbjct: 456 IIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 515

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
            +PD   YN +    ++      A++L  ++  RG   D
Sbjct: 516 CSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 168/371 (45%), Gaps = 44/371 (11%)

Query: 246 PNVVTFSTLINAFCKEA----KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           P +  FS+  N F  ++     L+ A   +N ++ M   P ++ ++ L+  + K      
Sbjct: 24  PPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYS- 82

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
                           V+  S+ MD++                   G  PNV + +ILI 
Sbjct: 83  ---------------TVLSLSTQMDSF-------------------GVPPNVYTLNILIN 108

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
             C   R+  A  +  ++L    +P   T+++LI G C  GK+ +   L+D MI  G +P
Sbjct: 109 SFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQP 168

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           + V    LINGL        A+R      +    P++ I+ +++D  C+ ++ T+   LF
Sbjct: 169 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 228

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    I PD+ T+T L+  + +         L  QM+   + PDV+ +S ++  L K 
Sbjct: 229 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 288

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             ++    +  +M + GV PD+  Y  L++    +  +D A+K+F  +  +G  PD+I+Y
Sbjct: 289 GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 348

Query: 597 NTIICGYCSLN 607
            T+I GYC ++
Sbjct: 349 TTLINGYCKIH 359



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 189/423 (44%), Gaps = 69/423 (16%)

Query: 83  ASHVFDKMV------------------IQFGKTYNFFRLFRDSLGDFGCD-----YSFLI 119
           A H+FDKM+                   + G T    RL R S+    C      Y+ +I
Sbjct: 154 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR-SMEQGNCQPDVVIYTSII 212

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG 177
           ++  +  ++ E+  +F+ M   GI  SPD+     L+  L +         L   M    
Sbjct: 213 DSLCKDRQVTEAFNLFSQMVGQGI--SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 270

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                 ++  +++ L ++G +  A  +   +IQRG  P++VT   ++   C+  ++  A 
Sbjct: 271 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 330

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD----------- 282
            +FD+++  G  P+V++++TLIN +CK  K++KA  L+  M   + +PD           
Sbjct: 331 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGL 390

Query: 283 ------------------------LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
                                   L+ YSIL+D L K   L+E   LL       L  D+
Sbjct: 391 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDI 450

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
            V++ ++D     G++  A   +  + + G  P+V +Y+I+I GLC++G L EA  LF +
Sbjct: 451 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 510

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL 438
           +      P   TY+++  GF ++ +      L + M+ RG   D+  C L+++ L  D  
Sbjct: 511 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS--CFLMLSVLSEDDR 568

Query: 439 RFF 441
           R+F
Sbjct: 569 RYF 571



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 9/232 (3%)

Query: 384 LEPSLLTYSSLIDGFCKSG----KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM----- 434
           L P L  +SS  + F         L D  S ++ ++     P  V  + L+  +      
Sbjct: 22  LSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHY 81

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
              L    Q     + PN++  N L++  C L R      +   +     +PD  T T L
Sbjct: 82  STVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTL 141

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           IRG+  +G +  A+ LF +M+  G  P+V+TY  +I+GL K  N S  + + + ME+   
Sbjct: 142 IRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNC 201

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            PD+ IY  +++ L K+  +  A  LF Q+  +G+ PDI TY +++   C+L
Sbjct: 202 QPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 253



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 10/168 (5%)

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           FF S +         FNTL D      R         L+ M+   P ++    L+  IA 
Sbjct: 28  FFSSSQNNFHSKSLHFNTLDDALSSFNR---------LLHMHP-PPSIVDFAKLLTSIAK 77

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
               S+ + L  QM   G+ P+V T + +I+       +     +   + + G  PD   
Sbjct: 78  MKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTT 137

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +  L+  L  E  +  AL LF ++ D G +P+++TY T+I G C + +
Sbjct: 138 FTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 185


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 220/407 (54%), Gaps = 5/407 (1%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           Q+   G  PN+ T N ++   C   ++G A S+   +L +G +P+  TF+TLI   C E 
Sbjct: 81  QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEG 140

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           K+ +A  L++ M++    P+++ Y  LI+GL K G       LL +      + DVV+++
Sbjct: 141 KIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYT 200

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           S++D+      V  A   + +M+  G  P++ +Y+ L+  LC          L  Q++  
Sbjct: 201 SIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 260

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
           ++ P ++ +S+++D  CK GK+ +   + D MI+RG++PD V  + L++G      M +A
Sbjct: 261 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEA 320

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           ++ F   VR    P++  + TL++G C++ +    + LF  M      PD  T+  L+ G
Sbjct: 321 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHG 380

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G L  AI LF +M+ RG  PD++TYS ++  L K  ++   + + K +E + + PD
Sbjct: 381 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPD 440

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           I +YN++++ + +   L+AA  LF  L+ +GL P + TYN +I G C
Sbjct: 441 IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLC 487



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 222/419 (52%), Gaps = 5/419 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +  ++++ G  P+  T   +++ LC+ G+IG A  LFD ++  G +PNVVT+ TLIN
Sbjct: 110 AFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 169

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK      A +L   M + +  PD++IY+ +ID L K  ++ E   L    + +G+  
Sbjct: 170 GLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 229

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D+  ++S++ A   + +        ++M+N   LP+V+ +S ++  LC++G++ EA  + 
Sbjct: 230 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 289

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
             ++ R +EP ++TY++L+DG C   ++ +   ++D M+++G  PD +  + LING    
Sbjct: 290 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 349

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             +  A+  F +  R   IP+   +NTLM G C + R  D + LF  M      PD++T+
Sbjct: 350 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTY 409

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           ++L+  +     L  A+ L   +    L PD+  Y+ II G+ +   +     +F  +  
Sbjct: 410 SILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 469

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
            G+ P +  YN++++ L K   L+ A KLF ++      PD  TYNTI  G+   N  L
Sbjct: 470 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETL 528



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/560 (25%), Positives = 267/560 (47%), Gaps = 38/560 (6%)

Query: 21  SESKTHISDLQFNQANAILAN---LIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQS 77
           S++  H   L FN  +  L++   L+  + P   + F K   +     + + ++ +  Q 
Sbjct: 23  SQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM 82

Query: 78  DMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAY 137
           D               FG   N + L            + LI ++  + ++  +  + A 
Sbjct: 83  D--------------SFGVPPNVYTL------------NILINSFCHLNRVGFAFSVLAK 116

Query: 138 MSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGV 193
           +  +G    P     L+  L     +G+   L   M  +GF      Y  L+NGL + G 
Sbjct: 117 ILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 176

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
              A  + R + Q    P++V    I+  LC + Q+  A +LF  ++  G  P++ T+++
Sbjct: 177 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 236

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L++A C   + +    L N M+   ++PD++I+S ++D L K G++ E +E++   + RG
Sbjct: 237 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 296

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++ DVV ++++MD +    ++  AV+ +D M+  GF P+VISY+ LI G C+  ++ +A 
Sbjct: 297 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 356

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            LF ++  +   P   TY++L+ G C  G+L+D  +L+  M+ RG  PD V  S+L++ L
Sbjct: 357 YLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 416

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                + +A+          L P++ ++N ++DG CR         LF  +    + P V
Sbjct: 417 CKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSV 476

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
            T+ ++I G+  +G L+ A  LF +M     +PD  TY+ I  G  +       + + + 
Sbjct: 477 WTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEE 536

Query: 549 MERNGVAPDIAIYNVLLNML 568
           M   G + D++   +L+ ML
Sbjct: 537 MLARGFSADVSTTTLLVEML 556



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 146/295 (49%), Gaps = 5/295 (1%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           +V F+ ++ +   +      +    +M + G  PNV + +ILI   C   R+  A  +  
Sbjct: 56  IVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLA 115

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
           ++L    +P   T+++LI G C  GK+ +   L+D MI  G +P+ V    LINGL    
Sbjct: 116 KILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVG 175

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
               A+R      +    P++ I+ +++D  C+ ++ T+   LF  M    I PD+ T+T
Sbjct: 176 NTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYT 235

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            L+  + +         L  QM+   + PDV+ +S ++  L K   ++    +  +M + 
Sbjct: 236 SLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 295

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           GV PD+  Y  L++    +  +D A+K+F  +  +G  PD+I+Y T+I GYC ++
Sbjct: 296 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIH 350



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 185/420 (44%), Gaps = 67/420 (15%)

Query: 83  ASHVFDKMV------------------IQFGKTYNFFRLFRDSLGDFGCD-----YSFLI 119
           A H+FDKM+                   + G T    RL R S+    C      Y+ +I
Sbjct: 145 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR-SMEQGNCQPDVVIYTSII 203

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG 177
           ++  +  ++ E+  +F+ M   GI  SPD+     L+  L +         L   M    
Sbjct: 204 DSLCKDRQVTEAFNLFSQMVGQGI--SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 261

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                 ++  +++ L ++G +  A  +   +IQRG  P++VT   ++   C+  ++  A 
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 321

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD----------- 282
            +FD+++  G  P+V++++TLIN +CK  K++KA  L+  M   + +PD           
Sbjct: 322 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGL 381

Query: 283 ------------------------LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
                                   L+ YSIL+D L K   L+E   LL       L  D+
Sbjct: 382 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDI 441

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
            V++ ++D     G++  A   +  + + G  P+V +Y+I+I GLC++G L EA  LF +
Sbjct: 442 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 501

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL 438
           +      P   TY+++  GF ++ +      L + M+ RG   D    +LL+  L  D L
Sbjct: 502 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGL 561



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 9/232 (3%)

Query: 384 LEPSLLTYSSLIDGFCKSG----KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM----- 434
           L P L  +SS  + F         L D  S ++ ++     P  V  + L+  +      
Sbjct: 13  LSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHY 72

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
              L    Q     + PN++  N L++  C L R      +   +     +PD  T T L
Sbjct: 73  STVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTL 132

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           IRG+  +G +  A+ LF +M+  G  P+V+TY  +I+GL K  N S  + + + ME+   
Sbjct: 133 IRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNC 192

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            PD+ IY  +++ L K+  +  A  LF Q+  +G+ PDI TY +++   C+L
Sbjct: 193 QPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 244



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 131/272 (48%), Gaps = 8/272 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM----SCLVDSNSVGQY--YK 168
           Y+ L++ +    ++DE+V++F  M   G   +PD++         C +       Y   +
Sbjct: 304 YTTLMDGHCLQSEMDEAVKVFDMMVRKG--FAPDVISYTTLINGYCKIHKIDKAMYLFEE 361

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +CR         Y  LM+GL   G +++A  +  +++ RG +P++VT + +L  LC N  
Sbjct: 362 MCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCH 421

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A +L   +      P++  ++ +I+  C+  +LE A  L++ +    L P +  Y+I
Sbjct: 422 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 481

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I GL K G L E N+L +         D   ++++   ++   +  RA+Q  + ML  G
Sbjct: 482 MIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 541

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           F  +V + ++L++ L   G    +C L   VL
Sbjct: 542 FSADVSTTTLLVEMLSDDGLDQSSCFLMLSVL 573


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 258/513 (50%), Gaps = 15/513 (2%)

Query: 105 RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP----DLVQRLMSCLVDS 160
           RD   D   D +F + +  + G      +  AY + M ++++P        +L++ LV  
Sbjct: 60  RDRHKDASFD-NFAVRDKCKGGSFSNFDDALAYFNQM-VHMNPFPCITQFNQLLAALVRM 117

Query: 161 NSVGQYYKLCRAMR--GKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
                   + R M   G    VY    L+N L    ++   F +  ++ + GF P+I+T 
Sbjct: 118 KHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITF 177

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++  LCI G+I  A    D ++  G +P V T + ++N  CK  K   A      M+E
Sbjct: 178 NTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVE 237

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           +D  P+++ YSI+ID L K   + E  +L       G+   VV ++S++      G   +
Sbjct: 238 LDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQ 297

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A   +  ML     P+V+++SIL+  LC++G ++EA  +FG+++   +EP ++TYSSLI 
Sbjct: 298 ASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIH 357

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIP 451
           G CKS   ++  +L + M+ R ++PD V  S+ ++     G++ +A       +   L P
Sbjct: 358 GVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRP 417

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+  +N+LMDG C   +  +  K+F +M      PDV+++ +LI+G      +  A  LF
Sbjct: 418 NVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLF 477

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M  +GLTP+ IT++ +I GL +         +FK M  +G  PD+  Y+ LL+   K 
Sbjct: 478 DEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKH 537

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +LD AL LF  L    L+P+ +    ++ G C
Sbjct: 538 GHLDEALALFEALKKSQLKPNHVICKILLGGMC 570



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 255/497 (51%), Gaps = 11/497 (2%)

Query: 108 LGDFGCDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ 165
           +  F C   F  L+   VR+   D  V I+  M   G+  S   +  L++CL   + VG 
Sbjct: 98  MNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGL 157

Query: 166 YYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
            + +   +   GF      +  L+NGL  +G I  A      ++ RG+ P + T   I+ 
Sbjct: 158 GFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVN 217

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  G+   A      ++ +  +P VV++S +I++ CK   + +A  L+  M  + + P
Sbjct: 218 GLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISP 277

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
            ++ Y+ LI G+  +G+ K+ + L    L+  +K DVV FS ++DA    G V  A+  +
Sbjct: 278 TVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVF 337

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
            +M+     P++++YS LI G+C+     E+  L  ++L R + P ++T+S  +D FCK 
Sbjct: 338 GKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKK 397

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G + +  S+ + MI+RGL+P+ V  + L++G      M +A + F   V     P++  +
Sbjct: 398 GMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSY 457

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N L+ G C+ +R  +  +LF  M    + P+ ITHT LI G+   G   +A  LF +M  
Sbjct: 458 NILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGS 517

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G  PD+ITYS ++ G  K  ++   L +F+ ++++ + P+  I  +LL  + K   L+ 
Sbjct: 518 HGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLED 577

Query: 577 ALKLFGQLTDRGLEPDI 593
           A +LF  L+   L+PD+
Sbjct: 578 AKELFSSLSIEELQPDV 594



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 35/205 (17%)

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI----------- 484
           DAL +F Q V M   P +  FN L+    R+K     V ++  M  + +           
Sbjct: 87  DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILI 146

Query: 485 ------------------------KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
                                   KP +IT   LI G+  +G +  A+     ++ RG  
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ 206

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P V T++ I++GL K    S  +   K M      P++  Y+++++ L K   ++ A+ L
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDL 266

Query: 581 FGQLTDRGLEPDIITYNTIICGYCS 605
           F  +   G+ P ++TYN++I G C+
Sbjct: 267 FYHMRSIGISPTVVTYNSLIYGMCN 291


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 158/615 (25%), Positives = 275/615 (44%), Gaps = 57/615 (9%)

Query: 47  NPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVIQFGKT----YN 99
           +P   + FF W+   ++ P+    A+L   L  + +   A+ +  +M++          +
Sbjct: 95  HPKLLLDFFYWSRPRIAPPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLAS 154

Query: 100 FFRLFRD------SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
             R  +D      S          L++ Y + G +  + ++   M+D+G+  +      L
Sbjct: 155 IQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGL 214

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGF----------------------------------- 178
           +  L+ ++++   +KL   M G G                                    
Sbjct: 215 LKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDC 274

Query: 179 ----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  +++GL R G +E AF    +++  G  P+  T   ++  LC   ++  A +
Sbjct: 275 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKA 334

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L D +   G KPN+V + TL++ F KE K  +AF +   M+   + P+ I+Y  LI GL 
Sbjct: 335 LLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLC 394

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G+L   ++LL   +  GL+ D   ++ +M  +    D   A +  + M N G LPNV 
Sbjct: 395 KIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVY 454

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           SY I+I GLCQ G   EA  L  +++   L+P+   Y+ LI G  K G +       + M
Sbjct: 455 SYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKM 514

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            K  + PD    + LI GL     M +A  ++ Q  +  L+P+ F ++ L+ G C+    
Sbjct: 515 TKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNL 574

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
               +L   M    +KP+  T+T L+ G            +   ML  G  PD   Y  +
Sbjct: 575 EKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIV 634

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I  L + +N+ V   +   +E+NG+ PD+ IY+ L++ L K  +++ A+ L  ++   GL
Sbjct: 635 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGL 694

Query: 590 EPDIITYNTIICGYC 604
           EP I+ YN +I G+C
Sbjct: 695 EPGIVCYNALIDGFC 709



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 152/536 (28%), Positives = 259/536 (48%), Gaps = 49/536 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I    R G ++E+      M D G  LSPD      LM+ L   + + +   L   
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYG--LSPDAFTYGALMNGLCKGSRLKEAKALLDE 338

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G      VY  L++G +++G    AF + +++I  G  PN +  + +++ LC  GQ
Sbjct: 339 MSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQ 398

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +G AS L   ++ VG +P+  T++ L+    ++   + AF+L N M    ++P++  Y I
Sbjct: 399 LGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGI 458

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+GL + G  KE   LL   +  GLK +  +++ ++  +   G++  A +  ++M    
Sbjct: 459 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN 518

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++  Y+ LIKGL   GR+ EA   + QV  R L P   TYS LI G+CK+G L    
Sbjct: 519 VHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKAD 578

Query: 409 SLYDNMIKRGLKPDAVVCSLLING---------------------------LMGDALRFF 441
            L   M+  GLKP+A   + L+ G                           + G  +R  
Sbjct: 579 QLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNL 638

Query: 442 FQSVRMT-------------LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
            +S  M              L+P+L I+++L+ G C++      V L   M    ++P +
Sbjct: 639 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGI 698

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           + +  LI G    G +S A  +F  +L +GL P+ +TY+A+I G  K  +I+    ++K 
Sbjct: 699 VCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKE 758

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M   G+APD  +YNVL        +L+ AL L  ++ +RG   ++  +NT++ G+C
Sbjct: 759 MLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFC 813



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 207/468 (44%), Gaps = 64/468 (13%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            V + L++   + G + NA  +   +   G  P    CN +LK L     +     L   
Sbjct: 174 AVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGF 233

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G  P+V T+ST I A CK    + A +++  M   D   + + Y+++I GL ++G 
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           ++E                                   A    + M++ G  P+  +Y  
Sbjct: 294 VEE-----------------------------------AFGFKEEMVDYGLSPDAFTYGA 318

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ GLC+  RL EA  L  ++    L+P+++ Y +L+DGF K GK  + F +   MI  G
Sbjct: 319 LMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAG 378

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           ++P+ ++   LI GL     +G A +   + +++ L P+ F +N LM G  +        
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAF 438

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +L   M    I P+V ++ ++I G+   G    A  L  +M+  GL P+   Y+ +I G 
Sbjct: 439 ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 498

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K  NIS+     + M +  V PD+  YN L+  L     ++ A + + Q+  RGL PD 
Sbjct: 499 SKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDE 558

Query: 594 ITYNTIICGYCS--------------LNSC----------LIDGYFKS 617
            TY+ +I GYC               LNS           L++GYFKS
Sbjct: 559 FTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKS 606



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 170/344 (49%), Gaps = 5/344 (1%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           FC Y  L+ GL   G +E A   + QV +RG VP+  T + ++   C  G +  A  L  
Sbjct: 524 FC-YNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLR 582

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L  G KPN  T++ L+  + K    EK   +   M+     PD  IY I+I  L ++ 
Sbjct: 583 QMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 642

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            ++    +L      GL  D+ ++SS++     I D+ +AV   D M   G  P ++ Y+
Sbjct: 643 NMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYN 702

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G C+ G +  A  +F  +L + L P+ +TY++LIDG CK+G + D F LY  M+ R
Sbjct: 703 ALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDR 762

Query: 418 GLKPDAVVCSLLINGL--MGDALRFFFQSVRM--TLIPNLFIFNTLMDGCCRLKRATDTV 473
           G+ PDA V ++L  G     D  +  F +  M      N+ +FNTL+ G C+  +  +T 
Sbjct: 763 GIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETE 822

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           KL  +M    I P+  T   ++      G L  A  +F ++ ++
Sbjct: 823 KLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 153/307 (49%), Gaps = 5/307 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  Y + G ++++ ++   M + G+  + D    L+     SN   +   + ++M 
Sbjct: 561 YSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSML 620

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G G      +Y  ++  L R   +E AF +  +V + G VP++   + ++  LC    + 
Sbjct: 621 GSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADME 680

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L D +   G +P +V ++ LI+ FC+   + +A  +++ ++   LVP+ + Y+ LI
Sbjct: 681 KAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALI 740

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  K G + +  +L    LDRG+  D  V++ +        D+ +A+   + M N G+ 
Sbjct: 741 DGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA 800

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            NV  ++ L+ G C++G+L E   L   ++ R + P+  T   ++  F K+GKL +   +
Sbjct: 801 -NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRV 859

Query: 411 YDNMIKR 417
           +  + ++
Sbjct: 860 FAELQQK 866



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 129/284 (45%), Gaps = 28/284 (9%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLI-----------------------RRLEPS 387
           P+  +++ L   LC      +A GL  Q+++                       R   PS
Sbjct: 113 PSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPS 172

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-GDALRFFFQ--- 443
                 L+D + K+G +R+   +   M   GL P    C+ L+  L+  DA+   ++   
Sbjct: 173 TAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKG 232

Query: 444 -SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                 ++P+++ ++T ++  C+ +      K+F  M   +   + +T+ V+I G+   G
Sbjct: 233 FMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 292

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++  A     +M+  GL+PD  TY A+++GL KG  +     +   M  +G+ P+I +Y 
Sbjct: 293 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYG 352

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            L++  +KE     A  +  ++   G++P+ I Y+ +I G C +
Sbjct: 353 TLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKI 396


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 153/576 (26%), Positives = 284/576 (49%), Gaps = 23/576 (3%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSP-NIAQLIHVLLQSDMRDVASHVFDKMVIQF 94
           N IL    +  +   A+  F+    C  +      LIH L Q    D A  + D+M+   
Sbjct: 63  NTILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQ-- 120

Query: 95  GKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--R 152
                     +D   D    Y+ LI    ++GKID +  +   M +      PD++    
Sbjct: 121 ----------KDCHPDAAV-YNCLIAGLCKMGKIDAARNVLKMMLERSCV--PDVITYTS 167

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+     +N++ +  KL   M+  G       Y  L+NGL ++  +E    +  ++++ G
Sbjct: 168 LIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG 227

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             P+  + N ++  LC +G+   A  + + ++     P+VVT+++L++ FCK +K+++A 
Sbjct: 228 REPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAE 287

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           +L   M+     P +I Y+ LI G  +A RL +   ++      G+  D+V ++ ++D  
Sbjct: 288 RLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGL 347

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G +  A +  + M+     P+V++YSIL+ GLC+ G++ +A  L   +L R  +P+L
Sbjct: 348 CKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNL 407

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT 448
           +T++++IDGFCK+GK+ +G  + + M +    PD V  S LI+G    A R       + 
Sbjct: 408 VTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC-KANRMQDAFAILG 466

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + P+   ++++++G C   +  +  ++  LM      P    + ++I G+        A+
Sbjct: 467 ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEAL 526

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +   M +RG  P++ TYS +I+GL K K +   +++  +M   G  PD+A Y  L++  
Sbjct: 527 KMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGF 586

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            K   +DAA + F  + D G EPD + YN +I G+C
Sbjct: 587 CKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFC 622



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 257/533 (48%), Gaps = 44/533 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           ++ +++ Y +IG +D ++  F       ++ SP       L+  L     + + Y+L   
Sbjct: 62  HNTILKAYCQIGDLDRALSHFRGK----MWCSPTAFTYCILIHGLCQCQRIDEAYQLLDE 117

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  K       VY  L+ GL + G I+ A ++ + +++R  VP+++T   ++   C    
Sbjct: 118 MIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA 177

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L + +   G  P+ V ++ L+N  CK+ +LE+  +L   M+E    PD   Y+ 
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++  L ++G+ +E  ++L   +++    DVV ++S+MD +  +  +  A +  + M+   
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P VI+Y+ LI G  +  RL +A  +   +    + P L+TY+ L+DG CK+GKL +  
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L + M+++   PD V  S+L+NGL     + DA       +     PNL  FNT++DG 
Sbjct: 358 ELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGF 417

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLI---------------------------- 495
           C+  +  +  K+  LM   +  PDV+T++ LI                            
Sbjct: 418 CKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSM 477

Query: 496 -RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
             G+ S G +  A  +   M K+G  P    Y+ II GL   +     L M ++M   G 
Sbjct: 478 LEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGC 537

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            P++  Y++L+N L K   ++ A+ +   + ++G  PD+ TY ++I G+C +N
Sbjct: 538 EPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKIN 590



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 262/553 (47%), Gaps = 55/553 (9%)

Query: 98  YNFFR-LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
           Y+FFR  F D        Y  LI  + R G     +EI   M  +    SPD++    + 
Sbjct: 9   YSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEM--LARRFSPDVITH-NTI 65

Query: 157 LVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
           L     +G   +     RGK +C      Y  L++GL +   I+ A+ +  ++IQ+   P
Sbjct: 66  LKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHP 125

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           +    N ++  LC  G+I  A ++  ++L     P+V+T+++LI   C+   L++A +L 
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M E  L PD + Y+ L++GL K  +L+E ++LL   ++ G + D   +++V+      
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G    A +  ++M+     P+V++Y+ L+ G C+  ++ EA  L   ++ RR  P+++TY
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305

Query: 392 SSLI-----------------------------------DGFCKSGKLRDGFSLYDNMIK 416
           ++LI                                   DG CK+GKL +   L + M++
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           +   PD V  S+L+NGL     + DA       +     PNL  FNT++DG C+  +  +
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             K+  LM   +  PDV+T++ LI G      +  A  +       G++PD  +YS+++ 
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLE 479

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL     +     +  LM + G  P  + Y +++  L      D ALK+   +++RG EP
Sbjct: 480 GLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEP 539

Query: 592 DIITYNTIICGYC 604
           ++ TY+ +I G C
Sbjct: 540 NLYTYSILINGLC 552



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 216/433 (49%), Gaps = 7/433 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+ G  R G  +    +  +++ R F P+++T N ILK  C  G +  A S F   
Sbjct: 26  TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGK 85

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +   P     T+  LI+  C+  ++++A+QL + M++ D  PD  +Y+ LI GL K G++
Sbjct: 86  MWCSP--TAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKI 143

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                +L   L+R    DV+ ++S++        +  A +  ++M   G  P+ ++Y+ L
Sbjct: 144 DAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNAL 203

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GLC+Q +L E   L  +++    EP   +Y++++   C+SGK  +   + + MI++  
Sbjct: 204 LNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKC 263

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V  + L++G      M +A R     V     P +  + TL+ G  R  R  D  +
Sbjct: 264 GPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYR 323

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M    I PD++T+  L+ G+   G L  A  L   M+++   PDV+TYS +++GL 
Sbjct: 324 VMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC 383

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +     + ++M   G  P++  +N +++   K   +D   K+   + +    PD++
Sbjct: 384 KLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVV 443

Query: 595 TYNTIICGYCSLN 607
           TY+T+I GYC  N
Sbjct: 444 TYSTLIDGYCKAN 456



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 230/468 (49%), Gaps = 19/468 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+    +  +++E  ++   M + G    PD      +++CL +S    +  K+   
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAG--REPDTFSYNTVVACLCESGKYEEAGKILEK 257

Query: 173 M----RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M     G     Y  LM+G  +   ++ A  +   ++ R   P ++T   ++       +
Sbjct: 258 MIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR 317

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  + + +   G  P++VT++ L++  CK  KLE+A +L  +M+E D  PD++ YSI
Sbjct: 318 LADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSI 377

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L++GL K G++ +   LL   L+RG + ++V F++++D +   G V    +  + M    
Sbjct: 378 LVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVS 437

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V++YS LI G C+  R+ +A  + G      + P   +YSS+++G C +GK+ +  
Sbjct: 438 CTPDVVTYSTLIDGYCKANRMQDAFAILG------ISPDKASYSSMLEGLCSTGKVEEAQ 491

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM----GD-ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            + D M K+G  P +   +L+I GL     GD AL+           PNL+ ++ L++G 
Sbjct: 492 EVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGL 551

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+ KR  D + +  +M      PDV T+T LI G      + +A   F  M   G  PD 
Sbjct: 552 CKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDK 611

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
           + Y+ +I G  +  N+   + + +LM   G  PD A Y  L+  L  E
Sbjct: 612 LAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 3/241 (1%)

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           R +E    F +      +PS  TY +LI GF ++G  +    + + M+ R   PD +  +
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63

Query: 428 LLINGL--MGDALRFFFQ-SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
            ++     +GD  R       +M   P  F +  L+ G C+ +R  +  +L   M   + 
Sbjct: 64  TILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PD   +  LI G+   G + +A  +   ML+R   PDVITY+++I G  +   +     
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + + M+ +G+ PD   YN LLN L K+  L+   KL  ++ + G EPD  +YNT++   C
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC 243

Query: 605 S 605
            
Sbjct: 244 E 244



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 2/173 (1%)

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +   FF +       P+   +  L+ G  R   +   +++   M      PDVITH  ++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           +     G L  A+  F    K   +P   TY  +IHGL + + I     +   M +    
Sbjct: 67  KAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH 124

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           PD A+YN L+  L K   +DAA  +   + +R   PD+ITY ++I G C  N+
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA 177


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 246/484 (50%), Gaps = 9/484 (1%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNG 187
           +D+++  F  M  M    S     RL++ +  +      + L   M   G     + +N 
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 188 LLRKGVIEN----AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+      N    AF +  ++++ G  P+  T   +++ LC+ G+IG+A  LFD ++  G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNVVT+ TLIN  CK      A +L   M + +  PD+++Y+ +ID L K  ++ E  
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L    + +G+  D+  ++S++ +   + +        ++M+N   +P+V+ +S ++  L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G++ EA  +   ++IR +EP+++TY++L+DG C   ++ +   ++D M+  G  P+ 
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  + LING      M  A   F +  +  LIPN   +NTLM G C + R  D + LF  
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M  +   PD+ T+ +L+  +  +  L  A+ L   +    + PD+  Y+ +I G+ +   
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 467

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F  +   G+ P++  Y +++N L +   LD A KLF ++   G  PD  TYNT
Sbjct: 468 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 527

Query: 599 IICG 602
           I  G
Sbjct: 528 ITQG 531



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 221/429 (51%), Gaps = 5/429 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +  L+  + +       F +  Q+   G  P++ T N ++   C   + G A S+   +L
Sbjct: 70  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL 129

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +G +P+  TF+TLI   C E K+  A  L++ M+     P+++ Y  LI+GL K G   
Sbjct: 130 KLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 189

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               LL +      + DVVV++S++D+      V  A   + +M+  G  P++ +Y+ LI
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 249

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC          L  Q++  ++ P ++ +S+++D  CK GK+ +   + D MI RG++
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 309

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  + L++G      M +A++ F   V     PN+  +NTL++G C+++R      L
Sbjct: 310 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 369

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M    + P+ +T+  L+ G+   G L  AI LF +M+  G  PD+ TY  ++  L K
Sbjct: 370 FEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 429

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
             ++   + + K +E + + PDI IY ++++ + +   L+AA  +F  L+ +GL P++ T
Sbjct: 430 KSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRT 489

Query: 596 YNTIICGYC 604
           Y  +I G C
Sbjct: 490 YTIMINGLC 498



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 260/509 (51%), Gaps = 17/509 (3%)

Query: 87  FDKMVIQFGKTYNFFRLFR-----DSLGDFGCDYSF--LIENYVRIGKIDESVEIFAYMS 139
           F++++    KT  +  +F      DS G     Y+   LI ++  + +   +  + A + 
Sbjct: 70  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL 129

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIE 195
            +G+         L+  L     +G    L   M G+GF      Y  L+NGL + G   
Sbjct: 130 KLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 189

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  + R + Q    P++V    I+  LC + Q+  A +LF  ++  G  P++ T+++LI
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 249

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           ++ C   + +    L N M+   ++PD++I+S ++D L K G++ E ++++   + RG++
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 309

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            +VV ++++MD +    ++  AV+ +D M++ G+ PNVISY+ LI G C+  R+ +A  L
Sbjct: 310 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 369

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F ++  + L P+ +TY++L+ G C  G+L+D  +L+  M+  G  PD     +L++ L  
Sbjct: 370 FEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 429

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              + +A+          + P++ I+  ++DG CR         +F  +    ++P+V T
Sbjct: 430 KSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRT 489

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +T++I G+  +G L  A  LF +M   G +PD  TY+ I  GL + K     + + + M 
Sbjct: 490 YTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 549

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             G + D++   +L+ ML  +  LD ++K
Sbjct: 550 ARGFSADVSTTTLLVEMLCDD-KLDQSVK 577



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 194/416 (46%), Gaps = 40/416 (9%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A S F+ +L + P P+ V F+ L+ +  K  +    F L N M    + PD+   +I
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+      R      +L   L  GL+ D   F++++      G +G A+  +D+M+  G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F PNV++Y  LI GLC+ G    A  L   +     +P ++ Y+S+ID  CK  ++ + F
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL---------------------MGDALRF------- 440
           +L+  M+ +G+ PD    + LI+ L                     M D + F       
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 441 --------FFQSVRMTLI----PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                       V M +I    PN+  +N LMDG C      + VK+F  M      P+V
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           I++  LI G      +  A  LF +M ++ L P+ +TY+ ++HGL     +   + +F  
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M  +G  PD+A Y +LL+ L K+ +LD A+ L   +    ++PDI  Y  +I G C
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMC 463



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 137/270 (50%), Gaps = 5/270 (1%)

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           ++M + G  P+V + +ILI   C   R   A  +  ++L   L+P   T+++LI G C  
Sbjct: 91  NQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVE 150

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           GK+ D   L+D MI  G +P+ V    LINGL        A+R      +    P++ ++
Sbjct: 151 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 210

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            +++D  C+ ++ T+   LF  M    I PD+ T+T LI  + +         L  QM+ 
Sbjct: 211 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMIN 270

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
             + PDV+ +S ++  L K   I+    +  +M   GV P++  YN L++    +  +D 
Sbjct: 271 SKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDE 330

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           A+K+F  +   G  P++I+YNT+I GYC +
Sbjct: 331 AVKVFDTMVHNGYAPNVISYNTLINGYCKI 360



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%)

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D +  F  M   +  P  +    L+  IA      +   L  QM   G+ PDV T + +I
Sbjct: 50  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 109

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +             +   + + G+ PD A +  L+  L  E  +  AL LF ++   G +
Sbjct: 110 NSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 169

Query: 591 PDIITYNTIICGYCSL 606
           P+++TY T+I G C +
Sbjct: 170 PNVVTYGTLINGLCKV 185


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 243/504 (48%), Gaps = 46/504 (9%)

Query: 114 DYSFLIENYVRIGKIDESVEIF-AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           DY+ ++++  R G    ++EIF   M+  G+  +P +V                      
Sbjct: 3   DYNIVLQSLCRAGDTARALEIFRGEMARDGV--APTIV---------------------- 38

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
                   Y  ++NGL +   +     +  ++++RG  P++VT N ++  LC  G +  A
Sbjct: 39  -------TYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEA 91

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM--DLVPDLIIYSILI 290
             L   +   G  PNVVT+S LIN  CK  ++++A +L   M     D++P++I Y+  +
Sbjct: 92  RRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 151

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKL--DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           DGL K     E  EL+ +  D  L++  D V FS+++D     G +  A   +D M+ GG
Sbjct: 152 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGG 211

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           ++PNVI+Y+ L+ GLC+  ++  A  +   ++ + + P ++TYS L+D FCK+ ++ +  
Sbjct: 212 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 271

Query: 409 SLYDNMIKRG-----LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
            L   M  RG     L PD V  ++LI G         A   F + V   L P++  F  
Sbjct: 272 ELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 331

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+DG C+  +      +  LMG   + P+V+T+  L+ G+   G +  A     +M+  G
Sbjct: 332 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 391

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             PD ITY ++++ L +       L +   ++  G  PD   YN+L++ L K    + A+
Sbjct: 392 CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAI 451

Query: 579 KLFGQLTDRGLEPDIITYNTIICG 602
            +  ++  +G +PD  T+     G
Sbjct: 452 TVLEEMVGKGHQPDSFTFAACFSG 475



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 262/511 (51%), Gaps = 33/511 (6%)

Query: 93  QFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G T     +FR  +   G       Y+ +I    +   +   +E+F  + + G +  P
Sbjct: 13  RAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHH--P 70

Query: 148 DLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHM 200
           D+V    L+  L  +  + +  +L   M  +G CV     Y  L+NGL + G I+ A  +
Sbjct: 71  DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRG-CVPNVVTYSVLINGLCKVGRIDEAREL 129

Query: 201 HRQVIQRG--FVPNIVTCNKILKRLCINGQIGNA----SSLFDVLLLVGPKPNVVTFSTL 254
            +++ ++    +PNI+T N  L  LC       A     SL D  L V   P+ VTFSTL
Sbjct: 130 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV--SPDTVTFSTL 187

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I+  CK  ++++A  +++ M+    VP++I Y+ L++GL KA +++  + ++ + +D+G+
Sbjct: 188 IDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGV 247

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV-----ISYSILIKGLCQQGRL 369
             DV+ +S ++DA+     V  A++    M + G  PNV     ++++ILI G C+ G  
Sbjct: 248 TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNF 307

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  LF +++ + L+P ++T+ +LIDG CK+G++     + D M   G+ P+ V  + L
Sbjct: 308 EQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNAL 367

Query: 430 INGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           ++GL     + +A +F  + V    +P+   + +L+   CR  R  D ++L   +  +  
Sbjct: 368 VHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW 427

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PD +T+ +L+ G+   G    AI +  +M+ +G  PD  T++A   GL +  N++  + 
Sbjct: 428 DPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTME 487

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           + +++   G+ PD    + +L+ + +   LD
Sbjct: 488 LLRVVLAKGMLPDATTCSSILDWVCRSGKLD 518



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 201/403 (49%), Gaps = 15/403 (3%)

Query: 217 NKILKRLCINGQIGNASSLF-DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
           N +L+ LC  G    A  +F   +   G  P +VT++T+IN  CK   L    +L+  ++
Sbjct: 5   NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           E    PD++ Y+ LID L KAG L+E   L      RG   +VV +S +++    +G + 
Sbjct: 65  ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124

Query: 336 RAVQTYDRMLNGG--FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR--RLEPSLLTY 391
            A +    M       LPN+I+Y+  + GLC+Q    EAC L   +     R+ P  +T+
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 184

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
           S+LIDG CK G++ +  S++D+MI  G  P+ +  + L+NGL     M  A       V 
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV-----ITHTVLIRGIASQ 501
             + P++  ++ L+D  C+  R  + ++L   M      P+V     +T  +LI G    
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKA 304

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G+   A  LF +M+ + L PDV+T+ A+I GL K   +     +  LM   GV P++  Y
Sbjct: 305 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 364

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N L++ L K   ++ A +   ++   G  PD ITY +++   C
Sbjct: 365 NALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC 407



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 156/302 (51%), Gaps = 15/302 (4%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTY-DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           V  ++ V+ +    GD  RA++ +   M   G  P +++Y+ +I GLC+   L     LF
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG- 435
            +++ R   P ++TY++LID  CK+G L +   L+ +M  RG  P+ V  S+LINGL   
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 436 ---DALRFFFQSV---RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPD 487
              D  R   Q +      ++PN+  +N+ +DG C+     +  +L   +  G   + PD
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            +T + LI G+   G +  A  +F  M+  G  P+VITY+A+++GL K   +     M +
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG-----LEPDIITYNTIICG 602
            M   GV PD+  Y+VL++   K   +D AL+L   +  RG     L PD +T+N +I G
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 603 YC 604
            C
Sbjct: 301 AC 302



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 196/410 (47%), Gaps = 53/410 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS LI    ++G+IDE+ E+   M+     + P+++     +  L   +   +  +L R+
Sbjct: 110 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 169

Query: 173 MRGKGFCV------YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           +R     V      +  L++GL + G I+ A  +   +I  G+VPN++T N ++  LC  
Sbjct: 170 LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 229

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL---------------- 270
            ++  A ++ + ++  G  P+V+T+S L++AFCK +++++A +L                
Sbjct: 230 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVP 289

Query: 271 ------------------------YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
                                   +  M+  +L PD++ +  LIDGL KAG+++   ++L
Sbjct: 290 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
               + G+  +VV +++++      G +  A Q  + M++ G +P+ I+Y  L+  LC+ 
Sbjct: 350 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
            R  +A  L  ++     +P  +TY+ L+DG  KSGK     ++ + M+ +G +PD+   
Sbjct: 410 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 469

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           +   +GL     +   +      +   ++P+    ++++D  CR  +  D
Sbjct: 470 AACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 72/120 (60%), Gaps = 1/120 (0%)

Query: 488 VITHTVLIRGIASQGSLSSAILLFF-QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           V  + ++++ +   G  + A+ +F  +M + G+ P ++TY+ II+GL K  ++  G+ +F
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + +   G  PD+  YN L++ L K  +L+ A +L G ++ RG  P+++TY+ +I G C +
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120



 Score = 42.4 bits (98), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 558 IAIYNVLLNMLIKECNLDAALKLF-GQLTDRGLEPDIITYNTIICGYCSLN 607
           +A YN++L  L +  +   AL++F G++   G+ P I+TYNTII G C  N
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN 51


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 233/430 (54%), Gaps = 6/430 (1%)

Query: 177 GFCVYEFLMNGLLR-KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           G   Y  +++ ++R K  ++ A  + +++++ G  PN+ T N +++  C  G +      
Sbjct: 166 GVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXF 225

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F  +   G  PNVVT++T+I+A+CK  K+ +AF+L  LM    L P+LI Y+++I+GL +
Sbjct: 226 FGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCR 285

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G++KE +E+L     R    D V F+++++ Y  +G+  +A+  +  M+  G  PNV++
Sbjct: 286 EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVT 345

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI  +C+ G L  A     Q+  R L P+  TY++LIDGF + G L+  + +   M+
Sbjct: 346 YTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405

Query: 416 KRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G  P  +  + LIN     G M DA     + +    IP++  ++T++ G CR +   
Sbjct: 406 ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELE 465

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              +L + M    I PDV T++ LI+G+  Q  L     LF +ML  GL PD +TY+++I
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLI 525

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +      ++   L +   M + G +PDI  YNVL+N   K+     A +L  +L      
Sbjct: 526 NAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV 585

Query: 591 PDIITYNTII 600
           P+ ITYNT+I
Sbjct: 586 PNEITYNTLI 595



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 253/504 (50%), Gaps = 30/504 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ Y ++ KI E+ ++   M+  G  L+P+L+    +++ L     + +  ++   
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKG--LNPNLISYNVVINGLCREGQMKETSEILEE 298

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  + +      +  L+NG    G    A  +H ++++ G  PN+VT   ++  +C  G 
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A    D +   G  PN  T++TLI+ F ++  L++A+Q+   M+E    P +I Y+ 
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+G    GR+++ + LL   ++RG   DVV +S+++  +    ++ +A Q    M+  G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V +YS LI+GLC+Q RL E C LF ++L   L P  +TY+SLI+ +C  G L    
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D MI++G  PD V  ++LING        +A R   + +    +PN   +NTL+D C
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598

Query: 464 CRL--KRATDTVKLFMLMGMYNIKPDVI-------------THTVLIRGIASQGSLSSAI 508
             L  K A   +K F + G+ N    V+              + V+I G +  G++  A 
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLF-KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
            L+ +ML  G  P  +T  A+   L+ +GK + +   +     ++    + A+  VL+ +
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELN-QLLDYTLKSCRITEAALAKVLIGI 717

Query: 568 LIKECNLDAALKLFGQLTDRGLEP 591
             KE N+DA   +   +   GL P
Sbjct: 718 NSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 154/298 (51%), Gaps = 6/298 (2%)

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE-AC 373
           K    VF  V+ +   +  + +A+   +   + GF+P V+SY+ ++  + +  + V+ A 
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           G+F +++   + P++ TY+ LI GFC +G L  G   +  M + G  P+ V  + +I+  
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                +G+A +         L PNL  +N +++G CR  +  +T ++   M      PD 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T   LI G  + G+   A++L  +M+K GL+P+V+TY+ +I+ + K  N++  +     
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           M   G+ P+   Y  L++   ++  L  A ++  ++ + G  P IITYN +I G+C L
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 262/497 (52%), Gaps = 13/497 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS ++    + GK+ E+ ++F  M+  G+   P++V    ++  L  + +V +   + R 
Sbjct: 214 YSTVVHGLFKEGKVGEACDLFHEMTQQGV--PPNVVTYNSVIHALCKARAVDKAQGILRQ 271

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G G       Y  L++G    G  + A  M +++  RG +PN VTC+  +  LC +G+
Sbjct: 272 MVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGR 331

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A   FD +L  G K N++++STL++ +     L     L+NLM+   +VP+  +++I
Sbjct: 332 IEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNI 391

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L++G  K G ++E   +      RGL  DV+ + +V+ A+  +G +  A+  ++ M++ G
Sbjct: 392 LVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG 451

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN   Y  LI+G C  G LV+A  L  ++  + L P +L+++SLI+  CK G++ +  
Sbjct: 452 VEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQ 511

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            ++D +I+ G K D  + + LI+G      M +A R     V + + P++  + TL++GC
Sbjct: 512 RIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGC 571

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  R  D + LF  +    +KP   T+ +++ G+   G  ++A  +F +M++ G+   +
Sbjct: 572 CKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTI 631

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TYS ++ GL +       + +F+ +    V  DI I N++++ + K    + A  LF  
Sbjct: 632 PTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFAS 691

Query: 584 LTDRGLEPDIITYNTII 600
           + D GL P + TY  ++
Sbjct: 692 IPDYGLVPTVQTYTIMM 708



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 253/508 (49%), Gaps = 17/508 (3%)

Query: 116 SFLIENYVRIGKIDESVEI-FAYMSDMGIYLSPDLVQR---LMSCLVDSNSVGQYYKLCR 171
           S L+       + DE+V++ F  M ++G    PD +     L S   D  S      L  
Sbjct: 142 SSLLRGLCDAKRTDEAVDVLFHRMPELGCV--PDAISYSTVLKSVCDDGRSQWALDILRM 199

Query: 172 AMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           A++  G C     VY  +++GL ++G +  A  +  ++ Q+G  PN+VT N ++  LC  
Sbjct: 200 AVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKA 259

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
             +  A  +   ++  G +P+ VT++TLI+ +    + ++A +++  M    ++P+ +  
Sbjct: 260 RAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTC 319

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           S  +  L K GR++E  E   + L +G KL+++ +S+++  Y   G +      ++ M+ 
Sbjct: 320 STFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVR 379

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G +PN   ++IL+ G  + G + EA  +F  +  R L P +LTY ++I  FC+ G + D
Sbjct: 380 DGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDD 439

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMD 461
               +++MI +G++P+  V   LI G    GD   A    ++     L P +  F +L++
Sbjct: 440 AMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLIN 499

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C+  R  +  ++F ++     K DV   T LI G    G +S A  +   M+  G+ P
Sbjct: 500 HLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEP 559

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D++TY  +++G  K   I  GL +F+ +   GV P    Y ++L+ L       AA ++F
Sbjct: 560 DIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMF 619

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSC 609
            ++ + G+   I TY+ ++ G C  N+C
Sbjct: 620 QEMIESGIAVTIPTYSILLTGLCR-NNC 646



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 197/378 (52%), Gaps = 17/378 (4%)

Query: 242 VGPK---PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
            GP+   P V T+S LI+  C+  +L+ AF  +  ++   +  D+I+ S L+ GL  A R
Sbjct: 94  TGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKR 153

Query: 299 LKEGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYD--RML--NGGFLP-N 352
             E  ++L   +   G   D + +S+V+ +   + D GR+    D  RM    GG  P N
Sbjct: 154 TDEAVDVLFHRMPELGCVPDAISYSTVLKS---VCDDGRSQWALDILRMAVKQGGGCPCN 210

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V+ YS ++ GL ++G++ EAC LF ++  + + P+++TY+S+I   CK+  +     +  
Sbjct: 211 VVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILR 270

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M+  G++PD V  + LI+G         A+R F +     +IPN    +T +   C+  
Sbjct: 271 QMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHG 330

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  +  + F  M     K ++I+++ L+ G A+ G L     LF  M++ G+ P+   ++
Sbjct: 331 RIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFN 390

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +++G  K   +   + +F+ M++ G+ PD+  Y  +++   +  ++D A+  F  + D+
Sbjct: 391 ILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK 450

Query: 588 GLEPDIITYNTIICGYCS 605
           G+EP+   Y  +I G+C+
Sbjct: 451 GVEPNFAVYQCLIQGFCT 468



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 174/378 (46%), Gaps = 44/378 (11%)

Query: 99  NFFRLF-RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS-- 155
           N F L  RD +      ++ L+  Y + G + E++ IF  M   G  L+PD++  L    
Sbjct: 372 NLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG--LNPDVLTYLAVIH 429

Query: 156 --CLVDS--NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
             C + S  +++ ++  +        F VY+ L+ G    G +  A  +  ++  +G  P
Sbjct: 430 AFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGP 489

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
            I++   ++  LC  G++  A  +FD+++  G K +V  F++LI+ +C   K+ +AF+++
Sbjct: 490 CILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVH 549

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           + M+ + + PD++ Y  L++G  K GR+ +G  L    L +G+K     +  ++D     
Sbjct: 550 DAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHA 609

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG------------------------ 367
           G    A + +  M+  G    + +YSIL+ GLC+                          
Sbjct: 610 GRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVIL 669

Query: 368 -----------RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
                      R  EA GLF  +    L P++ TY+ +++   K G + +   ++  M+K
Sbjct: 670 NIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLK 729

Query: 417 RGLKPDAVVCSLLINGLM 434
            GL P +   ++++  L+
Sbjct: 730 SGLSPTSHFINVIVRTLL 747



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 39/300 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI+ Y  IGK+ E+  +   M  +GI   PD+V                        
Sbjct: 529 FTSLIDGYCLIGKMSEAFRVHDAMVSVGI--EPDIV------------------------ 562

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+NG  + G I++   + R+++ +G  P   T   IL  L   G+   A  
Sbjct: 563 -----TYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKE 617

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  ++  G    + T+S L+   C+    E+A  ++  +  M++  D++I +I+I  +F
Sbjct: 618 MFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMF 677

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           KA R +E   L  +  D GL   V  ++ +M+  +  G V  A   +  ML  G  P   
Sbjct: 678 KARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSH 737

Query: 355 SYSILIKGLCQQGRLVEA----CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
             +++++ L ++G +V+A    C + G+ ++   E S  T S L+  F   GK R+  +L
Sbjct: 738 FINVIVRTLLEKGEIVKAGIYMCRVDGKSIL--FEAS--TASMLLSLFSCKGKHREHLNL 793


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 163/588 (27%), Positives = 284/588 (48%), Gaps = 39/588 (6%)

Query: 38  ILANLIKT---NNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQF 94
           +L NLI+T    +P P+I              IA LIH L+QS     A  +  +++ + 
Sbjct: 84  LLPNLIQTIASTSPNPSI--------------IATLIHFLVQSKKLPEAQSLLLRIIRKS 129

Query: 95  GKTYNFFRLFRDSLGDFGCD----------YSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
           G ++       DSL                +  LI  YV+  K+ E  E F  +   G  
Sbjct: 130 GVSH---VEVIDSLISTSSSNLNSNQNVVVFDLLIRTYVQARKLREGSEAFQLLRKRGFC 186

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHM 200
           +S +    L+  +V    V   +K+       G  V  +    ++N L + G ++N    
Sbjct: 187 VSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVY 246

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             ++ ++G   ++VT N ++   C  G +  A  L D +   G KP + T++ LIN  CK
Sbjct: 247 LSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCK 306

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
           E   E+A ++ + M+ + L P+   ++ ++    +   + E   +    L RG+  D++ 
Sbjct: 307 EGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLIS 366

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           FSS++  +   G++GRA+  +++M   G +P+ + Y+ILI G C+   +  A  +  +++
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 426

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
            R     ++TY++L++G C+   L D   L+  M++RG+ PD    + LI+G      M 
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
            AL  F      +L P++  +NTLMDG C++       +L+  M    I P  I+ ++LI
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G  S G +S A  L+ +M ++G+ P ++T + II G  +  N+S        M   GV 
Sbjct: 547 NGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVP 606

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           PD   YN L+N  +KE N D A  L   + +RGL P+++TYN I+ G+
Sbjct: 607 PDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGF 654



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 151/565 (26%), Positives = 271/565 (47%), Gaps = 36/565 (6%)

Query: 44  KTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRL 103
           K    + A Q  +    CVS      L+  +++    D+A  V++  V + G   N + L
Sbjct: 169 KLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV-KSGNIVNVYTL 227

Query: 104 FRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
                       + ++    + GK+D      + M + G+Y        L++       V
Sbjct: 228 ------------NIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275

Query: 164 GQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            + + L   M GKG       Y  L+NGL ++G  E A  +  +++  G  PN  T N +
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPM 335

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           L   C    +  A  +F+ +L  G  P++++FS+++  F +  +L +A   +  M  + L
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGL 395

Query: 280 VPDLIIYSILIDGLFK----AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           VPD +IY+ILI+G  +    +G LK  NE++    +RG  +DVV ++++++       + 
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMV----ERGCVMDVVTYNTLLNGLCRGKMLD 451

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A + +  M+  G  P+  + + LI G C+ G + +A  LF  + +R L+P ++TY++L+
Sbjct: 452 DADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLM 511

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLI 450
           DGFCK G++     L+ +MI R + P  +  S+LING     L+ +A R + +     + 
Sbjct: 512 DGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIK 571

Query: 451 PNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
           P L   NT++ G  R   L +A D +   +  G   + PD IT+  LI     + +   A
Sbjct: 572 PTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG---VPPDCITYNTLINSFVKEENFDRA 628

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             L   M +RGL P+++TY+AI+ G  +   +     +   M   G+ PD + Y  L+N 
Sbjct: 629 FFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLING 688

Query: 568 LIKECNLDAALKLFGQLTDRGLEPD 592
            + + N+  A ++  ++  RG  PD
Sbjct: 689 YVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 202/423 (47%), Gaps = 45/423 (10%)

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
           LR+G    AF + R+   RGF  +I  CN +L  +   G +  A  +++  +  G   NV
Sbjct: 170 LREG--SEAFQLLRK---RGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNV 224

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
            T + ++NA C                                   K G+L      L  
Sbjct: 225 YTLNIMVNALC-----------------------------------KDGKLDNVGVYLSE 249

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
             ++G+  D+V ++++++AY   G V  A    D M   G  P + +Y+ LI GLC++G 
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGS 309

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
              A  +  ++L   L P+  T++ ++   C+   + +   +++ M++RG+ PD +  S 
Sbjct: 310 YERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369

Query: 429 LI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           ++     NG +G AL +F +   + L+P+  I+  L++G CR    +  +K+   M    
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
              DV+T+  L+ G+     L  A  LF +M++RG+ PD  T + +IHG  K  N++  L
Sbjct: 430 CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKAL 489

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +F+ M    + PD+  YN L++   K   ++ A +L+  +  R + P  I+++ +I G+
Sbjct: 490 SLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGF 549

Query: 604 CSL 606
           CSL
Sbjct: 550 CSL 552



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 180/364 (49%), Gaps = 40/364 (10%)

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           ++++ +LI    +A +L+EG+E       RG  + +   ++++ A V +G V  A + Y+
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
             +  G + NV + +I++  LC+ G+L        ++  + +   L+TY++L++ +C+ G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFN 457
            + + F L D M  +GLKP     + LINGL  +     A R   + + + L PN   FN
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT--------------------------- 490
            ++   CR +   +  ++F  M    + PD+I+                           
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 491 --------HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
                   +T+LI G      +S A+ +  +M++RG   DV+TY+ +++GL +GK +   
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +FK M   GV PD      L++   K+ N+  AL LF  +T R L+PD++TYNT++ G
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513

Query: 603 YCSL 606
           +C +
Sbjct: 514 FCKV 517



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           +F+ L+    + ++  +  + F L+        +     L+  I   G +  A  ++   
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 515 LKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           +K G   +V T + +++ L K GK  +VG+++ + ME  GV  D+  YN L+N   +   
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSE-MEEKGVYADLVTYNTLVNAYCRRGL 274

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +  A  L   +  +GL+P + TYN +I G C   S
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGS 309


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/462 (31%), Positives = 241/462 (52%), Gaps = 22/462 (4%)

Query: 163 VGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
           V  Y+K+  A+    F     L    +       AF +   + +RGF  N+   N +LK 
Sbjct: 62  VSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKG 121

Query: 223 LCINGQIGNASSLF-------DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            C +GQ   A SLF       D ++     P+ VT++TL+N FCK  +L +A  L+  M 
Sbjct: 122 FCRSGQCDKAMSLFSQMKRNYDCVV-----PDCVTYNTLVNGFCKAKRLAEARVLFEAMK 176

Query: 276 EM-DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +  D  P+L+ YS+LID   K+G + EG  LL      GLK DV V+SS++ A+ G GD+
Sbjct: 177 KGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDI 236

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
               + +D ML     PNV++YS L++GL + GR  EA  +   +  R + P ++ Y+ L
Sbjct: 237 ETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVL 296

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
            DG CK+G+  D   + D M+++G +P  +  ++++NGL     M DA       V+   
Sbjct: 297 ADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGK 356

Query: 450 IPNLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
            P+   +NTL+ G C   ++  A D  KL +L   +++KPDV T   LI+G+  +G +  
Sbjct: 357 KPDAVTYNTLLKGLCGAGKIHEAMDLWKL-LLSEKFHVKPDVFTCNNLIQGLCKEGRVHD 415

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +   M++ GL  +++TY+ +I G    + +   L ++K    +G +P+   Y+V++N
Sbjct: 416 AARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMIN 475

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            L K   L  A  LF ++ D G+ P +I YN ++   C  +S
Sbjct: 476 GLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDS 517



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/594 (24%), Positives = 280/594 (47%), Gaps = 38/594 (6%)

Query: 21  SESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMR 80
           S S  H      + A ++    I  +  +P            S P  + LI  L ++   
Sbjct: 10  SSSIAHTQPHSLSDAVSLFHRTIDNDPTSPP-----------SEPACSTLIDNLRKARQY 58

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
           D    V+ KMV                L  F    S L E++V       +  + + M+ 
Sbjct: 59  DAVVSVYHKMVSAL------------VLPRF-TSLSALTESFVNTHHPSFAFSVLSLMTK 105

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV------YEFLMNGLLRKGVI 194
            G  ++   +  ++     S    +   L   M+    CV      Y  L+NG  +   +
Sbjct: 106 RGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRL 165

Query: 195 ENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
             A  +   + + G   PN+VT + ++   C +G++G    L + +   G K +V  +S+
Sbjct: 166 AEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSS 225

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI+AFC E  +E   +L++ M+   + P+++ YS L+ GL + GR +E +E+L     RG
Sbjct: 226 LISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARG 285

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++ DVV ++ + D     G  G A++  D M+  G  P  ++Y++++ GLC++ R+ +A 
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAF 345

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI--KRGLKPDAVVCSLLIN 431
           G+   ++ +  +P  +TY++L+ G C +GK+ +   L+  ++  K  +KPD   C+ LI 
Sbjct: 346 GVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQ 405

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           GL     + DA R     V M L  N+  +N L++G    ++  + +KL+         P
Sbjct: 406 GLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSP 465

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           + +T++V+I G+     LS A  LF +M   G+ P VI Y+A++  L +  ++     +F
Sbjct: 466 NSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLF 525

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           + M       D+  +N++++  +K  ++ +A +L  ++    L PD +T++ +I
Sbjct: 526 QEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILI 579



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 248/506 (49%), Gaps = 14/506 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ L+  + +  ++ E+  +F  M   G    P+LV    L+ C   S  VG+   L   
Sbjct: 152 YNTLVNGFCKAKRLAEARVLFEAMKKGG-DCRPNLVTYSVLIDCYCKSGEVGEGLGLLEE 210

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G      VY  L++    +G IE    +  ++++R   PN+VT + +++ L   G+
Sbjct: 211 MEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGR 270

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              AS +   +   G +P+VV ++ L +  CK  +   A ++ +LM++    P  + Y++
Sbjct: 271 WREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNV 330

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +++GL K  R+ +   ++   + +G K D V +++++    G G +  A+  +  +L+  
Sbjct: 331 VVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEK 390

Query: 349 F--LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
           F   P+V + + LI+GLC++GR+ +A  +   ++   L+ +++TY+ LI+G+  + KL +
Sbjct: 391 FHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIE 450

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL----MGDALRFFFQSVRMTLI-PNLFIFNTLMD 461
              L+   ++ G  P+++  S++INGL    M    R  F  ++ + I P +  +N LM 
Sbjct: 451 ALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMT 510

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             CR         LF  M   N   DV++  ++I G    G + SA  L  +M    L P
Sbjct: 511 SLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVP 570

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D +T+S +I+   K   +   + +++ M   G  P + +++ LL     +   +  + L 
Sbjct: 571 DAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLL 630

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLN 607
            Q+ D+ +  D    +TI+   C ++
Sbjct: 631 HQMADKDVVLDSKLTSTILACLCHMS 656



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/425 (23%), Positives = 188/425 (44%), Gaps = 50/425 (11%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCL 157
           F  + R  +      YS L++   R G+  E+ E+   M+  G+   PD+V    L   L
Sbjct: 243 FDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGV--RPDVVAYTVLADGL 300

Query: 158 VDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRG----- 208
             +   G   K+   M  KG       Y  ++NGL ++  +++AF +   ++++G     
Sbjct: 301 CKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDA 360

Query: 209 --------------------------------FVPNIVTCNKILKRLCINGQIGNASSLF 236
                                             P++ TCN +++ LC  G++ +A+ + 
Sbjct: 361 VTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIH 420

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             ++ +G + N+VT++ LI  +    KL +A +L+   +E    P+ + YS++I+GL K 
Sbjct: 421 SSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKM 480

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
             L     L     D G++  V+ ++++M +      + +A   +  M N     +V+S+
Sbjct: 481 QMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSF 540

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           +I+I G  + G +  A  L  ++ +  L P  +T+S LI+ F K G L +   LY+ M+ 
Sbjct: 541 NIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVS 600

Query: 417 RGLKPDAVVCSLLIN--GLMGDA---LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G  P  VV   L+   GL G+    +    Q     ++ +  + +T++   C + R  D
Sbjct: 601 CGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLD 660

Query: 472 TVKLF 476
             K+ 
Sbjct: 661 VEKIL 665



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 8/262 (3%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  + S LI  L +  +      ++ +++   + P   + S+L + F  +      FS+
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM--TLIPNLFIFNTLMDGC 463
              M KRG   +    +L++ G         A+  F Q  R    ++P+   +NTL++G 
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 464 CRLKRATDTVKLFMLMGM-YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           C+ KR  +   LF  M    + +P+++T++VLI      G +   + L  +M + GL  D
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V  YS++I       +I  G  +F  M R  V+P++  Y+ L+  L +      A ++  
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
            +T RG+ PD++ Y  +  G C
Sbjct: 280 DMTARGVRPDVVAYTVLADGLC 301



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 5/176 (2%)

Query: 434 MGDALRFFFQSVR--MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           + DA+  F +++    T  P+    +TL+D   + ++    V ++  M    + P   + 
Sbjct: 21  LSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSL 80

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           + L     +    S A  +   M KRG   +V   + ++ G  +       + +F  M+R
Sbjct: 81  SALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKR 140

Query: 552 N--GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG-LEPDIITYNTIICGYC 604
           N   V PD   YN L+N   K   L  A  LF  +   G   P+++TY+ +I  YC
Sbjct: 141 NYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYC 196


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 243/480 (50%), Gaps = 10/480 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +I    R G I+++  +F  M  +G+  +  +   L+   V      +  ++ + M  KG
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  ++ GL +   +E A     ++I+RG  PN+ T   ++   C +G++  A 
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVAD 571

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             F  +L  G  PN V  + LI+ +CKE    +A  ++  M+   + PD+  YS LI GL
Sbjct: 572 RYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGL 631

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G+L+   ELL   L++GL  DV  ++S++  +   G +G+A Q ++ M   G  PN+
Sbjct: 632 LRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNI 691

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           I+Y+ LI GLC+ G +  A  LF  +  + L  + +TY+++IDG+CKSG L   F L+D 
Sbjct: 692 ITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDE 751

Query: 414 MIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M  +G+ PD+ V S LI+G   +     AL  F +SV+        + N LMDG C+  +
Sbjct: 752 MTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGFCKSGK 810

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +  +L   M   ++KPD +T+T+LI      G L  A   F  M KR L P+ +TY+A
Sbjct: 811 VIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTA 870

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++ G       S    +F  M    + PD   ++V+++  +KE +    LKL   +  +G
Sbjct: 871 LLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKG 930



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 248/502 (49%), Gaps = 39/502 (7%)

Query: 112 GCDYSFLIENYV-----RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           GC  S +  N V     R G++DE+ E+   M   G+         L+          + 
Sbjct: 266 GCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEA 325

Query: 167 YKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
             +   M  KG       Y  L++G +R+G    AF +  +++ RG   N+ T N ++K 
Sbjct: 326 KLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKG 385

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           +C  G +  A +L + +++VG KP+  T++ +I  + KE    +   L + M + +LVP 
Sbjct: 386 VCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPT 445

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
                ++I+GL + G +++ + +    +  G+K + V++++++  +V  G    AV+   
Sbjct: 446 AYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILK 505

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M   G  P+V+ Y+ +I GLC+  ++ EA     +++ R L+P++ TY +LI G+CKSG
Sbjct: 506 VMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSG 565

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           +++     +  M+  G+ P+ VVC+ LI                              DG
Sbjct: 566 EMQVADRYFKEMLGCGIAPNDVVCTALI------------------------------DG 595

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+    T+   +F  M   ++ PDV T++ LI G+   G L  A+ L  + L++GL PD
Sbjct: 596 YCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPD 655

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TY++II G  K   I     + + M + G++P+I  YN L+N L K   ++ A +LF 
Sbjct: 656 VFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFD 715

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
            +  +GL  + +TY TII GYC
Sbjct: 716 GIPGKGLAHNAVTYATIIDGYC 737



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 236/501 (47%), Gaps = 77/501 (15%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC-----------INGQ 228
           V+E L++G  +KG+ + A        + GFV  ++ CN +L  L             NG 
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227

Query: 229 IGNASSLFDVLLLV-------------------------GPKPNVVTFSTLINAFCKEAK 263
           +  A+ L DV                             G  P++VT++ +I   C+  +
Sbjct: 228 L-EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +++AF+L  LM +  LV D+  YSILIDG  K  R  E   +L     +GLK   V +++
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D ++  GD G A +  + ML  G   N+ +Y+ L+KG+C+ G + +A  L  ++++  
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           ++P   TY+++I+G+ K         L   M K  L P A  C ++INGL     + DA 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           R F   V + + PN  I+ TL+ G  +  R  + V++  +M    ++PDV+ +  +I G+
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA--- 555
                +  A     +M++RGL P+V TY A+IHG  K   + V    FK M   G+A   
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586

Query: 556 --------------------------------PDIAIYNVLLNMLIKECNLDAALKLFGQ 583
                                           PD+  Y+ L++ L++   L  A++L  +
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSE 646

Query: 584 LTDRGLEPDIITYNTIICGYC 604
             ++GL PD+ TYN+II G+C
Sbjct: 647 FLEKGLVPDVFTYNSIISGFC 667



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 252/512 (49%), Gaps = 10/512 (1%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            +F   L      Y+ LI+ ++R G   E+  +   M   G+ L+      L+  +    
Sbjct: 331 EMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFG 390

Query: 162 SVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            + +   L   M   G       Y  ++ G L++        +  ++ +   VP   TC 
Sbjct: 391 DMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCG 450

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            I+  LC +G I +AS +F++++ +G KPN V ++TLI    +E + ++A ++  +M + 
Sbjct: 451 MIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKK 510

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + PD++ Y+ +I GL K+ +++E  + L+  ++RGLK +V  + +++  Y   G++  A
Sbjct: 511 GVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVA 570

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            + +  ML  G  PN +  + LI G C++G   EA  +F  +L R + P + TYS+LI G
Sbjct: 571 DRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHG 630

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
             ++GKL+    L    +++GL PD    + +I+G      +G A +      +  + PN
Sbjct: 631 LLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPN 690

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  +N L++G C+        +LF  +    +  + +T+  +I G    G+LS A  LF 
Sbjct: 691 IITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFD 750

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M  +G+ PD   YSA+I G  K  N    L +F    + G A   ++ N L++   K  
Sbjct: 751 EMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGFCKSG 809

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +  A +L   + D+ ++PD +TY  +I  +C
Sbjct: 810 KVIEANQLLEDMVDKHVKPDHVTYTILIDYHC 841



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 137/532 (25%), Positives = 250/532 (46%), Gaps = 49/532 (9%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
            Y+ LI+ +V+ G+  E+V I   M   G+   PD++    ++  L  S  + +       
Sbjct: 484  YTTLIKGHVQEGRFQEAVRILKVMDKKGV--QPDVLCYNSVIIGLCKSRKMEEAKDYLVE 541

Query: 173  MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            M  +G       Y  L++G  + G ++ A    ++++  G  PN V C  ++   C  G 
Sbjct: 542  MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601

Query: 229  IGNASSLFDVLL--LVGPK---------------------------------PNVVTFST 253
               A+S+F  +L   V P                                  P+V T+++
Sbjct: 602  TTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNS 661

Query: 254  LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
            +I+ FCK+  + KAFQL+  M +  + P++I Y+ LI+GL KAG ++   EL      +G
Sbjct: 662  IISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKG 721

Query: 314  LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            L  + V +++++D Y   G++ +A + +D M   G  P+   YS LI G  ++G   +A 
Sbjct: 722  LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKAL 781

Query: 374  GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
             LF +  +++   S  + ++L+DGFCKSGK+ +   L ++M+ + +KPD V  ++LI+  
Sbjct: 782  SLFLES-VQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYH 840

Query: 432  ---GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
               G + +A +FF    +  L+PN   +  L+ G     R ++   LF  M   +I+PD 
Sbjct: 841  CKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDG 900

Query: 489  ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
            +T +V+I     +G     + L   MLK+G          +I  L + +++S  L + + 
Sbjct: 901  VTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEK 960

Query: 549  MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            +E  G+   +A  + L+    K   +D A ++   +      PD    N +I
Sbjct: 961  IEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 223/453 (49%), Gaps = 34/453 (7%)

Query: 102  RLFRDSLG------DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRL 153
            R F++ LG      D  C  + LI+ Y + G   E+  IF  M  +G  + PD+     L
Sbjct: 572  RYFKEMLGCGIAPNDVVC--TALIDGYCKEGSTTEATSIFRCM--LGRSVHPDVRTYSAL 627

Query: 154  MSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
            +  L+ +  +    +L      KG       Y  +++G  ++G I  AF +H  + Q+G 
Sbjct: 628  IHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGI 687

Query: 210  VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
             PNI+T N ++  LC  G+I  A  LFD +   G   N VT++T+I+ +CK   L KAF+
Sbjct: 688  SPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFR 747

Query: 270  LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
            L++ M    + PD  +YS LIDG  K G  ++   L L ++ +G        +++MD + 
Sbjct: 748  LFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFA-STSSLNALMDGFC 806

Query: 330  GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
              G V  A Q  + M++    P+ ++Y+ILI   C+ G L EA   F  +  R L P+ L
Sbjct: 807  KSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNAL 866

Query: 390  TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GDALRFFFQSVRM 447
            TY++L+ G+  +G+  + F+L+D MI + ++PD V  S++I+  +  GD ++       +
Sbjct: 867  TYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVK------TL 920

Query: 448  TLIPNLF---------IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             L+ ++          + + L+D  CR +  ++ +K+   +    +   + T + L+R  
Sbjct: 921  KLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCF 980

Query: 499  ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
               G +  A  +   M++    PD    + +I+
Sbjct: 981  HKAGKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 103/267 (38%), Gaps = 45/267 (16%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GF   + S+SIL   LC       A  +  Q+++     S   YS ++D   KS K  D 
Sbjct: 96  GFSQKLQSFSILALILCNSRLFSRADSVVNQMIMM----SSGGYSEILDSLIKSCKEFD- 150

Query: 408 FSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            +  +           VV  LLI+G     L  +A+ FF  + R   +  L   N L+  
Sbjct: 151 LNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSD 210

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +        KL +    YN                              ML+  +  D
Sbjct: 211 LLKAN------KLELFWRFYN-----------------------------GMLEANVLHD 235

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TY+ +I+  F+  N   G  +   ME  G +P +  YNV++  L +   +D A +L  
Sbjct: 236 VYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKK 295

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSC 609
            +  +GL  D+ TY+ +I G+     C
Sbjct: 296 LMDKKGLVADVFTYSILIDGFGKQKRC 322


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 229/422 (54%), Gaps = 8/422 (1%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L+R G +E       ++I +G +P+++ C  +++  C +G+   A+ + ++L   G  P+
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V+T++ LI  +CK  +++KA Q+   +  M + PD++ Y+ ++  L  +G+LKE  E+L 
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLD 233

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             + R    DV+ ++ +++A      VG+A++  D M   G  P+V++Y++LI G+C++G
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           RL EA      + +   +P+++T++ ++   C +G+  D   L  +M+++G  P  V  +
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 428 LLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +LIN      L+G A+    +  +   +PN   +N L+ G C+ K+    ++   +M   
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
              PD++T+  L+  +   G   +A+ +  Q+  +G +P +ITY+ +I GL K       
Sbjct: 414 GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 473

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             + + M R G+ PDI  Y+ LL  L  E  +D A+K+F  +    ++P  +TYN I+ G
Sbjct: 474 AELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 533

Query: 603 YC 604
            C
Sbjct: 534 LC 535



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 197/393 (50%), Gaps = 10/393 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            Y  L+ G  + G I+ A     QV++R    P++VT N IL+ LC +G++  A  + D 
Sbjct: 179 TYNVLIGGYCKSGEIDKAL----QVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDR 234

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
            +     P+V+T++ LI A C ++ + +A +L + M +    PD++ Y++LI+G+ K GR
Sbjct: 235 QMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGR 294

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L E  + L      G + +V+  + ++ +    G    A +    ML  G  P+V++++I
Sbjct: 295 LDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNI 354

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI  LC++  L  A  +  ++      P+ L+Y+ L+ GFC+  K+       + M+ RG
Sbjct: 355 LINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 414

Query: 419 LKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             PD V  + L+  L  D     A+    Q       P L  +NT++DG  ++ +     
Sbjct: 415 CYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAA 474

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +L   M    +KPD+IT++ L+RG+  +G +  AI +F  M    + P  +TY+AI+ GL
Sbjct: 475 ELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 534

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
            K +  S  +     M   G  P  A Y +L+ 
Sbjct: 535 CKAQQTSRAIDFLAYMVEKGCKPTKATYTILIE 567



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 169/360 (46%), Gaps = 43/360 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ ++ +    GK+ E++E+         Y  PD++    L+    + + VGQ  KL   
Sbjct: 212 YNTILRSLCDSGKLKEAMEVLDRQMQRECY--PDVITYTILIEATCNDSGVGQAMKLLDE 269

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR KG       Y  L+NG+ ++G ++ A      +   G  PN++T N IL+ +C  G+
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLIN-------------------------------- 256
             +A  L   +L  G  P+VVTF+ LIN                                
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNP 389

Query: 257 ---AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
               FC+E K+++A +   +M+     PD++ Y+ L+  L K G+     E+L     +G
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
               ++ +++V+D    +G    A +  + M   G  P++I+YS L++GL  +G++ EA 
Sbjct: 450 CSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAI 509

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +F  +    ++PS +TY++++ G CK+ +          M+++G KP     ++LI G+
Sbjct: 510 KIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 153/305 (50%), Gaps = 15/305 (4%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPDLVQR--LMSCL 157
           D +   GC      Y+ LI    + G++DE+++   ++++M +Y   P+++    ++  +
Sbjct: 268 DEMRKKGCKPDVVTYNVLINGICKEGRLDEAIK---FLNNMPLYGCQPNVITHNIILRSM 324

Query: 158 VDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
             +       +L   M  KG       +  L+N L RK ++  A  +  ++ + G +PN 
Sbjct: 325 CSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           ++ N +L   C   ++  A    ++++  G  P++VT++TL+ A CK+ K + A ++ N 
Sbjct: 385 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQ 444

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           +      P LI Y+ +IDGL K G+ +   ELL     +GLK D++ +S+++      G 
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           V  A++ +  M      P+ ++Y+ ++ GLC+  +   A      ++ +  +P+  TY+ 
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564

Query: 394 LIDGF 398
           LI+G 
Sbjct: 565 LIEGI 569



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 8/211 (3%)

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLF 454
           ++G+L +G    + MI +G  PD + C+ LI G         A R          +P++ 
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +N L+ G C+   + +  K   ++   ++ PDV+T+  ++R +   G L  A+ +  + 
Sbjct: 179 TYNVLIGGYCK---SGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           ++R   PDVITY+ +I        +   + +   M + G  PD+  YNVL+N + KE  L
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           D A+K    +   G +P++IT+N I+   CS
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCS 326



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 8/261 (3%)

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +NG       + +I ++ L + G L E      +++ +   P ++  +SLI GFC+SGK 
Sbjct: 99  VNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKT 158

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           R    + + +   G  PD +  ++LI G    G+  +      RM++ P++  +NT++  
Sbjct: 159 RKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRS 218

Query: 463 CC---RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
            C   +LK A + +   M    Y   PDVIT+T+LI    +   +  A+ L  +M K+G 
Sbjct: 219 LCDSGKLKEAMEVLDRQMQRECY---PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGC 275

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PDV+TY+ +I+G+ K   +   +     M   G  P++  +N++L  +        A +
Sbjct: 276 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAER 335

Query: 580 LFGQLTDRGLEPDIITYNTII 600
           L   +  +G  P ++T+N +I
Sbjct: 336 LLADMLRKGCSPSVVTFNILI 356



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 39/233 (16%)

Query: 106 DSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           + +   GC      Y+ L+  + +  K+D ++E    M   G Y  PD+V          
Sbjct: 373 EKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY--PDIV---------- 420

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
                               Y  L+  L + G  + A  +  Q+  +G  P ++T N ++
Sbjct: 421 -------------------TYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVI 461

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             L   G+   A+ L + +   G KP+++T+STL+     E K+++A ++++ M  + + 
Sbjct: 462 DGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIK 521

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           P  + Y+ ++ GL KA +     + L   +++G K     ++ +++   GI D
Sbjct: 522 PSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIE---GIAD 571


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 233/430 (54%), Gaps = 6/430 (1%)

Query: 177 GFCVYEFLMNGLLR-KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           G   Y  +++ ++R K  ++ A  + +++++ G  PN+ T N +++  C  G +      
Sbjct: 166 GVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFF 225

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F  +   G  PNVVT++T+I+A+CK  K+ +AF+L  LM    L P+LI Y+++I+GL +
Sbjct: 226 FGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCR 285

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G++KE +E+L     R    D V F+++++ Y  +G+  +A+  +  M+  G  PNV++
Sbjct: 286 EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVT 345

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI  +C+ G L  A     Q+  R L P+  TY++LIDGF + G L+  + +   M+
Sbjct: 346 YTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405

Query: 416 KRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G  P  +  + LIN     G M DA     + +    IP++  ++T++ G CR +   
Sbjct: 406 ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELE 465

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              +L + M    I PDV T++ LI+G+  Q  L     LF +ML  GL PD +TY+++I
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLI 525

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +      ++   L +   M + G +PDI  YNVL+N   K+     A +L  +L      
Sbjct: 526 NAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV 585

Query: 591 PDIITYNTII 600
           P+ ITYNT+I
Sbjct: 586 PNEITYNTLI 595



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 253/504 (50%), Gaps = 30/504 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ Y ++ KI E+ ++   M+  G  L+P+L+    +++ L     + +  ++   
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKG--LNPNLISYNVVINGLCREGQMKETSEILEE 298

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  + +      +  L+NG    G    A  +H ++++ G  PN+VT   ++  +C  G 
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A    D +   G  PN  T++TLI+ F ++  L++A+Q+   M+E    P +I Y+ 
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+G    GR+++ + LL   ++RG   DVV +S+++  +    ++ +A Q    M+  G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V +YS LI+GLC+Q RL E C LF ++L   L P  +TY+SLI+ +C  G L    
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D MI++G  PD V  ++LING        +A R   + +    +PN   +NTL+D C
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598

Query: 464 CRL--KRATDTVKLFMLMGMYNIKPDVI-------------THTVLIRGIASQGSLSSAI 508
             L  K A   +K F + G+ N    V+              + V+I G +  G++  A 
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLF-KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
            L+ +ML  G  P  +T  A+   L+ +GK + +   +     ++    + A+  VL+ +
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELN-QLLDYTLKSCRITEAALAKVLIGI 717

Query: 568 LIKECNLDAALKLFGQLTDRGLEP 591
             KE N+DA   +   +   GL P
Sbjct: 718 NSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 154/298 (51%), Gaps = 6/298 (2%)

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE-AC 373
           K    VF  V+ +   +  + +A+   +   + GF+P V+SY+ ++  + +  + V+ A 
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           G+F +++   + P++ TY+ LI GFC +G L  G   +  M + G  P+ V  + +I+  
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                +G+A +         L PNL  +N +++G CR  +  +T ++   M      PD 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T   LI G  + G+   A++L  +M+K GL+P+V+TY+ +I+ + K  N++  +     
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           M   G+ P+   Y  L++   ++  L  A ++  ++ + G  P IITYN +I G+C L
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/523 (28%), Positives = 267/523 (51%), Gaps = 39/523 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDS------------ 160
           YS LI+      +I E+  +F  M  +G    PD +    LM  L  +            
Sbjct: 229 YSTLIKGLCMKHRISEATRLFMSMQKLGC--RPDAIAYGTLMKGLCQTGNINTALQLHQE 286

Query: 161 --NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
             N  G+Y   C+         Y  +++GL +    + A  + +++  +G +P++++   
Sbjct: 287 MLNDTGRYGIKCKPT----LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTT 342

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++   C++G+   A  LF+ +L VG +P+V T S LI+  CK+ K+ +A +L  ++++  
Sbjct: 343 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 402

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
            +PD++  + L+ GL    R+ +  +L L     G   +VV  +++M      G++  A+
Sbjct: 403 CIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL 462

Query: 339 QTYDRMLNG------GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           + +  ML+          PN ISYSI+I GLC+ GR  EA  LF ++    + P +++Y+
Sbjct: 463 ELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYT 522

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRM 447
           SLI GFC+SGK +D   L++ M+  G++PD    S+LI+     G + +A       ++ 
Sbjct: 523 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 582

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
             IPN   + TL+ G C   R ++  +LFM M      PDV+T+  L++G+   G++ +A
Sbjct: 583 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 642

Query: 508 ILLFFQMLK------RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           + L  +ML           PDVI+YS II GL K         +FK M+  GV P++  Y
Sbjct: 643 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISY 702

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             L++   +   L+ A  LF ++ D+G++ + +TY+ +I G+C
Sbjct: 703 TSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFC 745



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 261/517 (50%), Gaps = 27/517 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + R GK +++  +F  M D+GI         L+  L     V +  +L   M 
Sbjct: 159 YTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMI 218

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L+ GL  K  I  A  +   + + G  P+ +    ++K LC  G I 
Sbjct: 219 QRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNIN 278

Query: 231 NASSLFDVLL------LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
            A  L   +L       +  KP ++++S +I+  CK+ + ++A +L+  M    ++PD+I
Sbjct: 279 TALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVI 338

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ LI G   +G+ ++   L    LD G++ DV   S ++D     G V  A +  + +
Sbjct: 339 SYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 398

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +  G +P+V++ + L+KGLC + R+ +A  LF ++      P+++T ++L+ G C+SG +
Sbjct: 399 IQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNI 458

Query: 405 RDGFSLYDNMIKR------GLKPDAVVCSLLINGLMG----DALRFFFQSVR-MTLIPNL 453
           +    L+ NM+          KP+A+  S++I+GL      D  R  F+ ++ + +IP++
Sbjct: 459 KIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDV 518

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             + +L+ G CR  +  D   LF  M    ++PDV T +VLI  +  +G +  A  L   
Sbjct: 519 ISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 578

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M++RG  P+ +TY+ ++ GL     IS    +F  M++ G  PD+  Y  L+  L +  N
Sbjct: 579 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGN 638

Query: 574 LDAALKLFGQ-LTDRG-----LEPDIITYNTIICGYC 604
           +  AL+L  + L+D G      +PD+I+Y+ II G C
Sbjct: 639 IKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLC 675



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 167/645 (25%), Positives = 285/645 (44%), Gaps = 119/645 (18%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVR 124
           ++HV +Q D+    S V   M  + GK      L  + +   GC      YS LI+    
Sbjct: 1   MLHVGIQPDV--TTSGVLIDMFCKEGKVIEANELL-EVMVQRGCILDIVTYSTLIKGLCM 57

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDS--------------NSVGQYYK 168
             +I E+ ++F  M  +G    PD +    LM  L  +              N   QY  
Sbjct: 58  KHRISEATQLFMSMKKLGC--RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGI 115

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            C+         Y  +++GL +    + A  + +++  +G +P++++   ++   C +G+
Sbjct: 116 KCKPT----LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGK 171

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  LF+ +L VG + +V T S LI+  CKE K+ +A +L  +M++   + D++ YS 
Sbjct: 172 WEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST 231

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG- 347
           LI GL    R+ E   L ++    G + D + + ++M      G++  A+Q +  MLN  
Sbjct: 232 LIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDT 291

Query: 348 ----------------------------------------GFLPNVISYSILIKGLCQQG 367
                                                   G +P+VISY+ LI G C  G
Sbjct: 292 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSG 351

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           +  +A  LF ++L   ++P + T S LID  CK GK+ +   L + +I+RG  PD V C+
Sbjct: 352 KWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCT 411

Query: 428 LLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--- 479
            L+ GL     +  A + F +  ++  +PN+    TLM G C+       ++L   M   
Sbjct: 412 TLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 471

Query: 480 ----GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
               G+ N KP+ I+++++I G+   G    A  LF +M   G+ PDVI+Y+++IHG  +
Sbjct: 472 TSPYGI-NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 530

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE------------------------ 571
                   ++F  M   GV PD+  ++VL++ML KE                        
Sbjct: 531 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 590

Query: 572 --------C---NLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
                   C    +  A +LF ++   G  PD++TY T++ G C 
Sbjct: 591 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 635



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 223/451 (49%), Gaps = 42/451 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  +   GK +++  +F  M D+GI   PD+     L+  L     V +  KL   
Sbjct: 340 YTTLIHGFCLSGKWEKAKCLFNEMLDVGI--QPDVTTSSVLIDMLCKKGKVIEANKLLEV 397

Query: 173 MRGKGFCVYEF-----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           +  +G C+ +      L+ GL  K  I  A  +  ++ + G +PN+VTC  ++K LC +G
Sbjct: 398 VIQRG-CIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 456

Query: 228 QIGNASSLFDVLLL------VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            I  A  L   +L       +  KPN +++S +I+  CK  + ++A +L+  M  + ++P
Sbjct: 457 NIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP 516

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+I Y+ LI G  ++G+ K+   L    +D G++ DV  FS ++D     G V  A +  
Sbjct: 517 DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELL 576

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + M+  G +PN ++Y+ L+KGLC   R+ EA  LF ++      P ++TY +L+ G C++
Sbjct: 577 EVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQT 636

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
           G ++    L+  M+                G  G   +           P++  ++ ++D
Sbjct: 637 GNIKTALELHKKMLSD-------------TGQYGTNFK-----------PDVISYSIIID 672

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+  R  +  +LF  M    + P+VI++T LI G    G L  A  LF +M+ +G+  
Sbjct: 673 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQL 732

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           + +TYS +IHG  K   I   L  F+ ME N
Sbjct: 733 NAVTYSVMIHGFCKEGQIDKAL--FQKMEAN 761


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 247/531 (46%), Gaps = 44/531 (8%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L++ Y + G +  + ++   M D+G+  +      L+  L+ ++++   +KL   M G G
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240

Query: 178 F---------------------------------------CVYEFLMNGLLRKGVIENAF 198
                                                     Y  +++GL R G +E AF
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
               +++  G  P+  T   ++  LC  G++  A +L D +   G KPNVV ++TL++ F
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGF 360

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
            KE K  +AF + N M+   + P+ I+Y  LI GL K G+L   ++LL   +  G + D 
Sbjct: 361 MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT 420

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
             +  +M  +    D   A +  + M N G LPN  +Y I+I GLCQ G   EA  L  +
Sbjct: 421 FTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEE 480

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----- 433
           ++   L+P+   Y+ LI G  K G +       +NM K  + PD    + LI GL     
Sbjct: 481 MISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGR 540

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + +A  ++ Q  +  L+P+ F ++ L+ G C+ +      +L   M    +KP+  T+T 
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTD 600

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L+ G            +   ML  G  PD   Y  +I  L + +N+ V   +   +E+NG
Sbjct: 601 LLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 660

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + PD+ IY+ L++ L K  +++ A+ L  ++   GLEP I+ YN +I G+C
Sbjct: 661 LVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 711



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 253/536 (47%), Gaps = 49/536 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I    R G ++E+      M D G  LSPD      LM+ L     + +   L   
Sbjct: 283 YNVMISGLCRSGAVEEAFGFKEEMVDYG--LSPDAFTYGALMNGLCKGGRLKEAKALLDE 340

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G      VY  L++G +++G    AF +  ++I  G  PN +  + +++ LC  GQ
Sbjct: 341 MSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQ 400

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +G AS L + ++ VG +P+  T+  L+    +    + AF+L N M    ++P+   Y I
Sbjct: 401 LGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGI 460

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+GL + G  KE   LL   +  GLK +  +++ ++  +   G +  A ++ + M    
Sbjct: 461 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKAN 520

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP++  Y+ LIKGL   GR+ EA   + QV  R L P   TYS LI G+CK+  L    
Sbjct: 521 VLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKAD 580

Query: 409 SLYDNMIKRGLKPDAVVCSLLING---------------------------LMGDALRFF 441
            L   M+  GLKP+A   + L+ G                           + G  +R  
Sbjct: 581 QLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNL 640

Query: 442 FQSVRMT-------------LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
            +S  M              L+P+L I+++L+ G C++      V L   M    ++P +
Sbjct: 641 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGI 700

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           + +  LI G    G +S A  +F  +L +GL P+ +TY+A+I G  K  +I+    ++K 
Sbjct: 701 VCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKD 760

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M   G+APD  +YNVL        +L+ AL L  ++ +RG    +  ++T++ G+C
Sbjct: 761 MLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-AHVSLFSTLVRGFC 815



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 202/443 (45%), Gaps = 16/443 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V + L++   + G +  A  +   +   G  P    CN +LK L     +     L   +
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFM 236

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+V T+ST + A CK    + A +++  M   D   + + Y+++I GL ++G +
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E        +D GL  D   + ++M+     G +  A    D M   G  PNV+ Y+ L
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G  ++G+  EA  +  +++   ++P+ + Y +LI G CK G+L     L + MIK G 
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD      L+ G         A     +     ++PN + +  +++G C+   + +   
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGN 476

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M    +KP+   +  LI G + +G +S A      M K  + PD+  Y+++I GL 
Sbjct: 477 LLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLS 536

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               I      +  +++ G+ PD   Y+ L++   K  NL+ A +L  Q+ + GL+P+  
Sbjct: 537 TVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNAD 596

Query: 595 TYNTIICGYCSLNSCLIDGYFKS 617
           TY             L++GYFKS
Sbjct: 597 TYTD-----------LLEGYFKS 608



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 176/368 (47%), Gaps = 25/368 (6%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           FC Y  L+ GL   G IE A   + QV +RG VP+  T + ++   C    +  A  L  
Sbjct: 526 FC-YNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQ 584

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L  G KPN  T++ L+  + K    EK   +   M+     PD  IY I+I  L ++ 
Sbjct: 585 QMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 644

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            ++    +L      GL  D+ ++SS++     + D+ +AV   D M   G  P ++ Y+
Sbjct: 645 NMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYN 704

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G C+ G +  A  +F  +L + L P+ +TY++LIDG CK+G + D F LY +M+ R
Sbjct: 705 ALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDR 764

Query: 418 GLKPDAVVCSLLINGL--MGDALRFFFQSVRM--TLIPNLFIFNTLMDGCCRLKRATDTV 473
           G+ PDA V ++L  G     D  +  F +  M      ++ +F+TL+ G C+  R  +T 
Sbjct: 765 GIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETE 824

Query: 474 KLFMLMGMYNIKPDVIT-----------------HTV---LIRGIASQGSLSSAILLFFQ 513
           KL  +M    I P+  T                 H V   L +  ASQ S     LLF  
Sbjct: 825 KLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFTD 884

Query: 514 MLKRGLTP 521
           M+ +GL P
Sbjct: 885 MINKGLIP 892



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 160/331 (48%), Gaps = 25/331 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  Y +   ++++ ++   M + G+  + D    L+     SN   +   + ++M 
Sbjct: 563 YSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSML 622

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G G      +Y  ++  L R   +E AF +  +V + G VP++   + ++  LC    + 
Sbjct: 623 GSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADME 682

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L D +   G +P +V ++ LI+ FC+   + +A  +++ ++   L+P+ + Y+ LI
Sbjct: 683 KAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALI 742

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  K G + +  +L    LDRG+  D  V++ +        D+ +A+   + M N G+ 
Sbjct: 743 DGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA 802

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL------ 404
            +V  +S L++G C++GRL E   L   ++ R + P+  T  ++I  F K+GKL      
Sbjct: 803 -HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRV 861

Query: 405 -------------RDGFS-LYDNMIKRGLKP 421
                         D FS L+ +MI +GL P
Sbjct: 862 FAELQQKKASQSSTDRFSLLFTDMINKGLIP 892



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 159/375 (42%), Gaps = 71/375 (18%)

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
           L D  C Y+ LI+    +G+I+E+ E +A +   G  L PD                   
Sbjct: 522 LPDLFC-YNSLIKGLSTVGRIEEAEEYYAQVQKRG--LVPDEF----------------- 561

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                        Y  L++G  +   +E A  + +Q++  G  PN  T   +L+    + 
Sbjct: 562 ------------TYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSN 609

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
                SS+   +L  G KP+   +  +I    +   +E AF +   + +  LVPDL IYS
Sbjct: 610 DHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYS 669

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL K   +++   LL      GL+  +V +++++D +   GD+ RA   +D +L  
Sbjct: 670 SLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAK 729

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY---------------- 391
           G LPN ++Y+ LI G C+ G + +A  L+  +L R + P    Y                
Sbjct: 730 GLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQA 789

Query: 392 ------------------SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
                             S+L+ GFCK G+L++   L   M+ R + P+A     +I   
Sbjct: 790 LFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEF 849

Query: 432 ---GLMGDALRFFFQ 443
              G + +A R F +
Sbjct: 850 GKAGKLCEAHRVFAE 864


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 150/570 (26%), Positives = 282/570 (49%), Gaps = 47/570 (8%)

Query: 52   IQFFKWTHNCVSSPNIAQL---IHVLLQSDMRDVA----SHVFDKMVIQFGKTY-NFFRL 103
            + FF W  +   S N+  L   IH+ + S    VA    S  +++  +   +++  FF L
Sbjct: 528  LDFFDWARSRRDS-NLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTESFVQFFDL 586

Query: 104  FRDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
               +  D+G D   +    +  V  G + E+ ++F  M + G+ LS D      SC V  
Sbjct: 587  LVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVD------SCNV-- 638

Query: 161  NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
              + +  K C                          A  + R+  + G   N+ + N ++
Sbjct: 639  -YLARLSKDCNK---------------------TATAIIVFREFPEVGVCWNVASYNIVI 676

Query: 221  KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
              +C  G+I  A  L  ++ L G  P+V+++ST+IN +C+  +L+K ++L   M +  L 
Sbjct: 677  HFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLK 736

Query: 281  PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
            P+   Y  +I  L +  +L E  E     + +G+  D +V+++++D +   GD+  A + 
Sbjct: 737  PNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKF 796

Query: 341  YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
            +  M +    P+V++Y+ +I G CQ G +VEA  LF ++L R LEP ++T++ L++G+CK
Sbjct: 797  FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCK 856

Query: 401  SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
            +G ++D F ++++MI+ G  P+ V  + LI+GL     +  A     +  ++ L PN+F 
Sbjct: 857  AGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 916

Query: 456  FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
            +N++++G C+     + VKL        +  D +T+T L+      G +  A  +  +ML
Sbjct: 917  YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEML 976

Query: 516  KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             +GL P ++T++ +++G      +  G  +   M   G+AP+   +N L+       NL 
Sbjct: 977  GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLK 1036

Query: 576  AALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            AA  ++  +  RG+EPD  TY  ++ G+C+
Sbjct: 1037 AATAIYKDMCSRGVEPDGKTYENLVKGHCN 1066



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 214/435 (49%), Gaps = 32/435 (7%)

Query: 180  VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN-GQIGNASSLFDV 238
            V++     L+  G++  A  +  +++  G V ++ +CN  L RL  +  +   A  +F  
Sbjct: 600  VFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFRE 659

Query: 239  LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
               VG   NV +++ +I+  C+  ++ +A  L  LM      PD+I YS +I+G  + G 
Sbjct: 660  FPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGE 719

Query: 299  LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            L +  +L+     +GLK +   + S++     I  +  A + +  M+  G LP+ I Y+ 
Sbjct: 720  LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779

Query: 359  LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            L+ G C++G +  A   F ++  R + P +LTY+++I GFC+ G + +   L+  M+ RG
Sbjct: 780  LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839

Query: 419  LKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            L+PD +                               F  LM+G C+     D  ++   
Sbjct: 840  LEPDIIT------------------------------FTELMNGYCKAGHIKDAFRVHNH 869

Query: 479  MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
            M      P+V+T+T LI G+  +G L SA  L  +M K GL P++ TY++I++GL K  N
Sbjct: 870  MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 929

Query: 539  ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
            I   + +    E  G+  D   Y  L++   K   +D A ++  ++  +GL+P I+T+N 
Sbjct: 930  IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNV 989

Query: 599  IICGYCSLNSCLIDG 613
            ++ G+C L+  L DG
Sbjct: 990  LMNGFC-LHGMLEDG 1003



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 208/432 (48%), Gaps = 9/432 (2%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            YS +I  Y R G++D+  ++   M   G+  +      ++  L     + +  +    M 
Sbjct: 707  YSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMI 766

Query: 175  GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            G+G      VY  L++G  ++G I  A     ++  R   P+++T   I+   C  G + 
Sbjct: 767  GQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 826

Query: 231  NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
             A  LF  +L  G +P+++TF+ L+N +CK   ++ AF+++N M++    P+++ Y+ LI
Sbjct: 827  EAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLI 886

Query: 291  DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            DGL K G L   NELL      GL+ ++  ++S+++     G++  AV+        G  
Sbjct: 887  DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 946

Query: 351  PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
             + ++Y+ L+   C+ G + +A  +  ++L + L+P+++T++ L++GFC  G L DG  L
Sbjct: 947  ADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1006

Query: 411  YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
             + M+ +G+ P+A   + L+        +  A   +       + P+   +  L+ G C 
Sbjct: 1007 LNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCN 1066

Query: 466  LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +   +   LF  M        V T++VLI+G   +     A  +F QM + GL  D   
Sbjct: 1067 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEI 1126

Query: 526  YSAIIHGLFKGK 537
            +       +KGK
Sbjct: 1127 FDFFSDTKYKGK 1138


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 263/514 (51%), Gaps = 32/514 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPDLV--QRLMSCLVDSNSVGQYYKLCR 171
           Y+ +I+ Y ++ + DE+   F ++  MG+  L P+L+    +++ L     + +  ++  
Sbjct: 21  YNTMIDGYCKLKRTDEA---FGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLV 77

Query: 172 AMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M  KG+      Y  L+NG  ++G    A  +H ++++ G  PN+VT   ++  +C  G
Sbjct: 78  EMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAG 137

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            +  A   FD + + G  PN  T++T+IN F ++  L++A+++ N M     +P ++ Y+
Sbjct: 138 NLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYN 197

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI+G    GR++E   LL   + +G+  DVV +S+++  +    ++ RA Q    M+  
Sbjct: 198 ALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGK 257

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
             LP+ ++YS LI+GLC+Q RL EAC +F ++L  +L P   TY++LI+ +CK G L   
Sbjct: 258 SVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKA 317

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+D MI++G  PDAV  ++LINGL       +A R   +      IP+   +NTL++ 
Sbjct: 318 LHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIEN 377

Query: 463 CCRL--KRATDTVKLFMLMGMY-------------NIKPDVITHTVLIRGIASQGSLSSA 507
           CC +  K A   VK F + G+              N KP+   + V+I G    G++  A
Sbjct: 378 CCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKA 437

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLF-KGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
             L+ +M+     P  +T  A++  LF +G +  +   +  ++ R+    D  +  VL+ 
Sbjct: 438 YKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDIL-RSCKLTDAELSKVLVE 496

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +  KE N+D    L  ++   GL P   T    I
Sbjct: 497 INQKEGNMDMVFNLLTEMAKDGLIPSTGTPTNAI 530



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 218/432 (50%), Gaps = 26/432 (6%)

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           +++ + G +PN+VT N ++   C   +   A      + L G +PN++TF+ +IN  C++
Sbjct: 7   KEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRD 66

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            +L++  ++   M     VPD + Y+ L++G  K G   +   L    +  GL  +VV +
Sbjct: 67  GRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTY 126

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +S++++    G++ RA++ +D+M   G  PN  +Y+ +I G  QQG L EA  +  ++  
Sbjct: 127 TSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTR 186

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL--R 439
               PS++TY++LI+G C  G++ +   L  +M+ +G+ PD V  S +I+G   +    R
Sbjct: 187 SGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDR 246

Query: 440 FFFQSVRM---TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
            F   V M   +++P+   +++L+ G C  +R T+   +F  M    + PD  T+T LI 
Sbjct: 247 AFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLIN 306

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
               +G L+ A+ L  +M+++G  PD +TY+ +I+GL K         +   +  +   P
Sbjct: 307 AYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIP 366

Query: 557 DIAIYNVLLNMLIKECN------------------LDAALKLFGQLTDRGLEPDIITYNT 598
               YN L+      CN                  +D A ++F  + ++  +P+   YN 
Sbjct: 367 SAVTYNTLIENC---CNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNV 423

Query: 599 IICGYCSLNSCL 610
           II G+C + + L
Sbjct: 424 IIHGHCRIGNVL 435



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 144/270 (53%), Gaps = 5/270 (1%)

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           +  M   G LPNV++Y+ +I G C+  R  EA G    + ++ LEP+L+T++ +I+G C+
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFI 455
            G+L++   +   M ++G  PD V  + L+NG   +     AL    + VR  L PN+  
Sbjct: 66  DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           + +L++  C+       ++ F  M +  + P+  T+T +I G A QG L  A  +  +M 
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           + G  P ++TY+A+I+G      +   + + + M   GV PD+  Y+ +++   +   LD
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELD 245

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            A ++  ++  + + PD +TY+++I G C 
Sbjct: 246 RAFQMKVEMIGKSVLPDAVTYSSLIQGLCE 275



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 96/169 (56%)

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
            LRFF +  R   +PN+  +NT++DG C+LKR  +       MG+  ++P++IT  ++I 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+   G L     +  +M ++G  PD +TY+ +++G  K  N    L +   M RNG++P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           ++  Y  L+N + K  NL+ A++ F Q+  RGL P+  TY TII G+  
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQ 170



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%)

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +GL  FK MERNG  P++  YN +++   K    D A      +  +GLEP++IT+N II
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 601 CGYC 604
            G C
Sbjct: 61  NGLC 64


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 228/422 (54%), Gaps = 8/422 (1%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L+R G +E  F     ++ RG +P+I+ C  +++ LC  G+   A+ + ++L   G  P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V+T++ LI+ +CK  ++  A QL +    M + PD++ Y+ ++  L  +G+LKE  E+L 
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLD---RMSVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             + R    DV+ ++ +++A      VG+A++  D M + G  P+V++Y++LI G+C++G
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           RL EA      +     +P+++T++ ++   C +G+  D       MI++G  P  V  +
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 428 LLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +LIN     GL+G A+    +  +    PN   +N L+   C+ K+    ++   +M   
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
              PD++T+  L+  +   G +  A+ +  Q+  +G +P +ITY+ +I GL K       
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           + +   M+  G+ PDI  Y+ L+  L +E  +D A+  F  L + G++P+ ITYN+I+ G
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLG 536

Query: 603 YC 604
            C
Sbjct: 537 LC 538



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 234/481 (48%), Gaps = 22/481 (4%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLS-PDLVQRLMSCLVDSNSVGQYYKLCRAMR------- 174
           VR G+++E    F ++ DM      PD++    S +      G+ +K  R M        
Sbjct: 121 VRNGELEEG---FKFLEDMVCRGDIPDIIA-CTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNAS 233
                 Y  L++G  + G I +A     Q++ R  V P++VT N IL+ LC +G++  A 
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSAL----QLLDRMSVSPDVVTYNTILRTLCDSGKLKEAM 232

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            + D  +     P+V+T++ LI A CKE+ + +A +L + M +    PD++ Y++LI+G+
Sbjct: 233 EVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGI 292

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K GRL E    L      G + +V+  + ++ +    G    A +    M+  G  P+V
Sbjct: 293 CKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSV 352

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++++ILI  LC++G +  A  +  ++      P+ L+Y+ L+   CK  K+       D 
Sbjct: 353 VTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDI 412

Query: 414 MIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M+ RG  PD V  + L+  L  D     A+    Q       P L  +NT++DG  ++ +
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGK 472

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             D +KL   M    +KPD+IT++ L+ G++ +G +  AI  F  + + G+ P+ ITY++
Sbjct: 473 TDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNS 532

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           I+ GL K +     +     M   G  P    Y +L+  L  E     AL+L  +L  RG
Sbjct: 533 IMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRG 592

Query: 589 L 589
           +
Sbjct: 593 V 593



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 230/524 (43%), Gaps = 97/524 (18%)

Query: 93  QFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + GKT+   R+  + L D G       Y+ LI  Y + G+I  ++++   MS     +SP
Sbjct: 157 KTGKTWKATRVM-EILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS-----VSP 210

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           D+V                              Y  ++  L   G ++ A  +  + +QR
Sbjct: 211 DVV-----------------------------TYNTILRTLCDSGKLKEAMEVLDRQMQR 241

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
              P+++T   +++  C    +G A  L D +   G KP+VVT++ LIN  CKE +L++A
Sbjct: 242 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEA 301

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +  N M      P++I ++I++  +   GR  +  + L   + +G    VV F+ +++ 
Sbjct: 302 IRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINF 361

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPN----------------------------------- 352
               G +GRA+   ++M   G  PN                                   
Sbjct: 362 LCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPD 421

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +++Y+ L+  LC+ G++  A  +  Q+  +   P L+TY+++IDG  K GK  D   L D
Sbjct: 422 IVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLD 481

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M  +GLKPD +  S L+ GL     + +A+ FF     M + PN   +N++M G C+ +
Sbjct: 482 EMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKAR 541

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP------ 521
           +    +     M     KP   ++ +LI G+A +G    A+ L  ++  RG+        
Sbjct: 542 QTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQ 601

Query: 522 -------DVITYSAIIHGLFKG----KNISVGLHMFKLMERNGV 554
                  +V  +  ++H LF G    + I VG+  F ++E N V
Sbjct: 602 VVVKIPFNVFYFYFLLHLLFNGLGSHREIFVGVGFFMILEPNYV 645



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 8/211 (3%)

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL-----IPNLF 454
           ++G+L +GF   ++M+ RG  PD + C+ LI GL      +    V   L     +P++ 
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +N L+ G C+       ++L   M   ++ PDV+T+  ++R +   G L  A+ +  + 
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           ++R   PDVITY+ +I    K   +   + +   M   G  PD+  YNVL+N + KE  L
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           D A++    +   G +P++IT+N I+   CS
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCS 329


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 223/419 (53%), Gaps = 5/419 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +  ++++ G  PNI T N +++ LC+ G+IG    LFD ++  G +PNVVT+ TLIN
Sbjct: 113 AFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLIN 172

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK      A +L   M + +  PD+++Y+ +ID L K  ++ +   L    + +G+  
Sbjct: 173 GLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISP 232

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            +  ++S++ A   + +        + M+N   +PNV+ +S ++  LC++G+++EA  + 
Sbjct: 233 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 292

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
             ++ R +EP+++TY++L+DG C   ++ +   ++D M+ +G  PD V  S LING    
Sbjct: 293 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 352

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             +  A+  F +  R  LIPN   ++TLM G C + R  D + LF  M      PD +++
Sbjct: 353 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 412

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L+  +     L  AI L   +    + PD+  Y+ +I G+ +   +     +F  +  
Sbjct: 413 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 472

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
            G+ P++  Y +++N L ++  L  A KLFG++  +G  P+  TYN I  G+   N  L
Sbjct: 473 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETL 531



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 223/410 (54%), Gaps = 5/410 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +  Q+   G  PNI T N ++   C   ++G A S+   +L +G +PN+ TF+TLI   C
Sbjct: 81  LSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLC 140

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            E K+ +   L++ M+     P+++ Y  LI+GL K G       LL +      + DVV
Sbjct: 141 VEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVV 200

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           V++S++D+      V +A   +  M++ G  P++ +Y+ LI  LC          L  ++
Sbjct: 201 VYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEM 260

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
           +  ++ P+++ +S+++D  CK GK+ +   + D MIKRG++P+ V  + L++G      M
Sbjct: 261 VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 320

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++ F   V     P++  ++TL++G C+++R    + LF  M    + P+ +T++ L
Sbjct: 321 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 380

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           + G+   G L  AI LF +M+ RG  PD ++Y  ++  L K + +   + + K +E + +
Sbjct: 381 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 440

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            PDI IY ++++ + +   L+AA  LF  L+ +GL P++ TY  +I G C
Sbjct: 441 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 490



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 263/509 (51%), Gaps = 17/509 (3%)

Query: 87  FDKMVIQFGKTYNFFRLFR-----DSLGDFGCDYSF--LIENYVRIGKIDESVEIFAYMS 139
           F K++I   K  ++  +       DS G     Y+   LI ++  + ++  +  + A + 
Sbjct: 62  FTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKIL 121

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIE 195
            +G   +      L+  L     +G+   L   M G+GF      Y  L+NGL + G   
Sbjct: 122 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 181

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  + R + Q    P++V    I+  LC + Q+  A +LF  ++  G  P++ T+++LI
Sbjct: 182 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 241

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +A C   + +    L N M+   ++P+++I+S ++D L K G++ E ++++   + RG++
Sbjct: 242 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 301

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            +VV ++++MD +    ++  AV+ +D M+  GF P+V+SYS LI G C+  R+ +A  L
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F ++  + L P+ +TYS+L+ G C  G+L+D  +L+  M+ RG  PD V   +L++ L  
Sbjct: 362 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 421

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              + +A+          + P++ I+  ++DG CR         LF  +    + P+V T
Sbjct: 422 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 481

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +T++I G+  QG L+ A  LF +M ++G +P+  TY+ I  G  +      G+ + + M 
Sbjct: 482 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 541

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             G + D++   VL+ ML  +  LD ++K
Sbjct: 542 ARGFSADVSTSTVLVEMLSDD-GLDQSVK 569



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 85/156 (54%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN++  N L++  C L+R      +   +     +P++ T   LIRG+  +G +   + L
Sbjct: 92  PNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHL 151

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F +M+  G  P+V+TY  +I+GL K  + S  + + + ME+    PD+ +Y  +++ L K
Sbjct: 152 FDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 211

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +  +  A  LF ++  +G+ P I TYN++I   C+L
Sbjct: 212 DRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 247



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%)

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + DAL  F + + M   P++  F  L+    ++K  +  + L   M  + I P++ T  +
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI        L  A  +  ++LK G  P++ T++ +I GL     I   LH+F  M   G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             P++  Y  L+N L K  +  AA++L   +     +PD++ Y +II   C
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 210



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 10/168 (5%)

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F  S   T       FNTL D      R          M   +  P +   T L+  I  
Sbjct: 22  FLSSSHNTFHSKSLNFNTLDDALSSFNR----------MLHMHPPPSIADFTKLLISITK 71

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
               S+ + L  QM   G+ P++ T + +I+     + +     +   + + G  P+IA 
Sbjct: 72  MKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIAT 131

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +N L+  L  E  +   L LF ++   G +P+++TY T+I G C + S
Sbjct: 132 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGS 179


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 256/505 (50%), Gaps = 30/505 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ Y ++G+IDE+  +   MS  G  + P+L+    +++ L    S+ + +++   
Sbjct: 252 YNTLIDAYCKMGRIDEAFGLLKSMSSKG--MQPNLISYNVIINGLCREGSMKEAWEILEE 309

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KGF      Y  L+NG  ++G    A  +H ++++ G  P++VT   ++  +C    
Sbjct: 310 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 369

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A   FD + + G +PN  T++TLI+ F ++  L +A+++ N M E    P ++ Y+ 
Sbjct: 370 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 429

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            I G     R++E   ++   +++GL  DVV +S+++  +   G++ RA Q    M+  G
Sbjct: 430 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 489

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ ++YS LI+GLC+  RL EAC L  ++L   L P   TY++LI+ +C  G L    
Sbjct: 490 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 549

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D MI +G  PDAV  S+LINGL       +A R  F+ +    +P+   ++TL++ C
Sbjct: 550 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 609

Query: 464 CRL--KRATDTVKLFMLMGMY-------------NIKPDVITHTVLIRGIASQGSLSSAI 508
             +  K     +K F + G+              N KP    + V+I G    G+L  A 
Sbjct: 610 SNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAF 669

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
            L+ +M+  G  P  +T   +I  LFK G N  +   +   + R+    +  +  VL+ +
Sbjct: 670 NLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL-RSCRLNEAELAKVLVEI 728

Query: 568 LIKECNLDAALKLFGQLTDRGLEPD 592
             KE N++A L +   +   GL P+
Sbjct: 729 NHKEGNMEAVLNVLTDMAKDGLLPN 753



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 229/431 (53%), Gaps = 7/431 (1%)

Query: 177 GFCVYEFLMNGLLR-KGVIE-NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G   Y  +++ ++R +G ++ +A  ++R++I+    PN+ T N +++  C  G++     
Sbjct: 176 GVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLG 235

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            F  +   G  PNVVT++TLI+A+CK  ++++AF L   M    + P+LI Y+++I+GL 
Sbjct: 236 CFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLC 295

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + G +KE  E+L     +G   D V ++++++ Y   G+  +A+  +  M+  G  P+V+
Sbjct: 296 REGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV 355

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI  +C+   L  A   F Q+ IR L P+  TY++LIDGF + G L + + + + M
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415

Query: 415 IKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            + G  P  V  +  I+G      M +AL    + V   L P++  ++T++ G CR    
Sbjct: 416 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 475

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
               ++   M    + PD +T++ LI+G+     L+ A  L  +ML  GL PD  TY+ +
Sbjct: 476 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 535

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I+      +++  LH+   M   G  PD   Y+VL+N L K+     A +L  +L     
Sbjct: 536 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 595

Query: 590 EPDIITYNTII 600
            P  +TY+T+I
Sbjct: 596 VPSDVTYDTLI 606



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 217/441 (49%), Gaps = 20/441 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++   + G I+ AF + + +  +G  PN+++ N I+  LC  G +  A  + + +
Sbjct: 251 TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 310

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+ VT++TL+N +CKE    +A  ++  M+   + P ++ Y+ LI+ + KA  L
Sbjct: 311 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 370

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               E       RGL+ +   +++++D +   G +  A +  + M   GF P+V++Y+  
Sbjct: 371 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 430

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C   R+ EA G+  +++ + L P +++YS++I GFC+ G+L   F +   M+++G+
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PDAV  S LI GL     + +A     + + M L P+ F + TL++  C        + 
Sbjct: 491 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 550

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH--- 531
           L   M      PD +T++VLI G+  Q     A  L F+++     P  +TY  +I    
Sbjct: 551 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 610

Query: 532 --------GLFKGKNISVGLH----MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
                    L KG  +   +H    +F+ M      P  A+YNV+++   +  NL  A  
Sbjct: 611 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 670

Query: 580 LFGQLTDRGLEPDIITYNTII 600
           L+ ++   G  P  +T  T+I
Sbjct: 671 LYKEMIHSGFVPHTVTVITLI 691



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 212/402 (52%), Gaps = 11/402 (2%)

Query: 215 TCNKILKRLCINGQIGNASSLFDVL---LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           T   + + L ++    + SS+F  L     V    + V F  ++ ++     +++A    
Sbjct: 107 TAQTLAQELALSASDPSGSSIFQCLKDSYHVYNSSSAV-FDLMVKSYSHLNMIDQAVNTI 165

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKA-GRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYV 329
           NL      +P ++ Y+ ++D + ++ G +K   E +   + R  +  +V  ++ ++  + 
Sbjct: 166 NLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFC 225

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            +G++ + +  +  M   G LPNV++Y+ LI   C+ GR+ EA GL   +  + ++P+L+
Sbjct: 226 SVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLI 285

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQS 444
           +Y+ +I+G C+ G +++ + + + M  +G  PD V  + L+NG   +     AL    + 
Sbjct: 286 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 345

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           VR  + P++  +  L++  C+ +     ++ F  M +  ++P+  T+T LI G + QG L
Sbjct: 346 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 405

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           + A  +  +M + G +P V+TY+A IHG    + +   L + + M   G+APD+  Y+ +
Sbjct: 406 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 465

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           ++   ++  LD A ++  ++ ++G+ PD +TY+++I G C +
Sbjct: 466 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 507


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 223/419 (53%), Gaps = 5/419 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +  ++++ G  PNI T N +++ LC+ G+IG    LFD ++  G +PNVVT+ TLIN
Sbjct: 122 AFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLIN 181

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK      A +L   M + +  PD+++Y+ +ID L K  ++ +   L    + +G+  
Sbjct: 182 GLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISP 241

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            +  ++S++ A   + +        + M+N   +PNV+ +S ++  LC++G+++EA  + 
Sbjct: 242 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 301

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
             ++ R +EP+++TY++L+DG C   ++ +   ++D M+ +G  PD V  S LING    
Sbjct: 302 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 361

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             +  A+  F +  R  LIPN   ++TLM G C + R  D + LF  M      PD +++
Sbjct: 362 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 421

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L+  +     L  AI L   +    + PD+  Y+ +I G+ +   +     +F  +  
Sbjct: 422 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 481

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
            G+ P++  Y +++N L ++  L  A KLFG++  +G  P+  TYN I  G+   N  L
Sbjct: 482 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETL 540



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 223/410 (54%), Gaps = 5/410 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +  Q+   G  PNI T N ++   C   ++G A S+   +L +G +PN+ TF+TLI   C
Sbjct: 90  LSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLC 149

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            E K+ +   L++ M+     P+++ Y  LI+GL K G       LL +      + DVV
Sbjct: 150 VEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVV 209

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           V++S++D+      V +A   +  M++ G  P++ +Y+ LI  LC          L  ++
Sbjct: 210 VYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEM 269

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
           +  ++ P+++ +S+++D  CK GK+ +   + D MIKRG++P+ V  + L++G      M
Sbjct: 270 VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 329

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++ F   V     P++  ++TL++G C+++R    + LF  M    + P+ +T++ L
Sbjct: 330 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 389

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           + G+   G L  AI LF +M+ RG  PD ++Y  ++  L K + +   + + K +E + +
Sbjct: 390 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 449

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            PDI IY ++++ + +   L+AA  LF  L+ +GL P++ TY  +I G C
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 499



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 263/509 (51%), Gaps = 17/509 (3%)

Query: 87  FDKMVIQFGKTYNFFRLFR-----DSLGDFGCDYSF--LIENYVRIGKIDESVEIFAYMS 139
           F K++I   K  ++  +       DS G     Y+   LI ++  + ++  +  + A + 
Sbjct: 71  FTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKIL 130

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIE 195
            +G   +      L+  L     +G+   L   M G+GF      Y  L+NGL + G   
Sbjct: 131 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 190

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  + R + Q    P++V    I+  LC + Q+  A +LF  ++  G  P++ T+++LI
Sbjct: 191 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 250

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +A C   + +    L N M+   ++P+++I+S ++D L K G++ E ++++   + RG++
Sbjct: 251 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 310

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            +VV ++++MD +    ++  AV+ +D M+  GF P+V+SYS LI G C+  R+ +A  L
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F ++  + L P+ +TYS+L+ G C  G+L+D  +L+  M+ RG  PD V   +L++ L  
Sbjct: 371 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 430

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              + +A+          + P++ I+  ++DG CR         LF  +    + P+V T
Sbjct: 431 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 490

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +T++I G+  QG L+ A  LF +M ++G +P+  TY+ I  G  +      G+ + + M 
Sbjct: 491 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 550

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             G + D++   VL+ ML  +  LD ++K
Sbjct: 551 ARGFSADVSTSTVLVEMLSDD-GLDQSVK 578



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 85/156 (54%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN++  N L++  C L+R      +   +     +P++ T   LIRG+  +G +   + L
Sbjct: 101 PNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHL 160

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F +M+  G  P+V+TY  +I+GL K  + S  + + + ME+    PD+ +Y  +++ L K
Sbjct: 161 FDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 220

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +  +  A  LF ++  +G+ P I TYN++I   C+L
Sbjct: 221 DRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 256



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%)

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + DAL  F + + M   P++  F  L+    ++K  +  + L   M  + I P++ T  +
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI        L  A  +  ++LK G  P++ T++ +I GL     I   LH+F  M   G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             P++  Y  L+N L K  +  AA++L   +     +PD++ Y +II   C
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 219



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 10/168 (5%)

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F  S   T       FNTL D      R          M   +  P +   T L+  I  
Sbjct: 31  FLSSSHNTFHSKSLNFNTLDDALSSFNR----------MLHMHPPPSIADFTKLLISITK 80

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
               S+ + L  QM   G+ P++ T + +I+     + +     +   + + G  P+IA 
Sbjct: 81  MKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIAT 140

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +N L+  L  E  +   L LF ++   G +P+++TY T+I G C + S
Sbjct: 141 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGS 188


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 230/425 (54%), Gaps = 5/425 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N L R   ++ +  +  ++ + G  P+ +T N ++  LC  G+I  A  LF+ ++  G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNV++++T+IN  CK      A  ++  M +    P+++ YS +ID L K   + +  
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           E L   ++RG+  +V  ++S++  +  +G +  A + +  M+    +PN ++++IL+ GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G + EA  +F  +  + +EP + TY++L+DG+C    + +   +++ MI++G  P A
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              ++LING      M +A     +     L P+   ++TLM G C+L R  + + LF  
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M  Y   P+++T+ +L+ G    G L  A+ L   M ++ L P+++ Y+ +I G+F    
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           + V   +F  +  +G  PDI  Y V++  L+KE   D A  LF ++ D G  P+  +YN 
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 553

Query: 599 IICGY 603
           +I G+
Sbjct: 554 MIQGF 558



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 236/489 (48%), Gaps = 38/489 (7%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI    R+  +D SV +   M  +GI+  PD +                           
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIH--PDAI--------------------------- 164

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              +  L+NGL  +G I+ A  +  ++++RG  PN+++   ++  LC  G    A  +F 
Sbjct: 165 --TFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFK 222

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +   G KPNVVT+ST+I++ CK+  +  A +  + M+E  + P++  Y+ ++ G    G
Sbjct: 223 KMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLG 282

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           +L E   L    + R +  + V F+ ++D     G V  A   ++ M   G  P++ +Y+
Sbjct: 283 QLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYN 342

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
            L+ G C Q  + EA  +F +++IR+   P   +Y+ LI+G+CKS ++ +  SL   M  
Sbjct: 343 ALMDGYCLQRLMNEAKKVF-EIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYH 401

Query: 417 RGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           + L PD V  S L+ GL       +AL  F +       PNL  +  L+DG C+     +
Sbjct: 402 KALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDE 461

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            +KL   M    ++P+++ +T+LI G+   G L  A  LF ++   G  PD+ TY+ +I 
Sbjct: 462 ALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIK 521

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL K         +F+ ME +G  P+   YNV++   ++  +   A++L  ++  +    
Sbjct: 522 GLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSV 581

Query: 592 DIITYNTII 600
           ++ T+  ++
Sbjct: 582 NLSTFQMLL 590



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 205/397 (51%), Gaps = 5/397 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P++V   K L       Q     SL + + L     NV + + LIN  C+   ++ +  +
Sbjct: 91  PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M ++ + PD I ++ LI+GL   G++KE  EL    + RG + +V+ +++V++    
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G+   AV  + +M   G  PNV++YS +I  LC+   + +A     +++ R + P++ T
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL----RFFFQSVR 446
           Y+S++ GFC  G+L +   L+  M+ R + P+ V  ++L++GL  + +    R  F+++ 
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMT 330

Query: 447 MTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              + P++  +N LMDG C  +   +  K+F +M      P   ++ +LI G      + 
Sbjct: 331 EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMD 390

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  L  +M  + L PD +TYS ++ GL +       L++FK M   G  P++  Y +LL
Sbjct: 391 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILL 450

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +   K  +LD ALKL   + ++ LEP+I+ Y  +I G
Sbjct: 451 DGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 197/383 (51%), Gaps = 40/383 (10%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A + F  ++ + P+P+VV F   + +F K+ +      L N M    +  ++   +I
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+ L                     +L+ V FS               V    +M   G
Sbjct: 134 LINCL--------------------CRLNHVDFS---------------VSVLGKMFKLG 158

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ I+++ LI GLC +G++ EA  LF +++ R  EP++++Y+++I+G CK+G      
Sbjct: 159 IHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAV 218

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            ++  M + G KP+ V  S +I+ L     + DA+ F  + V   + PN+F +N+++ G 
Sbjct: 219 DVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGF 278

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C L +  +  +LF  M   ++ P+ +T T+L+ G+  +G +S A L+F  M ++G+ PD+
Sbjct: 279 CNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDI 338

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+A++ G    + ++    +F++M R G AP    YN+L+N   K   +D A  L  +
Sbjct: 339 STYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAE 398

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           +  + L PD +TY+T++ G C L
Sbjct: 399 MYHKALNPDTVTYSTLMQGLCQL 421



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 183/397 (46%), Gaps = 45/397 (11%)

Query: 37  AILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQ 93
            ++  L KT N + A+  FK        PN+   + +I  L +  + + A     +MV +
Sbjct: 203 TVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVER 262

Query: 94  ------------------FGKTYNFFRLFRDSLG----DFGCDYSFLIENYVRIGKIDES 131
                              G+     RLF++ +G         ++ L++   + G + E+
Sbjct: 263 GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEA 322

Query: 132 VEIFAYMSDMGIYLSPDL-----------VQRLMSCLVDSNSVGQYYK-LCRAMRGKGFC 179
             +F  M++ G+   PD+           +QRLM      N   + ++ + R     G  
Sbjct: 323 RLVFETMTEKGV--EPDISTYNALMDGYCLQRLM------NEAKKVFEIMIRKGCAPGAH 374

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NG  +   ++ A  +  ++  +   P+ VT + +++ LC  G+   A +LF  +
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM 434

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              GP PN+VT+  L++ FCK   L++A +L   M E  L P+++ Y+ILI+G+F AG+L
Sbjct: 435 CSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKL 494

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +   EL       G + D+  ++ ++   +  G    A   + +M + GFLPN  SY+++
Sbjct: 495 EVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVM 554

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           I+G  Q      A  L  +++ +R   +L T+  L+D
Sbjct: 555 IQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 93/183 (50%)

Query: 422 DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           D  V +   N  + DAL  F++ VR+   P++  F   +    + K+ +  V L   M +
Sbjct: 62  DGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDL 121

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
           + +  +V +  +LI  +     +  ++ +  +M K G+ PD IT++A+I+GL     I  
Sbjct: 122 FRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            + +F  M + G  P++  Y  ++N L K  N   A+ +F ++   G +P+++TY+TII 
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIID 241

Query: 602 GYC 604
             C
Sbjct: 242 SLC 244


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 254/497 (51%), Gaps = 9/497 (1%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L+   V++G +D + E++  ++  GI L+   +  +++ L   + +         M  KG
Sbjct: 156 LLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKG 215

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L+N   R+G++  AF +   +  +G  P + T N ++  LC  G+   A 
Sbjct: 216 IFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAK 275

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            +F+ +L +G  P+  T++TL+   C+     +A  +++ M+   + PDLI +S LI   
Sbjct: 276 GVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVS 335

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G L +           GL  D V+++ +++ Y   G +  A++  D+ML  G   +V
Sbjct: 336 SRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDV 395

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ ++ GLC++  L +A  LF +++ R + P   T+++LI G CK G +    SL+  
Sbjct: 396 VAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGI 455

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M ++ +KPD V  ++LI+G      M  A   + + +   + PN   +  L++G C L  
Sbjct: 456 MTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGF 515

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            ++  +L+  M    IKP ++T   +I+G    G LS A     +M+  G+ PD ITY+ 
Sbjct: 516 VSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNT 575

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+G  KG+ +     +   ME  G+ PD+  YNV+LN   ++  +  A  +  ++ +RG
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635

Query: 589 LEPDIITYNTIICGYCS 605
           ++PD  TY T+I GY S
Sbjct: 636 IDPDRSTYTTLINGYVS 652



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 243/476 (51%), Gaps = 11/476 (2%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
           KID+       M   GI+        L++       +G+ +++  +M GKG       Y 
Sbjct: 200 KIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYN 259

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            ++NGL +KG    A  +  +++  G  P+  T N +L   C N     A  +F  +L  
Sbjct: 260 AVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHR 319

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P++++FS+LI    +   L++A   +  M    LVPD +IY+ILI+G  + G + E 
Sbjct: 320 GVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEA 379

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            E+    L++G  LDVV ++++++       +  A   +D M+  G +P+  +++ LI G
Sbjct: 380 LEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHG 439

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C++G + +A  LFG +  + ++P ++TY+ LIDGFCK+ ++     L++ MI R + P+
Sbjct: 440 HCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPN 499

Query: 423 AVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            +  ++L+NG      + +A R + + +R  + P L   NT++ G CR    +   +   
Sbjct: 500 HISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLG 559

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-G 536
            M    + PD IT+  LI G      +  A  L  +M  +GL PDV+TY+ I++G  + G
Sbjct: 560 KMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQG 619

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           +     L + K++ER G+ PD + Y  L+N  + + NL  A +   ++  RG  PD
Sbjct: 620 RMQEAELILRKMIER-GIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 204/414 (49%), Gaps = 38/414 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+    R     E+ +IF+ M   G+  SPDL+    L+     +  + Q     R 
Sbjct: 293 YNTLLVESCRNNNFLEAKDIFSDMLHRGV--SPDLISFSSLIGVSSRNGHLDQALMYFRD 350

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G      +Y  L+NG  R G++  A  +  +++++G   ++V  N IL  LC    
Sbjct: 351 MKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKL 410

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A++LFD ++  G  P+  TF+TLI+  CKE  + KA  L+ +M + ++ PD++ Y+I
Sbjct: 411 LADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNI 470

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDG  K   +++ NEL    + R +  + + ++ +++ Y  +G V  A + +D M+  G
Sbjct: 471 LIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKG 530

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P +++ + +IKG C+ G L +A    G+++   + P  +TY++LI+GF K   +   F
Sbjct: 531 IKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAF 590

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L + M  +GL+PD V                               +N +++G CR  R
Sbjct: 591 FLINKMETKGLQPDVVT------------------------------YNVILNGFCRQGR 620

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +   +   M    I PD  T+T LI G  SQ +L  A     +ML+RG  PD
Sbjct: 621 MQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 231/500 (46%), Gaps = 75/500 (15%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ L+   ++   +       + + ++GF+ +I  CN +L  L   G +  A  +++ +
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLE---------------------------------- 265
              G + NV T + ++NA CK+ K++                                  
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236

Query: 266 -KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR-------------------------- 298
            +AF++ N M    L P L  Y+ +I+GL K GR                          
Sbjct: 237 GEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTL 296

Query: 299 ---------LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
                      E  ++    L RG+  D++ FSS++      G + +A+  +  M   G 
Sbjct: 297 LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGL 356

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           +P+ + Y+ILI G C+ G + EA  +  ++L +     ++ Y+++++G CK   L D  +
Sbjct: 357 VPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANA 416

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L+D M++RG+ PD    + LI+G      MG AL  F    +  + P++  +N L+DG C
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFC 476

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +        +L+  M    I P+ I++ +L+ G  + G +S A  L+ +M+++G+ P ++
Sbjct: 477 KTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLV 536

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           T + +I G  +  ++S        M   GV PD   YN L+N  +K   +D A  L  ++
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKM 596

Query: 585 TDRGLEPDIITYNTIICGYC 604
             +GL+PD++TYN I+ G+C
Sbjct: 597 ETKGLQPDVVTYNVILNGFC 616



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 205/384 (53%), Gaps = 5/384 (1%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++   +  F +L   G   ++   ++L+    K   ++ A+++YN +    +  ++   +
Sbjct: 130 KLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLN 189

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I+++ L K  ++ +    L+    +G+  D+V ++++++AY   G +G A +  + M   
Sbjct: 190 IMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGK 249

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P + +Y+ +I GLC++GR V A G+F ++L   L P   TY++L+   C++    + 
Sbjct: 250 GLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEA 309

Query: 408 FSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             ++ +M+ RG+ PD +  S LI     NG +  AL +F       L+P+  I+  L++G
Sbjct: 310 KDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILING 369

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            CR    ++ +++   M       DV+ +  ++ G+  +  L+ A  LF +M++RG+ PD
Sbjct: 370 YCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD 429

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
             T++ +IHG  K  N+   L +F +M +  + PDI  YN+L++   K   ++ A +L+ 
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWN 489

Query: 583 QLTDRGLEPDIITYNTIICGYCSL 606
           ++  R + P+ I+Y  ++ GYC+L
Sbjct: 490 EMISRKIFPNHISYAILVNGYCNL 513



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 148/294 (50%), Gaps = 5/294 (1%)

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           +D +VF  ++ +YV    +     T+  +   GFL ++ + + L+ GL + G +  A  +
Sbjct: 113 VDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEV 172

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
           + ++    +E ++ T + +++  CK  K+ D      +M ++G+  D V  + LIN    
Sbjct: 173 YNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCR 232

Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            GL+G+A           L P LF +N +++G C+  R      +F  M    + PD  T
Sbjct: 233 EGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTT 292

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  L+       +   A  +F  ML RG++PD+I++S++I    +  ++   L  F+ M+
Sbjct: 293 YNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMK 352

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +G+ PD  IY +L+N   +   +  AL++  ++ ++G   D++ YNTI+ G C
Sbjct: 353 TSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLC 406



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 22/233 (9%)

Query: 400 KSGKLRDGFSLYDNMIKR-GLKPDAVVCSLL-------INGLMGDAL-RFFFQSVRMTLI 450
           +S +L D  +L   MI+R G+    +V SL+       ++ L+ D L R + Q+ ++   
Sbjct: 75  RSKRLSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEG 134

Query: 451 PNLFIF-------------NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            + F               N+L+ G  ++       +++  +    I+ +V T  +++  
Sbjct: 135 TDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNA 194

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +     +         M ++G+  D++TY+ +I+   +   +     +   M   G+ P 
Sbjct: 195 LCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPT 254

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
           +  YN ++N L K+     A  +F ++   GL PD  TYNT++   C  N+ L
Sbjct: 255 LFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFL 307


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 257/503 (51%), Gaps = 16/503 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+    ++G+++E++++   + D G   +PD+V    L+  L       + YKL + 
Sbjct: 24  YNALLNGLCKMGRLEEAIDLLRKIVDNGC--TPDVVTYTSLIDGLGKEKRSFEAYKLFKE 81

Query: 173 MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G  +    Y  L+  LL+ G I  A  +++ +   G VP++VT + ++  L   G+
Sbjct: 82  MALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 141

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           IG A  +F  +   G  PN V +S LI+  CK  K++ A ++   M +    PD I Y++
Sbjct: 142 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNV 201

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT--YDRMLN 346
           LIDGL K+G ++         L+ G K DV  ++ ++  +   G+   A  +   +  +N
Sbjct: 202 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTIN 261

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
           G  + ++ +Y+ ++  L +  ++ EA  L  ++      P++ TY++L++G CK G+L +
Sbjct: 262 GCTI-DIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 320

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMD 461
              L   ++  G  PD V  + LI+GL  +     A + F +     L  +   +  L+ 
Sbjct: 321 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIR 380

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
              +  +      ++  M  +   PDV+T + +I G++  G + +A+ +F  M  RGL P
Sbjct: 381 ELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 440

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           + + YSA+IHGL K + +   L M   M++    PD   YN+L++ L K  +++AA   F
Sbjct: 441 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 500

Query: 582 GQLTDRGLEPDIITYNTIICGYC 604
            ++ + G +PD+ TYN +I G+C
Sbjct: 501 DEMLEAGCKPDVYTYNILISGFC 523



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 254/511 (49%), Gaps = 22/511 (4%)

Query: 96  KTYNFFRLFRD-SLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV- 150
           +++  ++LF++ +L     D   Y+ LI   ++ GKI ++  ++  M+  G    PD+V 
Sbjct: 71  RSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV--PDVVT 128

Query: 151 -QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVI 205
              ++  L  +  +G   ++ ++M  +G      VY  L++GL +   ++ A  M  Q+ 
Sbjct: 129 LSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 188

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           +    P+ +T N ++  LC +G +  A + FD +L  G KP+V T++ LI+ FCK    +
Sbjct: 189 KAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTD 248

Query: 266 KAFQLYNLMMEMDL---VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            A   ++L  E  +     D+  Y+ ++D L K  +++E   L+      G    +  ++
Sbjct: 249 AAS--HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYN 306

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           ++++    +G +  A+    ++++ G  P+V++Y+ LI GL ++ R  EA  LF ++ +R
Sbjct: 307 ALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 366

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            L    + Y++LI    ++GK+    S+Y  M   G  PD V  S +I+GL     +G A
Sbjct: 367 GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAA 426

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           +R F       L PN  +++ L+ G C+ ++    +++   M      PD IT+ +LI G
Sbjct: 427 VRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 486

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G + +A   F +ML+ G  PDV TY+ +I G  K  N      +F  M  +  + +
Sbjct: 487 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSAN 546

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +  Y  L++ L K   L  A   F  + +RG
Sbjct: 547 VVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 215/487 (44%), Gaps = 76/487 (15%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           IE A  +  ++   G  P I T N +L  LC  G++  A  L   ++  G  P+VVT+++
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI+   KE +  +A++L+  M    L  D + Y+ LI  L + G++ + + +  T    G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
              DVV  S+++D     G +G AV+ +  M   G  PN + YS LI GLC+  ++  A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +  Q+      P  +TY+ LIDG CKSG +    + +D M++ G KPD    ++LI+G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 434 -----------------------------------------MGDALRFFFQSVRMTLIPN 452
                                                    + +A+    +       P 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 453 LFIFNTLMDGCCRL-----------------------------------KRATDTVKLFM 477
           +  +N L++G C++                                   KR+ +  KLF 
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M +  +  D + +T LIR +   G +  A  ++  M   G  PDV+T S +I GL K  
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I   + +FK ME  G+AP+  +Y+ L++ L K   +D AL++  Q+      PD ITYN
Sbjct: 422 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 481

Query: 598 TIICGYC 604
            +I G C
Sbjct: 482 ILIDGLC 488



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 198/416 (47%), Gaps = 41/416 (9%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +I  A +L + +   G  P + T++ L+N  CK  +LE+A  L   +++    PD++ Y+
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LIDGL K  R  E  +L      RGL LD V +++++   +  G + +A   Y  M + 
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +P+V++ S +I GL + GR+  A  +F  +  R L P+ + YS+LI G CK+ K+   
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDG 462
             +   M K    PD +  ++LI+GL   GD   A  FF + +     P+++ +N L+ G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 463 CCRL------------------------------------KRATDTVKLFMLMGMYNIKP 486
            C+                                     K+  + V L   +      P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
            + T+  L+ G+   G L  AI L  +++  G TPDV+TY+++I GL K K       +F
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           K M   G+A D   Y  L+  L++   +  A  ++  +T  G  PD++T +T+I G
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 416



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 209/508 (41%), Gaps = 85/508 (16%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
           + ++  L K      A++ FK       +PN    + LIH L ++   D A  +  +M  
Sbjct: 130 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 189

Query: 93  QFGK----TYNFF-------------RLFRDSLGDFGCD-----YSFLIENYVRIGKIDE 130
            F      TYN               R F D + + GC      Y+ LI  + + G  D 
Sbjct: 190 AFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA 249

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR 190
           +    A  + +              C +D ++                  Y  +++ L +
Sbjct: 250 ASHSLAQETTIN------------GCTIDIHT------------------YTAIVDWLAK 279

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
              IE A  +  ++   G  P I T N +L  LC  G++  A  L   ++  G  P+VVT
Sbjct: 280 NKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 339

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           +++LI+   KE +  +A++L+  M    L  D + Y+ LI  L + G++ + + +  T  
Sbjct: 340 YTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMT 399

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
             G   DVV  S+++D     G +G AV+ +  M   G  PN + YS LI GLC+  ++ 
Sbjct: 400 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 459

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
            A  +  Q+      P  +TY+ LIDG CKSG +    + +D M++ G KPD        
Sbjct: 460 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD-------- 511

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
                                 ++ +N L+ G C+         +F  M       +V+T
Sbjct: 512 ----------------------VYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVT 549

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRG 518
           +  LI G+  +  L+ A L F  M +RG
Sbjct: 550 YGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 164/350 (46%), Gaps = 41/350 (11%)

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           K+E+A  L   +      P +  Y+ L++GL K GRL+E  +LL                
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL---------------- 44

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
                               ++++ G  P+V++Y+ LI GL ++ R  EA  LF ++ +R
Sbjct: 45  -------------------RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 85

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            L    + Y++LI    ++GK+    S+Y  M   G  PD V  S +I+GL     +G A
Sbjct: 86  GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAA 145

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           +R F       L PN  +++ L+ G C+ ++    +++   M      PD IT+ VLI G
Sbjct: 146 VRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDG 205

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAP 556
           +   G + +A   F +ML+ G  PDV TY+ +I G  K  N     H + +    NG   
Sbjct: 206 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTI 265

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           DI  Y  +++ L K   ++ A+ L  ++T  G  P I TYN ++ G C +
Sbjct: 266 DIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKM 315


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 162/551 (29%), Positives = 270/551 (49%), Gaps = 62/551 (11%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S LI+   + GK+ E+ E+   M   G  L       L+  L   + + +   L  +M+ 
Sbjct: 351 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410

Query: 176 KG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQR------GFVPNIVTCNKILKRLCI 225
            G       Y  LM GL + G I  A  +H++++           P +++ + I+  LC 
Sbjct: 411 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 470

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           + +   A  LF+ +   G  P+V++++TLI+ FC   K EKA  L+N M+++ + PD+  
Sbjct: 471 DRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 530

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
            S+LID L K G++ E N+LL   + RG  LDVV  ++++        + +A Q + +M 
Sbjct: 531 SSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQ 590

Query: 346 NGGFLPNV-----------------------------------------ISYSILIKGLC 364
             G +PNV                                         ISYSI+I GLC
Sbjct: 591 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 650

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + GR  EA  LF ++    + P +++Y+SLI GFC+SGK +D   L++ M+  G++PD  
Sbjct: 651 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 710

Query: 425 VCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             S+LI+     G + +A       ++   IPN   + TL+ G C   R ++  +LFM M
Sbjct: 711 TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 770

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK------RGLTPDVITYSAIIHGL 533
                 PDV+T+  L++G+   G++ +A+ L  +ML           PDVI+YS II GL
Sbjct: 771 QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGL 830

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K         +FK M+  GV P++  Y  L++   +   L+ A  LF ++ D+G++ + 
Sbjct: 831 CKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNA 890

Query: 594 ITYNTIICGYC 604
           +TY+ +I G+C
Sbjct: 891 VTYSVMIHGFC 901



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 252/517 (48%), Gaps = 28/517 (5%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S LI+   + GK+ E+ E+   M   G  L       L+  L   + + +   L  +M+ 
Sbjct: 58  SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 117

Query: 176 KG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQR------GFVPNIVTCNKILKRLCI 225
            G       Y  LM GL + G I  A  +H++++           P +++ + I+  LC 
Sbjct: 118 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 177

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           + +   A  LF  +   G  P+V+++++LI+ FC   K EKA  L+N M+++ + PD+  
Sbjct: 178 DRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTT 237

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
             +LID   K G++ E NELL   + RG  LD+V +S+++        +  A Q +  M 
Sbjct: 238 SGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMK 297

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL-------IRRLEPSLLTYSSLIDGF 398
             G  P+ I+Y  L+KGLCQ G++  A  L  ++L       I+ + P + T S LID  
Sbjct: 298 KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDIL 357

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           CK GK+ +   L + MI+RG   D V  S LI GL     + +A   F    ++   P+ 
Sbjct: 358 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 417

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLM----GMYNI--KPDVITHTVLIRGIASQGSLSSA 507
             + TLM G C+       ++L   M    G Y I  KP +I+++++I G+        A
Sbjct: 418 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 477

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             LF +M  +G+ PDVI+Y+ +IHG            +F  M   G+ PD+   +VL++M
Sbjct: 478 RELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDM 537

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L K+  +  A KL   +  RG   D++T  T++ G C
Sbjct: 538 LCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLC 574



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 268/591 (45%), Gaps = 104/591 (17%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           YS +I+   +  + DE+ E+F  M   G  + PD++    L+     S    +   L   
Sbjct: 168 YSIIIDGLCKDRREDEARELFKEMKAQG--MMPDVISYTSLIHGFCHSGKWEKAKCLFNE 225

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G          L++   ++G +  A  +   ++ RG + +IVT + ++K LC+  +
Sbjct: 226 MLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHR 285

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD-------LVP 281
           I  A+ LF  +  +G +P+ + + TL+   C+  K+  A  L+  M+          + P
Sbjct: 286 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRP 345

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS------------------- 322
           D+   S+LID L K G++ E NELL   + RG  LD+V +S                   
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405

Query: 323 ----------------SVMDAYVGIGDVGRAVQTYDRMLN--GGF----LPNVISYSILI 360
                           ++M      G++  A+Q +  MLN  G +     P +ISYSI+I
Sbjct: 406 MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIII 465

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC+  R  EA  LF ++  + + P +++Y++LI GFC SGK      L++ M+  G++
Sbjct: 466 DGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 525

Query: 421 P-----------------------------------DAVVCSLLINGL-----MGDALRF 440
           P                                   D V C+ L+ GL     +  A + 
Sbjct: 526 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQL 585

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM-------GMYNIKPDVITHTV 493
           F +  ++  +PN+    TLM G C+       ++L   M       G+ N KP+ I++++
Sbjct: 586 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGI-NCKPNAISYSI 644

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I G+   G    A  LF +M   G+ PDVI+Y+++IHG  +        ++F  M   G
Sbjct: 645 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 704

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           V PD+  ++VL++ML KE  +  A +L   +  RG  P+ +TY T++ G C
Sbjct: 705 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 223/451 (49%), Gaps = 42/451 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  +   GK +++  +F  M D+GI   PD+     L+  L     V +  KL   
Sbjct: 496 YTTLIHGFCLSGKWEKAKCLFNEMLDVGI--QPDVTTSSVLIDMLCKKGKVIEANKLLEV 553

Query: 173 MRGKGFCVYEF-----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           +  +G C+ +      L+ GL  K  I  A  +  ++ + G +PN+VTC  ++K LC +G
Sbjct: 554 VIQRG-CILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 612

Query: 228 QIGNASSLFDVLLL------VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            I  A  L   +L       +  KPN +++S +I+  CK  + ++A +L+  M  + ++P
Sbjct: 613 NIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP 672

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+I Y+ LI G  ++G+ K+   L    +D G++ DV  FS ++D     G V  A +  
Sbjct: 673 DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELL 732

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + M+  G +PN ++Y+ L+KGLC   R+ EA  LF ++      P ++TY +L+ G C++
Sbjct: 733 EVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQT 792

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
           G ++    L+  M+                G  G   +           P++  ++ ++D
Sbjct: 793 GNIKTALELHKKMLSD-------------TGQYGTNFK-----------PDVISYSIIID 828

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+  R  +  +LF  M    + P+VI++T LI G    G L  A  LF +M+ +G+  
Sbjct: 829 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQL 888

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           + +TYS +IHG  K   I   L  F+ ME N
Sbjct: 889 NAVTYSVMIHGFCKEGQIDKAL--FQKMEAN 917



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 211/444 (47%), Gaps = 44/444 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+N L     +         +++RG++P+IVT                        
Sbjct: 12  TFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVT------------------------ 47

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                +P+V T S LI+  CKE K+ +A +L  +M++   + D++ YS LI GL    R+
Sbjct: 48  --YSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRI 105

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN--GGF----LPNV 353
            E   L ++    G + D + + ++M      G++  A+Q +  MLN  G +     P +
Sbjct: 106 SEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTL 165

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ISYSI+I GLC+  R  EA  LF ++  + + P +++Y+SLI GFC SGK      L++ 
Sbjct: 166 ISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNE 225

Query: 414 MIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M+  G++PD     +LI+     G + +A       V    I ++  ++TL+ G C   R
Sbjct: 226 MLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHR 285

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK-------RGLTP 521
            ++  +LFM M     +PD I +  L++G+   G ++ A+ L  +ML        + + P
Sbjct: 286 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRP 345

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           DV T S +I  L K   +     + ++M + G   DI  Y+ L+  L  E  +  A  LF
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405

Query: 582 GQLTDRGLEPDIITYNTIICGYCS 605
             +   G  PD ITY T++ G C 
Sbjct: 406 MSMQKLGCRPDAITYGTLMKGLCQ 429



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 15/171 (8%)

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLF---MLMG------MYNIKPDVITHTVLIRGIA 499
           L P+ F FN L++  C +KR  + +      M  G       Y+I+PDV T ++LI  + 
Sbjct: 6   LFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILC 65

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G +  A  L   M++RG   D++TYS +I GL     IS    +F  M++ G  PD  
Sbjct: 66  KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 125

Query: 560 IYNVLLNMLIKECNLDAALKLFGQ-LTDRG-----LEPDIITYNTIICGYC 604
            Y  L+  L +  N++ AL+L  + L D G      +P +I+Y+ II G C
Sbjct: 126 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 176



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 9/129 (6%)

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY---------SAIIHGLFKG 536
           PD  T  +LI  + +   ++  +     +++RG  PD++TY         S +I  L K 
Sbjct: 8   PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +     + ++M + G   DI  Y+ L+  L  E  +  A  LF  +   G  PD ITY
Sbjct: 68  GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127

Query: 597 NTIICGYCS 605
            T++ G C 
Sbjct: 128 GTLMKGLCQ 136


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 228/432 (52%), Gaps = 9/432 (2%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C Y  +++G    G +  A  +  ++   GF P+  T   I+  +   G +  A    D 
Sbjct: 113 CSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDH 169

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           L  +G  PNVVT++ LI AF +  KLE+A +L   M E    P+L+ Y++L+D L K   
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 229

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +    +++   ++ G   +V+ F+S++D +   G+V  A +    M+  G  PNV++YS 
Sbjct: 230 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 289

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI GLC+  + +EA  +  ++  R + P   TYS+LI G CK+ K+ +   +   M   G
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 349

Query: 419 LKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL-KRATDT 472
             PD VV S +I+     G + +A +   +  +    P++  +NT++DG C+L K A   
Sbjct: 350 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 409

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           V L  +    ++ PDV+T++ +I G+     L  A  L  +M K G  PDV+TY+ II G
Sbjct: 410 VILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 469

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K   +    ++ + M+R G AP++  Y  L++ L K   +D A ++  ++ + G  P+
Sbjct: 470 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 529

Query: 593 IITYNTIICGYC 604
           ++TYNT++ G C
Sbjct: 530 LVTYNTMVNGLC 541



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 233/493 (47%), Gaps = 36/493 (7%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLC 170
           C Y+ +I  +   G +  ++E+   M   G   +PD      +++ + ++  +       
Sbjct: 113 CSYNIVISGFCNAGDLHAALELLEEMKSAG--FAPDAFTHTPIITAMANAGDLDGAMDHL 170

Query: 171 RAMR-GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           R+M        Y  L+    R   +E A  +  ++ +RG  PN+VT N ++  LC    +
Sbjct: 171 RSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMV 230

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           G A  +   ++  G  PNV+TF++L++ FCK   ++ A +L  +M+   + P+++ YS L
Sbjct: 231 GAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSAL 290

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDGL K+ +  E  E+L     RG+  D   +S+++        +  A Q   RM   G 
Sbjct: 291 IDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 350

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V+ YS +I   C+ G+L+EA     ++  +R  P ++TY+++IDG CK GK+ +   
Sbjct: 351 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQV 410

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + + M + G                              ++P++  ++T+++G C+    
Sbjct: 411 ILEQMQESG-----------------------------DVLPDVVTYSTVINGLCKSDML 441

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  KL   M      PDV+T+T +I G+   G L  A  L   M + G  P+V+TY+ +
Sbjct: 442 VEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTL 501

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I GL K + +     + + M   G  P++  YN ++N L     +  A +L  ++ D   
Sbjct: 502 ISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRA 561

Query: 590 E--PDIITYNTII 600
           E  PD  TY TI+
Sbjct: 562 ECSPDAATYRTIV 574



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 174/352 (49%), Gaps = 8/352 (2%)

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K+AKL  AF  +              ++ L+  L +  + +E  +L  + L    + DV 
Sbjct: 54  KDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVC 113

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            ++ V+  +   GD+  A++  + M + GF P+  +++ +I  +   G L    G    +
Sbjct: 114 SYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHL 170

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
                +P+++TY++LI  F ++ KL +   L + M +RG  P+ V  ++L++ L     +
Sbjct: 171 RSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMV 230

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
           G A     + +     PN+  FN+L+DG C+     D  KL  +M    ++P+V+T++ L
Sbjct: 231 GAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSAL 290

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+        A  +  +M  RG+TPD  TYSA+IHGL K   I     M + M  +G 
Sbjct: 291 IDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 350

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            PD+ +Y+ +++   K   L  A K   ++  +   PD++TYNT+I G C L
Sbjct: 351 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKL 402


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 265/540 (49%), Gaps = 41/540 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I  Y + G++D++  +   M D GI+++  +   +++ L     + +  K+ + M 
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++G  R+G +  AF M R +++ G     +T N +LK  C    I 
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  L+ ++L  G  PN ++ STL++   K  K E+A  L+   +   L  ++I ++ +I
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K GR+ E  ELL    +     D + + ++ D Y  +G +G A    ++M + GF 
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFA 566

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V  ++  I G     +  +   +  ++  R L P+L+TY +LI G+CK G L +  +L
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFI---------- 455
           Y  M+  G+ P+  +CS L++     G + +A     + V + +IP   I          
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686

Query: 456 ----------------FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                           +N ++ G C+  R  D   LF  +      PD  T++ LI G A
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
           + GS+  A  L   ML  GLTP++ITY+++I+GL K   +S  +++F  ++  G++P+  
Sbjct: 747 ASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGI 806

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            YN L++   KE     A KL  ++ + G++P +ITY+ +I G C+       GY +  I
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCT------QGYMEEAI 860



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/561 (25%), Positives = 262/561 (46%), Gaps = 18/561 (3%)

Query: 47  NPTPAIQFFKWTHNCVSSPNIAQLIHVLLQS----DMRDVASHVFDKMVIQFGKTYNFFR 102
           +P  A+  F+   +  S  + AQL+H+L ++    D R + S +       F      +R
Sbjct: 83  DPDAALHLFRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYR 142

Query: 103 LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS 162
            F  S       +  L+  +   G++  ++ +F  M  +G   S     RL++ LV S  
Sbjct: 143 DFTFS----AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGD 198

Query: 163 VGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
            G    +   MR  G    EF    +     R G +  A     ++   G   N+V  + 
Sbjct: 199 PGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHA 258

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM- 277
           ++   C  G   +A  + + L   G  PNVVT++ L+  +CK+ ++E+A ++   M E  
Sbjct: 259 VMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           D+V D + Y ++I+G  + GR+ +   +     D G+ +++ V++++++    +G +   
Sbjct: 319 DIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            +    M + G  P+  SY+ LI G C++G + +A  +   ++   L  + LTY++L+ G
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKG 438

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPN 452
           FC    + D   L+  M+KRG+ P+ + CS L++GL        AL  + +++   L  N
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  FNT+++G C++ R  +  +L   M      PD +T+  L  G    G L +A  L  
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M   G  P V  +++ I G F  K       +   M   G++P++  Y  L+    KE 
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 573 NLDAALKLFGQLTDRGLEPDI 593
           NL  A  L+ ++ + G+ P++
Sbjct: 619 NLHEACNLYFEMVNNGMNPNV 639



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 248/525 (47%), Gaps = 37/525 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    ++G+++E  ++   M D+G+         L+       S+ + +++CR M 
Sbjct: 362 YNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV 421

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G      I++A  +   +++RG  PN ++C+ +L  L   G+  
Sbjct: 422 RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTE 481

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +L+   L  G   NV+TF+T+IN  CK  ++ +A +L + M E+   PD + Y  L 
Sbjct: 482 QALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLF 541

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  K G+L     L+      G    V +F+S +  +       +    +  M   G  
Sbjct: 542 DGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLS 601

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN+++Y  LI G C++G L EAC L+ +++   + P++   S+L+  F K GK+ +   +
Sbjct: 602 PNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLV 661

Query: 411 YDNMIKRGLKPDAVVCSLLIN-------------------------------GLMGDALR 439
              ++   + P   + ++ I+                               G + DA +
Sbjct: 662 LQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA-K 720

Query: 440 FFFQSVR-MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F+S+R    +P+ F +++L+ GC       +   L  +M    + P++IT+  LI G+
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G LS A+ LF ++  +G++P+ ITY+ +I    K    +    + + M   G+ P +
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTV 840

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             Y++L+  L  +  ++ A+KL  Q+ +  ++P+ ITY T+I GY
Sbjct: 841 ITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGY 885



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 143/564 (25%), Positives = 251/564 (44%), Gaps = 77/564 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y  +++ Y  +G  +++  I   +   G  LSP++V    L+        + +  ++ + 
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESLQRKG--LSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313

Query: 173 MRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           M+  G  V     Y  ++NG  ++G +++A  +  ++   G   N+   N ++  LC  G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++     +   +  VG +P+  +++TLI+ +C+E  + KAF++  +M+   L    + Y+
Sbjct: 374 RMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYN 433

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+ G      + +   L    L RG+  + +  S+++D     G   +A+  +   L  
Sbjct: 434 TLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR 493

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD- 406
           G   NVI+++ +I GLC+ GR+ EA  L  ++   R  P  LTY +L DG+CK G+L   
Sbjct: 494 GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553

Query: 407 ----------GFS------------------------LYDNMIKRGLKPDAVVCSLLING 432
                     GF+                        ++  M  RGL P+ V    LI G
Sbjct: 554 THLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAG 613

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF--------MLM 479
                 + +A   +F+ V   + PN+FI + LM  C   +   D   L         M+ 
Sbjct: 614 WCKEGNLHEACNLYFEMVNNGMNPNVFICSALMS-CFYKEGKVDEANLVLQKLVNIDMIP 672

Query: 480 G--MYNIKPDVITH-----------------TVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           G  +  I+ D I+H                  V+I G+   G ++ A  LF  +  +   
Sbjct: 673 GCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFL 732

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD  TYS++IHG     +I     +  +M   G+ P+I  YN L+  L K   L  A+ L
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
           F +L  +G+ P+ ITYNT+I  YC
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYC 816



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 214/417 (51%), Gaps = 16/417 (3%)

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
           H   + R F  + V+ + +L+     GQ+ +A ++FD +  VG +P++ + + L+N   +
Sbjct: 136 HLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQ 195

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
                 A  +Y  M    ++PD    +I+     + GR+ +  E +      GL++++V 
Sbjct: 196 SGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVA 255

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           + +VMD Y G+G    A +  + +   G  PNV++Y++L+KG C+ GR+ EA     + +
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEA-----ERV 310

Query: 381 IRRLEPS------LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           ++ ++ +       + Y  +I+G+C+ G++ D   + + M   G+  +  V + +INGL 
Sbjct: 311 VKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLC 370

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               M +  +   +   + + P+ + +NTL+DG CR        ++  +M    +    +
Sbjct: 371 KLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTL 430

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+  L++G  S  ++  A+ L+F MLKRG+ P+ I+ S ++ GLFK       L+++K  
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              G+A ++  +N ++N L K   +  A +L  ++ +    PD +TY T+  GYC L
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKL 547



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 145/594 (24%), Positives = 252/594 (42%), Gaps = 108/594 (18%)

Query: 75  LQSDMRDVASHV----FDKMV---IQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENY 122
           ++++MRD   HV    ++ M+    + G+     ++ ++ + D G       Y+ LI+ Y
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE-MEDVGMRPDKYSYNTLIDGY 404

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
            R G + ++ E+   M   G+  +      L+      +++    +L   M  +G    E
Sbjct: 405 CREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNE 464

Query: 183 F----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
                L++GL + G  E A ++ ++ + RG   N++T N ++  LC  G++  A  L D 
Sbjct: 465 ISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR 524

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM--------MEM------------- 277
           +  +   P+ +T+ TL + +CK  +L  A  L N M        +EM             
Sbjct: 525 MKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ 584

Query: 278 --------------DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
                          L P+L+ Y  LI G  K G L E   L    ++ G+  +V + S+
Sbjct: 585 WHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSA 644

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNV--------------------------ISYS 357
           +M  +   G V  A     +++N   +P                            + ++
Sbjct: 645 LMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWN 704

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           ++I GLC+ GR+ +A  LF  +  +R  P   TYSSLI G   SG + + FSL D M+  
Sbjct: 705 VIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA 764

Query: 418 GLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
           GL                               PN+  +N+L+ G C+  + +  V LF 
Sbjct: 765 GL------------------------------TPNIITYNSLIYGLCKSGKLSRAVNLFN 794

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            +    I P+ IT+  LI     +G  + A  L  +M++ G+ P VITYS +I+GL    
Sbjct: 795 KLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQG 854

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            +   + +   M  N V P+   Y  L++  IK  N++   KL+ ++  RGL P
Sbjct: 855 YMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 23/349 (6%)

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELL-------------LTALDRGLKLDVVVFSSVMDA 327
           P L+ ++ L+  L +A R  +   LL             L  + R      V F  ++ A
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +   G +  A+  +D M   G  P++ S + L+  L Q G    A  ++GQ+ I  + P 
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
             T + +   +C+ G++       + M   GL+ + V    +++     G   DA R   
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277

Query: 443 QSVRMTLIPNLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              R  L PN+  +  L+ G C   R++ A   VK     G  +I  D + + ++I G  
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG--DIVVDEVAYGMMINGYC 335

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G +  A  +  +M   G+  ++  Y+ +I+GL K   +     + + ME  G+ PD  
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY 395

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            YN L++   +E ++  A ++   +   GL    +TYNT++ G+CSL++
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 109/208 (52%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           ++  ++ GL + G I +A  +   +  + F+P+  T + ++     +G I  A SL DV+
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G  PN++T+++LI   CK  KL +A  L+N +    + P+ I Y+ LID   K G+ 
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKT 821

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +L    ++ G++  V+ +S ++      G +  A++  D+M+     PN I+Y  L
Sbjct: 822 TEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTL 881

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           I G  + G + E   L+ ++ IR L P+
Sbjct: 882 IHGYIKSGNMEEISKLYDEMHIRGLLPT 909


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 263/498 (52%), Gaps = 10/498 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ +++ G I+E++ I   M   G+ L+      ++  +  +  + +   L   M 
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++G L+   +  A  +  ++  R   P+  T + ++  LC +  + 
Sbjct: 409 MAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ + D ++  G KPNV  + TLI A+ +E++ E A +L  +M+   ++PDL  Y+ LI
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL +A +++E   LL+   ++G+K +   + + ++ Y   G++  A + +  ML+ G +
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN + Y+ILIKG C  G  VEA   F  +L + L P +  YS++I    K+GK ++   +
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 411 YDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +   +K G+ PD  + + LI+G    GD   A + + + +   + PN+ ++NTL++G C+
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCK 708

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           L   T   +LF  +   ++ PDV+T++ +I G    G+L+ A  LF +M+ +G++PD   
Sbjct: 709 LGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYI 768

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y  +I G  K  N+   L +F   ++  V   ++ +N L++   K   +  A +LF  + 
Sbjct: 769 YCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMV 827

Query: 586 DRGLEPDIITYNTIICGY 603
           D+ L P+I+TY  +I  Y
Sbjct: 828 DKKLTPNIVTYTILIDAY 845



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 156/605 (25%), Positives = 282/605 (46%), Gaps = 53/605 (8%)

Query: 54  FFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTY--------NFFRLFR 105
           FF W+ + +S+P       +L          H  D M+ +  +T         +  R +R
Sbjct: 106 FFYWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYR 165

Query: 106 DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ 165
           +  G     +   I+ +  +G ++E+  +F      G + +      LM  L+ +N +G 
Sbjct: 166 EFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGL 225

Query: 166 YYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
           ++K+  +M           Y  ++    + G +     M    +++   PN+ T N  + 
Sbjct: 226 FWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG-KMVLSEMEKECKPNLFTYNAFIG 284

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  G +  A  +  +++  G  P+  T++ L++ FCK+ + ++A  ++  M    L P
Sbjct: 285 GLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNP 344

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +   Y+ LIDG  K G ++E   +    + RGLKL+VV +++++      G++ +A+  +
Sbjct: 345 NRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLF 404

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + ML  G  P+  +Y++LI G  +   + +AC L  ++  R+L PS  TYS LI G C S
Sbjct: 405 NEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHS 464

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIF 456
             L+    + D MI+ G+KP+  +   LI   + +     A+      +   ++P+LF +
Sbjct: 465 SDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCY 524

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT-------------------------- 490
           N L+ G CR K+  +   L + MG   IKP+  T                          
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS 584

Query: 491 ---------HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
                    +T+LI+G    G+   A+  F  ML++GL PD+  YSAIIH L K      
Sbjct: 585 SGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKE 644

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            + +F    + GV PD+ +YN L++   KE +++ A +L+ ++   G+ P+I+ YNT+I 
Sbjct: 645 AMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIN 704

Query: 602 GYCSL 606
           G C L
Sbjct: 705 GLCKL 709



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 146/500 (29%), Positives = 248/500 (49%), Gaps = 12/500 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI        + ++ E+   M   G+  +  +   L+   V  +      +L + M 
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513

Query: 175 GKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             G     FC Y  L+ GL R   +E A  +   + ++G  PN  T    +     +G+I
Sbjct: 514 ANGVLPDLFC-YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A   F  +L  G  PN V ++ LI   C      +A   +  M+E  L+PD+  YS +
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I  L K G+ KE   + L  L  G+  DV +++S++  +   GD+ +A Q YD ML+ G 
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            PN++ Y+ LI GLC+ G + +A  LF ++  + L P ++TYS++IDG+CKSG L + F 
Sbjct: 693 NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFK 752

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L+D MI +G+ PD  +  +LI+G      +  AL  F ++ + + + +L  FN+L+D  C
Sbjct: 753 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFC 811

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  +  +  +LF  M    + P+++T+T+LI        +  A  LF  M  R + P+ +
Sbjct: 812 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 871

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY++++    +  N    + +FK ME  G+A D   Y V+ +   KE     ALKL  + 
Sbjct: 872 TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 931

Query: 585 TDRGLEPDIITYNTIICGYC 604
              G++ +   ++ +I   C
Sbjct: 932 LVEGIKLEDDVFDALIFHLC 951



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 38/356 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I +  + GK  E++ +F      G+     L   L+S       + +  +L   M 
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      VY  L+NGL + G +  A  +  ++ ++  VP++VT + I+   C +G + 
Sbjct: 689 HNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLT 748

Query: 231 NASSLFDVLLLVGPKPN----------------------------------VVTFSTLIN 256
            A  LFD ++  G  P+                                  +  F++LI+
Sbjct: 749 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLID 808

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           +FCK  K+ +A +L++ M++  L P+++ Y+ILID   KA  ++E  +L L    R +  
Sbjct: 809 SFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP 868

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           + + ++S++ +Y  IG+  + +  +  M   G   + I+Y ++    C++G+ +EA  L 
Sbjct: 869 NTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLL 928

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            + L+  ++     + +LI   CK  ++     L   M K  L   +  C+ L+ G
Sbjct: 929 NKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 984



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 38/259 (14%)

Query: 100  FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
            F    + S+G     ++ LI+++ + GK+ E+ E+F  M D    L+P++V         
Sbjct: 789  FHEAQQKSVGSLSA-FNSLIDSFCKHGKVIEARELFDDMVDKK--LTPNIV--------- 836

Query: 160  SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
                                 Y  L++   +  ++E A  +   +  R  +PN +T   +
Sbjct: 837  --------------------TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 876

Query: 220  LKRLCINGQIGNA---SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
            L  L  N QIGN     SLF  +   G   + + +  + +A+CKE K  +A +L N  + 
Sbjct: 877  L--LSYN-QIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 933

Query: 277  MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
              +  +  ++  LI  L K  ++    ELL       L L     ++++  +   G+   
Sbjct: 934  EGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDE 993

Query: 337  AVQTYDRMLNGGFLPNVIS 355
            A +    M   G++P  +S
Sbjct: 994  ASKVLGVMQRLGWVPTSLS 1012


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 227/426 (53%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           ++  L+NGL  +  +  A  +  ++++ G  P ++T N ++  LC+NG++ +A  L D +
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G +PN VT+  ++N  CK  +   A +L   M E ++  D + YSI+IDGL K G L
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L      +G K D++ +++++  +   G      +    M+     PNV+++S+L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I    ++G+L EA  L  +++ R + P+ +TY+SLIDGFCK  +L +   + D MI +G 
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD +  ++LING      + D L  F +     +I N   +NTL+ G C+  +     K
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    ++PD++++ +L+ G+   G L  A+ +F ++ K  +  D+  Y  IIHG+ 
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +     +F  +   GV  D   YN++++ L ++ +L  A  LF ++T+ G  PD +
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579

Query: 595 TYNTII 600
           TYN +I
Sbjct: 580 TYNILI 585



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 247/491 (50%), Gaps = 9/491 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
           K D++V++F  M       +     RL S +  +        LC+ M  KG         
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            ++N   R   +  AF    ++++ G+ P+ V  N +L  LC+  ++  A  L D ++ +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G KP ++T +TL+N  C   K+  A  L + M+E    P+ + Y  +++ + K+G+    
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            ELL    +R +KLD V +S ++D     G +  A   ++ M   GF  ++I+Y+ LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C  GR  +   L   ++ R++ P+++T+S LID F K GKLR+   L   M++RG+ P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            +  + LI+G      + +A++     +     P++  FN L++G C+  R  D ++LF 
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M +  +  + +T+  L++G    G L  A  LF +M+ R + PD+++Y  ++ GL    
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +   L +F  +E++ +  DI IY ++++ +     +D A  LF  L  +G++ D   YN
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547

Query: 598 TIICGYCSLNS 608
            +I   C  +S
Sbjct: 548 IMISELCRKDS 558



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 239/451 (52%), Gaps = 9/451 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYE 182
           ++ E++E+   M +MG   +   +  L++ L  +  V     L   M   GF      Y 
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            ++N + + G    A  + R++ +R    + V  + I+  LC +G + NA +LF+ + + 
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G K +++T++TLI  FC   + +   +L   M++  + P+++ +S+LID   K G+L+E 
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           ++LL   + RG+  + + ++S++D +     +  A+Q  D M++ G  P++++++ILI G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C+  R+ +   LF ++ +R +  + +TY++L+ GFC+SGKL     L+  M+ R ++PD
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V   +L++GL     +  AL  F +  +  +  ++ I+  ++ G C   +  D   LF 
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            + +  +K D   + ++I  +  + SLS A +LF +M + G  PD +TY+ +I       
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           + +    + + M+ +G   D++   +++NML
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMVINML 623



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 209/421 (49%), Gaps = 9/421 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----Y 181
           GK+ ++V +   M + G   +      +++ +  S       +L R M  +   +    Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +++GL + G ++NAF++  ++  +GF  +I+T N ++   C  G+  + + L   ++ 
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
               PNVVTFS LI++F KE KL +A QL   MM+  + P+ I Y+ LIDG  K  RL+E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             +++   + +G   D++ F+ +++ Y     +   ++ +  M   G + N ++Y+ L++
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G CQ G+L  A  LF +++ RR+ P +++Y  L+DG C +G+L     ++  + K  ++ 
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D  +  ++I+G+     + DA   F       +  +   +N ++   CR    +    LF
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M      PD +T+ +LIR        ++A  L  +M   G   DV T   +I+ L  G
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626

Query: 537 K 537
           +
Sbjct: 627 E 627



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 70/326 (21%), Positives = 158/326 (48%), Gaps = 4/326 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I+   + G +D +  +F  M   G          L+    ++       KL R M 
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325

Query: 175 GK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        +  L++  +++G +  A  + ++++QRG  PN +T N ++   C   ++ 
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + D+++  G  P+++TF+ LIN +CK  +++   +L+  M    ++ + + Y+ L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  ++G+L+   +L    + R ++ D+V +  ++D     G++ +A++ + ++      
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            ++  Y I+I G+C   ++ +A  LF  + ++ ++     Y+ +I   C+   L     L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD 436
           +  M + G  PD +  ++LI   +GD
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGD 591



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 159/358 (44%), Gaps = 12/358 (3%)

Query: 95  GKTYNFFRLFRD-SLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           G   N F LF +  +  F  D   Y+ LI  +   G+ D+  ++   M    I  SP++V
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI--SPNVV 334

Query: 151 --QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQV 204
               L+   V    + +  +L + M  +G       Y  L++G  ++  +E A  M   +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           I +G  P+I+T N ++   C   +I +   LF  + L G   N VT++TL+  FC+  KL
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E A +L+  M+   + PD++ Y IL+DGL   G L++  E+        ++LD+ ++  +
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +        V  A   +  +   G   +  +Y+I+I  LC++  L +A  LF ++     
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            P  LTY+ LI              L + M   G   D     ++IN L    L   F
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSF 632


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 276/539 (51%), Gaps = 20/539 (3%)

Query: 90  MVIQFGKTYNFFRL-----FRDSLGDFGC------DYSFLIENYVRIGKIDESVEIFAYM 138
           M+IQ  K  NF ++      R SL  + C       Y   + N +   K++E++++F  M
Sbjct: 1   MMIQRLKASNFTQIIDKGTLRISLLHYSCISEAKVSYKERLRNGIVDIKVNEAIDLFESM 60

Query: 139 SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL----RKGVI 194
                  S     +L S +            C+ M   G     + MN ++    RK  +
Sbjct: 61  IQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKL 120

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
             AF +  + ++ GF PN +T + ++   C+ G++  A +L D ++ +  +PNVVT +TL
Sbjct: 121 LFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTL 180

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           IN  C + ++ +A  L + M++     + I Y  +++ + K+G      +L     +R +
Sbjct: 181 INGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSI 240

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
           K  VV +S V+D+    G++  A+  ++ M   G   +V++YS +I GLC  GR  +   
Sbjct: 241 KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAK 300

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           +  +++ R + P+++T+S+LID F K GKL +   LY+ M+ RG+ PD +  S LI+G  
Sbjct: 301 MLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFC 360

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               +G+A +     V     PN+  ++ L++  C+ KR  + ++LF  +    +  D +
Sbjct: 361 KENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV 420

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+  L++G    G L+ A  LF +M+ RG+ P V+TY  ++ GL     +   L +F+ M
Sbjct: 421 TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM 480

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +++ +   I IYN++++ +     +D A  LF  L+ +G++PD++TYN +I G C   S
Sbjct: 481 QKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGS 539



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 220/426 (51%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NG   +G +  A  +  ++++  + PN+VT N ++  LC+ G++  A  L D +
Sbjct: 141 TFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRM 200

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G + N +T+  ++N  CK      A  L+  M E  +   ++ YSI+ID L K G L
Sbjct: 201 VKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNL 260

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   L      +G+K DVV +SS++      G      +    M+    +PNV+++S L
Sbjct: 261 DDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSAL 320

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I    ++G+L+EA  L+ +++ R + P  +TYSSLIDGFCK  +L +   + D M+ +G 
Sbjct: 321 IDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGC 380

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +P+ V  S+LIN       + + +R F +     L+ +   +NTL+ G C+  +     +
Sbjct: 381 EPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKE 440

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    + P V+T+ +L+ G+   G L  A+ +F +M K  +   +  Y+ IIHG+ 
Sbjct: 441 LFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMC 500

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +     +F  +   GV PD+  YNV++  L K+ +L  A  LF ++ + G  P   
Sbjct: 501 NASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDC 560

Query: 595 TYNTII 600
           TYN +I
Sbjct: 561 TYNILI 566



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 238/463 (51%), Gaps = 9/463 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S LI  +   G++ E+V +   M +M    +   V  L++ L     V +   L   M 
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G    E     ++N + + G    A  + R++ +R    ++V  + ++  LC +G + 
Sbjct: 202 KYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLD 261

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A SLF+ + + G K +VV +S++I   C + + +   ++   M+  +++P+++ +S LI
Sbjct: 262 DALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALI 321

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D   K G+L E  EL    + RG+  D + +SS++D +     +G A Q  D M++ G  
Sbjct: 322 DVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCE 381

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN+++YSILI   C+  R+     LF ++  + L    +TY++L+ GFC+SGKL     L
Sbjct: 382 PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M+ RG+ P  V   +L++GL     +  AL  F +  +  +I  + I+N ++ G C 
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCN 501

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +  D   LF  + +  +KPDV+T+ V+I G+  +GSLS A +LF +M + G  P   T
Sbjct: 502 ASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCT 561

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           Y+ +I     G  +   + + + M+  G A D +   +++ ML
Sbjct: 562 YNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVML 604



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 190/362 (52%), Gaps = 5/362 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  +++ L + G +++A  +  ++  +G   ++V  + I+  LC +G+  + + +   ++
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                PNVVTFS LI+ F KE KL +A +LYN M+   + PD I YS LIDG  K  RL 
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E N++L   + +G + ++V +S ++++Y     V   ++ +  + + G + + ++Y+ L+
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLV 426

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
           +G CQ G+L  A  LF +++ R + PS++TY  L+DG C +G+L+    +++ M K  + 
Sbjct: 427 QGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMI 486

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
               + +++I+G+     + DA   F       + P++  +N ++ G C+    ++   L
Sbjct: 487 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADML 546

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M      P   T+ +LIR       + S++ L  +M  RG   D  T   ++  L  
Sbjct: 547 FRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSD 606

Query: 536 GK 537
           G+
Sbjct: 607 GR 608


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/596 (27%), Positives = 281/596 (47%), Gaps = 63/596 (10%)

Query: 58  THNCVSSPNIA-QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS 116
           T  C    ++A  +I    ++ M D A  +F +M   FG                   Y+
Sbjct: 71  TQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIR------------SYN 118

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMR 174
            L+   +   K DE+   F Y   MG  LSP+L     L+          +  +L   M 
Sbjct: 119 SLLNALIESNKWDEAESFFLYFETMG--LSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y  L+N L + G + +A  +  ++ +RG  P++   N ++      G I 
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 236

Query: 231 NASSLFDVLLLVGPK--PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           NAS +++  LL GP   PN+ +++ +IN  CK  K +++F++++ M + +   DL  YS 
Sbjct: 237 NASEIWE-RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG------------- 335
           LI GL  +G L     +     + G+  DVVV++++++ Y+  G +              
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355

Query: 336 -RAVQTYDRMLNGGF--------------LP------NVISYSILIKGLCQQGRLVEACG 374
            R V +Y+ ++ G F              LP      + ++Y +L+ GLC+ G L +A  
Sbjct: 356 CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 415

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           +  +    R +     YSS+I+G C+ G+L +   + D M K G KP+  VC+ +ING  
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               + DALRFF   V     P +  +NTL++G  + +R ++   L   M     KP++I
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+++L+ G+     L  A+ L+ Q L++G  PDV  ++ IIHGL     +   L ++  M
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           ++    P++  +N L+    K  + + A K++  +   G +PDII+YN  + G CS
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCS 651



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 137/571 (23%), Positives = 263/571 (46%), Gaps = 75/571 (13%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKM-- 90
           N++L  LI++N    A  FF +      SPN+     LI +  +    D A  + + M  
Sbjct: 118 NSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWE 177

Query: 91  ------VIQFGKTYN----------FFRLF-----RDSLGDFGCDYSFLIENYVRIGKID 129
                 V  +G   N            +LF     R    D  C Y+ LI+ + + G I 
Sbjct: 178 QGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVAC-YNILIDGFFKKGDIL 236

Query: 130 ESVEIFAYMSDMGIYLSPD------LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
            + EI+  +   G  + P+      ++  L  C     S   ++++ +  RG+    Y  
Sbjct: 237 NASEIWERLLK-GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++GL   G ++ A  +++++ + G  P++V  N +L      G+I     L+ V+   G
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +  VV+++ LI    + AK+++A  ++ L+ E D   D + Y +L+ GL K G L +  
Sbjct: 356 CR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKAL 414

Query: 304 ELLLTALDRGLKLDVVVFSS-----------------------------------VMDAY 328
            +L  A +    LD   +SS                                   V++ +
Sbjct: 415 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGF 474

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
           V    +  A++ +  M++ G  P V++Y+ LI GL +  R  EA  L  ++L +  +P++
Sbjct: 475 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNM 534

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +TYS L++G C+  KL    +L+   +++G KPD  + +++I+GL     + DAL+ + +
Sbjct: 535 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 594

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
             +   +PNL   NTLM+G  +++      K++  +  Y  +PD+I++ + ++G+ S   
Sbjct: 595 MKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHR 654

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +S A+      + RG+ P  IT++ ++  + 
Sbjct: 655 ISDAVGFLNDAVDRGVLPTAITWNILVRAVL 685



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 140/290 (48%), Gaps = 31/290 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    R G++DE   +   M+  G   +P                     +C A  
Sbjct: 432 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP--------------------HVCNA-- 469

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                    ++NG +R   +E+A      ++ +G  P +VT N ++  L    +   A +
Sbjct: 470 ---------VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   +L  G KPN++T+S L+N  C+  KL+ A  L+   +E    PD+ +++I+I GL 
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            +G++++  +L      R    ++V  +++M+ +  + D  RA + +D +L  G  P++I
Sbjct: 581 SSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDII 640

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           SY+I +KGLC   R+ +A G     + R + P+ +T++ L+     +G L
Sbjct: 641 SYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/426 (31%), Positives = 222/426 (52%), Gaps = 5/426 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+  + R         +++Q+   G   N  T N ++   C   ++G A S+   +L +G
Sbjct: 60  LLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLG 119

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +P+  TF+TLI   C E K+ +A QL++ M      PD++ Y  LI+GL K G      
Sbjct: 120 YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAI 179

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
             L +   R  +  VVV+S+++D+      +  A+  +  ML  G  PN  +YS LI GL
Sbjct: 180 RFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGL 239

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C  G   EA  LF  ++ R++ P  LT+++L+D  CK G +     + D MI+  LKPD 
Sbjct: 240 CILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDV 299

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  + L++G      MG  +  F   VR   +P++  + TL++G C+++     + LF  
Sbjct: 300 VTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEE 359

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    + PD +T+  LI G+   G L  AI LF +M+  G  PD++TY  +   L K   
Sbjct: 360 MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHR 419

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           ++  + + K++E   + PDI IY+++++ + +   L+AA  LF +L+ +GL PD+ TY  
Sbjct: 420 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 479

Query: 599 IICGYC 604
           +I G C
Sbjct: 480 MINGLC 485



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 240/473 (50%), Gaps = 10/473 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + LI ++  + ++  +  +   +  +G   S      L+  L     +G+  +L   M G
Sbjct: 93  NILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 152

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF      Y  L+NGL + G    A    R + QR   P +V  + I+  LC + Q+  
Sbjct: 153 EGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTE 212

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A SLF  +L  G  PN  T+S+LI+  C     ++A +L+  M+   ++PD + ++ L+D
Sbjct: 213 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 272

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G + + + ++   +   LK DVV ++S+MD +    ++G+ V  +D M+  G +P
Sbjct: 273 ALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVP 332

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +VISY+ LI G C+   + +A GLF ++  + L P  +TY++LI G C  G+LRD  +L+
Sbjct: 333 SVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 392

Query: 412 DNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M+  G  PD V   +L      N  + +A+          L P++ I++ +MDG CR 
Sbjct: 393 HEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRA 452

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                   LF  +    + PDV T+T++I G+  QG L+ A  LF +M + G +P+  TY
Sbjct: 453 GELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTY 512

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
           + I  G  +       + +F+ M   G + D++   +L+ ML  +  LD ++K
Sbjct: 513 NLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDD-GLDQSVK 564



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 223/419 (53%), Gaps = 5/419 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +   +++ G+ P+  T   +++ LC+ G+IG A  LFD +   G +P+V+T+ TLIN
Sbjct: 108 AFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLIN 167

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK      A +    M + +  P +++YS +ID L K  +L E   L    L +G+  
Sbjct: 168 GLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISP 227

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +   +SS++     +G    A++ +  M++   +P+ ++++ L+  LC++G +V+A  + 
Sbjct: 228 NNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVV 287

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING---- 432
             ++   L+P ++TY+SL+DG C   ++    +++D M+++G  P  +  + LING    
Sbjct: 288 DVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKI 347

Query: 433 -LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
            +M  A+  F +  +  LIP+   +NTL+ G C + R  D + LF  M +Y   PD++T+
Sbjct: 348 QIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTY 407

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L   +     L+ A++L   +    L PD+  YS ++ G+ +   +     +F  +  
Sbjct: 408 RILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS 467

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
            G+ PD+  Y +++N L ++  L  A KLFG++ + G  P+  TYN I  G+   N  L
Sbjct: 468 KGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETL 526



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 252/510 (49%), Gaps = 9/510 (1%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F R+ R        D+S L+ +  R+      + ++  M   GI  +   +  L++    
Sbjct: 42  FNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCH 101

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
            N +G  + +   +   G+      +  L+ GL  +G I  A  +  ++   GF P+++T
Sbjct: 102 LNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLT 161

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
              ++  LC  G    A      +     +P VV +ST+I++ CK+ +L +A  L++ M+
Sbjct: 162 YGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDML 221

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
              + P+   YS LI GL   G  KE   L    + R +  D + F++++DA    G V 
Sbjct: 222 AKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVV 281

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           +A    D M+     P+V++Y+ L+ G C +  + +   +F  ++ +   PS+++Y++LI
Sbjct: 282 KAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLI 341

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI 450
           +G+CK   +     L++ M ++GL PD V  + LI+GL     + DA+  F + V    I
Sbjct: 342 NGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQI 401

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P+L  +  L D  C+  R  + + L  ++   N+ PD+  +++++ G+   G L +A  L
Sbjct: 402 PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDL 461

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F ++  +GL PDV TY+ +I+GL +   ++    +F  M+ NG +P+   YN++    ++
Sbjct: 462 FSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLR 521

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTII 600
                 A++LF ++  RG   D+ T   ++
Sbjct: 522 NNETLRAIQLFQEMLSRGFSIDVSTTTLLV 551


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 243/464 (52%), Gaps = 12/464 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAM---RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVI 205
           L+  L D N   +  +L   M   RG G       Y  ++NG  ++G  + A+  + +++
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            RG +P++VT N I+  LC    +  A  + + ++  G  P+ +T++++++ +C   + +
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 283

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A      M    + PD++ YS+L+D L K GR  E  ++  +   RGLK ++  + +++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
             Y   G +       D M+  G  P+   +SILI    +QG++ +A  +F ++  + L 
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 403

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P+ +TY ++I   CKSG++ D    ++ MI  GL P  +V + LI+GL        A   
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             + +   +  N   FN+++D  C+  R  ++ KLF LM    +KP+VIT+  LI G   
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G +  A+ L   M+  GL P+ +TYS +I+G  K   +   L +FK ME +GV+PDI  
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           YN++L  L +     AA +L+ ++T+ G + ++ TYN I+ G C
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 269/543 (49%), Gaps = 34/543 (6%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDY-SFLIENYVRIGKI--DESVEIFAYMS 139
           A HVFD++ ++ G+  + + L R +L D   D  +  +  Y R+ +   DE         
Sbjct: 34  ARHVFDEL-LRRGRGASIYGLNR-ALADVARDSPAAAVSRYNRMARAGADE--------- 82

Query: 140 DMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGV 193
                ++PDL     L+ C   +  +   +     +  KGF V    +  L+ GL     
Sbjct: 83  -----VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR 137

Query: 194 IENAFHM-HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV---GPKPNVV 249
             +A  +  R++ + G +PN+ + N +LK LC   +   A  L  ++      G  P+VV
Sbjct: 138 TSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVV 197

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           +++T+IN F KE   +KA+  Y+ M++  ++PD++ Y+ +I  L KA  + +  E+L T 
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           +  G+  D + ++S++  Y   G    A+    +M + G  P+V++YS+L+  LC+ GR 
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
           +EA  +F  +  R L+P + TY +L+ G+   G L +   L D M++ G+ PD  V S+L
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377

Query: 430 I-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I      G +  A+  F +  +  L PN   +  ++   C+  R  D +  F  M    +
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            P  I +  LI G+ +      A  L  +ML RG+  + I +++II    K   +     
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +F+LM R GV P++  YN L+N       +D A+KL   +   GL+P+ +TY+T+I GYC
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557

Query: 605 SLN 607
            ++
Sbjct: 558 KIS 560



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 249/493 (50%), Gaps = 13/493 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  + + G  D++   +  M D GI   PD+V    +++ L  + ++ +  ++   
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGIL--PDVVTYNSIIAALCKAQAMDKAMEVLNT 256

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  +++G    G  + A    +++   G  P++VT + ++  LC NG+
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +FD +   G KP + T+ TL+  +  +  L +   L +LM+   + PD  ++SI
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    K G++ +   +      +GL  + V + +V+      G V  A+  +++M++ G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P  I Y+ LI GLC   +   A  L  ++L R +  + + ++S+ID  CK G++ +  
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L++ M++ G+KP+ +  + LING      M +A++     V + L PN   ++TL++G 
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C++ R  D + LF  M    + PD+IT+ ++++G+      ++A  L+ ++ + G   ++
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ I+HGL K K     L MF+ +    +  +   +N++++ L+K    D A  LF  
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 584 LTDRGLEPDIITY 596
            +  GL P+  TY
Sbjct: 677 FSSNGLVPNYWTY 689



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 223/482 (46%), Gaps = 29/482 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y   G+  E++     M   G+   PD+V    LM  L  +    +  K+  +
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGV--EPDVVTYSLLMDYLCKNGRCMEARKIFDS 326

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  P+    + ++      G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  PN VT+  +I   CK  ++E A   +  M++  L P  I+Y+ 
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL    + +   EL+L  LDRG+ L+ + F+S++D++   G V  + + ++ M+  G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNVI+Y+ LI G C  G++ EA  L   ++   L+P+ +TYS+LI+G+CK  ++ D  
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI------------- 455
            L+  M   G+ PD +  ++++ GL        FQ+ R      L++             
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGL--------FQTRRTAAAKELYVRITESGTQIELST 618

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G C+ K   D +++F  + + ++K +  T  ++I  +   G    A  LF    
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 678

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             GL P+  TY  +   +     +     +F  ME NG   D  + N ++  L++   + 
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEIT 738

Query: 576 AA 577
            A
Sbjct: 739 RA 740



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 122/237 (51%), Gaps = 9/237 (3%)

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            + P L TY  LI   C++G+L  GF+   N+IK+G + DA+  + L+ GL  D      
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 443 QSV---RMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG---MYNIKPDVITHTV 493
             +   RMT    IPN+F +N L+ G C   R+ + ++L  +M         PDV+++T 
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I G   +G    A   + +ML RG+ PDV+TY++II  L K + +   + +   M +NG
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
           V PD   YN +L+          A+    ++   G+EPD++TY+ ++   C    C+
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 4/286 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I+++ + G++ ES ++F  M  +G+  +      L++    +  + +  KL   M 
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+NG  +   +E+A  + +++   G  P+I+T N IL+ L    +  
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L+  +   G +  + T++ +++  CK    + A Q++  +  MDL  +   ++I+I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L K GR  E  +L +     GL  +   +  + +  +G G +    Q +  M + G  
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 718

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
            +    + +++ L Q+G +  A      +  +       T S  ID
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 239/445 (53%), Gaps = 10/445 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  +++GL ++G ++ A+  + +++ R   P+ VT N I+  L     +  A  +  V++
Sbjct: 14  YNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMV 73

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           +    PN  T++++++ +C   + EKA  ++  M    + PD++ Y+ L+D L K G+  
Sbjct: 74  M----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCT 129

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  ++  + + RGLK D+  + +++  Y   G +         M+  G   +   ++ILI
Sbjct: 130 EARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILI 189

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
               +Q ++ E   +F ++  + L P+ + Y ++IDG CK G+L D    ++ MI +GL 
Sbjct: 190 CAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLT 249

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ VV + LI+ L        A    F+ +   + PN+  FNT++D  C+  R  ++ KL
Sbjct: 250 PNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKL 309

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F L+G   + PDVIT++ LI G    G +  A+ L   M+  GL PD +TYS +I+G  K
Sbjct: 310 FDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCK 369

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +   L +FK ME NGV PDI  YN++L+ L +     AA +L+ ++T+ G + ++ T
Sbjct: 370 INRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELST 429

Query: 596 YNTIICGYCSLNSCLID-GYFKSQI 619
           YN I+  +   NS ++  G F++ +
Sbjct: 430 YNIILMDFAKTNSLMMHFGCFRTYV 454



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 220/470 (46%), Gaps = 69/470 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+   + G +D++   +  M D  +  SPD V    +++ L  + ++ +  ++   
Sbjct: 14  YNTIIDGLFKEGDVDKAYITYHEMLDRRV--SPDAVTYNSIIAALSKAQAMDRAMEVLTV 71

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           M       Y  +M+G    G  E A  + R++   G  P++VT N ++  LC NG+   A
Sbjct: 72  MVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEA 131

Query: 233 SSLFDVLLLVGPKPNVVTFSTLIN-----------------------------------A 257
             +FD ++  G KP++ T+ TL++                                   A
Sbjct: 132 RKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICA 191

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           + K+ K+++   +++ M +  L P+ + Y  +IDGL K GRL +        +D+GL  +
Sbjct: 192 YTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPN 251

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           VVV++S++ A        +A +    +L+ G  PN++ ++ ++  LC++GR++E+  LF 
Sbjct: 252 VVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFD 311

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
            +    + P ++TYS+LIDG+C +GK+     L   M+  GLKPD+V  S LING     
Sbjct: 312 LLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGY---- 367

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                                     C++ R  D + LF  M    + PD+IT+ +++ G
Sbjct: 368 --------------------------CKINRMEDALALFKEMESNGVNPDIITYNIILHG 401

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           +      ++A  L+ ++ + G   ++ TY+ I+    K  ++ +    F+
Sbjct: 402 LFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFGCFR 451



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 124/226 (54%), Gaps = 3/226 (1%)

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-MGDALRFF 441
           R  P +++Y+++IDG  K G +   +  Y  M+ R + PDAV  + +I  L    A+   
Sbjct: 6   RCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRA 65

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + + + ++PN F +N++M G C   ++   + +F  M    I+PDV+T+  L+  +   
Sbjct: 66  MEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAI 560
           G  + A  +F  M+KRGL PD+ TY  ++HG +  K   V +H +  LM +NG+  D  +
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHG-YASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +N+L+    K+  +D  + +F ++  +GL P+ + Y T+I G C L
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKL 230


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 234/447 (52%), Gaps = 34/447 (7%)

Query: 161 NSVGQYYKLCRAMRGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           ++V  + +L R  R      +EF  ++  L++        ++ +++  RG  PN+V CN 
Sbjct: 68  DAVSLFNRLLR--RNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++   C  G I  A S+F  +L +G  P+ +TF+TL    C + ++++AF  ++ ++ + 
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
              D I Y  LI GL K G  +   +LL       ++ +VV++++++D+   +  V  A 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             +  M++ G  P+V++YS LI G C  G+L +A  LF ++++  ++P + T++ L++ F
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNT 458
           CK GK+++G +++D M+K+G+KP                              N   +N+
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKP------------------------------NFVTYNS 335

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           LMDG C +K       +F  M    + PD+ +++++I G         A+ LF +M ++ 
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           + PDV+TYS++I GL K   IS  L +   M   GV P+I  YN +L+ L K   +D A+
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAI 455

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCS 605
            L  +  D+G +PDI TY+ +I G C 
Sbjct: 456 ALLTKFKDKGFQPDISTYSILIKGLCQ 482



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 262/575 (45%), Gaps = 60/575 (10%)

Query: 19  YCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSD 78
           Y S S T  S+   + A ++   L++ N   PA +F K   + V S +   ++++  + +
Sbjct: 53  YSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKME 112

Query: 79  MRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM 138
            R +  ++ +                        C+   LI  + ++G I  +  +FA +
Sbjct: 113 FRGIKPNLVN------------------------CN--ILINCFCQLGLIPFAFSVFAKI 146

Query: 139 SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVI 194
             MG          L   L     + Q +     +   GF      Y  L++GL + G  
Sbjct: 147 LKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
             A  + ++V      PN+V  N I+  +C    +  A  LF  ++  G  P+VVT+S L
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSAL 266

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I+ FC   KL+ A  L+N M+  ++ PD+  ++IL++   K G++KEG  +    + +G+
Sbjct: 267 ISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
           K + V ++S+MD Y  + +V +A   ++ M  GG  P++ SYSI+I G C+  +  EA  
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
           LF ++  + + P ++TYSSLIDG  KSG++     L D M  RG+               
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP-------------- 432

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
                           PN+  +N+++D  C+  +    + L         +PD+ T+++L
Sbjct: 433 ----------------PNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSIL 476

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I+G+   G L  A  +F  +L +G   DV  Y+ +I G       +  L +   ME NG 
Sbjct: 477 IKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGC 536

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            PD   Y +++  L K+   D A KL  ++  RGL
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 142/266 (53%), Gaps = 9/266 (3%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PN+++ +ILI   CQ G +  A  +F ++L     P  +T+++L  G C  G+++  
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQA 174

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL--MGD--ALRFFFQSVRMTLI-PNLFIFNTLMDG 462
           F  +D ++  G   D +    LI+GL  +G+  A     Q V   L+ PN+ ++NT++D 
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C++K   +   LF  M    I PDV+T++ LI G    G L  AI LF +M+   + PD
Sbjct: 235 MCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD 294

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN--MLIKECNLDAALKL 580
           V T++ +++   K   +  G  +F +M + G+ P+   YN L++   L+KE N   A  +
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN--KAKSI 352

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSL 606
           F  +   G+ PDI +Y+ +I G+C +
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKI 378



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 60/120 (50%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           K + I+++       S   +  A+ LF ++L+R  TP    ++ I+  L K K+    L+
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + + ME  G+ P++   N+L+N   +   +  A  +F ++   G  PD IT+ T+  G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 242/464 (52%), Gaps = 12/464 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAM---RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVI 205
           L+  L D N   +  +L   M   RG G       Y  ++NG  ++G  + A+  + +++
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            RG +P++VT N I+  LC    +  A  + + ++  G  P+ +T++++++ +C   + +
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 283

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A      M    + PD++ YS+L+D L K GR  E  ++  +   RGLK ++  + +++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
             Y   G +       D M+  G  P+   +SILI     QG++ +A  +F ++  + L 
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLN 403

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P+ +TY ++I   CKSG++ D    ++ MI  GL P  +V + LI+GL        A   
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             + +   +  N   FN+++D  C+  R  ++ KLF LM    +KP+VIT+  LI G   
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G +  A+ L   M+  GL P+ +TYS +I+G  K   +   L +FK ME +GV+PDI  
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           YN++L  L +     AA +L+ ++T+ G + ++ TYN I+ G C
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 269/543 (49%), Gaps = 34/543 (6%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDY-SFLIENYVRIGKI--DESVEIFAYMS 139
           A HVFD++ ++ G+  + + L R +L D   D  +  +  Y R+ +   DE         
Sbjct: 34  ARHVFDEL-LRRGRGASIYGLNR-ALADVARDSPAAAVSRYNRMARAGADE--------- 82

Query: 140 DMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGV 193
                ++PDL     L+ C   +  +   +     +  KGF V    +  L+ GL     
Sbjct: 83  -----VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR 137

Query: 194 IENAFHM-HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV---GPKPNVV 249
             +A  +  R++ + G +PN+ + N +LK LC   +   A  L  ++      G  P+VV
Sbjct: 138 TSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVV 197

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           +++T+IN F KE   +KA+  Y+ M++  ++PD++ Y+ +I  L KA  + +  E+L T 
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           +  G+  D + ++S++  Y   G    A+    +M + G  P+V++YS+L+  LC+ GR 
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
           +EA  +F  +  R L+P + TY +L+ G+   G L +   L D M++ G+ PD  V S+L
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377

Query: 430 I-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I      G +  A+  F +  +  L PN   +  ++   C+  R  D +  F  M    +
Sbjct: 378 ICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            P  I +  LI G+ +      A  L  +ML RG+  + I +++II    K   +     
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +F+LM R GV P++  YN L+N       +D A+KL   +   GL+P+ +TY+T+I GYC
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557

Query: 605 SLN 607
            ++
Sbjct: 558 KIS 560



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 248/493 (50%), Gaps = 13/493 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  + + G  D++   +  M D GI   PD+V    +++ L  + ++ +  ++   
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGIL--PDVVTYNSIIAALCKAQAMDKAMEVLNT 256

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  +++G    G  + A    +++   G  P++VT + ++  LC NG+
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +FD +   G KP + T+ TL+  +  +  L +   L +LM+   + PD  ++SI
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI      G++ +   +      +GL  + V + +V+      G V  A+  +++M++ G
Sbjct: 377 LICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P  I Y+ LI GLC   +   A  L  ++L R +  + + ++S+ID  CK G++ +  
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L++ M++ G+KP+ +  + LING      M +A++     V + L PN   ++TL++G 
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C++ R  D + LF  M    + PD+IT+ ++++G+      ++A  L+ ++ + G   ++
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ I+HGL K K     L MF+ +    +  +   +N++++ L+K    D A  LF  
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 584 LTDRGLEPDIITY 596
            +  GL P+  TY
Sbjct: 677 FSSNGLVPNYWTY 689



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 223/482 (46%), Gaps = 29/482 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y   G+  E++     M   G+   PD+V    LM  L  +    +  K+  +
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGV--EPDVVTYSLLMDYLCKNGRCMEARKIFDS 326

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  P+    + ++      G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGK 386

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  PN VT+  +I   CK  ++E A   +  M++  L P  I+Y+ 
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL    + +   EL+L  LDRG+ L+ + F+S++D++   G V  + + ++ M+  G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNVI+Y+ LI G C  G++ EA  L   ++   L+P+ +TYS+LI+G+CK  ++ D  
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI------------- 455
            L+  M   G+ PD +  ++++ GL        FQ+ R      L++             
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGL--------FQTRRTAAAKELYVRITESGTQIELST 618

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G C+ K   D +++F  + + ++K +  T  ++I  +   G    A  LF    
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 678

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             GL P+  TY  +   +     +     +F  ME NG   D  + N ++  L++   + 
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEIT 738

Query: 576 AA 577
            A
Sbjct: 739 RA 740



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 122/237 (51%), Gaps = 9/237 (3%)

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            + P L TY  LI   C++G+L  GF+   N+IK+G + DA+  + L+ GL  D      
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 443 QSV---RMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG---MYNIKPDVITHTV 493
             +   RMT    IPN+F +N L+ G C   R+ + ++L  +M         PDV+++T 
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I G   +G    A   + +ML RG+ PDV+TY++II  L K + +   + +   M +NG
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
           V PD   YN +L+          A+    ++   G+EPD++TY+ ++   C    C+
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 4/286 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I+++ + G++ ES ++F  M  +G+  +      L++    +  + +  KL   M 
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+NG  +   +E+A  + +++   G  P+I+T N IL+ L    +  
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L+  +   G +  + T++ +++  CK    + A Q++  +  MDL  +   ++I+I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L K GR  E  +L +     GL  +   +  + +  +G G +    Q +  M + G  
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 718

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
            +    + +++ L Q+G +  A      +  +       T S  ID
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 260/504 (51%), Gaps = 30/504 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  Y ++ +IDE+ ++   M   G  L P+L+    +++ L     + +   +   
Sbjct: 241 YNTVIGAYCKLKRIDEAFKLLRSMGLEG--LEPNLLTYNMVINGLCRVGRIEETSGVLAE 298

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KGF      Y  L+NG  + G    A  +H ++++ G  P++VT   ++  +C  G 
Sbjct: 299 MDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGN 358

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A   FD + + G +PN VT+++LIN F ++  +++A+++++ M+     P ++ Y+ 
Sbjct: 359 LNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNA 418

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L++G   +GR++E   LL     +GL  DVV +S+++  +    ++ RA Q    M+  G
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ I+YS LI+GLC+Q RL EAC LF ++L + L P   TY+SLI+G+CK G L +  
Sbjct: 479 VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEAL 538

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+D MIK+G  PD V  ++LINGL       +A R   +      IPN   ++TL++ C
Sbjct: 539 NLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESC 598

Query: 464 C--RLKRATDTVKLFMLMGMY-------------NIKPDVITHTVLIRGIASQGSLSSAI 508
                K     +K F + G+              N KP+   + V+I G    G++  A 
Sbjct: 599 SDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAH 658

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLF-KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
            L+ +M+  G  P  +T  A++  L+ +G +  + L +  ++ R+    D  +   L+ +
Sbjct: 659 KLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDIL-RSCKLSDAELSKALVQI 717

Query: 568 LIKECNLDAALKLFGQLTDRGLEP 591
             KE N+DA   L  ++   G  P
Sbjct: 718 NHKEGNIDAVFNLLTEMAKDGFLP 741



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 217/422 (51%), Gaps = 20/422 (4%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           I+ AF + R +   G  PN++T N ++  LC  G+I   S +   +   G  P+ VT++T
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L+N +CK     +A  L++ M+   L PD++ Y+ LI+ + KAG L    E       RG
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L+ + V ++S+++ +   G +  A + +D M+  GF P +++Y+ L+ G C  GR+ EA 
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAI 433

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           GL   +  + L P +++YS++I GFC+  +L   F +   M+++G+ PDA+  S LI GL
Sbjct: 434 GLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGL 493

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                + +A   F + +  +L+P+ F + +L++G C+     + + L   M      PD 
Sbjct: 494 CEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDT 553

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH-----------GLFKG- 536
           +T+ VLI G+  Q     A  L  ++      P+ ITY  +I             L KG 
Sbjct: 554 VTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGF 613

Query: 537 ---KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
                ++    +F+ M +    P+ A+YNV+++   ++ N+  A KL+ ++ D G  P  
Sbjct: 614 CMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHT 673

Query: 594 IT 595
           +T
Sbjct: 674 VT 675



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 215/418 (51%), Gaps = 41/418 (9%)

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           RK VI  A  ++R++I  G   N+ + N +++  C  G +      F+ +      PNVV
Sbjct: 181 RKPVI-FAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVV 239

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           T++T+I A+CK  ++++AF+L   M    L P+L+ Y+++I+GL + GR++E + +L   
Sbjct: 240 TYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVL-AE 298

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           +DR                                   GF P+ ++Y+ L+ G C+ G  
Sbjct: 299 MDRK----------------------------------GFAPDGVTYNTLVNGYCKVGNF 324

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  L  ++L   L P ++TY+SLI+  CK+G L      +D M  RGL+P+ V  + L
Sbjct: 325 HQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSL 384

Query: 430 IN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           IN     G M +A R + + +R    P +  +N L++G C   R  + + L   M    +
Sbjct: 385 INGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGL 444

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PDV++++ +I G      L  A  +  +M+++G++PD ITYS++I GL + + ++    
Sbjct: 445 SPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACD 504

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +F+ M    + PD   Y  L+N   KE +L+ AL L  ++  +G  PD +TYN +I G
Sbjct: 505 LFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLING 562



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 226/461 (49%), Gaps = 24/461 (5%)

Query: 168 KLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
           K+ R M   G  +    Y  L+ G    G +E       ++ +   +PN+VT N ++   
Sbjct: 189 KVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAY 248

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C   +I  A  L   + L G +PN++T++ +IN  C+  ++E+   +   M      PD 
Sbjct: 249 CKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDG 308

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + Y+ L++G  K G   +   L    L  GL  DVV ++S+++     G++ RA++ +D+
Sbjct: 309 VTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQ 368

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M   G  PN ++Y+ LI G  Q+G + EA  ++ +++     P+++TY++L++G C SG+
Sbjct: 369 MHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGR 428

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           + +   L   M  +GL PD V  S +I G      +  A +   + V   + P+   +++
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSS 488

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+ G C  +R  +   LF  M   ++ PD  T+T LI G   +G L+ A+ L  +M+K+G
Sbjct: 489 LIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN-----------M 567
             PD +TY+ +I+GL K         +   +  +   P+   Y+ L+             
Sbjct: 549 FLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVA 608

Query: 568 LIK----ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           LIK    +  ++ A ++F  +  R  +P+   YN II G+C
Sbjct: 609 LIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHC 649



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 226/517 (43%), Gaps = 85/517 (16%)

Query: 67  IAQLIHVLLQSDMRDVASH--VFDKMVIQFGKTYNFFR-------LFRDSLGDFGCDYSF 117
           I +   VL + D +  A     ++ +V  + K  NF +       + R+ L      Y+ 
Sbjct: 289 IEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTS 348

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI    + G ++ ++E F  M                                R +R  G
Sbjct: 349 LINTMCKAGNLNRAMEFFDQMH------------------------------VRGLRPNG 378

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y  L+NG  +KG ++ A+ +  ++I+ GF P IVT N +L   C++G++  A  L  
Sbjct: 379 V-TYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLR 437

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +   G  P+VV++ST+I  FC+  +L++AFQ+   M+E  + PD I YS LI GL +  
Sbjct: 438 GMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQR 497

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           RL E  +L    L++ L  D   ++S+++ Y   GD+  A+  +D M+  GFLP+ ++Y+
Sbjct: 498 RLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYN 557

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID---------------GFCKSG 402
           +LI GL +Q R  EA  L  ++      P+ +TY +LI+               GFC  G
Sbjct: 558 VLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKG 617

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            + +   ++++MIKR  KP+  V                              +N ++ G
Sbjct: 618 LMNEADQVFESMIKRNQKPNEAV------------------------------YNVIIHG 647

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            CR        KL+  M  +   P  +T   L++ + S+G      L+   +L+     D
Sbjct: 648 HCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSD 707

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
                A++    K  NI    ++   M ++G  P  A
Sbjct: 708 AELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPSGA 744



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 82/159 (51%), Gaps = 1/159 (0%)

Query: 449 LIPNLFIFNTLMDGCCRLKRATD-TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            +P +  +N ++D   R ++      K++  M    +  +V ++ +LIRG  + G+L   
Sbjct: 163 FMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMG 222

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           +  F +M +    P+V+TY+ +I    K K I     + + M   G+ P++  YN+++N 
Sbjct: 223 LRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVING 282

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           L +   ++    +  ++  +G  PD +TYNT++ GYC +
Sbjct: 283 LCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKV 321


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 261/504 (51%), Gaps = 19/504 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSD-MGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCR 171
           Y+ L++      + +E+ E+   M D      SPD+V    +++   +   V + Y L  
Sbjct: 158 YNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFL 217

Query: 172 AMR-GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            M        Y  +++GL +   ++ A  + +Q++++G  PN VT N I+  LC   ++ 
Sbjct: 218 EMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVD 277

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F  ++  G KP+ VT++T+I+  CK   +++A  ++  M++  + PD + Y+ +I
Sbjct: 278 MAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTII 337

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL KA  + +   +    +D+G+K D + ++ ++D       V RA   + +M++ G  
Sbjct: 338 DGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVK 397

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN  +Y+ LI G    G+  E      ++    LEP + TY  L+D  CK+GK  +  SL
Sbjct: 398 PNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSL 457

Query: 411 YDNMIKRGLKPDAVVCSLLINGL--------MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           +D+MI++G+KP   +  ++++G         M D L      V   + PN  IFNT++  
Sbjct: 458 FDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLM---VANGISPNHRIFNTVI-- 512

Query: 463 CCRLKRA--TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           C   KRA   + + +F+ M    + P+V+T+  LI  +   G +  A+L F QM+  G+T
Sbjct: 513 CAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVT 572

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+ + ++++++GL           +F  M   G+ PDI  +N +L  L KE  +  A +L
Sbjct: 573 PNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRL 632

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
              +   GL+PD+I+YNT+I G+C
Sbjct: 633 IDSMVCMGLKPDVISYNTLIDGHC 656



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 268/524 (51%), Gaps = 19/524 (3%)

Query: 100 FFRLFRDSLGDFG---CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
           F R+ RD         C YS +I  + RIG+++     F  +   G  +   +V +L+  
Sbjct: 69  FNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKG 128

Query: 157 LVDSNSVGQ-YYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENA---FHMHRQVIQRG 208
           L D+  VG+  + L R M   G       Y  L+ GL  +   E A    HM        
Sbjct: 129 LCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSS 188

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             P++V+ N ++      GQ+  A SLF   L +G  P+VVT++T+I+  CK  ++++A 
Sbjct: 189 CSPDVVSYNIVINGFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAE 245

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            ++  M+E  + P+ + Y+ +IDGL KA  +     +    +D+G+K   V +++++D  
Sbjct: 246 DVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGL 305

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
                V RA   + +M++ G  P+ ++Y+ +I GLC+   + +A G+F Q++ + ++P  
Sbjct: 306 CKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDN 365

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQ 443
           LTY+ +IDG CK+  +     ++  MI +G+KP+    + LI+G +      + ++   +
Sbjct: 366 LTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKE 425

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                L P++F +  L+D  C+  +  +   LF  M    IKP V  + +++ G   +G+
Sbjct: 426 MSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGA 485

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           LS    L   M+  G++P+   ++ +I    K   I   +H+F  M++ G++P++  Y  
Sbjct: 486 LSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT 545

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++ L K   +D A+  F Q+ + G+ P+ + +N+++ G C+++
Sbjct: 546 LIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVD 589



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 254/501 (50%), Gaps = 16/501 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  +   G++D++  +F    +MG+  SPD+V    ++  L  +  V +   + + 
Sbjct: 196 YNIVINGFFNEGQVDKAYSLFL---EMGV--SPDVVTYNTIIDGLCKAQEVDRAEDVFQQ 250

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  +++GL +   ++ A  + ++++ +G  P+ VT N I+  LC    
Sbjct: 251 MVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQA 310

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  ++  G KP+ VT++T+I+  CK   ++KA  ++  M++  + PD + Y+I
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +IDGL KA  +     +    +D+G+K +   ++ ++  Y+  G     VQ    M    
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V +Y +L+  LC+ G+  EA  LF  ++ + ++PS+  Y  ++ G+ K G L +  
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 409 SLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L + M+  G+ P+      V+C+     ++ + +  F +  +  L PN+  + TL+D  
Sbjct: 491 DLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+L R  D V  F  M    + P+ +    L+ G+ +         LF +ML +G+ PD+
Sbjct: 551 CKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDI 610

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + ++ ++  L K   +     +   M   G+ PD+  YN L++       +D A+KL   
Sbjct: 611 VFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG 670

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           +   GL+P+I++YNT++ GYC
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYC 691



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 158/581 (27%), Positives = 276/581 (47%), Gaps = 29/581 (4%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
           N I+  L K      A   F+        PN      +I  L ++   D+A  VF KMV 
Sbjct: 229 NTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVD 288

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +  K  N               Y+ +I+   +   +D +  +F  M D G+   PD V  
Sbjct: 289 KGVKPSNV-------------TYNTIIDGLCKAQAVDRAEGVFQQMIDRGV--KPDHVTY 333

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             ++  L  + ++ +   + + M  KG       Y  +++GL +   ++ A  + +Q+I 
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G  PN  T N ++      GQ          +     +P+V T+  L++  CK  K  +
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  L++ M+   + P + IY I++ G  K G L E ++LL   +  G+  +  +F++V+ 
Sbjct: 454 ARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVIC 513

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           AY     +   +  + +M   G  PNV++Y  LI  LC+ GR+ +A   F Q++   + P
Sbjct: 514 AYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTP 573

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFF 441
           + + ++SL+ G C   K      L+  M+ +G++PD      V+C+L   G + +A R  
Sbjct: 574 NNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLI 633

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
              V M L P++  +NTL+DG C   R  + VKL   M    +KP+++++  L+ G    
Sbjct: 634 DSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKA 693

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G + +A  LF +ML++G+TP V TY+ I++GLF+    S    ++  M ++     I  Y
Sbjct: 694 GRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTY 753

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +++L+   K    D A K+F  L    L+ DIIT+N +I G
Sbjct: 754 SIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDG 794



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 262/542 (48%), Gaps = 26/542 (4%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           +I  L ++   D A  VF +M+ +  K  N         G + C    LI  Y+  G+ +
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNN---------GTYNC----LIHGYLSTGQWE 417

Query: 130 ESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEF 183
           E V+    MS     L PD+     L+  L  +    +   L  +M  KG      +Y  
Sbjct: 418 EVVQRIKEMSAHD--LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGI 475

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++G  +KG +     +   ++  G  PN    N ++        I     +F  +   G
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PNVVT+ TLI+A CK  +++ A   +N M+   + P+ ++++ L+ GL    + ++  
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVE 595

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL L  L++G++ D+V F++V+      G V  A +  D M+  G  P+VISY+ LI G 
Sbjct: 596 ELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGH 655

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C   R+ EA  L   ++   L+P++++Y++L+ G+CK+G++ + + L+  M+++G+ P  
Sbjct: 656 CFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGV 715

Query: 424 VVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              + ++NGL       +A   +   ++   + ++  ++ ++DG C+     +  K+F  
Sbjct: 716 ETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQS 775

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +   +++ D+IT  ++I G+   G    A+ LF  +   GL P V+TY  I   L +  +
Sbjct: 776 LCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGS 835

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F +ME++G AP+  + N L+  L+    +  A     +L ++    +  T + 
Sbjct: 836 LEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSM 895

Query: 599 II 600
           +I
Sbjct: 896 LI 897



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 198/376 (52%), Gaps = 18/376 (4%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+  T+S +I  FC+  +LE  F  + L+++     D I+ + L+ GL    R+ E   +
Sbjct: 82  PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141

Query: 306 LLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYD---RMLNG---GFLPNVISYSI 358
           LL  +   G +L VV +++++    G+ D  RA +  +    M++G      P+V+SY+I
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLK---GLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNI 198

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +I G   +G++ +A  LF ++ +    P ++TY+++IDG CK+ ++     ++  M+++G
Sbjct: 199 VINGFFNEGQVDKAYSLFLEMGV---SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG 255

Query: 419 LKPDAVVCSLLINGLMG----DALRFFFQS-VRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           +KP+ V  + +I+GL      D     FQ  V   + P+   +NT++DG C+ +      
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAE 315

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +F  M    +KPD +T+  +I G+    ++  A  +F QM+ +G+ PD +TY+ II GL
Sbjct: 316 GVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K +++     +F+ M   GV P+   YN L++  +     +  ++   +++   LEPD+
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435

Query: 594 ITYNTIICGYCSLNSC 609
            TY  ++   C    C
Sbjct: 436 FTYGLLLDYLCKNGKC 451



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 201/398 (50%), Gaps = 22/398 (5%)

Query: 226 NGQIG--NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL----YNLMME--- 276
           +G +G  +A  LFD LLL     +V   + L++   + AK   + +L    +N M+    
Sbjct: 19  SGNLGLHDALKLFDELLLHARPASVRALNQLLSVVSR-AKCSSSSKLAVSRFNRMLRDCS 77

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             + PD   YSI+I    + GRL+ G       L  G ++D +V + ++        VG 
Sbjct: 78  NKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGE 137

Query: 337 AVQTYDR-MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR---LEPSLLTYS 392
           A+    R M   G    V+SY+ L+KGLC + R  EA  L   ++  +     P +++Y+
Sbjct: 138 AMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYN 197

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM 447
            +I+GF   G++   +SL+  M   G+ PD V  + +I+GL     +  A   F Q V  
Sbjct: 198 IVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEK 254

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            + PN   +NT++DG C+ +       +F  M    +KP  +T+  +I G+    ++  A
Sbjct: 255 GVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRA 314

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             +F QM+ RG+ PD +TY+ II GL K + I     +F+ M   GV PD   Y ++++ 
Sbjct: 315 EGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDG 374

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L K  ++D A  +F Q+ D+G++P+  TYN +I GY S
Sbjct: 375 LCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLS 412



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 12/289 (4%)

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLCRAMRGK 176
           N  + G++ E+  +   M  MG  L PD++    + L+D    ++ + +  KL   M   
Sbjct: 619 NLCKEGRVMEARRLIDSMVCMG--LKPDVIS--YNTLIDGHCFASRMDEAVKLLDGMVSA 674

Query: 177 GF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G       Y  L++G  + G I+NA+ + R+++++G  P + T N IL  L  +G+   A
Sbjct: 675 GLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEA 734

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             L+  ++      ++ T+S +++ FCK    ++AF+++  +  MDL  D+I ++I+IDG
Sbjct: 735 RELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDG 794

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           LFK GR ++  +L       GL   VV +  + +  +  G +      +  M   G  PN
Sbjct: 795 LFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPN 854

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
               + LI+ L  +G +  A     ++  +       T S LI  F + 
Sbjct: 855 SHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/416 (22%), Positives = 183/416 (43%), Gaps = 32/416 (7%)

Query: 39  LANLIKTNNPTPAIQFFKWTHNCVSSPN--IAQLIHVLLQSDMRDVASHVF--------- 87
           L NL+  N  +P  + F  T  C  +    I +++H+ ++   + ++ +V          
Sbjct: 492 LLNLMVANGISPNHRIFN-TVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550

Query: 88  ------DKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
                 D  V+QF +  N      + +      ++ L+     + K ++  E+F  M + 
Sbjct: 551 CKLGRVDDAVLQFNQMIN------EGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQ 604

Query: 142 GIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIE 195
           GI   PD+V    ++  L     V +  +L  +M   G       Y  L++G      ++
Sbjct: 605 GI--RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMD 662

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  +   ++  G  PNIV+ N +L   C  G+I NA  LF  +L  G  P V T++T++
Sbjct: 663 EAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N   +  +  +A +LY  M++   +  +  YSI++DG  K     E  ++  +     L+
Sbjct: 723 NGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQ 782

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           LD++ F+ ++D     G    A+  +  +   G +P+V++Y ++ + L ++G L E   L
Sbjct: 783 LDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCL 842

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           F  +      P+    ++LI      G++    +    + ++    +A   S+LI+
Sbjct: 843 FSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLIS 898


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 236/447 (52%), Gaps = 34/447 (7%)

Query: 161 NSVGQYYKLCRAMRGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           ++V  + +L R  R      +EF  ++  L++        ++ +++  RG  PN+V CN 
Sbjct: 68  DAVSLFNRLLR--RNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++   C  G I  A S+F  +L +G  P+ +TF+TLI   C + ++++AF  ++ ++ + 
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
              D I Y  LI GL K G  +   +LL       ++ +VV++++++D+   +  V  A 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             +  M++ G  P+V++YS LI G C  G+L +A  LF ++++  ++P + T++ L++ F
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNT 458
           CK GK+++G +++D M+K+G+KP                              N   +N+
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKP------------------------------NFVTYNS 335

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           LMDG C +K       +F  M    + PD+ +++++I G         A+ LF +M ++ 
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           + PDV+TYS++I GL K   IS  L +   M   GV P I  YN +L+ L K   +D A+
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAI 455

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCS 605
            L  +L D+G++P++ TY+ +I G C 
Sbjct: 456 ALLTKLKDKGIQPNMYTYSILIKGLCQ 482



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 268/577 (46%), Gaps = 60/577 (10%)

Query: 19  YCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSD 78
           Y S S T  S+   + A ++   L++ N   PA +F K   + V S +   ++++  + +
Sbjct: 53  YSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKME 112

Query: 79  MRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM 138
            R +  ++ +                        C+   LI  + ++G I  +  +FA +
Sbjct: 113 FRGIKPNLVN------------------------CN--ILINCFCQLGLIPFAFSVFAKI 146

Query: 139 SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVI 194
             MG          L+  L     + Q +     +   GF      Y  L++GL + G  
Sbjct: 147 LKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
             A  + ++V      PN+V  N I+  +C    +  A  LF  ++  G  P+VVT+S L
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSAL 266

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I+ FC   KL  A  L+N M+  ++ PD+  ++IL++   K G++KEG  +    + +G+
Sbjct: 267 ISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
           K + V ++S+MD Y  + +V +A   ++ M  GG  P++ SYSI+I G C+  +  EA  
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
           LF ++  + + P ++TYSSLIDG  KSG++     L D M  RG+ P             
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPP------------- 433

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
                    ++R         +N+++D  C++ +    + L   +    I+P++ T+++L
Sbjct: 434 ---------TIR--------TYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSIL 476

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I+G+   G L  A  +F  +L +G   +V TY+ +I G       +  L +   ME NG 
Sbjct: 477 IKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGC 536

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            PD   Y +++  L K+   D A KL  ++  RG+ P
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 207/420 (49%), Gaps = 40/420 (9%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +++A  +  ++++R   P     NKIL  L  +        L   +   G KPN+V  + 
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LIN FC+   +  AF ++  +++M  VPD I ++ LI GL   G+++             
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQ------------- 172

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
                                 +A   +D+++  GF  + ISY  LI GLC+ G    A 
Sbjct: 173 ----------------------QAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAAL 210

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L  +V    ++P+++ Y+++ID  CK   + + F L+  MI +G+ PD V  S LI+G 
Sbjct: 211 DLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGF 270

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                + DA+  F + +   + P+++ FN L++  C+  +  +   +F +M    IKP+ 
Sbjct: 271 CILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF 330

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+  L+ G      ++ A  +F  M + G+ PD+ +YS +I+G  K K     +++FK 
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           M R  + PD+  Y+ L++ L K   +  AL+L  Q+ DRG+ P I TYN+I+   C ++ 
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQ 450



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 157/334 (47%), Gaps = 44/334 (13%)

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
           K++ + +SS    +    DV  AV  ++R+L     P    ++ ++  L +         
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-- 432
           L  ++  R ++P+L+  + LI+ FC+ G +   FS++  ++K G  PD +  + LI G  
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 433 LMGD------------ALRFFFQSVRM-TLI-------------------------PNLF 454
           L G             AL F F  +   TLI                         PN+ 
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           ++NT++D  C++K   +   LF  M    I PDV+T++ LI G    G L+ AI LF +M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN--MLIKEC 572
           +   + PDV T++ +++   K   +  G  +F +M + G+ P+   YN L++   L+KE 
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           N   A  +F  +   G+ PDI +Y+ +I G+C +
Sbjct: 347 N--KAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 159/554 (28%), Positives = 271/554 (48%), Gaps = 63/554 (11%)

Query: 113 CD-YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMS--CLVD--SNSV 163
           CD YSF  LI+ +    K+  ++  F  ++ +G++  PD+V    L+   C+ D  S ++
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLH--PDVVTFTTLLHGLCVEDRVSEAL 169

Query: 164 GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
             ++++           +  LMNGL R+G I  A  +  ++++ G  P  +T   I+  +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 224 CINGQIGNASSLFDVLLLVGPK-PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           C  G   +A +L   +  V    PNVV +S +I++ CK+ +   A  L+  M E  + PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           L  Y+ +I G   +GR  +  +LL   L+R +  DVV ++++++A+V  G    A + YD
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYD 349

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            ML  G +PN I+Y+ +I G C+Q RL  A  +F  +  +   P + T+++LIDG+C + 
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 409

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFN 457
           ++ DG  L   M +RGL  + V  + LI+G  L+GD   AL    Q +   + P++   N
Sbjct: 410 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 469

Query: 458 TLMDGCCRLKRATDTVKLFMLM----------------------------GMYN------ 483
           TL+DG C   +  D +++F  M                            G+ N      
Sbjct: 470 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 529

Query: 484 ------------IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
                       I PD IT++ +I G+  Q  L  A  +F  M  +  +P+V+T++ +I+
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 589

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G  K   +  GL +F  M R G+  D  IY  L+    K  N++ AL +F ++   G+ P
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP 649

Query: 592 DIITYNTIICGYCS 605
           D IT   ++ G+ S
Sbjct: 650 DTITIRNMLTGFWS 663



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 224/436 (51%), Gaps = 17/436 (3%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM  ++R    +    +++++ ++    +I + N ++K  C   ++  A S F  +  +G
Sbjct: 85  LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG 144

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVTF+TL++  C E ++ +A   ++ M E    P+++ ++ L++GL + GR+ E  
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKG 362
            LL   ++ GL+   + + +++D     GD   A+    +M      +PNV+ YS +I  
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC+ GR  +A  LF ++  + + P L TY+S+I GFC SG+  D   L   M++R + PD
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 423 AVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + LIN  + +     A   + + +   +IPN   +N+++DG C+  R      +F 
Sbjct: 325 VVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 384

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
           LM      PDV T T LI G      +   + L  +M +RGL  + +TY+ +IHG     
Sbjct: 385 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 444

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD----------- 586
           +++  L + + M  +GV PDI   N LL+ L     L  AL++F  +             
Sbjct: 445 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPF 504

Query: 587 RGLEPDIITYNTIICG 602
            G+EPD++TYN +ICG
Sbjct: 505 NGVEPDVLTYNILICG 520



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 248/507 (48%), Gaps = 23/507 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F ++F  +       ++ L+    R G+I E+V +   M + G+  +      ++  +  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 160 SNSVGQYYKLCRAMRG-----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
                    L R M           +Y  +++ L + G   +A ++  ++ ++G  P++ 
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++   C +G+  +A  L   +L     P+VVT++ LINAF KE K  +A +LY+ M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEM 351

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +   ++P+ I Y+ +IDG  K  RL    ++      +G   DV  F++++D Y G   +
Sbjct: 352 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 411

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
              ++    M   G + N ++Y+ LI G C  G L  A  L  Q++   + P ++T ++L
Sbjct: 412 DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 471

Query: 395 IDGFCKSGKLRDGFSLYDNMIK-----------RGLKPDAVVCSLLINGLMG-----DAL 438
           +DG C +GKL+D   ++  M K            G++PD +  ++LI GL+      +A 
Sbjct: 472 LDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAE 531

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             + +     ++P+   +++++DG C+  R  +  ++F+ MG  +  P+V+T   LI G 
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 591

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD- 557
              G +   + LF +M +RG+  D I Y  +I+G  K  NI+  L +F+ M  +GV PD 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQL 584
           I I N+L     KE  L+ A+ +   L
Sbjct: 652 ITIRNMLTGFWSKE-ELERAVAMLEDL 677



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 187/380 (49%), Gaps = 6/380 (1%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  LF  +L   P P+VV F  L+    +  + +    LY  M    +  D+  ++ILI
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILI 121

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
                  +L             GL  DVV F++++        V  A+  + +M      
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCR 181

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV++++ L+ GLC++GR+VEA  L  +++   L+P+ +TY +++DG CK G      +L
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241

Query: 411 YDNMIK-RGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
              M +   + P+ V+ S +I+     G   DA   F +     + P+LF +N+++ G C
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
              R +D  +L   M    I PDV+T+  LI     +G    A  L+ +ML RG+ P+ I
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 361

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+++I G  K   +     MF LM   G +PD+  +  L++       +D  ++L  ++
Sbjct: 362 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 421

Query: 585 TDRGLEPDIITYNTIICGYC 604
             RGL  + +TYNT+I G+C
Sbjct: 422 PRRGLVANTVTYNTLIHGFC 441



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 214/427 (50%), Gaps = 6/427 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L +G      +E+A  +   +++   +P++V   K++  +    +     SL+  +    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + ++ +F+ LI  FC  +KL  A   +  + ++ L PD++ ++ L+ GL    R+ E  
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +      +   + +VV F+++M+     G +  AV   DRM+  G  P  I+Y  ++ G+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 364 CQQGRLVEACGLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           C++G  V A  L  ++  +  + P+++ YS++ID  CK G+  D  +L+  M ++G+ PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 423 -----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
                +++     +G   DA +   + +   + P++  +N L++   +  +  +  +L+ 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYD 349

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I P+ IT+  +I G   Q  L +A  +F+ M  +G +PDV T++ +I G    K
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 409

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I  G+ +   M R G+  +   YN L++      +L+AAL L  Q+   G+ PDI+T N
Sbjct: 410 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 469

Query: 598 TIICGYC 604
           T++ G C
Sbjct: 470 TLLDGLC 476


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 165/619 (26%), Positives = 295/619 (47%), Gaps = 65/619 (10%)

Query: 36  NAILANLIKTNNPTPAIQFF-----KWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKM 90
           N +L + +KT     A+  F     K    C++  NI   +  L++++M   A  V++KM
Sbjct: 158 NYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNI--FLSELVKNNMIREARDVYNKM 215

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
             +  K            GD     S +I   +R GK++E+   F    + G+ L     
Sbjct: 216 ASKGVK------------GDCAT-ISVMIRASMREGKLEEAEGWFREAKNKGVELDARAY 262

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGL----LRKGVIENAFHMHRQVIQ 206
             ++  +           L R MR KG+  +E +   +    +++G +  A  +  +++ 
Sbjct: 263 SIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLS 322

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G   N+V    ++K  C  G + +A  LFD +   G  PN VT++ +I   CK   ++K
Sbjct: 323 CGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDK 382

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A+++YN M   D+ P +   + LI G  KA   +E ++L   A+  G+  +V  ++S++ 
Sbjct: 383 AYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLS 441

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G +  A   +++M+  G  P+V+SY+ +I G CQQG +  A G+F ++L + L+P
Sbjct: 442 WLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKP 501

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL------------- 433
           +L+TYS L+DG+ K G     F LYD M    + P    C+++INGL             
Sbjct: 502 NLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRL 561

Query: 434 ---------------------------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
                                      +  AL  + +  ++ + PN+F +  L++G C+ 
Sbjct: 562 KKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKS 621

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                 +K+   M    I+ DV  +  LI G   +G + +A  L  ++ + GL+P+ + Y
Sbjct: 622 NNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVY 681

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           S++I G  K +N+   LH+ K M   G+  D+ IY  L++ L+KE  L  A +L+ ++  
Sbjct: 682 SSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLA 741

Query: 587 RGLEPDIITYNTIICGYCS 605
           +G+ PD+ITY+ +I G C+
Sbjct: 742 KGIMPDLITYSVLIHGLCN 760



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 256/498 (51%), Gaps = 18/498 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L++ Y + G +D ++E+F  M++ GI  +      ++     + ++ + Y++   M+ K 
Sbjct: 335 LMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKD 394

Query: 178 FCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                F    L+ G L+    E A  +  + +  G + N+ T N +L  LC  G++  A 
Sbjct: 395 ISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG-IANVFTYNSLLSWLCKEGKMSEAC 453

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           S+++ ++  G +P+VV+++ +I   C++  ++ A  ++  M+E  L P+LI YS+L+DG 
Sbjct: 454 SIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGY 513

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV-GIGDVGRAVQTYDRM---LNGGF 349
           FK G      E      DR    ++       +  + G+   GR  ++ DR+   +  GF
Sbjct: 514 FKKG----DTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGF 569

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           +P  ++Y+ +I G  ++G +  A  ++ ++    + P++ TY++LI+GFCKS  +     
Sbjct: 570 IPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALK 629

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           + D M  +G++ D  V   LI+G      M +A +   +   + L PN  ++++++ G  
Sbjct: 630 VMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFR 689

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +L+     + L   M    I  D+  +T LI G+  +G L  A  L+ +ML +G+ PD+I
Sbjct: 690 KLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLI 749

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TYS +IHGL     +     + + M+R  + P + IYN L+    KE NL  A +L  ++
Sbjct: 750 TYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEM 809

Query: 585 TDRGLEPDIITYNTIICG 602
            D+GL PD  TY+ ++ G
Sbjct: 810 LDKGLVPDDTTYDILVNG 827



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 238/468 (50%), Gaps = 8/468 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +IE   + G +D++ EI+  M +  I  +   V  L+   + + S  +  KL     
Sbjct: 367 YAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAV 426

Query: 175 GKGFC---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
             G      Y  L++ L ++G +  A  +  +++++G  P++V+ N ++   C  G + +
Sbjct: 427 ACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDS 486

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A+ +F  +L  G KPN++T+S L++ + K+   E AF LY+ M   ++ P     +I+I+
Sbjct: 487 ANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIIN 546

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL KAGR  E  + L   +  G     + ++ ++D +V  G V  A+  Y  M   G  P
Sbjct: 547 GLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSP 606

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV +Y+ LI G C+   +  A  +  ++  + +E  +  Y +LIDGFC+ G + +   L 
Sbjct: 607 NVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLL 666

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             + + GL P+ VV S +I+G      M  AL    + +   +  +L I+ TL+ G  + 
Sbjct: 667 SELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKE 726

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +     +L+  M    I PD+IT++VLI G+ ++G L +A  +   M ++ +TP V  Y
Sbjct: 727 GKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIY 786

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           + +I G FK  N+     +   M   G+ PD   Y++L+N  +K+ NL
Sbjct: 787 NTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 145/649 (22%), Positives = 277/649 (42%), Gaps = 100/649 (15%)

Query: 16  NKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLL 75
           N  +  +S     D    Q   I   L   N+P  A+ +F W          +Q   ++ 
Sbjct: 46  NTNFPGKSAPTSQDSFLTQTQYIDTLLNHQNDPQSALSYFTWA---------SQKRGLIK 96

Query: 76  QSDMRDVASHVFDKMVIQFGKTYNFF-RLFRDSLG-----------------DFGCD--- 114
             D   V  H+  K     GK  N   R   D  G                 DF  D   
Sbjct: 97  SVDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRV 156

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +++L+ +YV+  +I+++V+ F  +          + + ++ CL                 
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSL----------IEKDIVPCLT---------------- 190

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                V    ++ L++  +I  A  ++ ++  +G   +  T + +++     G++  A  
Sbjct: 191 -----VMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEG 245

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            F      G + +   +S +I A CK+     A  L   M +   VP  +I++ +I    
Sbjct: 246 WFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCM 305

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G++ E  ++    L  G  ++VVV +++M  Y   GD+  A++ +D+M   G  PN +
Sbjct: 306 KQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNV 365

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS--------------------------- 387
           +Y+++I+  C+ G + +A  ++ Q+  + + P+                           
Sbjct: 366 TYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEA 425

Query: 388 -------LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMG 435
                  + TY+SL+   CK GK+ +  S+++ M+++G++P  V  + +I      G M 
Sbjct: 426 VACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMD 485

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
            A   F + +   L PNL  ++ LMDG  +         L+  M   NI P   T  ++I
Sbjct: 486 SANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIII 545

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G+   G  S +     ++++ G  P  +TY+ II G  K  +++  L ++  M + GV+
Sbjct: 546 NGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVS 605

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           P++  Y  L+N   K  N+D ALK+  ++ ++G+E D+  Y  +I G+C
Sbjct: 606 PNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFC 654



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 211/443 (47%), Gaps = 17/443 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+ +L+N  ++   I +A      +I++  VP +   N  L  L  N  I  A  +++ +
Sbjct: 156 VFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKM 215

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G K +  T S +I A  +E KLE+A   +       +  D   YSI+I+ + K    
Sbjct: 216 ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDS 275

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                LL    D+G     V+F+ V+   +  G +  AV+    ML+ G   NV+  + L
Sbjct: 276 VAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTL 335

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +KG C+QG L  A  LF ++    + P+ +TY+ +I+  CK+G +   + +Y+ M  + +
Sbjct: 336 MKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDI 395

Query: 420 KPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P     + LI G +      +A + F ++V    I N+F +N+L+   C+  + ++   
Sbjct: 396 SPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG-IANVFTYNSLLSWLCKEGKMSEACS 454

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           ++  M    ++P V+++  +I G   QG + SA  +F +ML++GL P++ITYS ++ G F
Sbjct: 455 IWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYF 514

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  +      ++  M    +AP     N+++N L K      +     +L   G  P  +
Sbjct: 515 KKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCM 574

Query: 595 TYNTIICGYCSLNSCLIDGYFKS 617
           TYN           C+IDG+ K 
Sbjct: 575 TYN-----------CIIDGFVKE 586



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 217/454 (47%), Gaps = 37/454 (8%)

Query: 44  KTNNPTPAIQFFKWTHNCVSSP---NIAQLIHVLLQSDMRDVASHVFDKMV---IQFGKT 97
           K  N   A + +    N   SP   N+  LI   L++   + AS +FD+ V   I    T
Sbjct: 376 KNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFT 435

Query: 98  YN------------------FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMS 139
           YN                  + ++ R  +      Y+ +I  + + G +D +  +F  M 
Sbjct: 436 YNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEML 495

Query: 140 DMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGV 193
           + G  L P+L+    LM            + L   MRG+     +F    ++NGL + G 
Sbjct: 496 EKG--LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGR 553

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
              +    ++++Q GF+P  +T N I+      G + +A +++  +  +G  PNV T++ 
Sbjct: 554 TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTN 613

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LIN FCK   ++ A ++ + M    +  D+ +Y  LIDG  + G +   ++LL    + G
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG 673

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L  + VV+SS++  +  + ++  A+  + RM+N G   ++  Y+ LI GL ++G+L+ A 
Sbjct: 674 LSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFAS 733

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L+ ++L + + P L+TYS LI G C  G+L +   + ++M ++ + P   + + LI G 
Sbjct: 734 ELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGH 793

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
                + +A R   + +   L+P+   ++ L++G
Sbjct: 794 FKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNG 827



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 152/347 (43%), Gaps = 41/347 (11%)

Query: 98  YNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           Y+  R    +  DF C+   +I    + G+  ES +    +   G   +      ++   
Sbjct: 526 YDRMRGENIAPSDFTCN--IIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGF 583

Query: 158 VDSNSVGQ----YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
           V   SV      Y ++C+         Y  L+NG  +   ++ A  +  ++  +G   ++
Sbjct: 584 VKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDV 643

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
                ++   C  G + NAS L   L  VG  PN V +S++I+ F K   +E A  L+  
Sbjct: 644 TVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKR 703

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M+   +  DL IY+ LI GL K G+L   +EL    L +G+                   
Sbjct: 704 MINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGI------------------- 744

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
                           +P++I+YS+LI GLC +G+L  A  +   +  + + P++  Y++
Sbjct: 745 ----------------MPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNT 788

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRF 440
           LI G  K G L++ F L++ M+ +GL PD     +L+NG + D   F
Sbjct: 789 LITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLF 835


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 219/407 (53%), Gaps = 8/407 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  L+      G++E A  ++ ++     +P +  CN +L  L   G+      ++  +
Sbjct: 128 VFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDM 184

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PNVVT+ TLI+  C++    KAF+L++ M+E  + P ++IY+ILI GL    R+
Sbjct: 185 VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRI 244

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   +  T  + G+  ++  ++++MD Y  I  V +A++ Y  ML  G LPNV+++ IL
Sbjct: 245 SEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGIL 304

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+   +V A      +    + P++  Y+ LIDG+CK+G L +  SL+  + K  +
Sbjct: 305 IDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364

Query: 420 KPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    S+LI GL G     +A     +  +   +PN   +NTL+DG C+       ++
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M    I+P++IT + LI G    G + +A+ L+ +M+ +GL PDV+ Y+A+I G F
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHF 484

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           K  N      + K M+  G+ P++   + L++ L K+  +  A+KLF
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 203/376 (53%), Gaps = 21/376 (5%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNV  F  LI AF +   +E+A  +Y    +MD++P +   ++++DGL K GR     ++
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVY---YKMDVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
               + RG   +VV + +++D     GD  +A + +D M+     P V+ Y+ILI+GLC 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           + R+ EA  +F  +    + P+L TY++++DG+CK   ++    LY  M+  GL P+ V 
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
             +LI+GL     M  A +F        ++PN+F++N L+DG C+    ++ + L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
            + I PDV T+++LI+G+     +  A  L  +M K+G  P+ +TY+ +I G  K  N+ 
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             + +   M   G+ P+I  ++ L++   K   ++AA+ L+ ++  +GL PD++ Y    
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY---- 476

Query: 601 CGYCSLNSCLIDGYFK 616
                  + LIDG+FK
Sbjct: 477 -------TALIDGHFK 485



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 235/476 (49%), Gaps = 41/476 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  LI  +  +G ++E++ ++  M  +    + ++V   +  LV        +K+   M 
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMV---LDGLVKKGRFDTMWKVYGDMV 185

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L++G  R+G    AF +  ++I++   P +V    +++ LC   +I 
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+F  +   G  PN+ T++T+++ +CK A ++KA +LY  M+   L+P+++ + ILI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K   +    + L+     G+  ++ V++ ++D Y   G++  A+  +  +     L
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +YSILIKGLC   R+ EA GL  ++  +   P+ +TY++LIDG+CK G +     +
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M ++G++P                              N+  F+TL+DG C+  +  
Sbjct: 426 CSQMTEKGIEP------------------------------NIITFSTLIDGYCKAGKME 455

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + L+  M +  + PDV+ +T LI G    G+   A  L  +M + GL P+V T S +I
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            GL K   IS  + +F  + + G     +  N L   L + C+L  AL LF  +++
Sbjct: 516 DGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLYQMCSL--ALSLFRGISE 567



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 121/552 (21%), Positives = 243/552 (44%), Gaps = 69/552 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ Y + G + E++ + + +    I   PD+     L+  L   + + +   L + 
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEIL--PDVFTYSILIKGLCGVDRMEEADGLLQE 393

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ KGF      Y  L++G  ++G +E A  +  Q+ ++G  PNI+T + ++   C  G+
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L+  +++ G  P+VV ++ LI+   K+   ++AF+L+  M E  L P++   S 
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC 513

Query: 289 LIDGLFKAGRLKEGNELLL------TALDRGLKLDVVVF---SSVMDAYVGIGDVGRAVQ 339
           LIDGL K GR+ +  +L L      T   +  +LD  ++   S  +  + GI +    V 
Sbjct: 514 LIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVI 573

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQ--GRLVEACG-----LFGQVLIRRLEPSLLTYS 392
              ++      P    ++ L      Q   R +++       LF ++L+R+   S+ ++S
Sbjct: 574 RVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFS 633

Query: 393 SL--IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSV 445
            +  +        L +G  ++  +I  G +P   + + LI+     G + DA   F +  
Sbjct: 634 LMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIP 693

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              LI    + +  +D     +R    ++LF  M M +++PD++T TV +   A  G+L 
Sbjct: 694 SKNLISWTSVISAYVDN----QRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALD 749

Query: 506 SAILLFFQMLKRGLT-----------------------------PDVITYSAIIHGLFKG 536
               +   +  RGL                              P+ +T+  ++      
Sbjct: 750 MGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMACSHA 809

Query: 537 KNISVGLHMFKLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
             +  G   F+ M+ +  + P I+ +  ++++L +   L  A +   ++  R   P+ + 
Sbjct: 810 GLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVR---PNAVV 866

Query: 596 YNTIICGYCSLN 607
           + T++ G CSL 
Sbjct: 867 WRTLL-GACSLQ 877



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 46/275 (16%)

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           R+ +  F PNV  + +LI    + G + EA  ++ ++ +    P++   + ++DG  K G
Sbjct: 118 RLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKG 172

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           +    + +Y +M+ RG  P                              N+  + TL+DG
Sbjct: 173 RFDTMWKVYGDMVARGASP------------------------------NVVTYGTLIDG 202

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           CCR        +LF  M    I P V+ +T+LIRG+  +  +S A  +F  M   G+ P+
Sbjct: 203 CCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPN 262

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           + TY+ ++ G  K  ++   L +++ M  +G+ P++  + +L++ L K   + +A K   
Sbjct: 263 LYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLI 322

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
            +   G+ P+I  YN           CLIDGY K+
Sbjct: 323 DMASFGVVPNIFVYN-----------CLIDGYCKA 346


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 154/606 (25%), Positives = 292/606 (48%), Gaps = 57/606 (9%)

Query: 21  SESKTHISDLQFNQANAILAN---LIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQS 77
           S ++ H   L FN  +  +++   +++   P   + F K         +IA++ H    S
Sbjct: 28  SHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLL------TSIAKMKH---HS 78

Query: 78  DMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAY 137
            +  + SH  D     FG   N + L              LI ++  + ++  +  + A 
Sbjct: 79  TLLSL-SHQMD----SFGIPPNIYTLH------------ILINSFCHLNRVGFAFSVLAK 121

Query: 138 MSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGV 193
           +  +G          L+  +     +G+   L   M G+GF      Y  L+NGL + G 
Sbjct: 122 ILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGN 181

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
              A  +   ++Q+   PN+   N I+  LC + Q+  A +LF  ++  G  P++ T+++
Sbjct: 182 TSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNS 241

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI+A C   + +    L N M++  ++PD++ ++ ++D L K G++ E ++++   + RG
Sbjct: 242 LIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 301

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR----- 368
           ++ +VV ++++MD +  + ++  AV+ +D M+  G +PNVISY+ LI G C+  R     
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAI 361

Query: 369 --------------LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
                         + EA  +F  ++ +   P++++Y++LI+G+CK  ++     L+  M
Sbjct: 362 HYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 421

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            ++ L PD V  S LI+GL     + DA+  F + V  + IPNL  +  L+D  C+ +  
Sbjct: 422 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 481

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            + + L   +   N+ PD+  + + I G+   G L +A  LF  +  +GL PDV TYS +
Sbjct: 482 AEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIM 541

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I+GL +   +     +F+ M+ NG   +  IYN +    ++      A++L  ++  RG 
Sbjct: 542 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 601

Query: 590 EPDIIT 595
             D  T
Sbjct: 602 SADAST 607



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 239/447 (53%), Gaps = 24/447 (5%)

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             L+N       +  AF +  ++++ G  P+  T   +++ +C+ G+IG A  LFD ++ 
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIG 159

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G +P+VVT+ TLIN  CK      A +L   M++ +  P++  Y+ +ID L K  ++ E
Sbjct: 160 EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTE 219

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              L    + +G+  D+  ++S++ A   + +        + M++   +P+V+S++ ++ 
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
            LC++G++ EA  +  +++ R +EP+++TY++L+DG C   ++ +   ++D M+ +G  P
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339

Query: 422 DAVVCSLLINGL------------------------MGDALRFFFQSVRMTLIPNLFIFN 457
           + +  + LING                         M +A++ F   V    +PN+  +N
Sbjct: 340 NVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYN 399

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           TL++G C+++R    + LF  M    + PD +T++ LI G+     L  AI LF +M+  
Sbjct: 400 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 459

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
              P+++TY  ++  L K + ++  + + K +E + + PDI + N+ ++ + +   L+AA
Sbjct: 460 SQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAA 519

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
             LF  L+ +GL+PD+ TY+ +I G C
Sbjct: 520 RDLFSNLSSKGLQPDVWTYSIMINGLC 546



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 133/264 (50%), Gaps = 5/264 (1%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PN+ +  ILI   C   R+  A  +  ++L    +P   T+++LI G C  GK+ + 
Sbjct: 91  GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEA 150

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+D MI  G +PD V    LINGL        A+R     V+    PN+F +NT++D 
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+ ++ T+   LF  M    I PD+ T+  LI  + +         L  +M+   + PD
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V++++ ++  L K   ++    +   M + GV P++  Y  L++       +D A+K+F 
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330

Query: 583 QLTDRGLEPDIITYNTIICGYCSL 606
            +  +G  P++I+YNT+I GYC +
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKI 354



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 1/178 (0%)

Query: 427 SLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           SL  N + G A+  F + +RM   P+   FN L+    ++K  +  + L   M  + I P
Sbjct: 36  SLHFNTIDG-AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP 94

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           ++ T  +LI        +  A  +  ++LK G  PD  T++ +I G+     I   LH+F
Sbjct: 95  NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLF 154

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             M   G  PD+  Y  L+N L K  N  AA++L G +  +  +P++  YNTII   C
Sbjct: 155 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLC 212



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 140/324 (43%), Gaps = 48/324 (14%)

Query: 72  HVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIG 126
           H LL S+M D A  VFD MV +                  GC      Y+ LI  Y +I 
Sbjct: 316 HCLL-SEM-DEAVKVFDTMVCK------------------GCMPNVISYNTLINGYCKIQ 355

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRL---------MSCLVDSNSVGQYY---------- 167
           +ID+++     M     YL+ D   ++         M  ++  N++   Y          
Sbjct: 356 RIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAM 415

Query: 168 ----KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
               ++CR         Y  L++GL     +++A  +  +++    +PN+VT   +L  L
Sbjct: 416 YLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYL 475

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C N  +  A +L   +      P++   +  I+  C+  +LE A  L++ +    L PD+
Sbjct: 476 CKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDV 535

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
             YSI+I+GL + G L E ++L     + G  L+  +++++   ++   +  RA+Q    
Sbjct: 536 WTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQE 595

Query: 344 MLNGGFLPNVISYSILIKGLCQQG 367
           M+  GF  +  + ++ +K L   G
Sbjct: 596 MVARGFSADASTMTLFVKMLSDDG 619



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 54/121 (44%)

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P  +    L+  IA     S+ + L  QM   G+ P++ T   +I+       +     +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
              + + G  PD A +  L+  +  E  +  AL LF ++   G  PD++TY T+I G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 606 L 606
           +
Sbjct: 179 V 179


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 149/559 (26%), Positives = 271/559 (48%), Gaps = 24/559 (4%)

Query: 44  KTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRL 103
           K    T A +  +     VS      L+  L++ D  ++A  V  + V++ G   N + L
Sbjct: 63  KLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH-REVVRSGIELNVYTL 121

Query: 104 FRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
                       + ++    + GK D+     + M   GIY        L+        +
Sbjct: 122 ------------NIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLL 169

Query: 164 GQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            + +++  +M  KG       Y  ++NGL +KG    A  +  +++  G  P+  T N +
Sbjct: 170 EEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           L   C       A  +F  +L  G  P++V+FS+LI  F +   L++A   +  M +  L
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGL 289

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           VPD +IY++L+ G  + G + E  ++    L++G  LDV+ ++++++       +  A +
Sbjct: 290 VPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADK 349

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            +D M+  G LP+  +++ LI G CQ G + +A  LFG +  R ++P ++ Y++LIDGFC
Sbjct: 350 LFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFC 409

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLF 454
           K G++     L+D MI R + P+ +   +LIN     G + +A R +   +   + P L 
Sbjct: 410 KVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLV 469

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
             NT++ G CR   ++   +    M    + PD I++  LI G   + ++  A L   +M
Sbjct: 470 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKM 529

Query: 515 LKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
            K GL PD+ITY+ +++G  + G+     L + K++E+ G+ PD + Y  L+N  + + N
Sbjct: 530 EKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEK-GINPDRSTYTALINGHVTQDN 588

Query: 574 LDAALKLFGQLTDRGLEPD 592
           L+ A +   ++  RG  PD
Sbjct: 589 LNEAFRFHDEMLQRGFAPD 607



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 246/496 (49%), Gaps = 44/496 (8%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVY----EFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+   V +  + +  +  R +R KG+ V       L+ GL++   +E A+ +HR+V++ G
Sbjct: 54  LIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSG 113

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
              N+ T N ++  LC +G+  +  S    +   G   ++VT++TLI A+C+E  LE+AF
Sbjct: 114 IELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAF 173

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           ++ N M +  L P L  Y+ +I+GL K GR      +L+  L+ GL  D   +++++   
Sbjct: 174 EIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVES 233

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVIS--------------------------------- 355
               +   A + +  ML  G +P+++S                                 
Sbjct: 234 CRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDN 293

Query: 356 --YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
             Y++L+ G C+ G ++EA  +  ++L +     ++ Y+++++G CK   L D   L+D 
Sbjct: 294 VIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDE 353

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M++RG  PD    + LI+G      M  AL  F    +  + P++  +NTL+DG C++  
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                +L+  M    I P+ IT+ +LI    S G +S A  L+  M+++G+ P ++T + 
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 473

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I G  +  + S        M   GVAPD   YN L+N  ++E N+D A     ++   G
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533

Query: 589 LEPDIITYNTIICGYC 604
           L PDIITYN ++ G+C
Sbjct: 534 LLPDIITYNVVMNGFC 549



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 207/437 (47%), Gaps = 40/437 (9%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G    V++ L+   ++   +       R +  +G++ +I  CN +L  L     +  A  
Sbjct: 45  GTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWE 104

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   ++  G + NV T + ++NA CK+ K +    + + + EM                 
Sbjct: 105 VHREVVRSGIELNVYTLNIMVNALCKDGKFD---DVKSFLSEM----------------- 144

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
                 EGN         G+  D+V +++++ AY   G +  A +  + M + G  P++ 
Sbjct: 145 ------EGN---------GIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLF 189

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ +I GLC++GR   A G+  ++L   L P   TY++L+   C+     +   ++  M
Sbjct: 190 TYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM 249

Query: 415 IKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           +++G+ PD V  S LI     N  +  AL +F    +  L+P+  I+  LM G CR    
Sbjct: 250 LRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNM 309

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            + +K+   M       DVI +  ++ G+  +  L+ A  LF +M++RG  PD  T++ +
Sbjct: 310 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 369

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           IHG  +  N++  L +F  M +  + PDI  YN L++   K   ++ A +L+  +  R +
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429

Query: 590 EPDIITYNTIICGYCSL 606
            P+ ITY  +I  YCS+
Sbjct: 430 FPNHITYGILINAYCSV 446



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 188/383 (49%), Gaps = 10/383 (2%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           N + F  LI  + +  KL +  + + ++     +  +   + L+ GL K   ++   E+ 
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              +  G++L+V   + +++A    G           M   G   ++++Y+ LI   C++
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G L EA  +   +  + L+PSL TY+++I+G CK G+      +   M+  GL PD    
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 427 -SLLINGLMGD----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
            +LL+     D    A   F + +R  ++P+L  F++L+    R +     +  F  M  
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
           + + PD + +TVL+ G    G++  A+ +  +ML++G   DVI Y+ I++GL K K ++ 
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTD 346

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
              +F  M   G  PD   +  L++   ++ N+  AL LFG +T R ++PDI+ YNT+I 
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406

Query: 602 GYCSLN-----SCLIDGYFKSQI 619
           G+C +      S L DG    +I
Sbjct: 407 GFCKVGEMEKASELWDGMISRKI 429



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 167/314 (53%), Gaps = 4/314 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+  Y R G + E+++I   M + G  L       +++ L     +    KL   M 
Sbjct: 296 YTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMV 355

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G    F  +  L++G  + G +  A  +   + QR   P+IV  N ++   C  G++ 
Sbjct: 356 ERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEME 415

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS L+D ++     PN +T+  LINA+C    + +AF+L+++M+E  + P L+  + +I
Sbjct: 416 KASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 475

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  ++G   + +E L   + +G+  D + ++++++ +V   ++ +A    ++M   G L
Sbjct: 476 KGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLL 535

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++I+Y++++ G C+QGR+ EA  +  +++ + + P   TY++LI+G      L + F  
Sbjct: 536 PDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRF 595

Query: 411 YDNMIKRGLKPDAV 424
           +D M++RG  PD V
Sbjct: 596 HDEMLQRGFAPDDV 609


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 148/498 (29%), Positives = 252/498 (50%), Gaps = 11/498 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           +FL++   R      +  ++  M+ + +  S   +  L+ C  D+      + +   +  
Sbjct: 78  NFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLK 137

Query: 176 KGFCVYEFLMN----GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF V  F+MN    GL R G +  A  + R++ ++   P+IV+ N ++  LC   ++  
Sbjct: 138 RGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKE 197

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L   +   G  PN VT +TL++  CK+ ++++A +L   M +     D+++Y  LI 
Sbjct: 198 AVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLIS 257

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G    G L  G EL    L +G+  +VV +S ++     +G    A    + M   G  P
Sbjct: 258 GFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHP 317

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V++Y+ LI GLC+ GR   A  L   ++ +  EPS +TY+ L+ G CK G + D F + 
Sbjct: 318 DVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL 377

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ--SVRMTLIPNLFIFNTLMDGCC 464
             MI++G K D V  + L+ GL     + +AL+ F         L PN+F FN L+ G C
Sbjct: 378 RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLC 437

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  R T  VK+   M       +++T+ +L+ G    G +  A+ L+ Q+L  G  P+  
Sbjct: 438 KEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 497

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TYS +I G  K + +++   +F  M  +G+ P +  YN L+  L KE +L+ A  LF ++
Sbjct: 498 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 557

Query: 585 TDRGLEPDIITYNTIICG 602
            +   EPDII++NT+I G
Sbjct: 558 GNANCEPDIISFNTMIDG 575



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 250/501 (49%), Gaps = 11/501 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI    +  K+ E+V +   M   G + +      LM  L     + +  +L  AM+
Sbjct: 182 YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 241

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KGF     +Y  L++G    G ++    +  +++ +G   N+VT + ++  LC  GQ  
Sbjct: 242 KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWK 301

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+++ + +   G  P+VVT++ LI+  CK+ +   A  L NLM+E    P  + Y++L+
Sbjct: 302 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 361

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG-- 348
            GL K G + +  ++L   +++G K DVV ++++M      G V  A++ ++ M +    
Sbjct: 362 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 421

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV ++++LI GLC++GRL +A  +  +++ +    +L+TY+ L+ G  K+GK+++  
Sbjct: 422 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 481

Query: 409 SLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  ++  G  P++   S+LI+G     ++  A   F +     L P LF +NTLM   
Sbjct: 482 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 541

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+         LF  MG  N +PD+I+   +I G    G       L  +M++ GL PD 
Sbjct: 542 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDA 601

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +T+S +I+ L K   +       + M  +G  PD  +Y+ LL  L  + +    + L  Q
Sbjct: 602 LTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQ 661

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           +  +G   D    +TI+   C
Sbjct: 662 MAAKGTVLDRKIVSTILTCLC 682



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 247/503 (49%), Gaps = 15/503 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           + +++   R G + E++ +   M    +  SPD+V    L++ L  +  + +   L   M
Sbjct: 148 NIVLKGLCRNGGVFEAMGLIREMGRKSV--SPDIVSYNTLINGLCKAKKLKEAVGLLLEM 205

Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G          LM+GL + G ++ A  +   + ++GF  ++V    ++   C NG +
Sbjct: 206 EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 265

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
                LFD +L  G   NVVT+S L++  C+  + ++A  + N M E  + PD++ Y+ L
Sbjct: 266 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 325

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDGL K GR     +LL   +++G +   V ++ ++      G V  A +    M+  G 
Sbjct: 326 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 385

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR--LEPSLLTYSSLIDGFCKSGKLRDG 407
             +V++Y+ L+KGLC +G++ EA  LF  +      LEP++ T++ LI G CK G+L   
Sbjct: 386 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 445

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDG 462
             ++  M+K+G   + V  ++L+ G +      +A+  + Q + +  +PN F ++ L+DG
Sbjct: 446 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 505

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+++       LF  M  + + P +  +  L+  +  +GSL  A  LF +M      PD
Sbjct: 506 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 565

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           +I+++ +I G  K  +      +   M   G+ PD   ++ L+N L K   LD A     
Sbjct: 566 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE 625

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
           ++   G  PD + Y++++ G  S
Sbjct: 626 RMVASGFTPDALVYDSLLKGLSS 648



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 192/394 (48%), Gaps = 9/394 (2%)

Query: 220 LKRLC--INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           L+ LC   N Q   A SLF   L     P+  T + L++A  +      AF +Y  M  +
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           D++P     S LI+    A + + G  ++   L RG  ++V + + V+      G V  A
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +     M      P+++SY+ LI GLC+  +L EA GL  ++      P+ +T ++L+DG
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPN 452
            CK G++ +   L + M K+G   D V+   LI     NG +      F + +   +  N
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  ++ L+ G CRL +  +   +   M  + I PDV+T+T LI G+   G  + A+ L  
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            M+++G  P  +TY+ ++ GL K   +     + ++M   G   D+  YN L+  L  + 
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKG 403

Query: 573 NLDAALKLFGQLTDRG--LEPDIITYNTIICGYC 604
            +D ALKLF  + D    LEP++ T+N +I G C
Sbjct: 404 KVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLC 437



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 206/431 (47%), Gaps = 13/431 (3%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  +    +    +P+  TCN ++  L  +   G A S++  +  V   P+  + S LI
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
             F    K +  F +  L+++     ++ I +I++ GL + G + E   L+     + + 
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D+V ++++++       +  AV     M   G  PN ++ + L+ GLC+ GR+ EA  L
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
              +  +  +  ++ Y +LI GFC +G L  G  L+D M+ +G+  + V  S L++GL  
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
                +A           + P++  +  L+DG C+  RAT  + L  LM     +P  +T
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM- 549
           + VL+ G+  +G +  A  +   M+++G   DV+TY+ ++ GL     +   L +F  M 
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416

Query: 550 -ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
              N + P++  +N+L+  L KE  L  A+K+  ++  +G   +++TYN ++ G      
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG------ 470

Query: 609 CLIDGYFKSQI 619
           CL  G  K  +
Sbjct: 471 CLKAGKIKEAM 481



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 41/293 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++     GK+DE++++F  M D    L P++     L+  L     + +  K+ R 
Sbjct: 392 YNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRK 451

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT------------- 215
           M  KG C     Y  L+ G L+ G I+ A  + +QV+  GFVPN  T             
Sbjct: 452 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 511

Query: 216 --------C--------------NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
                   C              N ++  LC  G +  A SLF  +     +P++++F+T
Sbjct: 512 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 571

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +I+   K    +   +L   M+EM L PD + +S LI+ L K G L E    L   +  G
Sbjct: 572 MIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 631

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              D +V+ S++      GD    +    +M   G + +    S ++  LC  
Sbjct: 632 FTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 684


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 163/639 (25%), Positives = 291/639 (45%), Gaps = 75/639 (11%)

Query: 44  KTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLL----QSDMRDVASHVFDKMVIQFGKTYN 99
           +  +P   + FF W+ + +  P       +L      S++  +A+ V  +M+     + +
Sbjct: 80  QVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSS 139

Query: 100 FFR----LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS 155
                   FR+  G     +  LI++Y R+G +DE+  +F    +  I +S      L S
Sbjct: 140 ILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRS 199

Query: 156 CLVDSNSVGQYYK-------LCRAMR----------------GKGFCVYEFLMNGLLRKG 192
            + +   V   Y        LCRA R                   +     L++G +R+G
Sbjct: 200 -MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 258

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            I+    +   ++  G   N++T N ++  LC  G++  A+ +   ++ +G KPN  TF 
Sbjct: 259 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 318

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
            LI  +C+E  + +A +L + M + +LVP  + Y  +I+GL     L   N+LL      
Sbjct: 319 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 378

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           GLK +VVV+S+++  Y   G +  A +  D M   G  P++  Y+ +I  L + G++ EA
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK------------ 420
                ++  R L+P  +T+ + I G+ K+GK+ +    +D M+  GL             
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498

Query: 421 -----------------------PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPN 452
                                  PD   CS  I+GL+      +AL+ F +     L+P+
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +F +++L+ G C+        +L   M +  I P++  +  L+ G+   G +  A  LF 
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            M ++GL PD +TYS +I G  K +N++    +F  M   GV P   +YN L++   KE 
Sbjct: 619 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 678

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLI 611
           +++ A+ LF ++  +G     +++NT+I GYC   SC I
Sbjct: 679 DMEKAMNLFREMLQKGF-ATTLSFNTLIDGYC--KSCKI 714



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 256/538 (47%), Gaps = 51/538 (9%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM-- 173
           S LI+ ++R G IDE + I   M   GI ++      L+  L     + +  ++ + M  
Sbjct: 248 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT 307

Query: 174 -----RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
                  + FC+   L+ G  R+  +  A  +  ++ +R  VP+ V+   ++  LC    
Sbjct: 308 LGCKPNSRTFCL---LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 364

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A+ L + +   G KPNVV +STLI  +  E ++E+A +L + M    + PD+  Y+ 
Sbjct: 365 LSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 424

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I  L KAG+++E +  LL    RGLK D V F + +  Y   G +  A + +D ML+ G
Sbjct: 425 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484

Query: 349 FLPNVISYSILIKG-----------------------------------LCQQGRLVEAC 373
            +PN   Y++LI G                                   L + GR+ EA 
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 544

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +F ++  + L P + TYSSLI GFCK G++   F L+D M  +G+ P+  + + L++GL
Sbjct: 545 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 604

Query: 434 --MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
              GD   A + F       L P+   ++T++DG C+ +   +   LF  M    ++P  
Sbjct: 605 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 664

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
             +  L+ G   +G +  A+ LF +ML++G     ++++ +I G  K   I     +F+ 
Sbjct: 665 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQE 723

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           M    + PD   Y  +++   K   ++ A  LF ++ +R L  D +TY +++ GY  L
Sbjct: 724 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL 781



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 242/495 (48%), Gaps = 37/495 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  Y   G+I+E+  +   MS  G+  +PD+                         
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGV--APDI------------------------- 419

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
              FC Y  +++ L + G +E A     ++  RG  P+ VT    +      G++  A+ 
Sbjct: 420 ---FC-YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 475

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            FD +L  G  PN   ++ LIN   K   L +A  ++  +  + ++PD+   S  I GL 
Sbjct: 476 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLL 535

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K GR++E  ++     ++GL  DV  +SS++  +   G+V +A + +D M   G  PN+ 
Sbjct: 536 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 595

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ L+ GLC+ G +  A  LF  +  + LEP  +TYS++IDG+CKS  + + FSL+  M
Sbjct: 596 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 655

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
             +G++P + V + L++G      M  A+  F + ++      L  FNTL+DG C+  + 
Sbjct: 656 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKI 714

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  +LF  M    I PD +T+T +I      G +  A LLF +M +R L  D +TY+++
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 774

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           ++G  K    S    +F+ M   GV PD   Y +++    KE NL  A KL  ++  +G+
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834

Query: 590 EPDIITYNTIICGYC 604
                 ++ +I   C
Sbjct: 835 LTKGTIHDLLITALC 849



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 214/427 (50%), Gaps = 10/427 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + + G + E++ IF ++  +G+          +  L+ +  V +  K+   ++
Sbjct: 492 YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 551

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++G  ++G +E AF +H ++  +G  PNI   N ++  LC +G I 
Sbjct: 552 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 611

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LFD +   G +P+ VT+ST+I+ +CK   + +AF L++ M    + P   +Y+ L+
Sbjct: 612 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 671

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K G +++   L    L +G     + F++++D Y     +  A Q +  M+    +
Sbjct: 672 HGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 730

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y+ +I   C+ G++ EA  LF ++  R L    +TY+SL+ G+ K G+  + F+L
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++ M+ +G+KPD V   L+I        + +A +   + V   ++    I + L+   C+
Sbjct: 791 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 850

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            +  T+  KL   MG   +KP +   + L+R     G +  A  +F  +   GL PD  T
Sbjct: 851 REDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 910

Query: 526 YSAIIHG 532
              +++G
Sbjct: 911 LIDLVNG 917



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 200/431 (46%), Gaps = 26/431 (6%)

Query: 44  KTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNF 100
           K  N   A+  F+  H     P++   +  IH LL++     A  VF ++  + G   + 
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK-EKGLVPDV 559

Query: 101 FRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           F             YS LI  + + G+++++ E+   M   GI  +  +   L+  L  S
Sbjct: 560 FT------------YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 607

Query: 161 NSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
             + +  KL   M  KG       Y  +++G  +   +  AF +  ++  +G  P+    
Sbjct: 608 GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 667

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++   C  G +  A +LF  +L  G     ++F+TLI+ +CK  K+++A QL+  M+ 
Sbjct: 668 NALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIA 726

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             ++PD + Y+ +ID   KAG+++E N L     +R L +D V ++S+M  Y  +G    
Sbjct: 727 KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSE 786

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
               +++M+  G  P+ ++Y ++I   C++  LVEA  L  +V+ + +      +  LI 
Sbjct: 787 VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLIT 846

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIP 451
             CK   L +   L D M + GLKP    CS L+      G M +A R F     + L+P
Sbjct: 847 ALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP 906

Query: 452 NLFIFNTLMDG 462
           +      L++G
Sbjct: 907 DTTTLIDLVNG 917



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 170/331 (51%), Gaps = 13/331 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLC 170
           Y+ L++   + G I  + ++F  M + G  L PD V    S ++D    S +V + + L 
Sbjct: 597 YNALVDGLCKSGDIQRARKLFDGMPEKG--LEPDSVT--YSTMIDGYCKSENVAEAFSLF 652

Query: 171 RAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M  KG   + F+ N L+    ++G +E A ++ R+++Q+GF   + + N ++   C +
Sbjct: 653 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKS 711

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            +I  AS LF  ++     P+ VT++T+I+  CK  K+E+A  L+  M E +L+ D + Y
Sbjct: 712 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 771

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + L+ G  K G+  E   L    + +G+K D V +  V+ A+    ++  A +  D ++ 
Sbjct: 772 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 831

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G L     + +LI  LC++  L EA  L  ++    L+PSL   S+L+  F ++GK+ +
Sbjct: 832 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDE 891

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
              +++ +   GL PD      L+NG + D 
Sbjct: 892 ATRVFEGVKSLGLVPDTTTLIDLVNGNLNDT 922


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 261/541 (48%), Gaps = 47/541 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +IE   ++G IDE+VE+   M + G+  +      + + L  +  + +       M+
Sbjct: 266 YSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQ 325

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G    +     L++G +R+G I+    +   ++  G   N++T N ++  LC  G++ 
Sbjct: 326 KTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKME 385

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ +   ++ +G KPN  TF  LI  +C+E  + +A +L + M + +LVP  + Y  +I
Sbjct: 386 KAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMI 445

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL     L   N+LL      GLK +VVV+S ++ AY   G +  A +  D M   G  
Sbjct: 446 NGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVA 505

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++  Y+ +I  L + G++ EA     ++  R L+P  +T+ + I G+ K+GK+ +    
Sbjct: 506 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 565

Query: 411 YDNMIKRGLK-----------------------------------PDAVVCSLLINGLMG 435
           +D M+  GL                                    PD   CS  I+GL+ 
Sbjct: 566 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLK 625

Query: 436 -----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
                +AL+ F +     L+P++F +++L+ G C+        +L   M +  I P++  
Sbjct: 626 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 685

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  L+ G+   G +  A  LF  M ++GL PD +TYS +I G  K +N++    +F  M 
Sbjct: 686 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
             GV P   +YN L++   KE +++ A+ LF ++  +G     +++NT+I GYC   SC 
Sbjct: 746 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYC--KSCK 802

Query: 611 I 611
           I
Sbjct: 803 I 803



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 163/648 (25%), Positives = 297/648 (45%), Gaps = 87/648 (13%)

Query: 44  KTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLL----QSDMRDVASHVFDKMVIQFGKTYN 99
           +  +P   + FF W+ + +  P       +L      S++  +A+ V  +M+     + +
Sbjct: 82  QVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSS 141

Query: 100 FFR----LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLS----PDLVQ 151
                   FR+  G     +  LI++Y R+G +DE+  +F    +  I +S      L++
Sbjct: 142 ILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLK 201

Query: 152 RLMSC------------LVDSNSVGQYY-------KLCRA--MRG----------KGFC- 179
            L+ C            ++D+      Y        LC+   +RG          KG   
Sbjct: 202 DLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNP 261

Query: 180 ---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
              +Y  ++ G+ + G I+ A  + R + ++G VPN  T   I   LC   ++  A   F
Sbjct: 262 NEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTF 321

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + +   G KP+    S LI+ F +E  +++  ++ ++M+   +  +LI Y++LI GL K 
Sbjct: 322 EEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKF 381

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G++++  E+L   +  G K +   F  +++ Y    ++GRA++  D M     +P+ +SY
Sbjct: 382 GKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSY 441

Query: 357 SILIKGLCQ-----------------------------------QGRLVEACGLFGQVLI 381
             +I GLC                                    +GR+ EA  L   +  
Sbjct: 442 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSC 501

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGD 436
             + P +  Y+++I    K+GK+ +  +    +  RGLKPDAV     I      G M +
Sbjct: 502 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 561

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A ++F + +   L+PN  ++  L++G  +     + + +F  +    + PDV T +  I 
Sbjct: 562 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIH 621

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+   G +  A+ +F ++ ++GL PDV TYS++I G  K   +     +   M   G+AP
Sbjct: 622 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 681

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +I IYN L++ L K  ++  A KLF  + ++GLEPD +TY+T+I GYC
Sbjct: 682 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 729



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 256/538 (47%), Gaps = 51/538 (9%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM-- 173
           S LI+ ++R G IDE + I   M   GI ++      L+  L     + +  ++ + M  
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396

Query: 174 -----RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
                  + FC+   L+ G  R+  +  A  +  ++ +R  VP+ V+   ++  LC    
Sbjct: 397 LGCKPNSRTFCL---LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 453

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A+ L + +   G KPNVV +S LI A+  E ++E+A +L + M    + PD+  Y+ 
Sbjct: 454 LSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 513

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I  L KAG+++E +  LL    RGLK D V F + +  Y   G +  A + +D ML+ G
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 573

Query: 349 FLPNVISYSILIKG-----------------------------------LCQQGRLVEAC 373
            +PN   Y++LI G                                   L + GR+ EA 
Sbjct: 574 LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 633

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +F ++  + L P + TYSSLI GFCK G++   F L+D M  +G+ P+  + + L++GL
Sbjct: 634 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 693

Query: 434 --MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
              GD   A + F       L P+   ++T++DG C+ +   +   LF  M    ++P  
Sbjct: 694 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 753

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
             +  L+ G   +G +  A+ LF +ML++G     ++++ +I G  K   I     +F+ 
Sbjct: 754 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQE 812

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           M    + PD   Y  +++   K   ++ A  LF ++ +R L  D +TY +++ GY  L
Sbjct: 813 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL 870



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 242/495 (48%), Gaps = 37/495 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  Y   G+I+E+  +   MS  G+  +PD+                         
Sbjct: 476 YSILIMAYASEGRIEEARRLLDGMSCSGV--APDI------------------------- 508

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
              FC Y  +++ L + G +E A     ++  RG  P+ VT    +      G++  A+ 
Sbjct: 509 ---FC-YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 564

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            FD +L  G  PN   ++ LIN   K   L +A  ++  +  + ++PD+   S  I GL 
Sbjct: 565 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLL 624

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K GR++E  ++     ++GL  DV  +SS++  +   G+V +A + +D M   G  PN+ 
Sbjct: 625 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 684

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ L+ GLC+ G +  A  LF  +  + LEP  +TYS++IDG+CKS  + + FSL+  M
Sbjct: 685 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
             +G++P + V + L++G      M  A+  F + ++      L  FNTL+DG C+  + 
Sbjct: 745 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKI 803

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  +LF  M    I PD +T+T +I      G +  A LLF +M +R L  D +TY+++
Sbjct: 804 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 863

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           ++G  K    S    +F+ M   GV PD   Y +++    KE NL  A KL  ++  +G+
Sbjct: 864 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 923

Query: 590 EPDIITYNTIICGYC 604
                 ++ +I   C
Sbjct: 924 LTKGTIHDLLITALC 938



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 212/427 (49%), Gaps = 10/427 (2%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ LI  + + G + E++ IF  +  +G+          +  L+ +  V +  K+   ++
Sbjct: 581  YTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 640

Query: 175  GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             KG       Y  L++G  ++G +E AF +H ++  +G  PNI   N ++  LC +G I 
Sbjct: 641  EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 700

Query: 231  NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
             A  LFD +   G +P+ VT+ST+I+ +CK   + +AF L++ M    + P   +Y+ L+
Sbjct: 701  RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 760

Query: 291  DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             G  K G +++   L    L +G     + F++++D Y     +  A Q +  M+    +
Sbjct: 761  HGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 819

Query: 351  PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            P+ ++Y+ +I   C+ G++ EA  LF ++  R L    +TY+SL+ G+ K G+  + F+L
Sbjct: 820  PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879

Query: 411  YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            ++ M+ +G+KPD V   L+I        + +A +   + V   ++    I + L+   C+
Sbjct: 880  FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 939

Query: 466  LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +  T+  KL   MG   +KP +     L+R     G +  A  +F  +   GL PD  T
Sbjct: 940  REDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 999

Query: 526  YSAIIHG 532
               +++G
Sbjct: 1000 LIDLVNG 1006



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 200/431 (46%), Gaps = 26/431 (6%)

Query: 44   KTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNF 100
            K  N   A+  F+  H     P++   +  IH LL++     A  VF ++  + G   + 
Sbjct: 590  KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK-EKGLVPDV 648

Query: 101  FRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
            F             YS LI  + + G+++++ E+   M   GI  +  +   L+  L  S
Sbjct: 649  FT------------YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 696

Query: 161  NSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
              + +  KL   M  KG       Y  +++G  +   +  AF +  ++  +G  P+    
Sbjct: 697  GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 756

Query: 217  NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
            N ++   C  G +  A +LF  +L  G     ++F+TLI+ +CK  K+++A QL+  M+ 
Sbjct: 757  NALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIA 815

Query: 277  MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
              ++PD + Y+ +ID   KAG+++E N L     +R L +D V ++S+M  Y  +G    
Sbjct: 816  KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSE 875

Query: 337  AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
                +++M+  G  P+ ++Y ++I   C++  LVEA  L  +V+ + +      +  LI 
Sbjct: 876  VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLIT 935

Query: 397  GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIP 451
              CK   L +   L D M + GLKP    C+ L+      G M +A R F     + L+P
Sbjct: 936  ALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVP 995

Query: 452  NLFIFNTLMDG 462
            +      L++G
Sbjct: 996  DTTTLIDLVNG 1006



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 170/331 (51%), Gaps = 13/331 (3%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLC 170
            Y+ L++   + G I  + ++F  M + G  L PD V    S ++D    S +V + + L 
Sbjct: 686  YNALVDGLCKSGDIQRARKLFDGMPEKG--LEPDSVT--YSTMIDGYCKSENVAEAFSLF 741

Query: 171  RAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
              M  KG   + F+ N L+    ++G +E A ++ R+++Q+GF   + + N ++   C +
Sbjct: 742  HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKS 800

Query: 227  GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
             +I  AS LF  ++     P+ VT++T+I+  CK  K+E+A  L+  M E +L+ D + Y
Sbjct: 801  CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 860

Query: 287  SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            + L+ G  K G+  E   L    + +G+K D V +  V+ A+    ++  A +  D ++ 
Sbjct: 861  TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 920

Query: 347  GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
             G L     + +LI  LC++  L EA  L  ++    L+PSL   ++L+  F ++GK+ +
Sbjct: 921  KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDE 980

Query: 407  GFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
               +++ +   GL PD      L+NG + D 
Sbjct: 981  ATRVFEGVKSLGLVPDTTTLIDLVNGNLNDT 1011



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 174/380 (45%), Gaps = 37/380 (9%)

Query: 231 NASSLFDVLLLV-----GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           ++SS+ D +L       G  P  V F  LI+++ +   L++A  ++ +     ++  LI 
Sbjct: 138 SSSSILDSVLFWFRNYGGSSP--VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIR 195

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
            + L+  L K G ++   ++    LD  +  DV  ++ ++ A    GD+  A +    M 
Sbjct: 196 CNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMD 255

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  PN   YS++I+G+CQ G + EA  L   +  + L P+  TY+ +  G C++ ++ 
Sbjct: 256 EKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMN 315

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +    ++ M K GLKPD   CS LI+G                     F+    +D   R
Sbjct: 316 EAKLTFEEMQKTGLKPDYNACSALIDG---------------------FMREGDIDEVLR 354

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           +K          +M    I  ++IT+ VLI G+   G +  A  +   M+  G  P+  T
Sbjct: 355 IKD---------VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRT 405

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           +  +I G  +  N+   L +   ME+  + P    Y  ++N L    +L  A KL  ++T
Sbjct: 406 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 465

Query: 586 DRGLEPDIITYNTIICGYCS 605
             GL+P+++ Y+ +I  Y S
Sbjct: 466 FSGLKPNVVVYSILIMAYAS 485


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 252/504 (50%), Gaps = 38/504 (7%)

Query: 110 DFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           D+G D   +    +  V  G +DE+ ++F  M + G+ +S D     +S L +       
Sbjct: 177 DWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSED------ 230

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
                             ++G      I+ A  +  +  + G   N  + N I   LC  
Sbjct: 231 ------------------LDG------IKIALKVFVEFPEVGVCWNTASYNIITHSLCQL 266

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++  A  L   + L G  P+V+++ST+IN +C+  +L++  +L   M    L P+   Y
Sbjct: 267 GRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTY 326

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + +I  L K G++ E   +L   +  G+  D V++++++D +  +G+V  A + +D M  
Sbjct: 327 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 386

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               P+ I+Y+ +I GLCQ GR++EA  LF +++ +RLEP  +TY++LIDG+CK GK+++
Sbjct: 387 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 446

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            FSL++ M++ GL P+ V  + L +GL     +  A     +  R  L  N++ +N+L++
Sbjct: 447 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 506

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+       VKL   M +    PD +T+T L+        +  A  L  QML R L P
Sbjct: 507 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 566

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            V+T++ +++G      +  G  + K M   G+ P+   YN L+       N+ A  +++
Sbjct: 567 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 626

Query: 582 GQLTDRGLEPDIITYNTIICGYCS 605
             +  +G+ PD  TYN +I G+C 
Sbjct: 627 RGMCAKGVVPDGNTYNILIKGHCK 650



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 149/602 (24%), Positives = 280/602 (46%), Gaps = 99/602 (16%)

Query: 63  SSPNIAQLI-HVLLQSDMRDVASHVFDKMVIQFG-----KTYNFF--RLFRDSLG----- 109
           S P +  +   VL+++ M D A  +FDKM + +G      + N F   L  D  G     
Sbjct: 180 SDPRVFDIFFQVLVEAGMLDEARKLFDKM-LNYGLLISVDSCNLFISHLSEDLDGIKIAL 238

Query: 110 -------DFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV------- 150
                  + G       Y+ +  +  ++G++ E+ ++   M   G    PD++       
Sbjct: 239 KVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCI--PDVISYSTVIN 296

Query: 151 --------QRLMSCLVD----------------------SNSVGQYYKLCRAMRGKGFC- 179
                   QR++  + +                      +  V +  ++ R M  +G   
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAP 356

Query: 180 ---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
              +Y  L++G  + G + +A+ +  ++ +R   P+ +T   ++  LC  G++  A  LF
Sbjct: 357 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 416

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             ++    +P+ VT++ LI+ +CKE K+++AF L+N M++M L P+++ Y+ L DGL K 
Sbjct: 417 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 476

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G +   NELL     +GL+L++  ++S+++     G++ +AV+    M   GF P+ ++Y
Sbjct: 477 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 536

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + L+   C+   +V A  L  Q+L R L+P+++T++ L++GFC SG L DG  L   M++
Sbjct: 537 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 596

Query: 417 RGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           +G+ P+A                                +N+L+   C       T +++
Sbjct: 597 KGIMPNATT------------------------------YNSLIKQYCIRNNMRATTEIY 626

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    + PD  T+ +LI+G     ++  A  L   M+ +G    V +Y+A+I G +K 
Sbjct: 627 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 686

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
           K       +F+ M R G+  D  IYN+  ++   E  ++  L+L  +  ++ L  DI T 
Sbjct: 687 KKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTK 746

Query: 597 NT 598
           NT
Sbjct: 747 NT 748



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 221/439 (50%), Gaps = 14/439 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC--INGQIGNASSLFD 237
           V++     L+  G+++ A  +  +++  G + ++ +CN  +  L   ++G I  A  +F 
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDG-IKIALKVFV 242

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL---VPDLIIYSILIDGLF 294
               VG   N  +++ + ++ C+  ++ +A QL   +++M+L   +PD+I YS +I+G  
Sbjct: 243 EFPEVGVCWNTASYNIITHSLCQLGRVVEAHQL---LLQMELRGCIPDVISYSTVINGYC 299

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + G L+   +L+     +GLK +   ++ V+      G V  A +    M++ G  P+ +
Sbjct: 300 QVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV 359

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ LI G C+ G +  A  LF ++  R++ P  +TY+++I G C++G++ +   L+  M
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 419

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + + L+PD V  + LI+G      M +A     Q ++M L PN+  +  L DG C+    
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
               +L   M    ++ ++ T+  L+ G+   G++  A+ L   M   G  PD +TY+ +
Sbjct: 480 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           +    K + +     + + M    + P +  +NVL+N       L+   KL   + ++G+
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599

Query: 590 EPDIITYNTIICGYCSLNS 608
            P+  TYN++I  YC  N+
Sbjct: 600 MPNATTYNSLIKQYCIRNN 618


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 227/417 (54%), Gaps = 5/417 (1%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           I  AF + R+  + G   N V+ N IL  LC  G++  A SL   +   G  P+VV++S 
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +++ +C+  +L K  +L   +    L P+   Y+ +I  L K GR+ E  ++L    ++ 
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  D VV+++++  +   G+V    + +D M     +P+ ++Y+ +I GLCQ G++VEA 
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            LF ++L + L+P  +TY++LIDG+CK+G++++ FSL++ M+++GL P+ V  + L++GL
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                +  A     +     L PN+  +N L++G C++      VKL   M +    PD 
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           IT+T ++      G ++ A  L   ML +GL P ++T++ +++G      +  G  + K 
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW 592

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           M   G+ P+   +N L+       N+ A ++++  +  +G+ PD  TYN +I G+C 
Sbjct: 593 MLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCK 649



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 253/490 (51%), Gaps = 35/490 (7%)

Query: 104 FRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
           FR ++ D    YS +++ Y ++ ++ + +++   +   G+  +      ++S L  +  V
Sbjct: 280 FRGNVPDV-VSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRV 338

Query: 164 GQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            +  ++ R M+ +       VY  L++G  + G +   + +  ++ ++  VP+ VT   +
Sbjct: 339 VEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSM 398

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  LC  G++  A  LF  +L  G KP+ VT++ LI+ +CK  ++++AF L+N M+E  L
Sbjct: 399 IHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL 458

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            P+++ Y+ L+DGL K G +   NELL    ++GL+ +V  ++++++    +G++ +AV+
Sbjct: 459 TPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVK 518

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
             + M   GF P+ I+Y+ ++   C+ G + +A  L   +L + L+P+++T++ L++GFC
Sbjct: 519 LMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFC 578

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
            SG L DG  L   M+ +G+ P+A                                FN+L
Sbjct: 579 MSGMLEDGERLIKWMLDKGIMPNATT------------------------------FNSL 608

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           M   C       T++++  M    + PD  T+ +LI+G     ++  A  L  +M+++G 
Sbjct: 609 MKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGF 668

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
           +    +Y+++I G +K K       +F+ M  +G   +  IY++ +++  +E N +  L+
Sbjct: 669 SLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLE 728

Query: 580 LFGQLTDRGL 589
           L  +  ++ L
Sbjct: 729 LCDEAIEKCL 738



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 228/482 (47%), Gaps = 9/482 (1%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEF 183
           I  +  +F   S++G+  +      ++  L     V + + L   M  +G       Y  
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++G  +   +     +  ++ ++G  PN  T N I+  LC  G++  A  +  V+    
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+ V ++TLI+ F K   +   ++L++ M    +VPD + Y+ +I GL +AG++ E  
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L    L +GLK D V +++++D Y   G++  A   +++M+  G  PNV++Y+ L+ GL
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+ G +  A  L  ++  + L+P++ TY++LI+G CK G +     L + M   G  PD 
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  + +++     G M  A       +   L P +  FN LM+G C      D  +L   
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW 592

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    I P+  T   L++    + ++ + I ++  M  +G+ PD  TY+ +I G  K +N
Sbjct: 593 MLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARN 652

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     + K M   G +   A YN L+    K    + A KLF ++   G   +   Y+ 
Sbjct: 653 MKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDI 712

Query: 599 II 600
            +
Sbjct: 713 FV 714



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 223/438 (50%), Gaps = 12/438 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN-GQIGNASSLFDV 238
           V++     L+  G++  A  +  +++  G + ++ +CN  L RL  +   I  A  +F  
Sbjct: 183 VFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFRE 242

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL---VPDLIIYSILIDGLFK 295
              VG   N V+++ +++  C+  K+++A   ++L+++M+    VPD++ YS+++DG  +
Sbjct: 243 YSEVGVCWNTVSYNIILHLLCQLGKVKEA---HSLLIQMEFRGNVPDVVSYSVIVDGYCQ 299

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
             +L +  +L+     +GLK +   ++S++      G V  A Q    M N    P+ + 
Sbjct: 300 VEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV 359

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI G  + G +     LF ++  +++ P  +TY+S+I G C++GK+ +   L+  M+
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEML 419

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            +GLKPD V  + LI+G      M +A     Q V   L PN+  +  L+DG C+     
Sbjct: 420 SKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVD 479

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              +L   M    ++P+V T+  LI G+   G++  A+ L  +M   G  PD ITY+ I+
Sbjct: 480 IANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIM 539

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
               K   ++    + ++M   G+ P I  +NVL+N       L+   +L   + D+G+ 
Sbjct: 540 DAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIM 599

Query: 591 PDIITYNTIICGYCSLNS 608
           P+  T+N+++  YC  N+
Sbjct: 600 PNATTFNSLMKQYCIRNN 617



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 171/332 (51%), Gaps = 12/332 (3%)

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV----VVFSSVMDAYVGIGDVGRAVQ 339
           +++ +    L +AG L E  +L    L+ G+ + V    +  + + +++ GI    R  +
Sbjct: 182 LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR 241

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            Y  +   G   N +SY+I++  LCQ G++ EA  L  Q+  R   P +++YS ++DG+C
Sbjct: 242 EYSEV---GVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYC 298

Query: 400 KSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           +  +L     L + + ++GLKP+     +++  L   G + +A +         + P+  
Sbjct: 299 QVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV 358

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           ++ TL+ G  +    +   KLF  M    I PD +T+T +I G+   G +  A  LF +M
Sbjct: 359 VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM 418

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           L +GL PD +TY+A+I G  K   +     +   M   G+ P++  Y  L++ L K   +
Sbjct: 419 LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEV 478

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           D A +L  +++++GL+P++ TYN +I G C +
Sbjct: 479 DIANELLHEMSEKGLQPNVCTYNALINGLCKV 510



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 188/362 (51%), Gaps = 21/362 (5%)

Query: 86  VFDKMVIQFGKTYNF---FRLF-----RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAY 137
           V+  ++  FGK+ N    ++LF     +  + DF   Y+ +I    + GK+ E+ ++F+ 
Sbjct: 359 VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDF-VTYTSMIHGLCQAGKVVEARKLFSE 417

Query: 138 MSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLCRAMRGKGFC----VYEFLMNGLL 189
           M   G  L PD V    + L+D    +  + + + L   M  KG       Y  L++GL 
Sbjct: 418 MLSKG--LKPDEVT--YTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLC 473

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           + G ++ A  +  ++ ++G  PN+ T N ++  LC  G I  A  L + + L G  P+ +
Sbjct: 474 KCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTI 533

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           T++T+++A+CK  ++ KA +L  +M++  L P ++ +++L++G   +G L++G  L+   
Sbjct: 534 TYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWM 593

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           LD+G+  +   F+S+M  Y    ++   ++ Y  M   G +P+  +Y+ILIKG C+   +
Sbjct: 594 LDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNM 653

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  L  +++ +    +  +Y+SLI GF K  K  +   L++ M   G   +  +  + 
Sbjct: 654 KEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIF 713

Query: 430 IN 431
           ++
Sbjct: 714 VD 715



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 42/227 (18%), Positives = 89/227 (39%), Gaps = 40/227 (17%)

Query: 93  QFGKTYNFFRLFRDS-LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           +  K +   R+  D  L      ++ L+  +   G +++   +  +M D GI  +     
Sbjct: 547 EMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFN 606

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            LM      N++    ++ + M  +G       Y  L+ G  +   ++ A+ +H++++++
Sbjct: 607 SLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEK 666

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           GF                        SL              ++++LI  F K  K E+A
Sbjct: 667 GF------------------------SL-----------TAASYNSLIKGFYKRKKFEEA 691

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
            +L+  M     + +  IY I +D  ++ G  +   EL   A+++ L
Sbjct: 692 RKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCL 738


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 245/484 (50%), Gaps = 10/484 (2%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--VYEF-- 183
           +D+++  F  M  M    S     RL++ +  +      + L   M   G    VY    
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N       +  AF +  ++++ G  P+  T   +++ LC+ G+IG+A  LFD ++  G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNVVT+ TLIN  CK      A +L   M + +  PD+++Y+ +ID L K  ++ E  
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L    + +G+  D+  ++S++ +   + +        ++M+N   +P+V+ +S ++  L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G++ EA  +   ++IR +EP+++TY++L+DG C   ++ +   ++D M+  G  P+ 
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  + LING      M  A   F +  +  LIPN   +NTLM   C + R  D + LF  
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHE 408

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M  +   PD+ T+ +L+  +  +  L  A+ L   +    + PD+  Y+ +I G+ +   
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F  +   G+ P++  Y +++N L +   LD A KLF ++   G  PD  TYNT
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528

Query: 599 IICG 602
           I  G
Sbjct: 529 ITQG 532



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 210/447 (46%), Gaps = 48/447 (10%)

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
            HMH         P+ V  N++L  +    Q     SL + +   G  P+V T + LIN+
Sbjct: 61  LHMHPP-------PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINS 113

Query: 258 FCK-----------------------------------EAKLEKAFQLYNLMMEMDLVPD 282
           FC                                    E K+  A  L++ M+     P+
Sbjct: 114 FCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPN 173

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           ++ Y  LI+GL K G       LL +      + DVVV++S++D+      V  A   + 
Sbjct: 174 VVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFS 233

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           +M+  G  P++ +Y+ LI  LC          L  Q++  ++ P ++ +S+++D  CK G
Sbjct: 234 KMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEG 293

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
           K+ +   + D MI RG++P+ V  + L++G      M +A++ F   V     PN+  +N
Sbjct: 294 KITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYN 353

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           TL++G C+++R      LF  M    + P+ +T+  L+      G L  AI LF +M+  
Sbjct: 354 TLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAH 412

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G  PD+ TY  ++  L K  ++   + + K +E + + PDI IY ++++ + +   L+AA
Sbjct: 413 GQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAA 472

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
             +F  L+ +GL P++ TY  +I G C
Sbjct: 473 RDIFSNLSSKGLRPNVRTYTIMINGLC 499



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 239/502 (47%), Gaps = 52/502 (10%)

Query: 87  FDKMVIQFGKTYNFFRLFR-----DSLGDFGCDYSF--LIENYVRIGKIDESVEIFAYMS 139
           F++++    KT  +  +F      DS G     Y+   LI ++  + ++  +  + A + 
Sbjct: 72  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKIL 131

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIE 195
            +G          L+  L     +G    L   M G+GF      Y  L+NGL + G   
Sbjct: 132 KLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 191

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  + R + Q    P++V    I+  LC + Q+  A +LF  ++  G  P++ T+++LI
Sbjct: 192 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 251

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           ++ C   + +    L N M+   ++PD++I+S ++D L K G++ E ++++   + RG++
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 311

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            +VV ++++MD +    ++  AV+ +D M++ G+ PNVISY+ LI G C+  R+ +A  L
Sbjct: 312 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 371

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F ++  + L P+ +TY++L+   C  G+L+D  +L+  M+  G  PD     +L++ L  
Sbjct: 372 FEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 430

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              + +A+          + P++ I+  ++DG CR         +F  +    ++P+V T
Sbjct: 431 KSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRT 490

Query: 491 HTVLIRGIASQGSLSSAILLFFQM-----------------------------------L 515
           +T++I G+  +G L  A  LF +M                                   L
Sbjct: 491 YTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 550

Query: 516 KRGLTPDVITYSAIIHGLFKGK 537
            RG + DV T + ++  L   K
Sbjct: 551 ARGFSADVSTTTLLVEMLCDDK 572



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 137/270 (50%), Gaps = 5/270 (1%)

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           ++M + G  P+V + +ILI   C   RL  A  +  ++L    +P   T+++LI G C  
Sbjct: 93  NQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVE 152

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           GK+ D   L+D MI  G +P+ V    LINGL        A+R      +    P++ ++
Sbjct: 153 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 212

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            +++D  C+ ++ T+   LF  M    I PD+ T+T LI  + +         L  QM+ 
Sbjct: 213 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMIN 272

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
             + PDV+ +S ++  L K   I+    +  +M   GV P++  YN L++    +  +D 
Sbjct: 273 SKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDE 332

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           A+K+F  +   G  P++I+YNT+I GYC +
Sbjct: 333 AVKVFDTMVHNGYAPNVISYNTLINGYCKI 362



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 187/430 (43%), Gaps = 69/430 (16%)

Query: 83  ASHVFDKMV------------------IQFGKTYNFFRLFRDSLGDFGCD-----YSFLI 119
           A H+FDKM+                   + G T    RL R S+    C      Y+ +I
Sbjct: 158 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLR-SMEQGNCQPDVVVYTSII 216

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG 177
           ++  +  ++ E+  +F+ M   GI  SPD+     L+  L +         L   M    
Sbjct: 217 DSLCKDRQVTEAFNLFSKMVGQGI--SPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                 ++  +++ L ++G I  A  +   +I RG  PN+VT N ++   C+  ++  A 
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP------------ 281
            +FD ++  G  PNV++++TLIN +CK  +++KA  L+  M + +L+P            
Sbjct: 335 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC 394

Query: 282 ----------------------DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
                                 DL  Y IL+D L K   L E   LL T     +  D+ 
Sbjct: 395 HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 454

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           +++ V+D     G++  A   +  + + G  PNV +Y+I+I GLC++G L EA  LF ++
Sbjct: 455 IYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 514

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR 439
                 P   TY+++  G  ++ +      L   M+ RG   D    +LL+  L  D L 
Sbjct: 515 DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLD 574

Query: 440 FFFQSVRMTL 449
              QSV+  L
Sbjct: 575 ---QSVKQIL 581



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%)

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D +  F  M   +  P  +    L+  IA      +   L  QM   G+ PDV T + +I
Sbjct: 52  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 111

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +       +     +   + + G  PD A +  L+  L  E  +  AL LF ++   G +
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 171

Query: 591 PDIITYNTIICGYCSL 606
           P+++TY T+I G C +
Sbjct: 172 PNVVTYGTLINGLCKV 187


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 249/503 (49%), Gaps = 11/503 (2%)

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK----G 177
           Y R GKI E+V+ F  M       S      +M+ LV+     Q +K+   M+ K     
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y   +    R G    A  + R +   G   N V    ++      G    A  LFD
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L     P+V TF+ L++A CK+  + ++ +L++ +++  + P+L  ++I I GL K G
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 344

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            L     LL      GL+ DVV +++V+        V  A +   +M+NGGF PN  +Y+
Sbjct: 345 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYN 404

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I G C++G +V+A  +    + +  +P   TY SL++GFC+ G      +++ + + +
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464

Query: 418 GLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           GL+P  +V + LI GL        AL+   +       P+++ +N +++G C++   +D 
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             L          PD+ T+  L+ G   Q  L SAI L  +M  +G+TPDVITY+ +++G
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K       + +FK M   G AP+I  YN ++  L     ++ A+ L G++  +GL PD
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644

Query: 593 IITYNTIICGYCSLNSCLIDGYF 615
           ++++ T+I G+C +    +DG +
Sbjct: 645 VVSFGTLITGFCKVGD--LDGAY 665



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 271/553 (49%), Gaps = 48/553 (8%)

Query: 69  QLIHVLLQSDMRDVASHVFD-----KMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFL 118
           Q   V ++   + V S V+      K   + G+ Y   RL R+ +   GC      Y  +
Sbjct: 208 QAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRN-MPVLGCFSNAVAYCTV 266

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
           +  +   G  D + E+F  M  +   L PD+                             
Sbjct: 267 VTGFYEFGDNDRARELFDEM--LECCLCPDVT---------------------------- 296

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
             +  L++ L +KG +  +  +  +V++RG  PN+ T N  ++ LC  G +  A  L   
Sbjct: 297 -TFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGC 355

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G +P+VVT++T+I   C+++++ +A +  + M+     P+   Y+ +IDG  K G 
Sbjct: 356 VSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGM 415

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + + N +L  A+ +G K D   + S+++ +   GD  +A+  +   L  G  P++I Y+ 
Sbjct: 416 VVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNT 475

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LIKGLCQQG ++ A  L  ++  +  +P + TY+ +I+G CK G L D   L  + I +G
Sbjct: 476 LIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKG 535

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             PD    + L++G      +  A+    +     + P++  +NTL++G C+  ++ + +
Sbjct: 536 CIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVM 595

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           ++F  M      P++IT+  +I  + +   ++ A+ L  +M  +GLTPDV+++  +I G 
Sbjct: 596 EIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGF 655

Query: 534 FKGKNISVGLHMFKLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
            K  ++     +F+ ME+   V+   A YN++++   ++ N+  AL+LF ++   G +PD
Sbjct: 656 CKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPD 715

Query: 593 IITYNTIICGYCS 605
             TY  +I G+C 
Sbjct: 716 NYTYRVLIDGFCK 728



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 253/559 (45%), Gaps = 57/559 (10%)

Query: 51  AIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDS 107
           A + F     C   P++    +L+H L +      +  +FDK V++ G   N F      
Sbjct: 279 ARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDK-VLKRGVCPNLFT----- 332

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQ 165
                  ++  I+   + G +D +V +   +S  G  L PD+V    ++  L   + V +
Sbjct: 333 -------FNIFIQGLCKEGSLDRAVRLLGCVSREG--LRPDVVTYNTVICGLCRKSRVVE 383

Query: 166 YYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
             +    M   GF      Y  +++G  +KG++ +A  + +  + +GF P+  T   ++ 
Sbjct: 384 AEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVN 443

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
             C +G    A ++F   L  G +P+++ ++TLI   C++  +  A QL N M E    P
Sbjct: 444 GFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKP 503

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+  Y+++I+GL K G L + N L+  A+ +G   D+  +++++D Y     +  A++  
Sbjct: 504 DIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELV 563

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           +RM + G  P+VI+Y+ L+ GLC+  +  E   +F  +  +   P+++TY+++I+  C S
Sbjct: 564 NRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNS 623

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            K+ +   L   M  +GL PD V                               F TL+ 
Sbjct: 624 KKVNEAVDLLGEMKSKGLTPDVVS------------------------------FGTLIT 653

Query: 462 GCCRLKRATDTVKLFMLM-GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           G C++        LF  M   Y++     T+ ++I   + Q ++  A+ LF +M K G  
Sbjct: 654 GFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCD 713

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD  TY  +I G  K  N++ G          G  P +  +  +LN L  E  +  A+ +
Sbjct: 714 PDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGI 773

Query: 581 FGQLTDRGLEPDIITYNTI 599
              +  + + PD  T NTI
Sbjct: 774 IHLMVQKDIVPD--TVNTI 790


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 267/535 (49%), Gaps = 46/535 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM- 173
           Y  LI+ Y R+ K+D++V +   M ++G+ ++  +   L++    +  V +  +L   M 
Sbjct: 327 YGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMV 386

Query: 174 ----RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
                 + +  Y  LM+G  R+G++  A  ++ ++++ G   N+VT N +LK LC  G  
Sbjct: 387 DWDLEPESYS-YSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAF 445

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A  ++ ++L  G  P+ V++ TL++   K  +  +A  L+N ++          ++ +
Sbjct: 446 EDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTM 505

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I+G  K  ++ E  E      + G + D V + +++D Y  +G+V  A +  ++M     
Sbjct: 506 INGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAI 565

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           LP++  Y+ LI GL +  +  E   L  ++ ++ L P+++TY +LI G+C  G+L   F+
Sbjct: 566 LPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFT 625

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLM--------------------------------GDA 437
            Y +MI++G  P+ ++CS +++ L                                  D 
Sbjct: 626 AYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADD 685

Query: 438 LRFFFQSVRMTL--------IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
                Q +  TL        +PN  ++N  + G C+  +  D  K+F  + +    PD  
Sbjct: 686 GNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNF 745

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+  LI G ++ G+++ A  L  +MLKRGL P++ITY+A+I+GL K  N+     +F  +
Sbjct: 746 TYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL 805

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              G+AP++  YN+L++   K  N   AL L  ++   G+ P +ITY+ +I G+C
Sbjct: 806 HLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFC 860



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 212/409 (51%), Gaps = 18/409 (4%)

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           F P +   + ILK  C  G I NA  +FD +  +G  P++ + + L+++  ++ +   A 
Sbjct: 146 FSPTVF--DMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAI 203

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            +Y+ +  + +VPD+   SI+++   K G +    + +      G +L+VV ++S++D  
Sbjct: 204 LVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGC 263

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
           V IGD+ RA      M   G L N ++ ++LIKG C+Q +L EA     + ++R +E S 
Sbjct: 264 VSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEA-----EKVLREMERSE 318

Query: 389 ------LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
                   Y  LIDG+C+  K+ D   L D M+  GL+ +  +C+ LING      + +A
Sbjct: 319 GMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEA 378

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            R   + V   L P  + ++TLMDG CR    T  + ++  M    I+ +V+TH  L++G
Sbjct: 379 ERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKG 438

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G+   A+ ++  MLKRG+TPD ++Y  ++  LFK       L ++  +   G    
Sbjct: 439 LCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRS 498

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              +N ++N   K   +  A + F ++ + G EPD +TY T+I GYC L
Sbjct: 499 TYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKL 547



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 242/536 (45%), Gaps = 76/536 (14%)

Query: 90  MVIQFGKTYNFFRLFRDSL--GDFGCDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYL 145
           ++ + G+ +    L+ D L  G     Y+F  +I  + ++ K+ E+ E F  M ++G   
Sbjct: 473 LLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELG--F 530

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVI 205
            PD V                              Y  L++G  + G +E AF +  ++ 
Sbjct: 531 EPDGV-----------------------------TYRTLIDGYCKLGNVEEAFKVKEKME 561

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           +   +P+I   N ++  L  + +      L   + L G  PNVVT+ TLI  +C E +L+
Sbjct: 562 KEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLD 621

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           KAF  Y  M+E    P++II S ++  L++ GR+ E N LL   ++  + LD   F  + 
Sbjct: 622 KAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLH 681

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
            A  G  D  +   T D       LPN + Y+I I GLC+ G++ +A  +F  +L+R   
Sbjct: 682 KADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFS 741

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
           P   TY +LI G+  +G + D FSL D M+KRGL P                        
Sbjct: 742 PDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAP------------------------ 777

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
                 N+  +N L++G C+        KLF  + +  + P+VI++ +LI G    G+  
Sbjct: 778 ------NIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTR 831

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ L  +MLK G++P +ITYSA+I+G  K  ++    ++   M       +IA +  L+
Sbjct: 832 EALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLV 891

Query: 566 NMLIKECNLDAALKLF----------GQLTDRGLEPDIITYNTIICGYCSLNSCLI 611
              +K   +    KL           G ++ + +E D+ +    +   C ++ CL+
Sbjct: 892 EGHVKCGEVKKIAKLHNMMHITIPCAGVISHKQMELDVFSNAKEMLKLC-VDGCLV 946



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 136/544 (25%), Positives = 242/544 (44%), Gaps = 72/544 (13%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD--------SNSVGQYYKL 169
           LI  Y + G++ E+  +   M D    L P+      S L+D        + ++  Y ++
Sbjct: 365 LINGYCKNGQVSEAERLLMRMVDWD--LEPESYS--YSTLMDGFCREGLVTKAISVYNEM 420

Query: 170 CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT-------------- 215
            R         +  L+ GL R G  E+A H+   +++RG  P+ V+              
Sbjct: 421 LRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEF 480

Query: 216 ------CNKILKR---------------LCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
                  N IL R                C   ++  A   F+ +  +G +P+ VT+ TL
Sbjct: 481 FRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTL 540

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I+ +CK   +E+AF++   M +  ++P + +Y+ LI GLFK+ + +E  +LL     +GL
Sbjct: 541 IDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGL 600

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             +VV + +++  +   G + +A   Y  M+  GF PNVI  S ++  L + GR+ EA  
Sbjct: 601 SPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANM 660

Query: 375 LFGQVL----------IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           L  +++            RL  +        DG   S K+ D     D   K    P++V
Sbjct: 661 LLQKMVNLDVFLDHGYFDRLHKA-------DDGNLDSQKIADTL---DESSKSFSLPNSV 710

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           V ++ I GL     + DA + F   +     P+ F + TL+ G        D   L   M
Sbjct: 711 VYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEM 770

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               + P++IT+  LI G+   G+L  A  LF ++  +GL P+VI+Y+ +I G  K  N 
Sbjct: 771 LKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNT 830

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              L +   M + G++P +  Y+ L+    K+ ++  A  L  ++ +   + +I  +  +
Sbjct: 831 REALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKL 890

Query: 600 ICGY 603
           + G+
Sbjct: 891 VEGH 894


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 228/430 (53%), Gaps = 6/430 (1%)

Query: 177 GFCVYEFLMNGLLR-KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           G   Y  +++  +R K  I  A ++ ++++Q    PN+ T N +++  C+ G +  A   
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRF 227

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           FD +   G  PNVVT++TLI+ +CK  K++  F+L   M    L P+LI Y+++I+GL +
Sbjct: 228 FDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCR 287

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            GR+KE + +L     RG  LD V +++++  Y   G+  +A+  +  ML  G  P+VI+
Sbjct: 288 EGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVIT 347

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI  +C+ G +  A     Q+ +R L P+  TY++L+DGF + G + + + +   MI
Sbjct: 348 YTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMI 407

Query: 416 KRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G  P  V  + LIN     G M DA+          L P++  ++T++ G CR     
Sbjct: 408 DNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVD 467

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + +++   M    IKPD IT++ LI+G   Q     A  LF +ML+ GL PD  TY+A+I
Sbjct: 468 EALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALI 527

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +      ++   + +   M   GV PD+  Y+VL+N L K+     A +L  +L      
Sbjct: 528 NAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESV 587

Query: 591 PDIITYNTII 600
           P  +TY+T+I
Sbjct: 588 PSDVTYHTLI 597



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 258/524 (49%), Gaps = 41/524 (7%)

Query: 104 FRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSC 156
           F D +   GC      Y+ LI+ Y ++ KID+  E+   M+  G  L P+L+    +++ 
Sbjct: 227 FFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG--LEPNLISYNVVING 284

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFH----MHRQVIQRGFVPN 212
           L     + +   +   M  +G+ + E   N L++    E  FH    MH ++++ G  P+
Sbjct: 285 LCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPS 344

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           ++T   ++  +C  G +  A+   D + + G  PN  T++TL++ F ++  + +A+++  
Sbjct: 345 VITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLK 404

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M++    P ++ Y+ LI+G   AG++ +   +L    ++GL  DVV +S+V+  +    
Sbjct: 405 EMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSY 464

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           DV  A++   +M+  G  P+ I+YS LI+G C+Q R  EAC LF ++L   L P   TY+
Sbjct: 465 DVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYT 524

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA---------LRFFFQ 443
           +LI+ +C  G L+    L++ M+++G+ PD V  S+LINGL   A         L+ F++
Sbjct: 525 ALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYE 584

Query: 444 SVRMTLIPNLFIFNTLMDGCCRL--KRATDTVKLFMLMGMY-------------NIKPDV 488
                 +P+   ++TL++ C  +  K     +K F + GM              N KPD 
Sbjct: 585 ES----VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDG 640

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
             + V+I G    G +  A  L+ +M+K G     +T  A++  L K   ++    +   
Sbjct: 641 TAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIAN 700

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           + R+    +     VL+ +  +E N+D  L +  ++   G  P+
Sbjct: 701 VLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 203/449 (45%), Gaps = 45/449 (10%)

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
           S+ + Y LC +       V++ ++    R  +I+ A  +       GF+P +++ N +L 
Sbjct: 122 SLQETYDLCNSTSS----VFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLD 177

Query: 222 RLCINGQ-IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
               + + I  A ++F  +L     PNV T++ LI  FC    L+ A + ++ M +   +
Sbjct: 178 ATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCL 237

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+++ Y+ LIDG  K           L  +D G +L                        
Sbjct: 238 PNVVTYNTLIDGYCK-----------LRKIDDGFEL------------------------ 262

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
              M   G  PN+ISY+++I GLC++GR+ E   +  ++  R      +TY++LI G+CK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCK 322

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFI 455
            G       ++  M++ GL P  +  + LI+     G M  A  F  Q     L PN   
Sbjct: 323 EGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           + TL+DG  +     +  ++   M      P V+T+  LI G    G +  AI +   M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK 442

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           ++GLTPDV++YS ++ G  +  ++   L + + M   G+ PD   Y+ L+    ++    
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            A  LF ++   GL PD  TY  +I  YC
Sbjct: 503 EACDLFDEMLRVGLPPDEFTYTALINAYC 531



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 517 RGLTPDVITYSAIIHGLFKGK-NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            G  P V++Y+A++    + K NIS   ++FK M ++ V+P++  YN+L+       NLD
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLD 222

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGY 614
            AL+ F ++  +G  P+++TYNT+I GYC L   + DG+
Sbjct: 223 VALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRK-IDDGF 260


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/497 (30%), Positives = 246/497 (49%), Gaps = 13/497 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI +  R GK + ++E+ A M   G   +      L+ CL  +    +  +L   MR
Sbjct: 47  YSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR 106

Query: 175 GKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             G CV     Y  L++ L + G +  AF +  ++ +RG VP+  T N ++  L   G+ 
Sbjct: 107 DNG-CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRS 165

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  L + +   G  P+V+T+S+LI    K+ +  KAF+L+  M      PD I ++ L
Sbjct: 166 QKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTAL 225

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           +D L KAGR+ +  ELL    +RG+K  VV +++++  +  +GD+  A    D M   G 
Sbjct: 226 MDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGC 285

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V++YS LI GL +  +L EAC +  ++      P  +TY++LI+G  K+G L D   
Sbjct: 286 KPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGR 345

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALR------FFFQSVRMTLIPNLFIFNTLMDGC 463
           L+D M  +G  PD V  S LI  L G A R       F +   + + P+LF + +++   
Sbjct: 346 LFDRMKSKGCNPDVVTYSTLITAL-GKAARVESACVLFEEMESVGIQPDLFTYCSIITVL 404

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            +  +  D  +LF  M    + PDVIT+   +  +   G    A  +F  M + GL PDV
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY A++ GL K K +     + K +   G A D   ++  L +L    N+D A +L   
Sbjct: 465 ATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQF 524

Query: 584 LTDRGLEPDIITYNTII 600
              +GL P   +YN +I
Sbjct: 525 ANSKGLWPGASSYNALI 541



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 217/427 (50%), Gaps = 5/427 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+N L R G  E A  +  ++  +G  PN+ T N ++  L   GQ   A  L   + 
Sbjct: 47  YSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR 106

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+V T++ LI+   K  +L +AF L+  M E   VPD   Y+ LI GL K GR +
Sbjct: 107 DNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQ 166

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +  ELL      G   DV+ +SS++      G+  +A + +  M   G  P+ I+++ L+
Sbjct: 167 KAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALM 226

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             L + GR+ +A  L  ++  R ++P ++TY++LI GF K G L + ++L D M + G K
Sbjct: 227 DALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCK 286

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V  S LI GL     + +A +   +  +    P+   +NTL++G  +     D  +L
Sbjct: 287 PDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRL 346

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M      PDV+T++ LI  +     + SA +LF +M   G+ PD+ TY +II  L K
Sbjct: 347 FDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGK 406

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +     +F  M   G++PD+  YN  LN L +      A K+F  + + GL PD+ T
Sbjct: 407 AGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466

Query: 596 YNTIICG 602
           Y+ ++ G
Sbjct: 467 YDALLLG 473



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 227/446 (50%), Gaps = 17/446 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+N L + G  E A  +  ++    + P++V+ + ++  L   G+   A  +   +
Sbjct: 11  TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KPN+ T++TL++   K  + ++A +L   M +   VPD+  Y+ LI  L KAGRL
Sbjct: 71  QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL 130

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR---AVQTYDRMLNGGFLPNVISY 356
            E   L     +RG   D   ++S++    G+G VGR   A++  + M   G  P+V++Y
Sbjct: 131 SEAFTLFAEMRERGCVPDTFTYNSLI---YGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           S LI GL + G  V+A  LF ++  R  +P  +T+++L+D   K+G++ D   L D M +
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247

Query: 417 RGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           RG+KP  V  + LI G   +GD   A     +  R    P++  ++ L+ G  +  +  +
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             ++   M      PD IT+  LI G+   G L+ A  LF +M  +G  PDV+TYS +I 
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLIT 367

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            L K   +     +F+ ME  G+ PD+  Y  ++ +L K   +D A +LF ++  +GL P
Sbjct: 368 ALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSP 427

Query: 592 DIITYNTIICGYCSLNSCLIDGYFKS 617
           D+ITYN        LNS    G FK 
Sbjct: 428 DVITYNAF------LNSLGRGGRFKE 447



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 5/362 (1%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P PNVVT+++L+NA  K  + E+A  L+  +      PD++ YS LI+ L +AG+ +   
Sbjct: 5   PSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAAL 64

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           E++     +G K ++  +++++D     G    A++    M + G +P+V +Y+ LI  L
Sbjct: 65  EVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
            + GRL EA  LF ++  R   P   TY+SLI G  K G+ +    L + M + G  PD 
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV 184

Query: 424 VVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  S LI GL  D     A + F +  R    P+   F  LMD   +  R  D ++L   
Sbjct: 185 MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDE 244

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    +KP V+T+  LI G    G L  A  L  +M + G  PDV+TYS +I GL K   
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     + K ME+ G  PD   YN L+N L K   L+ A +LF ++  +G  PD++TY+T
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYST 364

Query: 599 II 600
           +I
Sbjct: 365 LI 366



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 179/382 (46%), Gaps = 43/382 (11%)

Query: 95  GKTYNFFRLF----RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           G+T   F+LF    R         ++ L++   + G++D+++E+   M + G+       
Sbjct: 198 GETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTY 257

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L++       + + Y L   M+  G       Y  L+ GL++   ++ A  + +++ +
Sbjct: 258 NALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEK 317

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P+ +T N ++  L   G + +A  LFD +   G  P+VVT+STLI A  K A++E 
Sbjct: 318 EGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVES 377

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  L+  M  + + PDL  Y  +I  L KAG++ + + L      +GL  DV+ +++ ++
Sbjct: 378 ACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLN 437

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL------ 380
           +    G    A + ++ M   G LP+V +Y  L+ GL +   + +ACGL  +++      
Sbjct: 438 SLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAF 497

Query: 381 -----------------------------IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
                                         + L P   +Y++LID   K+G++ + F+  
Sbjct: 498 DSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTL 557

Query: 412 DNMIKRGLKPDAVVCSLLINGL 433
           +++ ++G KPD V  S LI+ L
Sbjct: 558 EDLKEQGGKPDIVSYSSLISAL 579



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 162/348 (46%), Gaps = 15/348 (4%)

Query: 86  VFDKMVIQFGKTYNFFRLFR--DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYM 138
            ++ ++  FGK  +    +   D +   GC      YS LI   ++  ++DE+ ++   M
Sbjct: 256 TYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKM 315

Query: 139 SDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKG 192
              G    PD +    L++ L  +  +    +L   M+ KG       Y  L+  L +  
Sbjct: 316 EKEGC--PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAA 373

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            +E+A  +  ++   G  P++ T   I+  L   GQ+ +A  LF  +   G  P+V+T++
Sbjct: 374 RVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYN 433

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
             +N+  +  + ++A +++  M E  L+PD+  Y  L+ GL K   + +   LL   +++
Sbjct: 434 AFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQ 493

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G   D + F   ++     G+V  A +      + G  P   SY+ LI  L + GR+ EA
Sbjct: 494 GCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEA 553

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
                 +  +  +P +++YSSLI    ++G++   F L + M KRGLK
Sbjct: 554 FNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLK 601



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 77/152 (50%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN+  +N+L++   +  +  +   LF  +      PDV++++ LI  +   G   +A+ +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
             +M  +G  P++ TY+ ++  L K       L +   M  NG  PD+  YN L++ L K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
              L  A  LF ++ +RG  PD  TYN++I G
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYG 158



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 148/364 (40%), Gaps = 35/364 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           NA++A   K  +   A             P++     LI  L+++   D A  V  KM  
Sbjct: 258 NALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEK 317

Query: 93  QFGK----TYNFF--------------RLFRDSLGDFGCD-----YSFLIENYVRIGKID 129
           +       TYN                RLF D +   GC+     YS LI    +  +++
Sbjct: 318 EGCPPDTITYNTLINGLGKAGLLNDAGRLF-DRMKSKGCNPDVVTYSTLITALGKAARVE 376

Query: 130 ESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEF 183
            +  +F  M  +GI   PDL     +++ L  +  V    +L   MRGKG       Y  
Sbjct: 377 SACVLFEEMESVGI--QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
            +N L R G  + A  +   + + G +P++ T + +L  L    ++ +A  L   L+  G
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
              + + F   +        +++A +L        L P    Y+ LID L KAGR+ E  
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAF 554

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
             L    ++G K D+V +SS++ A    G +  A +  + M   G   +  SYS L++ L
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614

Query: 364 CQQG 367
              G
Sbjct: 615 QDWG 618


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 237/468 (50%), Gaps = 33/468 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ Y ++G+IDE+  +   MS  G  + P+L+    +++ L    S+ + +++   
Sbjct: 48  YNTLIDAYCKMGRIDEAFGLLKSMSSKG--MQPNLISYNVIINGLCREGSMKEAWEILEE 105

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KGF      Y  L+NG  ++G    A  +H ++++ G  P++VT   ++  +C    
Sbjct: 106 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 165

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A   FD + + G +PN  T++TLI+ F ++  L +A+++ N M E    P ++ Y+ 
Sbjct: 166 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 225

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            I G     R++E   ++   +++GL  DVV +S+++  +   G++ RA Q    M+  G
Sbjct: 226 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 285

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ ++YS LI+GLC+  RL EAC L  ++L   L P   TY++LI+ +C  G L    
Sbjct: 286 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 345

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D MI +G  PDAV  S+LINGL       +A R  F+ +    +P+   ++TL++ C
Sbjct: 346 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 405

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
             +                    +  +   LI+G   +G +  A  +F  M++R   P  
Sbjct: 406 SNI--------------------EFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGE 445

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             Y+ IIHG  +G N+    +++K M  +G  P       L+  L KE
Sbjct: 446 AVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKE 493



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 208/395 (52%), Gaps = 5/395 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN+ T N +++  C  G++      F  +   G  PNVVT++TLI+A+CK  ++++AF L
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M    + P+LI Y+++I+GL + G +KE  E+L     +G   D V ++++++ Y  
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G+  +A+  +  M+  G  P+V++Y+ LI  +C+   L  A   F Q+ IR L P+  T
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSV 445
           Y++LIDGF + G L + + + + M + G  P  V  +  I+G      M +AL    + V
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              L P++  ++T++ G CR        ++   M    + PD +T++ LI+G+     L+
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  L  +ML  GL PD  TY+ +I+      +++  LH+   M   G  PD   Y+VL+
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           N L K+     A +L  +L      P  +TY+T+I
Sbjct: 368 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 217/441 (49%), Gaps = 20/441 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++   + G I+ AF + + +  +G  PN+++ N I+  LC  G +  A  + + +
Sbjct: 47  TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 106

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+ VT++TL+N +CKE    +A  ++  M+   + P ++ Y+ LI+ + KA  L
Sbjct: 107 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 166

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               E       RGL+ +   +++++D +   G +  A +  + M   GF P+V++Y+  
Sbjct: 167 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 226

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C   R+ EA G+  +++ + L P +++YS++I GFC+ G+L   F +   M+++G+
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PDAV  S LI GL     + +A     + + M L P+ F + TL++  C        + 
Sbjct: 287 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 346

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH--- 531
           L   M      PD +T++VLI G+  Q     A  L F+++     P  +TY  +I    
Sbjct: 347 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 406

Query: 532 --------GLFKGKNISVGLH----MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
                    L KG  +   +H    +F+ M      P  A+YNV+++   +  NL  A  
Sbjct: 407 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466

Query: 580 LFGQLTDRGLEPDIITYNTII 600
           L+ ++   G  P  +T  T+I
Sbjct: 467 LYKEMIHSGFVPHTVTVITLI 487



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 166/295 (56%), Gaps = 5/295 (1%)

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +V  ++ ++  +  +G++ + +  +  M   G LPNV++Y+ LI   C+ GR+ EA GL 
Sbjct: 9   NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 68

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
             +  + ++P+L++Y+ +I+G C+ G +++ + + + M  +G  PD V  + L+NG   +
Sbjct: 69  KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 128

Query: 437 -----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
                AL    + VR  + P++  +  L++  C+ +     ++ F  M +  ++P+  T+
Sbjct: 129 GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 188

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           T LI G + QG L+ A  +  +M + G +P V+TY+A IHG    + +   L + + M  
Sbjct: 189 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 248

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            G+APD+  Y+ +++   ++  LD A ++  ++ ++G+ PD +TY+++I G C +
Sbjct: 249 KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 303



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 141/259 (54%), Gaps = 5/259 (1%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV +Y+ILI+G C  G L +  G FG++      P+++TY++LID +CK G++ + F L
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
             +M  +G++P+ +  +++INGL     M +A     +       P+   +NTL++G C+
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                  + +   M    + P V+T+T LI  +    +L+ A+  F QM  RGL P+  T
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ +I G  +   ++    +   M  +G +P +  YN  ++       ++ AL +  ++ 
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247

Query: 586 DRGLEPDIITYNTIICGYC 604
           ++GL PD+++Y+TII G+C
Sbjct: 248 EKGLAPDVVSYSTIISGFC 266



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 77/160 (48%)

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           +R  + PN++ +N L+ G C +      +  F  M      P+V+T+  LI      G +
Sbjct: 2   IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRI 61

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  L   M  +G+ P++I+Y+ II+GL +  ++     + + M   G  PD   YN L
Sbjct: 62  DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 121

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           LN   KE N   AL +  ++   G+ P ++TY  +I   C
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMC 161



 Score = 45.8 bits (107), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           M R+ V+P++  YN+L+        L   L  FG++   G  P+++TYNT+I  YC +
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKM 58


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 160/593 (26%), Positives = 274/593 (46%), Gaps = 66/593 (11%)

Query: 52  IQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSL 108
           ++  + T  C  SPN+   + LI  L  +   + A  V+++MV   G + N F       
Sbjct: 368 VELMRRTEGC--SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRF------- 418

Query: 109 GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK 168
                 Y+FL+E   + G      + F  M +     S      + S  VD   V    +
Sbjct: 419 -----TYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWP--IHSPEVDFLMV----Q 467

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +CR         Y  L+ GL + G++ +A  +   +I+ G  P+++T N +L  LC   +
Sbjct: 468 VCRPT----LVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQR 523

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +A ++F   L  G +PNVVT+STLI+   K AK+++A QL   M+E+    + + YS 
Sbjct: 524 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 583

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++DGL K GR+++   +L    D G   D V +++++D +     +  AV     ML  G
Sbjct: 584 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 643

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F P+V++Y+ L  GLC+ GR  EA  +   +  R   P+ +TYSS++DG CK+G++ +  
Sbjct: 644 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 703

Query: 409 SLYDNMIK-RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             ++ M +   + P  +  S LI+GL     + +A  F  + +R   IP++  F+ L++G
Sbjct: 704 GYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILING 763

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP- 521
            C   R    ++LF  M     K D+  +  +I     +G  S+A  L  +M   G+   
Sbjct: 764 LCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKN 823

Query: 522 --------------------------------DVITYSAIIHGLFKGKNISVGLHMFKLM 549
                                           D I+Y+ +I  L   +     L + + M
Sbjct: 824 TVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAM 883

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +G +PD   Y  +++ L K  + + A KL  ++  RG  PD+ TY  +I G
Sbjct: 884 VADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISG 936



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/606 (25%), Positives = 274/606 (45%), Gaps = 89/606 (14%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVI 92
           +++L  L + +    AIQ  K    CV  PN+     L++ L Q+   D A  +FD M  
Sbjct: 282 SSLLHGLCQAHRLEEAIQLLK-AMPCV--PNVVCFNSLMNGLCQARRVDEAFELFDVM-- 336

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
                            + GC      Y+ L++   ++ +I E+      M       SP
Sbjct: 337 ----------------KESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTE-GCSP 379

Query: 148 DLV--QRLMSCLVDSNSVGQYYKLCRAMRG-KGFC----VYEFLMNGLLRKGVIENAFHM 200
           ++V    L+  L ++  V Q +++   M   +G       Y FL+ GL + G        
Sbjct: 380 NVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQC 439

Query: 201 HRQVIQRGFV---------------------PNIVTCNKILKRLCINGQIGNASSLFDVL 239
             Q+++R +                      P +VT N ++  L  +G + +A  L + +
Sbjct: 440 FEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFM 499

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  P+V+TF+++++  CKE ++  A  ++   +E    P+++ YS LIDGL K  ++
Sbjct: 500 IESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKM 559

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +LL   ++ G + + V +S+V+D  + +G +  AV    +M + G LP+ ++Y+ L
Sbjct: 560 DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL 619

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G  ++ RL EA GL  ++L     PS++TY++L  G C+SG+  +   + D M  RG 
Sbjct: 620 IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 679

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
            P+A+                               +++++DG C+  R T+ +  F  M
Sbjct: 680 APNAIT------------------------------YSSIVDGLCKAGRVTEALGYFEKM 709

Query: 480 GMYNI-KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
               +  P VI ++ LI G+   G +  A     +M++ G  PDV+T+S +I+GL     
Sbjct: 710 ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 769

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           I  GL +F  M   G   DI  YN ++N    +    AA  L  ++   G+  + +T+  
Sbjct: 770 IDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGI 829

Query: 599 IICGYC 604
           +I   C
Sbjct: 830 VIKALC 835



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 238/495 (48%), Gaps = 40/495 (8%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            YS LI+   ++ K+DE++++ A M ++G                           CRA  
Sbjct: 546  YSTLIDGLSKMAKMDEALQLLAKMVELG---------------------------CRA-- 576

Query: 175  GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                  Y  +++GLL+ G +E+A  + RQ+   G +P+ VT N ++       ++  A  
Sbjct: 577  --NTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 634

Query: 235  LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            L   +L  G  P+VVT++TL +  C+  + ++A ++ + M      P+ I YS ++DGL 
Sbjct: 635  LLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC 694

Query: 295  KAGRLKEG-NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            KAGR+ E        A D  +   V+ +S+++D     G +  A +  +RM+  G +P+V
Sbjct: 695  KAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDV 754

Query: 354  ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            +++SILI GLC  GR+     LF  +  R  +  +  Y+++I+ +C  G+    ++L + 
Sbjct: 755  VTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEE 814

Query: 414  MIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            M   G+  + V   ++I  L G    D    +F S+       +  +NTL+      +R+
Sbjct: 815  MKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEIS-YNTLITSLVASRRS 873

Query: 470  TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
               ++L   M      PD   +  ++ G+   GS   A  L  +M  RG +PD+ TY+ +
Sbjct: 874  EQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIM 933

Query: 530  IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            I GL K K + +    F+ M R  + PD  +Y+ L++   K   +D A KL   L   G+
Sbjct: 934  ISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGI 990

Query: 590  EPDIITYNTIICGYC 604
            EP I  Y+T++   C
Sbjct: 991  EPTITMYSTMVDSLC 1005



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 263/557 (47%), Gaps = 73/557 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-------NSVGQYY 167
           ++ L+     +G++DE+   F +   + I  +PD V    + +VD         + G   
Sbjct: 144 HTVLLHALCELGRVDEA--WFFFQQVLLIGFTPDAVT--YNTMVDGLYKAGRLEAAGMVL 199

Query: 168 KL-CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           +L   +        +   ++GL + G +  A+     + Q G  PN VT + ++  LC  
Sbjct: 200 QLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKA 259

Query: 227 GQIGNA----------------SSLFD------------VLLLVGP-KPNVVTFSTLINA 257
           G++  A                SSL               LL   P  PNVV F++L+N 
Sbjct: 260 GKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNG 319

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG-NELLLTALDRGLKL 316
            C+  ++++AF+L+++M E     D+I Y+IL+ GL K  R+ E    + L     G   
Sbjct: 320 LCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSP 379

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQG--RLVEAC 373
           +VV FS+++      G V +A + Y+RM+   G  PN  +Y+ L++GLC+ G  R +E C
Sbjct: 380 NVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQC 439

Query: 374 GLFGQVLIRRLE---------------------PSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             F Q+L R                        P+L+TY++L+ G  KSG +RD   L +
Sbjct: 440 --FEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLE 497

Query: 413 NMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            MI+ GL PD +  + +++GL       DA   F +++     PN+  ++TL+DG  ++ 
Sbjct: 498 FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 557

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  + ++L   M     + + +T++ ++ G+   G +  A+++  QM   G  PD +TY+
Sbjct: 558 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 617

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I G FK + +   + + + M   G  P +  Y  L + L +    D A+++   +  R
Sbjct: 618 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 677

Query: 588 GLEPDIITYNTIICGYC 604
           G  P+ ITY++I+ G C
Sbjct: 678 GCAPNAITYSSIVDGLC 694



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 163/630 (25%), Positives = 281/630 (44%), Gaps = 119/630 (18%)

Query: 93  QFGKTYNFFRLFRDSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G+  + F  FR ++  FG       YS +I+   R  ++D+  ++   M+  G   + 
Sbjct: 13  KAGRVCDAFTAFRKAI-QFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNA 71

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQ 203
                L++ L+      + + L   M   G       +  ++ GL ++G IE AF +  +
Sbjct: 72  VTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDE 131

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           ++ RGFVP++     +L  LC  G++  A   F  +LL+G  P+ VT++T+++   K  +
Sbjct: 132 MVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGR 191

Query: 264 LEKA-----------------------------------FQLYNLMMEMDLVPDLIIYSI 288
           LE A                                   ++ ++ M +  + P+ + Y  
Sbjct: 192 LEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDA 251

Query: 289 LIDGLFKAGR-------LKEGNEL--------LLTALDRGLKLD--------------VV 319
           LIDGL KAG+       L++ N          LL  L +  +L+              VV
Sbjct: 252 LIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVV 311

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            F+S+M+       V  A + +D M   G   +VI+Y+IL+KGLC+  R+ EA   +  V
Sbjct: 312 CFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEA---YRHV 368

Query: 380 -LIRRLE---PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK-RGLKPDAVVCSLLINGL- 433
            L+RR E   P+++T+S+LI G C +G++   + +Y+ M+   G+ P+    + L+ GL 
Sbjct: 369 ELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLC 428

Query: 434 -MGDALRF---FFQSVR---------------------MTLIPNLFIFNTLMDGCCRLKR 468
             GD+ R    F Q +                          P L  +NTL+ G  +   
Sbjct: 429 KAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGM 488

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             D + L   M    + PDVIT   ++ G+  +  +  A  +F + L+RG  P+V+TYS 
Sbjct: 489 VRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 548

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I GL K   +   L +   M   G   +   Y+ +++ L+K   ++ A+ +  Q+ D G
Sbjct: 549 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 608

Query: 589 LEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
             PD +TYNT           LIDG+FK Q
Sbjct: 609 CLPDAVTYNT-----------LIDGFFKRQ 627



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 232/482 (48%), Gaps = 61/482 (12%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NGL + G + +AF   R+ IQ GF P +VT + ++  LC + ++     L + +
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  PN VT++TL+NA   + + ++AF L   M      P+LI + ++I GL K G +
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +    ++   +DRG   DV + + ++ A   +G V  A   + ++L  GF P+ ++Y+ +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRL-EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           + GL + GRL EA G+  Q+L      P++ T++  +DG  K+G L   +  +D+M + G
Sbjct: 183 VDGLYKAGRL-EAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 419 LKPDAVVCSLLINGLM----------------GDALRFFFQSV----------------- 445
           + P+ V    LI+GL                   A  F F S+                 
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLL 301

Query: 446 -RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
             M  +PN+  FN+LM+G C+ +R  +  +LF +M       DVIT+ +L++G+     +
Sbjct: 302 KAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRI 361

Query: 505 SSAILLFFQMLKR--GLTPDVITYSAIIHGLFKGKNISVGLHMF-KLMERNGVAPDIAIY 561
             A     ++++R  G +P+V+T+S +I GL     ++    ++ +++   G++P+   Y
Sbjct: 362 PEA-YRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTY 420

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGL---------------------EPDIITYNTII 600
             LL  L K  +     + F Q+ +R                        P ++TYNT++
Sbjct: 421 AFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLV 480

Query: 601 CG 602
            G
Sbjct: 481 TG 482



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 172/358 (48%), Gaps = 34/358 (9%)

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           ++ Y++LI+GL KAGR+ +       A+  G +  VV +S+V+D      +V +  +  +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M   G  PN ++Y+ L+  L  QGR  EA  L  ++      P L+T+  +I G CK G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMT-LIPNLFIFN 457
           ++   F + D M+ RG  PD  + ++L++ L      D   FFFQ V +    P+   +N
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           T++DG  +  R      +  L+      P V T T+ + G++  G+L+ A   F  M + 
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 518 GLTPDVITYSAIIHGLFKG------------KNISVGLHMF-----------------KL 548
           G++P+ +TY A+I GL K             KN   G+  F                 +L
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQL 300

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           ++     P++  +N L+N L +   +D A +LF  + + G   D+ITYN ++ G C L
Sbjct: 301 LKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKL 358



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 182/408 (44%), Gaps = 54/408 (13%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD--------SNSVGQY 166
            Y+ L     R G+ DE+VEI  YM+  G   +P+ +    S +VD        + ++G +
Sbjct: 651  YTTLCHGLCRSGRFDEAVEILDYMAARGC--APNAIT--YSSIVDGLCKAGRVTEALGYF 706

Query: 167  YKLCR-AMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
             K+ R  +       Y  L++GL + G I+ A+    ++I+ G +P++VT + ++  LC 
Sbjct: 707  EKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCD 766

Query: 226  NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL------ 279
             G+I     LF  +   G K ++  ++ +INA+C + +   A+ L   M    +      
Sbjct: 767  AGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVT 826

Query: 280  -----------------------VP----DLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
                                   +P    D I Y+ LI  L  + R ++  ELL   +  
Sbjct: 827  HGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVAD 886

Query: 313  GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            G   D   + +VMD     G    A +    M + G  P++ +Y+I+I GL +  +L  A
Sbjct: 887  GGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLA 946

Query: 373  CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            C  F ++L + L+P  + YSSLID FCK+ K+ D + L   +   G++P   + S +++ 
Sbjct: 947  CDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDS 1003

Query: 433  LMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            L  +     AL    +       P + I+ +L        R  + VKL
Sbjct: 1004 LCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKL 1051



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 140/339 (41%), Gaps = 44/339 (12%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
            YS LI+   + G+IDE+ E    M   G    PD+V    L++ L D+  +    +L   
Sbjct: 722  YSALIDGLCKAGRIDEAYEFLERMIRAGRI--PDVVTFSILINGLCDAGRIDTGLELFCG 779

Query: 173  MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            M  +G       Y  ++N    KG    A+ +  ++   G   N VT   ++K LC N +
Sbjct: 780  MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839

Query: 229  IGNASSLFD---------------------------------VLLLVGPKPNVVTFSTLI 255
            I  A S F                                   ++  G  P+   + T++
Sbjct: 840  IDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVM 899

Query: 256  NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
            +   K    E A +L   M      PDL  Y+I+I GL KA +L    +     L + LK
Sbjct: 900  DGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLK 959

Query: 316  LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
             D +V+SS++DA+     V  A   +  + + G  P +  YS ++  LC+     +A  +
Sbjct: 960  PDAIVYSSLIDAFCKADKVDDA---WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEV 1016

Query: 376  FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
              ++  +  EP +  ++SL   +   G++ +   L +++
Sbjct: 1017 IREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 78/167 (46%)

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  +N L++G C+  R  D    F     +  +P V+T++ +I G+     +     L  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M  RG  P+ +TY+ +++ L           + + M  NG  P++  + +++  L KE 
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            ++AA ++  ++ DRG  PD+  +  ++   C L       +F  Q+
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV 167


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 255/495 (51%), Gaps = 17/495 (3%)

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV- 180
           +  +G +  S  IF  +   G  L    +  ++  L  +  V +  +    +   GF + 
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 181 ---YEFLMNGLLRKGVIENAFHMHRQVIQR------GFV--PNIVTCNKILKRLCINGQI 229
              Y  L+NGL   G +  A ++ R + +       GF    N+V  + ++  LC NG +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
                 ++ ++  G  PN  T+ +LI   C   K  + F L + M+   L   + ++++L
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDGL K G L E  E+    ++RG + ++V  +++M  Y   G+V  A + +D +   GF
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             +V +Y++ I G C+ GR+ +A  +F ++    + P+++TY+SLID  CK+G++   + 
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           +   M + GL PD V C +L++GL     +  A+  F Q V   L P+++ +  L+ GCC
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
             +R  + + L   M + N+ P ++T++ LI G+   G +S+A  L  +M  +G  PD I
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TYS ++  L+K +++   + +F  M + G+ PD+  Y ++++   K   +D A+ LF ++
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561

Query: 585 TDRGLEPDIITYNTI 599
             + L PDI+TY  +
Sbjct: 562 HMKNLVPDIVTYTIL 576



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 221/434 (50%), Gaps = 13/434 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++ GL   G +  A   H +++  GF  N V+   ++  LC NG++  A +L  ++    
Sbjct: 113 VLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEK 172

Query: 244 P--------KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
                    K NVV +S +I+  C+   +++ F+ YN MM   + P+   Y  LI GL  
Sbjct: 173 EKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCG 232

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G+  EG  L+   + RGL + V VF+ ++D     G +  A + +D M+N G+ PN+++
Sbjct: 233 VGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVT 292

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
            + L+ G C +G +  A  LF  +     +  + TY+  I G+CK G++RD   ++D M 
Sbjct: 293 CTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMC 352

Query: 416 KRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G+ P+ V  + LI+     G +  A        R  L P++     L+DG C+ KR  
Sbjct: 353 REGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLD 412

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + LF  +    + PDV ++T+LI G  +   +  A+ L   M  + L P ++TYS +I
Sbjct: 413 QAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLI 472

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL +   IS    +   M   G  PD   Y++LL+ L K+ +LD A+ LF Q+  RGLE
Sbjct: 473 DGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLE 532

Query: 591 PDIITYNTIICGYC 604
           PD++ Y  +I GYC
Sbjct: 533 PDVMCYTIMIDGYC 546



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 214/427 (50%), Gaps = 5/427 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y  +++ L R G ++  F  + +++  G  PN  T   +++ LC  G+      L D +
Sbjct: 187 MYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEM 246

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G   +V  F+ LI+  CK   L +A ++++ M+     P+++  + L+ G    G +
Sbjct: 247 IRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNV 306

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               EL     + G K DV  ++  +  Y  +G V  AV+ +D M   G +PN+++Y+ L
Sbjct: 307 DMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSL 366

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC+ G +  A  +   +    L P ++T   L+DG CKS +L     L++ +++ GL
Sbjct: 367 IDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGL 426

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    ++LI+G      MG+A+          L+P++  ++ L+DG CR  R ++  +
Sbjct: 427 TPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWR 486

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M +    PD IT+++L+  +  +  L  A+ LF QM+KRGL PDV+ Y+ +I G  
Sbjct: 487 LLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYC 546

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K + I   +++F+ M    + PDI  Y +L N + K  +     K    + D    P ++
Sbjct: 547 KSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVL 606

Query: 595 TYNTIIC 601
            Y   +C
Sbjct: 607 KYLAALC 613



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 214/400 (53%), Gaps = 9/400 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM- 173
           YS +I+   R G +DE  E +  M   G+  +      L+  L       + + L   M 
Sbjct: 188 YSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMI 247

Query: 174 -RGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            RG    VY F  L++GL + G++  A  M  +++ RG+ PNIVTC  ++   C+ G + 
Sbjct: 248 RRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVD 307

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LFD +   G K +V T++  I+ +CK  ++  A ++++ M    +VP+++ Y+ LI
Sbjct: 308 MARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLI 367

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L KAG +    E++ T    GL  D+V    ++D       + +A+  +++++  G  
Sbjct: 368 DCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLT 427

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V SY+ILI G C   R+ EA  L   + ++ L P ++TYS LIDG C+SG++ + + L
Sbjct: 428 PDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRL 487

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            + M  +G  PD +  S+L++ L     + +A+  F Q ++  L P++  +  ++DG C+
Sbjct: 488 LNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCK 547

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
            +R  + + LF  M M N+ PD++T+T+L   +   GS S
Sbjct: 548 SERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNS 587



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 167/345 (48%), Gaps = 50/345 (14%)

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           L RG  LD V  ++V+      G V +A++ +D ++N GF  N +SY ILI GLC+ GR+
Sbjct: 99  LKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRV 158

Query: 370 VEACGL-------------------------------------------FGQVLIRRLEP 386
            EA  L                                           + +++   + P
Sbjct: 159 NEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCP 218

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFF 441
           +  TY SLI G C  GK  +GF L D MI+RGL     V ++LI     NG++ +A   F
Sbjct: 219 NEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMF 278

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK-LFMLMGMYNIKPDVITHTVLIRGIAS 500
            + V     PN+     LM G C LK   D  + LF  +G +  K DV T+ V I G   
Sbjct: 279 DEMVNRGYEPNIVTCTALMGGYC-LKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCK 337

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G +  A+ +F +M + G+ P+++TY+++I  L K   +S    + K M R+G+ PDI  
Sbjct: 338 VGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVT 397

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             +LL+ L K   LD A+ LF QL + GL PD+ +Y  +I G C+
Sbjct: 398 CCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCT 442



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 22/279 (7%)

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +  +G V  +   + ++L  G+  + ++ + ++KGLC  G +++A     +++      +
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
            ++Y  LI+G C++G++ +  +L        L+          +G       FF +    
Sbjct: 142 EVSYGILINGLCENGRVNEAVNL--------LRMIEKEKEKEKDG-------FFVKG--- 183

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
               N+ +++ ++D  CR     +  + +  M    + P+  T+  LIRG+   G     
Sbjct: 184 ----NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEG 239

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             L  +M++RGL   V  ++ +I GL K   +     MF  M   G  P+I     L+  
Sbjct: 240 FGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGG 299

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              + N+D A +LF  + + G + D+ TYN  I GYC +
Sbjct: 300 YCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKV 338


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/605 (25%), Positives = 282/605 (46%), Gaps = 55/605 (9%)

Query: 54  FFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTY--------NFFRLFR 105
           FF W+ + +S+P       +L          H  D M+ +  +T         +  R +R
Sbjct: 106 FFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYR 165

Query: 106 DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ 165
           +  G     +   I+ +  +G ++E+  +F      G + +      LM  L+ +N +G 
Sbjct: 166 EFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGL 225

Query: 166 YYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
           ++K+  +M           Y  ++    + G +     M    +++   PN+ T N  + 
Sbjct: 226 FWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG-KMVLSEMEKECKPNLFTYNAFIG 284

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  G +  A  +  +++  G  P+  T++ L++ FCK+ + ++A  ++  M    L P
Sbjct: 285 GLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNP 344

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +   Y+ LIDG  K G ++E   +    + RGLKL+VV +++++      G++ +A+  +
Sbjct: 345 NRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLF 404

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + ML  G  P+  +Y++LI G  +   + +AC L  ++  R+L PS  TYS LI G C S
Sbjct: 405 NEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHS 464

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIF 456
             L+    + D MI+ G+KP+  +   LI   + +     A+      +   ++P+LF +
Sbjct: 465 SDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCY 524

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT-------------------------- 490
           N L+ G CR K+  +   L + MG   IKP+  T                          
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS 584

Query: 491 ---------HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
                    +T+LI+G    G+   A+  F  ML++GL PD+  YSAIIH L K      
Sbjct: 585 SGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKE 644

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII- 600
            + +F    + GV PD+ +YN L++   KE +++ A +L+ ++   G+ P+I+ YNT+I 
Sbjct: 645 AMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIN 704

Query: 601 -CGYC 604
             GYC
Sbjct: 705 DYGYC 709



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 261/554 (47%), Gaps = 55/554 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ +++ G I+E++ I   M   G+ L+      ++  +  +  + +   L   M 
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++G L+   +  A  +  ++  R   P+  T + ++  LC +  + 
Sbjct: 409 MAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ + D ++  G KPNV  + TLI A+ +E++ E A +L  +M+   ++PDL  Y+ LI
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL +A +++E   LL+   ++G+K +   + + ++ Y   G++  A + +  ML+ G +
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN + Y+ILIKG C  G  VEA   F  +L + L P +  YS++I    K+GK ++   +
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 411 YDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMD--GC 463
           +   +K G+ PD  + + LI+G    GD   A + + + +   + PN+ ++NTL++  G 
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGY 708

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ---------- 513
           C+    T+  KLF  M    I PD   + +LI G   +G+L  A+ LF +          
Sbjct: 709 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS 768

Query: 514 ------------------------MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
                                   M+ + LTP+++TY+ +I    K + +     +F  M
Sbjct: 769 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM 828

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS---- 605
           E   + P+   Y  LL    +  N    + LF  +  RG+  D I Y  +   YC     
Sbjct: 829 ETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKS 888

Query: 606 ------LNSCLIDG 613
                 LN  L++G
Sbjct: 889 LEALKLLNKSLVEG 902



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 251/501 (50%), Gaps = 12/501 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y++   + ++ E+ A M    +  SP     L+S L  S+ + +  ++   M 
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMH----RQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G     F+   L++  V E+ + M     + +I  G +P++   N ++  LC   ++ 
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   +   G KPN  T+   IN + K  +++ A + +  M+   +VP+ +IY+ILI
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G    G   E        L++GL  D+  +S+++ +    G    A+  + + L  G +
Sbjct: 599 KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV 658

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID--GFCKSGKLRDGF 408
           P+V  Y+ LI G C++G + +A  L+ ++L   + P+++ Y++LI+  G+CKSG L + F
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAF 718

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D MI +G+ PD  +  +LI+G      +  AL  F ++ + + + +L  FN+L+D  
Sbjct: 719 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSF 777

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +  +  +LF  M    + P+++T+T+LI        +  A  LF  M  R + P+ 
Sbjct: 778 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT 837

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY++++    +  N    + +FK ME  G+A D   Y V+ +   KE     ALKL  +
Sbjct: 838 LTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 897

Query: 584 LTDRGLEPDIITYNTIICGYC 604
               G++ +   ++ +I   C
Sbjct: 898 SLVEGIKLEDDVFDALIFHLC 918



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 230/504 (45%), Gaps = 20/504 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI        + ++ E+   M   G+  +  +   L+   V  +      +L + M 
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513

Query: 175 GKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             G     FC Y  L+ GL R   +E A  +   + ++G  PN  T    +     +G+I
Sbjct: 514 ANGVLPDLFC-YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A   F  +L  G  PN V ++ LI   C      +A   +  M+E  L+PD+  YS +
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I  L K G+ KE   + L  L  G+  DV +++S++  +   GD+ +A Q YD ML+ G 
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692

Query: 350 LPNVISYSILIK--GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
            PN++ Y+ LI   G C+ G L EA  LF +++ + + P    Y  LIDG  K G L   
Sbjct: 693 NPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 752

Query: 408 FSLYDNMIKRGLKP----DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            SL+    ++ +      ++++ S   +G + +A   F   V   L PN+  +  L+D  
Sbjct: 753 LSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAY 812

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            + +   +  +LF+ M   NI P+ +T+T L+      G+    I LF  M  RG+  D 
Sbjct: 813 GKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDA 872

Query: 524 ITYSAIIHGLFK-GKNISVGLHMFKLMERN---GVAPDIAIYNVLLNMLIKECNLDAALK 579
           I Y  +     K GK+    L   KL+ ++   G+  +  +++ L+  L KE  +   L+
Sbjct: 873 IAYGVMASAYCKEGKS----LEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLE 928

Query: 580 LFGQLTDRGLEPDIITYNTIICGY 603
           L  ++    L     T NT++ G+
Sbjct: 929 LLSEMGKEELSLSSKTCNTLLLGF 952



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 210/444 (47%), Gaps = 12/444 (2%)

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           R   G    V++  ++     G +  A  +    I  GF P ++ CN +++ L     +G
Sbjct: 165 REFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMG 224

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               ++  ++     P+V T++ +I A CK   + K   + +  ME +  P+L  Y+  I
Sbjct: 225 LFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLS-EMEKECKPNLFTYNAFI 283

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL + G + E  E+    +++GL  D   ++ ++D +        A   ++ M + G  
Sbjct: 284 GGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLN 343

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN  +Y+ LI G  ++G + EA  +  +++ R L+ +++TY+++I G  K+G++    SL
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++ M+  G++PD    +LLI+G      M  A     +     L P+ F ++ L+ G C 
Sbjct: 404 FNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCH 463

Query: 466 ---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
              L++A + +   +  G   +KP+V  +  LI+    +     AI L   M+  G+ PD
Sbjct: 464 SSDLQKANEVLDQMIRNG---VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           +  Y+ +I GL + K +     +   M   G+ P+   Y   +N+  K   +  A + F 
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580

Query: 583 QLTDRGLEPDIITYNTIICGYCSL 606
            +   G+ P+ + Y  +I G+C +
Sbjct: 581 DMLSSGIVPNNVIYTILIKGHCDV 604



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/389 (22%), Positives = 168/389 (43%), Gaps = 83/389 (21%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS--------NSVGQY 166
           Y+ LI+ +  +G   E++  F  M + G  L PD+  R  S ++ S         ++G +
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKG--LIPDI--RAYSAIIHSLSKNGKTKEAMGVF 649

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL--C 224
            K  +        +Y  L++G  ++G IE A  ++ +++  G  PNIV  N ++     C
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYC 709

Query: 225 INGQIGNASSLFDVLLLVGPKPN----------------------------------VVT 250
            +G +  A  LFD ++  G  P+                                  +  
Sbjct: 710 KSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA 769

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           F++LI++FCK  K+ +A +L++ M++  L P+++ Y+ILID   KA  ++E  +L L   
Sbjct: 770 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDME 829

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
            R +  + + ++S++ +Y  IG+  + +  +  M   G   + I+Y ++    C++G+ +
Sbjct: 830 TRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSL 889

Query: 371 EACGLFGQVLIR--RLEPSLL---------------------------------TYSSLI 395
           EA  L  + L+   +LE  +                                  T ++L+
Sbjct: 890 EALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 949

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
            GF KSG   +   +   M + G  P ++
Sbjct: 950 LGFYKSGNEDEASKVLGVMQRLGWVPTSL 978



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 38/259 (14%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F    + S+G     ++ LI+++ + GK+ E+ E+F  M D    L+P++V         
Sbjct: 756 FHEAQQKSVGSLSA-FNSLIDSFCKHGKVIEARELFDDMVDKK--LTPNIV--------- 803

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
                                Y  L++   +  ++E A  +   +  R  +PN +T   +
Sbjct: 804 --------------------TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 843

Query: 220 LKRLCINGQIGNA---SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           L  L  N QIGN     SLF  +   G   + + +  + +A+CKE K  +A +L N  + 
Sbjct: 844 L--LSYN-QIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 900

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             +  +  ++  LI  L K  ++    ELL       L L     ++++  +   G+   
Sbjct: 901 EGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDE 960

Query: 337 AVQTYDRMLNGGFLPNVIS 355
           A +    M   G++P  +S
Sbjct: 961 ASKVLGVMQRLGWVPTSLS 979


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 242/471 (51%), Gaps = 15/471 (3%)

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L+S L       Q + L   MR  G     C    L+N L     +   F     +++R
Sbjct: 74  HLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRR 133

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G+ PNIVT N ++K LC+  +I  A+ LF  +  +G  P+VVT+ TLI   C    +  A
Sbjct: 134 GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIA 193

Query: 268 FQLYNLMM------EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            +L+  M+      E++  P++I Y+I++DGL K GR  E  +L      +G+   ++ +
Sbjct: 194 LKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISY 253

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +S++  +   G    + +  D ML+ G  P+++++++LI  LC++G+++EA  L G ++ 
Sbjct: 254 NSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIE 313

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
             + P L+TY+SLI+GFC  G L     L+ +M  +G +PD +  ++LING      + +
Sbjct: 314 SGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEE 373

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A++ + + + +   PN+  +++L+ G     +  D  KLF +M  + I  +  T+ + + 
Sbjct: 374 AMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLD 433

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+     L  A+ LF ++       ++   + +I GL K   +     +F+ +   G  P
Sbjct: 434 GLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEP 493

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           ++  Y ++++   +E  +D A  L  ++   G  PDIITYNT++ G+   N
Sbjct: 494 NVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESN 544



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 276/557 (49%), Gaps = 31/557 (5%)

Query: 44  KTNN--PTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFF 101
           KT N   T A+ FF        +P+++   H+L         S VF          YN  
Sbjct: 44  KTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFS--------LYNQM 95

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVD 159
           RL    L    C  + L+     + ++ E    FA +   G   SP++V    L+  L  
Sbjct: 96  RL--SGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRG--YSPNIVTYNTLIKGLCM 151

Query: 160 SNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQV---IQRGFV-- 210
            + + +  +L   M+  G       Y  L+ GL   G I  A  +H+++   I R  +  
Sbjct: 152 EHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINC 211

Query: 211 -PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PN++T N I+  LC  G+   A  LF+ +   G  P+++++++LI+ FC   K E++ +
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKR 271

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L + M++  L PD++ +++LID L K G++ E  +LL   ++ G+  D+V ++S+++ + 
Sbjct: 272 LLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 331

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            +GD+  A + +  M + G  P+VISY++LI G  +  ++ EA  L+ ++L+    P+++
Sbjct: 332 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 391

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           TY SL+ G   +GK+ D   L+  M   G+  ++    + ++GL     + +A++ F + 
Sbjct: 392 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 451

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
                   +   N L+DG C+  +     +LF  +     +P+V+T+T++I G   +G +
Sbjct: 452 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 511

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A +L  +M   G TPD+ITY+ ++ G ++   +   + +   M +  V+PD    +++
Sbjct: 512 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 571

Query: 565 LNMLIKECNLDAALKLF 581
           ++ML K+      L L 
Sbjct: 572 VDMLSKDEKYQECLHLL 588



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 225/455 (49%), Gaps = 46/455 (10%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           +A H    +++    P++ + N +L  L          SL++ + L G   +  T + L+
Sbjct: 52  HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N  C   +L + F  +  ++     P+++ Y+ LI GL    R+ E   L L     G  
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCT 171

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG------GFLPNVISYSILIKGLCQQGRL 369
            DVV + +++    G G++  A++ +  MLN          PNVI+Y+I++ GLC+ GR 
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  LF ++  + + PS+++Y+SLI GFC +GK  +   L D M+ +GL+PD V  ++L
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291

Query: 430 IN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I+     G + +A +     +   ++P+L  +N+L++G C +       +LF+ M     
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           +PDVI++ VLI G +    +  A+ L+ +ML  G  P+VITY +++ G+F    +     
Sbjct: 352 EPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 411

Query: 545 MFKLMERNGVAPDIAIY-----------------------------------NVLLNMLI 569
           +F +M+ +G+A +   Y                                   N L++ L 
Sbjct: 412 LFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLC 471

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           K   L+ A +LF +L++ G EP+++TY  +I G+C
Sbjct: 472 KAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 506



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 190/389 (48%), Gaps = 38/389 (9%)

Query: 222 RLCINGQIGNASSL--FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           R C  G +    +L  F +++   P P++ +F+ L++   K     + F LYN M    L
Sbjct: 41  RHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGL 100

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
             D    +IL++ L    RL+EG       L RG   ++V +++++        +  A +
Sbjct: 101 SSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATR 160

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL--IRRLE----PSLLTYSS 393
            + RM   G  P+V++Y  LIKGLC  G +  A  L  ++L  I R E    P+++TY+ 
Sbjct: 161 LFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNI 220

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNL 453
           ++DG CK G+  +   L++ M  +G+                              IP++
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQGM------------------------------IPSI 250

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +N+L+ G C   +  ++ +L   M    ++PD++T  VLI  +  +G +  A  L   
Sbjct: 251 ISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGV 310

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M++ G+ PD++TY+++I G     +++    +F  M   G  PD+  YNVL+N   K   
Sbjct: 311 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 370

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICG 602
           ++ A+KL+ ++   G  P++ITY++++ G
Sbjct: 371 VEEAMKLYNEMLLVGKRPNVITYDSLLKG 399



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 139/313 (44%), Gaps = 49/313 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLV-DSNSVGQYYKL 169
           ++ LI+   + GK+ E+ ++   M + GI   PDLV    L+   C+V D NS  + +  
Sbjct: 288 FNVLIDTLCKEGKVIEAKKLLGVMIESGIV--PDLVTYNSLIEGFCMVGDLNSARELF-- 343

Query: 170 CRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
             +M  KG       Y  L+NG  +   +E A  ++ +++  G  PN++T + +LK + +
Sbjct: 344 -VSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL 402

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTF---------------------------------- 251
            G++ +A  LF V+   G   N  T+                                  
Sbjct: 403 AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIEN 462

Query: 252 -STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
            + LI+  CK  KLE A++L+  +      P+++ Y+I+I G  + G++ + N L+    
Sbjct: 463 LNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKME 522

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
             G   D++ ++++M  +     +   VQ   RM      P+ I+ SI++  L +  +  
Sbjct: 523 ANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQ 582

Query: 371 EACGLFGQVLIRR 383
           E   L  +  I++
Sbjct: 583 ECLHLLPRFPIQK 595



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 64/136 (47%)

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
           AT  +  F LM      P + +   L+ G+A     S    L+ QM   GL+ D  T + 
Sbjct: 50  ATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +++ L     +  G   F  + R G +P+I  YN L+  L  E  +  A +LF ++   G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 589 LEPDIITYNTIICGYC 604
             PD++TY T+I G C
Sbjct: 170 CTPDVVTYGTLIKGLC 185


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 254/526 (48%), Gaps = 35/526 (6%)

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
           F  +++F R  R   G    DY  ++   +   ++D+++ +F  M+    + S     +L
Sbjct: 26  FPLSFSFCRR-RAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKL 84

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +S +   N           M   G       Y  L+N   R   +  A  +  ++++ G+
Sbjct: 85  LSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGY 144

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P+IVT N +L   C   +I +A +L D ++ +G KP+ VTF+TLI+      K  +A  
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L + M++    PDL+ Y  +++GL K G       LL       ++ +VV++S+V+D+  
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
                  A+  +  M N G  PNVI+YS LI  LC  GR  +A  L   ++ R++ P+L+
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL 449
           T+S+LID F K GKL     LY+ MIKR + P                            
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP---------------------------- 356

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
             N+F +++L++G C L R  +  ++  LM   +  P+V+T+  LI G      +   + 
Sbjct: 357 --NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF +M +RGL  + +TY+ +IHG F+ ++      +FK M   GV P+I  YN+LL+ L 
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
           K   L  A+ +F  L    +EPDI TYN +I G C      + G +
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIY 520



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 238/490 (48%), Gaps = 39/490 (7%)

Query: 24  KTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVA 83
           +T +SD++ + A  +   ++  + P P+I  F            ++L+  + + +  D+ 
Sbjct: 51  RTGLSDIELDDAIGLFG-VMAQSRPFPSIIEF------------SKLLSAIAKMNKFDLV 97

Query: 84  SHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGI 143
               +KM I  G ++N +             Y+ LI  + R  ++  ++ +   M  +G 
Sbjct: 98  ISFGEKMEI-LGISHNLY------------TYNILINCFCRCSRLSLALALLGKMMKLG- 143

Query: 144 YLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENA 197
              PD+V    L++     N +     L   M   G+      +  L++GL        A
Sbjct: 144 -YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
             +  +++QRG  P++VT   ++  LC  G    A +L + +     + NVV +ST+I++
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
            CK    + A  L+  M    + P++I YS LI  L   GR  + + LL   ++R +  +
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           +V FS+++DA+V  G + +A + Y+ M+     PN+ +YS LI G C   RL EA  +  
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--- 434
            ++ +   P+++TY++LI+GFCK+ ++  G  L+  M +RGL  + V  + LI+G     
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442

Query: 435 --GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
              +A   F Q V + + PN+  +N L+DG C+  +    + +F  +    ++PD+ T+ 
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502

Query: 493 VLIRGIASQG 502
           ++I G+   G
Sbjct: 503 IMIEGMCKAG 512


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 225/431 (52%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  +++   R G  E A  +   ++ +G  P IVT N +LK LC +G    A  +F  +
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+V +F+ LI  FC+  ++E+A ++Y  M    + PDL+ +S LI    + G++
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                 L      GL  D V+++ V+  +   G +  A++  D M+  G LP+V++Y+ L
Sbjct: 252 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 311

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GLC++ RL++A GL  ++  R + P L T+++LI G+C  GKL     L+D M+ + L
Sbjct: 312 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD V  + LI+G+   GD   A   +       + PN   ++ L+D  C   +  D   
Sbjct: 372 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 431

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
               M    I P+++T+  +I+G    G++S       +M+   ++PD+ITY+ +IHG  
Sbjct: 432 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 491

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +     +  +ME+  V PD+  YN+L+N      N+  A  +F ++  +G+EPD  
Sbjct: 492 KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 551

Query: 595 TYNTIICGYCS 605
           TY ++I G+ +
Sbjct: 552 TYMSMINGHVT 562



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 222/438 (50%), Gaps = 51/438 (11%)

Query: 94  FGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           + K +  F+     + DFG       ++ LI  + R+G+I+E+++I+  M   GI   PD
Sbjct: 181 WDKAWEVFK----EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGI--KPD 234

Query: 149 LVQRLMSCLVD----SNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHM 200
           LV    SCL+        +       R MR  G      +Y  ++ G  R G++ +A  +
Sbjct: 235 LVS--FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRV 292

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             +++  G +P++VT N +L  LC   ++ +A  L + +   G  P++ TF+TLI+ +C 
Sbjct: 293 RDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCI 352

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
           E KL+KA QL++ M+   L PD++ Y+ LIDG+ + G L + N+L      R +  + V 
Sbjct: 353 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 412

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           +S ++D++   G V  A    D M+N G LPN+++Y+ +IKG C+ G + +      +++
Sbjct: 413 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 472

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRF 440
           + ++ P L+TY++LI G+ K  K+ D F L + M K  ++PD V  ++LING        
Sbjct: 473 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF------- 525

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
              SV   +    +IF  +   C +                  I+PD  T+  +I G  +
Sbjct: 526 ---SVHGNVQEAGWIFEKM---CAK-----------------GIEPDRYTYMSMINGHVT 562

Query: 501 QGSLSSAILLFFQMLKRG 518
            G+   A  L  +ML+RG
Sbjct: 563 AGNSKEAFQLHDEMLQRG 580



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 206/378 (54%), Gaps = 5/378 (1%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A+  + ++     + N  T + +++ +CK  + +K   + + M +  + PD++ +++++D
Sbjct: 79  AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 138

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
             F+AG  +    L+ + + +GLK  +V ++SV+      G   +A + +  M + G  P
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V S++ILI G C+ G + EA  ++ ++  R ++P L+++S LI  F + GK+    +  
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 258

Query: 412 DNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M   GL PD V+ +++I G     LM DALR   + V    +P++  +NTL++G C+ 
Sbjct: 259 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 318

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           +R  D   L   M    + PD+ T T LI G   +G L  A+ LF  ML + L PD++TY
Sbjct: 319 RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 378

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I G+ +  ++     ++  M    + P+   Y++L++   ++  ++ A     ++ +
Sbjct: 379 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 438

Query: 587 RGLEPDIITYNTIICGYC 604
           +G+ P+I+TYN+II GYC
Sbjct: 439 KGILPNIMTYNSIIKGYC 456



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 157/330 (47%), Gaps = 5/330 (1%)

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            P   ++ +LI    ++ + +E  E     LD  + +     ++++ A    G    A  
Sbjct: 22  TPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 81

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            Y  + +     N  + +I++   C+     +   +  ++  R + P ++T++ ++D   
Sbjct: 82  AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 141

Query: 400 KSGKLRDGFSLYDNMIKRGLKP-----DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           ++G      +L D+M+ +GLKP     ++V+  L  +G+   A   F +     + P++ 
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            F  L+ G CR+    + +K++  M    IKPD+++ + LI   A +G +  A+    +M
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
              GL PD + Y+ +I G  +   +S  L +   M   G  PD+  YN LLN L KE  L
Sbjct: 262 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             A  L  ++ +RG+ PD+ T+ T+I GYC
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYC 351


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/596 (26%), Positives = 287/596 (48%), Gaps = 66/596 (11%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           ++++  ++   +P  A++FF    N     NI   + +IHVL+ S +   A ++ + +V 
Sbjct: 31  DSLITTVLNCRSPWKALEFF----NAAPEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQ 86

Query: 93  QFGKTYN--------FFRLFRDSLGDFGCD-YSFLIENYVRIGKIDESVEIFAYMSDMGI 143
              K++         F  L R     F  + Y  LI    ++  ++E++ ++     +G 
Sbjct: 87  NLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMY---HKVGA 143

Query: 144 YLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFH 199
            L+      L+  LV +      +++   M   G       +  L++G  R+G +  A  
Sbjct: 144 ALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQE 203

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           M  ++  +G VP ++    +++ LC + +I  A S+   +  VG  PNV T++TL++ +C
Sbjct: 204 MFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYC 263

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K A  ++A +LY  M+   LVPD++ + ILIDGL K G +K    L +  +   +  ++ 
Sbjct: 264 KLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIA 323

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           V++S++DAY  +GDV  A+  +  +      P+V +YSILI+GLC   R  EA  +F ++
Sbjct: 324 VYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKM 383

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR 439
               +  + +TY+SLIDG CK GK+     +   M + G++P                  
Sbjct: 384 TKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEP------------------ 425

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                       N+  F+TL+DG C+++     + ++  M + ++ PDV+T+T +I G  
Sbjct: 426 ------------NVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHC 473

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL----------M 549
             GS+  A+ L+  ML  G+TP+  T S ++ GL K   IS  L +F            +
Sbjct: 474 KYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNV 533

Query: 550 ERNGVAPDIA---IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +  G  P +     Y  L++ L ++     A+KLF  +   GL+PD + Y  ++ G
Sbjct: 534 DAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRG 589



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 255/496 (51%), Gaps = 29/496 (5%)

Query: 144 YLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--VYEFLMNGLLRKGVIENAFHMH 201
           YL  DLVQ L+      ++    +     ++   F   VY  L+  L +  ++E A  M+
Sbjct: 79  YLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMY 138

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            +V   G    I  CN +L  L   G+      +++ ++  G  P+V+TF TLI+  C++
Sbjct: 139 HKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQ 195

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
             L +A ++++ M    +VP +I+Y+ILI GL    +++E   +     + G+  +V  +
Sbjct: 196 GDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTY 255

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +++MD Y  + +  +A++ Y  ML  G +P+V+++ ILI GLC+ G +  A  LF  ++ 
Sbjct: 256 NTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIK 315

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----D 436
             + P++  Y+SLID +CK G + +  +L+  + +  + PD    S+LI GL       +
Sbjct: 316 FSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEE 375

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A   F +  +  ++ N   +N+L+DGCC+  +    +++   M    ++P+VIT + LI 
Sbjct: 376 AGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLID 435

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G     +L +A+ ++ +M+ + L+PDV+TY+A+I G  K  ++   L ++  M  NG+ P
Sbjct: 436 GYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITP 495

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQ----LTDR------GLEPDI---ITYNTIICGY 603
           +    + LL+ L K+  +  AL+LF +     T R      G +P +   + Y  +I G 
Sbjct: 496 NCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGL 555

Query: 604 CSLNSCLIDGYFKSQI 619
           C       DG F   +
Sbjct: 556 CQ------DGQFSKAV 565


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 278/606 (45%), Gaps = 67/606 (11%)

Query: 7   NLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPN 66
           NL T    I  C C+       DL F    A L N+IK      AI F         +P 
Sbjct: 90  NLCTYGILIGSCCCAGRL----DLGF----AALGNVIKKGFRVDAIAF---------TPL 132

Query: 67  IAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIG 126
           +  L      SD  D+   V  +M  Q G   N F             Y+ L++      
Sbjct: 133 LKGLCADKRTSDAMDI---VLRRMT-QLGCIPNVF------------SYNILLKGLCDEN 176

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMN 186
           +  E++E+   M D G    PD+V                              Y  ++N
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVS-----------------------------YTTVIN 207

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           G  ++G ++ A+  + +++ RG +PN+VT N I+  LC    +  A  +   ++  G  P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           N  T++++++ +C   + ++A      M    + PD++ Y+ L+D L K GR  E  ++ 
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
            +   RGLK ++  + +++  Y   G +       D M+  G  PN   +SILI    +Q
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G++ +A  +F ++  + L P  +TY ++I   CKSG++ D    ++ MI   L P  +V 
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + LI+ L        A     + +   +  +   FN+++D  C+  R  ++ KLF LM  
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             +KP++IT++ LI G    G +  A  L   M+  G+ PD +TY+ +I+G  K   +  
Sbjct: 508 IGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L +F+ ME +GV+PDI  YN++L  L +     AA +L+  +T+ G + ++ TYN I+ 
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 602 GYCSLN 607
           G C  N
Sbjct: 628 GLCKNN 633



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 227/482 (47%), Gaps = 29/482 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y   G+  E++     M   G+   PD+V    LM  L  +    +  K+  +
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGV--EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  PN    + ++      G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  P+ VT+ T+I   CK  ++E A + +  M++  L P  I+Y+ 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L    +  +  EL+L  LDRG+ LD + F+S++D++   G V  + + +D M+  G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN+I+YS LI G C  G++ EA  L   ++   ++P  +TY++LI+G+CK  ++ D  
Sbjct: 510 VKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI------------- 455
            L+  M   G+ PD +  ++++ GL        FQ+ R      L++             
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGL--------FQTRRTAAAKELYVGITESGTQLELST 621

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G C+     + +++F  + + +++ +  T  ++I  +   G    A  LF  + 
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             GL PDV TYS +   L +   +     +F  ME NG   +  + N ++  L++  ++ 
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741

Query: 576 AA 577
            A
Sbjct: 742 RA 743



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 190/383 (49%), Gaps = 16/383 (4%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---DLVPDLIIYS 287
           +A  +FD LL  G   ++   +  +    + +    A   YN M      ++ P+L  Y 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLN 346
           ILI     AGRL  G   L   + +G ++D + F+ ++           A+     RM  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR---RLEPSLLTYSSLIDGFCKSGK 403
            G +PNV SY+IL+KGLC + R  EA  L  Q++        P +++Y+++I+GF K G 
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           L   +  Y  M+ RG+ P+ V  + +I  L     M  A+      V+  ++PN   +N+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C   +  + +     M    ++PDV+T+  L+  +   G  + A  +F  M KRG
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           L P++ TY  ++ G +  K   V +H +  LM RNG+ P+  ++++L+    K+  +D A
Sbjct: 335 LKPEITTYGTLLQG-YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 578 LKLFGQLTDRGLEPDIITYNTII 600
           + +F ++  +GL PD +TY T+I
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVI 416



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 8/235 (3%)

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            + P+L TY  LI   C +G+L  GF+   N+IK+G + DA+  + L+ GL  D      
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 443 QSV---RMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVITHTVL 494
             +   RMT    IPN+F +N L+ G C   R+ + ++L  +M     +  PDV+++T +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G   +G L  A   + +ML RG+ P+V+TY++II  L K + +   + +   M +NGV
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            P+   YN +++          A+    ++   G+EPD++TYN+++   C    C
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC 320



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 134/321 (41%), Gaps = 74/321 (23%)

Query: 330 GIGDVGR-----AVQTYDRMLNGG---FLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
            + DV R     AV  Y+RM   G     PN+ +Y ILI   C  GRL       G V+ 
Sbjct: 60  ALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIK 119

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           +      + ++ L+ G C   +  D   +                           LR  
Sbjct: 120 KGFRVDAIAFTPLLKGLCADKRTSDAMDI--------------------------VLRRM 153

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVITHTVLIRGIA 499
            Q   +  IPN+F +N L+ G C   R+ + ++L  +M     +  PDV+++T +I G  
Sbjct: 154 TQ---LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM-------------- 545
            +G L  A   + +ML RG+ P+V+TY++II  L K + +   + +              
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 546 ---------------------FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
                                 K M  +GV PD+  YN L++ L K      A K+F  +
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 585 TDRGLEPDIITYNTIICGYCS 605
           T RGL+P+I TY T++ GY +
Sbjct: 331 TKRGLKPEITTYGTLLQGYAT 351


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 261/517 (50%), Gaps = 31/517 (5%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN----SVGQYYKL 169
           D+  L+   VR+G++D  + +   M    +  +      LM C    +    ++  + K+
Sbjct: 80  DFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKI 139

Query: 170 CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            +         +  L++GL  +  I  A  +  Q+ +    PN+VT   ++  LC  G++
Sbjct: 140 TKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRV 195

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV-PDLIIYSI 288
             A +L D +L  G +PN +T+ T+++  CK      A  L   M E+  + P+++I+ +
Sbjct: 196 VEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPL 255

Query: 289 -----LIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
                +I+G   +GR  E  +LL   L+R  +  DVV ++++++A+V  G    A + YD
Sbjct: 256 ERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYD 315

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            ML  G +P+ I+YS +I G C+Q RL  A  +F  +  +   P ++T+++LI G+C++ 
Sbjct: 316 EMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAK 375

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFN 457
           ++ DG  L   M + GL  + +  + LI+G   +GD   A     + V   + PN+   N
Sbjct: 376 RVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCN 435

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYN-----------IKPDVITHTVLIRGIASQGSLSS 506
           TL+DG C   +  D +++F  M               ++PDV T+ +LI G+ ++G    
Sbjct: 436 TLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLE 495

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L+ +M  RG+ PD ITY+++IHGL K   +     MF  M     +P++  +  L+N
Sbjct: 496 AEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 555

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              K   +D  L+LF ++  RG+  + ITY T+I G+
Sbjct: 556 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGF 592



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 242/518 (46%), Gaps = 61/518 (11%)

Query: 115 YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           YSF  L++ +    K+  ++  F  ++ +G + +      L+  L   + + +   L   
Sbjct: 114 YSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQ 173

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           M       +  LMNGL R+G +  A  +  ++++ G  PN +T   I+  +C  G   +A
Sbjct: 174 MCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSA 233

Query: 233 SSLFDVL---------LLVGP---------------------------------KPNVVT 250
            +L   +         +++ P                                  P+VVT
Sbjct: 234 LNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVT 293

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           ++ LINAF KE K  +A +LY+ M+   ++P  I YS +IDG  K  RL     +     
Sbjct: 294 YNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMA 353

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
            +G   D++ F++++  Y     V   ++    M   G + N I+Y+ LI G CQ G L 
Sbjct: 354 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLN 413

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK-----------RGL 419
            A  L  +++   + P+++T ++L+DG C +GKL+D   ++  M K            G+
Sbjct: 414 AAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGV 473

Query: 420 KPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD    ++LI+GL+      +A   + +     ++P+   +N+++ G C+  R  +  +
Sbjct: 474 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQ 533

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  MG  +  P+V+T T LI G    G +   + LF +M +RG+  + ITY  +IHG  
Sbjct: 534 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFR 593

Query: 535 KGKNISVGLHMFKLMERNGVAPD-IAIYNVLLNMLIKE 571
           K  NI+  L +F+ M  +GV PD I I N+L  +  KE
Sbjct: 594 KVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKE 631



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 200/381 (52%), Gaps = 17/381 (4%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
           ++NG    G    A  + +++++R  + P++VT N ++      G+   A  L+D +L  
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P+ +T+S++I+ FCK+ +L+ A  ++ LM      PD+I ++ LI G  +A R+ +G
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            +LL    + GL  + + +++++  +  +GD+  A      M++ G  PNV++ + L+ G
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440

Query: 363 LCQQGRLVEACGLFGQVLIRRL-----------EPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           LC  G+L +A  +F  +   ++           EP + TY+ LI G    GK  +   LY
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + M  RG+ PD +  + +I+GL     + +A + F      +  PN+  F TL++G C+ 
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  D ++LF  MG   I  + IT+  LI G    G+++ A+ +F +M+  G+ PD IT 
Sbjct: 561 GRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITI 620

Query: 527 SAIIHGLFKGKNISVGLHMFK 547
             ++ GL+  + +   + M +
Sbjct: 621 RNMLTGLWSKEELKRAVAMLE 641



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 191/365 (52%), Gaps = 16/365 (4%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L + F +   LE A  L+  M+    +P +I +  L+  + + GRL     L      R 
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  +   F+ +M  +     +  A+ T+ ++   GF P V+++S L+ GLC + R+ EA 
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            LF Q+     +P+++T+++L++G C+ G++ +  +L D M++ GL+P+ +    +++G+
Sbjct: 169 DLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 434 --MGD---ALRFFFQSVRMTLI-PNLFIF-----NTLMDGCCRLKRATDTVKLFM-LMGM 481
             MGD   AL    +   ++ I PN+ I+       +++G C   R ++  +L   ++  
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLER 284

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             I PDV+T+  LI     +G    A  L+ +ML RG+ P  ITYS++I G  K   +  
Sbjct: 285 KKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDA 344

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
             HMF LM   G +PDI  +N L+    +   +D  +KL  ++T+ GL  + ITY T+I 
Sbjct: 345 AEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 404

Query: 602 GYCSL 606
           G+C +
Sbjct: 405 GFCQV 409



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 153/317 (48%), Gaps = 19/317 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS +I+ + +  ++D +  +F  M+  G   SPD++    L++    +  V    KL   
Sbjct: 329 YSSMIDGFCKQNRLDAAEHMFYLMATKGC--SPDIITFNTLIAGYCRAKRVDDGIKLLHE 386

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  L++G  + G +  A  + ++++  G  PN+VTCN +L  LC NG+
Sbjct: 387 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGK 446

Query: 229 IGNASSLFDVLL-----------LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           + +A  +F  +              G +P+V T++ LI+    E K  +A +LY  M   
Sbjct: 447 LKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 506

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            +VPD I Y+ +I GL K  RL E  ++  +   +    +VV F+++++ Y   G V   
Sbjct: 507 GIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 566

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++ +  M   G + N I+Y  LI G  + G +  A  +F +++   + P  +T  +++ G
Sbjct: 567 LELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTG 626

Query: 398 FCKSGKLRDGFSLYDNM 414
                +L+   ++ +++
Sbjct: 627 LWSKEELKRAVAMLEDL 643



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 142/283 (50%), Gaps = 16/283 (5%)

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+  +  M+    LP+VI +  L+  + + GRL     L  ++ +RR+  +  +++ L+ 
Sbjct: 62  AIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMK 121

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
            FC   KL    S +  + K G  P  V  S L++GL     + +AL  F Q  +    P
Sbjct: 122 CFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----P 177

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+  F TLM+G CR  R  + V L   M    ++P+ IT+  ++ G+   G   SA+ L 
Sbjct: 178 NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 237

Query: 512 FQMLK-RGLTPDVITY-----SAIIHGLFKGKNISVGLHMFK-LMERNGVAPDIAIYNVL 564
            +M +   + P+V+ +     + +I+G       S    + + ++ER  ++PD+  YN L
Sbjct: 238 RKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNAL 297

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +N  +KE     A +L+ ++  RG+ P  ITY+++I G+C  N
Sbjct: 298 INAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQN 340


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 266/543 (48%), Gaps = 25/543 (4%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSF--LIENYVRIGK 127
           +I VL + +  D A  +F++M               +   +  C Y++  +I  Y   GK
Sbjct: 309 MIGVLCKGNRLDEAVEIFEQM---------------EQNRNVPCAYAYNTMIMGYGSAGK 353

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR---GKGFCVYEFL 184
            DE+  +       G   S      +++CL     +G+  +    M+         Y  L
Sbjct: 354 FDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVL 413

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++ L + G +E AF +   + + G  PN++T N ++ RLC   ++  A S+F+ +     
Sbjct: 414 IDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKIC 473

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
            P+ VTF +LI+   K+ +++ A++LY  M++ D +P+ ++Y+ LI   FK GR ++G++
Sbjct: 474 SPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHK 533

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +    + RG   D+ + ++ MD     G+ G+    ++ + + GF+P+V+SYSILI GL 
Sbjct: 534 IFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLV 593

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + G   E   LF  +  +        Y++ IDGFCKSGK+   + L + M  +G +P  V
Sbjct: 594 KAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVV 653

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
               +I+GL     + +A   F ++    L  N+ I+++L+DG  ++ R  +   +   +
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 713

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               + P+V T   L+  +     ++ A++ F  M     TP+ ITYS +I+GL + +  
Sbjct: 714 MQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKF 773

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +     ++ M++ G+ P+   Y  ++  L K  N+  A  LF +    G  PD  +YN I
Sbjct: 774 NKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAI 833

Query: 600 ICG 602
           I G
Sbjct: 834 IEG 836



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 246/502 (49%), Gaps = 12/502 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+  I+ + + GK+D + + F  +   G+         ++  L   N + +  ++   M 
Sbjct: 271 YNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQME 330

Query: 175 GKGF--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                 C Y +  ++ G    G  + A+ +  +   RG +P+++  N IL  L   G++G
Sbjct: 331 QNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLG 390

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   F+ +      PN+ T++ LI+  CK  ++E AF++ + M E  L P+++  +I+I
Sbjct: 391 EALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMI 449

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L KA +L E   +      +    D V F S++D     G V  A + Y++ML+   +
Sbjct: 450 DRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKI 509

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN + Y+ LIK   + GR  +   +F +++ R   P L   ++ +D   K+G+   G +L
Sbjct: 510 PNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRAL 569

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++ +  RG  PD +  S+LI+GL+      +    F+       + +   +NT +DG C+
Sbjct: 570 FEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCK 629

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +     +L   M     +P V+T+  +I G+A    L  A +LF +    GL  +V+ 
Sbjct: 630 SGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVI 689

Query: 526 YSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           YS++I G  K G+     L M +LM++ G+ P++  +N LL+ L+K   ++ AL  F  +
Sbjct: 690 YSSLIDGFGKVGRIDEAYLIMEELMQK-GLTPNVYTWNCLLDALVKAEEINEALVCFQNM 748

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
            +    P+ ITY+ +I G C +
Sbjct: 749 KNLKGTPNHITYSILINGLCRV 770



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 233/477 (48%), Gaps = 16/477 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   + G+++ + ++   M + G++ +   V  ++  L  +  + +   +   M 
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMN 469

Query: 175 GK-------GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            K        FC    L++GL ++G +++A+ ++ Q++    +PN V    ++K     G
Sbjct: 470 HKICSPDEVTFCS---LIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCG 526

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +  +   +F  ++  G  P++   +  ++   K  +  K   L+  +     +PD++ YS
Sbjct: 527 RKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYS 586

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ILI GL KAG  +E  EL     ++G  LD   +++ +D +   G V +A Q  + M   
Sbjct: 587 ILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTK 646

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P V++Y  +I GL +  RL EA  LF +     LE +++ YSSLIDGF K G++ + 
Sbjct: 647 GRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEA 706

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           + + + ++++GL P+    + L++ L     + +AL  F     +   PN   ++ L++G
Sbjct: 707 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILING 766

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            CR+++       +  M    +KP+ IT+T +I G+A  G+++ A  LF +    G  PD
Sbjct: 767 LCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPD 826

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK-ECNLDAAL 578
             +Y+AII GL   +       +F+     G          LL+ L K EC   AA+
Sbjct: 827 SASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAI 883



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 134/586 (22%), Positives = 253/586 (43%), Gaps = 25/586 (4%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           + + ++  L +  +   AI +F+WT          +    LL    ++V    F++++ +
Sbjct: 94  KTDLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGE 153

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIE---NYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
                        S+  FG      IE   + ++  K+ E  ++   M       +    
Sbjct: 154 M------------SIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAY 201

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR----KGVIENAFHMHRQVIQ 206
             L+  L           L   M+  G+ V   L   ++R    +G ++ A  +  ++  
Sbjct: 202 TTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKS 261

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
                +IV  N  +      G++  A   F  +   G  P+ VT++++I   CK  +L++
Sbjct: 262 NCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDE 321

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A +++  M +   VP    Y+ +I G   AG+  E   LL     RG    V+ ++ ++ 
Sbjct: 322 AVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILT 381

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G +G A++T++ M      PN+ +Y++LI  LC+ G +  A  +   +    L P
Sbjct: 382 CLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFP 440

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           +++T + +ID  CK+ KL +  S+++ M  +   PD V    LI+GL     + DA R +
Sbjct: 441 NVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLY 500

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            Q +    IPN  ++ +L+    +  R  D  K+F  M      PD+      +  +   
Sbjct: 501 EQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKA 560

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G       LF ++  RG  PDV++YS +IHGL K         +F  M+  G   D   Y
Sbjct: 561 GETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAY 620

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           N  ++   K   ++ A +L  ++  +G +P ++TY ++I G   ++
Sbjct: 621 NTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKID 666


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 228/430 (53%), Gaps = 6/430 (1%)

Query: 177 GFCVYEFLMNGLLR-KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           G   Y  +++  +R K  I  A ++ +++++    PN+ T N +++  C  G I  A +L
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL 227

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           FD +   G  PNVVT++TLI+ +CK  K++  F+L   M    L P+LI Y+++I+GL +
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            GR+KE + +L     RG  LD V +++++  Y   G+  +A+  +  ML  G  P+VI+
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI  +C+ G +  A     Q+ +R L P+  TY++L+DGF + G + + + +   M 
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G  P  V  + LING      M DA+          L P++  ++T++ G CR     
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + +++   M    IKPD IT++ LI+G   Q     A  L+ +ML+ GL PD  TY+A+I
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +      ++   L +   M   GV PD+  Y+VL+N L K+     A +L  +L      
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587

Query: 591 PDIITYNTII 600
           P  +TY+T+I
Sbjct: 588 PSDVTYHTLI 597



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 156/599 (26%), Positives = 282/599 (47%), Gaps = 63/599 (10%)

Query: 36  NAILANLIKTN-NPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMV 91
           NA+L   I++  N + A   FK       SPN+     LI     +   DVA  +FDKM 
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 232

Query: 92  IQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLS 146
            +                  GC      Y+ LI+ Y ++ KID+  ++   M+  G  L 
Sbjct: 233 TK------------------GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG--LE 272

Query: 147 PDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFH----M 200
           P+L+    +++ L     + +   +   M  +G+ + E   N L++    E  FH    M
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
           H ++++ G  P+++T   ++  +C  G +  A    D + + G  PN  T++TL++ F +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
           +  + +A+++   M +    P ++ Y+ LI+G    G++++   +L    ++GL  DVV 
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           +S+V+  +    DV  A++    M+  G  P+ I+YS LI+G C+Q R  EAC L+ ++L
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
              L P   TY++LI+ +C  G L     L++ M+++G+ PD V  S+LINGL       
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRL--KRATDTVKLFMLMGMY----------- 482
           +A R   +      +P+   ++TL++ C  +  K     +K F + GM            
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632

Query: 483 --NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI- 539
             N KPD   + ++I G    G +  A  L+ +M+K G     +T  A++  L K   + 
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692

Query: 540 ---SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              SV +H+ +  E +    +     VL+ +  +E N+D  L +  ++   G  P+ I+
Sbjct: 693 ELNSVIVHVLRSCELS----EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 203/449 (45%), Gaps = 45/449 (10%)

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
           S+ + Y LC +       V++ ++    R  +I+ A  +       GF+P +++ N +L 
Sbjct: 122 SLQETYDLCYSTSS----VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 177

Query: 222 RLCINGQ-IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
               + + I  A ++F  +L     PNV T++ LI  FC    ++ A  L++ M     +
Sbjct: 178 ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL 237

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+++ Y+ LIDG  K           L  +D G KL                        
Sbjct: 238 PNVVTYNTLIDGYCK-----------LRKIDDGFKL------------------------ 262

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
              M   G  PN+ISY+++I GLC++GR+ E   +  ++  R      +TY++LI G+CK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFI 455
            G       ++  M++ GL P  +  + LI+     G M  A+ F  Q     L PN   
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           + TL+DG  +     +  ++   M      P V+T+  LI G    G +  AI +   M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           ++GL+PDV++YS ++ G  +  ++   L + + M   G+ PD   Y+ L+    ++    
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            A  L+ ++   GL PD  TY  +I  YC
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYC 531



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 3/101 (2%)

Query: 517 RGLTPDVITYSAIIHGLFKGK-NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            G  P V++Y+A++    + K NIS   ++FK M  + V+P++  YN+L+       N+D
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
            AL LF ++  +G  P+++TYNT+I GYC L    ID  FK
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK--IDDGFK 261


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 278/606 (45%), Gaps = 67/606 (11%)

Query: 7   NLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPN 66
           NL T    I  C C+       DL F    A L N+IK      AI F         +P 
Sbjct: 90  NLCTYGILIGSCCCAGRL----DLGF----AALGNVIKKGFRVDAIAF---------TPL 132

Query: 67  IAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIG 126
           +  L      SD  D+   V  +M  Q G   N F             Y+ L++      
Sbjct: 133 LKGLCADKRTSDAMDI---VLRRMT-QLGCIPNVF------------SYNILLKGLCDEN 176

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMN 186
           +  E++E+   M D G    PD+V                              Y  ++N
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVS-----------------------------YTTVIN 207

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           G  ++G ++ A+  + +++ RG +PN+VT + I+  LC    +  A  +   ++  G  P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           N  T++++++ +C   + ++A      M    + PD++ Y+ L+D L K GR  E  ++ 
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
            +   RGLK ++  + +++  Y   G +       D M+  G  PN   +SILI    +Q
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G++ +A  +F ++  + L P  +TY ++I   CKSG++ D    ++ MI   L P  +V 
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + LI+ L        A     + +   +  +   FN+++D  C+  R  ++ KLF LM  
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             +KPD+IT++ LI G    G +  A  L   M+  G+ PD +TY+ +I+G  K   +  
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L +F+ ME +GV+PDI  YN++L  L +     AA +L+  +T+ G + ++ TYN I+ 
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 602 GYCSLN 607
           G C  N
Sbjct: 628 GLCKNN 633



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 227/482 (47%), Gaps = 29/482 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y   G+  E++     M   G+   PD+V    LM  L  +    +  K+  +
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGV--EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  PN    + ++      G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  P+ VT+ T+I   CK  ++E A + +  M++  L P  I+Y+ 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L    +  +  EL+L  LDRG+ LD + F+S++D++   G V  + + +D M+  G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++I+YS LI G C  G++ EA  L   ++   ++P  +TY++LI+G+CK  ++ D  
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI------------- 455
            L+  M   G+ PD +  ++++ GL        FQ+ R      L++             
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGL--------FQTRRTAAAKELYVGITESGTQLELST 621

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G C+     + +++F  + + +++ +  T  ++I  +   G    A  LF  + 
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             GL PDV TYS +   L +   +     +F  ME NG   +  + N ++  L++  ++ 
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741

Query: 576 AA 577
            A
Sbjct: 742 RA 743



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 190/383 (49%), Gaps = 16/383 (4%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---DLVPDLIIYS 287
           +A  +FD LL  G   ++   +  +    + +    A   YN M      ++ P+L  Y 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLN 346
           ILI     AGRL  G   L   + +G ++D + F+ ++           A+     RM  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR---RLEPSLLTYSSLIDGFCKSGK 403
            G +PNV SY+IL+KGLC + R  EA  L  Q++        P +++Y+++I+GF K G 
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           L   +  Y  M+ RG+ P+ V  S +I  L     M  A+      V+  ++PN   +N+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C   +  + +     M    ++PDV+T+  L+  +   G  + A  +F  M KRG
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           L P++ TY  ++ G +  K   V +H +  LM RNG+ P+  ++++L+    K+  +D A
Sbjct: 335 LKPEITTYGTLLQG-YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 578 LKLFGQLTDRGLEPDIITYNTII 600
           + +F ++  +GL PD +TY T+I
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVI 416



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 124/235 (52%), Gaps = 8/235 (3%)

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            + P+L TY  LI   C +G+L  GF+   N+IK+G + DA+  + L+ GL  D      
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 443 QSV---RMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVITHTVL 494
             +   RMT    IPN+F +N L+ G C   R+ + ++L  +M     +  PDV+++T +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G   +G L  A   + +ML RG+ P+V+TYS+II  L K + +   + +   M +NGV
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            P+   YN +++          A+    ++   G+EPD++TYN+++   C    C
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC 320



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 134/321 (41%), Gaps = 74/321 (23%)

Query: 330 GIGDVGR-----AVQTYDRMLNGG---FLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
            + DV R     AV  Y+RM   G     PN+ +Y ILI   C  GRL       G V+ 
Sbjct: 60  ALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIK 119

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           +      + ++ L+ G C   +  D   +                           LR  
Sbjct: 120 KGFRVDAIAFTPLLKGLCADKRTSDAMDI--------------------------VLRRM 153

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVITHTVLIRGIA 499
            Q   +  IPN+F +N L+ G C   R+ + ++L  +M     +  PDV+++T +I G  
Sbjct: 154 TQ---LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM-------------- 545
            +G L  A   + +ML RG+ P+V+TYS+II  L K + +   + +              
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 546 ---------------------FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
                                 K M  +GV PD+  YN L++ L K      A K+F  +
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 585 TDRGLEPDIITYNTIICGYCS 605
           T RGL+P+I TY T++ GY +
Sbjct: 331 TKRGLKPEITTYGTLLQGYAT 351


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 166/614 (27%), Positives = 294/614 (47%), Gaps = 36/614 (5%)

Query: 17  KCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ----LIH 72
           + +  +   H+SD          A +    +P  A++FFK         + A+    L H
Sbjct: 77  RSFLQQDGPHLSDSALAPIWVSKALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAH 136

Query: 73  VLLQS----DMRDVASHVFDKMVIQFGKTY---NFFRLF-------RDSLGDFGCDYSFL 118
           +L       D R V      K  I  G+ +   +FF +        R   G F   ++ L
Sbjct: 137 ILFCGMFYLDARSVI-----KEWILLGREFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVL 191

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
           ++    +G ++E+ + F  M+   +         L+  L  S+  G      + M   G 
Sbjct: 192 VD----LGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGL 247

Query: 179 C----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++  L R+G +E A  +  ++  +G  P+IVT N ++      G +  A S
Sbjct: 248 SPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVS 307

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F+ +   G +P+V+T+++LIN FCK  ++ +AF+  + M +  L P+++ YS LID   
Sbjct: 308 VFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFC 367

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           KAG L E N+  +  +  GL+ +   ++S++DA   IGD+  A +    M   G   N++
Sbjct: 368 KAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIV 427

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ L+ GLC+ GR+ EA  LFG +L      +   Y+SL  G+ K+  +     + + M
Sbjct: 428 TYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM 487

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            K+ LKPD ++    I GL     + D++    + +   L  N +I+ TL+D   ++ + 
Sbjct: 488 NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKT 547

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           T+ V L   M    IK  V+T+ VLI G+   G +  A+  F  M + GL P+++ Y+A+
Sbjct: 548 TEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTAL 607

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I GL K   +    ++F  M   G++PD  +Y  L++  +K  N   AL L  ++ + G+
Sbjct: 608 IDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGM 667

Query: 590 EPDIITYNTIICGY 603
           E D+  Y ++I G+
Sbjct: 668 ELDLCAYTSLIWGF 681



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 226/450 (50%), Gaps = 10/450 (2%)

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +CR     GF V++ L N L+  G++E A     ++ +   +P + +CN++L RL  + +
Sbjct: 176 VCRP----GFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSK 231

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            G A S F  +++ G  P+V T++ +I    +E  LE A  L+  M    L PD++ Y+ 
Sbjct: 232 GGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNS 291

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDG  K G L     +     D G + DV+ ++S+++ +     + +A +    M   G
Sbjct: 292 LIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRG 351

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV++YS LI   C+ G L+EA   F  ++   L+P+  TY+SLID  CK G L + F
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAF 411

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L   M + G+  + V  + L++GL     M +A   F   ++     N  I+ +L  G 
Sbjct: 412 KLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGY 471

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            + K     + +   M   N+KPD++ +   I G+  Q  +  ++ +  +M+  GLT + 
Sbjct: 472 IKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANS 531

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
             Y+ +I   FK    +  +++ + M+  G+   +  Y VL++ L K   +  A++ F  
Sbjct: 532 YIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDH 591

Query: 584 LTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
           +T  GL+P+I+ Y  +I G C  N CL + 
Sbjct: 592 MTRNGLQPNIMIYTALIDGLCK-NDCLEEA 620



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 277/618 (44%), Gaps = 44/618 (7%)

Query: 12  WRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFK--WTHNCVSSPNIA- 68
           +R   + YC  +      + +  A +++   I      P   FF   W+   V  P    
Sbjct: 124 FRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGREFPGCDFFDMLWSTRNVCRPGFGV 183

Query: 69  --QLIHVLLQSDMRDVASHVFDKM----VIQFGKTYN--FFRLFRDSLGDFGCD------ 114
              L +VL+   M + A   F KM    V+   ++ N    RL + S G           
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV 243

Query: 115 ----------YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----- 159
                     Y+ +I    R G ++ +  +F  M   G  L PD+V    + L+D     
Sbjct: 244 VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKG--LRPDIVT--YNSLIDGYGKV 299

Query: 160 ---SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
              + +V  + ++  A        Y  L+N   +   I  AF     + QRG  PN+VT 
Sbjct: 300 GMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTY 359

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           + ++   C  G +  A+  F  ++ VG +PN  T+++LI+A CK   L +AF+L + M +
Sbjct: 360 STLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQ 419

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             +  +++ Y+ L+DGL + GR++E  EL    L  G  L+  +++S+   Y+    + +
Sbjct: 420 AGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEK 479

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+   + M      P+++ Y   I GLC+Q  + ++  +  +++   L  +   Y++LID
Sbjct: 480 AMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLID 539

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
            + K GK  +  +L   M   G+K   V   +LI+GL     +  A+R+F    R  L P
Sbjct: 540 AYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQP 599

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+ I+  L+DG C+     +   LF  M    I PD + +T LI G    G+   A+ L 
Sbjct: 600 NIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLR 659

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M++ G+  D+  Y+++I G  +   + +   +   M R G+ PD  +   LL    + 
Sbjct: 660 NRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYEL 719

Query: 572 CNLDAALKLFGQLTDRGL 589
            +++ AL L   +  RGL
Sbjct: 720 GDINEALALHDDMARRGL 737



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 212/456 (46%), Gaps = 48/456 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ Y ++G +  +V +F  M D G    PD++    L++C      + Q ++    
Sbjct: 289 YNSLIDGYGKVGMLTGAVSVFEEMKDAGC--EPDVITYNSLINCFCKFERIPQAFEYLHG 346

Query: 173 MRGKG--------------FC-------------------------VYEFLMNGLLRKGV 193
           M+ +G              FC                          Y  L++   + G 
Sbjct: 347 MKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGD 406

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +  AF +  ++ Q G   NIVT   +L  LC +G++  A  LF  LL  G   N   +++
Sbjct: 407 LNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTS 466

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L + + K   +EKA  +   M + +L PDL++Y   I GL +   +++   ++   +D G
Sbjct: 467 LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L  +  ++++++DAY  +G    AV     M + G    V++Y +LI GLC+ G + +A 
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAV 586

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             F  +    L+P+++ Y++LIDG CK+  L +  +L++ M+ +G+ PD +V + LI+G 
Sbjct: 587 RYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGN 646

Query: 434 M-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
           M     G+AL    + V + +  +L  + +L+ G  R  +      L   M    I PD 
Sbjct: 647 MKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQ 706

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +    L+R     G ++ A+ L   M +RGL    I
Sbjct: 707 VLCICLLRKYYELGDINEALALHDDMARRGLISGTI 742



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 31/244 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y ++GK  E+V +   M D+GI ++                            
Sbjct: 534 YTTLIDAYFKVGKTTEAVNLLQEMQDLGIKIT---------------------------- 565

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++GL + G+++ A      + + G  PNI+    ++  LC N  +  A +
Sbjct: 566 ---VVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKN 622

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF+ +L  G  P+ + +++LI+   K     +A  L N M+E+ +  DL  Y+ LI G  
Sbjct: 623 LFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFS 682

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + G+++    LL   L +G+  D V+   ++  Y  +GD+  A+  +D M   G +   I
Sbjct: 683 RYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTI 742

Query: 355 SYSI 358
             ++
Sbjct: 743 DITV 746



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 80/164 (48%)

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
           S R    P   +F+TL +    L    +  + F  M  + + P V +   L+  ++    
Sbjct: 172 STRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSK 231

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A+  F  M+  GL+P V TY+ +I  L +  ++     +F+ M+  G+ PDI  YN 
Sbjct: 232 GGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNS 291

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++   K   L  A+ +F ++ D G EPD+ITYN++I  +C   
Sbjct: 292 LIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFE 335


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 225/431 (52%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  +++   R G  E A  +   ++ +G  P IVT N +LK LC +G    A  +F  +
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+V +F+ LI  FC+  ++E+A ++Y  M    + PDL+ +S LI    + G++
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                 L      GL  D V+++ V+  +   G +  A++  D M+  G LP+V++Y+ L
Sbjct: 313 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 372

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GLC++ RL++A GL  ++  R + P L T+++LI G+C  GKL     L+D M+ + L
Sbjct: 373 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD V  + LI+G+   GD   A   +       + PN   ++ L+D  C   +  D   
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 492

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
               M    I P+++T+  +I+G    G++S       +M+   ++PD+ITY+ +IHG  
Sbjct: 493 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 552

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +     +  +ME+  V PD+  YN+L+N      N+  A  +F ++  +G+EPD  
Sbjct: 553 KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 612

Query: 595 TYNTIICGYCS 605
           TY ++I G+ +
Sbjct: 613 TYMSMINGHVT 623



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 224/442 (50%), Gaps = 51/442 (11%)

Query: 94  FGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           + K +  F+     + DFG       ++ LI  + R+G+I+E+++I+  M   GI   PD
Sbjct: 242 WDKAWEVFK----EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGI--KPD 295

Query: 149 LVQRLMSCLVD----SNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHM 200
           LV    SCL+        +       R MR  G      +Y  ++ G  R G++ +A  +
Sbjct: 296 LVS--FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRV 353

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             +++  G +P++VT N +L  LC   ++ +A  L + +   G  P++ TF+TLI+ +C 
Sbjct: 354 RDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCI 413

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
           E KL+KA QL++ M+   L PD++ Y+ LIDG+ + G L + N+L      R +  + V 
Sbjct: 414 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 473

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           +S ++D++   G V  A    D M+N G LPN+++Y+ +IKG C+ G + +      +++
Sbjct: 474 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 533

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRF 440
           + ++ P L+TY++LI G+ K  K+ D F L + M K  ++PD V  ++LING        
Sbjct: 534 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF------- 586

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
              SV   +    +IF  +   C +                  I+PD  T+  +I G  +
Sbjct: 587 ---SVHGNVQEAGWIFEKM---CAK-----------------GIEPDRYTYMSMINGHVT 623

Query: 501 QGSLSSAILLFFQMLKRGLTPD 522
            G+   A  L  +ML+RG  PD
Sbjct: 624 AGNSKEAFQLHDEMLQRGFAPD 645



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 206/378 (54%), Gaps = 5/378 (1%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A+  + ++     + N  T + +++ +CK  + +K   + + M +  + PD++ +++++D
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 199

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
             F+AG  +    L+ + + +GLK  +V ++SV+      G   +A + +  M + G  P
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V S++ILI G C+ G + EA  ++ ++  R ++P L+++S LI  F + GK+    +  
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 319

Query: 412 DNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M   GL PD V+ +++I G     LM DALR   + V    +P++  +NTL++G C+ 
Sbjct: 320 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 379

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           +R  D   L   M    + PD+ T T LI G   +G L  A+ LF  ML + L PD++TY
Sbjct: 380 RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 439

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I G+ +  ++     ++  M    + P+   Y++L++   ++  ++ A     ++ +
Sbjct: 440 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 499

Query: 587 RGLEPDIITYNTIICGYC 604
           +G+ P+I+TYN+II GYC
Sbjct: 500 KGILPNIMTYNSIIKGYC 517



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 157/330 (47%), Gaps = 5/330 (1%)

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            P   ++ +LI    ++ + +E  E     LD  + +     ++++ A    G    A  
Sbjct: 83  TPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 142

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            Y  + +     N  + +I++   C+     +   +  ++  R + P ++T++ ++D   
Sbjct: 143 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 202

Query: 400 KSGKLRDGFSLYDNMIKRGLKP-----DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           ++G      +L D+M+ +GLKP     ++V+  L  +G+   A   F +     + P++ 
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            F  L+ G CR+    + +K++  M    IKPD+++ + LI   A +G +  A+    +M
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
              GL PD + Y+ +I G  +   +S  L +   M   G  PD+  YN LLN L KE  L
Sbjct: 323 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 382

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             A  L  ++ +RG+ PD+ T+ T+I GYC
Sbjct: 383 LDAEGLLNEMRERGVPPDLCTFTTLIHGYC 412


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 257/494 (52%), Gaps = 10/494 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L++ Y   G +D ++ +F  +++ G++ +      L+    +S ++ +  +L   M+  G
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 430

Query: 178 FCVYEFLMNGLLR----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                F +N LLR      + E A  +  + +  G V NI T N ++  LC  G++  A 
Sbjct: 431 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEAC 489

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           SL D ++  G  PNVV+++ +I   C++  ++ A  +++ M+  DL P+++ YSILIDG 
Sbjct: 490 SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGN 549

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
           FK G  ++  +L    L   +      F+++++    +G +  A       L  GF+P+ 
Sbjct: 550 FKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSC 609

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ ++ G  ++G +  A  ++ ++    + P+++TY+SLI+GFCKS ++       D 
Sbjct: 610 MTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDE 669

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M ++GL+ D    S LI+G      M  A   FF+ + + L PN  ++N+++ G   L  
Sbjct: 670 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 729

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               +  +  M    I  D+ T+T LI G+  +G L  A  L+ +ML +G+ PD+IT+  
Sbjct: 730 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 789

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +++GL     +     + + M+R  + P + IYN L+    +E NL  A  L  ++ DRG
Sbjct: 790 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 849

Query: 589 LEPDIITYNTIICG 602
           L PD +TY+ +I G
Sbjct: 850 LVPDDVTYDILING 863



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 165/646 (25%), Positives = 314/646 (48%), Gaps = 65/646 (10%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
           S+ H      +Q + I A L   N+P  A+++FK                VLL   MR  
Sbjct: 89  SQIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSP 148

Query: 83  ASHVFDKMVIQ---FGKTYNFFRLFRDSL------GDFGCD---YSFLIENYVRIGKIDE 130
            +H   + ++     G +     +F D L       DF  D   +++L+  Y+R  +I+ 
Sbjct: 149 ETHGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIEN 208

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YYKLC-RAMRGKGFCVYEFLM 185
           +++ F  M    +      +  L++ LV  N +G+    Y K+  R + G  F V+  ++
Sbjct: 209 AIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVH-VMV 267

Query: 186 NGLLRKGVIENAFHMHRQ---------------VIQ--------------------RGFV 210
              L++G +E A    R+               +IQ                    RG+V
Sbjct: 268 RACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWV 327

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+  T   ++      G +  A  L + ++  G   N+V  ++L+  +C +  L+ A  L
Sbjct: 328 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNL 387

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           +N + E  L P+ + YS+LI+G   +G +++ +EL       G+   V   +S++  Y+ 
Sbjct: 388 FNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 447

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
                 A + +D  ++ G + N+ +Y+I++  LC+ G++ EAC L   ++ + + P++++
Sbjct: 448 APLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVS 506

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSV 445
           Y+ +I G C+ G +    S++ +M+ R LKP+ V  S+LI+G    GD   AL  F Q +
Sbjct: 507 YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 566

Query: 446 RMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
            + + P  F FNT+++G C+   +  A D +K F+  G     P  +T+  ++ G   +G
Sbjct: 567 SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFI---PSCMTYNSIVDGFIKEG 623

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++ SA+ ++ +M + G++P+V+TY+++I+G  K   I + L     M   G+  D+  Y+
Sbjct: 624 NIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYS 683

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            L++   K  ++++A  LF +L + GL P+ I YN++I G+  LN+
Sbjct: 684 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 729



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 242/475 (50%), Gaps = 8/475 (1%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F ++  D L      YS LIE     G I+++ E++  M   GI  S   V  L+   + 
Sbjct: 388 FNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 447

Query: 160 SNSVGQYYKLCRAMRGKGFC---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
           +    +  KL       G      Y  +M+ L + G ++ A  +   ++ +G VPN+V+ 
Sbjct: 448 APLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 507

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++   C  G +  ASS+F  +L    KPNVVT+S LI+   K+   EKA  L++ M+ 
Sbjct: 508 NDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 567

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           +++ P    ++ +I+GL K G++ E  + L   L+ G     + ++S++D ++  G++  
Sbjct: 568 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 627

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+  Y  M   G  PNV++Y+ LI G C+  R+  A     ++  + LE  +  YS+LID
Sbjct: 628 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 687

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           GFCK   +     L+  +++ GL P+ +V + +I+G      M  AL ++ + +   +  
Sbjct: 688 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 747

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +L  + TL+DG  +  R      L+M M    I PD+IT  VL+ G+ ++G L +A  + 
Sbjct: 748 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 807

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
            +M ++ +TP V+ Y+ +I G F+  N+     +   M   G+ PD   Y++L+N
Sbjct: 808 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 270/536 (50%), Gaps = 18/536 (3%)

Query: 85  HVFDKMVIQFGKTYNFFRLFRDSLG-----DFGCDYSFLIENYVRIGKIDESVEIFAYMS 139
           HV  +  ++ G+       FR++       D G  YS +I+   +    +  +E+   M 
Sbjct: 264 HVMVRACLKEGRVEEAEEYFRETKERGVKLDAGA-YSIIIQAVCKKPNSNLGLELLEEMK 322

Query: 140 DMGIYLSP-DLVQRLMSCLVDSNSVGQYYKLCRAM----RGKGFCVYEFLMNGLLRKGVI 194
           + G   S       +++C+   N V +  +L   M    +     V   LM G   +G +
Sbjct: 323 ERGWVPSEATFTSVIVACVAQGNMV-EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 381

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           ++A ++  ++ + G  PN VT + +++  C +G I  AS L+  + L G  P+V   ++L
Sbjct: 382 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 441

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           +  + K    E+A +L++  ++   V ++  Y+I++  L K G++ E   LL   +++G+
Sbjct: 442 LRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 500

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             +VV ++ ++  +   G++  A   +  ML     PNV++YSILI G  ++G   +A  
Sbjct: 501 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 560

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
           LF Q+L   + P+  T++++I+G CK G++ +      N ++ G  P  +  + +++G +
Sbjct: 561 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 620

Query: 435 GD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
            +     AL  + +     + PN+  + +L++G C+  R    +K    M    ++ DV 
Sbjct: 621 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVT 680

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
            ++ LI G   +  + SA  LFF++L+ GL+P+ I Y+++I G     N+   L  +K M
Sbjct: 681 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 740

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             + +  D+  Y  L++ L+KE  L  A  L+ ++  +G+ PDIIT++ ++ G C+
Sbjct: 741 INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCN 796



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 162/362 (44%), Gaps = 52/362 (14%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
           D+AS VF  M            L RD L      YS LI+   + G  ++++++F  M  
Sbjct: 521 DMASSVFSDM------------LARD-LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 567

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIEN 196
           + I  +      +++ L     + +     +    +GF      Y  +++G +++G I++
Sbjct: 568 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 627

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  ++R++ + G  PN+VT   ++   C + +I  A    D +   G + +V  +S LI+
Sbjct: 628 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 687

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIY------------------------------ 286
            FCK   +E A  L+  ++E+ L P+ I+Y                              
Sbjct: 688 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 747

Query: 287 -----SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
                + LIDGL K GRL   ++L +  L +G+  D++ F  +++     G +  A +  
Sbjct: 748 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 807

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + M      P+V+ Y+ LI G  ++G L EA  L  ++L R L P  +TY  LI+G  K 
Sbjct: 808 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 867

Query: 402 GK 403
            +
Sbjct: 868 DR 869



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 10/194 (5%)

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +A+  F   +   +IP +   N L+    R     +   L+  M +  I  D  T  V++
Sbjct: 208 NAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMV 267

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           R    +G +  A   F +  +RG+  D   YS II  + K  N ++GL + + M+  G  
Sbjct: 268 RACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWV 327

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS---------- 605
           P  A +  ++   + + N+  AL+L  ++ + G   +++   +++ GYC+          
Sbjct: 328 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNL 387

Query: 606 LNSCLIDGYFKSQI 619
            N    DG F +++
Sbjct: 388 FNKITEDGLFPNKV 401


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 233/411 (56%), Gaps = 5/411 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           + +Q+  +G VP++VT + ++   C  GQ+  + S+   +L +G +PN +  +TL+   C
Sbjct: 32  LSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLC 91

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            + +++K+   ++ ++      D + Y IL++GL K G  +   +LL T  DR  + DVV
Sbjct: 92  LKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVV 151

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           ++S+++D       V  A   Y  M   G  P+VI+Y+ LI G C  G+L+EA GL  ++
Sbjct: 152 MYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM 211

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD- 436
           +++ + P++ TY++LID  CK GK+++  +L   M K+G+KPD V+ S+L++G  L+G+ 
Sbjct: 212 ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEV 271

Query: 437 --ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A + F   V+  + P+++ +N +++G C+ KR  + + L   M   N+ PD +T++ L
Sbjct: 272 QKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSL 331

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+   G +++ + L  +M  RG   +++TY++++ GL K +N+   + +F  M+  G+
Sbjct: 332 IDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGI 391

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            P+   Y  L++ L K   L     LF  L  +G   D+ TY  +I G C 
Sbjct: 392 QPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK 442



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 236/480 (49%), Gaps = 34/480 (7%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S LI  +  +G++  S  +   +  +G   +  ++  LM  L     V +       +  
Sbjct: 49  SILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVA 108

Query: 176 KGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF +    Y  L+NGL + G    A  + R +  R   P++V  + I+  LC +  +  
Sbjct: 109 QGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDE 168

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L+  +   G  P+V+T++TLI  FC   +L +AF L N M+  ++ P++  Y+ LID
Sbjct: 169 AYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLID 228

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G++KE   LL     +G+K DVV++S +MD Y  +G+V +A Q +  M+  G  P
Sbjct: 229 TLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNP 288

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V SY+I+I GLC+  R+ EA  L  ++L + + P  +TYSSLIDG CK G++     L 
Sbjct: 289 DVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLT 348

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             M  RG +P                              NL  +N+L+DG C+ +    
Sbjct: 349 KEMHHRG-QP-----------------------------ANLVTYNSLLDGLCKNQNLDK 378

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            + LFM M    I+P+  T+T LI G+   G L     LF  +L +G   DV TY+ +I 
Sbjct: 379 AIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMIS 438

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL K       L M   ME NG  P+   + +++  L+++   D A KL  ++  +GL P
Sbjct: 439 GLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 209/401 (52%), Gaps = 5/401 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           +P I+   KIL  L          SL   +   G  P++VT S LIN FC   ++  +F 
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +   ++++   P+ II + L+ GL   G +K+        + +G ++D V +  +++   
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            IG+   A++    + +    P+V+ YS +I GLC+   + EA  L+ ++  R + P ++
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQS 444
           TY++LI GFC +G+L + F L + MI + + P+    + LI+     G + ++       
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            +  + P++ I++ LMDG C +       ++F++M    + PDV ++ ++I G+     +
Sbjct: 247 TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRV 306

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ L  +ML + + PD +TYS++I GL K   I+  L + K M   G   ++  YN L
Sbjct: 307 DEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSL 366

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L+ L K  NLD A+ LF ++ +RG++P+  TY  +I G C 
Sbjct: 367 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 407



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 191/372 (51%), Gaps = 5/372 (1%)

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +LL+   P ++ F  ++ +  K         L   M    +VPDL+  SILI+     G+
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +     +L   L  G + + ++ +++M      G+V +++  +D+++  GF  + +SY I
Sbjct: 61  MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ GLC+ G    A  L   +  R   P ++ YS++IDG CK   + + + LY  M  RG
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180

Query: 419 LKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           + PD +     +C   + G + +A     + +   + PN++ +NTL+D  C+  +  ++ 
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESK 240

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L  +M    +KPDV+ +++L+ G    G +  A  +F  M++ G+ PDV +Y+ II+GL
Sbjct: 241 NLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGL 300

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            KGK +   +++ + M    + PD   Y+ L++ L K   +   L L  ++  RG   ++
Sbjct: 301 CKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANL 360

Query: 594 ITYNTIICGYCS 605
           +TYN+++ G C 
Sbjct: 361 VTYNSLLDGLCK 372



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 141/278 (50%), Gaps = 8/278 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLVDSNSVGQYYKLC 170
           Y+ LI+   + GK+ ES  + A M+  G+   PD+V    LM   CLV      +   L 
Sbjct: 223 YNTLIDTLCKEGKVKESKNLLAVMTKKGV--KPDVVIYSILMDGYCLVGEVQKAKQIFLV 280

Query: 171 RAMRGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
               G    VY +  ++NGL +   ++ A ++ R+++ +  +P+ VT + ++  LC  G+
Sbjct: 281 MVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGR 340

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I     L   +   G   N+VT+++L++  CK   L+KA  L+  M E  + P+   Y+ 
Sbjct: 341 ITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 400

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDGL K GRLK+G  L    L +G  +DV  ++ ++      G    A+    +M + G
Sbjct: 401 LIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNG 460

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            +PN +++ I+I+ L ++    +A  L  +++ + L P
Sbjct: 461 CIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 162/348 (46%), Gaps = 43/348 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           YS +I+   +   +DE+ ++++ M+  GI+  PD++    L+     +  + + + L   
Sbjct: 153 YSTIIDGLCKDKLVDEAYDLYSEMNARGIF--PDVITYTTLICGFCLAGQLMEAFGLLNE 210

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  K        Y  L++ L ++G ++ + ++   + ++G  P++V  + ++   C+ G+
Sbjct: 211 MILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGE 270

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F V++  G  P+V +++ +IN  CK  ++++A  L   M+  +++PD + YS 
Sbjct: 271 VQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSS 330

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDGL K GR+    +L      RG   ++V ++S++D      ++ +A+  + +M   G
Sbjct: 331 LIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390

Query: 349 FLPN-----------------------------------VISYSILIKGLCQQGRLVEAC 373
             PN                                   V +Y+++I GLC++G   EA 
Sbjct: 391 IQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEAL 450

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
            +  ++      P+ +T+  +I    +  +      L   MI +GL P
Sbjct: 451 AMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 252/527 (47%), Gaps = 48/527 (9%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
           A HVFD+             L R  + D    Y+ L+       +  E++E+   M+D G
Sbjct: 36  ARHVFDE-------------LLRRGIPDV-FSYNILLNGLCDENRSQEALELLHIMADDG 81

Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHR 202
               PD+V                              Y  ++NG  ++G ++  +  + 
Sbjct: 82  GDCPPDVVS-----------------------------YSTVINGFFKEGDLDKTYSTYN 112

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +++ +   PN+VT N I+  LC    +  A  +   ++  G  P+ +T++++++ FC   
Sbjct: 113 EMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSG 172

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           + ++A      M    + PD++ Y+ L+D L K GR  E  ++  +   RGLK ++  + 
Sbjct: 173 QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYG 232

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++  Y   G +       D M+  G  PN   +SIL+    +Q ++ EA  +F ++  +
Sbjct: 233 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 292

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            L P+ +TY ++I   CKSG++ D    ++ MI  GL P  +V + LI+GL        A
Sbjct: 293 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 352

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                + +   +  N   FN+++D  C+  R  ++ KLF LM    +KPD+IT++ LI G
Sbjct: 353 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 412

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
               G +  A  L   M+  G+ PD +TYS +I+G  K   +   L +F+ ME +GV+PD
Sbjct: 413 YCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPD 472

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           I  YN++L  L +     AA +L+  +T  G + ++ TYN I+ G C
Sbjct: 473 IITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLC 519



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 218/420 (51%), Gaps = 8/420 (1%)

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK--PNVVTFS 252
           E+A H+  ++++RG +P++ + N +L  LC   +   A  L  ++   G    P+VV++S
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           T+IN F KE  L+K +  YN M++  + P+++ Y+ +I  L KA  + +  E+L T +  
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G+  D + ++S++  +   G    A+    +M + G  P+V++Y+ L+  LC+ GR  EA
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-- 430
             +F  +  R L+P + TY +L+ G+   G L +   L D M++ G+ P+  V S+L+  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 431 ---NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                 + +A+  F +  +  L PN   +  ++   C+  R  D +  F  M    + P 
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            I +  LI G+ +      A  L  +ML RG+  + I +++II    K   +     +F 
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           LM R GV PDI  Y+ L++       +D A KL   +   G++PD +TY+T+I GYC ++
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKIS 452



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 229/495 (46%), Gaps = 9/495 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    +   +D+++E+   M   G+         ++     S    +     + MR
Sbjct: 126 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMR 185

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  LM+ L + G    A  +   + +RG  P I T   +L+     G + 
Sbjct: 186 SDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 245

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               L D+++  G  PN   FS L+ A+ K+ K+E+A  +++ M +  L P+ + Y  +I
Sbjct: 246 EMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVI 305

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K+GR+++        +D GL    +V++S++          RA +    ML+ G  
Sbjct: 306 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 365

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            N I ++ +I   C++GR++E+  LF  ++   ++P ++TYS+LIDG+C +GK+ +   L
Sbjct: 366 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 425

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
             +M+  G+KPD V  S LING      M DAL  F +     + P++  +N ++ G  +
Sbjct: 426 LASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQ 485

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            +R     +L++ +     + ++ T+ +++ G+        A+ +F  +    L  +  T
Sbjct: 486 TRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEART 545

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           ++ +I  L K         +F     NG+ P+   Y ++   +I +  L+   +LF  + 
Sbjct: 546 FNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 605

Query: 586 DRGLEPDIITYNTII 600
           D G   D    N I+
Sbjct: 606 DNGCTVDSGMLNFIV 620



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 212/485 (43%), Gaps = 49/485 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  +   G+  E++     M   G+   PD+V    LM  L  +    +  K+  +
Sbjct: 161 YNSIVHGFCSSGQPKEAIVFLKKMRSDGV--EPDVVTYNSLMDYLCKNGRCTEARKIFDS 218

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  PN    + ++       +
Sbjct: 219 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 278

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  PN VT+  +I   CK  ++E A   +  M++  L P  I+Y+ 
Sbjct: 279 VEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 338

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL    + +   EL+L  LDRG+ L+ + F+S++D++   G V  + + +D M+  G
Sbjct: 339 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 398

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++I+YS LI G C  G++ EA  L   ++   ++P  +TYS+LI+G+CK  +++D  
Sbjct: 399 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDAL 458

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM---------------------------------- 434
            L+  M   G+ PD +  ++++ GL                                   
Sbjct: 459 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGL 518

Query: 435 ------GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                  DALR F     M L      FN ++D   ++ R  +   LF+      + P+ 
Sbjct: 519 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 578

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF-KGKNISVGLHMFK 547
            T+ ++   I  QG L     LF  M   G T D    + I+  L  +G+    G ++  
Sbjct: 579 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSM 638

Query: 548 LMERN 552
           + E++
Sbjct: 639 IDEKH 643



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 91/173 (52%), Gaps = 2/173 (1%)

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG--MYNIKPDVITHTVLIR 496
           R  F  +    IP++F +N L++G C   R+ + ++L  +M     +  PDV++++ +I 
Sbjct: 37  RHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVIN 96

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G   +G L      + +ML + ++P+V+TY++II  L K + +   + +   M ++GV P
Sbjct: 97  GFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMP 156

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           D   YN +++          A+    ++   G+EPD++TYN+++   C    C
Sbjct: 157 DCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 209



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 135/290 (46%), Gaps = 12/290 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLC 170
           ++ +I+++ + G++ ES ++F  M  +G+   PD++    S L+D    +  + +  KL 
Sbjct: 371 FNSIIDSHCKEGRVIESEKLFDLMVRIGV--KPDIIT--YSTLIDGYCLAGKMDEATKLL 426

Query: 171 RAMRGKGF---CV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            +M   G    CV Y  L+NG  +   +++A  + R++   G  P+I+T N IL+ L   
Sbjct: 427 ASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQT 486

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            +   A  L+  +   G +  + T++ +++  CK    + A +++  +  MDL  +   +
Sbjct: 487 RRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 546

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +I+ID L K GR  E  +L +     GL  +   +  + +  +G G +    Q +  M +
Sbjct: 547 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 606

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
            G   +    + +++ L Q+G +  A      +  +       T S  ID
Sbjct: 607 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 656



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 106/263 (40%), Gaps = 44/263 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV------QRLMSCLVDSNSVGQYYK 168
           YS LI  Y +I ++ +++ +F  M   G+  SPD++      Q L      + +   Y  
Sbjct: 441 YSTLINGYCKISRMKDALVLFREMESSGV--SPDIITYNIILQGLFQTRRTAAAKELYVG 498

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + ++ R      Y  +++GL +  + ++A  M                            
Sbjct: 499 ITKSGRQLELSTYNIILHGLCKNKLTDDALRM---------------------------- 530

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
                  F  L L+  K    TF+ +I+A  K  + ++A  L+       LVP+   Y +
Sbjct: 531 -------FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 583

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           + + +   G L+E ++L L+  D G  +D  + + ++   +  G++ RA  TY  M++  
Sbjct: 584 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEK 642

Query: 349 FLPNVISYSILIKGLCQQGRLVE 371
                 S + L   L   G+  E
Sbjct: 643 HFSLEASTASLFIDLLSGGKYQE 665


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 257/494 (52%), Gaps = 10/494 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L++ Y   G +D ++ +F  +++ G++ +      L+    +S ++ +  +L   M+  G
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 390

Query: 178 FCVYEFLMNGLLR----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                F +N LLR      + E A  +  + +  G V NI T N ++  LC  G++  A 
Sbjct: 391 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEAC 449

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           SL D ++  G  PNVV+++ +I   C++  ++ A  +++ M+  DL P+++ YSILIDG 
Sbjct: 450 SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGN 509

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
           FK G  ++  +L    L   +      F+++++    +G +  A       L  GF+P+ 
Sbjct: 510 FKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSC 569

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ ++ G  ++G +  A  ++ ++    + P+++TY+SLI+GFCKS ++       D 
Sbjct: 570 MTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDE 629

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M ++GL+ D    S LI+G      M  A   FF+ + + L PN  ++N+++ G   L  
Sbjct: 630 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 689

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               +  +  M    I  D+ T+T LI G+  +G L  A  L+ +ML +G+ PD+IT+  
Sbjct: 690 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 749

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +++GL     +     + + M+R  + P + IYN L+    +E NL  A  L  ++ DRG
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 809

Query: 589 LEPDIITYNTIICG 602
           L PD +TY+ +I G
Sbjct: 810 LVPDDVTYDILING 823



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 165/646 (25%), Positives = 314/646 (48%), Gaps = 65/646 (10%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
           S+ H      +Q + I A L   N+P  A+++FK                VLL   MR  
Sbjct: 49  SQIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSP 108

Query: 83  ASHVFDKMVIQ---FGKTYNFFRLFRDSL------GDFGCD---YSFLIENYVRIGKIDE 130
            +H   + ++     G +     +F D L       DF  D   +++L+  Y+R  +I+ 
Sbjct: 109 ETHGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIEN 168

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YYKLC-RAMRGKGFCVYEFLM 185
           +++ F  M    +      +  L++ LV  N +G+    Y K+  R + G  F V+  ++
Sbjct: 169 AIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVH-VMV 227

Query: 186 NGLLRKGVIENAFHMHRQ---------------VIQ--------------------RGFV 210
              L++G +E A    R+               +IQ                    RG+V
Sbjct: 228 RACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWV 287

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+  T   ++      G +  A  L + ++  G   N+V  ++L+  +C +  L+ A  L
Sbjct: 288 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNL 347

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           +N + E  L P+ + YS+LI+G   +G +++ +EL       G+   V   +S++  Y+ 
Sbjct: 348 FNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 407

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
                 A + +D  ++ G + N+ +Y+I++  LC+ G++ EAC L   ++ + + P++++
Sbjct: 408 APLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVS 466

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSV 445
           Y+ +I G C+ G +    S++ +M+ R LKP+ V  S+LI+G    GD   AL  F Q +
Sbjct: 467 YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 526

Query: 446 RMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
            + + P  F FNT+++G C+   +  A D +K F+  G     P  +T+  ++ G   +G
Sbjct: 527 SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFI---PSCMTYNSIVDGFIKEG 583

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++ SA+ ++ +M + G++P+V+TY+++I+G  K   I + L     M   G+  D+  Y+
Sbjct: 584 NIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYS 643

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            L++   K  ++++A  LF +L + GL P+ I YN++I G+  LN+
Sbjct: 644 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 689



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 242/475 (50%), Gaps = 8/475 (1%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F ++  D L      YS LIE     G I+++ E++  M   GI  S   V  L+   + 
Sbjct: 348 FNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 407

Query: 160 SNSVGQYYKLCRAMRGKGFC---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
           +    +  KL       G      Y  +M+ L + G ++ A  +   ++ +G VPN+V+ 
Sbjct: 408 APLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 467

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++   C  G +  ASS+F  +L    KPNVVT+S LI+   K+   EKA  L++ M+ 
Sbjct: 468 NDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 527

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           +++ P    ++ +I+GL K G++ E  + L   L+ G     + ++S++D ++  G++  
Sbjct: 528 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 587

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+  Y  M   G  PNV++Y+ LI G C+  R+  A     ++  + LE  +  YS+LID
Sbjct: 588 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 647

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           GFCK   +     L+  +++ GL P+ +V + +I+G      M  AL ++ + +   +  
Sbjct: 648 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 707

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +L  + TL+DG  +  R      L+M M    I PD+IT  VL+ G+ ++G L +A  + 
Sbjct: 708 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 767

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
            +M ++ +TP V+ Y+ +I G F+  N+     +   M   G+ PD   Y++L+N
Sbjct: 768 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 822



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 270/536 (50%), Gaps = 18/536 (3%)

Query: 85  HVFDKMVIQFGKTYNFFRLFRDSLG-----DFGCDYSFLIENYVRIGKIDESVEIFAYMS 139
           HV  +  ++ G+       FR++       D G  YS +I+   +    +  +E+   M 
Sbjct: 224 HVMVRACLKEGRVEEAEEYFRETKERGVKLDAGA-YSIIIQAVCKKPNSNLGLELLEEMK 282

Query: 140 DMGIYLSP-DLVQRLMSCLVDSNSVGQYYKLCRAM----RGKGFCVYEFLMNGLLRKGVI 194
           + G   S       +++C+   N V +  +L   M    +     V   LM G   +G +
Sbjct: 283 ERGWVPSEATFTSVIVACVAQGNMV-EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 341

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           ++A ++  ++ + G  PN VT + +++  C +G I  AS L+  + L G  P+V   ++L
Sbjct: 342 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 401

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           +  + K    E+A +L++  ++   V ++  Y+I++  L K G++ E   LL   +++G+
Sbjct: 402 LRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 460

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             +VV ++ ++  +   G++  A   +  ML     PNV++YSILI G  ++G   +A  
Sbjct: 461 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 520

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
           LF Q+L   + P+  T++++I+G CK G++ +      N ++ G  P  +  + +++G +
Sbjct: 521 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 580

Query: 435 GD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
            +     AL  + +     + PN+  + +L++G C+  R    +K    M    ++ DV 
Sbjct: 581 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVT 640

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
            ++ LI G   +  + SA  LFF++L+ GL+P+ I Y+++I G     N+   L  +K M
Sbjct: 641 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 700

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             + +  D+  Y  L++ L+KE  L  A  L+ ++  +G+ PDIIT++ ++ G C+
Sbjct: 701 INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCN 756



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 162/362 (44%), Gaps = 52/362 (14%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
           D+AS VF  M            L RD L      YS LI+   + G  ++++++F  M  
Sbjct: 481 DMASSVFSDM------------LARD-LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 527

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIEN 196
           + I  +      +++ L     + +     +    +GF      Y  +++G +++G I++
Sbjct: 528 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 587

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  ++R++ + G  PN+VT   ++   C + +I  A    D +   G + +V  +S LI+
Sbjct: 588 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 647

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIY------------------------------ 286
            FCK   +E A  L+  ++E+ L P+ I+Y                              
Sbjct: 648 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 707

Query: 287 -----SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
                + LIDGL K GRL   ++L +  L +G+  D++ F  +++     G +  A +  
Sbjct: 708 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 767

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + M      P+V+ Y+ LI G  ++G L EA  L  ++L R L P  +TY  LI+G  K 
Sbjct: 768 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 827

Query: 402 GK 403
            +
Sbjct: 828 DR 829



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 10/194 (5%)

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +A+  F   +   +IP +   N L+    R     +   L+  M +  I  D  T  V++
Sbjct: 168 NAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMV 227

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           R    +G +  A   F +  +RG+  D   YS II  + K  N ++GL + + M+  G  
Sbjct: 228 RACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWV 287

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS---------- 605
           P  A +  ++   + + N+  AL+L  ++ + G   +++   +++ GYC+          
Sbjct: 288 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNL 347

Query: 606 LNSCLIDGYFKSQI 619
            N    DG F +++
Sbjct: 348 FNKITEDGLFPNKV 361


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 278/606 (45%), Gaps = 67/606 (11%)

Query: 7   NLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPN 66
           NL T    I  C C+       DL F    A L N+IK      AI F         +P 
Sbjct: 90  NLCTYGILIGSCCCAGRL----DLGF----AALGNVIKKGFRVDAIAF---------TPL 132

Query: 67  IAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIG 126
           +  L      SD  D+   V  +M  Q G   N F             Y+ L++      
Sbjct: 133 LKGLCADKRTSDAMDI---VLRRMT-QLGCIPNVF------------SYNILLKGLCDEN 176

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMN 186
           +  E++E+   M D G    PD+V                              Y  ++N
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVS-----------------------------YTTVIN 207

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           G  ++G ++ A+  + +++ RG +PN+VT + I+  LC    +  A  +   ++  G  P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           N  T++++++ +C   + ++A      M    + PD++ Y+ L+D L K GR  E  ++ 
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
            +   RGLK ++  + +++  Y   G +       D M+  G  PN   +SILI    +Q
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G++ +A  +F ++  + L P  +TY ++I   CKSG++ D    ++ MI   L P  +V 
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + LI+ L        A     + +   +  +   FN+++D  C+  R  ++ KLF LM  
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             +KPD+IT++ LI G    G +  A  L   M+  G+ PD +TY+ +I+G  K   +  
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L +F+ ME +GV+PDI  YN++L  L +     AA +L+  +T+ G + ++ TYN I+ 
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 602 GYCSLN 607
           G C  N
Sbjct: 628 GLCKNN 633



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 235/495 (47%), Gaps = 52/495 (10%)

Query: 162 SVGQYYKLCRAMRGK---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           +V +Y ++ RA   +     C Y  L+      G ++  F     VI++GF  + +    
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 219 ILKRLCINGQIGNASSLFDVLL----LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           +LK LC + +  +A    D++L     +G  PNV +++ L+   C E + ++A +L  +M
Sbjct: 132 LLKGLCADKRTSDA---MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM 188

Query: 275 ME--MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            +   D  PD++ Y+ +I+G FK G L +        LDRG+  +VV +SS++ A     
Sbjct: 189 PDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ 248

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
            + +A++    M+  G +PN  +Y+ ++ G C  G+  EA G   ++    +EP ++TY+
Sbjct: 249 AMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYN 308

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQS-----VRM 447
           SL+D  CK+G+  +   ++D+M KRGLKP+      L+ G                 VR 
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 368

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            + PN ++F+ L+    +  +    + +F  M    + PD +T+  +I  +   G +  A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLF------KGKNISVGL------------------ 543
           +  F QM+   L+P  I Y+++IH L       K K + + +                  
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDS 488

Query: 544 -----------HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
                       +F LM R GV PDI  Y+ L++       +D A KL   +   G++PD
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548

Query: 593 IITYNTIICGYCSLN 607
            +TYNT+I GYC ++
Sbjct: 549 CVTYNTLINGYCKIS 563



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 227/482 (47%), Gaps = 29/482 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y   G+  E++     M   G+   PD+V    LM  L  +    +  K+  +
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGV--EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  PN    + ++      G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  P+ VT+ T+I   CK  ++E A + +  M++  L P  I+Y+ 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L    +  +  EL+L  LDRG+ LD + F+S++D++   G V  + + +D M+  G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++I+YS LI G C  G++ EA  L   ++   ++P  +TY++LI+G+CK  ++ D  
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI------------- 455
            L+  M   G+ PD +  ++++ GL        FQ+ R      L++             
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGL--------FQTRRTAAAKELYVGITESGTQLELST 621

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G C+     + +++F  + + +++ +  T  ++I  +   G    A  LF  + 
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             GL PDV TYS +   L +   +     +F  ME NG   +  + N ++  L++  ++ 
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741

Query: 576 AA 577
            A
Sbjct: 742 RA 743



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 191/387 (49%), Gaps = 16/387 (4%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---DLVPDLIIYS 287
           +A  +FD LL  G   ++   +  +    + +    A   YN M      ++ P+L  Y 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLN 346
           ILI     AGRL  G   L   + +G ++D + F+ ++           A+     RM  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR---RLEPSLLTYSSLIDGFCKSGK 403
            G +PNV SY+IL+KGLC + R  EA  L  Q++        P +++Y+++I+GF K G 
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           L   +  Y  M+ RG+ P+ V  S +I  L     M  A+      V+  ++PN   +N+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C   +  + +     M    ++PDV+T+  L+  +   G  + A  +F  M KRG
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           L P++ TY  ++ G +  K   V +H +  LM RNG+ P+  ++++L+    K+  +D A
Sbjct: 335 LKPEITTYGTLLQG-YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
           + +F ++  +GL PD +TY T+I   C
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILC 420



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 124/235 (52%), Gaps = 8/235 (3%)

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            + P+L TY  LI   C +G+L  GF+   N+IK+G + DA+  + L+ GL  D      
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 443 QSV---RMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVITHTVL 494
             +   RMT    IPN+F +N L+ G C   R+ + ++L  +M     +  PDV+++T +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G   +G L  A   + +ML RG+ P+V+TYS+II  L K + +   + +   M +NGV
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            P+   YN +++          A+    ++   G+EPD++TYN+++   C    C
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC 320


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 154/576 (26%), Positives = 268/576 (46%), Gaps = 59/576 (10%)

Query: 37  AILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGK 96
           A L N+IK      AI F         +P +  L      SD  D+   V  +M  Q G 
Sbjct: 112 AALGNVIKKGFIVDAIAF---------TPMLKGLCADKRTSDAMDI---VLRRMT-QLGC 158

Query: 97  TYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
             N F             Y+ L++      +  E++E+   M D G    PD+V      
Sbjct: 159 IPNVF------------SYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVS----- 201

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
                                   Y  ++NG  ++G ++ A+  + +++ RG +PN+VT 
Sbjct: 202 ------------------------YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           + I+  LC    +  A  +   ++  G  PN  T++++++ +C   + ++A      M  
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             + PD++ Y+ L+D L K GR  E  ++  +   RGLK ++  + +++  Y   G +  
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
                D M+  G  PN   +SILI    +QG++ +A  +F ++  + L P  +TY ++I 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
             CKSG++ D    ++ MI   L P  +V + LI+ L        A     + +   +  
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +   FN+++D  C+  R  ++ KLF LM    +KPD+IT++ LI G    G +  A  L 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             M+  G+ PD +TY+ +I+G  K   +   L +F+ ME +GV+PDI  YN++L  L + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
               AA +L+  +T+ G + ++ TYN I+ G C  N
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 227/482 (47%), Gaps = 29/482 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y   G+  E++     M   G+   PD+V    LM  L  +    +  K+  +
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGV--EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  PN    + ++      G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  P+ VT+ T+I   CK  ++E A + +  M++  L P  I+Y+ 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L    +  +  EL+L  LDRG+ LD + F+S++D++   G V  + + +D M+  G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++I+YS LI G C  G++ EA  L   ++   ++P  +TY++LI+G+CK  ++ D  
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI------------- 455
            L+  M   G+ PD +  ++++ GL        FQ+ R      L++             
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGL--------FQTRRTAAAKELYVGITESGTQLELST 621

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G C+     + +++F  + + +++ +  T  ++I  +   G    A  LF  + 
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             GL PDV TYS +   L +   +     +F  ME NG   +  + N ++  L++  ++ 
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741

Query: 576 AA 577
            A
Sbjct: 742 RA 743



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 188/383 (49%), Gaps = 16/383 (4%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---DLVPDLIIYS 287
           +A  +FD LL  G   ++   +  +    + +    A   YN M      ++ P+L  Y 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLN 346
           IL+     AGRL  G   L   + +G  +D + F+ ++           A+     RM  
Sbjct: 96  ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR---RLEPSLLTYSSLIDGFCKSGK 403
            G +PNV SY+IL+KGLC   R  EA  L  Q++        P +++Y+++I+GF K G 
Sbjct: 156 LGCIPNVFSYNILLKGLCDDNRSQEALELL-QMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           L   +  Y  M+ RG+ P+ V  S +I  L     M  A+      V+  ++PN   +N+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C   +  + +     M    ++PDV+T+  L+  +   G  + A  +F  M KRG
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           L P++ TY  ++ G +  K   V +H +  LM RNG+ P+  ++++L+    K+  +D A
Sbjct: 335 LKPEITTYGTLLQG-YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 578 LKLFGQLTDRGLEPDIITYNTII 600
           + +F ++  +GL PD +TY T+I
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVI 416



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 8/235 (3%)

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            + P+L TY  L+   C +G+L  GF+   N+IK+G   DA+  + ++ GL  D      
Sbjct: 86  EVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDA 145

Query: 443 QSV---RMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVITHTVL 494
             +   RMT    IPN+F +N L+ G C   R+ + ++L  +M     +  PDV+++T +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G   +G L  A   + +ML RG+ P+V+TYS+II  L K + +   + +   M +NGV
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            P+   YN +++          A+    ++   G+EPD++TYN+++   C    C
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC 320



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 134/321 (41%), Gaps = 74/321 (23%)

Query: 330 GIGDVGR-----AVQTYDRMLNGG---FLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
            + DV R     AV  Y+RM   G     PN+ +Y IL+   C  GRL       G V+ 
Sbjct: 60  ALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIK 119

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           +      + ++ ++ G C   +  D   +                           LR  
Sbjct: 120 KGFIVDAIAFTPMLKGLCADKRTSDAMDI--------------------------VLRRM 153

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVITHTVLIRGIA 499
            Q   +  IPN+F +N L+ G C   R+ + ++L  +M     +  PDV+++T +I G  
Sbjct: 154 TQ---LGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM-------------- 545
            +G L  A   + +ML RG+ P+V+TYS+II  L K + +   + +              
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 546 ---------------------FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
                                 K M  +GV PD+  YN L++ L K      A K+F  +
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 585 TDRGLEPDIITYNTIICGYCS 605
           T RGL+P+I TY T++ GY +
Sbjct: 331 TKRGLKPEITTYGTLLQGYAT 351


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 269/565 (47%), Gaps = 44/565 (7%)

Query: 74  LLQSDMRD-VASHVFD-----KMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENY 122
           LL S +RD VA +V+      + +   G+      +  D +   GC      Y+ L+  +
Sbjct: 141 LLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAF 200

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--- 179
            R G++D +  +   M + G+  S      +++ L  +  +    K+   M  +G     
Sbjct: 201 CRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDG 260

Query: 180 -VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
             Y  L++G  + G +  A  +  ++ Q+G VP++VT   ++  +C  G +  A +L   
Sbjct: 261 VSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQ 320

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G + N  TF+ LI+ FC+   L+ A      M E  + P ++ Y++LI+G  K GR
Sbjct: 321 MRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGR 380

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + E  EL+     +G+K DVV +S+++  Y  IGD   A +   +ML  G +P+ I+YS 
Sbjct: 381 MDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSS 440

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI+GLC++ RL +AC LF ++L   L+P   TY++LIDG CK G ++   SL+D MIK+G
Sbjct: 441 LIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKG 500

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           + PD V  S+LI+GL       +A R  F+      +P+   +  LM  CCR       V
Sbjct: 501 VLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH-CCRTAEFKSVV 559

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
                               L++G + +G ++ A  ++  ML R    D   YS +IHG 
Sbjct: 560 -------------------ALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGH 600

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            +G NI   L   K + R G +P+      L+  L +E     A  +  +L +     D 
Sbjct: 601 CRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADA 660

Query: 594 ITYNTIICGYCSLNSCLIDGYFKSQ 618
            T   +I     LN     GYF++Q
Sbjct: 661 ETSKALI----DLNRKEGVGYFQAQ 681



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 217/415 (52%), Gaps = 31/415 (7%)

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF-DVLLLVGPKPN 247
           L    + +A  +   +++ G  PN+ T N +++ LC  GQ   A  +  D +   G  PN
Sbjct: 130 LSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPN 189

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           VVT++TL+ AFC+  +++ A +L  +M E  + P L+ ++ +++GL KAGR+++  ++  
Sbjct: 190 VVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFD 249

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
                GL  D V +++++  Y   G +  A+  +  M   G +P+V++++ LI  +C+ G
Sbjct: 250 EMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAG 309

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
            L  A  L GQ+  R L  +  T+++LIDGFC+                           
Sbjct: 310 NLERAVALVGQMRERGLRMNEFTFTALIDGFCR--------------------------- 342

Query: 428 LLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
              NG + DAL    +     + P++  +N L++G C+L R  +  +L   M    +KPD
Sbjct: 343 ---NGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPD 399

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           V+T++ ++ G    G   SA  L  +MLK+G+ PD ITYS++I GL + + +     +F+
Sbjct: 400 VVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFE 459

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            M + G+ PD   Y  L++   KE N+  AL L  ++  +G+ PD++TY+ +I G
Sbjct: 460 KMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDG 514



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL-FKGKNISVGLH 544
           P ++ +  ++  + S  SL SA  L   ML+ G+ P+V TY+ ++  L  +G+       
Sbjct: 118 PSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +   M   G AP++  YN L+    +   +DAA +L G + + G+ P ++T+NT++ G C
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 260/538 (48%), Gaps = 49/538 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL--MSCLVDSNSVGQYYKLCRA 172
           Y+ ++   V  G   ++ +++  M D+GIY  PD+      M     +       +L   
Sbjct: 114 YNAIMNILVEYGYFSQAHKVYMRMKDIGIY--PDVYTHTIRMKSFCITGRPTAALRLLNN 171

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G+G       Y  +++G  ++     A+H+  +++++G  P+I+T NK++  LC  G 
Sbjct: 172 MPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGN 231

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  +  LF  ++  G  PN+ TF+  I   C++  +++A +L   ++   L PD+I Y+ 
Sbjct: 232 VQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNT 291

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G  K  +L E    L   ++ G++ +   ++++++ +   G +  A +     +  G
Sbjct: 292 LICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F+P+  +YS LI GLC  G +  A  +F + + +  + S++ Y++L+ G  K G +    
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L  +M++ G  PD    +L++NGL     + DA      ++    IP++F FNTL+DG 
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGY 471

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+ +     +++   M  + I PDVIT+  L+ G+     L + +  F  ML++G TP++
Sbjct: 472 CKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI 531

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI------------------------- 558
           ITY+ +I    K + +S  + +FK M+  G+ PDI                         
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVT 591

Query: 559 -----------AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
                      AI+N+++N   ++ N+  A KLF ++      PD  TY  +I  YC 
Sbjct: 592 IEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 249/503 (49%), Gaps = 15/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++ +Y R GK+ E+V +F  M       S      +M+ LV+     Q +K+   MR
Sbjct: 79  YIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKV--YMR 136

Query: 175 GKGFCVYEFLMNGLLR------KGVIENAFHMHRQVIQRGFVPNIVT-CNKILKRLCING 227
            K   +Y  +    +R       G    A  +   +  +G   N V+ C  I      N 
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           QI  A  LFD +L  G  P+++TF+ LI+  CK+  ++++ +L++ +M+  + P+L  ++
Sbjct: 197 QI-EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I I GL + G + E   LL + +  GL  DV+ +++++  +     +  A     +M+N 
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PN  +Y+ +I G C+ G +  A  +    + +   P   TYSSLI+G C  G +   
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDG 462
            +++   +++G K   ++ + L+ GL        AL+     +     P+++ +N +++G
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C++   +D   +          PD+ T   LI G   Q ++  AI +   ML  G+TPD
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           VITY+ +++GL K + +   +  FK M   G  P+I  YN+L+    K+  +  A++LF 
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFK 555

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
           ++  RGL PDI+T  T+ICG CS
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCS 578



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 259/542 (47%), Gaps = 21/542 (3%)

Query: 81  DVASHVFD-KMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAY-- 137
           DV +H    K     G+     RL  +  G  GC+++ +    V  G   E+ +I AY  
Sbjct: 145 DVYTHTIRMKSFCITGRPTAALRLLNNMPGQ-GCEFNAVSYCAVISGFYKENCQIEAYHL 203

Query: 138 ---MSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGL 188
              M   GI   PD++   +L+  L    +V +  KL   +  +G C     +   + GL
Sbjct: 204 FDEMLKQGI--CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
            RKG I+ A  +   ++  G  P++++ N ++   C + ++  A      ++  G +PN 
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
            T++T+IN FCK   ++ A ++    M    +PD   YS LI+GL   G +     +   
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYE 381

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
           A+++G K  ++++++++      G V +A+Q    M+  G  P++ +Y++++ GLC+ G 
Sbjct: 382 AMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGC 441

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           L +A G+    + +   P + T+++LIDG+CK   +     + D M+  G+ PD +  + 
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           L+NGL     + + +  F   +     PN+  +N L++  C+ ++ ++ ++LF  M    
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDVITYSAIIHGLFKGKNISVG 542
           + PD++T   LI G+ S G L  A  LF  + K    +     ++ +I+   +  N+S+ 
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMA 621

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +F  M  +  APD   Y V+++   K  N+D A     +   +GL P   T   ++  
Sbjct: 622 EKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNC 681

Query: 603 YC 604
            C
Sbjct: 682 LC 683



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 257/544 (47%), Gaps = 32/544 (5%)

Query: 31  QFNQAN--AILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASH 85
           +FN  +  A+++   K N    A   F         P+I    +LIHVL +      +  
Sbjct: 178 EFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237

Query: 86  VFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           +F K V++ G   N F             ++  I+   R G IDE+  +   +   G  L
Sbjct: 238 LFSK-VMKRGVCPNLFT------------FNIFIQGLCRKGAIDEAARLLESIVSEG--L 282

Query: 146 SPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFH 199
           +PD++    L+      + + +       M   G    EF    ++NG  + G+++NA  
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           + R  + +GF+P+  T + ++  LC +G +  A ++F   +  G K +++ ++TL+    
Sbjct: 343 ILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLS 402

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K+  + +A QL   MME    PD+  Y+++++GL K G L + N +L  A+ +G   D+ 
Sbjct: 403 KQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIF 462

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            F++++D Y    ++ +A++  D ML+ G  P+VI+Y+ L+ GLC+  +L      F  +
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLM 434
           L +   P+++TY+ LI+ FCK  K+ +   L+  M  RGL PD V     +C L  NG +
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582

Query: 435 GDALRFFFQ-SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             A   F           +  IFN +++  C     +   KLF  MG  +  PD  T+ V
Sbjct: 583 DKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRV 642

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I      G++  A     + + +GL P   T   +++ L     +S  + +  LM +NG
Sbjct: 643 MIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702

Query: 554 VAPD 557
           + P+
Sbjct: 703 IVPE 706



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 216/431 (50%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  +M    RKG ++ A ++  ++      P++ + N I+  L   G    A  ++  +
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             +G  P+V T +  + +FC   +   A +L N M       + + Y  +I G +K    
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   L    L +G+  D++ F+ ++      G+V  + + + +++  G  PN+ +++I 
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+GLC++G + EA  L   ++   L P +++Y++LI GFCK  KL +       M+  G+
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +P+    + +IN     G+M +A +    ++    IP+ F +++L++G C        + 
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F        K  +I +  L++G++ QG +  A+ L   M++ G +PD+ TY+ +++GL 
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +S    +       G  PDI  +N L++   K+ N+D A+++   +   G+ PD+I
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 595 TYNTIICGYCS 605
           TYNT++ G C 
Sbjct: 498 TYNTLLNGLCK 508



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 209/430 (48%), Gaps = 18/430 (4%)

Query: 196 NAFHMHRQV-IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT---- 250
           NA  M  QV  + GF   + T   ++++L ++G+     ++ DVL  +  + NV +    
Sbjct: 22  NALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKF---EAMEDVLAEM--RKNVDSKMLE 76

Query: 251 --FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
             +  ++  + ++ K+++A  ++  M   D  P +  Y+ +++ L + G   + +++ + 
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
             D G+  DV   +  M ++   G    A++  + M   G   N +SY  +I G  ++  
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
            +EA  LF ++L + + P +LT++ LI   CK G +++   L+  ++KRG+ P+    ++
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
            I GL     + +A R     V   L P++  +NTL+ G C+  +  +       M    
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           ++P+  T+  +I G    G + +A  +    + +G  PD  TYS++I+GL    +++  +
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +F      G    I +YN L+  L K+  +  AL+L   + + G  PDI TYN ++ G 
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 604 CSLNSCLIDG 613
           C +  CL D 
Sbjct: 437 CKM-GCLSDA 445



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 16/291 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ LI+ Y +   +D+++EI   M   GI  +PD++    L++ L  +  +       +A
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGI--TPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  L+    +   +  A  + +++  RG  P+IVT   ++  LC NG+
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 229 IGNASSLFDVLLLVGPKPNVVT--FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           +  A  LF V +    K +  T  F+ +INAFC++  +  A +L++ M   D  PD   Y
Sbjct: 582 LDKAYELF-VTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTY 640

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            ++ID   K G +   +  LL  + +GL         V++       +  AV   + M+ 
Sbjct: 641 RVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQ 700

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            G +P  ++ SI         + V A  +  + L+++   +  +Y  L DG
Sbjct: 701 NGIVPEEVN-SIFE----ADKKEVAAPKIVVEYLLKKSHITYYSYELLYDG 746


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 278/606 (45%), Gaps = 67/606 (11%)

Query: 7   NLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPN 66
           NL T    I  C C+       DL F    A L N+IK      AI F         +P 
Sbjct: 90  NLCTYGILIGSCCCAGRL----DLGF----AALGNVIKKGFRVDAIAF---------TPL 132

Query: 67  IAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIG 126
           +  L      SD  D+   V  +M  Q G   N F             Y+ L++      
Sbjct: 133 LKGLCADKRTSDAMDI---VLRRMT-QLGCIPNVF------------SYNILLKGLCDEN 176

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMN 186
           +  E++E+   M D G    PD+V                              Y  ++N
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVS-----------------------------YTTVIN 207

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           G  ++G ++ A+  + +++ RG +PN+VT + I+  LC    +  A  +   ++  G  P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           N  T++++++ +C   + ++A      M    + PD++ Y+ L+D L K GR  E  ++ 
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
            +   RGLK ++  + +++  Y   G +       D M+  G  PN   +SILI    +Q
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G++ +A  +F ++  + L P  +TY ++I   CKSG++ D    ++ MI   L P  +V 
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + LI+ L        A     + +   +  +   FN+++D  C+  R  ++ KLF LM  
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             +KPD+IT++ LI G    G +  A  L   M+  G+ PD +TY+ +I+G  K   +  
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L +F+ ME +GV+PDI  YN++L  L +     AA +L+  +T+ G + ++ TYN I+ 
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 602 GYCSLN 607
           G C  N
Sbjct: 628 GLCKNN 633



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 235/495 (47%), Gaps = 52/495 (10%)

Query: 162 SVGQYYKLCRAMRGK---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           +V +Y ++ RA   +     C Y  L+      G ++  F     VI++GF  + +    
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 219 ILKRLCINGQIGNASSLFDVLL----LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           +LK LC + +  +A    D++L     +G  PNV +++ L+   C E + ++A +L  +M
Sbjct: 132 LLKGLCADKRTSDA---MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM 188

Query: 275 ME--MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            +   D  PD++ Y+ +I+G FK G L +        LDRG+  +VV +SS++ A     
Sbjct: 189 PDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ 248

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
            + +A++    M+  G +PN  +Y+ ++ G C  G+  EA G   ++    +EP ++TY+
Sbjct: 249 AMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYN 308

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQS-----VRM 447
           SL+D  CK+G+  +   ++D+M KRGLKP+      L+ G                 VR 
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 368

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            + PN ++F+ L+    +  +    + +F  M    + PD +T+  +I  +   G +  A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLF------KGKNISVGL------------------ 543
           +  F QM+   L+P  I Y+++IH L       K K + + +                  
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDS 488

Query: 544 -----------HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
                       +F LM R GV PDI  Y+ L++       +D A KL   +   G++PD
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548

Query: 593 IITYNTIICGYCSLN 607
            +TYNT+I GYC ++
Sbjct: 549 CVTYNTLINGYCKIS 563



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 227/482 (47%), Gaps = 29/482 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y   G+  E++     M   G+   PD+V    LM  L  +    +  K+  +
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGV--EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  PN    + ++      G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  P+ VT+ T+I   CK  ++E A + +  M++  L P  I+Y+ 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L    +  +  EL+L  LDRG+ LD + F+S++D++   G V  + + +D M+  G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++I+YS LI G C  G++ EA  L   ++   ++P  +TY++LI+G+CK  ++ D  
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI------------- 455
            L+  M   G+ PD +  ++++ GL        FQ+ R      L++             
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGL--------FQTRRTAAAKELYVGITESGTQLELST 621

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G C+     + +++F  + + +++ +  T  ++I  +   G    A  LF  + 
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             GL PDV TYS +   L +   +     +F  ME NG   +  + N ++  L++  ++ 
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 741

Query: 576 AA 577
            A
Sbjct: 742 RA 743



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 191/387 (49%), Gaps = 16/387 (4%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---DLVPDLIIYS 287
           +A  +FD LL  G   ++   +  +    + +    A   YN M      ++ P+L  Y 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLN 346
           ILI     AGRL  G   L   + +G ++D + F+ ++           A+     RM  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR---RLEPSLLTYSSLIDGFCKSGK 403
            G +PNV SY+IL+KGLC + R  EA  L  Q++        P +++Y+++I+GF K G 
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           L   +  Y  M+ RG+ P+ V  S +I  L     M  A+      V+  ++PN   +N+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C   +  + +     M    ++PDV+T+  L+  +   G  + A  +F  M KRG
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           L P++ TY  ++ G +  K   V +H +  LM RNG+ P+  ++++L+    K+  +D A
Sbjct: 335 LKPEITTYGTLLQG-YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
           + +F ++  +GL PD +TY T+I   C
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILC 420



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 126/237 (53%), Gaps = 12/237 (5%)

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            + P+L TY  LI   C +G+L  GF+   N+IK+G + DA+  + L+ GL       DA
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 438 LRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVITHT 492
           +    +  RMT    IPN+F +N L+ G C   R+ + ++L  +M     +  PDV+++T
Sbjct: 146 MDIVLR--RMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            +I G   +G L  A   + +ML RG+ P+V+TYS+II  L K + +   + +   M +N
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           GV P+   YN +++          A+    ++   G+EPD++TYN+++   C    C
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC 320


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 229/425 (53%), Gaps = 5/425 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N   +   ++  F +  ++I+ G    IVT N ++  LC  G+ G A  LFD ++  G
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +P+V T++T+IN  CK  +   A  L+  M E    PD++ YS +ID L K  R+ E  
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           ++      +G+  ++  ++S++           A    + M++   +PN++++S+LI   
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G + EA G+   +    +EP+++TYSSL++G+    ++ +   L+D MI +G KPD 
Sbjct: 343 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDV 402

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              ++LING      +G+A + F + +   L P++  +NTL+DG C+L R  +   LF  
Sbjct: 403 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 462

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      PD+ T+++L+ G   QG L+ A  LF  M    L P+++ Y+ +I  + K +N
Sbjct: 463 MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRN 522

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F  +   G+ P++ IY  ++N L KE  LD AL+ F  + + G  P+  +YN 
Sbjct: 523 LKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV 582

Query: 599 IICGY 603
           II G+
Sbjct: 583 IIRGF 587



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 240/451 (53%), Gaps = 9/451 (1%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI  + ++ ++D    + A +  +G+ L+      L++ L      GQ  +L   M  +G
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
           +      Y  ++NGL + G    A  + R++ + G  P++VT + I+  LC + ++  A 
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            +F  +   G  PN+ T+++LI   C  ++  +A  + N MM ++++P+++ +S+LI+  
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G + E   +L T  + G++ +VV +SS+M+ Y    +V  A + +D M+  G  P+V
Sbjct: 343 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDV 402

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            SY+ILI G C+  R+ EA  LF +++ + L P +++Y++LIDG C+ G+LR+   L+ N
Sbjct: 403 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 462

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M+  G  PD    S+L++G      +  A R F       L PN+ ++N L+D  C+ + 
Sbjct: 463 MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRN 522

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +  KLF  + +  ++P+V  +T +I G+  +G L  A+  F  M + G  P+  +Y+ 
Sbjct: 523 LKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV 582

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
           II G  + K+ S  + +   M   G   D+A
Sbjct: 583 IIRGFLQHKDESRAVQLIGEMREKGFVADVA 613



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 201/382 (52%), Gaps = 6/382 (1%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM-DLVPDLIIYS 287
           I +A + F+ +L   P+P ++ F+ L++A  K      A    +  ME+  L PD     
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           +LI+  F+  R+  G  +L   +  GL+L +V F+++++    +G  G+AV+ +D M+  
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G+ P+V +Y+ +I GLC+ G  V A GLF ++     +P ++TYS++ID  CK  ++ + 
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDG 462
             ++  M  +G+ P+    + LI GL       +A     + + + ++PN+  F+ L++ 
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+     +   +   M    ++P+V+T++ L+ G + Q  +  A  LF  M+ +G  PD
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V +Y+ +I+G  K K I     +F  M   G+ PDI  YN L++ L +   L  A  LF 
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
            +   G  PD+ TY+ ++ G+C
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFC 483



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 212/439 (48%), Gaps = 69/439 (15%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G+T     LFR  +G+ GC      YS +I++  +  +++E+++IF+YM   GI  SP
Sbjct: 239 KIGETVAAAGLFR-KMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGI--SP 295

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           ++                               Y  L+ GL        A  M  +++  
Sbjct: 296 NIF-----------------------------TYNSLIQGLCNFSRWREASAMLNEMMSL 326

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
             +PNIVT + ++   C  G +  A  +   +  +G +PNVVT+S+L+N +  +A++ +A
Sbjct: 327 NIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEA 386

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +L+++M+     PD+  Y+ILI+G  KA R+ E  +L    + +GL  D+V +++++D 
Sbjct: 387 RKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDG 446

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
              +G +  A   +  ML  G LP++ +YSIL+ G C+QG L +A  LF  +    L+P+
Sbjct: 447 LCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPN 506

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
           ++ Y+ LID  CKS  L++   L+  +  +GL+P+  + + +INGL  + L         
Sbjct: 507 MVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGL--------- 557

Query: 448 TLIPNLFIF-NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
            L   L  F N   DGC                      P+  ++ V+IRG       S 
Sbjct: 558 -LDEALEAFRNMEEDGC---------------------PPNEFSYNVIIRGFLQHKDESR 595

Query: 507 AILLFFQMLKRGLTPDVIT 525
           A+ L  +M ++G   DV T
Sbjct: 596 AVQLIGEMREKGFVADVAT 614



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 31/238 (13%)

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG-FSLYDNMIKRGLKPDAVVCSLL 429
           +A   F  +L R+  P ++ ++ L+    K     D   SL   M   GL PD     +L
Sbjct: 104 DALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHML 163

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
           IN         FFQ  R+ L      F+ L             +KL        ++  ++
Sbjct: 164 INC--------FFQLQRVDLG-----FSVL----------AKIIKL-------GLQLTIV 193

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T   LI G+   G    A+ LF  M+ RG  PDV TY+ II+GL K         +F+ M
Sbjct: 194 TFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKM 253

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
              G  PD+  Y+ +++ L K+  ++ AL +F  +  +G+ P+I TYN++I G C+ +
Sbjct: 254 GEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFS 311


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 234/416 (56%), Gaps = 5/416 (1%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           I+ A  +  +  + G   N V+CN +L  LC  G++  A +L   +   G  P+VV++  
Sbjct: 223 IKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGV 282

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +++ +C+  +L+K  +L + +    L PD  IY+ +I  L K G + E  +LL      G
Sbjct: 283 VVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWG 342

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  D VV+++V+  +  +G+V  A + +D M     +P++++Y+ +I G+C+ G++VEA 
Sbjct: 343 VFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAR 402

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +F ++L++ LEP  +TY++LIDG+CK+G++++ FS+++ M+++GL P+ V  + L +GL
Sbjct: 403 EMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGL 462

Query: 434 MGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
             +     A     +  R  L PN++ +NT+++G C++     TVKL   M +    PD 
Sbjct: 463 CKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDT 522

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           IT+T L+      G ++ A  L   ML + L P ++T++ +++G      +  G  + + 
Sbjct: 523 ITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEW 582

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M   G+ P+   +N L+     + N+ A  +++  + DRG+ PD  TYN +I G+C
Sbjct: 583 MLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHC 638



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 243/461 (52%), Gaps = 34/461 (7%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----C 179
           RIG++D+ +++   +   G+     +   ++  L  +  V +  +L R MR  G      
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  +++G  + G +  A  +  ++ ++  VP+IVT   ++  +C +G++  A  +F+ +
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L+ G +P+ VT++ LI+ +CK  ++++AF ++N M++  L P+++ Y+ L DGL K G +
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEI 468

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
              NELL     +GL+ +V  ++++++    IG++ + V+  + M   GF P+ I+Y+ L
Sbjct: 469 DVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +   C+ G + +A  L   +L +RL+P+L+T++ L++GFC SG L DG  L + M+++G+
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGI 588

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
            P+A                                FN+LM   C       T +++  M
Sbjct: 589 MPNATT------------------------------FNSLMKQYCIKNNMRATTEIYKAM 618

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               + PD  T+ +LI+G     ++  A  L  +M+++G +    TY A+I G +K K  
Sbjct: 619 HDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKF 678

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
                +F+ M ++G+  +  IY++ +++  +E N +  L+L
Sbjct: 679 VEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLEL 719



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 229/474 (48%), Gaps = 11/474 (2%)

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMN 186
           +V++F    ++G+  +      ++ CL     V + + L   M  +G       Y  +++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           G  R G ++    +  ++  +G  P+    N I+  LC NG++  A  L   +   G  P
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           + V ++T+I+ FCK   +  A +L++ M    +VPD++ Y+ +I G+ K+G++ E  E+ 
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              L +GL+ D V +++++D Y   G++  A   +++M+  G  PNV++Y+ L  GLC+ 
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G +  A  L  ++  + L+P++ TY+++++G CK G +     L + M   G  PD +  
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525

Query: 427 SLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + L++     G M  A       +   L P L  FN LM+G C      D  +L   M  
Sbjct: 526 TTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             I P+  T   L++    + ++ +   ++  M  RG+ PD  TY+ +I G  K +N+  
Sbjct: 586 KGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKE 645

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL--EPDI 593
              + K M   G +   A Y+ L+    K      A KLF ++   GL  E DI
Sbjct: 646 AWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDI 699



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 221/440 (50%), Gaps = 6/440 (1%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ-IGNAS 233
           G    V++     L+  G +  A  +  ++++ G V ++ +CN  L RL  N + I  A 
Sbjct: 168 GSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAV 227

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            +F+    +G   N V+ + +++  C+  K+ +A  L   M +    PD++ Y +++ G 
Sbjct: 228 KVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGY 287

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G L +  +L+     +GLK D  ++++++      G+V  A Q    M   G  P+ 
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           + Y+ +I G C+ G +  AC LF ++  +++ P ++TY+S+I G CKSGK+ +   +++ 
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M+ +GL+PD V  + LI+G      M +A     Q V+  L PN+  +  L DG C+   
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                +L   M    ++P+V T+  ++ G+   G++   + L  +M   G  PD ITY+ 
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++    K   ++    + ++M    + P +  +NVL+N       L+   +L   + ++G
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587

Query: 589 LEPDIITYNTIICGYCSLNS 608
           + P+  T+N+++  YC  N+
Sbjct: 588 IMPNATTFNSLMKQYCIKNN 607



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 206/425 (48%), Gaps = 36/425 (8%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           N F+  +   Q+ F P        L+ LCI   +  AS+            ++ T   L+
Sbjct: 98  NLFNWAKSQSQQQFHPT-------LESLCIVVHLSVASN------------DIQTAKRLV 138

Query: 256 NAFCKEAKLE--KAFQLYNLMM---EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
             FC + K++  K+F L+  M+     D     +++ +    L + G + E  +L    L
Sbjct: 139 FEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLL 198

Query: 311 DRGLKLDV----VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
             G+ + V    +  S +   + GI     AV+ ++     G   N +S +I++  LCQ 
Sbjct: 199 RYGVVVSVDSCNLFLSRLSCNFEGIKI---AVKVFEEFPELGVCWNTVSCNIVLHCLCQL 255

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G++ EA  L  Q+  R   P +++Y  ++ G+C+ G+L     L D +  +GLKPD  + 
Sbjct: 256 GKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIY 315

Query: 427 SLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + +I     NG + +A +      +  + P+  ++ T++ G C+L   +   KLF  M  
Sbjct: 316 NNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRR 375

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             I PD++T+T +I GI   G +  A  +F +ML +GL PD +TY+A+I G  K   +  
Sbjct: 376 KKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKE 435

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
              +   M + G+ P++  Y  L + L K   +D A +L  +++ +GL+P++ TYNTI+ 
Sbjct: 436 AFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVN 495

Query: 602 GYCSL 606
           G C +
Sbjct: 496 GLCKI 500



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/405 (22%), Positives = 168/405 (41%), Gaps = 59/405 (14%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
             +++   K  N + A + F         P+I     +IH + +S     A  +F++M++
Sbjct: 351 TTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLV 410

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ- 151
           +              L      Y+ LI+ Y + G++ E+  +   M   G  L+P++V  
Sbjct: 411 K-------------GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG--LTPNVVTY 455

Query: 152 -RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L   L  +  +    +L   M  KG       Y  ++NGL + G IE    +  ++  
Sbjct: 456 TALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDL 515

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            GF P+ +T   ++   C  G++  A  L  ++L    +P +VTF+ L+N FC    LE 
Sbjct: 516 AGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLED 575

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
             +L   M+E  ++P                                   +   F+S+M 
Sbjct: 576 GERLIEWMLEKGIMP-----------------------------------NATTFNSLMK 600

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y    ++    + Y  M + G +P+  +Y+ILIKG C+   + EA  L  +++ +    
Sbjct: 601 QYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSV 660

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           +  TY +LI GF K  K  +   L++ M K GL  +  +  + ++
Sbjct: 661 TAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 263/540 (48%), Gaps = 53/540 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ---RLMS-CLVDSNSVGQYYKLC 170
           Y+ ++   V  G   ++ +++  M D+GIY  PD+     R+ S C+    +     +L 
Sbjct: 114 YNAIMNILVEYGYFSQAHKVYMRMKDIGIY--PDVYTHTIRMKSFCITGRPTAA--LRLL 169

Query: 171 RAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M G+G       Y  +++G  ++     A+H+  +++++G  P+I+T NK++  LC  
Sbjct: 170 NNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKK 229

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  +  LF  ++  G  PN+ TF+  I   C++  +++A +L   ++   L PD+I Y
Sbjct: 230 GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISY 289

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LI G  K  +L E    L   ++ G++ +   ++++++ +   G +  A +     + 
Sbjct: 290 NTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMF 349

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            GF+P+  +YS LI GLC  G +  A  +F + + +  + S++ Y++L+ G  K G +  
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQ 409

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              L  +M++ G  PD    +L++NGL     + DA      ++    IP++F FNTL+D
Sbjct: 410 ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+ +     +++   M  + I PDVIT+  L+ G+     L + +  F  ML++G TP
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI----------------------- 558
           ++ITY+ +I    K + +S  + +FK M+  G+ PDI                       
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589

Query: 559 -------------AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
                        AI+N+++N    + N+  A KLF ++      PD  TY  +I  YC 
Sbjct: 590 VTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 249/503 (49%), Gaps = 15/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++ +Y R GK+ E+V +F  M       S      +M+ LV+     Q +K+   MR
Sbjct: 79  YIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKV--YMR 136

Query: 175 GKGFCVYEFLMNGLLR------KGVIENAFHMHRQVIQRGFVPNIVT-CNKILKRLCING 227
            K   +Y  +    +R       G    A  +   +  +G   N V+ C  I      N 
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           QI  A  LFD +L  G  P+++TF+ LI+  CK+  ++++ +L++ +M+  + P+L  ++
Sbjct: 197 QI-EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I I GL + G + E   LL + +  GL  DV+ +++++  +     +  A     +M+N 
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PN  +Y+ +I G C+ G +  A  +    + +   P   TYSSLI+G C  G +   
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDG 462
            +++   +++G K   ++ + L+ GL        AL+     +     P+++ +N +++G
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C++   +D   +          PD+ T   LI G   Q ++  AI +   ML  G+TPD
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           VITY+ +++GL K + +   +  FK M   G  P+I  YN+L+    K+  +  A++LF 
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFK 555

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
           ++  RGL PDI+T  T+ICG CS
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCS 578



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 258/542 (47%), Gaps = 21/542 (3%)

Query: 81  DVASHVFD-KMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAY-- 137
           DV +H    K     G+     RL  +  G  GC+++ +    V  G   E+ +I AY  
Sbjct: 145 DVYTHTIRMKSFCITGRPTAALRLLNNMPGQ-GCEFNAVSYCAVISGFYKENCQIEAYHL 203

Query: 138 ---MSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGL 188
              M   GI   PD++   +L+  L    +V +  KL   +  +G C     +   + GL
Sbjct: 204 FDEMLKQGI--CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
            RKG I+ A  +   ++  G  P++++ N ++   C + ++  A      ++  G +PN 
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
            T++T+IN FCK   ++ A ++    M    +PD   YS LI+GL   G +     +   
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYE 381

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
           A+++G K  ++++++++      G V +A+Q    M+  G  P++ +Y++++ GLC+ G 
Sbjct: 382 AMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGC 441

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           L +A G+    + +   P + T+++LIDG+CK   +     + D M+  G+ PD +  + 
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           L+NGL     + + +  F   +     PN+  +N L++  C+ ++ ++ ++LF  M    
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDVITYSAIIHGLFKGKNISVG 542
           + PD++T   LI G+ S G L  A  LF  + K    +     ++ +I+      N+S+ 
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMA 621

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +F  M  +  APD   Y V+++   K  N+D A     +   +GL P   T   ++  
Sbjct: 622 EKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNC 681

Query: 603 YC 604
            C
Sbjct: 682 LC 683



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 257/544 (47%), Gaps = 32/544 (5%)

Query: 31  QFNQAN--AILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASH 85
           +FN  +  A+++   K N    A   F         P+I    +LIHVL +      +  
Sbjct: 178 EFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237

Query: 86  VFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           +F K V++ G   N F             ++  I+   R G IDE+  +   +   G  L
Sbjct: 238 LFSK-VMKRGVCPNLFT------------FNIFIQGLCRKGAIDEAARLLESIVSEG--L 282

Query: 146 SPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFH 199
           +PD++    L+      + + +       M   G    EF    ++NG  + G+++NA  
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           + R  + +GF+P+  T + ++  LC +G +  A ++F   +  G K +++ ++TL+    
Sbjct: 343 ILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLS 402

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K+  + +A QL   MME    PD+  Y+++++GL K G L + N +L  A+ +G   D+ 
Sbjct: 403 KQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIF 462

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            F++++D Y    ++ +A++  D ML+ G  P+VI+Y+ L+ GLC+  +L      F  +
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLM 434
           L +   P+++TY+ LI+ FCK  K+ +   L+  M  RGL PD V     +C L  NG +
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582

Query: 435 GDALRFFFQ-SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             A   F           +  IFN +++  C     +   KLF  MG  +  PD  T+ V
Sbjct: 583 DKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRV 642

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I      G++  A     + + +GL P   T   +++ L     +S  + +  LM +NG
Sbjct: 643 MIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702

Query: 554 VAPD 557
           + P+
Sbjct: 703 IVPE 706



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 216/431 (50%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  +M    RKG ++ A ++  ++      P++ + N I+  L   G    A  ++  +
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             +G  P+V T +  + +FC   +   A +L N M       + + Y  +I G +K    
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   L    L +G+  D++ F+ ++      G+V  + + + +++  G  PN+ +++I 
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+GLC++G + EA  L   ++   L P +++Y++LI GFCK  KL +       M+  G+
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +P+    + +IN     G+M +A +    ++    IP+ F +++L++G C        + 
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F        K  +I +  L++G++ QG +  A+ L   M++ G +PD+ TY+ +++GL 
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +S    +       G  PDI  +N L++   K+ N+D A+++   +   G+ PD+I
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 595 TYNTIICGYCS 605
           TYNT++ G C 
Sbjct: 498 TYNTLLNGLCK 508



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 209/430 (48%), Gaps = 18/430 (4%)

Query: 196 NAFHMHRQV-IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT---- 250
           NA  M  QV  + GF   + T   ++++L ++G+     ++ DVL  +  + NV +    
Sbjct: 22  NALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKF---EAMEDVLAEM--RKNVDSKMLE 76

Query: 251 --FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
             +  ++  + ++ K+++A  ++  M   D  P +  Y+ +++ L + G   + +++ + 
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
             D G+  DV   +  M ++   G    A++  + M   G   N +SY  +I G  ++  
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
            +EA  LF ++L + + P +LT++ LI   CK G +++   L+  ++KRG+ P+    ++
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
            I GL     + +A R     V   L P++  +NTL+ G C+  +  +       M    
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           ++P+  T+  +I G    G + +A  +    + +G  PD  TYS++I+GL    +++  +
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +F      G    I +YN L+  L K+  +  AL+L   + + G  PDI TYN ++ G 
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 604 CSLNSCLIDG 613
           C +  CL D 
Sbjct: 437 CKM-GCLSDA 445



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 131/291 (45%), Gaps = 16/291 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ LI+ Y +   +D+++EI   M   GI  +PD++    L++ L  +  +       +A
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGI--TPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  L+    +   +  A  + +++  RG  P+IVT   ++  LC NG+
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 229 IGNASSLFDVLLLVGPKPNVVT--FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           +  A  LF V +    K +  T  F+ +INAFC +  +  A +L++ M   D  PD   Y
Sbjct: 582 LDKAYELF-VTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTY 640

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            ++ID   K G +   +  LL  + +GL         V++       +  AV   + M+ 
Sbjct: 641 RVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQ 700

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            G +P  ++ SI         + V A  +  + L+++   +  +Y  L DG
Sbjct: 701 NGIVPEEVN-SIFE----ADKKEVAAPKIVVEYLLKKSHITYYSYELLYDG 746


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/568 (25%), Positives = 277/568 (48%), Gaps = 45/568 (7%)

Query: 52  IQFFKWTHNCVSS--PNIAQLIHVLLQSDMRDVA----SHVFDKMVIQFGKTY-NFFRLF 104
           + FF W  +   S   ++  +IH+ + S    VA    S  +++  +    ++  FF L 
Sbjct: 105 LDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLL 164

Query: 105 RDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
             +  D+G D   +    +  V  G + E+  +F  M + G+ LS D      SC V   
Sbjct: 165 VYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVD------SCNV--- 215

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
            + +  K C                          A  + R+  + G   N+ + N ++ 
Sbjct: 216 YLTRLSKDCYK---------------------TATAIIVFREFPEVGVCWNVASYNIVIH 254

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            +C  G+I  A  L  ++ L G  P+V+++ST++N +C+  +L+K ++L  +M    L P
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 314

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +  IY  +I  L +  +L E  E     + +G+  D VV+++++D +   GD+  A + +
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             M +    P+V++Y+ +I G CQ G +VEA  LF ++  + LEP  +T++ LI+G+CK+
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G ++D F ++++MI+ G  P+ V  + LI+GL     +  A     +  ++ L PN+F +
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N++++G C+     + VKL        +  D +T+T L+      G +  A  +  +ML 
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL P ++T++ +++G      +  G  +   M   G+AP+   +N L+       NL A
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A  ++  +  RG+ PD  TY  ++ G+C
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLVKGHC 642



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 204/417 (48%), Gaps = 5/417 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++NG  R G ++  + +   + ++G  PN      I+  LC   ++  A   F  ++
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+ V ++TLI+ FCK   +  A + +  M   D+ PD++ Y+ +I G  + G + 
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  +L      +GL+ D V F+ +++ Y   G +  A + ++ M+  G  PNV++Y+ LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC++G L  A  L  ++    L+P++ TY+S+++G CKSG + +   L       GL 
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523

Query: 421 PDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            D V  + L++     G M  A     + +   L P +  FN LM+G C      D  KL
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M    I P+  T   L++    + +L +A  ++  M  RG+ PD  TY  ++ G  K
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
            +N+     +F+ M+  G +  ++ Y+VL+   +K      A ++F Q+   GL  D
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 217/435 (49%), Gaps = 6/435 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING-QIGNASSLFDV 238
           V++     L+  G++  A  +  +++  G V ++ +CN  L RL  +  +   A  +F  
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
              VG   NV +++ +I+  C+  ++++A  L  LM      PD+I YS +++G  + G 
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L +  +L+     +GLK +  ++ S++     I  +  A + +  M+  G LP+ + Y+ 
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI G C++G +  A   F ++  R + P +LTY+++I GFC+ G + +   L+  M  +G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           L+PD+V  + LING      M DA R     ++    PN+  + TL+DG C+        
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +L   M    ++P++ T+  ++ G+   G++  A+ L  +    GL  D +TY+ ++   
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K   +     + K M   G+ P I  +NVL+N       L+   KL   +  +G+ P+ 
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596

Query: 594 ITYNTIICGYCSLNS 608
            T+N+++  YC  N+
Sbjct: 597 TTFNSLVKQYCIRNN 611



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 211/452 (46%), Gaps = 34/452 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS ++  Y R G++D+  ++   M   G+  +  +   ++  L     + +  +    M 
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G      VY  L++G  ++G I  A     ++  R   P+++T   I+   C  G + 
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF  +   G +P+ VTF+ LIN +CK   ++ AF+++N M++    P+++ Y+ LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K G L   NELL      GL+ ++  ++S+++     G++  AV+        G  
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            + ++Y+ L+   C+ G + +A  +  ++L + L+P+++T++ L++GFC  G L DG  L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            + M+ +G+ P+A                                FN+L+   C      
Sbjct: 584 LNWMLAKGIAPNATT------------------------------FNSLVKQYCIRNNLK 613

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
               ++  M    + PD  T+  L++G     ++  A  LF +M  +G +  V TYS +I
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            G  K K       +F  M R G+A D  I++
Sbjct: 674 KGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 6/218 (2%)

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD------ALRFFFQSVRMTLIPNLFI 455
           G LR+   +++ M+  GL      C++ +  L  D      A+  F +   + +  N+  
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++   C+L R  +   L +LM +    PDVI+++ ++ G    G L     L   M 
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           ++GL P+   Y +II  L +   ++     F  M R G+ PD  +Y  L++   K  ++ 
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
           AA K F ++  R + PD++TY  II G+C +   +  G
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 155/595 (26%), Positives = 280/595 (47%), Gaps = 49/595 (8%)

Query: 51  AIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGD 110
           A++ F    +C + P   +  + LL    R   S   +++V  F +     R     +  
Sbjct: 33  ALKLFDELLHC-ARPASVRAFNQLLTVVSRAGCSSASERVVSLFTR---MARECSSKVAP 88

Query: 111 FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC 170
             C YS LI  + R+G+++     F  +   G  ++  ++ +L+  L D+  V +   + 
Sbjct: 89  NACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDIL 148

Query: 171 RAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
                +  C      Y  ++NG  R+G +E A+++  +++ +G  PN+VT   ++  LC 
Sbjct: 149 LLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCK 208

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
              +  A  +F  ++  G KP+  T++ LI+ +    K ++  Q+   M    L PD I 
Sbjct: 209 AQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCIT 268

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD------------ 333
           Y++L+D L K GR +E      +   +G+K DV +++ ++  Y   G             
Sbjct: 269 YALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMV 328

Query: 334 -----------------------VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
                                  +  A+  +++M   G  P+V+S+  LI  LC+ GR+ 
Sbjct: 329 GNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVD 388

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV-----V 425
           +A   F Q++   + P++  +SSL+ G C  GK      L+  ++ +G+  DAV     +
Sbjct: 389 DAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLM 448

Query: 426 CSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           C+L   G + +A R     +R+ + PN+  +NTL+ G C   R  +  KL  +M    +K
Sbjct: 449 CNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLK 508

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P+  T+T+L+RG      +  A  LF +ML +G+TP V TY+ I+HGLF+    S    +
Sbjct: 509 PNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +  M  +    DI  YN++LN L K   +D A K+F +L  +  + D +T+N +I
Sbjct: 569 YLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMI 623



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 224/446 (50%), Gaps = 12/446 (2%)

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           + C +      C Y  L+    R G +E+ F     +++ G+  N++  +++LK LC   
Sbjct: 80  RECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAK 139

Query: 228 QIGNASSLFDVLLL----VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           ++  A+   D+LLL     G  P+VV ++T+IN F +E ++EKA+ L+  MM+  + P++
Sbjct: 140 RVDEAT---DILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNV 196

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + Y+ +IDGL KA  +     +    +DRG+K D   ++ ++  Y+  G     VQ  + 
Sbjct: 197 VTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEE 256

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M   G  P+ I+Y++L+  LC+ GR  EA   F  +  + ++P +  Y+ L+ G+   G 
Sbjct: 257 MSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGA 316

Query: 404 LRDGFSLYDNMIKRGLKPDAVV-----CSLLINGLMGDALRFFFQSVRMTLIPNLFIFNT 458
           L +  S  D M+  G+ P+  +     C+     ++ +A+  F +  +  L P++  F  
Sbjct: 317 LSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGA 376

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+D  C+L R  D V  F  M    + P++   + L+ G+ + G    A  LFF++L +G
Sbjct: 377 LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           +  D + ++ ++  L     +     +  LM R GV P++  YN L+        +D A 
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAA 496

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYC 604
           KL   +   GL+P+  TY  ++ GYC
Sbjct: 497 KLLDVMVSNGLKPNEFTYTILLRGYC 522



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 258/553 (46%), Gaps = 29/553 (5%)

Query: 65  PNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           PN+     +I  L ++ + D A  VF +M+ +  K  N         G + C    LI  
Sbjct: 194 PNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDN---------GTYNC----LIHG 240

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGF- 178
           Y+  GK  E V++   MS  G  L PD +    L+  L  +    +      +M  KG  
Sbjct: 241 YLSTGKWKEVVQMLEEMSTHG--LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIK 298

Query: 179 ---CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
               +Y  L++G   KG +         ++  G  PN    N +         I  A  +
Sbjct: 299 PDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHI 358

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F+ +   G  P+VV+F  LI+A CK  +++ A   +N M+   + P++ ++S L+ GL  
Sbjct: 359 FNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCT 418

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G+ ++  EL    LD+G+ +D V F+++M      G V  A +  D M+  G  PNVIS
Sbjct: 419 VGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVIS 478

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ L+ G C  GR+ EA  L   ++   L+P+  TY+ L+ G+CK+ ++ D +SL+  M+
Sbjct: 479 YNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREML 538

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            +G+ P     + +++GL       +A   +   +      +++ +N +++G C+     
Sbjct: 539 MKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVD 598

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  K+F  +   + + D +T  ++I  +   G    A+ LF  +   GL PDV+TY  I 
Sbjct: 599 EAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIA 658

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
             L +  ++     +F  ME++G AP+  + N L+  L+   ++  A     +L ++   
Sbjct: 659 ENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFS 718

Query: 591 PDIITYNTIICGY 603
            +  T + +I  Y
Sbjct: 719 LEASTTSMLISLY 731



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 155/311 (49%), Gaps = 17/311 (5%)

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
            A DR L+L+ V+ S      +G+ +   A++ +D +L+     +V +++ L+  + + G
Sbjct: 7   AAADRCLELERVIASRARSGSLGLDE---ALKLFDELLHCARPASVRAFNQLLTVVSRAG 63

Query: 368 ------RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
                 R+V       +    ++ P+  TYS LI  FC+ G+L  GF+ +  ++K G + 
Sbjct: 64  CSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRV 123

Query: 422 DAVVCSLLINGLMGDALRFFFQS----VRMTLI---PNLFIFNTLMDGCCRLKRATDTVK 474
           + +V S L+ GL  DA R    +    +RM+     P++  +NT+++G  R  +      
Sbjct: 124 NVIVISQLLKGLC-DAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYN 182

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF+ M    I P+V+T+T +I G+     +  A  +F QM+ RG+ PD  TY+ +IHG  
Sbjct: 183 LFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYL 242

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
                   + M + M  +G+ PD   Y +LL+ L K      A   F  +  +G++PD+ 
Sbjct: 243 STGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVA 302

Query: 595 TYNTIICGYCS 605
            Y  ++ GY +
Sbjct: 303 IYAILLHGYAT 313


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 253/487 (51%), Gaps = 16/487 (3%)

Query: 106 DSLGDFGCDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
           DSLG     Y+   +I ++  + ++D    + A +  +G          L+  L     +
Sbjct: 101 DSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKI 160

Query: 164 GQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
           G+   L   M G+GF      Y  L++GL + G    A  + R ++Q+   PN++T N I
Sbjct: 161 GEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTI 220

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  L  + Q+  A ++F  ++  G  PNV T++++I+  CK ++ +    L N M++  +
Sbjct: 221 IDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKI 280

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +P+++I++ L+D L K G +   ++++   + RG++ DVV ++++MD +    ++  A +
Sbjct: 281 MPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADK 340

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            +D M+  G  PNVISYS LI G C+  R+ +A  LF ++  R L P+++TY++LI G C
Sbjct: 341 VFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLC 400

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM-------TLIPN 452
             G+LRD  +L+  M+  G  PD V   +L++ L     R   Q++ M        L P+
Sbjct: 401 HVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLC--KTRHLDQAMAMLKAIEGSNLAPD 458

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  +N ++DG CR+        LF  +    + PDV T+T++I G+  QG L+ A  LF 
Sbjct: 459 IQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFR 518

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M   G +PD  TY+ I  G  +       + + + M   G + D +   +++ ML  + 
Sbjct: 519 EMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDD- 577

Query: 573 NLDAALK 579
            LD ++K
Sbjct: 578 GLDQSVK 584



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 219/410 (53%), Gaps = 5/410 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           + +Q+   G   ++ T   ++   C   ++    S+   +  +G +P+  TF+TLI   C
Sbjct: 96  LSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLC 155

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            E K+ +A  L++ M+     P+ + Y  LI GL K G  +    LL + + +  + +V+
Sbjct: 156 VEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVI 215

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            +++++D       V  A+  +  M+  G  PNV +Y+ +I GLC+         L  ++
Sbjct: 216 TYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEM 275

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
           +  ++ P+++ +++L+D  CK G +     + D MI+RG++PD V  + L++G      M
Sbjct: 276 VDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEM 335

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A + F   VR    PN+  ++TL++G C+++R    + LF  M    + P+++T+  L
Sbjct: 336 DEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTL 395

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+   G L  AI LF +M+  G  PD++TY  ++  L K +++   + M K +E + +
Sbjct: 396 IHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNL 455

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           APDI  YN++++ + +   L+AA  LF  L+ +GL PD+ TY  +I G C
Sbjct: 456 APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLC 505



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 242/492 (49%), Gaps = 9/492 (1%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--VYEF-- 183
           IDE++  F  M  M    S     ++++ + +         L + M   G    VY    
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++N       ++  F +  ++ + G  P+  T   +++ LC+ G+IG A  LFD ++  G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PN VT+ TLI+  CK      A +L   M++ +  P++I Y+ +ID LFK  ++ E  
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +    + +G+  +V  ++S++       +        + M++   +PNV+ ++ L+  L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G +  A  +   ++ R +EP ++TY++L+DG C   ++ +   ++D M+++G  P+ 
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  S LING      +  A+  F +  +  L+PN+  +NTL+ G C + R  D + LF  
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      PD++T+ +L+  +     L  A+ +   +    L PD+ +Y+ +I G+ +   
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGE 474

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F  +   G+ PD+  Y +++N L  +  L  A KLF ++   G  PD  TYN 
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNL 534

Query: 599 IICGYCSLNSCL 610
           I  G+   N  L
Sbjct: 535 ITRGFLRNNETL 546


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 229/435 (52%), Gaps = 10/435 (2%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           F  Y  L+ GL +   +E A     +++ +GF P++ T   ++  LC+  ++  A    +
Sbjct: 11  FVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLE 70

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +      PNVVT++ LI+  CK  ++++A  L + M +   VP  + Y+ LI GL KA 
Sbjct: 71  EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAE 129

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           R  E  +LL   +  G   D+  +++++  +        A++ +++++  GF P+V++YS
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
            LI GLC++GRL EA  LFG+++      P+ +TY+SLI GFC+ GK+ +  +L + M +
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G  PD V  + L+NG      + DA     Q  R  L P++  F +LMDG CR  R +D
Sbjct: 250 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD 309

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            V +   M   +  P V T+  ++ G      L  A    F + +    P+V++++ +I 
Sbjct: 310 AVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA--RKFMLEEMDCPPNVVSFNIMIR 367

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ-LTDRGLE 590
           GL K    S  + + +   R    PD+ +Y  +++ L +E  +D A +++ + L + G  
Sbjct: 368 GLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCL 427

Query: 591 PDIITYNTIICGYCS 605
           P+ ITY+T+I G C+
Sbjct: 428 PNSITYSTLITGLCN 442



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 242/496 (48%), Gaps = 51/496 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   ++ ++++++     M   G +        ++  L   N + +  K    M 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  L++GL + G ++ A  +  + +++  VP  VT N ++  LC   +  
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK-MRKKCVPTAVTYNSLISGLCKAERAS 132

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L + ++  G  P++ T++TLI  FCK  K + A +++  ++     PD++ YS LI
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K GRLKE  +L                             GR +++      G  +
Sbjct: 193 DGLCKEGRLKEAIDLF----------------------------GRMIKS------GSCM 218

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN ++Y+ LI G C+ G++ EA  L  ++      P ++TY++L++GFCK  +L D + L
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            + M ++GL PD V  + L++GL     + DA+    +  R +  P ++ +NT++DG CR
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +  +  K FML  M +  P+V++  ++IRG+      S A+ L  +  +R   PDV+ 
Sbjct: 339 ANQLEEARK-FMLEEM-DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVM 396

Query: 526 YSAIIHGLFKGKNISVGLHMF-KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           Y+ +I GL + K +     ++ K++E  G  P+   Y+ L+  L     LD A       
Sbjct: 397 YTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI--- 453

Query: 585 TDRGLEPDIITYNTII 600
            ++G  P+I TYN +I
Sbjct: 454 -EKGCVPNIGTYNLLI 468



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 192/367 (52%), Gaps = 9/367 (2%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           + VT+++LI   CK  +LE+A      M+     PD+  Y+ +I  L    RL E  + L
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
               +R L  +VV ++ ++D     G V  AV    +M     +P  ++Y+ LI GLC+ 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKA 128

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
            R  EA  L  +++     P + TY++LI GFCKS K  D   +++ ++ RG +PD V  
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 427 SLLINGL-----MGDALRFFFQSVRM-TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           S LI+GL     + +A+  F + ++  + +PN   +N+L+ G CR+ +  + + L   M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                PDV+T+T L+ G      L  A  L  QM ++GLTPDV+T+++++ GL +   +S
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             +H+   M R   +P +  YN +L+   +   L+ A K    L +    P+++++N +I
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMI 366

Query: 601 CGYCSLN 607
            G C +N
Sbjct: 367 RGLCKVN 373



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 182/368 (49%), Gaps = 42/368 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + +  K D+++ +F  +   G    PD+V    SCL+D               
Sbjct: 153 YTTLITGFCKSKKSDDALRVFEQLVARG--FRPDVVT--YSCLID--------------- 193

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF-VPNIVTCNKILKRLCINGQIGNAS 233
                       GL ++G ++ A  +  ++I+ G  +PN VT N ++   C  G++  A 
Sbjct: 194 ------------GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           +L + +   G  P+VVT++TL+N FCK A+L+ A+ L N M    L PD++ ++ L+DGL
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            +  RL +   +L     +     V  +++++D Y     +  A +     ++    PNV
Sbjct: 302 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNV 359

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           +S++I+I+GLC+  R  EA  L  +   RR  P ++ Y+++IDG C+  K+ +   +Y  
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419

Query: 414 MIKR-GLKPDAVVCSLLINGL----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M++  G  P+++  S LI GL    M D  R + +      +PN+  +N L+D   +  R
Sbjct: 420 MLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK---GCVPNIGTYNLLIDAFRKANR 476

Query: 469 ATDTVKLF 476
             D  +L 
Sbjct: 477 DEDARELL 484


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 277/569 (48%), Gaps = 47/569 (8%)

Query: 52   IQFFKWTHNCVSSPNIAQL---IHVLLQSDMRDVA----SHVFDKMVIQFGKTY-NFFRL 103
            + FF W  +   S N+  L   IH+ + S    VA    S  +++  +    ++  FF L
Sbjct: 548  LDFFDWARSRRDS-NLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDL 606

Query: 104  FRDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
               +  D+G D   +    +  V  G + E+  +F  M + G+ LS D      SC V  
Sbjct: 607  LVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVD------SCNV-- 658

Query: 161  NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
              + +  K C                          A  + R+  + G   N+ + N ++
Sbjct: 659  -YLTRLSKDCYK---------------------TATAIIVFREFPEVGVCWNVASYNIVI 696

Query: 221  KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
              +C  G+I  A  L  ++ L G  P+V+++ST++N +C+  +L+K ++L  +M    L 
Sbjct: 697  HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 756

Query: 281  PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
            P+  IY  +I  L +  +L E  E     + +G+  D VV+++++D +   GD+  A + 
Sbjct: 757  PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 816

Query: 341  YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
            +  M +    P+V++Y+ +I G CQ G +VEA  LF ++  + LEP  +T++ LI+G+CK
Sbjct: 817  FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 876

Query: 401  SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
            +G ++D F ++++MI+ G  P+ V  + LI+GL     +  A     +  ++ L PN+F 
Sbjct: 877  AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 936

Query: 456  FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
            +N++++G C+     + VKL        +  D +T+T L+      G +  A  +  +ML
Sbjct: 937  YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 996

Query: 516  KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             +GL P ++T++ +++G      +  G  +   M   G+AP+   +N L+       NL 
Sbjct: 997  GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 1056

Query: 576  AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            AA  ++  +  RG+ PD  TY  ++ G+C
Sbjct: 1057 AATAIYKDMCSRGVGPDGKTYENLVKGHC 1085



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 204/417 (48%), Gaps = 5/417 (1%)

Query: 181  YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
            Y  ++NG  R G ++  + +   + ++G  PN      I+  LC   ++  A   F  ++
Sbjct: 727  YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 786

Query: 241  LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
              G  P+ V ++TLI+ FCK   +  A + +  M   D+ PD++ Y+ +I G  + G + 
Sbjct: 787  RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 846

Query: 301  EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
            E  +L      +GL+ D V F+ +++ Y   G +  A + ++ M+  G  PNV++Y+ LI
Sbjct: 847  EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 906

Query: 361  KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             GLC++G L  A  L  ++    L+P++ TY+S+++G CKSG + +   L       GL 
Sbjct: 907  DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 966

Query: 421  PDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
             D V  + L++     G M  A     + +   L P +  FN LM+G C      D  KL
Sbjct: 967  ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1026

Query: 476  FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
               M    I P+  T   L++    + +L +A  ++  M  RG+ PD  TY  ++ G  K
Sbjct: 1027 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 1086

Query: 536  GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
             +N+     +F+ M+  G +  ++ Y+VL+   +K      A ++F Q+   GL  D
Sbjct: 1087 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 217/435 (49%), Gaps = 6/435 (1%)

Query: 180  VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING-QIGNASSLFDV 238
            V++     L+  G++  A  +  +++  G V ++ +CN  L RL  +  +   A  +F  
Sbjct: 620  VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 679

Query: 239  LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
               VG   NV +++ +I+  C+  ++++A  L  LM      PD+I YS +++G  + G 
Sbjct: 680  FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 739

Query: 299  LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            L +  +L+     +GLK +  ++ S++     I  +  A + +  M+  G LP+ + Y+ 
Sbjct: 740  LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 799

Query: 359  LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            LI G C++G +  A   F ++  R + P +LTY+++I GFC+ G + +   L+  M  +G
Sbjct: 800  LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859

Query: 419  LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
            L+PD+V  + LING      M DA R     ++    PN+  + TL+DG C+        
Sbjct: 860  LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 919

Query: 474  KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +L   M    ++P++ T+  ++ G+   G++  A+ L  +    GL  D +TY+ ++   
Sbjct: 920  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979

Query: 534  FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
             K   +     + K M   G+ P I  +NVL+N       L+   KL   +  +G+ P+ 
Sbjct: 980  CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1039

Query: 594  ITYNTIICGYCSLNS 608
             T+N+++  YC  N+
Sbjct: 1040 TTFNSLVKQYCIRNN 1054



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 211/452 (46%), Gaps = 34/452 (7%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            YS ++  Y R G++D+  ++   M   G+  +  +   ++  L     + +  +    M 
Sbjct: 727  YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 786

Query: 175  GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             +G      VY  L++G  ++G I  A     ++  R   P+++T   I+   C  G + 
Sbjct: 787  RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 846

Query: 231  NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
             A  LF  +   G +P+ VTF+ LIN +CK   ++ AF+++N M++    P+++ Y+ LI
Sbjct: 847  EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 906

Query: 291  DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            DGL K G L   NELL      GL+ ++  ++S+++     G++  AV+        G  
Sbjct: 907  DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 966

Query: 351  PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
             + ++Y+ L+   C+ G + +A  +  ++L + L+P+++T++ L++GFC  G L DG  L
Sbjct: 967  ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1026

Query: 411  YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             + M+ +G+ P+A                                FN+L+   C      
Sbjct: 1027 LNWMLAKGIAPNATT------------------------------FNSLVKQYCIRNNLK 1056

Query: 471  DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
                ++  M    + PD  T+  L++G     ++  A  LF +M  +G +  V TYS +I
Sbjct: 1057 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116

Query: 531  HGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
             G  K K       +F  M R G+A D  I++
Sbjct: 1117 KGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 6/218 (2%)

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD------ALRFFFQSVRMTLIPNLFI 455
           G LR+   +++ M+  GL      C++ +  L  D      A+  F +   + +  N+  
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 691

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++   C+L R  +   L +LM +    PDVI+++ ++ G    G L     L   M 
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           ++GL P+   Y +II  L +   ++     F  M R G+ PD  +Y  L++   K  ++ 
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
           AA K F ++  R + PD++TY  II G+C +   +  G
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 849


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 229/435 (52%), Gaps = 10/435 (2%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           F  Y  L+ GL +   +E A     +++ +GF P++ T   ++  LC+  ++  A    +
Sbjct: 11  FVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLE 70

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +      PNVVT++ LI+  CK  ++++A  L + M +   VP  + Y+ LI GL KA 
Sbjct: 71  EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAE 129

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           R  E  +LL   +  G   D+  +++++  +        A++ +++++  GF P+V++YS
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
            LI GLC++GRL EA  LFG+++      P+ +TY+SLI GFC+ GK+ +  +L + M +
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G  PD V  + L+NG      + DA     Q  R  L P++  F +LMDG CR  R +D
Sbjct: 250 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD 309

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            V +   M   +  P V T+  ++ G      L  A    F + +    P+V++++ +I 
Sbjct: 310 AVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA--RKFMLEEMDCPPNVVSFNIMIR 367

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ-LTDRGLE 590
           GL K    S  + + +   R    PD+ +Y  +++ L +E  +D A +++ + L + G  
Sbjct: 368 GLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCL 427

Query: 591 PDIITYNTIICGYCS 605
           P+ ITY+T++ G C+
Sbjct: 428 PNSITYSTLVTGLCN 442



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 242/496 (48%), Gaps = 51/496 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   ++ ++++++     M   G +        ++  L   N + +  K    M 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  L++GL + G ++ A  +  + +++  VP  VT N ++  LC   +  
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK-MRKKCVPTAVTYNSLISGLCKAERAS 132

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L + ++  G  P++ T++TLI  FCK  K + A +++  ++     PD++ YS LI
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K GRLKE  +L                             GR +++      G  +
Sbjct: 193 DGLCKEGRLKEAIDLF----------------------------GRMIKS------GSCM 218

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN ++Y+ LI G C+ G++ EA  L  ++      P ++TY++L++GFCK  +L D + L
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            + M ++GL PD V  + L++GL     + DA+    +  R +  P ++ +NT++DG CR
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +  +  K FML  M +  P+V++  ++IRG+      S A+ L  +  +R   PDV+ 
Sbjct: 339 ANQLEEARK-FMLEEM-DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVM 396

Query: 526 YSAIIHGLFKGKNISVGLHMF-KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           Y+ +I GL + K +     ++ K++E  G  P+   Y+ L+  L     LD A       
Sbjct: 397 YTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI--- 453

Query: 585 TDRGLEPDIITYNTII 600
            ++G  P+I TYN +I
Sbjct: 454 -EKGCVPNIGTYNLLI 468



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 192/367 (52%), Gaps = 9/367 (2%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           + VT+++LI   CK  +LE+A      M+     PD+  Y+ +I  L    RL E  + L
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
               +R L  +VV ++ ++D     G V  AV    +M     +P  ++Y+ LI GLC+ 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKA 128

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
            R  EA  L  +++     P + TY++LI GFCKS K  D   +++ ++ RG +PD V  
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 427 SLLINGL-----MGDALRFFFQSVRM-TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           S LI+GL     + +A+  F + ++  + +PN   +N+L+ G CR+ +  + + L   M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                PDV+T+T L+ G      L  A  L  QM ++GLTPDV+T+++++ GL +   +S
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             +H+   M R   +P +  YN +L+   +   L+ A K    L +    P+++++N +I
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMI 366

Query: 601 CGYCSLN 607
            G C +N
Sbjct: 367 RGLCKVN 373



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 182/368 (49%), Gaps = 42/368 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + +  K D+++ +F  +   G    PD+V    SCL+D               
Sbjct: 153 YTTLITGFCKSKKSDDALRVFEQLVARG--FRPDVVT--YSCLID--------------- 193

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF-VPNIVTCNKILKRLCINGQIGNAS 233
                       GL ++G ++ A  +  ++I+ G  +PN VT N ++   C  G++  A 
Sbjct: 194 ------------GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           +L + +   G  P+VVT++TL+N FCK A+L+ A+ L N M    L PD++ ++ L+DGL
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            +  RL +   +L     +     V  +++++D Y     +  A +     ++    PNV
Sbjct: 302 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP--PNV 359

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           +S++I+I+GLC+  R  EA  L  +   RR  P ++ Y+++IDG C+  K+ +   +Y  
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419

Query: 414 MIKR-GLKPDAVVCSLLINGL----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M++  G  P+++  S L+ GL    M D  R + +      +PN+  +N L+D   +  R
Sbjct: 420 MLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK---GCVPNIGTYNLLIDAFRKANR 476

Query: 469 ATDTVKLF 476
             D  +L 
Sbjct: 477 DEDARELL 484


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 221/401 (55%), Gaps = 31/401 (7%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            +++ G  PN+ T N +++ LC  G++  A  +   +   G  PN VT++TL+ AFC+  
Sbjct: 142 SMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG 201

Query: 263 KLEKAFQLYNLMMEM-DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
           +L+ A ++ +LM E  +  P+L+ ++ +++GL KAGR++   ++    +  GL  DVV +
Sbjct: 202 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 261

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++  Y  +G +  ++  +  M   G +P+V++++ LI   C+ G L +A  L  Q+  
Sbjct: 262 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 321

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           R L  + +T+++LIDGFCK G L D     + M K G++P +VVC               
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP-SVVC--------------- 365

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
                         +N L++G C+L R     +L   M    +KPDV+T++ +I G    
Sbjct: 366 --------------YNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G+L SA  L  +MLK+G+ PD ITYS++I GL + K ++    +F+ M + GV PD   Y
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             L++   KE N++ AL L  ++  +G+ PD++TY+ +I G
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 512



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 233/468 (49%), Gaps = 32/468 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+  + R G++D +  + + M + G    P+LV    +++ L  +  +    K+   
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEG-NAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L++G  + G +  +  +  ++ QRG VP++VT   ++   C  G 
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A +L   +   G + N VTF+ LI+ FCK+  L+ A      M +  + P ++ Y+ 
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+G  K GR+    EL+     + +K DVV +S+++  Y  +G++  A Q   +ML  G
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP+ I+YS LI+GLC++ RL +AC LF  +L   ++P   TY++LIDG CK G +    
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           SL+D MI++G+ PD V  S+LINGL       +A R  F+      +P+   ++ LM  C
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML-C 547

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C                    K +  +   L++G   +G +  A  ++  ML R    D 
Sbjct: 548 CS-------------------KAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             YS +IHG  +G N+   L   K M R+G +P+      L+  L +E
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEE 636



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 229/458 (50%), Gaps = 62/458 (13%)

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCING 227
           MRG G       Y  L+    R G ++ A  +   + + G   PN+VT N ++  LC  G
Sbjct: 178 MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAG 237

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  +FD ++  G  P+VV+++TL++ +CK   L ++  +++ M +  LVPD++ ++
Sbjct: 238 RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 297

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI    KAG L++   L+    +RGL+++ V F++++D +   G +  A+   + M   
Sbjct: 298 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC 357

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V+ Y+ LI G C+ GR+  A  L  ++  +R++P ++TYS++I G+CK G L   
Sbjct: 358 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 417

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           F L   M+K+G+ PDA+  S LI GL                              C  K
Sbjct: 418 FQLNQKMLKKGVLPDAITYSSLIRGL------------------------------CEEK 447

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  D  +LF  M    ++PD  T+T LI G   +G++  A+ L  +M+++G+ PDV+TYS
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507

Query: 528 AIIHGLFKGKNISVGLHM-FKLMERNGVAPDIAIYNVLL--------------------N 566
            +I+GL K         + FKL   + V PD   Y+ L+                     
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPV-PDNIKYDALMLCCSKAEFKSVVALLKGFCMK 566

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L+KE +     K++  + DR  + D   Y+ +I G+C
Sbjct: 567 GLMKEAD-----KVYQSMLDRNWKLDGSVYSILIHGHC 599



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 188/398 (47%), Gaps = 32/398 (8%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G+ P++   N +L  L  +  + +A      +L  G  PNV T++ L+ A C   +LE+A
Sbjct: 113 GYAPSVPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMD 326
             +   M      P+ + Y+ L+    +AG L     ++    + G  K ++V F+S+++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G +  A + +D M+  G  P+V+SY+ L+ G C+ G L E+  +F ++  R L P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
            ++T++SLI   CK+G L    +L   M +RGL+ + V                      
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT--------------------- 330

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
                    F  L+DG C+     D +     M    I+P V+ +  LI G    G +  
Sbjct: 331 ---------FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 381

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L  +M  + + PDV+TYS II G  K  N+     + + M + GV PD   Y+ L+ 
Sbjct: 382 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 441

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L +E  L+ A +LF  +   G++PD  TY T+I G+C
Sbjct: 442 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 156/279 (55%), Gaps = 8/279 (2%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           ML  G  PNV +Y+IL++ LC +GRL EA G+ G +      P+ +TY++L+  FC++G+
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 404 LRDGFSLYDNMIKRG-LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
           L     +   M + G  KP+ V  + ++NGL     M  A + F + VR  L P++  +N
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           TL+ G C++    +++ +F  M    + PDV+T T LI      G+L  A+ L  QM +R
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           GL  + +T++A+I G  K   +   L   + M + G+ P +  YN L+N   K   +D A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
            +L  ++  + ++PD++TY+TII GYC + +  +D  F+
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGN--LDSAFQ 419



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 200/435 (45%), Gaps = 74/435 (17%)

Query: 63  SSPNIA---QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLI 119
           + PN+     +++ L ++   + A  VFD+MV             R+ L      Y+ L+
Sbjct: 219 AKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV-------------REGLAPDVVSYNTLL 265

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG 177
             Y ++G + ES+ +F+ M+  G  L PD+V    L+     + ++ Q   L   MR +G
Sbjct: 266 SGYCKVGCLHESLAVFSEMTQRG--LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323

Query: 178 FCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
             + E     L++G  +KG +++A     ++ + G  P++V  N ++   C  G++  A 
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L   +     KP+VVT+ST+I+ +CK   L+ AFQL   M++  ++PD I YS LI GL
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            +  RL +  EL    L  G++ D   +++++D +   G+V +A+  +D M+  G LP+V
Sbjct: 444 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 503

Query: 354 ISYSILI--------------------------------------------------KGL 363
           ++YS+LI                                                  KG 
Sbjct: 504 VTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGF 563

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C +G + EA  ++  +L R  +     YS LI G C+ G +R   S +  M++ G  P++
Sbjct: 564 CMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNS 623

Query: 424 VVCSLLINGLMGDAL 438
                L+ GL  + +
Sbjct: 624 TSTISLVRGLFEEGM 638



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 181/371 (48%), Gaps = 46/371 (12%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P+V  ++ ++ A   +A L  A +  + M+   + P++  Y+IL+  L   GRL+E 
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
                                       +G VG        M   G  PN ++Y+ L+  
Sbjct: 172 ----------------------------VGVVGD-------MRGAGCAPNAVTYNTLVAA 196

Query: 363 LCQQGRLVEACGLFGQVLIRR---LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
            C+ G L  A  +    L+R     +P+L+T++S+++G CK+G++     ++D M++ GL
Sbjct: 197 FCRAGELDGAERVVS--LMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGL 254

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V  + L++G      + ++L  F +  +  L+P++  F +L+   C+       V 
Sbjct: 255 APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVA 314

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M    ++ + +T T LI G   +G L  A+L   +M K G+ P V+ Y+A+I+G  
Sbjct: 315 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 374

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   + +   + + ME   V PD+  Y+ +++   K  NLD+A +L  ++  +G+ PD I
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434

Query: 595 TYNTIICGYCS 605
           TY+++I G C 
Sbjct: 435 TYSSLIRGLCE 445



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 171/343 (49%), Gaps = 28/343 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI+ + + G +D+++     M   GI  S      L++       +    +L R M 
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390

Query: 175 GK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K        Y  +++G  + G +++AF ++++++++G +P+ +T + +++ LC   ++ 
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  LF+ +L +G +P+  T++TLI+  CKE  +EKA  L++ M+   ++PD++ YS+LI
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI 510

Query: 291 DGLFKAGRLKEGNELLLT-----ALDRGLKLDVVV-------FSSVMDAYVGI---GDVG 335
           +GL K+ R KE + LL        +   +K D ++       F SV+    G    G + 
Sbjct: 511 NGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMK 570

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A + Y  ML+  +  +   YSILI G C+ G + +A     Q+L     P+  +  SL+
Sbjct: 571 EADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL 438
            G  + G + +     DN I+     D + C  L +     AL
Sbjct: 631 RGLFEEGMVVEA----DNAIQ-----DLLTCCPLADAEASKAL 664



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 38/83 (45%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  L++G  R G +  A   H+Q+++ GF PN  +   +++ L   G +  A +    L
Sbjct: 590 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649

Query: 240 LLVGPKPNVVTFSTLINAFCKEA 262
           L   P  +      LI+   KE 
Sbjct: 650 LTCCPLADAEASKALIDLNRKEG 672


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 228/445 (51%), Gaps = 20/445 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  LMNGL R+G +  A  +  ++++ G  P+ VT   I+  +C  G   +A ++   +
Sbjct: 12  TFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKM 71

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                K NVV +S +++  CK+    KA  ++  M E  + P+++ Y+ +IDG    G+ 
Sbjct: 72  DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKW 131

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +  +LL   ++R +  DVV FS++++A+V  G V  A + Y  ML     P  I+YS +
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG-----------FCKSGKLRDGF 408
           I G C+  RL +A  +F  ++ +   P ++T ++LIDG           FC+ G +    
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQ 251

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFF--FQSVRMTLIPNLFIFNTLMD 461
            L+  MI  G+ PD V C+ L+     NG +  AL  F  FQ  +M L  +    N +++
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDL--DTATCNIIIN 309

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+  +  +   LF  + +  ++ DV+T+ +LI     +G+   A  ++ +ML +G+ P
Sbjct: 310 GMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIP 369

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
             +TY++++ G  K   +     M   M   G +PD+  ++ L+    K   +D  L+LF
Sbjct: 370 STVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELF 429

Query: 582 GQLTDRGLEPDIITYNTIICGYCSL 606
            ++  RGL  D ITYN +I G+C +
Sbjct: 430 SEMCQRGLVADTITYNALIHGFCKV 454



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 199/388 (51%), Gaps = 22/388 (5%)

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           ++  G   NVVTF+TL+N  C+E ++ +A  L + M+E    PD + Y  +++G+ K G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
                 +L    +  +K +VV++S+++D     G+  +A   +  M   G  PNV++Y+ 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +I G C  G+  +A  L   ++ R ++P ++T+S+LI+ F K GK+     LY  M++R 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR----- 468
           + P  +  S +I+G      + DA   F   V     P++   NTL+DGCCR KR     
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 469 ---------ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
                    A D   LF  M    + PD++T   L+ G+   G L  A+ +F    K  +
Sbjct: 241 FCQVGNVNVAQD---LFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             D  T + II+G+ KG  +     +F  +  NGV  D+  YN+L+ + +KE N   A  
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAED 357

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLN 607
           ++ ++  +G+ P  +TYN+++ G+C  N
Sbjct: 358 IYLEMLCKGIIPSTVTYNSMVDGFCKQN 385



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 223/432 (51%), Gaps = 19/432 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y  +++ L + G    A ++  ++ ++G  PN++T N ++   C  G+  +A  L   +
Sbjct: 82  IYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDM 141

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +     P+VVTFS LINAF KE K+  A +LY  M+  ++ P  I YS +IDG  K  RL
Sbjct: 142 IERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRL 201

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMD-----------AYVGIGDVGRAVQTYDRMLNGG 348
           ++   +    + +G   D++  ++++D            +  +G+V  A   +  M++ G
Sbjct: 202 EDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNG 261

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++++ + L+ GLC+ G+L +A  +F      +++    T + +I+G CK  K+ + +
Sbjct: 262 VSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAW 321

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM--GDALR---FFFQSVRMTLIPNLFIFNTLMDGC 463
            L++++   G++ D V  ++LI   +  G+ LR    + + +   +IP+   +N+++DG 
Sbjct: 322 DLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGF 381

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  R  +  ++   M      PDV+T + LI+G    G +   + LF +M +RGL  D 
Sbjct: 382 CKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADT 441

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           ITY+A+IHG  K  +++    +F+ M  +GV PD   +  +L  L  +  L   L +   
Sbjct: 442 ITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLED 501

Query: 584 L---TDRGLEPD 592
           L    D  LE D
Sbjct: 502 LQKSVDHELEDD 513



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 196/427 (45%), Gaps = 45/427 (10%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVL-----------LQSDMRDVAS 84
           +AI+  L K  N   A   F   H     PN+     ++            +  +RD+  
Sbjct: 84  SAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIE 143

Query: 85  HVFDKMVIQFGKTYNFF--------------RLFRDSLGDFGCDYSFLIENYVRIGKIDE 130
              D  V+ F    N F               + R ++      YS +I+ + +  ++++
Sbjct: 144 RNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLED 203

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR 190
           +  +F  M   G   SPD++   ++ L+D          CRA R         L++G  +
Sbjct: 204 AKHMFDLMVSKG--CSPDIIT--LNTLIDG--------CCRAKR--------HLIHGFCQ 243

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
            G +  A  + +++I  G  P+IVTCN +L  LC NG++  A  +F V        +  T
Sbjct: 244 VGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTAT 303

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
            + +IN  CK  K+++A+ L+N +    +  D++ Y+ILI    K G      ++ L  L
Sbjct: 304 CNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEML 363

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
            +G+    V ++S++D +     +  A Q  D M++ G  P+V+++S LIKG C+ GR+ 
Sbjct: 364 CKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVD 423

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           +   LF ++  R L    +TY++LI GFCK G L     +++ M+  G+ PD +    ++
Sbjct: 424 DGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSML 483

Query: 431 NGLMGDA 437
            GL   A
Sbjct: 484 AGLCTKA 490



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 123/233 (52%), Gaps = 5/233 (2%)

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFF 441
           +++T+++L++G C+ G++    +L D M++ G +PDAV    ++NG+  +GD   AL   
Sbjct: 9   NVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNML 68

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +     +  N+ I++ ++D  C+         +F  M    I P+V+T+  +I G  S 
Sbjct: 69  RKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSY 128

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G  S A  L   M++R + PDV+T+SA+I+   K   +S    +++ M R  + P    Y
Sbjct: 129 GKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITY 188

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGY 614
           + +++   K   L+ A  +F  +  +G  PDIIT NT+I G C     LI G+
Sbjct: 189 SSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGF 241


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 223/422 (52%), Gaps = 8/422 (1%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L+R G +E  F     ++  G VP+I+ C  +++  C  G+   A+ + +VL   G  P+
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V+T++ +I+ +CK  ++  A  + +    M + PD++ Y+ ++  L  +G+LK+  E+L 
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             L R    DV+ ++ +++A      VG+A++  D M + G  P+V++Y++L+ G+C++G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           RL EA      +     +P+++T++ ++   C +G+  D   L  +M+++G  P  V  +
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 428 LLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +LIN     GL+G A+    +  +    PN   +N L+ G C+ K+    ++    M   
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
              PD++T+  ++  +   G +  A+ +  Q+  +G +P +ITY+ +I GL K       
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           + +   M    + PD   Y+ L+  L +E  +D A+K F +    G+ P+ +T+N+I+ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLG 528

Query: 603 YC 604
            C
Sbjct: 529 LC 530



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 221/424 (52%), Gaps = 8/424 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+ G  R G    A  +   +   G VP+++T N ++   C  G+I NA S+ D + +  
Sbjct: 143 LIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV-- 200

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVT++T++ + C   KL++A ++ + M++ D  PD+I Y+ILI+   +   + +  
Sbjct: 201 -SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAM 259

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +LL    DRG   DVV ++ +++     G +  A++  + M + G  PNVI+++I+++ +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C  GR ++A  L   +L +   PS++T++ LI+  C+ G L     + + M K G +P++
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNS 379

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  + L++G      M  A+ +  + V     P++  +NT++   C+  +  D V++   
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +      P +IT+  +I G+A  G    AI L  +M  + L PD ITYS+++ GL +   
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   +  F   ER GV P+   +N ++  L K    D A+     + +RG +P   +Y  
Sbjct: 500 VDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTI 559

Query: 599 IICG 602
           +I G
Sbjct: 560 LIEG 563



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 242/480 (50%), Gaps = 20/480 (4%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLS-PDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG-- 177
           VR G+++E    F ++ +M  + + PD++    L+          +  K+   + G G  
Sbjct: 113 VRTGELEEG---FKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAV 169

Query: 178 --FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASS 234
                Y  +++G  + G I NA      V+ R  V P++VT N IL+ LC +G++  A  
Sbjct: 170 PDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           + D +L     P+V+T++ LI A C+++ + +A +L + M +    PD++ Y++L++G+ 
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K GRL E  + L      G + +V+  + ++ +    G    A +    ML  GF P+V+
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +++ILI  LC++G L  A  +  ++     +P+ L+Y+ L+ GFCK  K+       + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 415 IKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + RG  PD V     + +L  +G + DA+    Q       P L  +NT++DG  +  + 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              +KL   M   ++KPD IT++ L+ G++ +G +  AI  F +  + G+ P+ +T+++I
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSI 525

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           + GL K +     +     M   G  P    Y +L+  L  E     AL+L  +L ++GL
Sbjct: 526 MLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 209/445 (46%), Gaps = 74/445 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  Y + G+I+ ++ +   MS     +SPD+V                        
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMS-----VSPDVV------------------------ 205

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++  L   G ++ A  +  +++QR   P+++T   +++  C +  +G A  
Sbjct: 206 -----TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMK 260

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L D +   G  P+VVT++ L+N  CKE +L++A +  N M      P++I ++I++  + 
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG------------------- 335
             GR  +  +LL   L +G    VV F+ +++     G +G                   
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSL 380

Query: 336 ----------------RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
                           RA++  +RM++ G  P++++Y+ ++  LC+ G++ +A  +  Q+
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
             +   P L+TY+++IDG  K+GK      L D M  + LKPD +  S L+ GL     +
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++FF +  RM + PN   FN++M G C+ ++    +   + M     KP   ++T+L
Sbjct: 501 DEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTIL 560

Query: 495 IRGIASQGSLSSAILLFFQMLKRGL 519
           I G+A +G    A+ L  ++  +GL
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 158/325 (48%), Gaps = 13/325 (4%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLV 158
           D + D GC      Y+ L+    + G++DE+++    M   G    P+++    ++  + 
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC--QPNVITHNIILRSMC 320

Query: 159 DSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
            +       KL   M  KGF      +  L+N L RKG++  A  +  ++ + G  PN +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSL 380

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           + N +L   C   ++  A    + ++  G  P++VT++T++ A CK+ K+E A ++ N +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
                 P LI Y+ +IDGL KAG+  +  +LL     + LK D + +SS++      G V
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A++ +      G  PN ++++ ++ GLC+  +   A      ++ R  +P+  +Y+ L
Sbjct: 501 DEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTIL 560

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+G    G  ++   L + +  +GL
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 8/211 (3%)

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLF 454
           ++G+L +GF   +NM+  G  PD + C+ LI G   MG    A +          +P++ 
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVI 173

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +N ++ G C+     + + +   M   ++ PDV+T+  ++R +   G L  A+ +  +M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           L+R   PDVITY+ +I    +   +   + +   M   G  PD+  YNVL+N + KE  L
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           D A+K    +   G +P++IT+N I+   CS
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 243/448 (54%), Gaps = 14/448 (3%)

Query: 171 RAMRG---KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           RA+R      +  Y   ++GL +   +++AF + +++ ++  +P  VT   ++  L   G
Sbjct: 32  RAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAG 91

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A ++ + ++  G  P + T++ +I+   K  ++E+A +++  M+     PD  +Y+
Sbjct: 92  RLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYT 151

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKL----DVVVFSSVMDAYVGIGDVGRAVQTY-D 342
            LI GL K+G+ +E   L   A  R        DVV ++S++D     G +  A Q + D
Sbjct: 152 ALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDD 211

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
             +  GF+P+ ++Y+ +I GLC+ GR+ E C  F ++  R  EP  +TY++LIDGF K+ 
Sbjct: 212 EAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAK 271

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
            +     +Y  M++ G     V  +++++GL     + +A   F        +  +  ++
Sbjct: 272 MIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYS 331

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            LMDG C     +  V+LF  M     +P+++++ ++IRG+   G L+ A   F ++L+R
Sbjct: 332 ALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR 391

Query: 518 GLTPDVITYSAIIHGLFKG-KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            L PDV T++A +HGL +    +S G+ +F+ M   G +P++  Y++L++ + +   L+ 
Sbjct: 392 RLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEV 451

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           AL++F ++  RG+ PD++ +NT+I   C
Sbjct: 452 ALEIFREMVSRGVAPDVVVFNTLIRWLC 479



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 251/505 (49%), Gaps = 20/505 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           ++ +I    R  ++DE+  +       G    PD V     +  L  +  V   ++L + 
Sbjct: 10  FTVVINGLCREKRLDEAFSVLERAVRAGC--EPDYVTYNVFIDGLCKAERVDDAFQLLKK 67

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  K        Y  L++GLL+ G ++ A  +  Q++++G  P + T   ++  L   G+
Sbjct: 68  MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGR 127

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM----MEMDLVPDLI 284
           +  A  +F  +L  G +P+   ++ LI   CK  K E+A+ LY            VPD++
Sbjct: 128 VEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVV 187

Query: 285 IYSILIDGLFKAGRLKEGNELLL-TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
            Y+ LIDGL KAGR+ E  ++    A++RG   D V ++S++D    +G V    + +  
Sbjct: 188 TYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 247

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M N G+ P+ ++Y+ LI G  +   + +A  ++ Q+L      S +TY+ ++DG CK+G+
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNT 458
           + + ++ +  M +RG     V  S L++G   +     A+  F + +     PNL  +N 
Sbjct: 308 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 367

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ-GSLSSAILLFFQMLKR 517
           ++ G CR  +       F  +    + PDV T    + G+  +  ++S  + LF  M+ +
Sbjct: 368 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G +P++ +YS ++ G+ +   + V L +F+ M   GVAPD+ ++N L+  L     +D A
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487

Query: 578 LKLFGQLTDRGLEPDIITYNTIICG 602
           L++F +L  R   PD  +Y +++ G
Sbjct: 488 LEVFRELERRSA-PDAWSYWSLLDG 511



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 195/380 (51%), Gaps = 11/380 (2%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P++V F+ +IN  C+E +L++AF +    +     PD + Y++ IDGL KA R+ +  +L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L    ++      V +++++D  +  G +  A+   ++M+  G  P + +Y+++I GL +
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK----P 421
            GR+ EA  +F  +L     P    Y++LI G CKSGK  + ++LY     R       P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 422 DAVVCSLLINGL--MGDALR----FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           D V  + LI+GL   G  L     F  ++V    IP+   + +++DG C+L R  +  + 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M     +PD +T+  LI G      +  A  ++ QML+ G     +TY+ I+ GL K
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              ++     F  ME  G    +  Y+ L++    E N+ AA++LF ++ DRG EP++++
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 596 YNTIICGYCSLNSCLIDGYF 615
           YN II G C     L   YF
Sbjct: 365 YNIIIRGLCRAGK-LAKAYF 383



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 220/422 (52%), Gaps = 16/422 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+   + G+++E+  IF  M   G      +   L+  L  S    + Y L +   
Sbjct: 115 YTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEAN 174

Query: 175 GKGF--------CVYEFLMNGLLRKGVIENAFHM-HRQVIQRGFVPNIVTCNKILKRLCI 225
            +            Y  L++GL + G I  A  +   + ++RGF+P+ VT   I+  LC 
Sbjct: 175 ARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCK 234

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            G++      F  +   G +P+ VT++ LI+ F K   + KA ++Y  M++   V   + 
Sbjct: 235 LGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 294

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+I++DGL KAGR+ E     L   +RG    VV +S++MD +   G+V  AV+ + RML
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 354

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS-GKL 404
           + G  PN++SY+I+I+GLC+ G+L +A   F ++L RRL P + T+++ + G C+    +
Sbjct: 355 DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTV 414

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
            DG  L+++M+ +G  P+    S+L++G+     +  AL  F + V   + P++ +FNTL
Sbjct: 415 SDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTL 474

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +   C   R  + +++F  +   +  PD  ++  L+ G++    +  A LL F M  +G 
Sbjct: 475 IRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGC 533

Query: 520 TP 521
            P
Sbjct: 534 AP 535


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 264/540 (48%), Gaps = 51/540 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I  Y + G++D++  +   M D GI+++  +   +++ L     + +  K+ + M 
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++G  R+G +  AF M R +++ G     +T N +LK  C    I 
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  L+ ++L  G  PN ++ STL++   K  K E+A  L+   +   L  ++I ++ +I
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K GR+ E  ELL    +     D + + ++ D Y  +G +G A    ++M + GF 
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFA 566

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V  ++  I G     +  +   +  ++  R L P+L+TY +LI G+CK G L +  +L
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFI---------- 455
           Y  M+  G+ P+  +CS L++     G + +A     + V + +IP   I          
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686

Query: 456 ----------------FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                           +N ++ G C+  R  D   LF  +      PD  T++ LI G A
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
           + GS+  A  L   ML  GLTP++ITY+++I+GL K   +S  +++F  ++  G++P+  
Sbjct: 747 ASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGI 806

Query: 560 IYNVLLN----------------MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            YN L++                 +++E  ++ A+KL  Q+ +  ++P+ ITY T+I GY
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGY 866



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/561 (25%), Positives = 262/561 (46%), Gaps = 18/561 (3%)

Query: 47  NPTPAIQFFKWTHNCVSSPNIAQLIHVLLQS----DMRDVASHVFDKMVIQFGKTYNFFR 102
           +P  A+  F+   +  S  + AQL+H+L ++    D R + S +       F      +R
Sbjct: 83  DPDAALHLFRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYR 142

Query: 103 LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS 162
            F  S       +  L+  +   G++  ++ +F  M  +G   S     RL++ LV S  
Sbjct: 143 DFTFS----AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGD 198

Query: 163 VGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
            G    +   MR  G    EF    +     R G +  A     ++   G   N+V  + 
Sbjct: 199 PGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHA 258

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM- 277
           ++   C  G   +A  + + L   G  PNVVT++ L+  +CK+ ++E+A ++   M E  
Sbjct: 259 VMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           D+V D + Y ++I+G  + GR+ +   +     D G+ +++ V++++++    +G +   
Sbjct: 319 DIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            +    M + G  P+  SY+ LI G C++G + +A  +   ++   L  + LTY++L+ G
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKG 438

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPN 452
           FC    + D   L+  M+KRG+ P+ + CS L++GL        AL  + +++   L  N
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  FNT+++G C++ R  +  +L   M      PD +T+  L  G    G L +A  L  
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M   G  P V  +++ I G F  K       +   M   G++P++  Y  L+    KE 
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 573 NLDAALKLFGQLTDRGLEPDI 593
           NL  A  L+ ++ + G+ P++
Sbjct: 619 NLHEACNLYFEMVNNGMNPNV 639



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 143/564 (25%), Positives = 251/564 (44%), Gaps = 77/564 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y  +++ Y  +G  +++  I   +   G  LSP++V    L+        + +  ++ + 
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESLQRKG--LSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313

Query: 173 MRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           M+  G  V     Y  ++NG  ++G +++A  +  ++   G   N+   N ++  LC  G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++     +   +  VG +P+  +++TLI+ +C+E  + KAF++  +M+   L    + Y+
Sbjct: 374 RMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYN 433

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+ G      + +   L    L RG+  + +  S+++D     G   +A+  +   L  
Sbjct: 434 TLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR 493

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD- 406
           G   NVI+++ +I GLC+ GR+ EA  L  ++   R  P  LTY +L DG+CK G+L   
Sbjct: 494 GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553

Query: 407 ----------GFS------------------------LYDNMIKRGLKPDAVVCSLLING 432
                     GF+                        ++  M  RGL P+ V    LI G
Sbjct: 554 THLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAG 613

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF--------MLM 479
                 + +A   +F+ V   + PN+FI + LM  C   +   D   L         M+ 
Sbjct: 614 WCKEGNLHEACNLYFEMVNNGMNPNVFICSALMS-CFYKEGKVDEANLVLQKLVNIDMIP 672

Query: 480 G--MYNIKPDVITH-----------------TVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           G  +  I+ D I+H                  V+I G+   G ++ A  LF  +  +   
Sbjct: 673 GCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFL 732

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD  TYS++IHG     +I     +  +M   G+ P+I  YN L+  L K   L  A+ L
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
           F +L  +G+ P+ ITYNT+I  YC
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYC 816



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 214/417 (51%), Gaps = 16/417 (3%)

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
           H   + R F  + V+ + +L+     GQ+ +A ++FD +  VG +P++ + + L+N   +
Sbjct: 136 HLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQ 195

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
                 A  +Y  M    ++PD    +I+     + GR+ +  E +      GL++++V 
Sbjct: 196 SGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVA 255

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           + +VMD Y G+G    A +  + +   G  PNV++Y++L+KG C+ GR+ EA     + +
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEA-----ERV 310

Query: 381 IRRLEPS------LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           ++ ++ +       + Y  +I+G+C+ G++ D   + + M   G+  +  V + +INGL 
Sbjct: 311 VKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLC 370

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               M +  +   +   + + P+ + +NTL+DG CR        ++  +M    +    +
Sbjct: 371 KLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTL 430

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+  L++G  S  ++  A+ L+F MLKRG+ P+ I+ S ++ GLFK       L+++K  
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              G+A ++  +N ++N L K   +  A +L  ++ +    PD +TY T+  GYC L
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKL 547



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 139/570 (24%), Positives = 240/570 (42%), Gaps = 102/570 (17%)

Query: 75  LQSDMRDVASHV----FDKMV---IQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENY 122
           ++++MRD   HV    ++ M+    + G+     ++ ++ + D G       Y+ LI+ Y
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE-MEDVGMRPDKYSYNTLIDGY 404

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
            R G + ++ E+   M   G+  +      L+      +++    +L   M  +G    E
Sbjct: 405 CREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNE 464

Query: 183 F----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
                L++GL + G  E A ++ ++ + RG   N++T N ++  LC  G++  A  L D 
Sbjct: 465 ISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR 524

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM--------MEM------------- 277
           +  +   P+ +T+ TL + +CK  +L  A  L N M        +EM             
Sbjct: 525 MKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ 584

Query: 278 --------------DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
                          L P+L+ Y  LI G  K G L E   L    ++ G+  +V + S+
Sbjct: 585 WHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSA 644

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNV--------------------------ISYS 357
           +M  +   G V  A     +++N   +P                            + ++
Sbjct: 645 LMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWN 704

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           ++I GLC+ GR+ +A  LF  +  +R  P   TYSSLI G   SG + + FSL D M+  
Sbjct: 705 VIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA 764

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           GL P+ +  + LI GL     +  A+  F +     + PN   +NTL+D  C+  + T+ 
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEA 824

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            KL   M                     +G +  AI L  QM++  + P+ ITY  +IHG
Sbjct: 825 FKLKQKM-------------------VEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 865

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
             K  N+     ++  M   G+ P   I N
Sbjct: 866 YIKSGNMEEISKLYDEMHIRGLLPTNWIGN 895



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 23/349 (6%)

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELL-------------LTALDRGLKLDVVVFSSVMDA 327
           P L+ ++ L+  L +A R  +   LL             L  + R      V F  ++ A
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +   G +  A+  +D M   G  P++ S + L+  L Q G    A  ++GQ+ I  + P 
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
             T + +   +C+ G++       + M   GL+ + V    +++     G   DA R   
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277

Query: 443 QSVRMTLIPNLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              R  L PN+  +  L+ G C   R++ A   VK     G  +I  D + + ++I G  
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG--DIVVDEVAYGMMINGYC 335

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G +  A  +  +M   G+  ++  Y+ +I+GL K   +     + + ME  G+ PD  
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY 395

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            YN L++   +E ++  A ++   +   GL    +TYNT++ G+CSL++
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 251/504 (49%), Gaps = 44/504 (8%)

Query: 110 DFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVG 164
           D GC+     Y+ LI+   +  + D + E+F +M    +  SP +V              
Sbjct: 3   DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMK--SVECSPSMV-------------- 46

Query: 165 QYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                           Y  L++GL R G +E A  + ++++ R    ++++ N ++  LC
Sbjct: 47  ---------------TYNTLLDGLFRTGKLERAMALFQEMLDR-RSHDVISFNILVTGLC 90

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+I  A   F  +      PNV+T+S LI+  CK  ++ +A +L   M      PD+I
Sbjct: 91  RAGKIETALEFFRKMD-DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVI 149

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+IL+DGL K  ++    E+L   LD G   ++V ++S++        V  A+     M
Sbjct: 150 TYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM 209

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
              G  PNV++Y  LI GLC+ GR+ +AC +   ++ +   P L+ Y+ LI+G CK+ ++
Sbjct: 210 TCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQV 269

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
            +  +L    +  G+KPD V  S +I GL     + +A R           P++ +++TL
Sbjct: 270 DESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTL 329

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG C+  +  +   L+ +M       DV+T++ LI G+   G +  A LL  +M++ G 
Sbjct: 330 IDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGT 389

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD-AAL 578
            P  +TY+++I GL    ++   + + + MER+  AP    YN+L++ + +   +D AAL
Sbjct: 390 PPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAAL 449

Query: 579 KLFGQLTDRGLEPDIITYNTIICG 602
             F ++ D G+ PD ITY+ ++ G
Sbjct: 450 DYFQEMIDNGVIPDHITYSILLEG 473



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 246/519 (47%), Gaps = 55/519 (10%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG 95
           N+++  L K N P  A + F+   +   SP++              V  +     + + G
Sbjct: 14  NSLIDGLCKNNEPDRAQELFEHMKSVECSPSM--------------VTYNTLLDGLFRTG 59

Query: 96  KTYNFFRLFRDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           K      LF++ L     D   ++ L+    R GKI+ ++E F  M D     SP+++  
Sbjct: 60  KLERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDD---RCSPNVI-- 114

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                                       Y  L++GL +   +  A  +   +  RG  P+
Sbjct: 115 ---------------------------TYSVLIDGLCKANRVSQAVELLESMKARGCSPD 147

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           ++T   ++  LC   ++  A  +   +L  G  PN+VT+++L++  C+  ++  A  L  
Sbjct: 148 VITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 207

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M      P+++ Y  LIDGL K GR+K+   +L   +D+G   D+++++ +++      
Sbjct: 208 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
            V  ++    R ++GG  P+V++YS +I GLC+  RL EAC L   V  R   P ++ YS
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 327

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM 447
           +LIDG CK+GK+ + F LY+ M   G   D V  S LI+GL     + +A     + VRM
Sbjct: 328 TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 387

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
              P+   +N+L+ G C L    + ++L   M   N  P  +T+ +LI G+     + SA
Sbjct: 388 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA 447

Query: 508 ILLFFQ-MLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
            L +FQ M+  G+ PD ITYS ++ GL K K++    H+
Sbjct: 448 ALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHL 486



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 233/448 (52%), Gaps = 11/448 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++GL +    + A  +   +      P++VT N +L  L   G++  A +LF  +
Sbjct: 12  TYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM 71

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L      +V++F+ L+   C+  K+E A + +   M+    P++I YS+LIDGL KA R+
Sbjct: 72  L-DRRSHDVISFNILVTGLCRAGKIETALEFFR-KMDDRCSPNVITYSVLIDGLCKANRV 129

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +  ELL +   RG   DV+ ++ ++D       V  A +    ML+ G +PN+++Y+ L
Sbjct: 130 SQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSL 189

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GLC+  R+ +A  L   +  R   P+++TY +LIDG CK G+++D  ++  +MI +G 
Sbjct: 190 LHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG 249

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD ++ ++LINGL     + +++    ++V   + P++  +++++ G CR  R  +  +
Sbjct: 250 TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACR 309

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L + +      PDVI ++ LI G+   G +  A  L+  M   G   DV+TYS +I GL 
Sbjct: 310 LLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLC 369

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +     +   M R G  P    YN L+  L    +LD A++L  ++      P  +
Sbjct: 370 KAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAV 429

Query: 595 TYNTIICGYCSL---NSCLIDGYFKSQI 619
           TYN +I G C +   +S  +D YF+  I
Sbjct: 430 TYNILIHGMCRMERVDSAALD-YFQEMI 456



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 216/407 (53%), Gaps = 7/407 (1%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
             G  PN+VT N ++  LC N +   A  LF+ +  V   P++VT++TL++   +  KLE
Sbjct: 3   DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLE 62

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A  L+  M++     D+I ++IL+ GL +AG+++   E      DR    +V+ +S ++
Sbjct: 63  RAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLI 120

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           D       V +AV+  + M   G  P+VI+Y+IL+ GLC++ ++  A  +  ++L     
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P+L+TY+SL+ G C++ ++ D  +L  +M  RG  P+ V    LI+GL     + DA   
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
               +     P+L I+N L++G C+  +  +++ L        IKPDV+T++ +I G+  
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
              L  A  L   +  RG  PDVI YS +I GL K   +     ++++M  +G   D+  
Sbjct: 301 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVT 360

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           Y+ L++ L K   +D A  L  ++   G  P  +TYN++I G C LN
Sbjct: 361 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 407



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 146/269 (54%), Gaps = 7/269 (2%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M + G  PNV++Y+ LI GLC+      A  LF  +      PS++TY++L+DG  ++GK
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           L    +L+  M+ R    D +  ++L+ GL     +  AL FF + +     PN+  ++ 
Sbjct: 61  LERAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFF-RKMDDRCSPNVITYSV 118

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+DG C+  R +  V+L   M      PDVIT+T+L+ G+  +  +++A  +  +ML  G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             P+++TY++++HGL + + +S  L + + M   G  P++  Y  L++ L K   +  A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            +   + D+G  PD++ YN +I G C  +
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKAD 267



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 9/203 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS +I    R  ++DE+  +  Y+   G    PD++    L+  L  +  V + + L   
Sbjct: 291 YSSVIYGLCRSNRLDEACRLLLYVKSRGC--PPDVILYSTLIDGLCKAGKVDEAFDLYEV 348

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G G       Y  L++GL + G ++ A  +  ++++ G  P+ +T N ++K LC    
Sbjct: 349 MTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 408

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA-FQLYNLMMEMDLVPDLIIYS 287
           +  A  L + +      P+ VT++ LI+  C+  +++ A    +  M++  ++PD I YS
Sbjct: 409 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYS 468

Query: 288 ILIDGLFKAGRLKEGNELLLTAL 310
           IL++GL K+  L E   L+L  +
Sbjct: 469 ILLEGLKKSKDLHELRHLVLDQM 491


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 157/554 (28%), Positives = 276/554 (49%), Gaps = 28/554 (5%)

Query: 51  AIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGD 110
           A +  K    CVS      L+  L++    D+A  ++ + V++ G   N + L       
Sbjct: 49  AFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE-VVRSGVQVNVYTL------- 100

Query: 111 FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYK 168
                + +I    +  KI+ +    + M + G++  PD+V    L++       + + ++
Sbjct: 101 -----NIMINALCKNQKIENTKSFLSDMEEKGVF--PDVVTYNTLINAYCRQGLLEEAFE 153

Query: 169 LCRAMRGKGF--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           L  +M GKG   CV+ +  ++NGL + G    A  +  ++++ G  P+  T N +L   C
Sbjct: 154 LMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECC 213

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
            N  + +A  +FD +   G  P++V+FS LI    K   L++A + +  M    L PD +
Sbjct: 214 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 273

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           IY+ILI G  + G + E  ++    L++G  LDVV ++++++       +  A + +  M
Sbjct: 274 IYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEM 333

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
              G  P+  +++ LI G  + G + +A  LF  ++ R L+P ++TY++LIDGFCK  ++
Sbjct: 334 TERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 393

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL--MG---DALRFFFQSVRMTLIPNLFIFNTL 459
                L+++MI R + P+ +   +LING   MG   +A R + + V       +   NT+
Sbjct: 394 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 453

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           + G CR   A    +    M +  I PD IT+  LI G   + ++  A  L  +M   GL
Sbjct: 454 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL 513

Query: 520 TPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
            PDVITY+ I++G  + G+     L M K++ER GV PD + Y  L+N  + + NL  A 
Sbjct: 514 LPDVITYNVILNGFSRQGRMQEAELIMLKMIER-GVNPDRSTYTSLINGHVTQNNLKEAF 572

Query: 579 KLFGQLTDRGLEPD 592
           ++  ++  RG  PD
Sbjct: 573 RVHDEMLQRGFVPD 586



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 253/500 (50%), Gaps = 9/500 (1%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L+   V++G +D + EI+  +   G+ ++   +  +++ L  +  +         M  KG
Sbjct: 68  LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 127

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L+N   R+G++E AF +   +  +G  P + T N I+  LC  G+   A 
Sbjct: 128 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 187

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            + D +L +G  P+  T++ L+   C+   +  A ++++ M    +VPDL+ +S LI  L
Sbjct: 188 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 247

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G L +  +      + GL  D V+++ ++  +   G +  A++  D ML  G + +V
Sbjct: 248 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 307

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ ++ GLC++  L EA  LF ++  R + P   T+++LI+G+ K G +    +L++ 
Sbjct: 308 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 367

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           MI+R LKPD V  + LI+G      M      +   +   + PN   +  L++G C +  
Sbjct: 368 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 427

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            ++  +L+  M     +  +IT   +++G    G+   A      ML +G+ PD ITY+ 
Sbjct: 428 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 487

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+G  K +N+     +   ME +G+ PD+  YNV+LN   ++  +  A  +  ++ +RG
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547

Query: 589 LEPDIITYNTIICGYCSLNS 608
           + PD  TY ++I G+ + N+
Sbjct: 548 VNPDRSTYTSLINGHVTQNN 567



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 242/477 (50%), Gaps = 44/477 (9%)

Query: 171 RAMRGKGFCVY----EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           R ++ KG CV       L+ GL++ G ++ A+ ++++V++ G   N+ T N ++  LC N
Sbjct: 51  RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKN 110

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            +I N  S    +   G  P+VVT++TLINA+C++  LE+AF+L + M    L P +  Y
Sbjct: 111 QKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTY 170

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS----------SVMDAY-------- 328
           + +I+GL K G+      +L   L  G+  D   ++          ++MDA         
Sbjct: 171 NAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS 230

Query: 329 -------------VGI----GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
                        +G+    G + +A++ +  M N G  P+ + Y+ILI G C+ G + E
Sbjct: 231 QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSE 290

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  +  ++L +     ++TY+++++G CK   L +   L+  M +RG+ PD    + LIN
Sbjct: 291 ALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLIN 350

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           G      M  A+  F   ++  L P++  +NTL+DG C+        +L+  M    I P
Sbjct: 351 GYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 410

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           + I++ +LI G  + G +S A  L+ +M+++G    +IT + I+ G  +  N        
Sbjct: 411 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 470

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             M   G+ PD   YN L+N  IKE N+D A  L  ++ + GL PD+ITYN I+ G+
Sbjct: 471 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 527



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 229/450 (50%), Gaps = 5/450 (1%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G    V++ L+   ++   +       R +  +G   +I  CN +L  L   G +  A  
Sbjct: 24  GSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWE 83

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           ++  ++  G + NV T + +INA CK  K+E      + M E  + PD++ Y+ LI+   
Sbjct: 84  IYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC 143

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + G L+E  EL+ +   +GLK  V  ++++++     G   RA    D ML  G  P+  
Sbjct: 144 RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 203

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+IL+   C+   +++A  +F ++  + + P L+++S+LI    K+G L      + +M
Sbjct: 204 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 263

Query: 415 IKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
              GL PD V+ ++LI     NG+M +AL+   + +    + ++  +NT+++G C+ K  
Sbjct: 264 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 323

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           ++  +LF  M    + PD  T T LI G +  G+++ A+ LF  M++R L PDV+TY+ +
Sbjct: 324 SEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 383

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  KG  +     ++  M    + P+   Y +L+N       +  A +L+ ++ ++G 
Sbjct: 384 IDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 443

Query: 590 EPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           E  IIT NTI+ GYC   + +    F S +
Sbjct: 444 EATIITCNTIVKGYCRAGNAVKADEFLSNM 473



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 59/122 (48%)

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
           N   + +   +L+R       L      F  +  +GL   +   ++++ GL K   + + 
Sbjct: 22  NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +++ + R+GV  ++   N+++N L K   ++        + ++G+ PD++TYNT+I  
Sbjct: 82  WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 603 YC 604
           YC
Sbjct: 142 YC 143


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 221/400 (55%), Gaps = 31/400 (7%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +++ G  PN+ T N +++ LC  G++  A  +   +   G  PN VT++TL+ AFC+  +
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 264 LEKAFQLYNLMMEM-DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           L+ A ++ +LM E  +  P+L+ ++ +++GL KAGR++   ++    +  GL  DVV ++
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++  Y  +G +  ++  +  M   G +P+V++++ LI   C+ G L +A  L  Q+  R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            L  + +T+++LIDGFCK G L D     + M K G++P +VVC                
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP-SVVC---------------- 223

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                        +N L++G C+L R     +L   M    +KPDV+T++ +I G    G
Sbjct: 224 -------------YNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 270

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           +L SA  L  +MLK+G+ PD ITYS++I GL + K ++    +F+ M + GV PD   Y 
Sbjct: 271 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYT 330

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            L++   KE N++ AL L  ++  +G+ PD++TY+ +I G
Sbjct: 331 TLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 370



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 250/503 (49%), Gaps = 27/503 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+  + R G++D +  + + M + G    P+LV    +++ L  +  +    K+   
Sbjct: 48  YNTLVAAFCRAGELDGAERVVSLMREEG-NAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 106

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L++G  + G +  +  +  ++ QRG VP++VT   ++   C  G 
Sbjct: 107 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 166

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A +L   +   G + N VTF+ LI+ FCK+  L+ A      M +  + P ++ Y+ 
Sbjct: 167 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 226

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+G  K GR+    EL+     + +K DVV +S+++  Y  +G++  A Q   +ML  G
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP+ I+YS LI+GLC++ RL +AC LF  +L   ++P   TY++LIDG CK G +    
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           SL+D MI++G+ PD V  S+LINGL       +A R  F+      +P+   ++ LM  C
Sbjct: 347 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 406

Query: 464 CR--LKRATDTVKLFMLMGM-------------YNIKPDVITHTVLIRGIASQGSLSSAI 508
            +   K     +K F + G+              N K D   +++LI G    G++  A+
Sbjct: 407 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKAL 466

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
               QML+ G +P+  +  +++ GLF+   +    +  + +       D      L+++ 
Sbjct: 467 SFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLN 526

Query: 569 IKECNLDAALKLFGQLTDRGLEP 591
            KE N+DA + +   +   GL P
Sbjct: 527 RKEGNVDALIDVLCGMARDGLLP 549



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 229/458 (50%), Gaps = 62/458 (13%)

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCING 227
           MRG G       Y  L+    R G ++ A  +   + + G   PN+VT N ++  LC  G
Sbjct: 36  MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAG 95

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  +FD ++  G  P+VV+++TL++ +CK   L ++  +++ M +  LVPD++ ++
Sbjct: 96  RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 155

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI    KAG L++   L+    +RGL+++ V F++++D +   G +  A+   + M   
Sbjct: 156 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC 215

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V+ Y+ LI G C+ GR+  A  L  ++  +R++P ++TYS++I G+CK G L   
Sbjct: 216 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 275

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           F L   M+K+G+ PDA+  S LI GL                              C  K
Sbjct: 276 FQLNQKMLKKGVLPDAITYSSLIRGL------------------------------CEEK 305

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  D  +LF  M    ++PD  T+T LI G   +G++  A+ L  +M+++G+ PDV+TYS
Sbjct: 306 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 365

Query: 528 AIIHGLFKGKNISVGLHM-FKLMERNGVAPDIAIYNVLL--------------------N 566
            +I+GL K         + FKL   + V PD   Y+ L+                     
Sbjct: 366 VLINGLSKSARTKEAHRLLFKLYHEDPV-PDNIKYDALMLCCSKAEFKSVVALLKGFCMK 424

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L+KE     A K++  + DR  + D   Y+ +I G+C
Sbjct: 425 GLMKE-----ADKVYQSMLDRNWKLDGSVYSILIHGHC 457



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 173/363 (47%), Gaps = 31/363 (8%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  PNV T++ L+ A C   +LE+A  +   M      P+ + Y+ L+    +AG L   
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 303 NELLLTALDRG-LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             ++    + G  K ++V F+S+++     G +  A + +D M+  G  P+V+SY+ L+ 
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C+ G L E+  +F ++  R L P ++T++SLI   CK+G L    +L   M +RGL+ 
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184

Query: 422 DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + V                               F  L+DG C+     D +     M  
Sbjct: 185 NEVT------------------------------FTALIDGFCKKGFLDDALLAVEEMRK 214

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             I+P V+ +  LI G    G +  A  L  +M  + + PDV+TYS II G  K  N+  
Sbjct: 215 CGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDS 274

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
              + + M + GV PD   Y+ L+  L +E  L+ A +LF  +   G++PD  TY T+I 
Sbjct: 275 AFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 334

Query: 602 GYC 604
           G+C
Sbjct: 335 GHC 337



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 156/279 (55%), Gaps = 8/279 (2%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+  G  PNV +Y+IL++ LC +GRL EA G+ G +      P+ +TY++L+  FC++G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 404 LRDGFSLYDNMIKRG-LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
           L     +   M + G  KP+ V  + ++NGL     M  A + F + VR  L P++  +N
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           TL+ G C++    +++ +F  M    + PDV+T T LI      G+L  A+ L  QM +R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           GL  + +T++A+I G  K   +   L   + M + G+ P +  YN L+N   K   +D A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
            +L  ++  + ++PD++TY+TII GYC + +  +D  F+
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGN--LDSAFQ 277



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/292 (19%), Positives = 109/292 (37%), Gaps = 54/292 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I  Y ++G +D + ++   M   G+         L+  L +   +    +L   M 
Sbjct: 259 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 318

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT--------------- 215
             G    EF    L++G  ++G +E A  +H ++I++G +P++VT               
Sbjct: 319 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 378

Query: 216 ---------------------------CNK--------ILKRLCINGQIGNASSLFDVLL 240
                                      C+K        +LK  C+ G +  A  ++  +L
Sbjct: 379 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 438

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
               K +   +S LI+  C+   + KA   +  M+     P+      L+ GLF+ G + 
Sbjct: 439 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 498

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           E +  +   L      D     +++D     G+V   +     M   G LP+
Sbjct: 499 EADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/508 (27%), Positives = 258/508 (50%), Gaps = 19/508 (3%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK-LCR 171
           C YS L   + R+G+I+     F  +   G  ++  ++ +L++ L D+  V +    L R
Sbjct: 91  CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150

Query: 172 AMRGKGFCVYEF-----LMNGLLRKGVIENAFHMHRQVIQRG---FVPNIVTCNKILKRL 223
            M   G C+        L+ GL  +  +E A  +   + + G     PN+VT N I+  L
Sbjct: 151 RMPEFG-CMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C    +  A  +   ++  G K +VVT+ST+I+  CK   +++A  +   M++  + PD+
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + Y+ +IDGL KA  +     +L   +D+G+K DVV +++++D       V RA      
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M++    P++ +Y+ LI G    G   E      ++  R L+P ++TYS L+D  CK+GK
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNT 458
             +   ++  MI++G+KP+  +  +L++     G + D        V   + PN +IFN 
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449

Query: 459 LMDGCCRLKRA--TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           ++  C   K+A   + + +F  M  + + PDV+T+ +LI  +   G +  A+L F QM+ 
Sbjct: 450 VL--CAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIN 507

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G+TP+ + ++++++GL           +F  M   GV P++  +N ++  L  E  +  
Sbjct: 508 DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMV 567

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A +L   +   G+ P++I+YNT+I G+C
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHC 595



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 248/461 (53%), Gaps = 18/461 (3%)

Query: 162 SVGQYYKLCRAMRGK---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           +V  + ++ RA   K     C Y  L     R G IE+ F     +++ G+  N V  N+
Sbjct: 71  AVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQ 130

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPK----PNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           +L  LC   ++  A    D+LL   P+    PNVV+ +TL+   C E ++E+A +L + M
Sbjct: 131 LLNGLCDAKRVDEA---MDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTM 187

Query: 275 ME---MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
            E    +  P+++ Y+ +IDGL KA  +     +L   +D+G+KLDVV +S+++D     
Sbjct: 188 AEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKA 247

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
             V RA      M++ G  P+V++Y+ +I GLC+   +  A G+   ++ + ++P ++TY
Sbjct: 248 QAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTY 307

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVR 446
           +++IDG CK+  +     +  +MI + +KPD    + LI+G +      + +R   +   
Sbjct: 308 NTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYA 367

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             L P++  ++ L+D  C+  + T+  K+F  M    IKP+V  + +L+ G A++G+++ 
Sbjct: 368 RGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIAD 427

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
              L   M+  G++P+   ++ ++    K   I   +H+F  M ++G++PD+  Y +L++
Sbjct: 428 LTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILID 487

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            L K   +D A+  F Q+ + G+ P+ + +N+++ G C+++
Sbjct: 488 ALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVD 528



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 253/497 (50%), Gaps = 13/497 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS +I+   +   +D +  +  +M D G+   PD+V    ++  L  + +V +   + + 
Sbjct: 237 YSTIIDGLCKAQAVDRAEGVLQHMIDKGV--KPDVVTYNTIIDGLCKAQAVDRAEGVLQH 294

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  +++GL +   ++ A  + + +I +   P+I T N ++      G+
Sbjct: 295 MIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGE 354

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
                   + +   G  P+VVT+S L++  CK  K  +A +++  M+   + P++ IY I
Sbjct: 355 WKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGI 414

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ G    G + +  +LL   +  G+  +  +F+ V+ AY     +  A+  + RM   G
Sbjct: 415 LLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHG 474

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V++Y ILI  LC+ GR+ +A   F Q++   + P+ + ++SL+ G C   +     
Sbjct: 475 LSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAE 534

Query: 409 SLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M  +G++P+ V     +C+L   G +  A R      R+ + PN+  +NTL+ G 
Sbjct: 535 ELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGH 594

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C   R  +  +L  +M    +KPD+I++  L+RG    G + +A  LF +ML++G+TP  
Sbjct: 595 CLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGA 654

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TYS I+ GLF  +  S    ++  M ++G   DI  YN++LN L K   +D A K+F  
Sbjct: 655 VTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQS 714

Query: 584 LTDRGLEPDIITYNTII 600
           L  + L P+IIT+  +I
Sbjct: 715 LCSKDLRPNIITFTIMI 731



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 253/561 (45%), Gaps = 54/561 (9%)

Query: 108 LGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMS-DMGIYLSPDLV--QRLMSCLVD 159
           + +FGC       + L++      +++E++E+   M+ D G   +P++V    ++  L  
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
           + +V +   + + M  KG       Y  +++GL +   ++ A  + + +I +G  P++VT
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 271

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N I+  LC    +  A  +   ++  G KP+VVT++T+I+  CK   +++A  +   M+
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           + D+ PD+  Y+ LI G    G  KE    L     RGL  DVV +S ++D     G   
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCT 391

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV------------------------- 370
            A + +  M+  G  PNV  Y IL+ G   +G +                          
Sbjct: 392 EARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVL 451

Query: 371 ----------EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
                     EA  +F ++    L P ++TY  LID  CK G++ D    ++ MI  G+ 
Sbjct: 452 CAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVT 511

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P++VV + L+ GL        A   FF+     + PN+  FNT+M   C   +     +L
Sbjct: 512 PNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRL 571

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M    ++P+VI++  LI G    G    A  L   M+  GL PD+I+Y  ++ G  K
Sbjct: 572 IDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCK 631

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              I     +F+ M R GV P    Y+ +L  L        A +L+  +   G + DI T
Sbjct: 632 TGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYT 691

Query: 596 YNTIICGYCSLNSCLIDGYFK 616
           YN I+ G C  N   +D  FK
Sbjct: 692 YNIILNGLCKTNC--VDEAFK 710



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 231/466 (49%), Gaps = 13/466 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  Y+  G+  E V     M   G  L PD+V    L+  L  +    +  K+   
Sbjct: 342 YNCLIHGYLSTGEWKEVVRRLEEMYARG--LDPDVVTYSLLLDYLCKNGKCTEARKIFYC 399

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG      +Y  L++G   +G I +   +   ++  G  PN    N +L        
Sbjct: 400 MIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAM 459

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  +F  +   G  P+VVT+  LI+A CK  +++ A   +N M+   + P+ ++++ 
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNS 519

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ GL    R ++  EL     D+G++ +VV F+++M      G V  A +  D M   G
Sbjct: 520 LVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVG 579

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNVISY+ LI G C  GR  EA  L   ++   L+P L++Y +L+ G+CK+G++ + +
Sbjct: 580 VRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAY 639

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M+++G+ P AV  S ++ GL       +A   +   ++     +++ +N +++G 
Sbjct: 640 CLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGL 699

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+     +  K+F  +   +++P++IT T++I  +   G    A+ LF  +   GL P+V
Sbjct: 700 CKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNV 759

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           +TY  ++  + +   +    ++F  ME++G  PD  + N ++  L+
Sbjct: 760 VTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLL 805



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 181/373 (48%), Gaps = 18/373 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F R+ +  L      Y  LI+   ++G++D++V  F  M + G+  +  +   L+  L  
Sbjct: 467 FSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCT 526

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
            +   +  +L   M  +G       +  +M  L  +G +  A  +   + + G  PN+++
Sbjct: 527 VDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVIS 586

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N ++   C+ G+   A+ L DV++ VG KP+++++ TL+  +CK  +++ A+ L+  M+
Sbjct: 587 YNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREML 646

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
              + P  + YS ++ GLF   R  E  EL L  +  G + D+  ++ +++       V 
Sbjct: 647 RKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVD 706

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A + +  + +    PN+I+++I+I  L + GR  +A  LF  +    L P+++TY  ++
Sbjct: 707 EAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMM 766

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG--------------DALRFF 441
               + G L +  +L+  M K G  PD+V+ + +I  L+G              D + F 
Sbjct: 767 KNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFS 826

Query: 442 FQSVRMTLIPNLF 454
            ++   +L+ +LF
Sbjct: 827 LEASTTSLLISLF 839


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 270/554 (48%), Gaps = 67/554 (12%)

Query: 113 CD-YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQ-- 165
           CD YSF  LI+ +    K+  ++  F  ++ +G++  PD+V    L+  L   + V +  
Sbjct: 114 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLH--PDVVTFTTLLHGLCLDHRVSEAL 171

Query: 166 --YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
             ++++CR         +  LMNGL R+G +  A  +  ++++ G  P+ +T    +  +
Sbjct: 172 DLFHQICRP----DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 224 CINGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           C  G   +A +L   +  +   KPNVV +S +I+  CK+ +   +  L+  M +  + P+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           ++ Y+ +I G   +GR      LL   L+R +  +VV ++++++A+V  G    A + YD
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            ML  G +PN I+Y+ +I G C+Q RL  A  +F  +  +   P + T+++LIDG+C + 
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 407

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFN 457
           ++ DG  L   M +RGL  + V  + LI+G  L+GD   AL    Q +   + P++   N
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 467

Query: 458 TLMDGCCRLKRATDTVKLFMLM----------------------------GMYN------ 483
           TL+DG C   +  D +++F  M                            G+ N      
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 527

Query: 484 ------------IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
                       I PD IT++ +I G+  Q  L  A  +F  M  +  +P+V+T++ +I+
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 587

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G  K   +  GL +F  M R G+  D  IY  L+    K  N++ AL +F ++   G+ P
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP 647

Query: 592 DIITYNTIICGYCS 605
           D IT   ++ G+ S
Sbjct: 648 DTITIRNMLTGFWS 661



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 245/494 (49%), Gaps = 27/494 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           ++ L+    R G++ E+V +   M + G  L PD +     +  +           L R 
Sbjct: 185 FTTLMNGLCREGRVVEAVALLDRMVENG--LQPDQITYGTFVDGMCKMGDTVSALNLLRK 242

Query: 173 MR-----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           M           +Y  +++GL + G   ++ ++  ++  +G  PNIVT N ++   CI+G
Sbjct: 243 MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISG 302

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A  L   +L     PNVVT++ LINAF KE K  +A +LY+ M+   ++P+ I Y+
Sbjct: 303 RWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYN 362

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +IDG  K  RL    ++      +G   DV  F++++D Y G   +   ++    M   
Sbjct: 363 SMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRR 422

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G + N ++Y+ LI G C  G L  A  L  Q++   + P ++T ++L+DG C +GKL+D 
Sbjct: 423 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 482

Query: 408 FSLYDNMIK-----------RGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIP 451
             ++  M K            G++PD +  ++LI GL+      +A   + +     ++P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +   +++++DG C+  R  +  ++F+ MG  +  P+V+T   LI G    G +   + LF
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD-IAIYNVLLNMLIK 570
            +M +RG+  D I Y  +I+G  K  NI+  L +F+ M  +GV PD I I N+L     K
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662

Query: 571 ECNLDAALKLFGQL 584
           E  L+ A+ +   L
Sbjct: 663 E-ELERAVAMLEDL 675



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 212/417 (50%), Gaps = 10/417 (2%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +E+A  +   +++   +P+++  NK++  +    +     SL+  +     + ++ +F+ 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI  FC  +KL  A   +  + ++ L PD++ ++ L+ GL    R+ E  +L      + 
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF----HQI 177

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            + DV+ F+++M+     G V  AV   DRM+  G  P+ I+Y   + G+C+ G  V A 
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 374 GLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            L  ++  I  ++P+++ YS++IDG CK G+  D  +L+  M  +G+ P+ V  + +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                    A R   + +   + PN+  +N L++   +  +  +  +L+  M    I P+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            IT+  +I G   Q  L +A  +F+ M  +G +PDV T++ +I G    K I  G+ +  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            M R G+  +   YN L++      +L+AAL L  Q+   G+ PDI+T NT++ G C
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 190/389 (48%), Gaps = 13/389 (3%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  LF  +L   P P+V+ F+ L+ A  +  + +    LY  M    +  D+  ++ILI
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
                  +L             GL  DVV F++++        V  A+  + ++      
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR---- 179

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V++++ L+ GLC++GR+VEA  L  +++   L+P  +TY + +DG CK G      +L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 411 YDNMIK-RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
              M +   +KP+ V+ S +I+GL       D+   F +     + PN+  +N ++ G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
              R +   +L   M    I P+V+T+  LI     +G    A  L+ +ML RG+ P+ I
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+++I G  K   +     MF LM   G +PD+  +  L++       +D  ++L  ++
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 585 TDRGLEPDIITYNTIICGYC---SLNSCL 610
             RGL  + +TYNT+I G+C    LN+ L
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAAL 448


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 243/488 (49%), Gaps = 17/488 (3%)

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM--RGKGFCVYEF--LM 185
           +++EI   M ++G+  S   V  L   L+     G  +KL + +  RG   C Y F  ++
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
            G  RKG I     +   + +    PN    N ++   CI G+  +A + F++++  G  
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P VVTF+T+INAFCKE  + +A +L++ + EM   P+ I+Y+ L++G  K   + + N L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG----GFLPNVISYSILIK 361
                 +G+  D + F+ ++  +   G      +  DR+L      G LP+   + I + 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYG----REEDGDRLLKDISVLGLLPDRSLFDISVS 239

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GLC  GRL EA      +L + L PS++ ++S+I  + ++G     F  Y  M+  GL P
Sbjct: 240 GLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTP 299

Query: 422 DAVVCSLL-----INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
               CS L     ING + +A     Q +   L  N   F  L+D   +         L+
Sbjct: 300 SPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLW 359

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    I PDV+  +  I G++ QG +  A  +F +ML++GL P+   Y+++I G  K 
Sbjct: 360 GEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKC 419

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             ++  L + K+M   G+ PDI   N+++  L K+  + +A+ +F  +   GL PDIITY
Sbjct: 420 GKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITY 479

Query: 597 NTIICGYC 604
           NT+I GYC
Sbjct: 480 NTLINGYC 487



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 209/422 (49%), Gaps = 14/422 (3%)

Query: 112 GCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           GC+     ++ +I  + + G + E+ ++F  + +MG   +  +   LM+  V    + Q 
Sbjct: 121 GCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA 180

Query: 167 YKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
             L   MR KG       +  L++G  + G  E+   + + +   G +P+    +  +  
Sbjct: 181 NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSG 240

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC  G++  A      +L  G  P+++ F+++I A+ +    +KAF+ Y LM+   L P 
Sbjct: 241 LCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 300

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
               S L+ GL   GRL+E  EL+   +++GL ++ + F+ ++D +   GDV  A   + 
Sbjct: 301 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 360

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M   G  P+V+++S  I GL +QG + EA  +F ++L + L P+   Y+SLI GFCK G
Sbjct: 361 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG 420

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
           KL +   L   M  RGL PD    +++I GL     M  A+  F    +  L P++  +N
Sbjct: 421 KLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYN 480

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           TL++G C+     +   L   M      PD+ T+ + I G  S   ++ A+L+  +++  
Sbjct: 481 TLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSA 540

Query: 518 GL 519
           G+
Sbjct: 541 GI 542



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 26/322 (8%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLM 185
           G++DE++E    M + G  LSP ++          NSV   Y     +  K F  Y+ ++
Sbjct: 245 GRLDEAMEFLMDMLEKG--LSPSIIA--------FNSVIAAYSQA-GLEDKAFEAYKLMV 293

Query: 186 N---------------GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           +               GL   G ++ A  +  Q+I++G   N +    +L +    G + 
Sbjct: 294 HFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVV 353

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A SL+  +   G  P+VV FS  I+   K+  +E+A+ ++  M+   L+P+   Y+ LI
Sbjct: 354 GAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLI 413

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K G+L E  +L      RGL  D+   + ++      G +  A+  +  M   G  
Sbjct: 414 CGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLS 473

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++I+Y+ LI G C+   +V A  L  ++      P L TY+  I GFC S ++     +
Sbjct: 474 PDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLM 533

Query: 411 YDNMIKRGLKPDAVVCSLLING 432
            D ++  G+   +  C   +N 
Sbjct: 534 LDELVSAGILSFSFACPPTLNA 555



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 62/142 (43%)

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           R+    +  KLF  +     +P   T + +I G   +G +     L   M K    P+  
Sbjct: 33  RVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAF 92

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            Y+ +I+        S  L  F LM   G  P +  +N ++N   KE N+  A KLF  L
Sbjct: 93  AYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL 152

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
            + G  P+ I YNT++ GY  +
Sbjct: 153 KEMGFSPNAIMYNTLMNGYVKM 174


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 157/554 (28%), Positives = 276/554 (49%), Gaps = 28/554 (5%)

Query: 51  AIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGD 110
           A +  K    CVS      L+  L++    D+A  ++ + V++ G   N + L       
Sbjct: 206 AFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE-VVRSGVQVNVYTL------- 257

Query: 111 FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYK 168
                + +I    +  KI+ +    + M + G++  PD+V    L++       + + ++
Sbjct: 258 -----NIMINALCKNQKIENTKSFLSDMEEKGVF--PDVVTYNTLINAYCRQGLLEEAFE 310

Query: 169 LCRAMRGKGF--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           L  +M GKG   CV+ +  ++NGL + G    A  +  ++++ G  P+  T N +L   C
Sbjct: 311 LMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECC 370

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
            N  + +A  +FD +   G  P++V+FS LI    K   L++A + +  M    L PD +
Sbjct: 371 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 430

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           IY+ILI G  + G + E  ++    L++G  LDVV ++++++       +  A + +  M
Sbjct: 431 IYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEM 490

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
              G  P+  +++ LI G  + G + +A  LF  ++ R L+P ++TY++LIDGFCK  ++
Sbjct: 491 TERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 550

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL--MG---DALRFFFQSVRMTLIPNLFIFNTL 459
                L+++MI R + P+ +   +LING   MG   +A R + + V       +   NT+
Sbjct: 551 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 610

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           + G CR   A    +    M +  I PD IT+  LI G   + ++  A  L  +M   GL
Sbjct: 611 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL 670

Query: 520 TPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
            PDVITY+ I++G  + G+     L M K++ER GV PD + Y  L+N  + + NL  A 
Sbjct: 671 LPDVITYNVILNGFSRQGRMQEAELIMLKMIER-GVNPDRSTYTSLINGHVTQNNLKEAF 729

Query: 579 KLFGQLTDRGLEPD 592
           ++  ++  RG  PD
Sbjct: 730 RVHDEMLQRGFVPD 743



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 253/500 (50%), Gaps = 9/500 (1%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L+   V++G +D + EI+  +   G+ ++   +  +++ L  +  +         M  KG
Sbjct: 225 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 284

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L+N   R+G++E AF +   +  +G  P + T N I+  LC  G+   A 
Sbjct: 285 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 344

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            + D +L +G  P+  T++ L+   C+   +  A ++++ M    +VPDL+ +S LI  L
Sbjct: 345 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 404

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G L +  +      + GL  D V+++ ++  +   G +  A++  D ML  G + +V
Sbjct: 405 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 464

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ ++ GLC++  L EA  LF ++  R + P   T+++LI+G+ K G +    +L++ 
Sbjct: 465 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 524

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           MI+R LKPD V  + LI+G      M      +   +   + PN   +  L++G C +  
Sbjct: 525 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 584

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            ++  +L+  M     +  +IT   +++G    G+   A      ML +G+ PD ITY+ 
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+G  K +N+     +   ME +G+ PD+  YNV+LN   ++  +  A  +  ++ +RG
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704

Query: 589 LEPDIITYNTIICGYCSLNS 608
           + PD  TY ++I G+ + N+
Sbjct: 705 VNPDRSTYTSLINGHVTQNN 724



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 280/598 (46%), Gaps = 87/598 (14%)

Query: 58  THNCV----SSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKT-YNFFRLFRDSLGDFG 112
           T NC     S  + + +IH+L++S     A  V  +MV + G +          + G+ G
Sbjct: 122 TSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCG 181

Query: 113 CD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
            +   +  L+  YV+  K+ E  E F                                  
Sbjct: 182 SNPLVFDLLVRTYVQARKLREGCEAF---------------------------------- 207

Query: 170 CRAMRGKGFCVY----EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
            R ++ KG CV       L+ GL++ G ++ A+ ++++V++ G   N+ T N ++  LC 
Sbjct: 208 -RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK 266

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           N +I N  S    +   G  P+VVT++TLINA+C++  LE+AF+L + M    L P +  
Sbjct: 267 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFT 326

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS----------SVMDAY------- 328
           Y+ +I+GL K G+      +L   L  G+  D   ++          ++MDA        
Sbjct: 327 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP 386

Query: 329 --------------VGI----GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
                         +G+    G + +A++ +  M N G  P+ + Y+ILI G C+ G + 
Sbjct: 387 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 446

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           EA  +  ++L +     ++TY+++++G CK   L +   L+  M +RG+ PD    + LI
Sbjct: 447 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 506

Query: 431 NGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           NG      M  A+  F   ++  L P++  +NTL+DG C+        +L+  M    I 
Sbjct: 507 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 566

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P+ I++ +LI G  + G +S A  L+ +M+++G    +IT + I+ G  +  N       
Sbjct: 567 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 626

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              M   G+ PD   YN L+N  IKE N+D A  L  ++ + GL PD+ITYN I+ G+
Sbjct: 627 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 684



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 224/435 (51%), Gaps = 5/435 (1%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G    V++ L+   ++   +       R +  +G   +I  CN +L  L   G +  A  
Sbjct: 181 GSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWE 240

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           ++  ++  G + NV T + +INA CK  K+E      + M E  + PD++ Y+ LI+   
Sbjct: 241 IYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC 300

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + G L+E  EL+ +   +GLK  V  ++++++     G   RA    D ML  G  P+  
Sbjct: 301 RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 360

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+IL+   C+   +++A  +F ++  + + P L+++S+LI    K+G L      + +M
Sbjct: 361 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 420

Query: 415 IKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
              GL PD V+ ++LI     NG+M +AL+   + +    + ++  +NT+++G C+ K  
Sbjct: 421 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 480

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           ++  +LF  M    + PD  T T LI G +  G+++ A+ LF  M++R L PDV+TY+ +
Sbjct: 481 SEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 540

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  KG  +     ++  M    + P+   Y +L+N       +  A +L+ ++ ++G 
Sbjct: 541 IDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 600

Query: 590 EPDIITYNTIICGYC 604
           E  IIT NTI+ GYC
Sbjct: 601 EATIITCNTIVKGYC 615


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 155/554 (27%), Positives = 275/554 (49%), Gaps = 28/554 (5%)

Query: 51  AIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGD 110
           A +  K    CVS      L+  L++    D+A  ++ + V++ G   N + L       
Sbjct: 310 AFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE-VVRSGVQVNVYTL------- 361

Query: 111 FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYK 168
                + +I    +  KI+ +    + M + G++  PD+V    L++       + + ++
Sbjct: 362 -----NIMINALCKNQKIENTKSFLSDMEEKGVF--PDVVTYNTLINAYCRQGLLEEAFE 414

Query: 169 LCRAMRGKGF--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           L  +M GKG   CV+ +  ++NGL + G    A  +  ++++ G  P+  T N +L   C
Sbjct: 415 LMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECC 474

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
            N  + +A  +FD +   G  P++V+FS LI    K   L++A + +  M    L PD +
Sbjct: 475 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 534

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           IY+ILI G  + G + E  ++    L++G  LDVV ++++++       +  A + +  M
Sbjct: 535 IYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEM 594

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
              G  P+  +++ LI G  + G + +A  LF  ++ R L+P ++TY++LIDGFCK  ++
Sbjct: 595 TERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 654

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
                L+++MI R + P+ +   +LING      + +A R + + V       +   NT+
Sbjct: 655 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 714

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           + G CR   A    +    M +  I PD IT+  LI G   + ++  A  L  +M   GL
Sbjct: 715 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL 774

Query: 520 TPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
            PDVITY+ I++G  + G+     L M K++ER GV PD + Y  L+N  + + NL  A 
Sbjct: 775 LPDVITYNVILNGFSRQGRMQEAELIMLKMIER-GVNPDRSTYTSLINGHVTQNNLKEAF 833

Query: 579 KLFGQLTDRGLEPD 592
           ++  ++  RG  PD
Sbjct: 834 RVHDEMLQRGFVPD 847



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 279/598 (46%), Gaps = 87/598 (14%)

Query: 58  THNCV----SSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG-KTYNFFRLFRDSLGDFG 112
           T NC     S  + + +IH+L++S     A  V  +MV + G            + G+ G
Sbjct: 226 TSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCG 285

Query: 113 CD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
            +   +  L+  YV+  K+ E  E F                                  
Sbjct: 286 SNPLVFDLLVRTYVQARKLREGCEAF---------------------------------- 311

Query: 170 CRAMRGKGFCVY----EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
            R ++ KG CV       L+ GL++ G ++ A+ ++++V++ G   N+ T N ++  LC 
Sbjct: 312 -RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK 370

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           N +I N  S    +   G  P+VVT++TLINA+C++  LE+AF+L + M    L P +  
Sbjct: 371 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFT 430

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS----------SVMDAY------- 328
           Y+ +I+GL K G+      +L   L  G+  D   ++          ++MDA        
Sbjct: 431 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP 490

Query: 329 --------------VGI----GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
                         +G+    G + +A++ +  M N G  P+ + Y+ILI G C+ G + 
Sbjct: 491 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 550

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           EA  +  ++L +     ++TY+++++G CK   L +   L+  M +RG+ PD    + LI
Sbjct: 551 EALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 610

Query: 431 NGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           NG      M  A+  F   ++  L P++  +NTL+DG C+        +L+  M    I 
Sbjct: 611 NGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 670

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P+ I++ +LI G  + G +S A  L+ +M+++G    +IT + I+ G  +  N       
Sbjct: 671 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 730

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              M   G+ PD   YN L+N  IKE N+D A  L  ++ + GL PD+ITYN I+ G+
Sbjct: 731 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 788



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 252/500 (50%), Gaps = 9/500 (1%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L+   V++G +D + EI+  +   G+ ++   +  +++ L  +  +         M  KG
Sbjct: 329 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 388

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L+N   R+G++E AF +   +  +G  P + T N I+  LC  G+   A 
Sbjct: 389 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 448

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            + D +L +G  P+  T++ L+   C+   +  A ++++ M    +VPDL+ +S LI  L
Sbjct: 449 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 508

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G L +  +      + GL  D V+++ ++  +   G +  A++  D ML  G   +V
Sbjct: 509 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDV 568

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ ++ GLC++  L EA  LF ++  R + P   T+++LI+G+ K G +    +L++ 
Sbjct: 569 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEM 628

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           MI+R LKPD V  + LI+G      M      +   +   + PN   +  L++G C +  
Sbjct: 629 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 688

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            ++  +L+  M     +  +IT   +++G    G+   A      ML +G+ PD ITY+ 
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 748

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+G  K +N+     +   ME +G+ PD+  YNV+LN   ++  +  A  +  ++ +RG
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808

Query: 589 LEPDIITYNTIICGYCSLNS 608
           + PD  TY ++I G+ + N+
Sbjct: 809 VNPDRSTYTSLINGHVTQNN 828



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 222/435 (51%), Gaps = 5/435 (1%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G    V++ L+   ++   +       R +  +G   +I  CN +L  L   G +  A  
Sbjct: 285 GSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWE 344

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           ++  ++  G + NV T + +INA CK  K+E      + M E  + PD++ Y+ LI+   
Sbjct: 345 IYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC 404

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + G L+E  EL+ +   +GLK  V  ++++++     G   RA    D ML  G  P+  
Sbjct: 405 RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 464

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+IL+   C+   +++A  +F ++  + + P L+++S+LI    K+G L      + +M
Sbjct: 465 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 524

Query: 415 IKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
              GL PD V+ ++LI     NG+M +AL+   + +      ++  +NT+++G C+ K  
Sbjct: 525 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKML 584

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           ++  +LF  M    + PD  T T LI G    G+++ A+ LF  M++R L PDV+TY+ +
Sbjct: 585 SEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 644

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  KG  +     ++  M    + P+   Y +L+N       +  A +L+ ++ ++G 
Sbjct: 645 IDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 704

Query: 590 EPDIITYNTIICGYC 604
           E  IIT NTI+ GYC
Sbjct: 705 EATIITCNTIVKGYC 719


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 257/494 (52%), Gaps = 25/494 (5%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----C 179
           R   ID + E++  M + GI  +      ++        V +  +L   M+  G      
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NGL   G +E A  + +++++ G   +  T + +++  C  GQ+  AS L + +
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G  P +VT++T++   CK  ++  A +L ++M+  +L+PDL+ Y+ LI G  + G +
Sbjct: 287 LSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 346

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   L      RGL   VV +++++D    +GD+  A++  D M+  G  P+V +++IL
Sbjct: 347 GEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTIL 406

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           ++G C+ G L  A  LF ++L R L+P    Y + I G  K G     F + + M+ RG 
Sbjct: 407 VRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 466

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT-----LMDGCCRLKRA 469
            PD +  ++ I+GL     + +A     + +   L+P+   + +     LM G  R  RA
Sbjct: 467 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARA 526

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
                +F+ M    I P V+T+TVLI   A +G L  AIL FF+M ++G+ P+VITY+A+
Sbjct: 527 -----VFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNAL 581

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL---DAALKLFGQLTD 586
           I+GL K + +      F  M+  G++P+   Y +L+N   + CNL     AL+L+  + D
Sbjct: 582 INGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILIN---ENCNLGHWQEALRLYKDMLD 638

Query: 587 RGLEPDIITYNTII 600
           R ++PD  T++ ++
Sbjct: 639 REIQPDSCTHSALL 652



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 237/436 (54%), Gaps = 13/436 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++   ++G ++ A  +  Q+ + G +PN VT N ++  L  +G++  A  L   +
Sbjct: 192 TYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEM 251

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L +G + +  T+  LI  +C++ +L++A +L   M+    VP L+ Y+ ++ GL K GR+
Sbjct: 252 LRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRV 311

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +  +LL   +++ L  D+V +++++  Y  +G++G A   +  +   G +P+V++Y+ L
Sbjct: 312 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTL 371

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+ G L  A  L  +++    +P + T++ L+ GFCK G L     L+D M+ RGL
Sbjct: 372 IDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGL 431

Query: 420 KPD--AVVCSLLINGLMGDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRL---KRATD 471
           +PD  A +  ++    +GD  + F     M      P+L  +N  +DG  +L   K A++
Sbjct: 432 QPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASE 491

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            VK  +  G+    PD +T+T +I      G L  A  +F +ML +G+ P V+TY+ +IH
Sbjct: 492 LVKKMLYNGLV---PDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIH 548

Query: 532 GL-FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
               +G+     LH F++ E+ GV P++  YN L+N L K   +D A K F ++  +G+ 
Sbjct: 549 SYAVRGRLKLAILHFFEMHEK-GVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGIS 607

Query: 591 PDIITYNTIICGYCSL 606
           P+  TY  +I   C+L
Sbjct: 608 PNKYTYTILINENCNL 623



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 232/475 (48%), Gaps = 44/475 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +++++ + GK+ E++++   M  MG   +      L++ L  S  + Q  +L + M 
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML 252

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G  V    Y+ L+ G   KG ++ A  +  +++ RG VP +VT N I+  LC  G++ 
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVS 312

Query: 231 NASSLFDVLL-----------------------------------LVGPKPNVVTFSTLI 255
           +A  L DV++                                     G  P+VVT++TLI
Sbjct: 313 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLI 372

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +  C+   L+ A +L + M++    PD+  ++IL+ G  K G L    EL    L+RGL+
Sbjct: 373 DGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQ 432

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D   + + +   + +GD  +A    + ML  GF P++I+Y++ I GL + G L EA  L
Sbjct: 433 PDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASEL 492

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
             ++L   L P  +TY+S+I     +G LR   +++  M+ +G+ P  V  ++LI+    
Sbjct: 493 VKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAV 552

Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            G +  A+  FF+     + PN+  +N L++G C++++     K F  M    I P+  T
Sbjct: 553 RGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYT 612

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           +T+LI    + G    A+ L+  ML R + PD  T+SA++  L K     V  H+
Sbjct: 613 YTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVVRHL 667



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 181/363 (49%), Gaps = 18/363 (4%)

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLI----IYSILIDGLFKAGRLKEGNELLLTALDRG 313
           + K++ LEK   ++  M+   ++PDL     +  +L D   +   +    E+    ++ G
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRD---RDSSIDVAREVYNVMVECG 185

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++  VV +++++D++   G V  A+Q   +M   G LPN ++Y++L+ GL   G L +A 
Sbjct: 186 IRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAK 245

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L  ++L   LE S  TY  LI G+C+ G+L +   L + M+ RG  P  V  + ++ GL
Sbjct: 246 ELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGL 305

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                + DA +     V   L+P+L  +NTL+ G  RL    +   LF  +    + P V
Sbjct: 306 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSV 365

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+  LI G+   G L  A+ L  +M+K G  PDV T++ ++ G  K  N+ +   +F  
Sbjct: 366 VTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDE 425

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG---QLTDRGLEPDIITYNTIICGYCS 605
           M   G+ PD   Y   +  ++ E  L    K FG   ++  RG  PD+ITYN  I G   
Sbjct: 426 MLNRGLQPDRFAY---ITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 482

Query: 606 LNS 608
           L +
Sbjct: 483 LGN 485



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG---FCKSGKL 404
           GF  + ++Y++++  L + G +  A  +  +V+  ++E  ++    L      + K   L
Sbjct: 76  GFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSML 135

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQS-VRMTLIPNLFIFNT 458
                ++  M+ +G+ PD   C+ ++  L       D  R  +   V   + P +  +NT
Sbjct: 136 EKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNT 195

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++D  C+  +  + ++L + M      P+ +T+ VL+ G++  G L  A  L  +ML+ G
Sbjct: 196 MLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLG 255

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           L     TY  +I G  +   +     + + M   G  P +  YN ++  L K   +  A 
Sbjct: 256 LEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDAR 315

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           KL   + ++ L PD+++YNT+I GY  L +
Sbjct: 316 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGN 345


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 221/401 (55%), Gaps = 31/401 (7%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            +++ G  PN+ T N +++ LC  G++  A  +   +   G  PN VT++TL+ AFC+  
Sbjct: 142 SMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG 201

Query: 263 KLEKAFQLYNLMMEM-DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
           +L+ A ++ +LM E  +  P+L+ ++ +++GL KAGR++   ++    +  GL  DVV +
Sbjct: 202 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 261

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++  Y  +G +  ++  +  M   G +P+V++++ LI   C+ G L +A  L  Q+  
Sbjct: 262 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 321

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           R L  + +T+++LIDGFCK G L D     + M K G++P +VVC               
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP-SVVC--------------- 365

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
                         +N L++G C+L R     +L   M    +KPDV+T++ +I G    
Sbjct: 366 --------------YNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G+L SA  L  +MLK+G+ PD ITYS++I GL + K ++    +F+ M + GV PD   Y
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             L++   KE N++ AL L  ++  +G+ PD++TY+ +I G
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 512



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 250/503 (49%), Gaps = 27/503 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+  + R G++D +  + + M + G    P+LV    +++ L  +  +    K+   
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEG-NAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L++G  + G +  +  +  ++ QRG VP++VT   ++   C  G 
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A +L   +   G + N VTF+ LI+ FCK+  L+ A      M +  + P ++ Y+ 
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+G  K GR+    EL+     + +K DVV +S+++  Y  +G++  A Q   +ML  G
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP+ I+YS LI+GLC++ RL +AC LF  +L   ++P   TY++LIDG CK G +    
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           SL+D MI++G+ PD V  S+LINGL       +A R  F+      +P+   ++ LM  C
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 548

Query: 464 CR--LKRATDTVKLFMLMGM-------------YNIKPDVITHTVLIRGIASQGSLSSAI 508
            +   K     +K F + G+              N K D   +++LI G    G++  A+
Sbjct: 549 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKAL 608

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
               QML+ G +P+  +  +++ GLF+   +    +  + +       D      L+++ 
Sbjct: 609 SFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLN 668

Query: 569 IKECNLDAALKLFGQLTDRGLEP 591
            KE N+DA + +   +   GL P
Sbjct: 669 RKEGNVDALIDVLCGMARDGLLP 691



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 229/458 (50%), Gaps = 62/458 (13%)

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCING 227
           MRG G       Y  L+    R G ++ A  +   + + G   PN+VT N ++  LC  G
Sbjct: 178 MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAG 237

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  +FD ++  G  P+VV+++TL++ +CK   L ++  +++ M +  LVPD++ ++
Sbjct: 238 RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 297

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI    KAG L++   L+    +RGL+++ V F++++D +   G +  A+   + M   
Sbjct: 298 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC 357

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V+ Y+ LI G C+ GR+  A  L  ++  +R++P ++TYS++I G+CK G L   
Sbjct: 358 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 417

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           F L   M+K+G+ PDA+  S LI GL                              C  K
Sbjct: 418 FQLNQKMLKKGVLPDAITYSSLIRGL------------------------------CEEK 447

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  D  +LF  M    ++PD  T+T LI G   +G++  A+ L  +M+++G+ PDV+TYS
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507

Query: 528 AIIHGLFKGKNISVGLHM-FKLMERNGVAPDIAIYNVLL--------------------N 566
            +I+GL K         + FKL   + V PD   Y+ L+                     
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPV-PDNIKYDALMLCCSKAEFKSVVALLKGFCMK 566

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L+KE +     K++  + DR  + D   Y+ +I G+C
Sbjct: 567 GLMKEAD-----KVYQSMLDRNWKLDGSVYSILIHGHC 599



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 188/398 (47%), Gaps = 32/398 (8%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G+ P++   N +L  L  +  + +A      +L  G  PNV T++ L+ A C   +LE+A
Sbjct: 113 GYAPSVPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMD 326
             +   M      P+ + Y+ L+    +AG L     ++    + G  K ++V F+S+++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G +  A + +D M+  G  P+V+SY+ L+ G C+ G L E+  +F ++  R L P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
            ++T++SLI   CK+G L    +L   M +RGL+ + V                      
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT--------------------- 330

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
                    F  L+DG C+     D +     M    I+P V+ +  LI G    G +  
Sbjct: 331 ---------FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 381

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L  +M  + + PDV+TYS II G  K  N+     + + M + GV PD   Y+ L+ 
Sbjct: 382 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 441

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L +E  L+ A +LF  +   G++PD  TY T+I G+C
Sbjct: 442 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 156/279 (55%), Gaps = 8/279 (2%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           ML  G  PNV +Y+IL++ LC +GRL EA G+ G +      P+ +TY++L+  FC++G+
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 404 LRDGFSLYDNMIKRG-LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
           L     +   M + G  KP+ V  + ++NGL     M  A + F + VR  L P++  +N
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           TL+ G C++    +++ +F  M    + PDV+T T LI      G+L  A+ L  QM +R
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           GL  + +T++A+I G  K   +   L   + M + G+ P +  YN L+N   K   +D A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
            +L  ++  + ++PD++TY+TII GYC + +  +D  F+
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGN--LDSAFQ 419



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 181/371 (48%), Gaps = 46/371 (12%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P+V  ++ ++ A   +A L  A +  + M+   + P++  Y+IL+  L   GRL+E 
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
                                       +G VG        M   G  PN ++Y+ L+  
Sbjct: 172 ----------------------------VGVVGD-------MRGAGCAPNAVTYNTLVAA 196

Query: 363 LCQQGRLVEACGLFGQVLIRR---LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
            C+ G L  A  +    L+R     +P+L+T++S+++G CK+G++     ++D M++ GL
Sbjct: 197 FCRAGELDGAERVVS--LMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGL 254

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V  + L++G      + ++L  F +  +  L+P++  F +L+   C+       V 
Sbjct: 255 APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVA 314

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M    ++ + +T T LI G   +G L  A+L   +M K G+ P V+ Y+A+I+G  
Sbjct: 315 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 374

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   + +   + + ME   V PD+  Y+ +++   K  NLD+A +L  ++  +G+ PD I
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434

Query: 595 TYNTIICGYCS 605
           TY+++I G C 
Sbjct: 435 TYSSLIRGLCE 445



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/292 (19%), Positives = 109/292 (37%), Gaps = 54/292 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I  Y ++G +D + ++   M   G+         L+  L +   +    +L   M 
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT--------------- 215
             G    EF    L++G  ++G +E A  +H ++I++G +P++VT               
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520

Query: 216 ---------------------------CNK--------ILKRLCINGQIGNASSLFDVLL 240
                                      C+K        +LK  C+ G +  A  ++  +L
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
               K +   +S LI+  C+   + KA   +  M+     P+      L+ GLF+ G + 
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 640

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           E +  +   L      D     +++D     G+V   +     M   G LP+
Sbjct: 641 EADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 216/410 (52%), Gaps = 5/410 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           + RQ+   G  P++ T   ++  LC   ++  A S    +L +G +P+  TF+TLI   C
Sbjct: 92  LSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC 151

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            E K+ +A  L++ M+     P+++ Y  LI+GL K G       LL +      + +VV
Sbjct: 152 VEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVV 211

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           VFS+++D+      V  A   +  M+  G  PN+++Y+ LI GLC+         L  ++
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
           +  ++ P + T ++++D  CK G + +   + D MI RG++P+ V  + L++G      +
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEV 331

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A++ F   V    + N+  +NTL++G C+++     + LF  M    + P+ +T+  L
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+   G L  AI LF +M+ RG  PD++TY  +   L K +++   + + K +E +  
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            PDI IY  +L+ + +   L+ A  LF  L+ +GL+P++ TYN +I G C
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 254/509 (49%), Gaps = 17/509 (3%)

Query: 87  FDKMVIQFGKTYNFFRLFR-----DSLGDFGCDYSF--LIENYVRIGKIDESVEIFAYMS 139
           F++++    KT +   L       DS G     Y+   +I +   + ++D +    A + 
Sbjct: 73  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIE 195
            +G          L+  L     +G+   L   M G+GF      Y  L+NGL + G   
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  + R + Q    PN+V  + ++  LC + Q+  A ++F  ++  G  PN+VT+++LI
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +  CK  + +    L N M++  ++PD+   + ++D L K G + E ++++   + RG++
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            +VV ++++MD +    +V  AV+ +D M++   + NVISY+ LI G C+   + +A  L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F ++  + L P+ +TY++LI G C  G+L+D  SL+  M+ RG  PD V    L + L  
Sbjct: 373 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK 432

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              +  A+            P++ I+ T++DG CR     D   LF  +    ++P+V T
Sbjct: 433 NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWT 492

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           + ++I G+  QG L+ A  LF +M K G +P+  TY+ I  G  +       + + + M 
Sbjct: 493 YNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 552

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             G + D++   +L+ ML  +  LD ++K
Sbjct: 553 ARGFSVDVSTTTLLVGMLSDD-GLDQSVK 580



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 222/431 (51%), Gaps = 6/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+ GL  +G I  A H+  ++I  GF PN+VT   ++  LC  G    A  L   +
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 201

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                +PNVV FSTLI++ CK+ ++ +AF +++ M+   + P+++ Y+ LI GL K    
Sbjct: 202 EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 261

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           K    L+   +D  +  DV   ++V+DA    G V  A    D M++ G  PNV++Y+ L
Sbjct: 262 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 321

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G C +  +  A  +F  ++ +    ++++Y++LI+G+CK   +     L++ M ++ L
Sbjct: 322 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ V  + LI+GL     + DA+  F + V    IP+L  + TL D  C+ +     + 
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   +   N  PD+  +T ++ G+   G L  A  LF  +  +GL P+V TY+ +IHGL 
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   ++    +F  M +NG +P+   YN++    ++       ++L  ++  RG   D+ 
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561

Query: 595 TYNTIICGYCS 605
           T  T++ G  S
Sbjct: 562 T-TTLLVGMLS 571



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 238/492 (48%), Gaps = 9/492 (1%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--VYEF-- 183
           +DE++  F  M       S     RL++ +  +        L R M   G    VY    
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++N L     ++ AF    ++++ G  P+  T   +++ LC+ G+IG A  LFD ++  G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNVVT+ TLIN  CK      A +L   M + +  P+++++S LID L K  ++ E  
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +    + +G+  ++V ++S++     + +        + M++   +P+V + + ++  L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G + EA  +   ++ R +EP+++TY++L+DG C   ++     ++D M+ +    + 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  + LING      +  A+  F +  R  L PN   +NTL+ G C + R  D + LF  
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      PD++T+  L   +     L  A+ L   +      PD+  Y+ I+ G+ +   
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F  +   G+ P++  YN++++ L K+  L  A KLF ++   G  P+  TYN 
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 599 IICGYCSLNSCL 610
           I  G+   N  L
Sbjct: 531 ITRGFLRNNEAL 542


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 270/554 (48%), Gaps = 67/554 (12%)

Query: 113 CD-YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQ-- 165
           CD YSF  LI+ +    K+  ++  F  ++ +G++  PD+V    L+  L   + V +  
Sbjct: 114 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLH--PDVVTFTTLLHGLCLDHRVSEAL 171

Query: 166 --YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
             ++++CR         +  LMNGL R+G +  A  +  ++++ G  P+ +T    +  +
Sbjct: 172 DLFHQICRP----DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 224 CINGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           C  G   +A +L   +  +   KPNVV +S +I+  CK+ +   +  L+  M +  + P+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           ++ Y+ +I G   +GR      LL   L+R +  +VV ++++++A+V  G    A + YD
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            ML  G +PN I+Y+ +I G C+Q RL  A  +F  +  +   P + T+++LIDG+C + 
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 407

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFN 457
           ++ DG  L   M +RGL  + V  + LI+G  L+GD   AL    Q +   + P++   N
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 467

Query: 458 TLMDGCCRLKRATDTVKLFMLM----------------------------GMYN------ 483
           TL+DG C   +  D +++F  M                            G+ N      
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 527

Query: 484 ------------IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
                       I PD IT++ +I G+  Q  L  A  +F  M  +  +P+V+T++ +I+
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 587

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G  K   +  GL +F  M R G+  D  IY  L+    K  N++ AL +F ++   G+ P
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP 647

Query: 592 DIITYNTIICGYCS 605
           D IT   ++ G+ S
Sbjct: 648 DTITIRNMLTGFWS 661



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 248/502 (49%), Gaps = 27/502 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           ++ L+    R G++ E+V +   M + G  L PD +     +  +           L R 
Sbjct: 185 FTTLMNGLCREGRVVEAVALLDRMVENG--LQPDQITYGTFVDGMCKMGDTVSALNLLRK 242

Query: 173 MR-----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           M           +Y  +++GL + G   ++ ++  ++  +G  PNIVT N ++   CI+G
Sbjct: 243 MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISG 302

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A  L   +L     PNVVT++ LINAF KE K  +A +LY+ M+   ++P+ I Y+
Sbjct: 303 RWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYN 362

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +IDG  K  RL    ++      +G   DV  F++++D Y G   +   ++    M   
Sbjct: 363 SMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRR 422

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G + N ++Y+ LI G C  G L  A  L  Q++   + P ++T ++L+DG C +GKL+D 
Sbjct: 423 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 482

Query: 408 FSLYDNMIK-----------RGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIP 451
             ++  M K            G++PD +  ++LI GL+      +A   + +     ++P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +   +++++DG C+  R  +  ++F+ MG  +  P+V+T   LI G    G +   + LF
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD-IAIYNVLLNMLIK 570
            +M +RG+  D I Y  +I+G  K  NI+  L +F+ M  +GV PD I I N+L     K
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662

Query: 571 ECNLDAALKLFGQLTDRGLEPD 592
           E  L+ A+ +   L    LE +
Sbjct: 663 E-ELERAVAMLEDLQRYQLEDE 683



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 236/473 (49%), Gaps = 56/473 (11%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM  ++R    +    +++++ ++    +I +   ++K  C   ++  A S F  L  +G
Sbjct: 87  LMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLG 146

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVTF+TL++  C + ++ +A  L++ +      PD++ ++ L++GL + GR+ E  
Sbjct: 147 LHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAV 202

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDV----------------------------- 334
            LL   ++ GL+ D + + + +D    +GD                              
Sbjct: 203 ALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDG 262

Query: 335 ----GRAVQTYD---RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               GR   +++    M + G  PN+++Y+ +I G C  GR   A  L  ++L R++ P+
Sbjct: 263 LCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPN 322

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++TY++LI+ F K GK  +   LYD M+ RG+ P+ +  + +I+G      +  A   F+
Sbjct: 323 VVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 382

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                   P++F F TL+DG C  KR  D ++L   M    +  + +T+  LI G    G
Sbjct: 383 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 442

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER----------- 551
            L++A+ L  QM+  G+ PD++T + ++ GL     +   L MFK M++           
Sbjct: 443 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPF 502

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           NGV PD+  YN+L+  LI E     A +L+ ++  RG+ PD ITY+++I G C
Sbjct: 503 NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 212/417 (50%), Gaps = 10/417 (2%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +E+A  +   +++   +P+++  NK++  +    +     SL+  +     + ++ +F+ 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI  FC  +KL  A   +  + ++ L PD++ ++ L+ GL    R+ E  +L      + 
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF----HQI 177

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            + DV+ F+++M+     G V  AV   DRM+  G  P+ I+Y   + G+C+ G  V A 
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 374 GLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            L  ++  I  ++P+++ YS++IDG CK G+  D  +L+  M  +G+ P+ V  + +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                    A R   + +   + PN+  +N L++   +  +  +  +L+  M    I P+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            IT+  +I G   Q  L +A  +F+ M  +G +PDV T++ +I G    K I  G+ +  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            M R G+  +   YN L++      +L+AAL L  Q+   G+ PDI+T NT++ G C
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 190/389 (48%), Gaps = 13/389 (3%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  LF  +L   P P+V+ F+ L+ A  +  + +    LY  M    +  D+  ++ILI
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
                  +L             GL  DVV F++++        V  A+  + ++      
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR---- 179

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V++++ L+ GLC++GR+VEA  L  +++   L+P  +TY + +DG CK G      +L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 411 YDNMIK-RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
              M +   +KP+ V+ S +I+GL       D+   F +     + PN+  +N ++ G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
              R +   +L   M    I P+V+T+  LI     +G    A  L+ +ML RG+ P+ I
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+++I G  K   +     MF LM   G +PD+  +  L++       +D  ++L  ++
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 585 TDRGLEPDIITYNTIICGYC---SLNSCL 610
             RGL  + +TYNT+I G+C    LN+ L
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAAL 448


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 216/410 (52%), Gaps = 5/410 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           + RQ+   G  P++ T   ++  LC   ++  A S    +L +G +P+  TF+TLI   C
Sbjct: 92  LSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC 151

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            E K+ +A  L++ M+     P+++ Y  LI+GL K G       LL +      + +VV
Sbjct: 152 VEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVV 211

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           VFS+++D+      V  A   +  M+  G  PN+++Y+ LI GLC+         L  ++
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
           +  ++ P + T ++++D  CK G + +   + D MI RG++P+ V  + L++G      +
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEV 331

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A++ F   V    + N+  +NTL++G C+++     + LF  M    + P+ +T+  L
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+   G L  AI LF +M+ RG  PD++TY  +   L K +++   + + K +E +  
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            PDI IY  +L+ + +   L+ A  LF  L+ +GL+P++ TYN +I G C
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 254/509 (49%), Gaps = 17/509 (3%)

Query: 87  FDKMVIQFGKTYNFFRLFR-----DSLGDFGCDYSF--LIENYVRIGKIDESVEIFAYMS 139
           F++++    KT +   L       DS G     Y+   +I +   + ++D +    A + 
Sbjct: 73  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIE 195
            +G          L+  L     +G+   L   M G+GF      Y  L+NGL + G   
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  + R + Q    PN+V  + ++  LC + Q+  A ++F  ++  G  PN+VT+++LI
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +  CK  + +    L N M++  ++PD+   + ++D L K G + E ++++   + RG++
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            +VV ++++MD +    +V  AV+ +D M++   + NVISY+ LI G C+   + +A  L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F ++  + L P+ +TY++LI G C  G+L+D  SL+  M+ RG  PD V    L + L  
Sbjct: 373 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK 432

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              +  A+            P++ I+ T++DG CR     D   LF  +    ++P+V T
Sbjct: 433 NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWT 492

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           + ++I G+  QG L+ A  LF +M K G +P+  TY+ I  G  +       + + + M 
Sbjct: 493 YNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 552

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             G + D++   +L+ ML  +  LD ++K
Sbjct: 553 ARGFSVDVSTTTLLVGMLSDD-GLDQSVK 580



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 222/431 (51%), Gaps = 6/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+ GL  +G I  A H+  ++I  GF PN+VT   ++  LC  G    A  L   +
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 201

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                +PNVV FSTLI++ CK+ ++ +AF +++ M+   + P+++ Y+ LI GL K    
Sbjct: 202 EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 261

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           K    L+   +D  +  DV   ++V+DA    G V  A    D M++ G  PNV++Y+ L
Sbjct: 262 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 321

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G C +  +  A  +F  ++ +    ++++Y++LI+G+CK   +     L++ M ++ L
Sbjct: 322 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ V  + LI+GL     + DA+  F + V    IP+L  + TL D  C+ +     + 
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   +   N  PD+  +T ++ G+   G L  A  LF  +  +GL P+V TY+ +IHGL 
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   ++    +F  M +NG +P+   YN++    ++       ++L  ++  RG   D+ 
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561

Query: 595 TYNTIICGYCS 605
           T  T++ G  S
Sbjct: 562 T-TTLLVGMLS 571



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 238/492 (48%), Gaps = 9/492 (1%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--VYEF-- 183
           +DE++  F  M       S     RL++ +  +        L R M   G    VY    
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++N L     ++ AF    ++++ G  P+  T   +++ LC+ G+IG A  LFD ++  G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNVVT+ TLIN  CK      A +L   M + +  P+++++S LID L K  ++ E  
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +    + +G+  ++V ++S++     + +        + M++   +P+V + + ++  L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G + EA  +   ++ R +EP+++TY++L+DG C   ++     ++D M+ +    + 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  + LING      +  A+  F +  R  L PN   +NTL+ G C + R  D + LF  
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      PD++T+  L   +     L  A+ L   +      PD+  Y+ I+ G+ +   
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F  +   G+ P++  YN++++ L K+  L  A KLF ++   G  P+  TYN 
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 599 IICGYCSLNSCL 610
           I  G+   N  L
Sbjct: 531 ITRGFLRNNEAL 542


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 248/496 (50%), Gaps = 10/496 (2%)

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR-- 174
           F+  N   I  ID+++  F  M  M    S     + +              LC  M   
Sbjct: 59  FVSNNSTNIS-IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLF 117

Query: 175 GKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G    VY    L+N L R   ++ A  +  ++ + G  P   T N ++  LC  G+I  A
Sbjct: 118 GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEA 177

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             LF+ ++  G +PNV++++T+IN  CK      A  ++  M +    PD++ Y+ +ID 
Sbjct: 178 VELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDS 237

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L K   + +  E L   LDRG+  +V  ++ ++  +  +G +  A + +  M+    +P+
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
            ++ +IL+ GLC++G + EA  +F  +  + +EP++ TY++L+DG+C    + +   +++
Sbjct: 298 TVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFE 357

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            MI++G  P     ++LING      M +A     +     L P+   ++TLM G C+  
Sbjct: 358 IMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFG 417

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  + + +F  M  Y + P+++T+++L+ G    G L  A+ L   M ++ L P+++ ++
Sbjct: 418 RPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHT 477

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I G+F    + V   +F  +  +G+ P I  Y V++  L+KE   D A  LF ++ D 
Sbjct: 478 ILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 537

Query: 588 GLEPDIITYNTIICGY 603
           G  P+  +YN +I G+
Sbjct: 538 GFLPNSCSYNVMIQGF 553



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 150/592 (25%), Positives = 277/592 (46%), Gaps = 69/592 (11%)

Query: 16  NKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAI-QFFKWTHNCVSSPNIAQLIHVL 74
           N  + S + T+IS    + A A    +++ N P P++ +F K+  +       + ++ + 
Sbjct: 56  NGGFVSNNSTNIS---IDDALASFYRMVRMN-PRPSVAEFGKFLGSFAKKKQYSTVVSLC 111

Query: 75  LQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEI 134
            Q D+              FG T+N + L            + LI    R+  +D +V I
Sbjct: 112 NQMDL--------------FGVTHNVYSL------------NVLINCLCRLNHVDFAVSI 145

Query: 135 FAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVI 194
              M  +GI+ +                                  +  L+NGL  +G I
Sbjct: 146 LGKMFKLGIHPTAS-------------------------------TFNALINGLCNEGKI 174

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           + A  +  ++++RG  PN+++ N I+  LC  G    A  +F  +   G KP+VVT++T+
Sbjct: 175 KEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTI 234

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I++ CK+  +  A +  + M++  + P++  Y+ ++ G    G+L E   L    + R +
Sbjct: 235 IDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDV 294

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             D V  + ++D     G V  A   ++ M   G  PN+ +Y+ L+ G C Q  + EA  
Sbjct: 295 MPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKK 354

Query: 375 LFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           +F +++IR+   P + +Y+ LI+GFCKS ++ +  SL   M  + L PD V  S L+ GL
Sbjct: 355 VF-EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 413

Query: 434 M-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                  +AL  F +     L+PNL  ++ L+DG C+     + +KL   M    ++P++
Sbjct: 414 CQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNI 473

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           + HT+LI G+   G L  A  LF ++   G+ P + TY+ +I GL K         +F+ 
Sbjct: 474 VHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRK 533

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           ME +G  P+   YNV++   ++  +   A++L  ++  +    ++ T+  ++
Sbjct: 534 MEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 198/404 (49%), Gaps = 50/404 (12%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           GFV N  T          N  I +A + F  ++ + P+P+V  F   + +F K+ +    
Sbjct: 58  GFVSNNST----------NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTV 107

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L N   +MDL                                 G+  +V   + +++ 
Sbjct: 108 VSLCN---QMDLF--------------------------------GVTHNVYSLNVLINC 132

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
              +  V  AV    +M   G  P   +++ LI GLC +G++ EA  LF +++ R  EP+
Sbjct: 133 LCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPN 192

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           +++Y+++I+G CK+G       ++  M + G KPD V  + +I+ L     + DA+ F  
Sbjct: 193 VISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLS 252

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           + +   + PN+F +N ++ G C L +  +  +LF  M   ++ PD +T T+L+ G+  +G
Sbjct: 253 EMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEG 312

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +S A L+F  M ++G+ P++ TY+A++ G    + ++    +F++M R G AP +  YN
Sbjct: 313 MVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYN 372

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +L+N   K   +D A  L  ++  + L PD +TY+T++ G C  
Sbjct: 373 ILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 277/548 (50%), Gaps = 28/548 (5%)

Query: 80  RDVASHVFDKMVIQFGKTYNFF---------RLFRDSLGDFGCD-----YSFLIENYVRI 125
           RD+   V  +M+++     NF          +LFR ++   GC      YS+++  + ++
Sbjct: 224 RDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFR-AMVKSGCKPDATIYSYMVLAHCKL 282

Query: 126 GKIDESVEIFAYMS-DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR---GKGFCVY 181
             +DE+ ++F  M+ +    L+       +S L  S  + Q ++ CR M+        VY
Sbjct: 283 ENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVY 342

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           + L+  L+  G I+ A     ++  R   P+  TC+ +++ LC  G++ +A SL + ++ 
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIK 402

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME--MDLVPDLIIYSILIDGLFKAGRL 299
            G  P++ T S LIN  CK  K+++A +    M             Y+ L++ L KA ++
Sbjct: 403 RGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKV 462

Query: 300 KEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            +   +  T + +R    DVV +S ++D +  I ++GRA + Y +M++   +PNV +Y+ 
Sbjct: 463 HQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNA 522

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            + GL ++GR+ +A G++ +++     P ++TYS+LI GF  + K      L++ MI RG
Sbjct: 523 FLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRG 582

Query: 419 LKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
            +P+AV  + L++GL       +A   F + V     P+   + TL+ G C + +    V
Sbjct: 583 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAV 642

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           ++F  M      PDV+ +  L++G    G    A  LF  M+ R   PD ++++ +I GL
Sbjct: 643 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGL 702

Query: 534 FKGKNISVGLHMFKLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
            K K +   + +F+ ME++ G +PD+  YN L+  L  E  L  A+K+F ++    L PD
Sbjct: 703 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 762

Query: 593 IITYNTII 600
              +N ++
Sbjct: 763 PHAFNVLL 770



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 155/592 (26%), Positives = 271/592 (45%), Gaps = 59/592 (9%)

Query: 51  AIQFFKW-----------THNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYN 99
           A+ FF+W           T+NC+       L  ++   D++  A  VF+KMV Q G   N
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCL-------LDKLIRHRDLKQ-AGQVFEKMVAQ-GVVPN 163

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
            F             Y+ L+++       DE+V  F  M D G   S  L Q++  CL  
Sbjct: 164 GF------------TYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKA 211

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIEN----AFHMHRQVIQRGFVPNIVT 215
           +   G++ ++      K   V   L   LL   VI++    A  + R +++ G  P+   
Sbjct: 212 TGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATI 271

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKP-NVVTFSTLINAFCKEAKLEKAFQLYNLM 274
            + ++   C    +  A  LF  + +    P N V ++  ++  CK  K+E+AF+    M
Sbjct: 272 YSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM 331

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            E  L     +Y +LI  L ++GR+ +  E  L    R ++       SV+      G V
Sbjct: 332 QE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRV 390

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT---Y 391
             A+   + M+  G+ P++ ++S+LI  LC+  ++ EA   F Q + R++     +   Y
Sbjct: 391 DSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEA-QEFLQGMDRKISSRSSSCFSY 449

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMI-KRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           +SL++  CK+ K+   F+++  M+ +R   PD V  S+LI+G      +G A + + Q +
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
            +  +PN+  +N  ++G  R  R  D   ++  M      PDVIT++ LI G +      
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  LF  M+ RG  P+ +TY+ ++HGL K         +F+ M   G  PD   Y  LL
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLL 629

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
                   ++ A+++F ++  +G +PD++ YN           CL+ G+F++
Sbjct: 630 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYN-----------CLLKGFFRA 670



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 187/362 (51%), Gaps = 15/362 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV---QRLMSCLVDSNSVGQYYKLCR 171
           +S LI    +  KI E+ E    M D  I            L++ L  +  V Q + +  
Sbjct: 412 HSMLINELCKADKIQEAQEFLQGM-DRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFS 470

Query: 172 AMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            M  +   V     Y  L++G  +   +  A  +++Q+I    VPN+ T N  L  L   
Sbjct: 471 TMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRK 530

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+I +A  +++ ++  G  P+V+T+STLI+ F    K ++A +L+  M+     P+ + Y
Sbjct: 531 GRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTY 590

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + L+ GL K  +  E +EL    ++RG   D V +++++  +  +G + +AV+ +D M++
Sbjct: 591 NCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVS 650

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P+V++Y+ L+KG  + G+  EA  LF  ++ R+ +P  ++++ +IDG  K+ +L D
Sbjct: 651 KGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDD 710

Query: 407 GFSLYDNMIK-RGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLM 460
              +++ M +  G  PD V  + LI GL G     +A++ F +  R+ L P+   FN L+
Sbjct: 711 AVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 770

Query: 461 DG 462
           + 
Sbjct: 771 EA 772



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 167/388 (43%), Gaps = 10/388 (2%)

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           G A + F  L     K +V T++ L++   +   L++A Q++  M+   +VP+   Y++L
Sbjct: 111 GEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVL 170

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           +          E        +D+G K    ++  V +     G  G   + + R L    
Sbjct: 171 VQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRV 230

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
              ++    L+     Q + +EA  LF  ++    +P    YS ++   CK   L + F 
Sbjct: 231 AVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFK 290

Query: 410 LYDNMIKRGLKP-DAVVCSLLINGLMGDA-LRFFFQSVRMTLIPNLFIFNTLMDGCCRL- 466
           L+  M      P + V  +  ++GL     +   F++ R T+  +L     + D   RL 
Sbjct: 291 LFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACR-TMQESLSSSQPVYDMLIRLL 349

Query: 467 ---KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
               R     +  + +   NI+P   T   +I+ +   G + SA+ L   M+KRG  PD+
Sbjct: 350 IESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDM 409

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERN--GVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            T+S +I+ L K   I       + M+R     +     YN LLN L K   +  A  +F
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIF 469

Query: 582 GQL-TDRGLEPDIITYNTIICGYCSLNS 608
             + ++R   PD+++Y+ +I G+C ++ 
Sbjct: 470 STMVSERSFVPDVVSYSILIDGFCKIDE 497



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 121/278 (43%), Gaps = 7/278 (2%)

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           D G A+  +  +    F  +V +Y+ L+  L +   L +A  +F +++ + + P+  TY+
Sbjct: 109 DGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYA 168

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA-----VVCSLLINGLMGDALRFFFQSVRM 447
            L+   C      +    +  M+ +G KP +     V   L   G  G+  R F + +  
Sbjct: 169 VLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEK 228

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            +   + +   L+       +A +  KLF  M     KPD   ++ ++       +L  A
Sbjct: 229 RVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEA 288

Query: 508 ILLFFQMLKRGLTP-DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
             LF +M      P + + ++A + GL K   I       + M+ + ++    +Y++L+ 
Sbjct: 289 FKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVYDMLIR 347

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +LI+   +D A +   ++  R ++P   T +++I   C
Sbjct: 348 LLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELC 385


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 131/528 (24%), Positives = 257/528 (48%), Gaps = 26/528 (4%)

Query: 90  MVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDES----VEIFAYMSDMGIYL 145
           ++ QF + Y      R +  D  C  S  I + + +G    +    V   + +   G+  
Sbjct: 16  LIQQFHREYK-----RGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVESSGLNG 70

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRK----GVIENAFHMH 201
                + L S   +SN  G Y  +        F + +   N  LR+    G +E  F   
Sbjct: 71  RAQKFETLSSGYSNSNGNGHYSSV-----NSSFALEDVESNNHLRQMVRTGELEEGFKFL 125

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
             ++  G VP+I+ C  +++  C  G+   A+ + ++L   G  P+V+T++ +I+ +CK 
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKA 185

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            ++  A  + +    M + PD++ Y+ ++  L  +G+LK+  E+L   L R    DV+ +
Sbjct: 186 GEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           + +++A      VG A++  D M + G  P+V++Y++L+ G+C++GRL EA      +  
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGD 436
              +P+++T++ ++   C +G+  D   L  +M+++G  P  V  ++LIN     GL+G 
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A+    +  +    PN   +N L+ G C+ K+    ++    M      PD++T+  ++ 
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
            +   G +  A+ +  Q+  +G +P +ITY+ +I GL K       + +   M    + P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           D   Y+ L+  L +E  +D A+K F +    G+ P+ +T+N+I+ G C
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 221/424 (52%), Gaps = 8/424 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+ G  R G    A  +   +   G VP+++T N ++   C  G+I NA S+ D + +  
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV-- 200

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVT++T++ + C   KL++A ++ + M++ D  PD+I Y+ILI+   +   +    
Sbjct: 201 -SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +LL    DRG   DVV ++ +++     G +  A++  + M + G  PNVI+++I+++ +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C  GR ++A  L   +L +   PS++T++ LI+  C+ G L     + + M + G +P++
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  + L++G      M  A+ +  + V     P++  +NT++   C+  +  D V++   
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +      P +IT+  +I G+A  G    AI L  +M  + L PD ITYS+++ GL +   
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   +  F   ER G+ P+   +N ++  L K    D A+     + +RG +P+  +Y  
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559

Query: 599 IICG 602
           +I G
Sbjct: 560 LIEG 563



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 242/480 (50%), Gaps = 20/480 (4%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLS-PDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG-- 177
           VR G+++E    F ++ +M  + + PD++    L+          +  K+   + G G  
Sbjct: 113 VRTGELEEG---FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 169

Query: 178 --FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASS 234
                Y  +++G  + G I NA      V+ R  V P++VT N IL+ LC +G++  A  
Sbjct: 170 PDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           + D +L     P+V+T++ LI A C+++ +  A +L + M +    PD++ Y++L++G+ 
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K GRL E  + L      G + +V+  + ++ +    G    A +    ML  GF P+V+
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +++ILI  LC++G L  A  +  ++     +P+ L+Y+ L+ GFCK  K+       + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 415 IKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + RG  PD V     + +L  +G + DA+    Q       P L  +NT++DG  +  + 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              +KL   M   ++KPD IT++ L+ G++ +G +  AI  F +  + G+ P+ +T+++I
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           + GL K +     +     M   G  P+   Y +L+  L  E     AL+L  +L ++GL
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 211/445 (47%), Gaps = 74/445 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  Y + G+I+ ++ +   MS     +SPD+V                        
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMS-----VSPDVV------------------------ 205

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++  L   G ++ A  +  +++QR   P+++T   +++  C +  +G+A  
Sbjct: 206 -----TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L D +   G  P+VVT++ L+N  CKE +L++A +  N M      P++I ++I++  + 
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG------------------- 335
             GR  +  +LL   L +G    VV F+ +++     G +G                   
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380

Query: 336 ----------------RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
                           RA++  +RM++ G  P++++Y+ ++  LC+ G++ +A  +  Q+
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
             +   P L+TY+++IDG  K+GK      L D M  + LKPD +  S L+ GL     +
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++FF +  RM + PN   FN++M G C+ ++    +   + M     KP+  ++T+L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560

Query: 495 IRGIASQGSLSSAILLFFQMLKRGL 519
           I G+A +G    A+ L  ++  +GL
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 158/325 (48%), Gaps = 13/325 (4%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLV 158
           D + D GC      Y+ L+    + G++DE+++    M   G    P+++    ++  + 
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC--QPNVITHNIILRSMC 320

Query: 159 DSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
            +       KL   M  KGF      +  L+N L RKG++  A  +  ++ Q G  PN +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           + N +L   C   ++  A    + ++  G  P++VT++T++ A CK+ K+E A ++ N +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
                 P LI Y+ +IDGL KAG+  +  +LL     + LK D + +SS++      G V
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A++ +      G  PN ++++ ++ GLC+  +   A      ++ R  +P+  +Y+ L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+G    G  ++   L + +  +GL
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 8/211 (3%)

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLF 454
           ++G+L +GF   +NM+  G  PD + C+ LI G         A +          +P++ 
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +N ++ G C+     + + +   M   ++ PDV+T+  ++R +   G L  A+ +  +M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           L+R   PDVITY+ +I    +   +   + +   M   G  PD+  YNVL+N + KE  L
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           D A+K    +   G +P++IT+N I+   CS
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 222/419 (52%), Gaps = 5/419 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL + G    A  +   ++ +G  P++ T N I+  LC  G+   A+ L   +
Sbjct: 165 TFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM 224

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +PN+VT+STLI++ C++  + +A  +++ M    + PD+  Y+ LI GL K  R 
Sbjct: 225 EEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRW 284

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE + LL       +  D+V F+ ++D +   G V  A+     M   G  PNV++YS L
Sbjct: 285 KEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSL 344

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G      +VEA  LF  ++ +  +P++ +Y+ LI+G+CK+ ++ +   L++ MI +GL
Sbjct: 345 MYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGL 404

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ V  + LI+G      + +A   F        +P+LF ++ L+DG C+        +
Sbjct: 405 TPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFR 464

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    +KP+++ +T+L+  +   G+   A  LF ++  +GL P V  Y+ II+GL 
Sbjct: 465 LFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLC 524

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           K   +   L  F+ ME +G  PD   YNV++  L++  +   AL L G++ DRG   D+
Sbjct: 525 KEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 234/454 (51%), Gaps = 13/454 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           S  +  + ++ ++D    + A +  +G  L P +V    L++ L       Q  +L   M
Sbjct: 132 SIFMNCFCQLQRVDLGFSVLAKVIKLG--LQPTIVTFTTLINGLCKVGEFAQAVELFDDM 189

Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             KG       Y  ++NGL + G    A  + +++ + G  PN+VT + ++  LC +  +
Sbjct: 190 VAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLV 249

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  +F  +   G  P++ T+++LI   CK ++ ++A  L N M  ++++PD++ +++L
Sbjct: 250 NEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVL 309

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           +D   K G++ E   +L T  + G++ +VV +SS+M  Y    DV  A + +  M+  G 
Sbjct: 310 VDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGC 369

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            PN+ SY+ILI G C+  R+ EA  LF +++ + L P+ ++Y++LI GFC+ GKLR+   
Sbjct: 370 KPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQD 429

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L+ NM   G  PD    S+L++G      +G A R F       L PNL ++  L+   C
Sbjct: 430 LFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMC 489

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +     D  KLF  + +  ++P V  +T +I G+  +G L  A+  F  M   G  PD I
Sbjct: 490 KSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEI 549

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
           +Y+ II GL + K+ S  L +   M   G   D+
Sbjct: 550 SYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 235/471 (49%), Gaps = 18/471 (3%)

Query: 147 PDLVQ--RLMSCLVDSNSVGQYY----KLCRAMRGKGFC----VYEFLMNGLLRKGVIEN 196
           P ++Q  +L+S +V    +GQYY     L + M   G           MN   +   ++ 
Sbjct: 90  PCIIQFAKLLSAIV---KMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDL 146

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
            F +  +VI+ G  P IVT   ++  LC  G+   A  LFD ++  G +P+V T++T+IN
Sbjct: 147 GFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIIN 206

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK  +   A  L   M E    P+++ YS LID L +   + E  ++      +G+  
Sbjct: 207 GLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISP 266

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D+  ++S++           A    + M +   +P+++++++L+   C++G++ EA G+ 
Sbjct: 267 DIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVL 326

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
             +    +EP+++TYSSL+ G+     + +   L+  MI +G KP+    ++LING    
Sbjct: 327 KTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKA 386

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + +A++ F + +   L PN   +NTL+ G C+L +  +   LF  M      PD+ T+
Sbjct: 387 KRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTY 446

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           ++L+ G   QG L  A  LF  M    L P+++ Y+ ++H + K  N      +F  +  
Sbjct: 447 SILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFV 506

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            G+ P + +Y  ++N L KE  LD AL+ F  +   G  PD I+YN II G
Sbjct: 507 QGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRG 557



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 225/434 (51%), Gaps = 8/434 (1%)

Query: 179 CVYEF--LMNGLLRKGVIENA-FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           C+ +F  L++ +++ G   +    + +Q+   G  PNI T +  +   C   ++    S+
Sbjct: 91  CIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSV 150

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
              ++ +G +P +VTF+TLIN  CK  +  +A +L++ M+     PD+  Y+ +I+GL K
Sbjct: 151 LAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCK 210

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G       LL    + G + ++V +S+++D+      V  A+  +  M   G  P++ +
Sbjct: 211 IGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFT 270

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI+GLC+  R  EA  L  ++    + P ++T++ L+D FCK GK+ +   +   M 
Sbjct: 271 YTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMT 330

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G++P+ V  S L+ G      + +A + F   +     PN+F +N L++G C+ KR  
Sbjct: 331 EMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRID 390

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + ++LF  M    + P+ +++  LI G    G L  A  LF  M   G  PD+ TYS ++
Sbjct: 391 EAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILL 450

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G  K   +     +F+ M+   + P++ +Y +L++ + K  N   A KLF +L  +GL+
Sbjct: 451 DGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQ 510

Query: 591 PDIITYNTIICGYC 604
           P +  Y TII G C
Sbjct: 511 PHVQLYTTIINGLC 524



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 192/379 (50%), Gaps = 31/379 (8%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM-DLVPDLIIYS 287
           I +A + F+ +L   P P ++ F+ L++A  K  +        +  ME+  L P++   S
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I ++   +  R+  G  +L   +  GL+  +V F+++++    +G+  +AV+ +D M+  
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V +Y+ +I GLC+ G    A GL  ++     +P+++TYS+LID  C+   + + 
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             ++  M  +G+ PD                              +F + +L+ G C+  
Sbjct: 253 LDIFSYMKAKGISPD------------------------------IFTYTSLIQGLCKFS 282

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  +   L   M   NI PD++T  VL+     +G +S A+ +   M + G+ P+V+TYS
Sbjct: 283 RWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYS 342

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           ++++G     ++     +F +M   G  P+I  YN+L+N   K   +D A++LF ++  +
Sbjct: 343 SLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQ 402

Query: 588 GLEPDIITYNTIICGYCSL 606
           GL P+ ++YNT+I G+C L
Sbjct: 403 GLTPNNVSYNTLIHGFCQL 421



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 159/361 (44%), Gaps = 78/361 (21%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           YS LI++  R   ++E+++IF+YM   GI  SPD+     L+  L   +   +   L   
Sbjct: 236 YSTLIDSLCRDRLVNEALDIFSYMKAKGI--SPDIFTYTSLIQGLCKFSRWKEASALLNE 293

Query: 173 MRG----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M           +  L++   ++G +  A  + + + + G  PN+VT + ++    +   
Sbjct: 294 MTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTD 353

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL--------- 279
           +  A  LF V++  G KPN+ +++ LIN +CK  ++++A QL+N M+   L         
Sbjct: 354 VVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNT 413

Query: 280 --------------------------VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
                                     +PDL  YSIL+DG  K G L              
Sbjct: 414 LIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYL-------------- 459

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
                                G+A + +  M +    PN++ Y+IL+  +C+ G   +A 
Sbjct: 460 ---------------------GKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDAR 498

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            LF ++ ++ L+P +  Y+++I+G CK G L +    + NM   G  PD +  +++I GL
Sbjct: 499 KLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGL 558

Query: 434 M 434
           +
Sbjct: 559 L 559



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 111/224 (49%), Gaps = 6/224 (2%)

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQ-SVR 446
           TY    D       + D  + +++M+ R   P  +  + L++ +  MG         S +
Sbjct: 59  TYQHKNDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQ 118

Query: 447 MTLI---PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
           M L+   PN++  +  M+  C+L+R      +   +    ++P ++T T LI G+   G 
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
            + A+ LF  M+ +G  PDV TY+ II+GL K    +    + K ME  G  P++  Y+ 
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++ L ++  ++ AL +F  +  +G+ PDI TY ++I G C  +
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFS 282


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 255/494 (51%), Gaps = 25/494 (5%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC---- 179
           R   ID + E++  M + GI  +      ++        V +  +L   M+  G      
Sbjct: 179 RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDV 238

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NGL   G +E A  + + +++ G   ++ T + +++  C  GQI  AS L + +
Sbjct: 239 TYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM 298

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G  P VVT++T++   CK  ++  A +L ++M+  +L+PDL+ Y+ LI G  + G +
Sbjct: 299 LSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 358

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   L      R L   VV +++++D    +GD+  A++  D M+  G  P+V +++  
Sbjct: 359 GEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTF 418

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           ++G C+ G L  A  LF ++L R L+P    Y + I G  K G     F + + M+ RG 
Sbjct: 419 VRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 478

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT-----LMDGCCRLKRA 469
            PD +  ++ I+GL     + +A     + +   L+P+   + +     LM G  R  RA
Sbjct: 479 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARA 538

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
                LF+ M    I P V+T+TVLI   A +G L  AIL FF+M ++G+ P+VITY+A+
Sbjct: 539 -----LFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNAL 593

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL---DAALKLFGQLTD 586
           I+GL K + +    + F  M+  G++P+   Y +L+N   + CNL     AL+L+  + D
Sbjct: 594 INGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILIN---ENCNLGHWQEALRLYKDMLD 650

Query: 587 RGLEPDIITYNTII 600
           R ++PD  T+ +++
Sbjct: 651 REIQPDSCTHRSLL 664



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 160/584 (27%), Positives = 295/584 (50%), Gaps = 30/584 (5%)

Query: 46  NNPTPAIQFFKWTHNCV----SSPNIAQLIHVLLQSDMRDVASHVFDKMV---IQFGKTY 98
           N P  A++FF+W         S  + + ++ +L ++ +   A  V +K+V   ++ G   
Sbjct: 59  NRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENG-VI 117

Query: 99  NFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSC 156
           +       S+         L+  YV+   +++ + +F  M   G  L PD+    R++  
Sbjct: 118 DVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKG--LLPDVKNCNRVLRL 175

Query: 157 LVD-SNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
           L D  N++    ++   M   G C     Y  +++   +KG+++ A  +  Q+   G  P
Sbjct: 176 LRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSP 235

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           N VT N ++  L  +G++  A  L   +L +G + +V T+  LI  +C++ ++E+A +L 
Sbjct: 236 NDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLG 295

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M+    VP ++ Y+ ++ GL K GR+ +  +LL   +++ L  D+V +++++  Y  +
Sbjct: 296 EEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRL 355

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G++G A   +  +      P+V++Y+ LI GLC+ G L  A  L  +++    +P + T+
Sbjct: 356 GNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTF 415

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD--AVVCSLLINGLMGDALRFFFQSVRMT- 448
           ++ + GFCK G L     L+D M+ RGL+PD  A +  ++    +GD  + F     M  
Sbjct: 416 TTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 475

Query: 449 --LIPNLFIFNTLMDGCCRL---KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
               P+L  +N  +DG  +L   K A++ VK  +  G+    PD +T+T +I      G 
Sbjct: 476 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV---PDHVTYTSIIHAHLMAGH 532

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGL-FKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           L  A  LF +ML +G+ P V+TY+ +IH    +G+     LH F++ E+ GV P++  YN
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK-GVHPNVITYN 591

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            L+N L K   +D A   F ++  +G+ P+  TY  +I   C+L
Sbjct: 592 ALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNL 635



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 233/475 (49%), Gaps = 44/475 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +++++ + G + E++++   M  MG   +      L++ L  S  + Q  +L + M 
Sbjct: 205 YNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDML 264

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G  V    Y+ L+ G   KG IE A  +  +++ RG VP +VT N I+  LC  G++ 
Sbjct: 265 RLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVS 324

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  L DV++     P++V+++TLI  + +   + +AF L+  +    L P ++ Y+ LI
Sbjct: 325 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLI 384

Query: 291 DGLFKAG------RLKE------------------------GN-----ELLLTALDRGLK 315
           DGL + G      RLK+                        GN     EL    L+RGL+
Sbjct: 385 DGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQ 444

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D   + + +   + +GD  +A    + ML  GF P++I+Y++ I GL + G L EA  L
Sbjct: 445 PDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASEL 504

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
             ++L   L P  +TY+S+I     +G LR   +L+  M+ +G+ P  V  ++LI+    
Sbjct: 505 VKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAV 564

Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            G +  A+  FF+     + PN+  +N L++G C++++       F  M    I P+  T
Sbjct: 565 RGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYT 624

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           +T+LI    + G    A+ L+  ML R + PD  T+ +++  L K   + V  H+
Sbjct: 625 YTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHL 679



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 227/477 (47%), Gaps = 51/477 (10%)

Query: 146 SPDLVQRLMSCLVDSNSVG-QYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHM 200
            P L+ R+++ + +   V  ++++   A R  GF      Y  +++ L R G++ +A+ +
Sbjct: 46  EPKLLVRVLNTVRNRPVVALRFFRW--AERQTGFKRSEISYSVILDILARNGLMRSAYCV 103

Query: 201 HRQVIQ---RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
             +V+       V ++V+ +++         + +   + D+LL +               
Sbjct: 104 MEKVVSVKMENGVIDVVSSSEV--------SMPSVKLILDLLLWI--------------- 140

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLI----IYSILIDGLFKAGRLKEGNELLLTALDRG 313
           + K++ LEK   ++  M+   L+PD+     +  +L D   +   +    E+    ++ G
Sbjct: 141 YVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRD---RDNNIDVAREVYNVMVECG 197

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +   VV +++++D++   G V  A+Q   +M   G  PN ++Y++L+ GL   G + +A 
Sbjct: 198 ICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAK 257

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L   +L   LE S+ TY  LI G+C+ G++ +   L + M+ RG  P  V  + ++ GL
Sbjct: 258 ELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGL 317

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                + DA +     V   L+P+L  +NTL+ G  RL    +   LF  +   ++ P V
Sbjct: 318 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSV 377

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+  LI G+   G L  A+ L  +M+K G  PDV T++  + G  K  N+ +   +F  
Sbjct: 378 VTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDE 437

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG---QLTDRGLEPDIITYNTIICG 602
           M   G+ PD   Y   +  ++ E  L    K FG   ++  RG  PD+ITYN  I G
Sbjct: 438 MLNRGLQPDRFAY---ITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDG 491


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 232/464 (50%), Gaps = 44/464 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V + L++ L   G++++A     +V Q    PN  TCN IL RL  N Q G    LFD+L
Sbjct: 136 VVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLL 195

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
               P PNV TF+ +I+  CKE +L +A  L+  M  M   PD++ Y+ LIDG  K G L
Sbjct: 196 ----PVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDL 251

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E  +L+      G   DVV ++++++ +   G + +A   +  M   G + NV+++S  
Sbjct: 252 EEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTF 311

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +   C++G + EA  LF Q+ +R + P+  TY+SL+DG CK+G+L D   L D M+ +GL
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 371

Query: 420 KPDAVVCSLLINGLMGD----------------------------------------ALR 439
            P+ V  +++++GL  +                                        AL 
Sbjct: 372 VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALD 431

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              Q     +  ++ ++ TL+ G C+ ++  +   L   M    ++P+ + +T ++  + 
Sbjct: 432 LLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALF 491

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G  S A+ L  ++L  G  P+V+TY A+I GL K  +IS  +  F  M   G+ P++ 
Sbjct: 492 KAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQ 551

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            Y  L++   K  +L+ A+ L  ++ D+G+  D + Y ++I GY
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGY 595



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 237/483 (49%), Gaps = 17/483 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLC 170
           ++ +I+   + G++ E+  +F  M  MG   SPD+V    + L+D       + +  +L 
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAMGC--SPDVVT--YNSLIDGYGKCGDLEEVEQLV 258

Query: 171 RAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             MR  G       Y  L+N   + G +E A+    ++ ++G V N+VT +  +   C  
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKE 318

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A  LF  + + G  PN  T+++L++  CK  +L+ A  L + M+   LVP+++ Y
Sbjct: 319 GLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 378

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++++DGL K G++ E + +L      G+K + +++++++  +    +  RA+   ++M N
Sbjct: 379 TVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKN 438

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G   +V  Y  LI GLC+  ++ EA  L  ++    L P+ + Y++++D   K+GK  +
Sbjct: 439 KGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESE 498

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
             +L   ++  G +P+ V    LI+GL     + +A+  F +   + L PN+  +  L+D
Sbjct: 499 AVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALID 558

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C++      + L   M    +  D + +T LI G   Q +L  A  L  +M++ GL  
Sbjct: 559 GFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQL 618

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D+  Y+  I G      +     +   M   G+ PD  +YN L+    K  N++ A  L 
Sbjct: 619 DLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQ 678

Query: 582 GQL 584
            ++
Sbjct: 679 NEM 681



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 203/440 (46%), Gaps = 34/440 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + + G+++++   F  M   G+  +       +        V +  KL   MR
Sbjct: 273 YNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMR 332

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G    EF    L++G  + G +++A  +  +++ +G VPN+VT   ++  LC  G++ 
Sbjct: 333 VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVA 392

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A ++  ++   G K N + ++TLI+        E+A  L N M    +  D+ +Y  LI
Sbjct: 393 EADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLI 452

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K  ++ E   LL      GL+ + V+++++MDA    G    AV    ++L+ GF 
Sbjct: 453 WGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQ 512

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV++Y  LI GLC+ G + EA   F ++    L+P++  Y++LIDGFCK G L     L
Sbjct: 513 PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHL 572

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            + MI +G+  D VV + LI+G M  A              NL                 
Sbjct: 573 MNEMIDKGMSLDKVVYTSLIDGYMKQA--------------NL----------------Q 602

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D   L   M    ++ D+  +T  I G  +   +  A  +  +M+  G+TPD   Y+ +I
Sbjct: 603 DAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662

Query: 531 HGLFKGKNISVGLHMFKLME 550
               K  N+     +   ME
Sbjct: 663 RKYQKLGNMEEASSLQNEME 682


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 169/589 (28%), Positives = 280/589 (47%), Gaps = 72/589 (12%)

Query: 85  HVFDKMVIQFGKTYNFFRLFRDSLGDF---GCD-----YSFLIENYVRIGKIDESVEIFA 136
           +V+  +V    +  +F R  R+ +G     GCD     Y+  I    +  ++ E+VEI  
Sbjct: 216 YVYTAVVRSLCELKDFIRA-REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKN 274

Query: 137 YMS------DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMN 186
            +S      D+G Y +  LV  L  C V+    G+  ++   M   GF   E     L++
Sbjct: 275 LLSYKGLRADVGTYCT--LVLGL--CKVEEFEAGE--EMMNEMIEFGFVPSEAAVSNLVD 328

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           GL +KG I +AF +  +V + G  P++   N ++  +C +G++  A SLF+ +   G  P
Sbjct: 329 GLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFP 388

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           N VT+S LI++FCK  KL+ A      M E+ +   +  YS LI G  K G+L+    L 
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              +  GLK +VV+++S++  Y   G++  A + Y  M   G  PN  +++ LI GLC  
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHA 508

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
            R+ EA  LFG+++   + P+ +TY+ LI+G CK G     F L D M+++GL PD    
Sbjct: 509 NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTY 568

Query: 427 SLLINGL-----MGDALRFF--FQSVRMTL------IPNLFIFNTLMDGCCRL------- 466
             LI+GL     + +A  F    Q  +  L      +PN+  +  L++G C++       
Sbjct: 569 RPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAE 628

Query: 467 -------------KRATDTVKLFMLMGMYNIK--------------PDVITHTVLIRGIA 499
                         + T    L  L    NI+               + +T+ +LIRG  
Sbjct: 629 LLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFC 688

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G +  A  +   M+  G++PD I+YS II+   +  ++   + +++ M   GV PD  
Sbjct: 689 KLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTV 748

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            YN L+        L  A +L   +  RG++P+  TYN++I G C ++S
Sbjct: 749 AYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSS 797



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 162/633 (25%), Positives = 272/633 (42%), Gaps = 123/633 (19%)

Query: 63  SSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS------ 116
           S+ +   LIH L+QS++   AS +   ++++       F  F DS     C++S      
Sbjct: 92  STTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRK--CNFSTTLGFD 149

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
            LI+ YV+  +  + + +   M D GI   P +                     R + G 
Sbjct: 150 LLIQTYVQNRRELDGLVVVRLMMDCGIL--PQI---------------------RTLSG- 185

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN------------------------ 212
                  ++NGL+R      A H+  +++  G  P+                        
Sbjct: 186 -------VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVI 238

Query: 213 -----------IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
                      + T N  ++ LC N ++  A  + ++L   G + +V T+ TL+   CK 
Sbjct: 239 GRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKV 298

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            + E   ++ N M+E   VP     S L+DGL K G +    +L+      G+   + V+
Sbjct: 299 EEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVY 358

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++++    G +  A   ++ M + G  PN ++YSILI   C++G+L  A    G++  
Sbjct: 359 NALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
             ++ ++  YSSLI G CK GKLR   SL+D MI  GLKP+ V+ + LI+G      + +
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A R + +     + PN + F  L+ G C   R  +  KLF  M  +N+ P+ +T+ VLI 
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF--------KL 548
           G   +G+   A  L  +M+++GL PD  TY  +I GL     +S              KL
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598

Query: 549 MERNGVAPDIAIYNVLLNMLIK-----------------------------------ECN 573
            E  G  P++  Y  L+N L K                                   E N
Sbjct: 599 NEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 658

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           ++ A++L   L + G   + +TYN +I G+C L
Sbjct: 659 IEKAIQLHDVLLE-GFLANTVTYNILIRGFCKL 690



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 196/414 (47%), Gaps = 18/414 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+++ + GK+D ++     M+++GI  +      L+S       +     L   M 
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      +Y  L++G  ++G + NAF ++ ++  +G  PN  T   ++  LC   ++ 
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ LF  ++     PN VT++ LI   CKE    +AF+L + M+E  LVPD   Y  LI
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLD--------VVVFSSVMDAYVGIGDVGRAVQTYD 342
            GL   GR+ E  E +        KL+        VV ++++++    IG + +A     
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCR 632

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            ML    LPN  +Y+  +  L  +G + +A  L   VL+     + +TY+ LI GFCK G
Sbjct: 633 EMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLG 691

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFN 457
           ++++   +  NMI  G+ PD +  S +I      G + +A++ +   +   + P+   +N
Sbjct: 692 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 751

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
            L+ GCC     T   +L   M    +KP+  T+  LI G     S+SS    F
Sbjct: 752 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 188/385 (48%), Gaps = 8/385 (2%)

Query: 231 NASSLFDVLLLVGPKPNVVT---FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           N   LF+  L    K N  T   F  LI  + +  +      +  LMM+  ++P +   S
Sbjct: 125 NPEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLS 184

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +++GL +  + +    L    +  GL+ DV V+++V+ +   + D  RA +   RM + 
Sbjct: 185 GVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESS 244

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G   +V +Y++ I+GLC+  R+ EA  +   +  + L   + TY +L+ G CK  +   G
Sbjct: 245 GCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAG 304

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             + + MI+ G  P     S L++GL     +G A     +  +  + P+LF++N L++ 
Sbjct: 305 EEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+  +  +   LF  MG   + P+ +T+++LI     +G L  A+    +M + G+   
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKAT 424

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V  YS++I G  K   +     +F  M  NG+ P++ IY  L++   KE  L  A +L+ 
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484

Query: 583 QLTDRGLEPDIITYNTIICGYCSLN 607
           ++T +G+ P+  T+  +I G C  N
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHAN 509



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 132/317 (41%), Gaps = 57/317 (17%)

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEAC--------------GLF-------------- 376
           L+  F  +  S+ ILI  L Q      A               GLF              
Sbjct: 85  LHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFST 144

Query: 377 -------------------GQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYD 412
                              G V++R +      P + T S +++G  +  + R    L+D
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 413 NMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLIP---NLFIFNTLMDGCCRLK 467
            ++  GL+PD  V + ++  L  + D +R      RM       ++  +N  + G C+ +
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  + V++  L+    ++ DV T+  L+ G+       +   +  +M++ G  P     S
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++ GL K  NI     +   +++ GVAP + +YN L+N + K+  LD A  LF  +  +
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384

Query: 588 GLEPDIITYNTIICGYC 604
           GL P+ +TY+ +I  +C
Sbjct: 385 GLFPNDVTYSILIDSFC 401



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 5/186 (2%)

Query: 169 LCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           LCR M           Y   ++ L  +G IE A  +H  V+  GF+ N VT N +++  C
Sbjct: 630 LCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFC 688

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+I  A+ +   ++  G  P+ +++ST+I  +C+   L++A +L+  M+   + PD +
Sbjct: 689 KLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTV 748

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ LI G    G L +  EL    + RG+K +   ++S++     +  V      +   
Sbjct: 749 AYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSCK 808

Query: 345 LNGGFL 350
           LN  FL
Sbjct: 809 LNWCFL 814


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 227/432 (52%), Gaps = 7/432 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L++   R G ++ A  +   +  +G  P IVT N +LK LC + +   A  +F  +
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA-GR 298
                 P+V +F+ LI  FC+  ++E+A + Y  M +  + PD++ +S LI GLF   G+
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI-GLFSTRGK 312

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +      L      GL  D V+++ V+  +   G +  A++  D M+  G LP+V++Y+ 
Sbjct: 313 MDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNT 372

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ GLC+Q RL++A  L  ++  R + P L T+++LI G+C+ G       L+D ++ + 
Sbjct: 373 LLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           L+PD V  + LI+G+     +  A   +       + PN   ++ L+D  C   +  +  
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF 492

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
                M      P+++T+  +I+G    G++        +M++  + PD+IT++ +IHG 
Sbjct: 493 GFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGY 552

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K +N+    ++F +ME+  V PD   YN+++N   ++ N++ A ++F ++   G+EPD 
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDR 612

Query: 594 ITYNTIICGYCS 605
            TY ++I G+ +
Sbjct: 613 YTYMSLINGHVT 624



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/546 (25%), Positives = 263/546 (48%), Gaps = 55/546 (10%)

Query: 65  PNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFR------------LFRDSLGDFG 112
           P++A+  + L+ S   +V ++  + MV  + K+  F +            +F D +    
Sbjct: 138 PHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV---- 193

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLC 170
             ++ LI+   R G +D ++ +   M++ G  L P +V    ++  L       +  ++ 
Sbjct: 194 -THNVLIDARFRAGDVDAAIALVDSMANKG--LKPGIVTFNSVLKGLCKHRRFDKAKEVF 250

Query: 171 RAMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           RAM           +  L+ G  R G +E A   ++++ QRG  P++V+ + ++      
Sbjct: 251 RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTR 310

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++ +A++    +  +G  P+ V ++ +I  FC+   + +A ++ + M+ +  +PD++ Y
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + L++GL K  RL +  ELL    +RG+  D+  F++++  Y   G+  +A+Q +D +L+
Sbjct: 371 NTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH 430

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               P+V++Y+ LI G+C++G L +A  L+  +  R + P+ +TYS LID  C+ G++ +
Sbjct: 431 QRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEE 490

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
            F   D M+ +G                               +PN+  +N+++ G CR 
Sbjct: 491 AFGFLDEMVSKG------------------------------NLPNIMTYNSIIKGYCRS 520

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                  +    M   NI PD+IT   LI G   + ++  A  +F  M K  + PD +TY
Sbjct: 521 GNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTY 580

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + II+G  +  N+     +FK M  +G+ PD   Y  L+N  +   N   A +L  ++  
Sbjct: 581 NMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMH 640

Query: 587 RGLEPD 592
           RG  PD
Sbjct: 641 RGFAPD 646



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 200/378 (52%), Gaps = 5/378 (1%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A   + ++L    + N  T + +++++CK  + +KA  + + M +  + PD++ +++LID
Sbjct: 141 AEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLID 200

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
             F+AG +     L+ +  ++GLK  +V F+SV+          +A + +  M      P
Sbjct: 201 ARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAP 260

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V S++ILI G C+ G + EA   + ++  R + P ++++S LI  F   GK+    +  
Sbjct: 261 DVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYL 320

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M   GL PD V+ +++I G      M +ALR   + V +  +P++  +NTL++G C+ 
Sbjct: 321 REMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQ 380

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  D  +L   M    + PD+ T T LI G    G+   A+ LF  +L + L PDV+ Y
Sbjct: 381 HRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAY 440

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           +++I G+ +  +++    ++  M    + P+   Y++L++   ++  ++ A     ++  
Sbjct: 441 NSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVS 500

Query: 587 RGLEPDIITYNTIICGYC 604
           +G  P+I+TYN+II GYC
Sbjct: 501 KGNLPNIMTYNSIIKGYC 518



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 169/345 (48%), Gaps = 11/345 (3%)

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            P   ++ +LI    ++ + +E  E     LD  + +     ++++ A    G    A +
Sbjct: 84  TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEE 143

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            Y  +L+     N  + +I++   C+     +A  +  ++  R + P ++T++ LID   
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARF 203

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSV-RMTLIPNLF 454
           ++G +    +L D+M  +GLKP  V  + ++ GL      D  +  F+++ + ++ P++ 
Sbjct: 204 RAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVR 263

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            FN L+ G CR+    + +K +  M    + PDV++ + LI   +++G +  A     +M
Sbjct: 264 SFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM 323

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
              GL PD + Y+ +I G  +  ++S  L +   M   G  PD+  YN LLN L K+  L
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRL 383

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
             A +L  ++ +RG+ PD+ T+ T+I GYC       DG F+  +
Sbjct: 384 LDAEELLNEMKERGVTPDLCTFTTLIHGYCR------DGNFEKAL 422


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 256/536 (47%), Gaps = 46/536 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLS----------------PDLVQRLMSCLV 158
           +  LI  Y +  K  E+ E F  + D  + +                 P L Q     ++
Sbjct: 90  FDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVL 149

Query: 159 DSNSVGQYYKL-------CRAMRGKGF----------CVY------EFLMNGLLRKGVIE 195
            S+S    Y L       C+ +   G           CV+        L++   R G ++
Sbjct: 150 SSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVD 209

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  +   +  RG  P IVT N +LK LC + +   A  +F  +      P+V +F+ LI
Sbjct: 210 AAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILI 269

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF-KAGRLKEGNELLLTALDRGL 314
             FC+  ++++A + Y  M    + PD++ +S LI GLF + G +      L      GL
Sbjct: 270 GGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI-GLFSRRGEMDHAGAYLREMKGLGL 328

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             D V+++ V+  +   G +  A++  D M+  G LP+V++Y+ L+ GLC+Q RL++A  
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEK 388

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           L  ++  R + P L T+++LI G+C+ G   +   L+D ++++ L+PD V  + LI+G+ 
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMC 448

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               +  A   +       ++PN   ++ L+D  C   +  D       M      P++ 
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR 508

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+  +I+G    G++        +M +  + PD+IT++ +IHG  K +N+    ++F +M
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIM 568

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           E+  V PD   YN+++N   ++ N+  A ++F  + D G+EPD  TY ++I G+ +
Sbjct: 569 EKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVT 624



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 249/540 (46%), Gaps = 43/540 (7%)

Query: 65  PNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNF-------FRLFRDSLGDFGCDYSF 117
           P++AQ  + L+ S   +V ++  + MV  + KT  F         + +  +      ++ 
Sbjct: 138 PHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNV 197

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI+   R G +D ++ +   M++ G  L P                             G
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRG--LKP-----------------------------G 226

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y  ++ GL +    + A  + R + Q    P++ + N ++   C  G++  A   + 
Sbjct: 227 IVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYK 286

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +      P+VV+FS LI  F +  +++ A      M  + LVPD +IY+++I G  +AG
Sbjct: 287 EMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAG 346

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            + E   +    +  G   DVV ++++++       +  A +  + M   G  P++ +++
Sbjct: 347 SMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFT 406

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G C+QG    A  LF  +L +RL P ++TY+SLIDG C+ G L     L+D+M  R
Sbjct: 407 TLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAR 466

Query: 418 GLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            + P+ +  S+LI+     G + DA  F  + V+   +PN+  +N+++ G CR       
Sbjct: 467 EILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKG 526

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            +    M   N+ PD+IT   LI G   + ++  A  +F  M K  + PD +TY+ II+G
Sbjct: 527 QQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIING 586

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
             +  N+     +FK M  +G+ PD   Y  L+N  +   N   A +L  ++  RG  PD
Sbjct: 587 FSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 218/430 (50%), Gaps = 5/430 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ L+    +      AF   R ++           N +L  L   G    A   + ++
Sbjct: 89  VFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLV 148

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L    + N  T + +++++CK  + + A  + + M +  + PD++ +++LID  F+AG +
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDV 208

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L+ +  +RGLK  +V ++SV+          +A + +  M      P+V S++IL
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNIL 268

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+ G + EA   + ++  R + P ++++S LI  F + G++    +    M   GL
Sbjct: 269 IGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGL 328

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V+ +++I G      M +ALR   + V    +P++  +NTL++G C+  R  D  K
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEK 388

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M    + PD+ T T LI G   QG+  +A+ LF  +L++ L PDV+TY+++I G+ 
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMC 448

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +  +++    ++  M    + P+   Y++L++   ++  ++ A     ++  +G  P+I 
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR 508

Query: 595 TYNTIICGYC 604
           TYN+II GYC
Sbjct: 509 TYNSIIKGYC 518



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 161/330 (48%), Gaps = 5/330 (1%)

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            P   ++ +LI    ++ + +E  E     LD  + +     ++++      G    A +
Sbjct: 84  TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQE 143

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            Y  +L+     N  + +I++   C+      A  +  ++  R + P ++T++ LID   
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARF 203

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSV-RMTLIPNLF 454
           ++G +    +L D+M  RGLKP  V  + ++ GL      D  +  F+++ + ++ P++ 
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVR 263

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            FN L+ G CR+    + VK +  M    + PDV++ + LI   + +G +  A     +M
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM 323

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
              GL PD + Y+ +I G  +  ++S  L +   M   G  PD+  YN LLN L K+  L
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRL 383

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             A KL  ++ +RG+ PD+ T+ T+I GYC
Sbjct: 384 LDAEKLLNEMEERGVTPDLCTFTTLIHGYC 413



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 103/263 (39%), Gaps = 40/263 (15%)

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
           P    +  LI  + +S K R+ F  +  ++   +   A   + L+  L         Q  
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144

Query: 446 -RMTLIP----NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
            R+ L      N +  N ++   C+         +   M    + PDV+TH VLI     
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G + +AI L   M  RGL P ++TY++++ GL K +       +F+ M++  VAPD+  
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDR--------------------------------- 587
           +N+L+    +   +  A+K + ++  R                                 
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324

Query: 588 --GLEPDIITYNTIICGYCSLNS 608
             GL PD + Y  +I G+C   S
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGS 347


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 221/429 (51%), Gaps = 9/429 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + LI  +  +G++  S  +   +  +G   +   +  LM  L     V +       +  
Sbjct: 49  NILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVA 108

Query: 176 KGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF +    Y  L+NGL + G   +A  + R +  R   PN+V  N I+  LC +  +  
Sbjct: 109 QGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE 168

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L+  +   G  PNV+T+STLI  FC   +L +AF L N M+  ++ P++  Y+IL+D
Sbjct: 169 AYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMD 228

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G++KE   LL      G+K +VV ++++MD Y  IG+V  A Q +  M+  G  P
Sbjct: 229 ALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNP 288

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV SY+I+I  LC+  R+ EA  L  +VL + + P+ +TYSSLIDGFCK G++     L 
Sbjct: 289 NVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLL 348

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M  RG   D V  + L++ L     +  A   F +     + PN + +  L+DG C+ 
Sbjct: 349 KEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKG 408

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  +  KLF  + +   + +V T+ V+I G+  +G L  A+ +  +M + G  PD +T+
Sbjct: 409 GRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTF 468

Query: 527 SAIIHGLFK 535
             II  LF+
Sbjct: 469 EIIIRSLFE 477



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 227/414 (54%), Gaps = 5/414 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  + +Q+  +G  P++ T N ++   C  GQ+  + ++   +L +G +PN +T +TL+ 
Sbjct: 29  AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMK 88

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C + +++K+   ++ ++      D + Y+ L++GL K G  +   +LL    DR  + 
Sbjct: 89  GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP 148

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV++++++D       V  A   Y  M   G  PNVI+YS LI G C  G+L+EA GL 
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LM 434
            +++++ + P++ TY+ L+D  CK GK+++  +L   M K G+KP+ V  + L++G  L+
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLI 268

Query: 435 GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           G+   A + F   V+  + PN++ +N ++D  C+ KR  + + L   +   N+ P+ +T+
Sbjct: 269 GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           + LI G    G ++SA+ L  +M  RG   DV+TY++++  L K +N+     +F  M+ 
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            G+ P+   Y  L++ L K      A KLF  L  +G   ++ TYN +I G C 
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCK 442



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 233/422 (55%), Gaps = 5/422 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N     G +  +F +  ++++ G+ PN +T N ++K LC+ G++  +    D ++  G
Sbjct: 51  LINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQG 110

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + + V+++TL+N  CK  +   A +L  ++ +    P++++Y+ +IDGL K   + E  
Sbjct: 111 FQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAY 170

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L      RG+  +V+ +S+++  +   G +  A    + M+     PNV +Y+IL+  L
Sbjct: 171 DLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDAL 230

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G++ EA  L   +    ++P++++Y++L+DG+C  G++++   ++  M+++G+ P+ 
Sbjct: 231 CKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNV 290

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              +++I+ L     + +A+    + +   ++PN   +++L+DG C+L R T  + L   
Sbjct: 291 YSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKE 350

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M       DV+T+T L+  +    +L  A  LF +M +RG+ P+  TY+A+I GL KG  
Sbjct: 351 MYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGR 410

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
                 +F+ +   G   ++  YNV+++ L KE  LD AL +  ++ + G  PD +T+  
Sbjct: 411 HKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEI 470

Query: 599 II 600
           II
Sbjct: 471 II 472



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 210/401 (52%), Gaps = 5/401 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P I+  NKI+  L        A SLF  + + G +P++ T + LIN FC   ++  +F 
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +   ++++   P+ I  + L+ GL   G +K+        + +G ++D V ++++++   
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            IG+   A++    + +    PNV+ Y+ +I GLC+   + EA  L+ ++  R + P+++
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           TYS+LI GFC +G+L + F L + MI + + P+    ++L++ L     + +A       
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            +  + PN+  +NTLMDG C +    +  ++F  M    + P+V ++ ++I  +     +
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ L  ++L + + P+ +TYS++I G  K   I+  L + K M   G   D+  Y  L
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSL 366

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L+ L K  NLD A  LF ++ +RG++P+  TY  +I G C 
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCK 407



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 177/368 (48%), Gaps = 30/368 (8%)

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +LLV   P ++ F+ ++ +  K      A  L+  M    + PDL   +ILI+     G+
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +     +L   L  G + + +  +++M      G+V +++  +D+++  GF  + +SY+ 
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ GLC+ G    A  L   +  R   P+++ Y+++IDG CK   + + + LY  M  RG
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 419 LKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +                               PN+  ++TL+ G C   +  +   L   
Sbjct: 181 I------------------------------FPNVITYSTLIYGFCLAGQLMEAFGLLNE 210

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M + NI P+V T+T+L+  +  +G +  A  L   M K G+ P+V++Y+ ++ G      
Sbjct: 211 MILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGE 270

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     MF  M + GV P++  YN++++ L K   +D A+ L  ++  + + P+ +TY++
Sbjct: 271 VQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSS 330

Query: 599 IICGYCSL 606
           +I G+C L
Sbjct: 331 LIDGFCKL 338



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 147/326 (45%), Gaps = 45/326 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPDLVQR--LMSCLVDSNSVGQYYKLCR 171
           YS LI  +   G++   +E F  +++M +  ++P++     LM  L     V +   L  
Sbjct: 188 YSTLIYGFCLAGQL---MEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLA 244

Query: 172 AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M  +G       Y  LM+G    G ++NA  M   ++Q+G  PN+ + N ++ RLC + 
Sbjct: 245 VMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSK 304

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A +L   +L     PN VT+S+LI+ FCK  ++  A  L   M       D++ Y+
Sbjct: 305 RVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYT 364

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+D L K   L +   L +   +RG++                                
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQ-------------------------------- 392

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              PN  +Y+ LI GLC+ GR   A  LF  +L++    ++ TY+ +I G CK G L + 
Sbjct: 393 ---PNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEA 449

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL 433
            ++   M + G  PDAV   ++I  L
Sbjct: 450 LAMKSKMEENGCIPDAVTFEIIIRSL 475



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 4/170 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+ + ++G+I  ++++   M   G          L+  L  + ++ +   L   M+
Sbjct: 328 YSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L++GL + G  +NA  + + ++ +G   N+ T N ++  LC  G + 
Sbjct: 388 ERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLD 447

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
            A ++   +   G  P+ VTF  +I +  ++ + +KA +L + M+  DL+
Sbjct: 448 EALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 158/539 (29%), Positives = 259/539 (48%), Gaps = 52/539 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR----LMSCLVDSNSVGQYYKLC 170
           Y+  I    +  ++ E+VE+   + + G  L  DLV      L  C +    VG   ++ 
Sbjct: 263 YNVFINGLCKSKRVWEAVEVKRSLGEKG--LKADLVTYCTLVLGLCRIQEFEVGM--EMM 318

Query: 171 RAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M   G+   E     L+ GL++ G IE AF +  +V + G VPN+   N ++  LC  
Sbjct: 319 DEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKT 378

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++  A  LF V+   G  PN VT++ LI+ F + AKL+ AF  +N M+E  +   +  Y
Sbjct: 379 GKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSY 438

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + +I+   K G++K    L    +D+GLK  V  ++S++  Y   G V +A + Y  M  
Sbjct: 439 NSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTG 498

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PN ++++ LI GLCQ  ++ EA  LF +++  ++ P+ +TY+ LI+G C+ G    
Sbjct: 499 KGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTR 558

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            F L D MIK+GL PD      LI GL     + +A  F           +   +  L+ 
Sbjct: 559 AFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQ 618

Query: 462 GCC---RLKRA-----------------------------TDTVKLFMLMGMY--NIKPD 487
           G C   R+K A                              D +   +L  M+   ++PD
Sbjct: 619 GFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPD 678

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            + +T+LI G    G+L  A   ++ M+  G  P+ +TY+A+++GLFK   ++    +FK
Sbjct: 679 NVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFK 738

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            M      P+   Y   L+ L KE N++ AL+L   +  +G   + +TYN +I GYC +
Sbjct: 739 RMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML-QGSFANTVTYNILIRGYCQI 796



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 246/498 (49%), Gaps = 17/498 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ + R  K+D +   F  M + GI  +      +++C      +     L + M 
Sbjct: 403 YTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMV 462

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++G  + G++  AF ++ ++  +G  PN VT   ++  LC   ++ 
Sbjct: 463 DKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMA 522

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS LFD ++ +   PN VT++ LI   C+E    +AF+L + M++  L PD   Y  LI
Sbjct: 523 EASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLI 582

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL   GR+ E  E +     +  +LD + +++++  +   G +  A+     M+  G  
Sbjct: 583 AGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQ 642

Query: 351 PNVISYSILIKG-LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            +++SY++LI G L Q  R++    L  ++  + ++P  + Y+ LIDGF KSG L+  F 
Sbjct: 643 MDLVSYAVLISGALNQNDRILFE--LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFE 700

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
            +  MI  G  P++V  + L+NGL     + +A   F + +    IPN   +   +D   
Sbjct: 701 FWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLT 760

Query: 465 RLKRATDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           +     + ++L   ML G +    + +T+ +LIRG    G    A  L   M+  G+ PD
Sbjct: 761 KEGNMENALQLHNAMLQGSF---ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPD 817

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            ITYS  I+   K  N+   + M++ M + G+ PD  ++N L++       LD AL+L  
Sbjct: 818 CITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRN 877

Query: 583 QLTDRGLEPDIITYNTII 600
            +  RGL+P   TY++++
Sbjct: 878 DMMLRGLKPTQSTYHSLM 895



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/531 (24%), Positives = 250/531 (47%), Gaps = 42/531 (7%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S LIE  +++G I+ + E+   +  +G+  +  +   +++ L  +  + +   L   M  
Sbjct: 334 SGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAE 393

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +G       Y  L++G  R+  ++ AF+   ++I+ G    + + N ++   C  G++  
Sbjct: 394 RGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKM 453

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  LF  ++  G KP V T+++LI+ +CK+  + KAF+LY+ M    + P+ + ++ LI 
Sbjct: 454 AELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALIC 513

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL +  ++ E ++L    ++  +  + V ++ +++ +   G+  RA +  D M+  G  P
Sbjct: 514 GLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSP 573

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  +Y  LI GLC  GR+ EA      +  +      L Y++L+ GFCK G++++     
Sbjct: 574 DTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVAR 633

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT----LIPNLFIFNTLMDGCCRLK 467
             M+ RGL+ D V  ++LI+G +    R  F+ +R      + P+  I+  L+DG  +  
Sbjct: 634 QEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSG 693

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
                 + + +M      P+ +T+T L+ G+   G ++ A LLF +ML     P+ ITY 
Sbjct: 694 NLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYG 753

Query: 528 AIIHGLFKGKNISVGLHMFKLMERN----------------------------------G 553
             +  L K  N+   L +   M +                                   G
Sbjct: 754 CFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIG 813

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + PD   Y+  +    K  N+DAA+ ++  +  RGL+PD + +N +I   C
Sbjct: 814 MVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACC 864



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 261/558 (46%), Gaps = 13/558 (2%)

Query: 63  SSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDF----GCDYSFL 118
           S+ +   LIH LLQ+++   AS +   ++++    +  F  F +S   +       +  L
Sbjct: 102 STASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDML 161

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
           I++YV+  ++ + V +   M D G+      +  L++ L       Q  +L   +   G 
Sbjct: 162 IQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGV 221

Query: 179 ---C-VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
              C +Y  ++  L        A  +  Q    G   +IVT N  +  LC + ++  A  
Sbjct: 222 KPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVE 281

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   L   G K ++VT+ TL+   C+  + E   ++ + M+E+  VP     S LI+GL 
Sbjct: 282 VKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLI 341

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G ++   ELL      G+  ++ V++S++++    G +  A   +  M   G  PN +
Sbjct: 342 KMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDV 401

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ILI G  ++ +L  A   F +++   +  ++ +Y+S+I+  CK GK++    L+  M
Sbjct: 402 TYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEM 461

Query: 415 IKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + +GLKP     + LI     +GL+  A + + +     + PN   F  L+ G C++ + 
Sbjct: 462 VDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKM 521

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  KLF  M    I P+ +T+ VLI G   +G+ + A  L  +M+K+GL+PD  TY  +
Sbjct: 522 AEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPL 581

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I GL     +S        +       D   Y  LL    KE  +  AL    ++  RGL
Sbjct: 582 IAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGL 641

Query: 590 EPDIITYNTIICGYCSLN 607
           + D+++Y  +I G  + N
Sbjct: 642 QMDLVSYAVLISGALNQN 659



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 183/380 (48%), Gaps = 39/380 (10%)

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           F  LI  + +  ++     + NLM +  L+P++   S L                 L AL
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSAL-----------------LNAL 200

Query: 311 DR-----------------GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            R                 G+K D  +++ V+     + D  +A +  ++    G   ++
Sbjct: 201 ARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSI 260

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y++ I GLC+  R+ EA  +   +  + L+  L+TY +L+ G C+  +   G  + D 
Sbjct: 261 VTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDE 320

Query: 414 MIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           MI+ G  P     S LI GL  MG    A     +  ++ ++PNLF++N++++  C+  +
Sbjct: 321 MIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGK 380

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   LF +M    + P+ +T+T+LI G   +  L  A   F +M++ G++  V +Y++
Sbjct: 381 LEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNS 440

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+   K   + +   +FK M   G+ P +A Y  L++   K+  +  A KL+ ++T +G
Sbjct: 441 MINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKG 500

Query: 589 LEPDIITYNTIICGYCSLNS 608
           + P+ +T+  +ICG C +N 
Sbjct: 501 IAPNTVTFTALICGLCQINK 520



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 189/406 (46%), Gaps = 56/406 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LIE + R G    + E+   M   G  LSPD    + L++ L  +  V +  +    
Sbjct: 543 YNVLIEGHCREGNTTRAFELLDEMIKKG--LSPDTYTYRPLIAGLCSTGRVSEAKEFIND 600

Query: 173 MRGKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           +  K       C Y  L+ G  ++G I+ A    ++++ RG   ++V+       + I+G
Sbjct: 601 LHHKHQRLDELC-YTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVS-----YAVLISG 654

Query: 228 QIG-NASSLFDVLLLV---GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
            +  N   LF++L  +   G +P+ V ++ LI+ F K   L+KAF+ + +M+    VP+ 
Sbjct: 655 ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNS 714

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + Y+ L++GLFKAG + E   L    L      + + +   +D     G++  A+Q ++ 
Sbjct: 715 VTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNA 774

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           ML G F  N ++Y+ILI+G CQ G+  EA  L   ++   + P  +TYS+ I  +CK G 
Sbjct: 775 MLQGSF-ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGN 833

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +     +++ M++RGLKPD VV                              FN L+  C
Sbjct: 834 VDAAMDMWECMLQRGLKPDRVV------------------------------FNFLIHAC 863

Query: 464 C---RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
           C    L RA       ML G+   KP   T+  L+  +A +  L+ 
Sbjct: 864 CLNGELDRALQLRNDMMLRGL---KPTQSTYHSLMVQLAQRARLTQ 906



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 129/316 (40%), Gaps = 57/316 (18%)

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL-----------TYSS 393
           L+  F  +  S+ ILI  L Q      A  L   +L+R L P  +            +SS
Sbjct: 95  LHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSS 154

Query: 394 ------LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
                 LI  + ++ ++ DG  + + M   GL P+    S L+N L         L  F 
Sbjct: 155 SSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFD 214

Query: 443 QSVRMTLIPNLFI-----------------------------------FNTLMDGCCRLK 467
             V   + P+ +I                                   +N  ++G C+ K
Sbjct: 215 TLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSK 274

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  + V++   +G   +K D++T+  L+ G+         + +  +M++ G  P     S
Sbjct: 275 RVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVS 334

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I GL K  +I     +   + + GV P++ +YN ++N L K   L+ A  LF  + +R
Sbjct: 335 GLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAER 394

Query: 588 GLEPDIITYNTIICGY 603
           GL P+ +TY  +I G+
Sbjct: 395 GLNPNDVTYTILIDGF 410


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 258/507 (50%), Gaps = 34/507 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   +  K+ E++ +   M+  G+  +      +++ L     + +  +L   MR
Sbjct: 245 YNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMR 304

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           GKG       Y  L+NG  ++G +     +  +++ +G  PN+VT   ++  +C  G + 
Sbjct: 305 GKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLS 364

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +FD + + G +PN  T++TLI+ FC++  + +A+++ + M+     P ++ Y+ L+
Sbjct: 365 RAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALV 424

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G    GR++E   +L   ++RGL  DVV +S+V+  +    ++G+A Q  + M+  G L
Sbjct: 425 HGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVL 484

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++YS LI+GLC Q +LVEA  LF +++ R L P  +TY+SLI+ +C  G+L     L
Sbjct: 485 PDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRL 544

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDA---------LRFFFQSVRMTLIPNLFIFNTLMD 461
           +D M++RG  PD V  S+LINGL   A         L+ F++      +P+   +NTL++
Sbjct: 545 HDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEES----VPDDVTYNTLIE 600

Query: 462 GCC--RLKRATDTVKLFMLMGM-------------YNIKPDVITHTVLIRGIASQGSLSS 506
            C     K     VK F + G+              N KP+   + ++I G +  G++  
Sbjct: 601 NCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHK 660

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           A  L+ ++         +   A++  L + G N  +   + + + R+    D  +  VL+
Sbjct: 661 AYNLYMELEHSSFACHTVAVIALVKALAREGMNDELS-RLLQNILRSCRLNDAKVAKVLV 719

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPD 592
            +  KE N+DA L +  ++   GL PD
Sbjct: 720 EVNFKEGNMDAVLNVLTEMAKDGLLPD 746



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 230/448 (51%), Gaps = 28/448 (6%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++ G++ +G +E      R++ + G  PN+VT N ++   C   ++  A +L   +
Sbjct: 209 TYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAM 268

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            + G   N+++++++IN  C + ++ +  +L   M    LVPD + Y+ L++G  K G L
Sbjct: 269 AVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNL 328

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +G  LL   + +GL  +VV ++++++     G++ RAV+ +D+M   G  PN  +Y+ L
Sbjct: 329 HQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTL 388

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G CQ+G + EA  +  ++++    PS++TY++L+ G+C  G++++   +   M++RGL
Sbjct: 389 IDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGL 448

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V  S +I G      +G A +   + V   ++P+   +++L+ G C  ++  +   
Sbjct: 449 PPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFD 508

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    + PD +T+T LI      G LS A+ L  +M++RG  PD +TYS +I+GL 
Sbjct: 509 LFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLN 568

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN-------------------LD 575
           K     V   +   +      PD   YN     LI+ C+                   ++
Sbjct: 569 KKARTKVAKRLLLKLFYEESVPDDVTYNT----LIENCSNNEFKSVEGLVKGFCMKGLMN 624

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGY 603
            A ++F  +  R  +P+   YN +I G+
Sbjct: 625 EADRVFKTMLQRNHKPNAAIYNLMIHGH 652



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 230/438 (52%), Gaps = 11/438 (2%)

Query: 181 YEFLMNGLLRKGV-----IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           Y  +++ LLR+        ++A  + R +++ G  PN+ T N I++ +   G +      
Sbjct: 170 YNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGF 229

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
              +   G  PNVVT++TLI+A CK+ K+++A  L   M    +  +LI Y+ +I+GL  
Sbjct: 230 MRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCG 289

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            GR+ E  EL+     +GL  D V ++++++ +   G++ + +     M+  G  PNV++
Sbjct: 290 KGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVT 349

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI  +C+ G L  A  +F Q+ +R L P+  TY++LIDGFC+ G + + + +   MI
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G  P  V  + L++G      + +A+      V   L P++  ++T++ G CR +   
Sbjct: 410 VSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELG 469

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              ++   M    + PD +T++ LI+G+  Q  L  A  LF +M++RGL PD +TY+++I
Sbjct: 470 KAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLI 529

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +       +S  L +   M + G  PD   Y+VL+N L K+     A +L  +L      
Sbjct: 530 NAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV 589

Query: 591 PDIITYNTIICGYCSLNS 608
           PD +TYNT+I   CS N 
Sbjct: 590 PDDVTYNTLIEN-CSNNE 606



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 201/396 (50%), Gaps = 10/396 (2%)

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK-----LEKAFQLYNL 273
           ++K L   G +  A +L  +    G  P V++++ +++A  + +       + A +++  
Sbjct: 138 VVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRD 197

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M+   + P++  Y+++I G+   G L++G   +      G+  +VV +++++DA      
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           V  A+     M  GG   N+ISY+ +I GLC +GR+ E   L  ++  + L P  +TY++
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMT 448
           L++GFCK G L  G  L   M+ +GL P+ V  + LIN     G +  A+  F Q     
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           L PN   + TL+DG C+     +  K+   M +    P V+T+  L+ G    G +  A+
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAV 437

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +   M++RGL PDV++YS +I G  + + +     M + M   GV PD   Y+ L+  L
Sbjct: 438 GILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGL 497

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             +  L  A  LF ++  RGL PD +TY ++I  YC
Sbjct: 498 CLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYC 533



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 161/327 (49%), Gaps = 35/327 (10%)

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG-----DVGRAVQ 339
           ++ +++  L + G + +   LL  A   G    V+ +++V+DA +        D   A +
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            +  M+  G  PNV +Y+++I+G+  QG L +  G   ++    + P+++TY++LID  C
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           K  K+++  +L   M   G+                                NL  +N++
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAA------------------------------NLISYNSV 283

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           ++G C   R ++  +L   M    + PD +T+  L+ G   +G+L   ++L  +M+ +GL
Sbjct: 284 INGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGL 343

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
           +P+V+TY+ +I+ + K  N+S  + +F  M   G+ P+   Y  L++   ++  ++ A K
Sbjct: 344 SPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYK 403

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSL 606
           +  ++   G  P ++TYN ++ GYC L
Sbjct: 404 VLSEMIVSGFSPSVVTYNALVHGYCFL 430


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/542 (26%), Positives = 257/542 (47%), Gaps = 44/542 (8%)

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
            G  G  Y  L+  YV+  K+ E  E F  +   G+ +S +   +L+  LV +  V   +
Sbjct: 183 FGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAW 242

Query: 168 K-----------------------LCRA------------MRGKG----FCVYEFLMNGL 188
           +                       LC+             M GKG       Y  L+N  
Sbjct: 243 EIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAY 302

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
            R+G++E AF +      RG  P ++T N IL  LC  G+   A  +   +L +G  PN 
Sbjct: 303 CREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNA 362

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
            T++TL+   C+   + +A ++++ M    ++PDL+ +S LI  L + G L +       
Sbjct: 363 ATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFRE 422

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
               G+  D V+++ ++D +   G +  A++  D ML  G   +V++Y+  + GLC++  
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
             +A  LF +++ R + P   T+++LI G+CK G +    +L++ M++  LKPD V  + 
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LI+G      MG A   +   +R  +IP+   + T+++G C      + + L   M    
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           I+P+++T   LI+G    G +  A     +M+  G+ PD  +Y+ +I G  K  N+    
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +   ME+ G+  +I  YN++LN    E  +  A ++  ++ + G+ PD  TY+++I G+
Sbjct: 663 ILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGH 722

Query: 604 CS 605
            S
Sbjct: 723 VS 724



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 206/401 (51%), Gaps = 25/401 (6%)

Query: 64  SPNIAQLIHVLLQSDMRD---VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE 120
           +PN A    +L++   RD    A  +FD+M              R  L D    +S LI 
Sbjct: 359 TPNAATYNTLLVEICRRDNILEAQEIFDEMS------------RRGVLPDL-VSFSSLIG 405

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG--- 177
              R G + +++  F  M   GI     +   L+     + ++    K+   M  +G   
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465

Query: 178 -FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
               Y   +NGL +K +  +A  +  ++++RG VP+  T   +++  C +G +  A +LF
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + ++    KP+ VT++TLI+ FCK  ++ +A +L++ M+  D++PD I Y  +++G   +
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G L E   L    L++G++ ++V  ++++  Y   GD+ +A +   +M++ G +P+  SY
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI G  ++  L +A  L  ++  R L+ +++TY+ +++GFC  GK+++   +   MI+
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
            G+ PD    S LING      M +A RF  + ++  L+P+
Sbjct: 706 IGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
           F+F SV +       I++ L+    + K+  +  + F ++    +   +     L+ G+ 
Sbjct: 181 FYFGSVGL-------IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLV 233

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G +  A  ++ ++++ G+  +V T + +++ L K +     +     ME  GV  DI 
Sbjct: 234 RTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIV 293

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            YN L+N   +E  ++ A +L    + RG+EP ++TYN I+ G C +
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 96/247 (38%), Gaps = 48/247 (19%)

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           L+  C  FG V         L Y  L+  + ++ KLR+G   +  + ++G+      C+ 
Sbjct: 176 LISTCFYFGSVG--------LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNK 227

Query: 429 LINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           L+ GL+       A   + + VR  +  N++  N +++  C+  R  + V  F+      
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCK-DRKFENVMFFL------ 280

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
                                         M  +G+  D++TY+ +I+   +   +    
Sbjct: 281 ----------------------------SDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +       G+ P +  YN +L  L K    D A  +  ++   GL P+  TYNT++   
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372

Query: 604 CSLNSCL 610
           C  ++ L
Sbjct: 373 CRRDNIL 379


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 258/509 (50%), Gaps = 11/509 (2%)

Query: 96   KTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS 155
            +T  +  L   SLG+    Y+ L+  ++  G +DE+V++   M       +      L+ 
Sbjct: 514  RTVEYPSLGFKSLGEI--TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVD 571

Query: 156  CLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
             L  +  + +   L R M  +G       Y  LM    ++   E +  +  +++++G V 
Sbjct: 572  GLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVA 631

Query: 212  NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
            ++ T + ++  LC +  +  A  +F  +   G +P +  + TL+++  K+ K++ A Q++
Sbjct: 632  DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIF 691

Query: 272  NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
            N + E  LVPD  +Y+I+++GL K+ R+ E  +L+ +  ++ +  D+  ++S++D     
Sbjct: 692  NELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKS 751

Query: 332  GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
            G +  A   + +M   G  P+V++Y+ L+  L + G+L  A  +F  +  +R  P ++TY
Sbjct: 752  GRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTY 811

Query: 392  SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVR 446
            SSLID   K G++ + +  ++N I +G  P+  V S LI+     G++  AL  F +  R
Sbjct: 812  SSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871

Query: 447  MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
                PN+  +N L+ G  +  R     KL   M      PD++T+ +LI G+   G +  
Sbjct: 872  RQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDE 931

Query: 507  AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
            A   F +M ++G+ PDVIT++++I  L K   +     +F  ME  G  P +  YNVL++
Sbjct: 932  AESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991

Query: 567  MLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            +L +   +  A  +F ++  +G  PD IT
Sbjct: 992  ILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/584 (24%), Positives = 282/584 (48%), Gaps = 52/584 (8%)

Query: 68  AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRL--FRDSLGDFGCD-----YSFLIE 120
           A+ I  +++S + D   H F  ++    K+ N      F + + +  C      Y+ L+ 
Sbjct: 307 AEPIQEMIKSGI-DPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVN 365

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
              + G+++E+ E+F  M +     SPD +    L+  L  +        L + M+ +G 
Sbjct: 366 GLAKAGRLEEACEVFVEMKENNC--SPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGL 423

Query: 179 C----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  +++ L + G    A+ +   + ++G VP++ T N ++  L   GQ+    +
Sbjct: 424 VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLA 483

Query: 235 LFDVLLLVGPK------------------------PNV-------VTFSTLINAFCKEAK 263
           +   ++  G +                        P++       +T++TL++AF     
Sbjct: 484 IIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGH 543

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +++A +L  +M + + +P ++ Y+ L+DGL KAGRL E   LL     +G +  VV +SS
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS 603

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           +M ++        ++  +D M+  G + +V +YS++I  LC+   + +A  +FG++    
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEG 663

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDAL 438
           +EP L  Y +L+    K  K+     +++ + +  L PD  V ++++NGL+      +A 
Sbjct: 664 MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEAC 723

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           +         ++P+LF + +L+DG  +  R  +   +F  M     +PDV+ +T L+  +
Sbjct: 724 KLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVL 783

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G LS A+++F  M K+   PDV+TYS++I  L K   +    + F+     G  P++
Sbjct: 784 GKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNV 843

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            +Y+ L++   K+  +D AL+LF ++  R   P+I+TYN ++ G
Sbjct: 844 GVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSG 887



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 229/458 (50%), Gaps = 11/458 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQR 207
           LMS  + +  V +  KL   M+ K  C+     Y  L++GL + G ++ A  + R++ ++
Sbjct: 534 LMSAFIHNGHVDEAVKLLEVMK-KHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQ 592

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P++VT + ++       Q   + SLFD ++  G   +V T+S +IN  CK   +++A
Sbjct: 593 GCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQA 652

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             ++  M E  + P L  Y  L+  L K  ++    ++     +  L  D  V++ +++ 
Sbjct: 653 LDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNG 712

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
            V    V  A +  D M N   LP++ +Y+ L+ GL + GRL EA  +F ++     EP 
Sbjct: 713 LVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPD 772

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
           ++ Y+SL+D   K GKL     ++  M K+   PD V  S LI+     G + +A  FF 
Sbjct: 773 VVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFE 832

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
            S+     PN+ ++++L+D   +       ++LF  M      P+++T+  L+ G+A  G
Sbjct: 833 NSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAG 892

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L+ A  L  +M K G  PD++TY+ +I G+ K   +      FK M+  G+ PD+  + 
Sbjct: 893 RLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFT 952

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            L+  L K   L  A +LF  + + G  P ++TYN +I
Sbjct: 953 SLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLI 990



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 249/534 (46%), Gaps = 42/534 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+      + D  V+I   M   G  +S  L+  L+     +N+V    ++   M+
Sbjct: 185 YTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMK 244

Query: 175 GKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             G C     +Y F++  L++ G   +A  +  ++ Q    P+  T    +     +G++
Sbjct: 245 SFG-CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A+     ++  G  P V TF+ LI+A  K   +++A + +N M  +   P+++ Y+ L
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTL 363

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++GL KAGRL+E  E+ +   +     D + +++++D     G+   A   +  M + G 
Sbjct: 364 VNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGL 423

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           +PN+ +Y+I+I  L + GR  EA  LF  +  +   P + TY++LID   K G++    +
Sbjct: 424 VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLA 483

Query: 410 LYDNMIKRG------------------------------------LKPDAVVCSLLINGL 433
           +   M+++G                                    +  + ++ + + NG 
Sbjct: 484 IIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGH 543

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + +A++      +   IP +  + TL+DG  +  R  + V L   M     +P V+T++ 
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS 603

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L+     +     ++ LF +M+++G   DV TYS +I+ L K  ++   L +F  M+  G
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEG 663

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           + P +  Y  LL+ L+K+  +D AL++F +L +  L PD   YN ++ G    N
Sbjct: 664 MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSN 717



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 212/468 (45%), Gaps = 63/468 (13%)

Query: 4    KFKNLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKW--THNC 61
            +    +++ R + K  C  S    S L        +A+  K +    ++  F       C
Sbjct: 578  RLDEAVSLLREMEKQGCEPSVVTYSSL--------MASFYKRDQEEESLSLFDEMVRKGC 629

Query: 62   VSSPNIAQL-IHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE 120
            V+  +   L I+ L +SD  D A  VF +M               + +     +Y  L+ 
Sbjct: 630  VADVSTYSLVINCLCKSDDVDQALDVFGRMK-------------EEGMEPLLGNYKTLLS 676

Query: 121  NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC- 179
            + V+  KID +++IF  + +  +     +   +++ LV SN V +  KL  +M+ +    
Sbjct: 677  SLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILP 736

Query: 180  ---VYEFLMNGLLRKGVIENAFHMHRQVIQRGF--------------------------- 209
                Y  L++GL + G +E AF+M  ++ + G                            
Sbjct: 737  DLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIF 796

Query: 210  --------VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
                    VP++VT + ++  L   G++  A   F+  +  G  PNV  +S+LI++F K+
Sbjct: 797  RAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKK 856

Query: 262  AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
              +++A +L+  M      P+++ Y+ L+ GL KAGRL    +LL      G   D+V +
Sbjct: 857  GMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTY 916

Query: 322  SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
            + ++D    +G V  A   + RM   G +P+VI+++ LI+ L +  +L+EAC LF  +  
Sbjct: 917  NILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEE 976

Query: 382  RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
                PS++TY+ LID   ++GK+ +   ++  M  +G  PD +   ++
Sbjct: 977  EGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 242/466 (51%), Gaps = 11/466 (2%)

Query: 146 SPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFH 199
           +P +++  +++  LV          L + M  KG          L+N     G +  +F 
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFS 188

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +  ++++ G+ PN +    ++K LC+ G++  +    D ++  G + N V++ TL+N  C
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K  +   A +L  ++ +    PD+++Y+ +IDGL K   + E  +       RG+  DV+
Sbjct: 249 KIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVI 308

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            +S+++  +   G +  A    + M      P+V +Y+ILI  LC++G+L EA  L G +
Sbjct: 309 TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM 368

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
               ++P+++TYS+L+DG+C  G++ +   ++  M++  + P     +++INGL     +
Sbjct: 369 TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSV 428

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A+    + +   ++PN   +N+L+DG C+  R T  + L   +       DVIT+T L
Sbjct: 429 DEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSL 488

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           + G+    +L  AI LF +M +RG+ P+  TY+A+I GL KG  +     +F+ +   G 
Sbjct: 489 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGC 548

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             D+  YNV++  L KE  LD AL +  ++ D G  PD +T+  II
Sbjct: 549 CIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIII 594



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 233/432 (53%), Gaps = 7/432 (1%)

Query: 180 VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           + EF  ++  L++      A  + +Q+  +G  P++VT + ++   C  GQ+  + S+  
Sbjct: 132 IIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLG 191

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L +G +PN +  +TL+   C + +++K+   ++ ++      + + Y  L++GL K G
Sbjct: 192 KILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 251

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
             +   +LL    DR  + DVV++++++D       V  A   Y  M + G  P+VI+YS
Sbjct: 252 ETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYS 311

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G C  G+L+ A  L  ++ ++ + P + TY+ LID  CK GKL++  +L   M K 
Sbjct: 312 TLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKE 371

Query: 418 GLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G+KP+ V  S L++G  L+G+   A + F   V+  + P++  +N +++G C+ K   + 
Sbjct: 372 GVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEA 431

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           + L   M   N+ P+ +T+  LI G+   G ++SA+ L  ++  RG   DVITY++++ G
Sbjct: 432 MNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDG 491

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K +N+   + +F  M+  G+ P+   Y  L++ L K   L  A KLF  +  +G   D
Sbjct: 492 LCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCID 551

Query: 593 IITYNTIICGYC 604
           + TYN +I G C
Sbjct: 552 VYTYNVMIGGLC 563



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 229/478 (47%), Gaps = 34/478 (7%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S LI  +  +G++  S  +   +  +G   +  ++  LM  L     V +       +  
Sbjct: 171 SILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVA 230

Query: 176 KGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF +    Y  L+NGL + G    A  + R +  R   P++V  N I+  LC +  +  
Sbjct: 231 QGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNE 290

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A   +  +   G  P+V+T+STLI  FC   +L  AF L N M   ++ PD+  Y+ILID
Sbjct: 291 AYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILID 350

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G+LKE   LL      G+K +VV +S++MD Y  +G+V  A Q +  M+     P
Sbjct: 351 ALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNP 410

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V SY+I+I GLC+   + EA  L  ++L + + P+ +TY+SLIDG CKSG++     L 
Sbjct: 411 SVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLM 470

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             +  RG   D +                               + +L+DG C+ +    
Sbjct: 471 KELHHRGQPADVIT------------------------------YTSLLDGLCKNQNLDK 500

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            + LFM M    I+P+  T+T LI G+     L +A  LF  +L +G   DV TY+ +I 
Sbjct: 501 AIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIG 560

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           GL K   +   L M   ME NG  PD   + +++  L ++   D A KL  ++  +GL
Sbjct: 561 GLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 210/400 (52%), Gaps = 5/400 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P+I+   KIL  L        A SL   + + G +P++VT S LIN FC   ++  +F 
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFS 188

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +   ++++   P+ II + L+ GL   G +K+        + +G +++ V + ++++   
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            IG+   A++    + +    P+V+ Y+ +I GLC+   + EA   + ++  R + P ++
Sbjct: 249 KIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVI 308

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           TYS+LI GFC +G+L   FSL + M  + + PD    ++LI+ L     + +A       
Sbjct: 309 TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM 368

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            +  + PN+  ++TLMDG C +    +  ++F  M    + P V ++ ++I G+    S+
Sbjct: 369 TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSV 428

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ L  +ML + + P+ +TY+++I GL K   I+  L + K +   G   D+  Y  L
Sbjct: 429 DEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSL 488

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L+ L K  NLD A+ LF ++ +RG++P+  TY  +I G C
Sbjct: 489 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLC 528



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 197/385 (51%), Gaps = 5/385 (1%)

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
           I+  + +A S F+ +LL+   P+++ F  ++ +  K      A  L   M    + PDL+
Sbjct: 109 IHDVVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLV 168

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
             SILI+     G++     +L   L  G + + ++ +++M      G+V +++  +D++
Sbjct: 169 TLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKV 228

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +  GF  N +SY  L+ GLC+ G    A  L   +  R   P ++ Y+++IDG CK   +
Sbjct: 229 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLV 288

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLING--LMGDALRFFFQSVRMTLI---PNLFIFNTL 459
            + +  Y  M  RG+ PD +  S LI G  L G  +  F     MTL    P+++ +  L
Sbjct: 289 NEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTIL 348

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +D  C+  +  +   L  +M    +KP+V+T++ L+ G    G + +A  +F  M++  +
Sbjct: 349 IDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV 408

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P V +Y+ +I+GL KGK++   +++ + M    V P+   YN L++ L K   + +AL 
Sbjct: 409 NPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALD 468

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           L  +L  RG   D+ITY +++ G C
Sbjct: 469 LMKELHHRGQPADVITYTSLLDGLC 493



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 143/276 (51%), Gaps = 8/276 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLVDS--NSVGQYYK 168
           Y+ LI+   + GK+ E+  +   M+  G+   P++V    LM   CLV    N+   ++ 
Sbjct: 345 YTILIDALCKEGKLKEAKNLLGVMTKEGV--KPNVVTYSTLMDGYCLVGEVHNAKQIFHA 402

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + +       C Y  ++NGL +   ++ A ++ R+++ +  VPN VT N ++  LC +G+
Sbjct: 403 MVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGR 462

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +A  L   L   G   +V+T+++L++  CK   L+KA  L+  M E  + P+   Y+ 
Sbjct: 463 ITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 522

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDGL K  RLK   +L    L +G  +DV  ++ ++      G +  A+    +M + G
Sbjct: 523 LIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNG 582

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
            +P+ +++ I+I+ L ++    +A  L  +++ + L
Sbjct: 583 CIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 4/240 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS L++ Y  +G++  + +IF  M    +  S      +++ L    SV +   L R M 
Sbjct: 380 YSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREML 439

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K        Y  L++GL + G I +A  + +++  RG   +++T   +L  LC N  + 
Sbjct: 440 HKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLD 499

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +LF  +   G +PN  T++ LI+  CK A+L+ A +L+  ++      D+  Y+++I
Sbjct: 500 KAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMI 559

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K G L E   +     D G   D V F  ++ +     +  +A +    M+  G L
Sbjct: 560 GGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/266 (19%), Positives = 110/266 (41%), Gaps = 28/266 (10%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +PN+++ SILI  L   G++  +  + G++L    +P+ +T ++L+      G+ R  
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLM-----KGETRCA 60

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-------ALRFFFQSVRMTLIPNLFIFNTLM 460
             L   +  R  +P   + S L + +             F+F S      P++       
Sbjct: 61  IKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQP----PSIH------ 110

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
                     D V  F  M +    P +I    ++  +       +AI L  QM  +G+ 
Sbjct: 111 ------DVVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIE 164

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD++T S +I+       ++    +   + + G  P+  I   L+  L  +  +  +L  
Sbjct: 165 PDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHF 224

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSL 606
             ++  +G + + ++Y T++ G C +
Sbjct: 225 HDKVVAQGFQMNQVSYGTLLNGLCKI 250


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 167/677 (24%), Positives = 291/677 (42%), Gaps = 105/677 (15%)

Query: 28  SDLQFNQANAILANLIKTNNPTPAIQ------FFKWTHN--CVSSPNIAQLIHV---LLQ 76
           SD+    + A L++L++  N +P +       FF W+      S+P      H+   L  
Sbjct: 73  SDIPSRLSPAALSSLLRRCNSSPRLHPKLLLDFFYWSRTRLAPSAPAPDAFAHLAVSLCA 132

Query: 77  SDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS-------FLIENYVRIGKID 129
           + +   A+ + D+M+  +            +L   G D          L++ Y + G++ 
Sbjct: 133 AGLYPQANGLLDQMIRAYPTPPLVLSSVHRALS--GSDQGRRPVVLDVLVDTYKKTGRVR 190

Query: 130 ESVEIFAYMSDMGIY---------------------------------LSPDLV--QRLM 154
           +  E+   M D+G+                                  +SPD+     L+
Sbjct: 191 DGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLI 250

Query: 155 SCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
                   +    K+   MR  G       Y  L+ GL R G IE AF   +++   G V
Sbjct: 251 EAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLV 310

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+  T   I+  LC  G+   A  L D +   G  PNVV +STLI+ F ++   ++AF++
Sbjct: 311 PDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKI 370

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M    + P+ I Y  LI GL K GR+   + +L      G   D + ++ V++ ++ 
Sbjct: 371 VKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLR 430

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
             +   A    + M  GG  PNV +YSI+I GLCQ G    A GL  Q++   L+P+   
Sbjct: 431 QHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFV 490

Query: 391 YSSLIDGFCKS-----------------------------------GKLRDGFSLYDNMI 415
           Y+ LI G+C+                                    GK+ +    YD M+
Sbjct: 491 YAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEML 550

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR---LK 467
           ++G +P+      LI+G      +  A +   Q +   L PN FI+  +++G  +   L+
Sbjct: 551 EKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLE 610

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           + + T+K  +  G+    PD   + ++I  ++S G + +A+ +   + K GL PD + Y 
Sbjct: 611 KVSSTLKSMLEKGLM---PDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYG 667

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           ++I G  K  ++   + +   M + G+ P I+ YN L++   K  ++  A  +F  +  +
Sbjct: 668 SLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICK 727

Query: 588 GLEPDIITYNTIICGYC 604
           GL P+ +TY T+I GYC
Sbjct: 728 GLPPNCVTYTTLIDGYC 744



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 141/563 (25%), Positives = 241/563 (42%), Gaps = 73/563 (12%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N ++   ++ +N   A            SPN+   + +I+ L Q    + AS + ++M+ 
Sbjct: 422 NLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIA 481

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
              K   F              Y+ LI  Y R G    + E    M+     L+PDL   
Sbjct: 482 DGLKPNAFV-------------YAPLISGYCREGSFSLACETLKKMTREN--LTPDL--- 523

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                                    +C Y  L+ GL   G ++ A   + +++++GF PN
Sbjct: 524 -------------------------YC-YNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPN 557

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
             T   ++    + G +  A  L   +L  G  PN   ++ ++  + K   LEK      
Sbjct: 558 DFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLK 617

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M+E  L+PD  +Y I+I  L  +G ++    +L      GL  D +++ S++  +    
Sbjct: 618 SMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAA 677

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           D+ +AV   D M   G  P +  Y+ LI G C+   +  A  +F  ++ + L P+ +TY+
Sbjct: 678 DMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYT 737

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLI 450
           +LIDG+CK+G +RD   LY+ M+  G+ PDA V S+L  G    GD  +  F +  M   
Sbjct: 738 TLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIAR 797

Query: 451 PNLFI--FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
               I  FNTL+ G C+  +  +TVK   +M   +I P ++T   ++ G+   G LS A 
Sbjct: 798 GYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAH 857

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +F ++ ++  +     + +                +F  M   G+ P     +V+ NM+
Sbjct: 858 TIFVELQQKNASHRDTDHLS---------------SLFTDMINQGLVP----LDVIHNMI 898

Query: 569 IKECN---LDAALKLFGQLTDRG 588
              C    LD AL L   L  +G
Sbjct: 899 QSHCKQGYLDKALMLHDALVAKG 921



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 159/384 (41%), Gaps = 47/384 (12%)

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC  G    A+ L D ++   P P +V  S                 ++  +   D    
Sbjct: 130 LCAAGLYPQANGLLDQMIRAYPTPPLVLSS-----------------VHRALSGSDQGRR 172

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
            ++  +L+D   K GR+++G E++L   D GL   +   + ++   +    +    +   
Sbjct: 173 PVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRG 232

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M   G  P+V +YS LI+  C+   L  A  +  ++       +++TY++LI G C++G
Sbjct: 233 FMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAG 292

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            + + F     M   GL PD                               F +  +++G
Sbjct: 293 AIEEAFGYKKEMEDYGLVPDG------------------------------FTYGAIING 322

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+  R      L   M    + P+V+ ++ LI G   QG+   A  +  +M   G+ P+
Sbjct: 323 LCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPN 382

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            ITY  +I GL K   +     + K M + G   D   YN+++   +++ N + A  L  
Sbjct: 383 KITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLN 442

Query: 583 QLTDRGLEPDIITYNTIICGYCSL 606
           ++   G+ P++ TY+ II G C +
Sbjct: 443 EMRKGGISPNVYTYSIIINGLCQI 466


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/542 (26%), Positives = 257/542 (47%), Gaps = 44/542 (8%)

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
            G  G  Y  L+  YV+  K+ E  E F  +   G+ +S +   +L+  LV +  V   +
Sbjct: 183 FGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAW 242

Query: 168 K-----------------------LCRA------------MRGKG----FCVYEFLMNGL 188
           +                       LC+             M GKG       Y  L+N  
Sbjct: 243 EIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAY 302

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
            R+G++E AF +      RG  P ++T N IL  LC  G+   A  +   +L +G  PN 
Sbjct: 303 CREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNA 362

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
            T++TL+   C+   + +A ++++ M    ++PDL+ +S LI  L + G L +       
Sbjct: 363 ATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFRE 422

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
               G+  D V+++ ++D +   G +  A++  D ML  G   +V++Y+  + GLC++  
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
             +A  LF +++ R + P   T+++LI G+CK G +    +L++ M++  LKPD V  + 
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LI+G      MG A   +   +R  +IP+   + T+++G C      + + L   M    
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           I+P+++T   LI+G    G +  A     +M+  G+ PD  +Y+ +I G  K  N+    
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +   ME+ G+  +I  YN++LN    E  +  A ++  ++ + G+ PD  TY+++I G+
Sbjct: 663 ILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGH 722

Query: 604 CS 605
            S
Sbjct: 723 VS 724



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 206/401 (51%), Gaps = 25/401 (6%)

Query: 64  SPNIAQLIHVLLQSDMRD---VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE 120
           +PN A    +L++   RD    A  +FD+M              R  L D    +S LI 
Sbjct: 359 TPNAATYNTLLVEICRRDNILEAQEIFDEMS------------RRGVLPDL-VSFSSLIG 405

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG--- 177
              R G + +++  F  M   GI     +   L+     + ++    K+   M  +G   
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465

Query: 178 -FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
               Y   +NGL +K +  +A  +  ++++RG VP+  T   +++  C +G +  A +LF
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + ++    KP+ VT++TLI+ FCK  ++ +A +L++ M+  D++PD I Y  +++G   +
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G L E   L    L++G++ ++V  ++++  Y   GD+ +A +   +M++ G +P+  SY
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI G  ++  L +A  L  ++  R L+ +++TY+ +++GFC  GK+++   +   MI+
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
            G+ PD    S LING      M +A RF  + ++  L+P+
Sbjct: 706 IGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 105/221 (47%), Gaps = 15/221 (6%)

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR-GLKPDAVVCSLLINGLMGDALRFFFQSV 445
           S L+ S+++    +  +L +  +    M+++ G+    VV SL+       +  F+F SV
Sbjct: 134 SSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLI-------STCFYFGSV 186

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
            +       I++ L+    + K+  +  + F ++    +   +     L+ G+   G + 
Sbjct: 187 GL-------IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD 239

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  ++ ++++ G+  +V T + +++ L K +     +     ME  GV  DI  YN L+
Sbjct: 240 LAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLI 299

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           N   +E  ++ A +L    + RG+EP ++TYN I+ G C +
Sbjct: 300 NAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 96/247 (38%), Gaps = 48/247 (19%)

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           L+  C  FG V         L Y  L+  + ++ KLR+G   +  + ++G+      C+ 
Sbjct: 176 LISTCFYFGSVG--------LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNK 227

Query: 429 LINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           L+ GL+       A   + + VR  +  N++  N +++  C+  R  + V  F+      
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCK-DRKFENVMFFL------ 280

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
                                         M  +G+  D++TY+ +I+   +   +    
Sbjct: 281 ----------------------------SDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +       G+ P +  YN +L  L K    D A  +  ++   GL P+  TYNT++   
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372

Query: 604 CSLNSCL 610
           C  ++ L
Sbjct: 373 CRRDNIL 379


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 221/419 (52%), Gaps = 9/419 (2%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G +  A  +  ++   GF P+  T   I+  +   G +  A    D L  +G  PNVVT+
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTY 60

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + LI AF +  KLE+A +L   M E    P+L+ Y++L+D L K   +    +++   ++
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G   +V+ F+S++D +   G+V  A +    M+  G  PNV++YS LI GLC+  + +E
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  +  ++    + P   TYS+LI G CK+ K+ +   +   M   G  PD VV S +I+
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240

Query: 432 -----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL-KRATDTVKLFMLMGMYNIK 485
                G + +A +   +  +    P++  +NT++DG C+L K A   V L  +    ++ 
Sbjct: 241 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVL 300

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PDV+T++ +I G+     L  A  L  +M K G  PDV+TY+ II GL K   +    ++
Sbjct: 301 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL 360

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            + M+R G AP++  Y  L++ L K   +D A ++  ++ + G  P+++TYNT++ G C
Sbjct: 361 LQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLC 419



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 205/423 (48%), Gaps = 31/423 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+    R   +E A  +  ++ +RG  PN+VT N ++  LC    +G A  +   +
Sbjct: 59  TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PNV+TF++L++ FCK   ++ A +L  +M+   + P+++ YS LIDGL K+ + 
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  E+L      G+  D   +S+++        +  A Q   RM   G  P+V+ YS +
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 238

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I   C+ G+L+EA     ++  +R  P ++TY+++IDG CK GK+ +   + D M + G 
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG- 297

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
                                        ++P++  ++T+++G C+     +  KL   M
Sbjct: 298 ----------------------------DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 329

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                 PDV+T+T +I G+   G L  A  L   M + G  P+V+TY+ +I GL K + +
Sbjct: 330 CKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKV 389

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE--PDIITYN 597
                + + M   G  P++  YN ++N L     +  A +L  ++ D   E  PD  TY 
Sbjct: 390 DEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYR 449

Query: 598 TII 600
           TI+
Sbjct: 450 TIV 452



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 144/280 (51%), Gaps = 8/280 (2%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           GD+  A++  + M + GF P+  +++ +I  +   G L    G    +     +P+++TY
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVVTY 60

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
           ++LI  F ++ KL +   L + M +RG  P+ V  ++L++ L     +G A     + + 
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
               PN+  FN+L+DG C+     D  KL  +M    ++P+V+T++ LI G+        
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +  +M   G+TPD  TYSA+IHGL K   I     M + M  +G  PD+ +Y+ +++
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              K   L  A K   ++  +   PD++TYNT+I G C L
Sbjct: 241 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKL 280


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 243/476 (51%), Gaps = 9/476 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+   + GK++++ ++F  +   G+  S      L+  L  +NS     +L   M 
Sbjct: 13  YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  +++   ++G++E A  + +++I+ G VP++VT N ++  LC +G++ 
Sbjct: 73  RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVE 132

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF+ +  +G  PN  + +T+I   C+++K+++A Q+++ M   D+ PD   Y ILI
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILI 192

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL KAG+L E  +L    LD G+    V ++ V+        +  A++ +  M + G  
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +++ILI   C++G++ EA  L  ++      P ++TYS+LI G C   ++ D   L
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            ++M+KR  KP  V  + LI+GL     + +A       V     P++  +NTL+ G CR
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +     +L   M    + P+V+T+T L+ G+     L  A  +F QM   G  P++ T
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           Y+A+I G      +  GL +F  M   G++PD  +Y  L   L K      AL++ 
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 207/407 (50%), Gaps = 5/407 (1%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           +R   P+  +   ++  L   G++ +A  LF  LL  G  P+ V +++LI+  C     +
Sbjct: 3   ERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
            A +L+  M      P  + Y+++ID   K G L+E  +L+   ++ G   DVV +++VM
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           D     G V  A+  ++ M   G  PN  S++ +I GLCQQ ++ +AC +F ++  R + 
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP 182

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P   +Y  LIDG  K+GKL + + L+  M+  G+ P AV  +++I+G+     + +AL  
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F         P+ F FN L+D  C+  +  +  +L   M      PDV+T++ LI G+ S
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
              +  A  L   M+KR   P V+T + +IHGL K   I     +   M  +G +PD+  
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           YN L++   +    + A +L   +  RGL P+++TY  ++ G C  N
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 221/442 (50%), Gaps = 9/442 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++GL + G + +A  + ++++  G  P+ V    ++  LC+     +A  LF  + 
Sbjct: 13  YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+ VT++ +I+A CK   LE+A  L   M+E   VPD++ Y+ ++DGL K+GR++
Sbjct: 73  RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVE 132

Query: 301 EGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           E   LL   ++R G   +    ++++        + +A Q +  M      P+  SY IL
Sbjct: 133 EA-LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL 191

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GL + G+L EA  LF ++L   + PS +TY+ +I G C +  L +   L+ +M  +G 
Sbjct: 192 IDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +P     ++LI+     G M +A R   +      +P++  ++TL+ G C + R  D   
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M     KP V+T   LI G+   G +  A  +   M+  G +PDV+TY+ ++HG  
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +         +   M   G+AP++  Y  L++ L K   L  A  +F Q+   G  P++ 
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF 431

Query: 595 TYNTIICGYCSLNSCLIDGYFK 616
           TY  +I G+CS     +DG  K
Sbjct: 432 TYTALILGFCSAGQ--VDGGLK 451



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 167/338 (49%), Gaps = 40/338 (11%)

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M E ++ PD   Y ILIDGL KAG+L +  +L                            
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDL---------------------------- 32

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
                  + ++L+ G  P+ ++Y+ LI GLC      +A  LF  +  R   PS +TY+ 
Sbjct: 33  -------FQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 85

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           +ID  CK G L +   L   MI+ G  PD V  + +++GL     + +AL  F +  R+ 
Sbjct: 86  IIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLG 145

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
             PN    NT++ G C+  +     ++F  M   +I PD  ++ +LI G+A  G L+ A 
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAY 205

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            LF +ML  G+TP  +TY+ +IHG+     +   L +FK M   G  P    +N+L++  
Sbjct: 206 KLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            K   +D A +L  ++TD G  PD++TY+T+I G CS+
Sbjct: 266 CKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 186/430 (43%), Gaps = 33/430 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN----------------IAQLIHVLLQSDM 79
           N ++  L K+     A+  F        +PN                I Q   V  + + 
Sbjct: 119 NTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178

Query: 80  RDVASHVFDKMVI-----QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIG-----KID 129
           RD+    +   ++     + GK    ++LFR  L D G   S +  N V  G      +D
Sbjct: 179 RDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRML-DSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLM 185
           E++E+F  M   G   S      L+        + + ++L + M   G       Y  L+
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           +GL     +++A H+   +++R   P +VT N ++  LC  G+I  A  + D ++  G  
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+VVT++TL++  C+  + E+A +L + M+   L P+++ Y+ L+ GL KA RL E   +
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 417

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
                  G   ++  +++++  +   G V   ++ +  M+  G  P+ + Y  L   LC+
Sbjct: 418 FAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCK 477

Query: 366 QGRLVEACGLF--GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
            GR   A  +   G+  +R        Y   +DG   +GK+        +M++ G  P  
Sbjct: 478 SGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAP 537

Query: 424 VVCSLLINGL 433
             C+ L+ GL
Sbjct: 538 ERCASLVAGL 547



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 26/304 (8%)

Query: 95  GKTYNFFRLFRDSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           GK    FRL +  + D G       YS LI     I ++D++  +   M  +     P +
Sbjct: 269 GKMDEAFRLLK-RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM--VKRQCKPTV 325

Query: 150 VQR--LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQ 203
           V +  L+  L  +  + +  ++  AM   G       Y  L++G  R G  E A  +   
Sbjct: 326 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 385

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           ++ RG  PN+VT   ++  LC   ++  A  +F  +   G  PN+ T++ LI  FC   +
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR-------LKEGNELLLTALDRGLKL 316
           ++   +L+  M+   + PD ++Y  L   L K+GR       L+EG E L     R    
Sbjct: 446 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL-----RSEAW 500

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
              V+   +D  +  G +  A+     M+ GG LP     + L+ GLC+ G+  EA  + 
Sbjct: 501 GDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 560

Query: 377 GQVL 380
            +++
Sbjct: 561 EEIM 564


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 269/544 (49%), Gaps = 36/544 (6%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFG-CDYSFLIENYVRI-----GKIDESVEIFA 136
           A HVFD++ ++ G+  + + L R +L D      +  +  Y R+     GK+  +V  +A
Sbjct: 39  ARHVFDEL-LRRGRGASIYGLNR-ALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKG 192
                           L+ C   +  +   +     +  KGF V    +  L+ GL    
Sbjct: 97  I---------------LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADK 141

Query: 193 VIENAFHMH-RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV---GPKPNV 248
              +A  +  R++ + G +P++ + N +LK LC   +   A  L  ++      G  P+V
Sbjct: 142 RTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDV 201

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           V+++T++N F KE   +KA+  Y+ M++  ++PD++ YS +I  L KA  + +  E+L T
Sbjct: 202 VSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT 261

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
            +  G+  D + ++S++  Y   G    A+ T  +M + G  PNV++YS L+  LC+ GR
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA----- 423
             EA  +F  +  R LEP + TY +L+ G+   G L +  +L D M++ G++PD      
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           ++C+      +  A+  F +  +  L PN+  + T++D  C+     D +  F  M    
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           + P++I +T LI G+ +      A  L  +ML RG+  + I +++II    K   +    
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +F LM R GV PDI  YN L++       +D A KL   +   G++PDI+TY T+I GY
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 604 CSLN 607
           C ++
Sbjct: 562 CRVS 565



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 246/488 (50%), Gaps = 16/488 (3%)

Query: 134 IFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM---RGKG----FCVYEFL 184
           +   M+++G    PD+     L+  L D N   +  +L   M   RG G       Y  +
Sbjct: 150 VLRRMTELGCI--PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           +NG  ++G  + A+  + +++ RG +P++VT + I+  LC    +  A  + + ++  G 
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
            P+ +T++++++ +C   + ++A      M    + P+++ YS L++ L K GR  E  +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +  +   RGL+ D+  + +++  Y   G +       D M+  G  P+   ++ILI    
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           +Q ++ +A  +F ++    L P+++ Y ++ID  CKSG + D    ++ MI  GL P+ +
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           V + LI+GL        A     + +   +  N   FN+++D  C+  R  ++ KLF LM
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               +KPD+IT+  LI G    G +  A  L   M+  G+ PD++TY  +I+G  +   +
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              L +FK M  +GV+P+I  YN++L  L       AA +L+  +T  G + ++ TYN I
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 627

Query: 600 ICGYCSLN 607
           + G C  N
Sbjct: 628 LHGLCKNN 635



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 258/522 (49%), Gaps = 17/522 (3%)

Query: 96  KTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSD-MGIYLSPDL 149
           +T +   +    + + GC      Y+ L++      +  E++E+   M+D  G    PD+
Sbjct: 142 RTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDV 201

Query: 150 VQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQ 203
           V    +++         + Y     M  +G       Y  ++  L +   ++ A  +   
Sbjct: 202 VSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT 261

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +++ G +P+ +T N IL   C +GQ   A      +   G +PNVVT+S+L+N  CK  +
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
             +A ++++ M +  L PD+  Y  L+ G    G L E + LL   +  G++ D  VF+ 
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++ AY     V +A+  + +M   G  PNV+ Y  +I  LC+ G + +A   F Q++   
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDAL 438
           L P+++ Y+SLI G C   K      L   M+ RG+  + +  + +I+     G + ++ 
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           + F   VR+ + P++  +NTL+DGCC   +  +  KL   M    +KPD++T+  LI G 
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                +  A+ LF +M+  G++P++ITY+ I+ GLF  +  +    ++  + ++G   ++
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           + YN++L+ L K    D AL++F  L    L+ +  T+N +I
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 252/494 (51%), Gaps = 13/494 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  + + G  D++   +  M D GI   PD+V    +++ L  + ++ +  ++   
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGIL--PDVVTYSSIIAALCKAQAMDKAMEVLNT 261

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  +++G    G  + A    +++   G  PN+VT + ++  LC NG+
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +FD +   G +P++ T+ TL+  +  +  L +   L +LM+   + PD  +++I
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    K  ++ +   +       GL  +VV + +V+D     G V  A+  +++M++ G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN+I Y+ LI GLC   +  +A  L  ++L R +  + + ++S+ID  CK G++ +  
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D M++ G+KPD +  + LI+G      M +A +     V + + P++  + TL++G 
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           CR+ R  D + LF  M    + P++IT+ ++++G+      ++A  L+  + K G   ++
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ I+HGL K       L MF+ +    +  +   +N+++  L+K   +D A  LF  
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681

Query: 584 LTDRGLEPDIITYN 597
            +  GL PD+ TY+
Sbjct: 682 HSANGLVPDVRTYS 695



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 230/474 (48%), Gaps = 13/474 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y   G+  E++     M   G+   P++V    LM+ L  +    +  K+  +
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGV--EPNVVTYSSLMNYLCKNGRSTEARKIFDS 331

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  P+    N ++       +
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 391

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  PNVV + T+I+  CK   ++ A   +  M++  L P++I+Y+ 
Sbjct: 392 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 451

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL    +  +  EL+L  LDRG+ L+ + F+S++D++   G V  + + +D M+  G
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++I+Y+ LI G C  G++ EA  L   ++   ++P ++TY +LI+G+C+  ++ D  
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+  M+  G+ P+ +  ++++ GL        A   +    +      L  +N ++ G 
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+     + +++F  + + +++ +  T  ++I  +   G +  A  LF      GL PDV
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            TYS +   L +  ++     +F  ME NG + D  + N ++  L++  ++  A
Sbjct: 692 RTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 198/405 (48%), Gaps = 20/405 (4%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---DLVPDLIIYS 287
           +A  +FD LL  G   ++   +  +    + +    A   YN M       + P +  Y+
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLN 346
           ILI    +AGRL  G   L   + +G ++D + F+ ++           A+     RM  
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR---LEPSLLTYSSLIDGFCKSGK 403
            G +P+V SY+ L+KGLC + R  EA  L   +   R     P +++Y+++++GF K G 
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
               +S Y  M+ RG+ PD V  S +I  L     M  A+      V+  ++P+   +N+
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C   +  + +     M    ++P+V+T++ L+  +   G  + A  +F  M KRG
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           L PD+ TY  ++ G +  K   V +H +  LM RNG+ PD  ++N+L+    K+  +D A
Sbjct: 337 LEPDIATYRTLLQG-YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 578 LKLFGQLTDRGLEPDIITYNTII---CGYCSLNSCLIDGYFKSQI 619
           + +F ++   GL P+++ Y T+I   C   S++  ++  YF+  I
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML--YFEQMI 438



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/504 (22%), Positives = 222/504 (44%), Gaps = 25/504 (4%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N+IL     +  P  AI   K   +    PN+   + L++ L ++     A  +FD M  
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT- 333

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
                       +  L      Y  L++ Y   G + E   +   M   GI     +   
Sbjct: 334 ------------KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+        V Q   +   MR  G       Y  +++ L + G +++A     Q+I  G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PNI+    ++  LC   +   A  L   +L  G   N + F+++I++ CKE ++ ++ 
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           +L++LM+ + + PD+I Y+ LIDG   AG++ E  +LL + +  G+K D+V + ++++ Y
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             +  +  A+  +  M++ G  PN+I+Y+I+++GL    R   A  L+  +     +  L
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA-----VVCSLLINGLMGDALRFFFQ 443
            TY+ ++ G CK+    +   ++ N+    L+ +      ++ +LL  G M +A   F  
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                L+P++  ++ + +         +   LF+ M       D      ++R +  +G 
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741

Query: 504 LSSAILLFFQMLKRGLTPDVITYS 527
           ++ A    F + ++  + +  T S
Sbjct: 742 ITRAGTYLFMIDEKHFSLEASTAS 765


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 275/509 (54%), Gaps = 24/509 (4%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS-VG---QYYKLCRAM 173
           L++ Y  +G ++ ++++F  + + G+   PD+V  + S L++  S VG   + Y+L   M
Sbjct: 331 LMKGYCVLGDVNLALQLFDEVVEGGVV--PDVV--IFSVLINGCSKVGDMEKAYELYTRM 386

Query: 174 RGKGFCVYEFLMNGLLR----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           +  G     F++N LL     + ++E+A+ +  + ++ G + N+VT N +LK L   G++
Sbjct: 387 KLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTYNILLKWLGELGKV 445

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A +L++ ++  G  P++V+++ LI   CK+  ++KA+ +   ++E  L P+ + Y++L
Sbjct: 446 NEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLL 505

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN--- 346
           IDG FK G  +    +    +   +      F++V++   G+G  GR  +T D++ N   
Sbjct: 506 IDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVIN---GLGKTGRVSETQDKLNNFIK 562

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            GF+   I+Y+ +I G  ++G +  A   + ++    + P ++TY+SLIDG CKS K+  
Sbjct: 563 QGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGL 622

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              ++ +M  +G+K D V  S LI+G      M  A +FF + + + L PN  ++N+++ 
Sbjct: 623 ALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMIS 682

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G   L      + L   M    +  D+  +T +I G+  +G LS A+ L+ +ML + + P
Sbjct: 683 GFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVP 742

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D++ Y+ +I+GL     +     + K M+ N + P + +YN+L+    +E NL  A +L 
Sbjct: 743 DIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLH 802

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSCL 610
            ++ D+GL PD  TY+ ++ G   ++  L
Sbjct: 803 DEMLDKGLVPDDTTYDILVNGKLKVSHTL 831



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 236/464 (50%), Gaps = 8/464 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S LI    ++G ++++ E++  M  MGI  +  +V  L+    + N +   Y L     
Sbjct: 363 FSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV 422

Query: 175 GKGFC---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
             G      Y  L+  L   G +  A ++  +++ +G  P++V+ N ++   C  G +  
Sbjct: 423 EHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDK 482

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A S+   +L  G KPN VT++ LI+ F K+   E+AF ++  MM  ++ P    ++ +I+
Sbjct: 483 AYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVIN 542

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL K GR+ E  + L   + +G     + ++S++D +   G V  A+  Y  M   G  P
Sbjct: 543 GLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISP 602

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +VI+Y+ LI GLC+  ++  A  +   +  + ++  ++ YS+LIDGFCK   +      +
Sbjct: 603 DVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFF 662

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             ++  GL P+ VV + +I+G      M  AL    + ++  +  +L ++ +++ G  + 
Sbjct: 663 TELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKE 722

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            + +  + L+  M   +I PD++ +TVLI G+++ G L +A  +  +M    +TP V+ Y
Sbjct: 723 GKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVY 782

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           + +I G F+  N+     +   M   G+ PD   Y++L+N  +K
Sbjct: 783 NILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLK 826



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 145/596 (24%), Positives = 281/596 (47%), Gaps = 58/596 (9%)

Query: 34  QANAILANLIK-TNNPTPAIQFFKWTHN----CVSSPNIAQLIHVLLQSDMRDVASHVFD 88
           + N  L  L+   +NP  A++FF           +   I+ LIH+L  S+ +  +S  F 
Sbjct: 59  KKNRFLVTLLSHKSNPKSALKFFHQVERKRGFVKTVDFISLLIHIL-SSNSKTCSSLQFL 117

Query: 89  KMVIQFGKTYNFFRLFRDSL----GDFGCD-----YSFLIENYVRIGKIDESVEIFAYMS 139
                FG      ++F + L    G +G +     +++L++++VR+ KI ++VE F  M 
Sbjct: 118 LNNYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTM- 176

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFH 199
                L  DLV  +                          +   L+  ++R+ ++ +A  
Sbjct: 177 -----LEHDLVPWV-------------------------PIMNNLLTAMVRRNMVCDARQ 206

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           ++ ++++RG   +  T + +++     G+       F      G + +   +S L+ A C
Sbjct: 207 LYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVC 266

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           +   L  A +L   M E   VP    Y+ +I    K G   E   L    +  GL ++V+
Sbjct: 267 RRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVI 326

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           V  S+M  Y  +GDV  A+Q +D ++ GG +P+V+ +S+LI G  + G + +A  L+ ++
Sbjct: 327 VTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRM 386

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLM 434
            +  ++P++   +SL++GF +   L   + L+D  ++ G+  + V  ++L+      G +
Sbjct: 387 KLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKV 445

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITH 491
            +A   + + V   + P+L  +N L+ G C+   + +A   +K  +  G+   KP+ +T+
Sbjct: 446 NEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGL---KPNAVTY 502

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           T+LI G   +G    A ++F QM+   + P   T++ +I+GL K   +S          +
Sbjct: 503 TLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIK 562

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            G       YN +++   KE  +D+AL  + ++ + G+ PD+ITY ++I G C  N
Sbjct: 563 QGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSN 618



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 101/188 (53%), Gaps = 4/188 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM- 173
           YS LI+ + ++  ++ + + F  + D+G+  +  +   ++S  +  N++     L + M 
Sbjct: 642 YSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI 701

Query: 174 RGKGFC---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           + K  C   VY  ++ GLL++G +  A  ++ +++ +  VP+IV    ++  L  NGQ+ 
Sbjct: 702 KNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLE 761

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NAS +   +      P+V+ ++ LI    +E  L++AF+L++ M++  LVPD   Y IL+
Sbjct: 762 NASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821

Query: 291 DGLFKAGR 298
           +G  K   
Sbjct: 822 NGKLKVSH 829


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 269/544 (49%), Gaps = 36/544 (6%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFG-CDYSFLIENYVRI-----GKIDESVEIFA 136
           A HVFD++ ++ G+  + + L R +L D      +  +  Y R+     GK+  +V  +A
Sbjct: 39  ARHVFDEL-LRRGRGASIYGLNR-ALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKG 192
                           L+ C   +  +   +     +  KGF V    +  L+ GL    
Sbjct: 97  I---------------LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADK 141

Query: 193 VIENAFHMH-RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV---GPKPNV 248
              +A  +  R++ + G +P++ + N +LK LC   +   A  L  ++      G  P+V
Sbjct: 142 RTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDV 201

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           V+++T++N F KE   +KA+  Y+ M++  ++PD++ YS +I  L KA  + +  E+L T
Sbjct: 202 VSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT 261

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
            +  G+  D + ++S++  Y   G    A+ T  +M + G  PNV++YS L+  LC+ GR
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA----- 423
             EA  +F  +  R LEP + TY +L+ G+   G L +  +L D M++ G++PD      
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           ++C+      +  A+  F +  +  L PN+  + T++D  C+     D +  F  M    
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           + P++I +T LI G+ +      A  L  +ML RG+  + I +++II    K   +    
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +F LM R GV PDI  YN L++       +D A KL   +   G++PDI+TY T+I GY
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 604 CSLN 607
           C ++
Sbjct: 562 CRVS 565



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 246/488 (50%), Gaps = 16/488 (3%)

Query: 134 IFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM---RGKG----FCVYEFL 184
           +   M+++G    PD+     L+  L D N   +  +L   M   RG G       Y  +
Sbjct: 150 VLRRMTELGCI--PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           +NG  ++G  + A+  + +++ RG +P++VT + I+  LC    +  A  + + ++  G 
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
            P+ +T++++++ +C   + ++A      M    + P+++ YS L++ L K GR  E  +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +  +   RGL+ D+  + +++  Y   G +       D M+  G  P+   ++ILI    
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           +Q ++ +A  +F ++    L P+++ Y ++ID  CKSG + D    ++ MI  GL P+ +
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           V + LI+GL        A     + +   +  N   FN+++D  C+  R  ++ KLF LM
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               +KPD+IT+  LI G    G +  A  L   M+  G+ PD++TY  +I+G  +   +
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              L +FK M  +GV+P+I  YN++L  L       AA +L+  +T  G + ++ TYN I
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 627

Query: 600 ICGYCSLN 607
           + G C  N
Sbjct: 628 LHGLCKNN 635



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 254/510 (49%), Gaps = 17/510 (3%)

Query: 108 LGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSD-MGIYLSPDLVQ--RLMSCLVD 159
           + + GC      Y+ L++      +  E++E+   M+D  G    PD+V    +++    
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
                + Y     M  +G       Y  ++  L +   ++ A  +   +++ G +P+ +T
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N IL   C +GQ   A      +   G +PNVVT+S+L+N  CK  +  +A ++++ M 
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           +  L PD+  Y  L+ G    G L E + LL   +  G++ D  VF+ ++ AY     V 
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           +A+  + +M   G  PNV+ Y  +I  LC+ G + +A   F Q++   L P+++ Y+SLI
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLI 450
            G C   K      L   M+ RG+  + +  + +I+     G + ++ + F   VR+ + 
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 513

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P++  +NTL+DGCC   +  +  KL   M    +KPD++T+  LI G      +  A+ L
Sbjct: 514 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 573

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F +M+  G++P++ITY+ I+ GLF  +  +    ++  + ++G   +++ YN++L+ L K
Sbjct: 574 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK 633

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               D AL++F  L    L+ +  T+N +I
Sbjct: 634 NNLTDEALRMFQNLCLTDLQLETRTFNIMI 663



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 254/494 (51%), Gaps = 13/494 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  + + G  D++   +  M D GI   PD+V    +++ L  + ++ +  ++   
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGIL--PDVVTYSSIIAALCKAQAMDKAMEVLNT 261

Query: 173 MRGKGF---CV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G    C+ Y  +++G    G  + A    +++   G  PN+VT + ++  LC NG+
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +FD +   G +P++ T+ TL+  +  +  L +   L +LM+   + PD  +++I
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    K  ++ +   +       GL  +VV + +V+D     G V  A+  +++M++ G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN+I Y+ LI GLC   +  +A  L  ++L R +  + + ++S+ID  CK G++ +  
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D M++ G+KPD +  + LI+G      M +A +     V + + P++  + TL++G 
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           CR+ R  D + LF  M    + P++IT+ ++++G+      ++A  L+  + K G   ++
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ I+HGL K       L MF+ +    +  +   +N+++  L+K   +D A  LF  
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681

Query: 584 LTDRGLEPDIITYN 597
            +  GL PD+ TY+
Sbjct: 682 HSANGLVPDVRTYS 695



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 230/474 (48%), Gaps = 13/474 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y   G+  E++     M   G+   P++V    LM+ L  +    +  K+  +
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGV--EPNVVTYSSLMNYLCKNGRSTEARKIFDS 331

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  P+    N ++       +
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 391

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  PNVV + T+I+  CK   ++ A   +  M++  L P++I+Y+ 
Sbjct: 392 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 451

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL    +  +  EL+L  LDRG+ L+ + F+S++D++   G V  + + +D M+  G
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++I+Y+ LI G C  G++ EA  L   ++   ++P ++TY +LI+G+C+  ++ D  
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+  M+  G+ P+ +  ++++ GL        A   +    +      L  +N ++ G 
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+     + +++F  + + +++ +  T  ++I  +   G +  A  LF      GL PDV
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            TYS +   L +  ++     +F  ME NG + D  + N ++  L++  ++  A
Sbjct: 692 RTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 198/405 (48%), Gaps = 20/405 (4%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---DLVPDLIIYS 287
           +A  +FD LL  G   ++   +  +    + +    A   YN M       + P +  Y+
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLN 346
           ILI    +AGRL  G   L   + +G ++D + F+ ++           A+     RM  
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR---LEPSLLTYSSLIDGFCKSGK 403
            G +P+V SY+ L+KGLC + R  EA  L   +   R     P +++Y+++++GF K G 
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
               +S Y  M+ RG+ PD V  S +I  L     M  A+      V+  ++P+   +N+
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C   +  + +     M    ++P+V+T++ L+  +   G  + A  +F  M KRG
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           L PD+ TY  ++ G +  K   V +H +  LM RNG+ PD  ++N+L+    K+  +D A
Sbjct: 337 LEPDIATYRTLLQG-YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 578 LKLFGQLTDRGLEPDIITYNTII---CGYCSLNSCLIDGYFKSQI 619
           + +F ++   GL P+++ Y T+I   C   S++  ++  YF+  I
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML--YFEQMI 438



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 112/504 (22%), Positives = 222/504 (44%), Gaps = 25/504 (4%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N+IL     +  P  AI   K   +    PN+   + L++ L ++     A  +FD M  
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT- 333

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
                       +  L      Y  L++ Y   G + E   +   M   GI     +   
Sbjct: 334 ------------KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+        V Q   +   MR  G       Y  +++ L + G +++A     Q+I  G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PNI+    ++  LC   +   A  L   +L  G   N + F+++I++ CKE ++ ++ 
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           +L++LM+ + + PD+I Y+ LIDG   AG++ E  +LL + +  G+K D+V + ++++ Y
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             +  +  A+  +  M++ G  PN+I+Y+I+++GL    R   A  L+  +     +  L
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA-----VVCSLLINGLMGDALRFFFQ 443
            TY+ ++ G CK+    +   ++ N+    L+ +      ++ +LL  G M +A   F  
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                L+P++  ++ + +         +   LF+ M       D      ++R +  +G 
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741

Query: 504 LSSAILLFFQMLKRGLTPDVITYS 527
           ++ A    F + ++  + +  T S
Sbjct: 742 ITRAGTYLFMIDEKHFSLEASTAS 765


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 242/480 (50%), Gaps = 15/480 (3%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC---- 179
           GK+++     + + + G+Y  PD+V    L+S       + + ++L  AM  KGF     
Sbjct: 239 GKMEKVGTFLSEVQEKGVY--PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVY 296

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NGL + G  E A  +  ++++ G  P+  T   +L   C  G      ++F  +
Sbjct: 297 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDM 356

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P++V FS++++ F +   L+KA   +N + E  L+PD +IY+ILI G  + G +
Sbjct: 357 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 416

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   L    L +G  +DVV +++++        +G A + ++ M   G  P+  + +IL
Sbjct: 417 SEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTIL 476

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+ G L  A  LF ++  +R++  ++TY++L+DGF K G +     ++ +M+ + +
Sbjct: 477 IDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 536

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P  +  S+L+N L     + +A R + + +  ++ P + I N+++ G CR   A+D   
Sbjct: 537 LPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEI 596

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR--GLTPDVITYSAIIHG 532
               M      PD I++  LI G   + ++S A  L  +M ++  GL PDV TY++I+HG
Sbjct: 597 FLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHG 656

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
             +   +     + + M   GV PD + Y  L+N  + + NL  A +   ++  RG  PD
Sbjct: 657 FCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 276/560 (49%), Gaps = 15/560 (2%)

Query: 63  SSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG----KTYNFFRLFRDSLGDFGCDYSFL 118
           +S +++ +IH+L++S     A     +M+ + G    +  N       + G     +  L
Sbjct: 102 TSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLL 161

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR--GK 176
           I  +V+  K+ E+ E F  +   G  +S D    L+  LV    V   +++ + +   G 
Sbjct: 162 IRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGV 221

Query: 177 GFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G  VY    ++N L + G +E       +V ++G  P+IVT N ++      G +  A  
Sbjct: 222 GVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFE 281

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   +   G  P V T++T+IN  CK  K E+A +++  M+   L PD   Y  L+    
Sbjct: 282 LMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 341

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G   E   +      R +  D+V FSS+M  +   G++ +A+  ++ +   G +P+ +
Sbjct: 342 KKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 401

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ILI+G C++G + EA  L  ++L +     ++TY++++ G CK   L +   L++ M
Sbjct: 402 IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 461

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            +RGL PD+   ++LI+G      + +A+  F +     +  ++  +NTL+DG  ++   
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
               +++  M    I P  I+ ++L+  + S+G LS A  ++ +M+ + + P V+  +++
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSM 581

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR-- 587
           I G  +  N S G    + M   G  PD   YN L+   +KE N+  A  L  ++ ++  
Sbjct: 582 IKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQG 641

Query: 588 GLEPDIITYNTIICGYCSLN 607
           GL PD+ TYN+I+ G+C  N
Sbjct: 642 GLVPDVFTYNSILHGFCREN 661



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 217/422 (51%), Gaps = 17/422 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR---LMSCLVDSNSVGQYYKLCR 171
           Y+ +I    + GK + + E+FA M   G  LSPD       LM      ++V +   +  
Sbjct: 298 YNTVINGLCKHGKYERAKEVFAEMLRSG--LSPDSTTYRSLLMEACKKGDAV-ETENIFS 354

Query: 172 AMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            MR +        +  +M+   R G ++ A      V + G +P+ V    +++  C  G
Sbjct: 355 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 414

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            I  A +L + +L  G   +VVT++T+++  CK   L +A +L+N M E  L PD    +
Sbjct: 415 MISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLT 474

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ILIDG  K G L+   EL     ++ +KLDVV +++++D +  +GD+  A + +  M++ 
Sbjct: 475 ILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 534

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
             LP  IS+SIL+  LC +G L EA  ++ +++ + ++P+++  +S+I G+C+SG   DG
Sbjct: 535 EILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDG 594

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-------ALRFFFQSVRMTLIPNLFIFNTLM 460
               + MI  G  PD +  + LI G + +        L    +  +  L+P++F +N+++
Sbjct: 595 EIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSIL 654

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
            G CR  +  +   +   M    + PD  T+T LI G  SQ +L+ A     +ML+RG +
Sbjct: 655 HGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFS 714

Query: 521 PD 522
           PD
Sbjct: 715 PD 716


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 231/426 (54%), Gaps = 6/426 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++ L +KG +  +  +  +V++RG   N  TCN  ++ LC +G++  A +L + +    
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY- 275

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVT++TL+   CK++K+++A Q    MM    +PD   Y+ +IDG  K+G L+E  
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           ELL  A+ +G   D V + S+++     GD+ RA++ ++        P+++ Y+ L+KGL
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+QG ++ A  +  +++     P + TY+ +I+G CK G + D   + ++ I +G  PD 
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              + LI+G      +  AL+   +     + P++  +N++++G C+  +A +  + F  
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEE 515

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M +   +P+ IT+ +LI        L  A  +  +M + GL PD ++++ +IHG  +  +
Sbjct: 516 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGD 575

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F+ ++  G +     +N+L+     + N+  A K+FG++  +G +PD+ TY  
Sbjct: 576 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRI 635

Query: 599 IICGYC 604
           ++ G C
Sbjct: 636 LVDGLC 641



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 253/519 (48%), Gaps = 19/519 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL---VQRLMS-CLVDSNSVGQYYKLC 170
           Y+ +++  V     D++ +++  M   G+  +PD      RL S CL     V    +L 
Sbjct: 109 YNAIMDALVNAAYHDQAHKVYVRMLAAGV--APDARTHTVRLKSFCLTGRPHVA--LRLL 164

Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           R++  +G       Y  ++ GL   G   NA H+  +++ R   P++ T N +L  LC  
Sbjct: 165 RSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQK 224

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  + +L   +L  G   N  T +  I   C++ +LE+A  L   M    + PD++ Y
Sbjct: 225 GDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTY 283

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + L+ GL K  +++E  + L   +++G   D   +++++D Y   G +  A +     + 
Sbjct: 284 NTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVF 343

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            GF+P+ ++Y  LI GLC +G +  A  LF +   + L+P L+ Y+SL+ G C+ G +  
Sbjct: 344 KGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILH 403

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              + + M++ G  PD    +++INGL     + DA      ++    +P++F FNTL+D
Sbjct: 404 ALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLID 463

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+  +    ++L   M  Y I PDVIT+  ++ G+   G        F +M+ +G  P
Sbjct: 464 GYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRP 523

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           + ITY+ +I    K   +     +   M ++G+ PD   +N L++   +  +LD A  LF
Sbjct: 524 NAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLF 583

Query: 582 GQLTDRGLEPDIITYNTIICGYCS-LNSCLIDGYFKSQI 619
            +L ++G      T+N +I  Y S LN  + +  F   I
Sbjct: 584 QKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 622



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 234/493 (47%), Gaps = 39/493 (7%)

Query: 107 SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           S   F C+    I      G+++E+V   A +  MG Y++PD+V                
Sbjct: 243 SANKFTCN--IWIRGLCEDGRLEEAV---ALVERMGAYVAPDVV---------------- 281

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
                         Y  LM GL +   ++ A     +++ +G +P+  T N I+   C +
Sbjct: 282 -------------TYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKS 328

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A+ L    +  G  P+ VT+ +LIN  C E  +E+A +L+N     DL PDL++Y
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVY 388

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + L+ GL + G +    +++   ++ G   D+  ++ +++    +G++  A    +  + 
Sbjct: 389 NSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIV 448

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G+LP+V +++ LI G C++ +L  A  L  ++    + P ++TY+S+++G CK+GK ++
Sbjct: 449 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKE 508

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
               ++ MI +G +P+A+  ++LI        + +A     +  +  L+P+   FNTL+ 
Sbjct: 509 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIH 568

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G CR         LF  +          T  +LI   +S+ ++  A  +F +M+ +G  P
Sbjct: 569 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 628

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D+ TY  ++ GL K  N+         M   G  P +A +  +LN+L     +  A+ + 
Sbjct: 629 DLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAII 688

Query: 582 GQLTDRGLEPDII 594
             +   G+ P+++
Sbjct: 689 HIMVRMGVVPEVV 701



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 190/386 (49%), Gaps = 12/386 (3%)

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++  A   F+ + L    P    ++ +++A    A  ++A ++Y  M+   + PD   +
Sbjct: 85  GRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTH 144

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++ +      GR      LL +  +RG       + +V+      G    A   +D ML 
Sbjct: 145 TVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLG 204

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               P+V +++ ++  LCQ+G ++E+  L  +VL R +  +  T +  I G C+ G+L +
Sbjct: 205 RDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEE 264

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMD 461
             +L + M    + PD V  + L+ GL  D     A ++  + +    IP+ F +NT++D
Sbjct: 265 AVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIID 323

Query: 462 GCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           G C+   L+ AT+ +K  +  G     PD +T+  LI G+ ++G +  A+ LF +   + 
Sbjct: 324 GYCKSGMLQEATELLKDAVFKGFV---PDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           L PD++ Y++++ GL +   I   L +   M   G  PDI  YN+++N L K  N+  A 
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYC 604
            +      +G  PD+ T+NT+I GYC
Sbjct: 441 VVMNDAIVKGYLPDVFTFNTLIDGYC 466



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/186 (18%), Positives = 70/186 (37%), Gaps = 2/186 (1%)

Query: 436 DALRFFFQSVRMTLIPNLF--IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           D +     S R  L P+    ++   +    R  R    V  F  M ++   P    +  
Sbjct: 52  DDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNA 111

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           ++  + +      A  ++ +ML  G+ PD  T++  +          V L + + +   G
Sbjct: 112 IMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERG 171

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
                A Y  ++  L    +   A  LF ++  R + PD+ T+N ++   C     +  G
Sbjct: 172 CDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESG 231

Query: 614 YFKSQI 619
              +++
Sbjct: 232 ALLAKV 237


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 283/574 (49%), Gaps = 30/574 (5%)

Query: 45  TNNPTPAIQFFK----WT--HNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTY 98
           ++ P  A++ FK    W   H    +P I    ++L+    R    H  +  +  FG   
Sbjct: 94  SDGPALAVELFKRMDRWACPHAAADAPTIYTY-NILIDCYRR---MHRPELALAVFG--- 146

Query: 99  NFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSC 156
              RL R  LG   C Y+ LI+ + + G++D++ E+F  M +  +  SPD+V    L+  
Sbjct: 147 ---RLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSV--SPDVVTYNSLIDG 201

Query: 157 LVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           L  +  + +  ++   M   G       Y  L+ G    G+ + +  + +++   G +P 
Sbjct: 202 LCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPC 261

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +V CN  +  LC + +I  A  +FD ++L GPKPN++++STL++ +  E        L N
Sbjct: 262 VVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVN 321

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
           LM+   +VP+   ++ILI+   + G + +   +     ++G+  D V F++V+ +   IG
Sbjct: 322 LMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 381

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY- 391
            +  A+  ++ M++ G  P+   Y  LI+G C  G LV+A  L  +++ + + P  + Y 
Sbjct: 382 RLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 441

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
           SS+I+   K G++ +G  + D M++ G +P+ V  + L+ G      M +A         
Sbjct: 442 SSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 501

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
           + + PN +I+ TL+DG C+  R  D + +F  M    +KP  + + +++ G+      ++
Sbjct: 502 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTA 561

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +F +M++ G T  + TY  ++ GL +         + + +    V  DI  +N++++
Sbjct: 562 AKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 621

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            ++K      A +LF  ++  GL P + TYN +I
Sbjct: 622 AMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMI 655



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 202/379 (53%), Gaps = 6/379 (1%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A ++F  LL  G  P+V +++TLI+ F KE +++KA++L+  M+E  + PD++ Y+ LID
Sbjct: 141 ALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLID 200

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL K   + +   +L   +D G++ +   ++S++  Y   G    +V+ +  M + G +P
Sbjct: 201 GLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIP 260

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
            V++ +  I  LC+  R+ EA  +F  ++++  +P++++YS+L+ G+   G   +  SL 
Sbjct: 261 CVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLV 320

Query: 412 DNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + M+ +G+ P+    ++LIN     G+M  A+  F       +IP+   F T++   CR+
Sbjct: 321 NLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 380

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  D +  F  M    + P    +  LI+G  + G L  A  L  +M+ + + P  + Y
Sbjct: 381 GRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 440

Query: 527 -SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            S+II+ LFK   ++ G  +  LM + G  P++  +N L+       N++ A  L   + 
Sbjct: 441 FSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 500

Query: 586 DRGLEPDIITYNTIICGYC 604
             G+EP+   Y T++ GYC
Sbjct: 501 SIGIEPNCYIYGTLVDGYC 519



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 235/487 (48%), Gaps = 38/487 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  Y   G   ESV +F  MS  G          L+ C+V+ NS    + LCR  R
Sbjct: 230 YNSLIYGYSTAGMWKESVRVFKEMSSSG----------LIPCVVNCNSF--IHALCRHNR 277

Query: 175 GK----------------GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
            K                    Y  L++G   +G   N   +   ++ +G VPN    N 
Sbjct: 278 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNI 337

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++      G +  A  +F+ +   G  P+ VTF+T+I++ C+  +L+ A   +N M+++ 
Sbjct: 338 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 397

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD-VVVFSSVMDAYVGIGDVGRA 337
           + P   +Y  LI G    G L +  EL+   +++ +    V  FSS+++     G V   
Sbjct: 398 VPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEG 457

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
               D M+  G  PNV++++ L++G C  G + EA  L   +    +EP+   Y +L+DG
Sbjct: 458 KDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 517

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPN 452
           +CK+G++ D  +++ +M+ +G+KP +V+ +++++GL        A + F + +      +
Sbjct: 518 YCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVS 577

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFM--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           +  +  ++ G CR    TD   + +  L  M N+K D+IT  ++I  +   G    A  L
Sbjct: 578 IQTYGVVLGGLCR-NNCTDEANMLLEKLFAM-NVKFDIITFNIVISAMLKVGRRQEAKEL 635

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F  +   GL P V TY+ +I  L K ++     ++F  +E++G APD  + N ++ ML+K
Sbjct: 636 FAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLK 695

Query: 571 ECNLDAA 577
           +  +  A
Sbjct: 696 KAEVAKA 702



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 152/293 (51%), Gaps = 5/293 (1%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           +  ++ ++D Y  +     A+  + R+L  G  P+V SY+ LI G  ++G + +A  LF 
Sbjct: 122 IYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFY 181

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NG 432
           +++ + + P ++TY+SLIDG CK+ ++     + + M+  G++P+    + LI      G
Sbjct: 182 KMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAG 241

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
           +  +++R F +     LIP +   N+ +   CR  R  +   +F  M +   KP++I+++
Sbjct: 242 MWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYS 301

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            L+ G A++G  ++   L   M+ +G+ P+   ++ +I+   +   +   + +F+ M+  
Sbjct: 302 TLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNK 361

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           G+ PD   +  +++ L +   LD AL  F  + D G+ P    Y  +I G C+
Sbjct: 362 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCN 414



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 131/304 (43%), Gaps = 12/304 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLVDSNSVGQYYKLC 170
           +S +I N  + G++ E  +I   M   G    P++V    LM   CLV   ++ + + L 
Sbjct: 441 FSSIINNLFKEGRVAEGKDIMDLMVQTG--QRPNVVTFNSLMEGYCLV--GNMEEAFALL 496

Query: 171 RAMRGKGF---C-VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            AM   G    C +Y  L++G  + G I++A  + R ++ +G  P  V  N IL  L   
Sbjct: 497 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQA 556

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            +   A  +F  ++  G   ++ T+  ++   C+    ++A  L   +  M++  D+I +
Sbjct: 557 RRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITF 616

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +I+I  + K GR +E  EL       GL   V  ++ ++   +       A   +  +  
Sbjct: 617 NIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEK 676

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P+    + +++ L ++  + +A      +    L     T S L   F + GK R+
Sbjct: 677 SGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCRE 736

Query: 407 GFSL 410
              L
Sbjct: 737 HIKL 740



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 6/70 (8%)

Query: 540 SVGLHMFKLMERNGV------APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           ++ + +FK M+R         AP I  YN+L++   +    + AL +FG+L   GL PD+
Sbjct: 98  ALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDV 157

Query: 594 ITYNTIICGY 603
            +YNT+I G+
Sbjct: 158 CSYNTLIDGF 167


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 168/644 (26%), Positives = 283/644 (43%), Gaps = 91/644 (14%)

Query: 51  AIQFFKW-----THNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG--KTYNFFRL 103
           A  FFK+     +   V S  +A   HVL   +++ +A  V   ++ + G  ++      
Sbjct: 10  AFGFFKFAFQDDSDEMVKSSCVAA--HVLGAQNLKFLAQDVVSWVIRRVGVDRSREVVEF 67

Query: 104 FRDSLGDFGCDYSFL---IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
                 +F  D+S L   +  ++++    E++EI   M ++G+  S   +  L   L+  
Sbjct: 68  MWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRI 127

Query: 161 NSVGQYYKLCRAMRGKG--------------FC-------------------------VY 181
              G  +KL R M  +G              FC                          Y
Sbjct: 128 GDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAY 187

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             L+N    +G   +A    R +I  G  P++VT   ++   C  G +  A +LFD +  
Sbjct: 188 NILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKE 247

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR--- 298
            G  PNVV ++TL+N + K   + +A  LY  M    + PD   ++IL+ G ++ GR   
Sbjct: 248 AGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREED 307

Query: 299 --------------------------------LKEGNELLLTALDRGLKLDVVVFSSVMD 326
                                           L E  + L   L++G+   VV F+S++ 
Sbjct: 308 RDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIA 367

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           AY   G   +A + Y  M+  G  P+ ++ S LI GL +  RL EA  L  ++++  L  
Sbjct: 368 AYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPI 427

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           +   ++ L+DG+ + G +   +SL++ M  RG+ PDAV  S  INGL     + +A   F
Sbjct: 428 NKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVF 487

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            Q  +   +PN F++N+L+ G C   R  + + L   M    + PD+ T  ++I G+  +
Sbjct: 488 LQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKE 547

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G + SA  +F  M   GL PD++TY+ +I G  K  +      +   M   G  PDI  Y
Sbjct: 548 GRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTY 607

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           N+ L+ L     +  A+ +  +L   G+ PD +TYNT++ G C+
Sbjct: 608 NIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCT 651



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 235/491 (47%), Gaps = 16/491 (3%)

Query: 95  GKTYNFFRLFRDSLGDFGCDYSFL-----IENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G+T++     R  + D GC  S +     I  +   G + E+  +F  M + G   +   
Sbjct: 198 GQTFDALGWMRFMI-DNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVC 256

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVI 205
              LM+  V +  +GQ   L   M+ K        +  L+ G  R G  E+   + R + 
Sbjct: 257 YNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLS 316

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           Q G +      N  +  LC  G +  A    + +L  G  P VV F+++I A+ +    E
Sbjct: 317 QSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEE 376

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           KA++ Y +M++  L P  +  S LI GL K  RL+E  +LL   +  GL ++   F+ ++
Sbjct: 377 KAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLL 436

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           D Y  +GDV  A   ++ M   G  P+ +++S  I GL   G + EA  +F Q+  +   
Sbjct: 437 DGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFM 496

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P+   Y+SLI GFC SG+L++   L   M ++GL PD    +++INGL     M  A   
Sbjct: 497 PNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDV 556

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F       LIP++  +NTL+DG C+      T ++   M      PD+ T+ + + G+ +
Sbjct: 557 FRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCT 616

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
              +S A+++  +++  G+ PD +TY+ +++G+         +   KL+ +    P++  
Sbjct: 617 GRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTDVLERAMIVTAKLL-KMAFVPNVVT 675

Query: 561 YNVLLNMLIKE 571
            N+LL+   K+
Sbjct: 676 ANLLLSHFCKQ 686



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 141/274 (51%), Gaps = 14/274 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS----VGQYYKLC 170
           ++ L++ Y R+G +  +  ++  M   GI+  PD V    S  ++  S    V + Y + 
Sbjct: 432 FTLLLDGYFRMGDVAGAYSLWNEMEGRGIH--PDAVA--FSAFINGLSIVGLVDEAYDVF 487

Query: 171 RAMRGKGFCVYEFLMNGLLR----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M  KGF    F+ N L+R     G ++ A  + R++ ++G +P+I T N I+  LC  
Sbjct: 488 LQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKE 547

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++ +AS +F  +   G  P++VT++TLI+ +CK        ++ N M      PD+  Y
Sbjct: 548 GRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTY 607

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +I + GL    ++     +L   +  G+  D V +++VM+  V    + RA+    ++L 
Sbjct: 608 NIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNG-VCTDVLERAMIVTAKLLK 666

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
             F+PNV++ ++L+   C+QG + E   ++GQ L
Sbjct: 667 MAFVPNVVTANLLLSHFCKQG-MPEKTIMWGQKL 699



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 152/318 (47%), Gaps = 17/318 (5%)

Query: 89  KMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           +M+++FG       LF  SL    C  S LI    ++ ++ E+ ++   M   G+ ++  
Sbjct: 383 RMMVKFG-------LFPSSLT---C--SSLIMGLSKLWRLQEARDLLYEMIVEGLPINKA 430

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
               L+        V   Y L   M G+G       +   +NGL   G+++ A+ +  Q+
Sbjct: 431 AFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQM 490

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
            ++GF+PN    N +++  C +G++  A  L   +   G  P++ T + +IN  CKE ++
Sbjct: 491 SKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRM 550

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           + A  ++  M    L+PD++ Y+ LIDG  KA      +E++      G   D+  ++  
Sbjct: 551 KSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIR 610

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +        + RAV   + +++ G +P+ ++Y+ ++ G+C    L  A  +  ++L    
Sbjct: 611 LHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAF 669

Query: 385 EPSLLTYSSLIDGFCKSG 402
            P+++T + L+  FCK G
Sbjct: 670 VPNVVTANLLLSHFCKQG 687


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 277/570 (48%), Gaps = 18/570 (3%)

Query: 53  QFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG----KTYNFFRLFRDSL 108
            F  + H  +S   ++ +IH+L++S     A     +M+ + G    +  N       + 
Sbjct: 105 HFPNFKHTSLS---LSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNC 161

Query: 109 GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV----G 164
           G     +  LI  YV+  K+ E+ E F  +   G  +S D    L+  LV    V    G
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221

Query: 165 QYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
            Y ++ R+  G        ++N L + G +E       QV ++G  P+IVT N ++    
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G +  A  L + +   G  P V T++T+IN  CK  K E+A +++  M+   L PD  
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y  L+    K G + E  ++      R +  D+V FSS+M  +   G++ +A+  ++ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
              G +P+ + Y+ILI+G C++G +  A  L  ++L +     ++TY++++ G CK   L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
            +   L++ M +R L PD+   ++LI+G      + +A+  F +     +  ++  +NTL
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG  ++       +++  M    I P  I++++L+  + S+G L+ A  ++ +M+ + +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P V+  +++I G  +  N S G    + M   G  PD   YN L+   ++E N+  A  
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641

Query: 580 LFGQLTDR--GLEPDIITYNTIICGYCSLN 607
           L  ++ +   GL PD+ TYN+I+ G+C  N
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 239/480 (49%), Gaps = 15/480 (3%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC---- 179
           GK+++     + + + G+Y  PD+V    L+S       + + ++L  AM GKGF     
Sbjct: 249 GKMEKVGTFLSQVQEKGVY--PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NGL + G  E A  +  ++++ G  P+  T   +L   C  G +     +F  +
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P++V FS++++ F +   L+KA   +N + E  L+PD +IY+ILI G  + G +
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L    L +G  +DVV +++++        +G A + ++ M      P+  + +IL
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+ G L  A  LF ++  +R+   ++TY++L+DGF K G +     ++ +M+ + +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P  +  S+L+N L     + +A R + + +   + P + I N+++ G CR   A+D   
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR--GLTPDVITYSAIIHG 532
               M      PD I++  LI G   + ++S A  L  +M +   GL PDV TY++I+HG
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
             +   +     + + M   GV PD + Y  ++N  + + NL  A ++  ++  RG  PD
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 219/421 (52%), Gaps = 15/421 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I    + GK + + E+FA M   G  LSPD    + L+        V +  K+   
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSG--LSPDSTTYRSLLMEACKKGDVVETEKVFSD 365

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR +        +  +M+   R G ++ A      V + G +P+ V    +++  C  G 
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A +L + +L  G   +VVT++T+++  CK   L +A +L+N M E  L PD    +I
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDG  K G L+   EL     ++ ++LDVV +++++D +  +GD+  A + +  M++  
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP  ISYSIL+  LC +G L EA  ++ +++ + ++P+++  +S+I G+C+SG   DG 
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD-------ALRFFFQSVRMTLIPNLFIFNTLMD 461
           S  + MI  G  PD +  + LI G + +        L    +  +  L+P++F +N+++ 
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G CR  +  +   +   M    + PD  T+T +I G  SQ +L+ A  +  +ML+RG +P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725

Query: 522 D 522
           D
Sbjct: 726 D 726


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 244/480 (50%), Gaps = 38/480 (7%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAM 173
           + L+  + ++G I  S  +FA +   G +  PD V    L+  L     V +       +
Sbjct: 97  NLLMNCFSQLGHIKFSFSVFAKILKKGYH--PDAVTFTILIKGLCLKGEVHKALYFHDKV 154

Query: 174 RGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +GF +    Y  L+NGL R G  + A  + R+V  +   PN+V  + I+  +C +  +
Sbjct: 155 VAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLV 214

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A  L+  ++     P+VVT+S+LI+ FC   KL+ A  L+N M+  ++ P++  +SIL
Sbjct: 215 NDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSIL 274

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDG  K G+++E   +L   + + +KLDVV ++S+MD Y  +  V +A   ++ M   G 
Sbjct: 275 IDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGV 334

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V SYSI+I G C+   + EA  LF ++  +++ P+++TY+SL+DG CKSG+      
Sbjct: 335 TPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALE 394

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           L D M  RG +P                              N+  +N+++D  C+    
Sbjct: 395 LVDEMHDRG-QPS-----------------------------NIITYNSILDAICKNNHV 424

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              + L   +    I+PD+ T+TVLI G+   G L  A  +F  +L +G +P++ TY+++
Sbjct: 425 DKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSL 484

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I+G         GL M   M+ NG  P+   Y +L++ L ++   D A KL  ++  RGL
Sbjct: 485 INGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 230/427 (53%), Gaps = 5/427 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++  LL+    + A  + +Q+   G  P+ +TCN ++      G I  + S+F  +L  G
Sbjct: 64  ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+ VTF+ LI   C + ++ KA   ++ ++      D + Y  LI+GL + G  K   
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAV 183

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +LL     + ++ +VV++S+++D+      V  A   Y  M++    P+V++YS LI G 
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C  G+L  A  LF +++   + P++ T+S LIDGFCK GK+R+  ++   M+K+ +K D 
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  + L++G      +  A   F    +  + P+++ ++ +++G C++K   + +KLF  
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    I P+V+T+  L+ G+   G  S A+ L  +M  RG   ++ITY++I+  + K  +
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNH 423

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   + +   ++  G+ PDI  Y VL+N L K   LD A K+F  L  +G  P+I TY +
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS 483

Query: 599 IICGYCS 605
           +I G+C+
Sbjct: 484 LINGFCN 490



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 235/428 (54%), Gaps = 5/428 (1%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           F     LMN   + G I+ +F +  +++++G+ P+ VT   ++K LC+ G++  A    D
Sbjct: 93  FITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHD 152

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            ++  G + + V++ TLIN  C+  + + A QL   +    + P++++YS +ID + K  
Sbjct: 153 KVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDK 212

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            + +  +L    + + +  DVV +SS++  +  +G +  AV  ++RM++    PNV ++S
Sbjct: 213 LVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFS 272

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           ILI G C++G++ EA  +   ++ + ++  ++TY+SL+DG+C   ++    SL++ M +R
Sbjct: 273 ILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQR 332

Query: 418 GLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G+ PD    S++ING     ++ +A++ F +     + PN+  +N+L+DG C+  R +  
Sbjct: 333 GVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCA 392

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           ++L   M       ++IT+  ++  I     +  AI+L  ++ ++G+ PD+ TY+ +I+G
Sbjct: 393 LELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLING 452

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K   +     +F+ +   G +P+I  Y  L+N    +   D  L +  ++ D G  P+
Sbjct: 453 LCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512

Query: 593 IITYNTII 600
            ITY  +I
Sbjct: 513 AITYEILI 520



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 190/369 (51%), Gaps = 5/369 (1%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P P  + F  ++ +  K  + + A  L   M    + PD I  ++L++   + G +K   
Sbjct: 54  PIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSF 113

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +    L +G   D V F+ ++      G+V +A+  +D+++  GF  + +SY  LI GL
Sbjct: 114 SVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGL 173

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+ G    A  L  +V  + + P+++ YS++ID  CK   + D F LY  M+ + + PD 
Sbjct: 174 CRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDV 233

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  S LI+G      +  A+  F + +   + PN++ F+ L+DG C+  +  +   +  +
Sbjct: 234 VTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAV 293

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M   N+K DV+T+  L+ G      ++ A  LF  M +RG+TPDV +YS +I+G  K K 
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKM 353

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   + +F+ M    + P++  YN L++ L K      AL+L  ++ DRG   +IITYN+
Sbjct: 354 VDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS 413

Query: 599 IICGYCSLN 607
           I+   C  N
Sbjct: 414 ILDAICKNN 422



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 186/342 (54%), Gaps = 6/342 (1%)

Query: 270 LYN-LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           L+N L+ + + +P  I +  ++  L KA + +    L       G+K D +  + +M+ +
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             +G +  +   + ++L  G+ P+ ++++ILIKGLC +G + +A     +V+ +  +   
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQ 443
           ++Y +LI+G C+ G+ +    L   +  + ++P+ V+ S +I+      L+ DA   + +
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            V   + P++  +++L+ G C + +    V LF  M   NI P+V T ++LI G   +G 
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A  +   M+K+ +  DV+TY++++ G    K ++    +F +M + GV PD+  Y++
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           ++N   K   +D A+KLF ++  + + P+++TYN+++ G C 
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCK 385



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 143/291 (49%), Gaps = 8/291 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS--CL 157
           F R+  D++      +S LI+ + + GK+ E+  + A M    + L       LM   CL
Sbjct: 256 FNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCL 315

Query: 158 VDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
           V    V +   L   M  +G       Y  ++NG  +  +++ A  +  ++  +   PN+
Sbjct: 316 V--KQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNV 373

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           VT N ++  LC +G+   A  L D +   G   N++T++++++A CK   ++KA  L   
Sbjct: 374 VTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTK 433

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           + E  + PD+  Y++LI+GL K GRL +  ++    L +G   ++  ++S+++ +   G 
Sbjct: 434 IKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGF 493

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
               +    +M + G +PN I+Y ILI  L ++    +A  L  +++ R L
Sbjct: 494 FDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 138/309 (44%), Gaps = 4/309 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  +  +GK+  +V++F  M    I  +      L+        V +   +   M 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K        Y  LM+G      +  A  +   + QRG  P++ + + ++   C    + 
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF+ +      PNVVT+++L++  CK  +   A +L + M +     ++I Y+ ++
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D + K   + +   LL    ++G++ D+  ++ +++    +G +  A + ++ +L  G+ 
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN+ +Y+ LI G C +G   E   +  ++      P+ +TY  LI    +  +      L
Sbjct: 476 PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKL 535

Query: 411 YDNMIKRGL 419
              MI RGL
Sbjct: 536 LREMIARGL 544


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 217/403 (53%), Gaps = 32/403 (7%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +++RGF  N+   N +LK LC N + G A SL   +      P+VV+++T+I  FC+  +
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           LEKA QL N M        L+ + ILID   KAG++ E   LL     +GL+ D++V++S
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++  +   G++ R    +D +L  G  P  I+Y+ LI+G C+ GRL EA  +F  ++ R 
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQ 443
           + P++ TY+ LIDG C  GK ++   L + M+++  +P+ V  +++IN L  D+L     
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSL----- 367

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                                      D +++  LM     +PD IT+  L+ G+ ++G 
Sbjct: 368 -------------------------VADALEIVELMKKRRTRPDNITYNSLLGGLCAKGD 402

Query: 504 LSSAILLFFQMLKRG--LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           L  A  L + MLK      PDVI+++A+IHGL KG  +   L ++ L+     A DI   
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTT 462

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N+LLN  +K  +++ A++L+ Q+++  + P+  TY T+I G+C
Sbjct: 463 NILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFC 505



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 144/588 (24%), Positives = 287/588 (48%), Gaps = 36/588 (6%)

Query: 35  ANAILANLIKTNNPTPAIQFFK---WTHNCVSSPNIAQLIHVLLQSDMRDVA-SHVFDKM 90
            N ++A L+++ N   A  F++    T   ++  +++ L+   +Q  MR    +H    +
Sbjct: 75  GNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQ--MRKTGFAHGVLAL 132

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           +++ G  +N +            +Y+ L++   R  +  ++V +   M      L PD+V
Sbjct: 133 MLKRGFAFNVY------------NYNILLKGLCRNLEFGKAVSLLREMRQNS--LMPDVV 178

Query: 151 Q--RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL-----RKGVIENAFHMHRQ 203
               ++    +   + +  +L   M+G G C +  +  G+L     + G ++ A  + ++
Sbjct: 179 SYNTVIRGFCEGKELEKALQLANEMQGSG-CSWSLVTWGILIDAFCKAGKMDEAMGLLKE 237

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +  +G   +++    +++  C  G++    +LFD +L  G  P  +T++TLI  FCK  +
Sbjct: 238 MKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGR 297

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L++A +++  MME  + P++  Y+ LIDGL   G+ KE  +LL   L +  + +VV ++ 
Sbjct: 298 LKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNI 357

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           +++       V  A++  + M      P+ I+Y+ L+ GLC +G L EA  L   +L   
Sbjct: 358 IINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDS 417

Query: 384 --LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGD 436
              +P ++++++LI G CK  +L     +YD ++++    D V  ++L+N     G +  
Sbjct: 418 SYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNK 477

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A+  + Q     ++PN   + T++DG C+         L   M +  + P V  +  L+ 
Sbjct: 478 AMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLS 537

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
            +  +G+L  A  LF +M +    PDVI+++ +I G  K  +I     +   M   G++P
Sbjct: 538 SLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSP 597

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           D+  Y+ L+N  +K   LD A+  F ++ D G EPD    ++++  YC
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVL-KYC 644



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 195/399 (48%), Gaps = 14/399 (3%)

Query: 220 LKRLC--INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           L+ LC   N Q+ NA S+F   +  G   +    + L+    +    E AF  Y  M+E 
Sbjct: 43  LRSLCEDSNPQLKNAVSVFQQAVDSGGSLSFAG-NNLMATLVRSRNHEVAFSFYRKMLET 101

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           D   + +  S L++   +  +    + +L   L RG   +V  ++ ++       + G+A
Sbjct: 102 DTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKA 161

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           V     M     +P+V+SY+ +I+G C+   L +A  L  ++       SL+T+  LID 
Sbjct: 162 VSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDA 221

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-------MGDALRFFFQSVRMTLI 450
           FCK+GK+ +   L   M  +GL+ D +V + LI G         G AL  F + +     
Sbjct: 222 FCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKAL--FDEVLERGDS 279

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P    +NTL+ G C+L R  +  ++F  M    ++P+V T+T LI G+   G    A+ L
Sbjct: 280 PCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
              ML++   P+V+TY+ II+ L K   ++  L + +LM++    PD   YN LL  L  
Sbjct: 340 LNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCA 399

Query: 571 ECNLDAALKL-FGQLTDRG-LEPDIITYNTIICGYCSLN 607
           + +LD A KL +  L D    +PD+I++N +I G C  N
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGN 438


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 229/479 (47%), Gaps = 34/479 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI  + ++G    S  +FA +   G   +   +  L+  L     + Q       + 
Sbjct: 94  FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVV 153

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF +    Y  L+NGL + G    A  + R+V  +   PN+V  N I+  +C    + 
Sbjct: 154 ALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 213

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L+  ++  G  P+VVT+S LI+ FC   KL  A  L+N M+  ++ PD+  +SIL+
Sbjct: 214 EAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILV 273

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  K GR+KE   +L   + +G+K DVV + S+MD Y  +  V +A   ++ M  GG  
Sbjct: 274 DGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVT 333

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            NV SY+I+I G C+  ++ EA  LF ++  + + P ++TY+SLIDG CKSGK+     L
Sbjct: 334 ANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKL 393

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            D M  RG+  D +                               +N+++D  C+  +  
Sbjct: 394 VDEMHDRGVPHDKIT------------------------------YNSILDALCKNHQVD 423

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + L   M    I+PD+ T+T+LI G+   G L  A  +F  +L +G    V TY+ +I
Sbjct: 424 KAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMI 483

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            G          L +   ME NG  P+   Y +++  L ++   D A KL  ++  RGL
Sbjct: 484 QGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 232/432 (53%), Gaps = 7/432 (1%)

Query: 180 VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           ++EF  ++  L++    + A  +HR++   G   ++VT N ++      G    + S+F 
Sbjct: 56  IFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFA 115

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L  G +PN +T +TLI   C + ++ +A   ++ ++ +    + + Y  LI+GL K G
Sbjct: 116 NILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVG 175

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           +     +LL     + ++ +VV++++++D+   +  V  A   Y  M++ G  P+V++YS
Sbjct: 176 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYS 235

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G C  G+L +A GLF +++   + P + T+S L+DGFCK G++++  ++   M+K+
Sbjct: 236 ALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQ 295

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G+KPD V    L++G      +  A   F    +  +  N+  +N +++G C++K+  + 
Sbjct: 296 GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEA 355

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           + LF  M   NI PDV+T+  LI G+   G +S A+ L  +M  RG+  D ITY++I+  
Sbjct: 356 MNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDA 415

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K   +   + +   M+  G+ PD+  Y +L++ L K   L  A  +F  L  +G    
Sbjct: 416 LCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNIT 475

Query: 593 IITYNTIICGYC 604
           + TY  +I G+C
Sbjct: 476 VYTYTVMIQGFC 487



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 245/496 (49%), Gaps = 22/496 (4%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           D   L+ ++ RI  I+ +  IF +              +++  LV  N       L R M
Sbjct: 36  DEHSLVSSFNRILNINPTPPIFEF-------------GKILGSLVKINCYQTAISLHREM 82

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G       +  L+N   + G    +F +   ++++G+ PN +T   ++K LC+ GQI
Sbjct: 83  EFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQI 142

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A    D ++ +G   N V + TLIN  CK  +   A QL   +    + P++++Y+ +
Sbjct: 143 HQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTI 202

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ID + K   + E  +L    + +G+  DVV +S+++  +  +G +  A+  +++M++   
Sbjct: 203 IDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEI 262

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V ++SIL+ G C++GR+ EA  +   ++ + ++P ++TY SL+DG+C   ++    S
Sbjct: 263 NPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKS 322

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           +++ M + G+  +    +++ING      + +A+  F +     +IP++  +N+L+DG C
Sbjct: 323 IFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLC 382

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  + +  +KL   M    +  D IT+  ++  +     +  AI L  +M   G+ PD+ 
Sbjct: 383 KSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMY 442

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+ +I GL KG  +    ++F+ +   G    +  Y V++         D AL L  ++
Sbjct: 443 TYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKM 502

Query: 585 TDRGLEPDIITYNTII 600
            D G  P+  TY  II
Sbjct: 503 EDNGCIPNAKTYEIII 518



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 197/376 (52%), Gaps = 5/376 (1%)

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           S F+ +L + P P +  F  ++ +  K    + A  L+  M    +  DL+ ++ILI+  
Sbjct: 42  SSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCF 101

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G       +    L +G + + +  ++++      G + +A+  +D+++  GF  N 
Sbjct: 102 SQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNK 161

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           + Y  LI GLC+ G+   A  L  +V  + ++P+++ Y+++ID  CK   + + F LY  
Sbjct: 162 VCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 221

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M+ +G+ PD V  S LI+G      + DA+  F + +   + P+++ F+ L+DG C+  R
Sbjct: 222 MVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGR 281

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   +  +M    IKPDV+T+  L+ G      ++ A  +F  M + G+T +V +Y+ 
Sbjct: 282 VKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNI 341

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+G  K K +   +++FK M    + PD+  YN L++ L K   +  ALKL  ++ DRG
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401

Query: 589 LEPDIITYNTIICGYC 604
           +  D ITYN+I+   C
Sbjct: 402 VPHDKITYNSILDALC 417



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 197/400 (49%), Gaps = 5/400 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P I    KIL  L        A SL   +   G   ++VTF+ LIN F +      +F 
Sbjct: 53  TPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFS 112

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           ++  +++    P+ I  + LI GL   G++ +        +  G  L+ V + ++++   
Sbjct: 113 VFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLC 172

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            +G    A+Q   R+      PNV+ Y+ +I  +C+   + EA  L+ +++ + + P ++
Sbjct: 173 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           TYS+LI GFC  GKL D   L++ MI   + PD    S+L++G      + +A       
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM 292

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           ++  + P++  + +LMDG C +K+      +F  M    +  +V ++ ++I G      +
Sbjct: 293 MKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKV 352

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ LF +M  + + PDV+TY+++I GL K   IS  L +   M   GV  D   YN +
Sbjct: 353 DEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSI 412

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L+ L K   +D A+ L  ++ D G++PD+ TY  +I G C
Sbjct: 413 LDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLC 452



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 171/368 (46%), Gaps = 46/368 (12%)

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD----VVVFSSVMDAYVGIGDVGR 336
           P  II + L   L    +  E +  L+++ +R L ++    +  F  ++ + V I     
Sbjct: 17  PKFIISTSLYSQLHHHHQDDEHS--LVSSFNRILNINPTPPIFEFGKILGSLVKINCYQT 74

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+  +  M   G   ++++++ILI    Q G    +  +F  +L +  EP+ +T ++LI 
Sbjct: 75  AISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIK 134

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           G C  G++      +D ++  G   + V    LINGL        AL+   +     + P
Sbjct: 135 GLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQP 194

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+ ++NT++D  C++K   +   L+  M    I PDV+T++ LI G    G L+ AI LF
Sbjct: 195 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLF 254

Query: 512 FQ-----------------------------------MLKRGLTPDVITYSAIIHGLFKG 536
            +                                   M+K+G+ PDV+TY +++ G    
Sbjct: 255 NKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLV 314

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
           K ++    +F  M + GV  ++  YN+++N   K   +D A+ LF ++  + + PD++TY
Sbjct: 315 KQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTY 374

Query: 597 NTIICGYC 604
           N++I G C
Sbjct: 375 NSLIDGLC 382


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 235/456 (51%), Gaps = 15/456 (3%)

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           RL++ L       Q + L + M   G          L+N L     I         +++R
Sbjct: 96  RLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRR 155

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G++P++VT   ++K LC+  +I  A+ LF  +  +G  PNVVT+ TLI   C    +  A
Sbjct: 156 GYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIA 215

Query: 268 FQLYNLMME------MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            + +  M+        +  P++I YSI+IDGL K G  +E   L    +D+G++ +VV F
Sbjct: 216 LKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTF 275

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           S ++D     G V +A +  + M+  G +PN+ +Y+ LIKG C  G L  A  LF  +  
Sbjct: 276 SVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPS 335

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM----GDA 437
           +  EP +++Y+ LI+G+CK+ K+ +   L++ M+  G+ PD     +L+  L      D 
Sbjct: 336 KGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDD 395

Query: 438 LRFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
            +  F+ ++   +P +L I    +DG C+     + +KLF  +  YN+K D+ T   LI 
Sbjct: 396 AKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLID 455

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+   G L +A  LF ++ + G+ PD + YS++IHG  K   +     +F+ ME NG +P
Sbjct: 456 GLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSP 515

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           D+  Y++L+    +   L+  ++L  ++ ++ + PD
Sbjct: 516 DLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPD 551



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 236/466 (50%), Gaps = 12/466 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           L  C   S SV Q ++    M    F  +  L+ GL +       F +++Q+   G  P+
Sbjct: 67  LHKCKTGSISVTQAHQFFDLMMRSIFS-FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPD 125

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           ++T N ++  LC   +I    +    ++  G  P+VVTF+TLI   C E ++ +A +L+ 
Sbjct: 126 LLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFM 185

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGR----LKEGNELL--LTALDRGLKLDVVVFSSVMD 326
            M ++   P+++ Y  LI GL   G     LK   E+L   +      + +V+ +S ++D
Sbjct: 186 RMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIID 245

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               +G+   A+  ++ M++ G  PNV+++S+LI  LC++G++++A  L   ++   + P
Sbjct: 246 GLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVP 305

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           +L TY+SLI GFC  G L     L+ +M  +G +PD +  ++LING      + +A++ F
Sbjct: 306 NLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLF 365

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + + + + P++     L+       +  D  +LF ++  Y +  D+    + + G+   
Sbjct: 366 NEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKN 425

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +  A+ LF ++    +  D+ T+  +I GL K   +     +F+ +   G+ PD   Y
Sbjct: 426 GYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAY 485

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           + +++   K+  +D A  LF ++ + G  PD+ITY+ ++ G+   N
Sbjct: 486 SSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESN 531



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 232/495 (46%), Gaps = 28/495 (5%)

Query: 59  HNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNF---FRLFRD-SLGDFGCD 114
           H C +        H      MR + S  F++++    K  ++   F L++   L     D
Sbjct: 68  HKCKTGSISVTQAHQFFDLMMRSIFS--FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPD 125

Query: 115 Y---SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKL 169
               + LI     + +I+E +   A +   G Y+ PD+V    L+  L   + + +  KL
Sbjct: 126 LLTLNILINCLCNVNRINEGLAAMAGIMRRG-YI-PDVVTFTTLIKGLCVEHRIIEATKL 183

Query: 170 CRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ--RGFV----PNIVTCNKI 219
              M+  G       Y  L+ GL   G I  A   H++++     +V    PN+++ + I
Sbjct: 184 FMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSII 243

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  LC  G    A  LF+ ++  G +PNVVTFS LI+  CKE ++ KA +L  +M+++ +
Sbjct: 244 IDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGI 303

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           VP+L  Y+ LI G    G L    EL ++   +G + DV+ ++ +++ Y     V  A++
Sbjct: 304 VPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMK 363

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            ++ ML+ G  P+V +  +L+K L   G++ +A  LF  +    +   L      +DG C
Sbjct: 364 LFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLC 423

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLF 454
           K+G + +   L++ +    +K D      LI+GL     +  A   F +     + P+  
Sbjct: 424 KNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAM 483

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +++++ G C+  +      LF  M      PD+IT+++L+RG      L   + L  +M
Sbjct: 484 AYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRM 543

Query: 515 LKRGLTPDVITYSAI 529
           +++ + PD   Y+ +
Sbjct: 544 IEKDVWPDDGIYAIV 558



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 164/376 (43%), Gaps = 47/376 (12%)

Query: 38  ILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQF 94
           I+  L K  N   AI  F    +    PN+     LI +L +      A  + + M+IQ 
Sbjct: 243 IIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLE-MMIQI 301

Query: 95  GKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM 154
           G   N F             Y+ LI+ +  +G ++ + E+F  M   G    PD++    
Sbjct: 302 GIVPNLFT------------YTSLIKGFCLVGDLNSAKELFVSMPSKG--YEPDVIS--- 344

Query: 155 SCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
                                     Y  L+NG  +   +E A  +  +++  G  P++ 
Sbjct: 345 --------------------------YNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVK 378

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T   +LK L + G++ +A  LF V+       ++      ++  CK   + +A +L+N +
Sbjct: 379 TSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNEL 438

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
              ++  D+  +  LIDGL KAG+L+   EL     + G++ D + +SS++  +   G V
Sbjct: 439 ESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQV 498

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
            +A   + +M   G  P++I+YSIL++G  +  +L +   L  +++ + + P    Y+ +
Sbjct: 499 DKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIV 558

Query: 395 IDGFCKSGKLRDGFSL 410
            D  CK  K ++   L
Sbjct: 559 EDMVCKDEKYKEWLDL 574



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 84/166 (50%), Gaps = 6/166 (3%)

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           ++ ++F FN L+ G  +++  +    L+  M +  + PD++T  +LI  + +   ++  +
Sbjct: 87  MMRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGL 146

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
                +++RG  PDV+T++ +I GL     I     +F  M++ G  P++  Y  L+  L
Sbjct: 147 AAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGL 206

Query: 569 IKECNLDAALKLFGQLTDR------GLEPDIITYNTIICGYCSLNS 608
               N++ ALK   ++ +          P++I+Y+ II G C + +
Sbjct: 207 CALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGN 252


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 263/550 (47%), Gaps = 19/550 (3%)

Query: 68  AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENY 122
           A+L+   L++  R + ++ F K +    +T     +    + D GC      Y+ +I++ 
Sbjct: 180 ARLLRAGLRT--RTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSL 237

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF-- 178
               +  E++++   M+  G   SPD+V    ++        V +   L   M  KG   
Sbjct: 238 CGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEP 297

Query: 179 --CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
               Y  +++ L +   ++ A  + RQ++ +G  P+ +T   I+     +G    ++ +F
Sbjct: 298 DVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMF 357

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             +   G  P +VTF++ +++ CK  + + A +++  M     +PDL+ YSIL+ G    
Sbjct: 358 RKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATE 417

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GR  + N L  +  D+G+  +   F+ ++ A+   G +  A+  +  M   G  P+V++Y
Sbjct: 418 GRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTY 477

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           S LI   C+ GRL +A   F Q++   LEP+ + Y SLI GFC  G L     L   M+ 
Sbjct: 478 STLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMS 537

Query: 417 RGL-KPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +G+ +P+     +++ SL   G + DA   F   + +   P +  FN+L+DG C + +  
Sbjct: 538 KGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKME 597

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
               +   M    I+PDV+T+  L+ G    G +   ++LF +ML + + P  +TYS ++
Sbjct: 598 KAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVL 657

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GLF     S    MF  M  +G A DI  Y +LL  L +    D A+ LF +L     +
Sbjct: 658 DGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCK 717

Query: 591 PDIITYNTII 600
            DI   NT+I
Sbjct: 718 FDITILNTVI 727



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 248/498 (49%), Gaps = 14/498 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ +I  + + G++ ++  +   M   G+   PD+V    ++  L  + ++ +   + R 
Sbjct: 267 FNTVIHGFFKQGEVSKACNLINEMVQKGV--EPDVVTYNSIVDALCKARAMDKAELVLRQ 324

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  +++G    G  + +  M R++  +G +P IVT N  +  LC +G+
Sbjct: 325 MVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGR 384

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             +A  +F  +   G  P++V++S L++ +  E +      L++ M +  +V +   ++I
Sbjct: 385 SKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNI 444

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    K G + E   +      +G++ DVV +S+++ A+  +G +  A++ + +M++ G
Sbjct: 445 LISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIG 504

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL-EPSLLTYSSLIDGFCKSGKLRDG 407
             PN + Y  LI G C  G LV+A  L  +++ + +  P+++ +SS+I   C  G++ D 
Sbjct: 505 LEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDA 564

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             +++ +I  G +P  V  + LI+G      M  A       V + + P++  +NTL+ G
Sbjct: 565 HDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSG 624

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+  +  D + LF  M    +KP  +T+++++ G+   G  S+A  +F +M+  G   D
Sbjct: 625 YCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVD 684

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           + TY  ++ GL +       + +F  +       DI I N ++N L K    + A  LF 
Sbjct: 685 IDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFA 744

Query: 583 QLTDRGLEPDIITYNTII 600
            ++  GL P++ TY  +I
Sbjct: 745 AISTSGLVPNVSTYGVMI 762



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 188/374 (50%), Gaps = 11/374 (2%)

Query: 242 VGPK--P-NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
            GP+  P +V T+  L++  C+  + +     +  ++   L    I  +  +  L  A R
Sbjct: 147 AGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKR 206

Query: 299 LKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL--PNVIS 355
             E  ++LL  + D G   + + +++V+ +  G      A+    RM   G    P+V+S
Sbjct: 207 TDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVS 266

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           ++ +I G  +QG + +AC L  +++ + +EP ++TY+S++D  CK+  +     +   M+
Sbjct: 267 FNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMV 326

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            +G++PD +  + +I+G        ++ + F +     LIP +  FN+ M   C+  R+ 
Sbjct: 327 DKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSK 386

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D  ++F  M      PD++++++L+ G A++G  +    LF  M  +G+  +   ++ +I
Sbjct: 387 DAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILI 446

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
               K   +   + +F  M+  GV PD+  Y+ L++   +   L  A++ F Q+   GLE
Sbjct: 447 SAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLE 506

Query: 591 PDIITYNTIICGYC 604
           P+ + Y+++I G+C
Sbjct: 507 PNTVVYHSLIHGFC 520



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 192/406 (47%), Gaps = 51/406 (12%)

Query: 93  QFGKTYNFFRLFRDS--LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           +F    N F    D   + +  C ++ LI  + + G +DE++ +F  M   G+   PD+V
Sbjct: 419 RFADMNNLFHSMADKGIVANCHC-FNILISAHAKRGMMDEAMLVFTEMQGQGV--RPDVV 475

Query: 151 --QRLMSCLVD----SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQV 204
               L+S        ++++ ++ ++          VY  L++G    G +  A  +  ++
Sbjct: 476 TYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEM 535

Query: 205 IQRGFV-PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           + +G   PNIV  + I+  LC  G++ +A  +F++++ +G +P +VTF++LI+ +C   K
Sbjct: 536 MSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 595

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +EKAF + + M+ + + PD++ Y+ L+ G  K+G++ +G  L    L + +K   V +S 
Sbjct: 596 MEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSI 655

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG---------------- 367
           V+D     G    A + +  M++ G   ++ +Y IL+KGLC+                  
Sbjct: 656 VLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 715

Query: 368 -------------------RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
                              R  EA  LF  +    L P++ TY  +I    K G + +  
Sbjct: 716 CKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEAD 775

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM--GDALR--FFFQSVRMTLI 450
           +++ +M K G  P + + + +I  L+  GD ++  ++   V  T+I
Sbjct: 776 TMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTII 821



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 39/278 (14%)

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE-----PS 387
           D+G A   + R+L  G     I  +  +K LC   R  EA      VL+ R+      P+
Sbjct: 173 DLGPAF--FARLLRAGLRTRTIEANTFLKCLCHAKRTDEAV----DVLLHRMSDLGCVPN 226

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
            ++Y+++I   C   + ++   +   M K G +     CS                    
Sbjct: 227 AISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR-----CS-------------------- 261

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
              P++  FNT++ G  +    +    L   M    ++PDV+T+  ++  +    ++  A
Sbjct: 262 ---PDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKA 318

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
            L+  QM+ +G+ PD +TY+AIIHG     +      MF+ M   G+ P I  +N  ++ 
Sbjct: 319 ELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSS 378

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L K      A ++F  +T +G  PD+++Y+ ++ GY +
Sbjct: 379 LCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYAT 416



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 156/375 (41%), Gaps = 60/375 (16%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +A  +++ ++    P P I FF            + +IH L        A  VF+ +VI 
Sbjct: 527 KAKELVSEMMSKGIPRPNIVFF------------SSIIHSLCNEGRVMDAHDVFN-LVIH 573

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
            G         R ++  F      LI+ Y  +GK++++  +   M  +GI   PD+V   
Sbjct: 574 IGD--------RPTIVTFNS----LIDGYCLVGKMEKAFGVLDAMVSVGI--EPDVV--- 616

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
                                      Y  L++G  + G I++   + R+++ +   P  
Sbjct: 617 --------------------------TYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTT 650

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           VT + +L  L   G+   A  +F  ++  G   ++ T+  L+   C+    ++A  L++ 
Sbjct: 651 VTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 710

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           +  MD   D+ I + +I+ L+K  R +E N+L       GL  +V  +  ++   +  G 
Sbjct: 711 LGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGS 770

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV--LIRRLEPSLLTY 391
           V  A   +  M   G  P+    + +I+ L Q+G +V+A     +V   I  LE S  T 
Sbjct: 771 VEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEAS--TT 828

Query: 392 SSLIDGFCKSGKLRD 406
           S L+  F   GK R+
Sbjct: 829 SLLMSLFSSKGKHRE 843


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 217/426 (50%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL  +G +  A  +   ++    VP+++T N I+  LC+  ++  A  L   +
Sbjct: 162 TFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARM 221

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G +PN  T+  ++N  CK      A  L   M    + P ++ Y+I+ID L K GRL
Sbjct: 222 MANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRL 281

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +          +G+K +V  ++S++ ++   G      Q    M+     PNV+++S L
Sbjct: 282 DDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSAL 341

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  L ++G+L EA  L+ +++ R +EP+ +TY+SLI G C   +L +   + D M+ +G 
Sbjct: 342 IDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGC 401

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    ++LING      + D +R F +     +I +   ++TL+ G C+ ++     K
Sbjct: 402 DPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKK 461

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  M    + P ++T+ +L+ G+   G L  A+ +  QM K  +  D+  Y+ IIHG+ 
Sbjct: 462 VFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMC 521

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +     +F  +   GV  DI  YN++L+ L K  +L  A  LF ++ + G EPD  
Sbjct: 522 NANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGC 581

Query: 595 TYNTII 600
           TYNT+I
Sbjct: 582 TYNTLI 587



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 244/492 (49%), Gaps = 11/492 (2%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
           K D++V +F  M       +     RL   L  +        LC+ M  KG         
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            ++N   R+  +  AF    ++ + G+ PN VT N +L  LC+ G++  A  L D ++L 
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
              P+++T +T++N  C + ++ +A  L   MM     P+   Y  +++ + K+G     
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            +LL     R +K  VV ++ ++D     G +  A+  +  M   G   NV +Y+ LI  
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGS 309

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C  GR  +   L   ++ R++ P+++T+S+LID   K GKL +   LY+ MI RG++P+
Sbjct: 310 FCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPN 369

Query: 423 AVVCSLLINGLMGDALRFFFQSVRMTLI------PNLFIFNTLMDGCCRLKRATDTVKLF 476
            +  + LI GL  D  R    +  M L+      P+++ +N L++G C+ K+  D ++LF
Sbjct: 370 TITYNSLIYGLCNDK-RLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLF 428

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M +  +  D +T++ LI+G      L  A  +F +M+ +G+ P ++TY+ ++ GL   
Sbjct: 429 RKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDN 488

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +   L +   M +  +  DI IYN++++ +     +D A  LF  L  +G++ DI +Y
Sbjct: 489 GELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSY 548

Query: 597 NTIICGYCSLNS 608
           N ++ G C  +S
Sbjct: 549 NIMLSGLCKRSS 560



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 212/394 (53%), Gaps = 5/394 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++N + + G   +A  + R++  R   P++VT   I+  LC +G++ +A S F  +
Sbjct: 232 TYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM 291

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G K NV T+++LI +FC   + +   QL   M+   + P+++ +S LID L K G+L
Sbjct: 292 ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKL 351

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +L    + RG++ + + ++S++        +  A Q  D M++ G  P++ +Y+IL
Sbjct: 352 TEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNIL 411

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+  ++ +   LF ++ +R +    +TYS+LI GFC+S KL     ++  M+ +G+
Sbjct: 412 INGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGV 471

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P  +  ++L++GL     + +AL    Q  +  +  ++ I+N ++ G C   +  D   
Sbjct: 472 HPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWS 531

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  +    +K D+ ++ +++ G+  + SLS A  LF +M + G  PD  TY+ +I    
Sbjct: 532 LFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHL 591

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           +G +I+  + + + M+R G + D +   ++++ML
Sbjct: 592 RGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML 625



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 211/422 (50%), Gaps = 5/422 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++NGL  K  +  A  +  +++  G  PN  T   IL R+C +G   +A  L   +    
Sbjct: 201 IVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRK 260

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            KP+VVT++ +I+  CK+ +L+ A   ++ M    +  ++  Y+ LI      GR  +G 
Sbjct: 261 IKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGA 320

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +LL   + R +  +VV FS+++D+ V  G +  A   Y+ M+  G  PN I+Y+ LI GL
Sbjct: 321 QLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGL 380

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C   RL EA  +   ++ +  +P + TY+ LI+GFCK+ ++ DG  L+  M  RG+  D 
Sbjct: 381 CNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADT 440

Query: 424 VVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  S LI G         A + F + V   + P +  +  L+DG C      + + +   
Sbjct: 441 VTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQ 500

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    ++ D+  + ++I G+ +   +  A  LF  +  +G+  D+ +Y+ ++ GL K  +
Sbjct: 501 MHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSS 560

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +S    +F+ M+ +G  PD   YN L+   ++  ++  +++L  ++   G   D  T   
Sbjct: 561 LSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKI 620

Query: 599 II 600
           ++
Sbjct: 621 VM 622



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 206/420 (49%), Gaps = 9/420 (2%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYE 182
           ++ E+V++ A M   G   +      +++ +  S +      L R M  +        Y 
Sbjct: 210 RVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYT 269

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            +++ L + G +++A     ++  +G   N+ T N ++   C  G+  + + L   ++  
Sbjct: 270 IIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR 329

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
              PNVVTFS LI++  KE KL +A  LYN M+   + P+ I Y+ LI GL    RL E 
Sbjct: 330 KITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEA 389

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           N+++   + +G   D+  ++ +++ +     V   ++ + +M   G + + ++YS LI+G
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQG 449

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            CQ  +L+ A  +F +++ + + P ++TY+ L+DG C +G+L +   + D M K  ++ D
Sbjct: 450 FCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELD 509

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
             + +++I+G+     + DA   F       +  ++  +N ++ G C+    ++   LF 
Sbjct: 510 IGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFR 569

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M     +PD  T+  LIR       +++++ L  +M + G + D  T   ++  L  G+
Sbjct: 570 KMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGE 629



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/363 (21%), Positives = 165/363 (45%), Gaps = 39/363 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+N  + G++D+++  F+ M   GI  +      L+             +L R M 
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        +  L++ L+++G +  A  ++ ++I RG  PN +T N ++  LC + ++ 
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLD 387

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ + D+++  G  P++ T++ LIN FCK  +++   +L+  M    ++ D + YS LI
Sbjct: 388 EANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLI 447

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM------ 344
            G  ++ +L    ++    + +G+   ++ ++ ++D     G++  A+   D+M      
Sbjct: 448 QGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKME 507

Query: 345 ---------LNG--------------------GFLPNVISYSILIKGLCQQGRLVEACGL 375
                    ++G                    G   ++ SY+I++ GLC++  L EA  L
Sbjct: 508 LDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADAL 567

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
           F ++     EP   TY++LI    +   +     L + M + G   DA    ++++ L  
Sbjct: 568 FRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSS 627

Query: 436 DAL 438
             L
Sbjct: 628 GEL 630


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 261/494 (52%), Gaps = 10/494 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI+ Y   G ++ ++ +F  + ++G+  +  +   L+       +V +  +L   M+  G
Sbjct: 333 LIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMG 392

Query: 178 FC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                 +  FL+ G  ++ ++ENA+ +    ++ G + ++VT N +L  LC  G++  A 
Sbjct: 393 LQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENG-IASVVTYNIVLLWLCELGKVNEAC 451

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           +L+D ++  G  P++V+++ +I   CK+  ++ A ++ N ++E  L P+ I Y+IL++G 
Sbjct: 452 NLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGS 511

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
           FK G  +    +    +  G+      F+S+++    +G V  A    +  +   F+P  
Sbjct: 512 FKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTS 571

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ +I G  ++G +  A  ++ ++    + P+++TY+SLI+GFCKS K+     ++D+
Sbjct: 572 MTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDD 631

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M ++GL+ D  V + LI G      M +A +FF + + + L PN  ++N ++     L  
Sbjct: 632 MKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNN 691

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               + L   M    I  D+  +T LI G+  +G LS A+ L+ +ML RG+ PD+  Y+ 
Sbjct: 692 MEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNV 751

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+GL     +     + K M+ N + P + +YN L+    KE NL  A +L  ++ D+G
Sbjct: 752 LINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKG 811

Query: 589 LEPDIITYNTIICG 602
           L PD  TY+ ++ G
Sbjct: 812 LVPDDTTYDILVNG 825



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 157/626 (25%), Positives = 297/626 (47%), Gaps = 62/626 (9%)

Query: 42  LIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQ-----SDMRDVASHVFDKMVIQFGK 96
           L+   +P  A++FFK           A ++ +LLQ      +    A H+ +K V  FG 
Sbjct: 69  LLHKADPRSALRFFKQVETKGGFAKTADVLCLLLQILASNPETHGDAKHLLNKYV--FGD 126

Query: 97  TYNFFRLFRDSLGDFGCDYSF----------LIENYVRIGKIDESVEIFAYMSDMGIYLS 146
           +    ++  + L +    Y F          L+ +YVR  KI E+VE F  M + G+   
Sbjct: 127 SAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPW 186

Query: 147 PDLVQRLMSCLVDSNSVGQYYKLCRAMRGK---GFC-VYEFLMNGLLRKGVIENAFHMHR 202
              V  L++ ++  N V   ++L   M  +   G C   + LM   L+ G    A     
Sbjct: 187 VPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFG 246

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP---------------- 246
           Q   RG   +  + + +++ +C    +  AS L +    +G  P                
Sbjct: 247 QAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLG 306

Query: 247 -------------------NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
                              NV   ++LI  +C    +  A +L++ ++E+ + P++ I+S
Sbjct: 307 NFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFS 366

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           +LI+   K G +++ NEL       GL+  V + + ++  +     +  A    D  +  
Sbjct: 367 VLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVEN 426

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G + +V++Y+I++  LC+ G++ EAC L+ +++ + + PSL++Y+ +I G CK G + D 
Sbjct: 427 G-IASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDA 485

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRMTLIPNLFIFNTLMDG 462
             + + +I+ GLKP+A+  ++L+ G    GD   A   F Q V   ++P  + FN++++G
Sbjct: 486 HEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIING 545

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C++ R ++           +  P  +T+  +I G   +G++ SA  ++ +M +  ++P+
Sbjct: 546 LCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPN 605

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           VITY+++I+G  K   + + L M   M+R G+  DI +Y  L+    K  +++ A K F 
Sbjct: 606 VITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFS 665

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNS 608
           +L + GL P+ I YN +I  Y +LN+
Sbjct: 666 KLLEVGLTPNTIVYNIMISAYRNLNN 691



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 151/625 (24%), Positives = 274/625 (43%), Gaps = 77/625 (12%)

Query: 36  NAILANLIKTNNPTPAIQFFK---------WTHNCVSSPNIAQLIHVLLQSDMRDVASHV 86
           N +L + ++ N  T A++ F+         W       P +  L+  +++ +M + A  +
Sbjct: 156 NYLLISYVRANKITEAVECFRAMLEDGVVPWV------PFVNVLLTAMIRRNMVEDAHRL 209

Query: 87  FDKMVIQ--FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
           FD+M  +  +G  Y    L R  L               + GK  E+   F   +  G+ 
Sbjct: 210 FDEMAERRIYGDCYTLQVLMRACL---------------KGGKFVEAERYFGQAAGRGLK 254

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHM 200
           L       ++  +   + +    KL       G+      Y  ++   +R G    A  +
Sbjct: 255 LDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRL 314

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             +++      N+     ++K  C+ G + +A  LFD ++ VG  PNV  FS LI    K
Sbjct: 315 KDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSK 374

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
              +EKA +LY  M  M L P + I + L+ G  K   L+    LL  A++ G+   VV 
Sbjct: 375 IGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVT 433

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           ++ V+     +G V  A   +D+M+  G  P+++SY+ +I G C++G + +A  +   ++
Sbjct: 434 YNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGII 493

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL------- 433
              L+P+ +TY+ L++G  K G     F+++D M+  G+ P     + +INGL       
Sbjct: 494 ESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVS 553

Query: 434 ---------------------------------MGDALRFFFQSVRMTLIPNLFIFNTLM 460
                                            +  A   + +  R  + PN+  + +L+
Sbjct: 554 EARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLI 613

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +G C+  +    +K+   M    ++ D+  +  LI G      + +A   F ++L+ GLT
Sbjct: 614 NGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLT 673

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+ I Y+ +I       N+   L++ K M  N +  D+ IY  L++ L+KE  L  AL L
Sbjct: 674 PNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDL 733

Query: 581 FGQLTDRGLEPDIITYNTIICGYCS 605
           + ++  RG+ PDI  YN +I G C+
Sbjct: 734 YSEMLCRGIVPDIFMYNVLINGLCN 758



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 226/460 (49%), Gaps = 8/460 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S LIE   +IG ++++ E++  M  MG+  +  ++  L+      N +   Y L     
Sbjct: 365 FSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAV 424

Query: 175 GKGFC---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
             G      Y  ++  L   G +  A ++  ++I +G  P++V+ N ++   C  G + +
Sbjct: 425 ENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDD 484

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  + + ++  G KPN +T++ L+    K+   E AF +++ M+   +VP    ++ +I+
Sbjct: 485 AHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIIN 544

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL K GR+ E  + L T + +      + ++ ++D YV  G +  A   Y  M      P
Sbjct: 545 GLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISP 604

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NVI+Y+ LI G C+  ++  A  +   +  + LE  +  Y++LI GFCK   + +    +
Sbjct: 605 NVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFF 664

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             +++ GL P+ +V +++I+       M  AL    + +   +  +L I+ +L+DG  + 
Sbjct: 665 SKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKE 724

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            + +  + L+  M    I PD+  + VLI G+ + G L +A  +  +M    +TP V+ Y
Sbjct: 725 GKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLY 784

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           + +I G FK  N+     +   M   G+ PD   Y++L+N
Sbjct: 785 NTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 824



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 164/322 (50%), Gaps = 4/322 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+E   + G  + +  +F  M   GI  +      +++ L     V +         
Sbjct: 504 YTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFI 563

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            + F      Y  +++G +++G I++A  ++R++ +    PN++T   ++   C + ++ 
Sbjct: 564 KQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMD 623

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + D +   G + ++  ++TLI  FCK   +E A + ++ ++E+ L P+ I+Y+I+I
Sbjct: 624 LALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMI 683

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
                   ++    L    ++  +  D+ +++S++D  +  G +  A+  Y  ML  G +
Sbjct: 684 SAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIV 743

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++  Y++LI GLC  G+L  A  +  ++    + P++L Y++LI G  K G L++ F L
Sbjct: 744 PDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRL 803

Query: 411 YDNMIKRGLKPDAVVCSLLING 432
           +D M+ +GL PD     +L+NG
Sbjct: 804 HDEMLDKGLVPDDTTYDILVNG 825


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 250/506 (49%), Gaps = 16/506 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++ +    G +D +V +F+ +   G+  +PD V    LMS L   + +     L   
Sbjct: 161 YNIILRSLCARGDVDRAVSLFSSLRRRGV--APDRVTYSTLMSGLAKHDQLDNALDLLDE 218

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCING 227
           M   G       Y  L++G  R G+ E A  +  Q+++  G  PN+ T   +L  LC  G
Sbjct: 219 MPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLG 278

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A  ++  ++    + + VT+  LI+  C+   ++ A ++Y+ M++  LV D+ +Y+
Sbjct: 279 RFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYN 338

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI G  + GR  E  +   +    G++  +  ++ +    +  G V  A +   ++ N 
Sbjct: 339 SLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLEND 397

Query: 348 GFL-PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               P+ +++  LI GLC+ G    A  +         E  + +YSS+I+ FCK G+  D
Sbjct: 398 ASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHD 457

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              +Y NM+K G KP++ V + LING      + DA++ + +       P +  +NTL+D
Sbjct: 458 ANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLID 517

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+ ++  +   L   M     KPD+ T+  LIRG+     +  A+ ++ ++L  GL  
Sbjct: 518 GLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQV 577

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           DV+ ++ +IHGL     +     ++  M+    +P++  YN L++   +  ++D A  L+
Sbjct: 578 DVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLW 637

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLN 607
             + D GL+PDI+TYNT I G CS N
Sbjct: 638 TAILDNGLKPDIVTYNTRIKGLCSCN 663



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 258/525 (49%), Gaps = 21/525 (4%)

Query: 104 FRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSD--MGIYLSPDLVQR--LM 154
           FRD     GC+     ++ L++ +VR  +  ++   FA +S    G  ++P+L     ++
Sbjct: 106 FRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIIL 165

Query: 155 SCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
             L     V +   L  ++R +G       Y  LM+GL +   ++NA  +  ++   G  
Sbjct: 166 RSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQ 225

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLL-VGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            + V  N +L      G    A  +++ L+   G  PN+ T+  +++  CK  + ++A +
Sbjct: 226 ADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGE 285

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +++ MM  +   D + Y ILI GL ++G +     +    +  GL LDV V++S++  + 
Sbjct: 286 VWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFC 345

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL-IRRLEPSL 388
            +G  G A + +D     G +  + +Y+I+ KGL   G + EA  L  Q+       P  
Sbjct: 346 EVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDK 404

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQ 443
           +T+ +LI G C++G     F + ++    G + D    S +IN     G   DA   +  
Sbjct: 405 VTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKN 464

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            V+    PN  ++N L++G CR+ +  D +K+++ M      P +IT+  LI G+     
Sbjct: 465 MVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEK 524

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A  L  +ML+RG  PD+ TY+++I GL + K + V L ++  +   G+  D+ ++N+
Sbjct: 525 YQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNI 584

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           L++ L     +D A  ++ ++ ++   P+++TYNT++ G+  + S
Sbjct: 585 LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGS 629



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 198/397 (49%), Gaps = 7/397 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++GL R G +++A  ++  +++ G V ++   N ++K  C  G+ G A   +D  
Sbjct: 301 TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDST 360

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY-NLMMEMDLVPDLIIYSILIDGLFKAGR 298
              G +  + T++ +         + +A +L   L  +    PD + +  LI GL + G 
Sbjct: 361 GFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGY 419

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
                E+L  A + G +LDV  +SS+++ +   G    A + Y  M+  G  PN   Y+ 
Sbjct: 420 ANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNA 479

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI G C+  ++ +A  ++ ++      P+++TY++LIDG CK+ K ++  SL   M++RG
Sbjct: 480 LINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERG 539

Query: 419 LKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
            KPD    + LI GL  D     ALR + + +   L  ++ + N L+ G C   +  +  
Sbjct: 540 FKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAF 599

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +++ M   N  P+++T+  L+ G    GS+  A  L+  +L  GL PD++TY+  I GL
Sbjct: 600 CIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGL 659

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
                   G+ +   +   G+ P +  +++L+  +IK
Sbjct: 660 CSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 215/479 (44%), Gaps = 62/479 (12%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKM 90
           +F +A  + + ++  N+    + +               LIH L +S   D A+ V+  M
Sbjct: 279 RFKEAGEVWSRMMANNHQADTVTY-------------GILIHGLCRSGDVDSAARVYSDM 325

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           V + G   +               Y+ LI+ +  +G+  E+ + +      GI       
Sbjct: 326 V-KAGLVLDV------------SVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTY 371

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVI 205
             +   L+DS  V +  +L + +     C      +  L++GL   G    AF +     
Sbjct: 372 NIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDAR 431

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
             G   ++ + + ++ R C +G+  +A+ ++  ++  G KPN   ++ LIN FC+ +K+ 
Sbjct: 432 NSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKIN 491

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
            A ++Y  M      P +I Y+ LIDGL KA + +E + L    L+RG K D+  ++S++
Sbjct: 492 DAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLI 551

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
                   V  A++ +D +L+ G   +V+ ++ILI GLC  G++ EA  ++ ++  +   
Sbjct: 552 RGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCS 611

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
           P+L+TY++L+DGF + G +    SL+  ++  GLKPD V                     
Sbjct: 612 PNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVT-------------------- 651

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
                     +NT + G C   R  + V L   +    I P VIT ++L+R +   G +
Sbjct: 652 ----------YNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/497 (28%), Positives = 247/497 (49%), Gaps = 20/497 (4%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV-------GQYY----KLCRAMRG 175
           K D++   F  + D     +  L ++ + C++  N +        QYY     L + M  
Sbjct: 60  KNDDASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMEL 119

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            G     C    L+N       ++  F +  +VI+ G  P I+T   ++  LC  G+   
Sbjct: 120 AGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQ 179

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  LFD ++  G +P+V T++T+IN  CK  +   A  L   M E+   PD++ YS LID
Sbjct: 180 ALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLID 239

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K   + E  ++      +G+   VV ++S++           A    + M +   +P
Sbjct: 240 SLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMP 299

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +++++S+LI   C++G ++EA G+   +    +EP+++TY+SL+ G+    ++ +   L+
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           D MI RG KPD    S+LING      + +A + F + +   L PN   + TL+   C+L
Sbjct: 360 DVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  +  +LF  M      PD+ T++VL+ G   QG L  A  LF  M    L P+++ Y
Sbjct: 420 GKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMY 479

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I  + K  N++    +F  +  +G+ PD+ IY  ++N L KE  LD AL+ F ++ +
Sbjct: 480 TILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEE 539

Query: 587 RGLEPDIITYNTIICGY 603
            G  P+  +YN II G+
Sbjct: 540 DGCPPNEFSYNVIIRGF 556



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 219/418 (52%), Gaps = 5/418 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL + G    A  +   ++ RG  P++ T   I+  LC  G+   A+ L   +
Sbjct: 163 TFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKM 222

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             VG +P+VVT+STLI++ CK+  + +A  +++ M    + P ++ Y+ LI GL    R 
Sbjct: 223 GEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRW 282

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE + +L       +  D+V FS ++D +   G+V  A      M   G  PNVI+Y+ L
Sbjct: 283 KEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSL 342

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G   Q  +VEA  LF  ++ R  +P + +YS LI+G+C   ++ +   L++ MI +GL
Sbjct: 343 MHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL 402

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ V  + LI+     G + +A   F        +P+L  ++ L++G C+        +
Sbjct: 403 TPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFR 462

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    +KP+++ +T+LI  +   G+L+ A  LF ++   GL PDV  Y+ II+GL 
Sbjct: 463 LFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLC 522

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           K   +   L  F+ ME +G  P+   YNV++   ++  +   A++L G++ D+G   D
Sbjct: 523 KEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 225/434 (51%), Gaps = 8/434 (1%)

Query: 179 CVYEF--LMNGLLR-KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           C+ +F  L++ ++R +   +    + +Q+   G  PN  T N ++   C+   +    S+
Sbjct: 89  CIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSV 148

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
              ++ +G +P ++TF+TLIN  CK  +  +A +L++ M+     PD+  Y+ +I+GL K
Sbjct: 149 LAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCK 208

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G       L+    + G + DVV +S+++D+      V  A+  +  M   G  P V+S
Sbjct: 209 MGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVS 268

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI+GLC   R  EA  +  ++    + P ++T+S LID FCK G + +   +   M 
Sbjct: 269 YTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMT 328

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G++P+ +  + L++G      + +A + F   +     P++F ++ L++G C +KR  
Sbjct: 329 EMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRID 388

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  +LF  M    + P+ +++T LI      G L  A  LF  M   G  PD+ TYS ++
Sbjct: 389 EAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLL 448

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G  K   +     +F+ M+   + P++ +Y +L++ + K  NL+ A KLF +L   GL+
Sbjct: 449 EGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQ 508

Query: 591 PDIITYNTIICGYC 604
           PD+  Y TII G C
Sbjct: 509 PDVQIYTTIINGLC 522



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 230/454 (50%), Gaps = 9/454 (1%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           C  + LI  +  +  +D    + A +  +G+  +      L++ L  +    Q  +L   
Sbjct: 127 CTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDD 186

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  ++NGL + G    A  + +++ + G  P++VT + ++  LC +  
Sbjct: 187 MVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRL 246

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  P VV++++LI   C  ++ ++A  + N M  ++++PD++ +S+
Sbjct: 247 VNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSL 306

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID   K G + E   +L T  + G++ +V+ ++S+M  Y    +V  A + +D M+  G
Sbjct: 307 LIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRG 366

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V SYSILI G C   R+ EA  LF +++ + L P+ ++Y++LI  FC+ GKLR+  
Sbjct: 367 CKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAR 426

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+ +M   G  PD    S+L+ G      +G A R F       L PNL ++  L+D  
Sbjct: 427 ELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSM 486

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+        KLF  + ++ ++PDV  +T +I G+  +G L  A+  F +M + G  P+ 
Sbjct: 487 CKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNE 546

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
            +Y+ II G  + K+ S  + +   M   G   D
Sbjct: 547 FSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 171/349 (48%), Gaps = 6/349 (1%)

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVVVFS 322
           ++ A   +N M+    +P +I ++ L+  + +  +  +    L   ++  GL  +    +
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            +++ +  +  V        +++  G  P +I+++ LI GLC+ G   +A  LF  ++ R
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----A 437
             +P + TY+++I+G CK G+      L   M + G +PD V  S LI+ L  D     A
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           L  F       + P +  + +L+ G C   R  +   +   M   NI PD++T ++LI  
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
              +G++  A  +   M + G+ P+VITY++++HG      +     +F +M   G  PD
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPD 370

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +  Y++L+N       +D A +LF ++  +GL P+ ++Y T+I  +C L
Sbjct: 371 VFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 226/423 (53%), Gaps = 9/423 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVI--QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           ++N ++++G+   A   +   +  +    PN+++ N ++K +C  G +  A  +F  + +
Sbjct: 141 VLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAI 200

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
              +P+V T+ TL++  CKE ++++A  L + M      P  + +++LI+GL K G +  
Sbjct: 201 QKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVR 260

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             +L+     +G   + V ++++++     G + +AV   DRM+    +PN ++Y  LI 
Sbjct: 261 VTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLIN 320

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GL +QGR V+   L   +  R    +   YS+LI G  K  K  +   L+  M+++G +P
Sbjct: 321 GLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQP 380

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           + VV S LI+GL     + +A     + V     PN F +++L+ G  +   +   ++++
Sbjct: 381 NIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVW 440

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M   N  P+ I ++VLI G+   G L  A++++  ML RGL PDV+ YS++IHGL   
Sbjct: 441 KEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNA 500

Query: 537 KNISVGLHMFKLM--ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
            ++ VGL +F  M  + +   PD+  YN+LL  L K+ ++  A+ L   + DRG  PD+I
Sbjct: 501 GSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLI 560

Query: 595 TYN 597
           T N
Sbjct: 561 TCN 563



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 215/432 (49%), Gaps = 21/432 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  LM+GL ++  I+ A  +  ++   G  P+ VT N ++  LC  G +   + L D +
Sbjct: 209 TYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM 268

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            L G  PN VT++T+IN  C + KL+KA  L + M+    VP+ + Y  LI+GL K GR 
Sbjct: 269 FLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRS 328

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +G  LL +  +RG   +   +S+++           A+  + +M+  G  PN++ YS L
Sbjct: 329 VDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSAL 388

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC++G+L EA  +  +++ +   P+  TYSSLI GF K+G  +    ++  M K   
Sbjct: 389 IDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNC 448

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ +  S+LI+GL  D     A+  +   +   L P++  +++++ G C        +K
Sbjct: 449 VPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLK 508

Query: 475 LF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           LF  ML    + +PDV+T+ +L+R +  Q S+S AI L   ML RG  PD+IT +  ++ 
Sbjct: 509 LFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA 568

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L +  N       F               + L+  L K   +  A K+   +  + L P+
Sbjct: 569 LREKLNPPQDGREF--------------LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPN 614

Query: 593 IITYNTIICGYC 604
             T+  II   C
Sbjct: 615 ASTWERIIPELC 626



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 192/370 (51%), Gaps = 7/370 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNV++F+ +I A CK   +++A +++  M      PD+  Y  L+DGL K  R+ E   L
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L      G     V F+ +++     GD+ R  +  D M   G +PN ++Y+ +I GLC 
Sbjct: 230 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 289

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G+L +A  L  +++  +  P+ +TY +LI+G  K G+  DG  L  ++ +RG   +   
Sbjct: 290 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 349

Query: 426 CSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            S LI+GL  +     A+  + + V     PN+ +++ L+DG CR  +  +  ++   M 
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 409

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                P+  T++ LI+G    G+   AI ++ +M K    P+ I YS +IHGL +   + 
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 469

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL--TDRGLEPDIITYNT 598
             + M+  M   G+ PD+  Y+ +++ L    +++  LKLF ++   +   +PD++TYN 
Sbjct: 470 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 529

Query: 599 IICGYCSLNS 608
           ++   C  NS
Sbjct: 530 LLRALCKQNS 539



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 49/331 (14%)

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRM------------------LNGGFLPN--------- 352
            F S+++ Y   GD G   Q +DRM                       LP          
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 353 ---------VISYSILIKGLCQQG---RLVE--ACGLFGQVLIRRLEPSLLTYSSLIDGF 398
                    V S++ ++  + Q+G   R +E   CG+ G+     + P++L+++ +I   
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKT---NISPNVLSFNLVIKAM 182

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           CK G +     ++  M  +  +PD      L++GL     + +A+    +       P+ 
Sbjct: 183 CKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSS 242

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             FN L++G C+        KL   M +    P+ +T+  +I G+  +G L  A+ L  +
Sbjct: 243 VTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 302

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M+     P+ +TY  +I+GL K      G+H+   +E  G   +   Y+ L++ L KE  
Sbjct: 303 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEK 362

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            + A+ L+ ++ ++G +P+I+ Y+ +I G C
Sbjct: 363 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLC 393



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 145/320 (45%), Gaps = 31/320 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI   V+ G+  + V + + + + G + +      L+S L       +   L + M 
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 374

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG      VY  L++GL R+G ++ A  +  +++ +G  PN  T + ++K     G   
Sbjct: 375 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 434

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  ++  +      PN + +S LI+  C++ KL +A  ++  M+   L PD++ YS +I
Sbjct: 435 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 494

Query: 291 DGLFKAGRLKEG----NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            GL  AG ++ G    NE+L    D   + DVV ++ ++ A      +  A+   + ML+
Sbjct: 495 HGLCNAGSVEVGLKLFNEMLCQESDS--QPDVVTYNILLRALCKQNSISHAIDLLNSMLD 552

Query: 347 GGFLPNVISYSILIKGLCQQ---------------------GRLVEACGLFGQVLIRRLE 385
            G  P++I+ +I +  L ++                      R+V A  +   +L + L 
Sbjct: 553 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLP 612

Query: 386 PSLLTYSSLIDGFCKSGKLR 405
           P+  T+  +I   CK  K++
Sbjct: 613 PNASTWERIIPELCKPKKVQ 632


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 227/426 (53%), Gaps = 9/426 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVI--QRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           +  ++N ++++G+   A   +   +  +    PN+++ N ++K +C  G +  A  +F  
Sbjct: 154 FNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 213

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           + +   +P+V T+ TL++  CKE ++++A  L + M      P  + +++LI+GL K G 
Sbjct: 214 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 273

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +    +L+     +G   + V ++++++     G + +AV   DRM+    +PN ++Y  
Sbjct: 274 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 333

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI GL +QGR V+   L   +  R    +   YS+LI G  K  K  +   L+  M+++G
Sbjct: 334 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 393

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
            +P+ VV S LI+GL     + +A     + V     PN F +++L+ G  +   +   +
Sbjct: 394 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 453

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +++  M   N  P+ I ++VLI G+   G L  A++++  ML RGL PDV+ YS++IHGL
Sbjct: 454 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 513

Query: 534 FKGKNISVGLHMFKLM--ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
               ++ VGL +F  M  + +   PD+  YN+LL  L K+ ++  A+ L   + DRG  P
Sbjct: 514 CNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNP 573

Query: 592 DIITYN 597
           D+IT N
Sbjct: 574 DLITCN 579



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 215/432 (49%), Gaps = 21/432 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  LM+GL ++  I+ A  +  ++   G  P+ VT N ++  LC  G +   + L D +
Sbjct: 225 TYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM 284

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            L G  PN VT++T+IN  C + KL+KA  L + M+    VP+ + Y  LI+GL K GR 
Sbjct: 285 FLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRS 344

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +G  LL +  +RG   +   +S+++           A+  + +M+  G  PN++ YS L
Sbjct: 345 VDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSAL 404

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC++G+L EA  +  +++ +   P+  TYSSLI GF K+G  +    ++  M K   
Sbjct: 405 IDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNC 464

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ +  S+LI+GL  D     A+  +   +   L P++  +++++ G C        +K
Sbjct: 465 VPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLK 524

Query: 475 LF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           LF  ML    + +PDV+T+ +L+R +  Q S+S AI L   ML RG  PD+IT +  ++ 
Sbjct: 525 LFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA 584

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L +  N       F               + L+  L K   +  A K+   +  + L P+
Sbjct: 585 LREKLNPPQDGREF--------------LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPN 630

Query: 593 IITYNTIICGYC 604
             T+  II   C
Sbjct: 631 ASTWERIIPELC 642



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 192/370 (51%), Gaps = 7/370 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNV++F+ +I A CK   +++A +++  M      PD+  Y  L+DGL K  R+ E   L
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L      G     V F+ +++     GD+ R  +  D M   G +PN ++Y+ +I GLC 
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 305

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G+L +A  L  +++  +  P+ +TY +LI+G  K G+  DG  L  ++ +RG   +   
Sbjct: 306 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 365

Query: 426 CSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            S LI+GL  +     A+  + + V     PN+ +++ L+DG CR  +  +  ++   M 
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                P+  T++ LI+G    G+   AI ++ +M K    P+ I YS +IHGL +   + 
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 485

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL--TDRGLEPDIITYNT 598
             + M+  M   G+ PD+  Y+ +++ L    +++  LKLF ++   +   +PD++TYN 
Sbjct: 486 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 545

Query: 599 IICGYCSLNS 608
           ++   C  NS
Sbjct: 546 LLRALCKQNS 555



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 49/331 (14%)

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRM------------------LNGGFLPN--------- 352
            F S+++ Y   GD G   Q +DRM                       LP          
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 141

Query: 353 ---------VISYSILIKGLCQQG---RLVE--ACGLFGQVLIRRLEPSLLTYSSLIDGF 398
                    V S++ ++  + Q+G   R +E   CG+ G+     + P++L+++ +I   
Sbjct: 142 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKT---NISPNVLSFNLVIKAM 198

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           CK G +     ++  M  +  +PD      L++GL     + +A+    +       P+ 
Sbjct: 199 CKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSS 258

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             FN L++G C+        KL   M +    P+ +T+  +I G+  +G L  A+ L  +
Sbjct: 259 VTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 318

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M+     P+ +TY  +I+GL K      G+H+   +E  G   +   Y+ L++ L KE  
Sbjct: 319 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEK 378

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            + A+ L+ ++ ++G +P+I+ Y+ +I G C
Sbjct: 379 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLC 409



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 145/320 (45%), Gaps = 31/320 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI   V+ G+  + V + + + + G + +      L+S L       +   L + M 
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 390

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG      VY  L++GL R+G ++ A  +  +++ +G  PN  T + ++K     G   
Sbjct: 391 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 450

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  ++  +      PN + +S LI+  C++ KL +A  ++  M+   L PD++ YS +I
Sbjct: 451 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 510

Query: 291 DGLFKAGRLKEG----NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            GL  AG ++ G    NE+L    D   + DVV ++ ++ A      +  A+   + ML+
Sbjct: 511 HGLCNAGSVEVGLKLFNEMLCQESDS--QPDVVTYNILLRALCKQNSISHAIDLLNSMLD 568

Query: 347 GGFLPNVISYSILIKGLCQQ---------------------GRLVEACGLFGQVLIRRLE 385
            G  P++I+ +I +  L ++                      R+V A  +   +L + L 
Sbjct: 569 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLP 628

Query: 386 PSLLTYSSLIDGFCKSGKLR 405
           P+  T+  +I   CK  K++
Sbjct: 629 PNASTWERIIPELCKPKKVQ 648


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 218/417 (52%), Gaps = 19/417 (4%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNA----------SSLFDVLLLVGPKPNVVTFS 252
           ++ + GF P++VT N +L  LC+  +I  A           SLFD ++ +G  P V+TF+
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFN 225

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           TLIN  C E ++ +A  L N M+   L  D++ Y  +++G+ K G  K    LL    + 
Sbjct: 226 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 285

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            +K DVV++S+++D     G    A   +  ML  G  PNV +Y+ +I G C  GR  +A
Sbjct: 286 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 345

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             L   ++ R + P +LT+++LI    K GKL +   L D M+ R + PD V  + +I G
Sbjct: 346 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 405

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                   DA   F     +   P++  FNT++D  CR KR  + ++L   +    +  +
Sbjct: 406 FCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 461

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
             T+  LI G     +L++A  LF +M+  G+ PD IT + +++G  + + +   L +F+
Sbjct: 462 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 521

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +++ + +  D   YN++++ + K   +D A  LF  L   G+EPD+ TYN +I G+C
Sbjct: 522 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 578



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 235/472 (49%), Gaps = 26/472 (5%)

Query: 127 KIDESVEIFAYMSDMG--------IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGK 176
           +I E++ +F YM + G        I L+P ++    L++ L     V +   L   M GK
Sbjct: 191 RISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 250

Query: 177 GFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G  +    Y  ++NG+ + G  ++A ++  ++ +    P++V  + I+ RLC +G   +A
Sbjct: 251 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 310

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             LF  +L  G  PNV T++ +I+ FC   +   A +L   M+E ++ PD++ ++ LI  
Sbjct: 311 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 370

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
             K G+L E  +L    L R +  D V ++S++  +        A   +D M +    P+
Sbjct: 371 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PD 426

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V++++ +I   C+  R+ E   L  ++  R L  +  TY++LI GFC+   L     L+ 
Sbjct: 427 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 486

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP-NLFIFNTLMDGCCRL 466
            MI  G+ PD + C++L+ G      + +AL  F + ++M+ I  +   +N ++ G C+ 
Sbjct: 487 EMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKG 545

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  +   LF  + ++ ++PDV T+ V+I G   + ++S A +LF +M   G  PD  TY
Sbjct: 546 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 605

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           + +I G  K   I   + +   M  NG + D     ++ + LI +  LD + 
Sbjct: 606 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKSF 656



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 197/400 (49%), Gaps = 34/400 (8%)

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           V CNK++       +   A SL+  + +     N+ +F+ LI  FC   KL  +   +  
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           + ++   PD++ ++ L+ GL    R+ E   L    ++ G                    
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG-------------------- 206

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
                  +D+M+  G  P VI+++ LI GLC +GR++EA  L  +++ + L   ++TY +
Sbjct: 207 -----SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 261

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMT 448
           +++G CK G  +   +L   M +  +KPD V+ S +I+     G   DA   F + +   
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + PN+F +N ++DG C   R +D  +L   M    I PDV+T   LI     +G L  A 
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 381

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  +ML R + PD +TY+++I+G  K        HMF LM     +PD+  +N ++++ 
Sbjct: 382 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 437

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            +   +D  ++L  +++ RGL  +  TYNT+I G+C +++
Sbjct: 438 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 477



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 16/328 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ +   G+  ++  +   M +  I  +PD++    L+S  V    + +  KLC  
Sbjct: 329 YNCMIDGFCSFGRWSDAQRLLRDMIEREI--NPDVLTFNALISASVKEGKLFEAEKLCDE 386

Query: 173 MRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +        Y  ++ G  +    ++A HM   +      P++VT N I+   C   +
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKR 442

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +     L   +   G   N  T++TLI+ FC+   L  A  L+  M+   + PD I  +I
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ G  +  +L+E  EL        + LD V ++ ++        V  A   +  +   G
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 562

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V +Y+++I G C +  + +A  LF ++     EP   TY++LI G  K+G++    
Sbjct: 563 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 622

Query: 409 SLYDNMIKRGLKPDA----VVCSLLING 432
            L   M   G   DA    +V  L+ +G
Sbjct: 623 ELISEMRSNGFSGDAFTIKMVADLITDG 650


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 230/439 (52%), Gaps = 6/439 (1%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           G  V++ L +  +  G++E A     ++     +P   +CN +L RL  +G        F
Sbjct: 218 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 277

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + ++  G  P+V T++ +I+  CKE  LE + +L+  M EM L PD++ Y+ LIDG  K 
Sbjct: 278 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 337

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G L+E   L     D G   D++ ++ +++ Y     + RA + +  M N G  PNV++Y
Sbjct: 338 GSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTY 397

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           S LI   C++G +  A  LF  +    L P+  TY+SLID  CK+G L + + L ++M++
Sbjct: 398 STLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ 457

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G+K + V  + L++GL     M +A   F   ++  + PN  ++  L+ G  + +R  D
Sbjct: 458 AGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMED 517

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            +K+   M   NIKPD+I +  +I G  SQ  L    L+  +M  RG++ + +  + II 
Sbjct: 518 AMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIID 577

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             FK    S  L+ F+ M+  GV   I  Y VL++ L K   ++ A+  F ++   GL+P
Sbjct: 578 AYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQP 637

Query: 592 DIITYNTIICGYCSLNSCL 610
           ++  Y ++I G C  N+C+
Sbjct: 638 NVAVYTSLIDGLCK-NNCI 655



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 147/579 (25%), Positives = 284/579 (49%), Gaps = 21/579 (3%)

Query: 46  NNPTPAIQFFKWTHNCV----SSPNIAQLIHVLLQ----SDMRDVASHVFDKMVIQFG-K 96
            +P  A++FFKW  + V    ++ +   ++H++ +    +D  D    V     +  G  
Sbjct: 141 EDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFP 200

Query: 97  TYNFFRLF---RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
             N F +    R+        +  L   +V +G ++E+ E F+ M +            L
Sbjct: 201 VCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFL 260

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +  L  S +     K    M G G       Y  +++ L ++G +EN+  +  Q+ + G 
Sbjct: 261 LHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGL 320

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P++VT N ++      G +   +SLF+ +  VG  P+++T++ LIN +CK  K+ +AF+
Sbjct: 321 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 380

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
            ++ M    L P+++ YS LID   K G ++   +L +     GL  +   ++S++DA  
Sbjct: 381 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANC 440

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G++  A +  + ML  G   N+++Y+ L+ GLC+ GR++EA  +F  +L   + P+  
Sbjct: 441 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 500

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSV 445
            Y++L+ G+ K+ ++ D   +   M +  +KPD ++   +I G       +  +   + +
Sbjct: 501 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 560

Query: 446 RMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           +   I  N  I  T++D   +  +++D +  F  M    ++  ++T+ VLI G+   G +
Sbjct: 561 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIV 620

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+  F +ML  GL P+V  Y+++I GL K   I     +F  M+  G+ PDI  +  L
Sbjct: 621 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTAL 680

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           ++  +K  NL  AL L  ++T+  +E D+  Y +++ G+
Sbjct: 681 IDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 719



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 243/507 (47%), Gaps = 47/507 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+   + G ++ S  +F  M +MG  LSPD+V                        
Sbjct: 292 YNVMIDYLCKEGDLENSRRLFVQMREMG--LSPDVV------------------------ 325

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++G  + G +E    +  ++   G VP+I+T N ++   C   ++  A  
Sbjct: 326 -----TYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 380

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            F  +   G KPNVVT+STLI+AFCKE  ++ A +L+  M    L+P+   Y+ LID   
Sbjct: 381 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANC 440

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           KAG L E  +LL   L  G+KL++V +++++D     G +  A + +  ML  G  PN  
Sbjct: 441 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 500

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ L+ G  +  R+ +A  +  Q+    ++P L+ Y S+I G C   KL +   + + M
Sbjct: 501 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 560

Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
             RG+  + V+ + +I+     G   DAL FF +   + +   +  +  L+DG C+    
Sbjct: 561 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIV 620

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              V  F  M    ++P+V  +T LI G+     + SA  LF +M  RG+TPD+  ++A+
Sbjct: 621 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTAL 680

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  K  N+   L +   M    +  D+ +Y  L++   +   L  A K F ++ ++G+
Sbjct: 681 IDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 740

Query: 590 EPDIITYNTIICGYCSLNSCLIDGYFK 616
            P+      ++C       CL+  Y+K
Sbjct: 741 LPE-----EVLC------ICLLREYYK 756



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 205/436 (47%), Gaps = 18/436 (4%)

Query: 106 DSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLV 158
           + + D GC      Y+ LI  Y +  K+  + E F+ M + G  L P++V    L+    
Sbjct: 348 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG--LKPNVVTYSTLIDAFC 405

Query: 159 DSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIV 214
               +    KL   MR  G    EF    L+    + G +  A+ +   ++Q G   NIV
Sbjct: 406 KEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 465

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T   +L  LC  G++  A  +F  +L  G  PN   ++ L++ + K  ++E A ++   M
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 525

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            E ++ PDLI+Y  +I G     +L+E   +L     RG+  + V+ ++++DAY   G  
Sbjct: 526 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 585

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A+  +  M + G    +++Y +LI GLC+ G +  A   F ++L   L+P++  Y+SL
Sbjct: 586 SDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSL 645

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTL 449
           IDG CK+  +     L+D M  RG+ PD    + LI+G +      +AL    +   + +
Sbjct: 646 IDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAI 705

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
             +L ++ +L+ G  +        K F  M    I P+ +    L+R    +G L  AI 
Sbjct: 706 EFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIE 765

Query: 510 LFFQMLKRGLTPDVIT 525
           L  +M + GL  +  T
Sbjct: 766 LKNEMERMGLITESAT 781



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 72/164 (43%)

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
           S R   +    +F+ L      L    +  + F  M  +   P   +   L+  ++  G+
Sbjct: 210 STRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGN 269

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
                  F  M+  G+ P V TY+ +I  L K  ++     +F  M   G++PD+  YN 
Sbjct: 270 GQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNS 329

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++   K  +L+    LF ++ D G  PDIITYN +I  YC   
Sbjct: 330 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFE 373


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 161/624 (25%), Positives = 278/624 (44%), Gaps = 46/624 (7%)

Query: 7   NLLTVWRSINKCYCSESKTHISDLQFN--QANAILANLIKTNNPTPAIQFFKWTHNCVSS 64
           NLL   ++ ++CY    +   + +  N    N ++ +  +T     A+  F+        
Sbjct: 127 NLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCK 186

Query: 65  PNIAQ---LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD---YSFL 118
           P++     L+  L ++ M + A  VF +M+               ++G    D   ++ +
Sbjct: 187 PDLHTFLILVDCLCKAGMDEKAFEVFHEMM---------------AMGFVPPDRALHTAM 231

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGK 176
           +   ++  ++ E+ E+F  M   G    PD +    ++  L  +    +  K+   M  K
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCG--FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289

Query: 177 GFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
             CV     Y  L+N L + G +E A  + R +   GF PN V    ++     +G++  
Sbjct: 290 A-CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A SLFD ++  G +P+V+T + +I+  CK    E+A + +  MM     P+++ Y+ +I 
Sbjct: 349 ACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQ 408

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL K GR+     ++   +  G   D V +  ++D +  +G +  A Q  D +      P
Sbjct: 409 GLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP 468

Query: 352 NVISYSILIKGLCQQGRLVEACG-LFGQ--VLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           N+  YS L+KGLC  G +      LF Q       L+P L    S+I G CK+G+L +  
Sbjct: 469 NLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--SIIVGLCKTGRLDEAC 526

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-------MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            ++  M+  G KPDA   ++LINGL       +  A         +  +P+   +  L  
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCI 586

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C++      VK+           DV+ +T L  G+  QG +  A+ LF +M+++G  P
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D   Y  II+GL KGK +      F  M   G  P +A Y  L+  L    N+D A   F
Sbjct: 647 DAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706

Query: 582 GQLTDRG-LEPDIITYNTIICGYC 604
             +  RG L   ++ Y+ +I G+C
Sbjct: 707 EGMLARGELVGSVMIYDALIHGFC 730



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 158/630 (25%), Positives = 279/630 (44%), Gaps = 88/630 (13%)

Query: 37  AILANLIKTNNPTPAIQFFKW------------THNCVSSPNIAQLIHVLLQSDMRDVAS 84
           A+L +L  T     AI FF+W            T+NC+ +         LL ++      
Sbjct: 91  AVLRSLKVTGT---AISFFRWAGEQAGFQHDVFTYNCLMN---------LLVAEKNYSQC 138

Query: 85  HVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
           +   + +++ G   N F             ++ LI ++ R  + D++V  F  M      
Sbjct: 139 YAIHEEMLKAGIAPNTF------------SFNILIRSFARTRRADDAVTCFEIMKRK--R 184

Query: 145 LSPDLVQRLM--SCLVDSNSVGQYYKLCRAMRGKGF-----CVYEFLMNGLLRKGVIENA 197
             PDL   L+   CL  +    + +++   M   GF      ++  ++  LL+   ++ A
Sbjct: 185 CKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEA 244

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
             +  Q+ + GF P+ +  N ++  L   G    A  + D +L     P  VT+  L+N+
Sbjct: 245 REVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNS 304

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
            CK   LE+A +L+ +M      P+ +IY+ LI G  K+GR+KE   L    ++ G + D
Sbjct: 305 LCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPD 364

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           V+  + ++D     G+  +A ++++ M+ GG  PNV++Y+ +I+GL + GR+  A  +  
Sbjct: 365 VITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD--------------- 422
            ++     P  +TY  L+DGFCK G+L +   L D + K    P+               
Sbjct: 425 GMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGG 484

Query: 423 ----------------------AVVCSLLI----NGLMGDALRFFFQSVRMTLIPNLFIF 456
                                  + CS+++     G + +A R F + V     P+   +
Sbjct: 485 SVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTY 544

Query: 457 NTLMDGCCRLK--RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           N L++G CR +  R      L   + M    PD +T+T L  G+   G +  A+ +  + 
Sbjct: 545 NILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEA 604

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
             RG   DV+ Y+A+  GL     +   + +F+ M R G APD A Y  ++N LIK   L
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKL 664

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + A K F ++  +G +P + TY  ++   C
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALC 694



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 223/473 (47%), Gaps = 44/473 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  LMN L+ +      + +H ++++ G  PN  + N +++      +  +A + F+++
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP-DLIIYSILIDGLFKAGR 298
                KP++ TF  L++  CK    EKAF++++ MM M  VP D  +++ ++  L KA R
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +KE  E+       G   D + +++++D     G    A++  D ML    +P  ++Y I
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+  LC+ G L  A  LF  +      P+ + Y+SLI GF KSG++++  SL+D M++ G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
            +PD +  +++I+GL        A + F + +R    PN+  + T++ G  ++ R  +  
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           ++   M  +   PD +T+  L+ G    G L  A  L  ++ K   +P++  YS+++ GL
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGL 480

Query: 534 FKG------------------KNISVGL------------------HMFKLMERNGVAPD 557
             G                  +N+  GL                   +F+ M   G  PD
Sbjct: 481 CDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPD 540

Query: 558 IAIYNVLLNMLIK--ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
              YN+L+N L +  E  ++ A  L   L   G  PD +TY  +  G C +  
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGE 593



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 206/472 (43%), Gaps = 54/472 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  + + G++ E+  +F  M + G    PD++    ++  L  S +  Q  K    
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAG--YRPDVITHTVMIDGLCKSGNFEQAAKSFEE 390

Query: 173 MRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           M  +G C      Y  ++ GL + G + NAF + + +I  G  P+ VT   +L   C  G
Sbjct: 391 MM-RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFC---------------------------- 259
           ++  A+ L D L      PN+  +S+L+   C                            
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLC 509

Query: 260 --------KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA--GRLKEGNELLLTA 309
                   K  +L++A +++  M+     PD   Y+ILI+GL ++   R++    LL   
Sbjct: 510 CSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
              G   D V ++ +      IG+V RAV+  +   + G+  +V++Y+ L  GLC QG++
Sbjct: 570 EMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV 629

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
             A  LF +++ +   P    Y  +I+G  K  KL D    +D MI +G KP     + L
Sbjct: 630 DRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTAL 689

Query: 430 INGL-----MGDAL-RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           +  L     + +A  RF     R  L+ ++ I++ L+ G C+  +    +KLF  M    
Sbjct: 690 VQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRG 749

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
             P  +T   L  G+   G    A  L  +M   G  P   T++AI+ GL K
Sbjct: 750 NVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRK 801



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 162/367 (44%), Gaps = 31/367 (8%)

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G + +V T++ L+N    E    + + ++  M++  + P+   ++ILI    +  R  +
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP-NVISYSILI 360
                     +  K D+  F  ++D     G   +A + +  M+  GF+P +   ++ ++
Sbjct: 173 AVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
           + L +  R+ EA  +FGQ+      P  + Y+++IDG  K+G  ++   + DNM+ +   
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           P  V   +L+N L                              C+        +LF +M 
Sbjct: 293 PTEVTYGILVNSL------------------------------CKAGTLERAEELFRVMA 322

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
               +P+ + +T LI G A  G +  A  LF +M++ G  PDVIT++ +I GL K  N  
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
                F+ M R G  P++  Y  ++  L K   +  A ++   +   G  PD +TY  ++
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLL 442

Query: 601 CGYCSLN 607
            G+C L 
Sbjct: 443 DGFCKLG 449



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 9/189 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ L       G++D +V +F  M   G   +PD      +++ L+    +    K    
Sbjct: 616 YTALCTGLCYQGQVDRAVSLFQEMVRQGG--APDAAAYCCIINGLIKGKKLEDACKFFDE 673

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRG-FVPNIVTCNKILKRLCING 227
           M GKG       Y  L+  L   G ++ AFH    ++ RG  V +++  + ++   C   
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKAL 733

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  LF+ ++  G  P  VT ++L +   +  K EKA +L   M      P    ++
Sbjct: 734 KVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFT 793

Query: 288 ILIDGLFKA 296
            ++DGL K+
Sbjct: 794 AILDGLRKS 802



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 5/176 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  + R         Y  +I   ++  K++++ + F  M   G   +      L+  L  
Sbjct: 636 FQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH 695

Query: 160 SNSVGQYYKLCRAMRGKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           + +V + +     M  +G       +Y+ L++G  +   ++ A  +   +I RG VP  V
Sbjct: 696 AGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAV 755

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           T   +   L  +G+   A  L   +   G  P+  TF+ +++   K  +  K  +L
Sbjct: 756 TSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 216/402 (53%), Gaps = 5/402 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P++ T N ++   C   ++G A S+   LL +G +P+  TF+TLI   C E K+ +A
Sbjct: 180 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 239

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L++  +     PD++ Y  L++GL K G       LL + + +  + +V+ +++++D+
Sbjct: 240 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDS 299

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                 V  A   +  M+  G  P++ +Y+ LI  LC          L  +++  ++ P+
Sbjct: 300 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 359

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++ +S+++D  CK G +     + D MIKRG++PD V  + L++G      M +A++ F 
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 419

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             V    +PN+  +N L++G C+++R    + L   M +  +  D +T+  LI G+   G
Sbjct: 420 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 479

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  AI LF +M+  G  PD++TY  ++  L K  +++  + + K +E + +  DI +YN
Sbjct: 480 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 539

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + ++ + +   L+AA  LF  L+ +GL+PD+ TYN +I G C
Sbjct: 540 IAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLC 581



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 240/489 (49%), Gaps = 34/489 (6%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + LI ++  + ++  +  + A +  +G          L+  L     +G+   L     G
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF      Y  LMNGL + G    A  + R ++Q+   PN++  N I+  LC + Q+  
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 308

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A +LF  ++  G  P++ T+++LI+A C   + +    L N M+   ++P+++++S ++D
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 368

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G +   ++++   + RG++ DVV ++++MD +    ++  AV+ +D M++ G +P
Sbjct: 369 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 428

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV SY+ILI G CQ  R+ +A GL  Q+ ++ L    +TY++LI G C  G+L+   +L+
Sbjct: 429 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 488

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             M+  G                               IP+L  +  L+D  C+     +
Sbjct: 489 HEMVASG------------------------------QIPDLVTYRILLDYLCKNHHLAE 518

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            + L   +   N+  D++ + + I G+   G L +A  LF  +  +GL PDV TY+ +IH
Sbjct: 519 AMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIH 578

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL K   +     +F+ M+ NG + D  IYN ++   ++      A +L  ++   G   
Sbjct: 579 GLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSA 638

Query: 592 DIITYNTII 600
           D+ T   I+
Sbjct: 639 DVSTTTLIV 647



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 216/417 (51%), Gaps = 5/417 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +  ++++ G  P+  T N +++ LC+ G+IG A  LFD  +  G +P+VVT+ TL+N
Sbjct: 204 AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMN 263

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK      A +L   M++ +  P++I Y+ +ID L K  ++ E   L    + +G+  
Sbjct: 264 GLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP 323

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D+  ++S++ A   + +        + M+N   +PNV+ +S ++  LC++G +  A  + 
Sbjct: 324 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 383

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
             ++ R +EP ++TY++L+DG C   ++ +   ++D M+ +G  P+    ++LING    
Sbjct: 384 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 443

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             M  A+    Q     LI +   +NTL+ G C + R    + LF  M      PD++T+
Sbjct: 444 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 503

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L+  +     L+ A++L   +    L  D++ Y+  I G+ +   +     +F  +  
Sbjct: 504 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 563

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            G+ PD+  YN++++ L K   LD A KLF ++ + G   D   YNTII G+   N 
Sbjct: 564 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNE 620



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 9/310 (2%)

Query: 307 LTALDRGLKL----DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           L++ +R L +      V F+ ++ +   +      +    +M + G  P+V + +ILI  
Sbjct: 135 LSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINS 194

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C   RL  A  +  ++L    +P   T+++LI G C  GK+ +   L+D  I  G +PD
Sbjct: 195 FCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPD 254

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V    L+NGL        A+R     V+    PN+  +NT++D  C+ ++ T+   LF 
Sbjct: 255 VVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFS 314

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I PD+ T+  LI  + +         L  +M+   + P+V+ +S ++  L K  
Sbjct: 315 EMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 374

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I++   +  +M + GV PD+  Y  L++       +D A+K+F  +  +G  P++ +YN
Sbjct: 375 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 434

Query: 598 TIICGYCSLN 607
            +I GYC + 
Sbjct: 435 ILINGYCQIQ 444



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 153/340 (45%), Gaps = 45/340 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           +S +++   + G I  + ++   M   G+   PD+V    LM      + + +  K+   
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIKRGV--EPDVVTYTALMDGHCLRSEMDEAVKVFDT 420

Query: 173 MRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           M  KG CV     Y  L+NG  +   ++ A  +  Q+  +G + + VT N ++  LC  G
Sbjct: 421 MVHKG-CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 479

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ +A +LF  ++  G  P++VT+  L++  CK   L +A  L   +   +L  D+++Y+
Sbjct: 480 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 539

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I IDG+ +AG L+   +L      +GL+                                
Sbjct: 540 IAIDGMCRAGELEAARDLFSNLSSKGLQ-------------------------------- 567

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              P+V +Y+I+I GLC++G L EA  LF ++           Y+++I GF +S +    
Sbjct: 568 ---PDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGA 624

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
             L   M+  G   D    +L++  L  D L   F+ +R+
Sbjct: 625 TQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERLRL 664



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 5/208 (2%)

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNT 458
           L D  S ++ M+     P  V  + L+  +         L    Q     + P+++  N 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L++  C L+R      +   +     +PD  T   LIRG+  +G +  A+ LF + +  G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             PDV+TY  +++GL K  N S  + + + M +    P++  YN +++ L K+  +  A 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSL 606
            LF ++  +G+ PDI TYN++I   C+L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNL 338



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%)

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D +  F  M   +  P  +  T L+  IA     S+ + L  QM   G+ PDV T + +I
Sbjct: 133 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 192

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +     + +     +   + + G  PD   +N L+  L  E  +  AL LF +    G +
Sbjct: 193 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 252

Query: 591 PDIITYNTIICGYCSLNS 608
           PD++TY T++ G C + +
Sbjct: 253 PDVVTYGTLMNGLCKVGN 270


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 148/559 (26%), Positives = 274/559 (49%), Gaps = 55/559 (9%)

Query: 104 FRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSD--MGIYLSPDL-----VQ 151
           FR      GC+     ++ L++ +VR  +  ++   FA +S    G  ++P+L     V 
Sbjct: 106 FRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVL 165

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFCV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
           R +    D +     +   R  +    C+ Y  LM GL ++  +++A  +  ++ + G  
Sbjct: 166 RSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQ 225

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLL-VGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           P++V  N +L      G+      ++D L+   G +PN+ T++ +++  CK  + ++  +
Sbjct: 226 PDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGE 285

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           ++  M+  +L PD+I Y ILI GL ++G +     +    +  GL +D  +++S++  + 
Sbjct: 286 VWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFC 345

Query: 330 GIGDVGRA--------------VQTYDRMLNGGF---------------------LPNVI 354
             G V  A              ++TY+ M+ G F                     +P+ +
Sbjct: 346 QAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTV 405

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           ++  LI GLCQ G   +A  +F +  +   +  + +YSS+I+G C  G+L D   +Y+ M
Sbjct: 406 TFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            K G KP++ + + LI+G        DA+R + +       P +  +NTL+DG C+ ++ 
Sbjct: 466 DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKY 525

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +   +   M      PD+ T+  LIRG+ S   +  A+ ++ Q+L +GL  DV+ ++ +
Sbjct: 526 QEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNIL 585

Query: 530 IHGLFKGKNISVGLHMFKLM-ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           IHGL     +   LH+F  M E+    P++  YN L++ L +   +D A  L+  +T+ G
Sbjct: 586 IHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG 645

Query: 589 LEPDIITYNTIICGYCSLN 607
           LEPDII+YNT I G CS +
Sbjct: 646 LEPDIISYNTRIKGLCSCD 664



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 204/399 (51%), Gaps = 10/399 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++GL R G ++ A  ++ ++I+ G V +    N ++K  C  G++  A   +D  
Sbjct: 301 TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA 360

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL--VPDLIIYSILIDGLFKAG 297
              G + N+ T++ +I        +++A +L++L+ E D+  +PD + +  LI GL + G
Sbjct: 361 GFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLL-EKDVACIPDTVTFGTLIHGLCQNG 418

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
              +   +   A   G +LDV  +SS+++    +G +  AV+ Y++M   G  PN   Y+
Sbjct: 419 FANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYN 478

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G CQ  R  +A  ++ ++      P+++TY++LIDG CK+ K ++  S+   M++ 
Sbjct: 479 ALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN 538

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G  PD      LI GL     + DAL  + Q +   L  ++ + N L+ G C   +  + 
Sbjct: 539 GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEA 598

Query: 473 VKLFMLMG-MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
           + +F  M    N  P+++T+  L+ G+   G +  A  L+  + + GL PD+I+Y+  I 
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIK 658

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           GL     I  G+ +   +   G+ P +  +N+L+  +IK
Sbjct: 659 GLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 218/470 (46%), Gaps = 28/470 (5%)

Query: 85  HVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
            V+DK+V   G   N               Y+ +++   + G+  E  E++  M  +   
Sbjct: 249 RVWDKLVKDPGARPNL------------ATYNVMLDGLCKFGRFKEVGEVWERM--VANN 294

Query: 145 LSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAF 198
           L PD++    L+  L  S  V    ++   +   G  +    Y  L+ G  + G ++ A+
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAW 354

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL-VGPKPNVVTFSTLINA 257
                    G   N+ T N ++K L  +G +  A  L+D+L   V   P+ VTF TLI+ 
Sbjct: 355 KFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHG 413

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
            C+     KAF ++          D+  YS +I+GL   GRL +  ++       G K +
Sbjct: 414 LCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPN 473

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
             ++++++  +  +     AV+ Y +M + G  P VI+Y+ LI GLC+  +  EA  +  
Sbjct: 474 SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAR 533

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
           +++     P + TY SLI G     K+ D  S++  ++ +GLK D ++ ++LI+GL    
Sbjct: 534 EMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG 593

Query: 434 -MGDALRFFFQ-SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
            + +AL  F     +    PNL  +NTLMDG            L+  +    ++PD+I++
Sbjct: 594 KVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
              I+G+ S   +   I L  ++L RG+ P VIT++ ++  + K   I V
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 177/411 (43%), Gaps = 88/411 (21%)

Query: 70  LIHVLLQSDMRDVASHVFDKMV------------------IQFGKTYNFFRLFRDSLGDF 111
           LIH L +S   D A+ V+ +++                   Q G+    ++ F DS G  
Sbjct: 305 LIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFA 363

Query: 112 GC----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY- 166
           G      Y+ +I+     G +DE++E++            DL+++ ++C+ D+ + G   
Sbjct: 364 GLRNLRTYNIMIKGLFDSGMVDEAIELW------------DLLEKDVACIPDTVTFGTLI 411

Query: 167 YKLCR-AMRGKGFCVYE---------------FLMNGLLRKGVIENAFHMHRQVIQRGFV 210
           + LC+     K F ++E                ++NGL   G + +A  ++ ++ + G  
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN    N ++   C   +  +A  ++  +   G  P V+T++TLI+  CK  K ++A  +
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSV 531

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV------------ 318
              M+E    PD+  Y  LI GLF   ++ +   +    L +GLK+DV            
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCS 591

Query: 319 ------------------------VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
                                   V ++++MD     G + +A   +  +   G  P++I
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           SY+  IKGLC   R+ E   L  +VL R + P+++T++ L+    K G ++
Sbjct: 652 SYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 254/492 (51%), Gaps = 13/492 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ + + G ++++ ++F  M   GI   PDLV    ++  L  + ++G+     R 
Sbjct: 226 YTTVIDCFFKEGDVNKACDLFKEMVQRGI--PPDLVTYSSVVHALCKARAMGKAEAFLRQ 283

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  L+ G    G  + A  + +++ +   +P++VT N ++  LC  G+
Sbjct: 284 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGK 343

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  +FD + + G  P+V ++  ++N +  +  L     L++LM+   + PD+  +S+
Sbjct: 344 IKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSV 403

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI      G L +   +     D G+K DVV +++V+ A   IG +  A++ +++M++ G
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG 463

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+  +Y  LI+G C  G L++A  L  +++   +   ++ +SS+I+  CK G++ D  
Sbjct: 464 VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQ 523

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +++D  +  G  PDAVV S+L++G      M  ALR F   V   + PN+ ++ TL++G 
Sbjct: 524 NIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGY 583

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C++ R  + + LF  M    IKP  I + ++I G+   G    A + F +M + G+  + 
Sbjct: 584 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINK 643

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ ++ G FK +     + +FK +    V  DI   N ++  + +   ++ A  LF  
Sbjct: 644 CTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 703

Query: 584 LTDRGLEPDIIT 595
           ++  GL P ++T
Sbjct: 704 ISRSGLVPCVVT 715



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/535 (25%), Positives = 256/535 (47%), Gaps = 53/535 (9%)

Query: 118 LIENYVRIGKIDESVEIFAYMS-DMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAM- 173
           L++ +    + DE+++I  + + ++G    PD+     L+  L D    GQ   L R M 
Sbjct: 156 LLKGFCEAKRTDEALDILLHRTPELGCV--PDVFSYSILLKSLCDQGKSGQADDLLRMMA 213

Query: 174 RGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            G   C      Y  +++   ++G +  A  + ++++QRG  P++VT + ++  LC    
Sbjct: 214 EGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 273

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +G A +    ++  G  P+  T++ LI  +    + ++A +++  M    ++PD++  ++
Sbjct: 274 MGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNM 333

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+  L K G++KE  ++  T   +G   DV  +  +++ Y   G +      +D ML  G
Sbjct: 334 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDG 393

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++ ++S+LIK     G L +A  +F ++    ++P ++TY+++I   C+ GK+ D  
Sbjct: 394 IAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAM 453

Query: 409 SLYDNMIKRGLKPDAVVCSLLING----------------LMGDALRF---FFQSVRMTL 449
             ++ MI +G+ PD      LI G                +M + +R    FF S+   L
Sbjct: 454 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNL 513

Query: 450 I---------------------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                                 P+  +++ LMDG C + +    +++F  M    I+P+V
Sbjct: 514 CKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 573

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF-KGKNISVGLHMFK 547
           + +  L+ G    G +   + LF +ML++G+ P  I Y+ II GLF  G+ +   +  F 
Sbjct: 574 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVK-FH 632

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            M  +G+A +   YN++L    K    D A+ LF +L    ++ DIIT NT+I G
Sbjct: 633 EMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 687



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 16/290 (5%)

Query: 337 AVQTYDRMLNGGFLPNVIS-----YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           AV  ++R  +    P V+S     Y+IL+    +  R   A   FGQ+L   L   ++  
Sbjct: 94  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 153

Query: 392 SSLIDGFCKSGKLRDGFS-LYDNMIKRGLKPDAVVCSLLI--------NGLMGDALRFFF 442
           + L+ GFC++ +  +    L     + G  PD    S+L+        +G   D LR   
Sbjct: 154 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 213

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +       P++  + T++D   +         LF  M    I PD++T++ ++  +    
Sbjct: 214 EG-GAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR 272

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++  A     QM+ +G+ PD  TY+ +I+G          + +FK M R+ + PD+   N
Sbjct: 273 AMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLN 332

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
           +L+  L K   +  A  +F  +  +G  PD+ +Y  ++ GY +   CL+D
Sbjct: 333 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYAT-KGCLVD 381


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 222/412 (53%), Gaps = 5/412 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +   + + G  PN VT + +L  L    +I +A  LFD ++ +G +P+V+T+ST+IN
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK      A QL   M E    P++++YS +ID L K   + E  E L   ++RG+  
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV +SS++  +  +G    A   + +M+    +P+ ++++IL+ GL ++G ++EA  +F
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----N 431
             ++ + +EP++ TY++L+DG+C   ++ +   L++ M+++G  P     ++LI     +
Sbjct: 211 ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKS 270

Query: 432 GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           G + +A     +     L P+   ++TLM G C+  R  D  KL   M  Y + PD++T+
Sbjct: 271 GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTY 330

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           ++++ G+  QG L  A  L   M +  + P++  Y+ +I G+     +     +F  +  
Sbjct: 331 SIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFV 390

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            G+ PD+  Y V+++ L+K    + A +LF  +   G  P+  TYN II G+
Sbjct: 391 KGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGF 442



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 222/414 (53%), Gaps = 9/414 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NGL + G    A  + +++ ++G  PN+V  + I+  LC +  I  A      +
Sbjct: 84  TYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEM 143

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PNVVT+S++++ FC   +  +A  L+  M+E +++PD + ++IL+DGL K G +
Sbjct: 144 VNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMI 203

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   +  T +++G++ +V  ++++MD Y     +  A + ++ M+  G  P+V SY+IL
Sbjct: 204 LEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNIL 263

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKG C+ GR+ EA GL  ++  + L P  +TYS+L+ GFC+ G+ +D   L + M   GL
Sbjct: 264 IKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGL 323

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD +  S++++GL     + +A           + PN+FI+  L+ G C   +     +
Sbjct: 324 LPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARE 383

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  + +  I+PDV+T+TV+I G+   G  + A  LF  M   G  P+  TY+ II G  
Sbjct: 384 LFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFL 443

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +  + S    + + M   G + D + + +L ++  +    D  + LF   + +G
Sbjct: 444 RNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR----DEIISLFMHGSSQG 493



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 219/422 (51%), Gaps = 5/422 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL  K  I +A  +  ++++ G+ P+++T + I+  LC  G    A  L   +
Sbjct: 49  TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM 108

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KPNVV +ST+I++ CK+  + +A +  + M+   + P+++ YS ++ G    GR 
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRS 168

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   L    ++R +  D V F+ ++D     G +  A   ++ M+  G  PNV +Y+ L
Sbjct: 169 NEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNAL 228

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G C Q ++ EA  LF  ++ +   PS+ +Y+ LI G CKSG++ +   L   M  + L
Sbjct: 229 MDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288

Query: 420 KPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V  S L+ G        DA +   +     L+P+L  ++ ++DG C+     +  +
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFE 348

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M    I+P++  +T+LI+G+ + G L +A  LF  +  +G+ PDV+TY+ +I GL 
Sbjct: 349 LLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLL 408

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           KG   +    +F+ M  +G  P+   YNV++   ++  +   A +L  ++  RG   D  
Sbjct: 409 KGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSS 468

Query: 595 TY 596
           T+
Sbjct: 469 TF 470



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 194/368 (52%), Gaps = 7/368 (1%)

Query: 245 KPNVVTFSTLINAFC--KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           +P+V T + LIN FC         AF +   M ++ L P+ + +S L++GL    ++ + 
Sbjct: 7   RPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDA 66

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            +L    +  G + DV+ +S++++    +G    A+Q   +M   G  PNV+ YS +I  
Sbjct: 67  VKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDS 126

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC+   + EA     +++ R + P+++TYSS++ GFC  G+  +  SL+  M++R + PD
Sbjct: 127 LCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPD 186

Query: 423 AVVCSLLINGLMGDALRFFFQSVRMTLI-----PNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  ++L++GL  + +    Q V  T+I     PN+  +N LMDG C   +  +  KLF 
Sbjct: 187 TVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFN 246

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
           +M      P V ++ +LI+G    G +  A  L  +M  + LTPD +TYS ++ G  +  
Sbjct: 247 IMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDG 306

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
                  + + M   G+ PD+  Y+++L+ L K+ +LD A +L   + +  +EP+I  Y 
Sbjct: 307 RPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYT 366

Query: 598 TIICGYCS 605
            +I G C+
Sbjct: 367 ILIQGMCN 374



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 129/232 (55%), Gaps = 7/232 (3%)

Query: 381 IRRLEPSLLTYSSLIDGFCKSGK--LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG--- 435
           +  + P + T + LI+ FC S        FS+  NM K GL+P+ V  S L+NGL     
Sbjct: 3   LSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAK 62

Query: 436 --DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             DA++ F + V+M   P++  ++T+++G C++   T  ++L   M     KP+V+ ++ 
Sbjct: 63  IIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYST 122

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I  +     ++ A+    +M+ RG++P+V+TYS+I+HG       +    +FK M    
Sbjct: 123 IIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERN 182

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           V PD   +N+L++ L KE  +  A  +F  + ++G+EP++ TYN ++ GYCS
Sbjct: 183 VMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCS 234



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 95/158 (60%), Gaps = 2/158 (1%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI--KPDVITHTVLIRGIASQGSLSSAI 508
           P+++    L++  C            +L  M+ +  +P+ +T + L+ G++S+  +  A+
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            LF +M+K G  PDVITYS II+GL K  + ++ + + K ME  G  P++ +Y+ +++ L
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            K+  +  A++   ++ +RG+ P+++TY++I+ G+C+L
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNL 165



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 33/130 (25%)

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M + NI+PDV T T+LI                          +   +S   H  F    
Sbjct: 1   MDLSNIRPDVYTLTILI--------------------------NCFCHSNHDHFHFA--- 31

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
            SV  +MFKL    G+ P+   ++ LLN L  +  +  A+KLF ++   G EPD+ITY+T
Sbjct: 32  FSVLGNMFKL----GLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYST 87

Query: 599 IICGYCSLNS 608
           II G C + S
Sbjct: 88  IINGLCKMGS 97


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 240/496 (48%), Gaps = 15/496 (3%)

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
           NY  +  + ++V  F  +  +GI   P +V   +L+  LV          LC+ M     
Sbjct: 43  NYNNLHSVADAVASFNQL--LGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNI 100

Query: 179 CVYEFLMNGLLRKGVIENAFHMH------RQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
               + +  L+      N  H+H       ++ + G  P  VT   +L  LC   +I +A
Sbjct: 101 RPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDA 160

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             LFD +  +G  P+++T++T+I   CK      A QL   M E    PD++ Y+ +ID 
Sbjct: 161 VKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDS 220

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L K  R  E        +D+G+  +VV +SS++  +  +G +  A   + +M+    +PN
Sbjct: 221 LCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPN 280

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
            ++++IL+ GLC++G ++EA  +F  +    +EP   TYS+L+DG+C   ++ +   L+D
Sbjct: 281 TVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFD 340

Query: 413 NMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M+ +G  P   V ++LING      + +A     +     L P+   ++TLM G C+  
Sbjct: 341 IMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAG 400

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R     KLF  M  Y + PD IT+++L+ G+   G L  A  L   M +  + P +  Y+
Sbjct: 401 RPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYN 460

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I G+     +     +F  +   G+ P +  Y V+++ L+KE   + A ++F ++   
Sbjct: 461 ILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVN 520

Query: 588 GLEPDIITYNTIICGY 603
           G  P+  TYN  I G+
Sbjct: 521 GCLPNSCTYNVAIQGF 536



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 261/540 (48%), Gaps = 50/540 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQL---IHVLLQSDMRDVASHVFDKMVI 92
           N +L +L+K  + +  I   K        PN+  L   I+ L  S+ RD     F  +  
Sbjct: 73  NKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSN-RDHVHFAFSAL-- 129

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
             GK      +F+  L      +  L+       KI ++V++F  +  MG   +P L+  
Sbjct: 130 --GK------MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMG--FAPSLI-- 177

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                                       Y  ++ GL + G   NA  + +++ ++G  P+
Sbjct: 178 ---------------------------TYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPD 210

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +V  N ++  LC + +   A   F  ++  G  PNVVT+S++++ FC   +L +A  L+ 
Sbjct: 211 VVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFK 270

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M+  +++P+ + ++IL+DGL K G + E   +     + G++ D   +S++MD Y    
Sbjct: 271 QMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQS 330

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
            +  A + +D M+  GF P+V  Y+ILI G C+  RL EA  L  ++  R L P  +TYS
Sbjct: 331 QMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYS 390

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM 447
           +L+ GFC++G+ +    L+  M   GL PD++  S+L++GL     + +A R        
Sbjct: 391 TLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQES 450

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            + P++ I+N L+ G C   +     +LF  + +  I+P V+T+TV+I G+  +G  + A
Sbjct: 451 KIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEA 510

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             +F +M+  G  P+  TY+  I G  +  + S  + + + M   G + D + + +LL++
Sbjct: 511 CEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 230/462 (49%), Gaps = 17/462 (3%)

Query: 153 LMSCLVDSN---------SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQ 203
           L++CL  SN         ++G+ +KL           +  L+NGL  K  I +A  +  +
Sbjct: 110 LINCLCHSNRDHVHFAFSALGKMFKLGLQ---PTHVTFGTLLNGLCSKAKIIDAVKLFDE 166

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           + + GF P+++T   I+K LC  G   NA  L   +   G KP+VV ++T+I++ CK+ +
Sbjct: 167 IGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRR 226

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
             +A   ++ M++  + P+++ YS ++ G    G+L E   L    + R +  + V F+ 
Sbjct: 227 ANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTI 286

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D     G +  A + ++ M   G  P+  +YS L+ G C Q ++ EA  LF  ++ + 
Sbjct: 287 LVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKG 346

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----AL 438
             PS+  Y+ LI+G CKS +L +  +L   M  R L PD V  S L+ G         A 
Sbjct: 347 FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQ 406

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           + F +     L+P+   ++ L+DG C+     +  +L   M    I+P +  + +LI+G+
Sbjct: 407 KLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGM 466

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
            + G L +A  LF  +  +G+ P V+TY+ +I GL K    +    MF+ M  NG  P+ 
Sbjct: 467 CNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNS 526

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             YNV +   ++  +   A++L  ++  RG   D  T+  ++
Sbjct: 527 CTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 199/404 (49%), Gaps = 7/404 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK--LEKA 267
           +P +V  NK+L  L          SL   + L   +PNV T + LIN  C   +  +  A
Sbjct: 66  LPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFA 125

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           F     M ++ L P  + +  L++GL    ++ +  +L       G    ++ +++++  
Sbjct: 126 FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKG 185

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
              IG    A+Q   +M   G  P+V++Y+ +I  LC+  R  EA   F +++ + + P+
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFF 442
           ++TYSS++ GFC  G+L +  SL+  MI R + P+ V  ++L++GL  +     A R F 
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFE 305

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                 + P+ + ++ LMDG C   +  +  KLF +M      P V  + +LI G     
Sbjct: 306 MMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSR 365

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L+ A  L  +M  R LTPD +TYS ++ G  +     V   +FK M   G+ PD   Y+
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYS 425

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +LL+ L K  +LD A +L   + +  +EP I  YN +I G C+ 
Sbjct: 426 ILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNF 469



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 186/381 (48%), Gaps = 38/381 (9%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A + F+ LL + P P VV F+ L+ +  K+        L   M   ++ P++   +I
Sbjct: 50  VADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTI 109

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+ L  + R                  D V F     A+  +G          +M   G
Sbjct: 110 LINCLCHSNR------------------DHVHF-----AFSALG----------KMFKLG 136

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P  +++  L+ GLC + ++++A  LF ++      PSL+TY+++I G CK G   +  
Sbjct: 137 LQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNAL 196

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L   M ++G KPD V  + +I+ L  D     A+ FF + V   + PN+  +++++ G 
Sbjct: 197 QLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGF 256

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C L +  +   LF  M   N+ P+ +T T+L+ G+  +G +  A  +F  M + G+ PD 
Sbjct: 257 CNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDA 316

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TYSA++ G      +     +F +M   G AP + +YN+L+N   K   L+ A  L  +
Sbjct: 317 YTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSE 376

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           + DR L PD +TY+T++ G+C
Sbjct: 377 MYDRDLTPDTVTYSTLMQGFC 397



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 38/262 (14%)

Query: 352 NVISYSILIKGLCQQ----GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           N+   SI   G C        + +A   F Q+L  R  P ++ ++ L+    K       
Sbjct: 29  NISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTV 88

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMG---DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
            SL   M    ++P+    ++LIN L     D + F F ++                   
Sbjct: 89  ISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALG------------------ 130

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
                    K+F L     ++P  +T   L+ G+ S+  +  A+ LF ++ K G  P +I
Sbjct: 131 ---------KMFKL----GLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLI 177

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+ II GL K  + +  L + K ME  G  PD+  YN +++ L K+   + A+  F ++
Sbjct: 178 TYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEM 237

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
            D+G+ P+++TY++I+ G+C+L
Sbjct: 238 VDQGIPPNVVTYSSILHGFCNL 259


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 171/582 (29%), Positives = 275/582 (47%), Gaps = 70/582 (12%)

Query: 85  HVFDKMVIQFGKTYNFFRLFRDSLGDF---GCD-----YSFLIENYVRIGKIDESVEIFA 136
           +V+  +V    +  +F R  R+ +G     GCD     Y+  I    +  ++ E+VEI  
Sbjct: 216 YVYTAVVRSLCELKDFIRA-REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKN 274

Query: 137 YMS------DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMN 186
            +S      D+G Y +  LV  L  C V+    G+  ++   M   GF   E     L++
Sbjct: 275 LLSYKGLRADVGTYCT--LVLGL--CKVEEFEAGE--EMMNEMIEFGFVPSEAAVSNLVD 328

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           GL +KG I +AF +  +V + G  P++   N ++  +C +G++  A SLF+ +   G  P
Sbjct: 329 GLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFP 388

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           N VT+S LI++FCK  KL+ A      M E+ +   +  YS LI G  K G+L+    L 
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              +  GLK +VV+++S++  Y   G++  A + Y  M   G  PN  +++ LI GLC  
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHA 508

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
            R+ EA  LFG+++   + P+ +TY+ LI+G CK G     F L D M+++GL PD    
Sbjct: 509 NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTY 568

Query: 427 SLLINGL-----MGDALRFF--FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             LI+GL     + +A  F    Q  +  L  N   F+ L+ G C+  R  D +     M
Sbjct: 569 RPLISGLCSTGRVSEAREFMNDLQGEQQKL--NEMCFSALLHGYCKEGRLDDALDACREM 626

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               +  D++ ++VLI GI  Q    S I L  QM  +GL PD + Y+ +I    K  N+
Sbjct: 627 LGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNL 686

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIK----------------------------- 570
            +   ++ +M   G  P++  Y  L+N L K                             
Sbjct: 687 KMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACF 746

Query: 571 ------ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
                 E N++ A++L   L + G   + +TYN +I G+C L
Sbjct: 747 LDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKL 787



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 241/503 (47%), Gaps = 10/503 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+++ + GK+D ++     M+++GI  +      L+S       +     L   M 
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      +Y  L++G  ++G + NAF ++ ++  +G  PN  T   ++  LC   ++ 
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ LF  ++     PN VT++ LI   CKE    +AF+L + M+E  LVPD   Y  LI
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL   GR+ E  E +        KL+ + FS+++  Y   G +  A+     ML  G  
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVA 632

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +++ YS+LI G+ +Q        L  Q+  + L P  + Y+++ID   K+G L+  F L
Sbjct: 633 MDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGL 692

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +D M+  G  P+ V  + LINGL     M  A     + +    +PN   +   +D    
Sbjct: 693 WDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTS 752

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                  ++L  ++ +     + +T+ +LIRG    G +  A  +   M+  G++PD I+
Sbjct: 753 EGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCIS 811

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           YS II+   +  ++   + +++ M   GV PD   YN L+        L  A +L   + 
Sbjct: 812 YSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMM 871

Query: 586 DRGLEPDIITYNTIICGYCSLNS 608
            RG++P+  TYN++I G C ++S
Sbjct: 872 RRGVKPNRATYNSLIHGTCLMSS 894



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 159/619 (25%), Positives = 273/619 (44%), Gaps = 114/619 (18%)

Query: 63  SSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS------ 116
           S+ +   LIH L+QS++   AS +   ++++       F  F DS     C++S      
Sbjct: 92  STTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRK--CNFSTTLGFD 149

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
            LI+ YV+  +  + + +   M D GI   P +                     R + G 
Sbjct: 150 LLIQTYVQNRRELDGLVVVRLMMDCGIL--PQI---------------------RTLSG- 185

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN------------------------ 212
                  ++NGL+R      A H+  +++  G  P+                        
Sbjct: 186 -------VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVI 238

Query: 213 -----------IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
                      + T N  ++ LC N ++  A  + ++L   G + +V T+ TL+   CK 
Sbjct: 239 GRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKV 298

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            + E   ++ N M+E   VP     S L+DGL K G +    +L+      G+   + V+
Sbjct: 299 EEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVY 358

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++++    G +  A   ++ M + G  PN ++YSILI   C++G+L  A    G++  
Sbjct: 359 NALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
             ++ ++  YSSLI G CK GKLR   SL+D MI  GLKP+ V+ + LI+G      + +
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A R + +     + PN + F  L+ G C   R  +  KLF  M  +N+ P+ +T+ VLI 
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITY------------------------------ 526
           G   +G+   A  L  +M+++GL PD  TY                              
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598

Query: 527 -----SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
                SA++HG  K   +   L   + M   GVA D+  Y+VL+  ++++ +  + + L 
Sbjct: 599 NEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLL 658

Query: 582 GQLTDRGLEPDIITYNTII 600
            Q+ D+GL PD + Y T+I
Sbjct: 659 KQMHDQGLRPDNVLYTTMI 677



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 208/409 (50%), Gaps = 5/409 (1%)

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           R ++  G +P I T + +L  L    Q   A  LFD ++  G +P+V  ++ ++ + C+ 
Sbjct: 169 RLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCEL 228

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
               +A ++   M        +  Y++ I GL K  R+ E  E+      +GL+ DV  +
Sbjct: 229 KDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTY 288

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
            +++     + +     +  + M+  GF+P+  + S L+ GL ++G +  A  L  +V  
Sbjct: 289 CTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK 348

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGD 436
             + PSL  Y++LI+  CK GKL +  SL++NM  +GL P+ V  S+LI+     G +  
Sbjct: 349 FGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDV 408

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           AL F  +   + +   ++ +++L+ G C+L +      LF  M    +KP+V+ +T LI 
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G   +G L +A  L+ +M  +G++P+  T++A+I GL     ++    +F  M    V P
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           +   YNVL+    KE N   A +L  ++ ++GL PD  TY  +I G CS
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 188/385 (48%), Gaps = 8/385 (2%)

Query: 231 NASSLFDVLLLVGPKPNVVT---FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           N   LF+  L    K N  T   F  LI  + +  +      +  LMM+  ++P +   S
Sbjct: 125 NPEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLS 184

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +++GL +  + +    L    +  GL+ DV V+++V+ +   + D  RA +   RM + 
Sbjct: 185 GVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESS 244

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G   +V +Y++ I+GLC+  R+ EA  +   +  + L   + TY +L+ G CK  +   G
Sbjct: 245 GCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAG 304

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             + + MI+ G  P     S L++GL     +G A     +  +  + P+LF++N L++ 
Sbjct: 305 EEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+  +  +   LF  MG   + P+ +T+++LI     +G L  A+    +M + G+   
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKAT 424

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V  YS++I G  K   +     +F  M  NG+ P++ IY  L++   KE  L  A +L+ 
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484

Query: 583 QLTDRGLEPDIITYNTIICGYCSLN 607
           ++T +G+ P+  T+  +I G C  N
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHAN 509



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 191/371 (51%), Gaps = 16/371 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LIE + + G    + E+   M + G+       + L+S L  +  V +  +    ++
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G+   + E     L++G  ++G +++A    R+++ RG   ++V C  +L    +  Q  
Sbjct: 593 GEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLV-CYSVLIYGILRQQ-- 649

Query: 231 NASSLFDVLLLV---GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +  S+ D+L  +   G +P+ V ++T+I+A  K   L+ AF L+++M+    +P+++ Y+
Sbjct: 650 DRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYT 709

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI+GL K G + +   L    L      +   ++  +D     G++ +A+Q +D +L G
Sbjct: 710 ALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEG 769

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
            FL N ++Y+ILI+G C+ GR+ EA  +   ++   + P  ++YS++I  +C+ G L++ 
Sbjct: 770 -FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 828

Query: 408 FSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+++M+ RG+ PD V  + LI      G +  A       +R  + PN   +N+L+ G
Sbjct: 829 IKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888

Query: 463 CCRLKRATDTV 473
            C +   + T 
Sbjct: 889 TCLMSSVSSTA 899



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 132/317 (41%), Gaps = 57/317 (17%)

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEAC--------------GLF-------------- 376
           L+  F  +  S+ ILI  L Q      A               GLF              
Sbjct: 85  LHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFST 144

Query: 377 -------------------GQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYD 412
                              G V++R +      P + T S +++G  +  + R    L+D
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 413 NMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLIP---NLFIFNTLMDGCCRLK 467
            ++  GL+PD  V + ++  L  + D +R      RM       ++  +N  + G C+ +
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  + V++  L+    ++ DV T+  L+ G+       +   +  +M++ G  P     S
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++ GL K  NI     +   +++ GVAP + +YN L+N + K+  LD A  LF  +  +
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384

Query: 588 GLEPDIITYNTIICGYC 604
           GL P+ +TY+ +I  +C
Sbjct: 385 GLFPNDVTYSILIDSFC 401


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 241/476 (50%), Gaps = 9/476 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+   + GK++++  +F  +   G+  S      L+  L  +NS     +L   M 
Sbjct: 13  YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  +++   ++G++E A  + +++I+ G VP++VT N ++  LC + ++ 
Sbjct: 73  RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 132

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF+ +  +G  PN  + +T+I   C+++K+++A Q+++ M   D+ PD   Y ILI
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL KAG+L E  +L    LD G+    V ++ V+        +  A++ +  M + G  
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +++ILI   C++G+L EA  L  ++      P ++TYS+LI G C   ++ D   L
Sbjct: 253 PSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            ++M+KR  KP  V  + LI+GL     + +A       V     P++  +NTL+ G CR
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +     +L   M    + P+V+T+T L+ G+     L  A  +F QM   G  P++ T
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           Y+A+I G      +  GL +F  M   G++PD  +Y  L   L K      AL++ 
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 207/407 (50%), Gaps = 5/407 (1%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           +R   P+  +   ++  L   G++ +A +LF  LL  G  P+ V +++LI+  C     +
Sbjct: 3   ERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
            A +L+  M      P  + Y+++ID   K G L+E  +L+   ++ G   DVV +++VM
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           D       V  A+  ++ M   G  PN  S++ +I GLCQQ ++ +AC +F ++  + + 
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIP 182

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P   +Y  LIDG  K+GKL + + L+  M+  G+ P AV  +++I+G+     + +AL  
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F         P+ F FN L+D  C+  +  +  +L   M      PDV+T++ LI G+ S
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
              +  A  L   M+KR   P V+T + +IHGL K   I     +   M  +G +PD+  
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           YN L++   +    + A +L   +  RGL P+++TY  ++ G C  N
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 221/442 (50%), Gaps = 9/442 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++GL + G + +A ++ ++++  G  P+ V    ++  LC+     +A  LF  + 
Sbjct: 13  YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+ VT++ +I+A CK   LE+A  L   M+E   VPD++ Y+ ++DGL K+ R++
Sbjct: 73  RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 132

Query: 301 EGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           E   LL   ++R G   +    ++++        + +A Q +  M      P+  SY IL
Sbjct: 133 EA-LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL 191

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GL + G+L EA  LF ++L   + PS +TY+ +I G C +  L +   L+ +M  +G 
Sbjct: 192 IDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +P     ++LI+     G + +A R   +      +P++  ++TL+ G C + R  D   
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M     KP V+T   LI G+   G +  A  +   M+  G +PDV+TY+ ++HG  
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +         +   M   G+AP++  Y  L++ L K   L  A  +F Q+   G  P++ 
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF 431

Query: 595 TYNTIICGYCSLNSCLIDGYFK 616
           TY  +I G+CS     +DG  K
Sbjct: 432 TYTALILGFCSAGQ--VDGGLK 451



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 166/338 (49%), Gaps = 40/338 (11%)

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M E ++ PD   Y ILIDGL KAG+L +   L                            
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNL---------------------------- 32

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
                  + ++L+ G  P+ ++Y+ LI GLC      +A  LF  +  R   PS +TY+ 
Sbjct: 33  -------FQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 85

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           +ID  CK G L +   L   MI+ G  PD V  + +++GL     + +AL  F +  R+ 
Sbjct: 86  MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 145

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
             PN    NT++ G C+  +     ++F  M   +I PD  ++ +LI G+A  G L+ A 
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAY 205

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            LF +ML  G+TP  +TY+ +IHG+     +   L +FK M   G  P    +N+L++  
Sbjct: 206 KLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            K   LD A +L  ++TD G  PD++TY+T+I G CS+
Sbjct: 266 CKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 188/430 (43%), Gaps = 33/430 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKM-- 90
           N ++  L K++    A+  F        +PN      +I  L Q    D A  VF +M  
Sbjct: 119 NTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178

Query: 91  ----------------VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIG-----KID 129
                           + + GK    ++LF+  L D G   S +  N V  G      +D
Sbjct: 179 KDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRML-DSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLM 185
           E++E+F  M   G   S      L+        + + ++L + M   G       Y  L+
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           +GL     +++A H+   +++R   P +VT N ++  LC  G+I  A  + D ++  G  
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+VVT++TL++  C+  + E+A +L + M+   L P+++ Y+ L+ GL KA RL E   +
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 417

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
                  G   ++  +++++  +   G V   ++ +  M+  G  P+ + Y  L   LC+
Sbjct: 418 FAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCK 477

Query: 366 QGRLVEACGLF--GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
            GR   A  +   G+  +R        Y   +DG  ++GK+        +M++ G  P  
Sbjct: 478 SGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAP 537

Query: 424 VVCSLLINGL 433
             C+ L+ GL
Sbjct: 538 ERCASLVAGL 547



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 26/304 (8%)

Query: 95  GKTYNFFRLFRDSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           GK    FRL +  + D G       YS LI     I ++D++  +   M  +     P +
Sbjct: 269 GKLDEAFRLLK-RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM--VKRQCKPTV 325

Query: 150 VQR--LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQ 203
           V +  L+  L  +  + +  ++  AM   G       Y  L++G  R G  E A  +   
Sbjct: 326 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 385

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           ++ RG  PN+VT   ++  LC   ++  A  +F  +   G  PN+ T++ LI  FC   +
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR-------LKEGNELLLTALDRGLKL 316
           ++   +L+  M+   + PD ++Y  L   L K+GR       L+EG E L     R    
Sbjct: 446 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL-----RSEAW 500

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
              V+   +D  +  G +  A+     M+ GG LP     + L+ GLC+ G+  EA  + 
Sbjct: 501 GDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 560

Query: 377 GQVL 380
            +++
Sbjct: 561 EEIM 564


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 262/554 (47%), Gaps = 55/554 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   ++NY R GK+ E+V+ F  M       S      +M+ LV+     Q +K+   MR
Sbjct: 79  YIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMR 138

Query: 175 GKG--------------FC-------------------------VYEFLMNGLLRKGVIE 195
            +G              FC                          Y  ++ GL   G  +
Sbjct: 139 DRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHD 198

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           +A  +  +++ R   P++V  NK++  LC  G +  +  L   +L  G  PN+ TF+  +
Sbjct: 199 HARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFV 258

Query: 256 NAFCKEAKLEKAF---------QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
              C+E  L++A          +    M+     PD + Y+ +IDG  K G +++ N +L
Sbjct: 259 QGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVL 318

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
             A+ +G K D   + S+++ +   GD  RA+  +   L  G  P+++ Y+ LIKGL QQ
Sbjct: 319 KDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQ 378

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G ++ A  L  ++      P++ TY+ +I+G CK G + D   L D+ I +G  PD    
Sbjct: 379 GLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTY 438

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + LI+G      +  A     +     + P++  +NTL++G C+  ++ + +++F  M  
Sbjct: 439 NTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEE 498

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
               P++IT+ +++  +     ++ A+ L  +M  +GL PDV+++  +  G  K  +I  
Sbjct: 499 KGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDG 558

Query: 542 GLHMFKLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              +F+ ME+   V    A YN++++   ++ N++ A+KLF  + + G +PD  TY  +I
Sbjct: 559 AYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVI 618

Query: 601 CGYCSLNSCLIDGY 614
            G+C + + +  GY
Sbjct: 619 DGFCKMGN-ITQGY 631



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 142/567 (25%), Positives = 252/567 (44%), Gaps = 69/567 (12%)

Query: 69  QLIHVLLQSDMRDVASHVFD-----KMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFL 118
           Q   V ++   R V S V+      K   +  + Y   RL R+ + + GCD     Y  +
Sbjct: 129 QAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRN-MPELGCDSNAVAYCTV 187

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGK 176
           +      G+ D + E+F  M  +   L PD+V   +L+  L     V +  +L   +  +
Sbjct: 188 VAGLYDSGEHDHARELFDEM--LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKR 245

Query: 177 GFCVYEFLMN----GLLRKGVIENAFHMHR---------QVIQRGFVPNIVTCNKILKRL 223
           G C   F  N    GL R+G ++ A    R         +++  GF P+ +T N I+   
Sbjct: 246 GVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGY 305

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C  G + +A+ +    +  G KP+  T+ +LIN FCK+   ++A  ++   +   L P +
Sbjct: 306 CKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSI 365

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           ++Y+ LI GL + G       L+L AL                            Q  + 
Sbjct: 366 VLYNTLIKGLSQQG-------LILPAL----------------------------QLMNE 390

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M   G LPN+ +Y+++I GLC+ G + +A  L    + +   P + TY++LIDG+CK  K
Sbjct: 391 MAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLK 450

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNT 458
           L     + + M  +G+ PD +  + L+NGL       + +  F         PN+  +N 
Sbjct: 451 LDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNI 510

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR- 517
           ++D  C+ K+  + V L   M    +KPDV++   L  G    G +  A  LF +M K+ 
Sbjct: 511 IVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQY 570

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            +     TY+ I+    +  N+++ + +F +M+ +G  PD   Y V+++   K  N+   
Sbjct: 571 DVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQG 630

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
            K   +  ++   P + T+  ++   C
Sbjct: 631 YKFLLENMEKRFIPSLTTFGRVLNCLC 657



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 133/343 (38%), Gaps = 85/343 (24%)

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS--------------------------- 387
           +Y   +K   ++G++ EA   F ++     +PS                           
Sbjct: 78  AYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRM 137

Query: 388 --------LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG---- 435
                   + TY+  I  FCK+ +      L  NM + G   +AV    ++ GL      
Sbjct: 138 RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEH 197

Query: 436 -----------------DALRF------------FFQSVRM-------TLIPNLFIFNTL 459
                            D + F             F+S R+        + PNLF FN  
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257

Query: 460 MDGCCR---LKRATDTVKLF----MLMGMYN--IKPDVITHTVLIRGIASQGSLSSAILL 510
           + G CR   L RA    ++      L  M N   +PD +T+  +I G   +G +  A  +
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV 317

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
               + +G  PD  TY ++I+G  K  +    + +FK     G+ P I +YN L+  L +
Sbjct: 318 LKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQ 377

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
           +  +  AL+L  ++ + G  P+I TYN +I G C +  C+ D 
Sbjct: 378 QGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKM-GCVSDA 419


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 219/429 (51%), Gaps = 5/429 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  +++   R G +E A  +   ++ +G  P +VT N +LK L  NG+   A  +F  +
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+V +F+ LI  FC+  +LE+A + Y  M    + PD++ +S LI    + G +
Sbjct: 256 DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEM 315

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               E L    + GL  D V+++ V+  +   G +  A++  D M+  G LP+V++Y+ L
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTL 375

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GLC++ RL +A  L  ++  R + P L T+++LI G+C+ G +      +D +  + L
Sbjct: 376 LNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD V  + LI+G+     +G A   +       + PN   ++ L+D  C   +  +   
Sbjct: 436 RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFA 495

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
               M    I P+++T+  +I+G    G++S       +M    + PD+ITY+ +IHG  
Sbjct: 496 FLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYV 555

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +    ++ K+ME   V PD   YN++++      N+  A  ++ ++  RG+EPD  
Sbjct: 556 KEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRY 615

Query: 595 TYNTIICGY 603
           TY ++I G+
Sbjct: 616 TYMSMINGH 624



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 215/406 (52%), Gaps = 5/406 (1%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++ +R   P++VT N ++      G +  A +L D ++  G KP +VT+++++    +  
Sbjct: 184 EMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNG 243

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           + +KA +++  M    + PD+  +++LI G  +AG L+E          R +  DVV FS
Sbjct: 244 RWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFS 303

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            ++  +   G++  A +    M   G +P+ + Y+++I G C+ G ++EA  +  +++  
Sbjct: 304 CLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAF 363

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----A 437
              P ++TY++L++G CK  +L D   L + M +RG+ PD    + LI+G   D     A
Sbjct: 364 GCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           L+FF       L P++  +NTL+DG CR        +L+  M    I P+ +T+++LI  
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDS 483

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
              +G + +A     +M+ +G+ P+++TY++II G  +  N+S G      M  + V PD
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           +  YN L++  +KE  +  A  L   + +  ++PD +TYN II G+
Sbjct: 544 LITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGF 589



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 207/421 (49%), Gaps = 5/421 (1%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           G   Y  ++ GLLR G  + A  + R +   G  P++ + N ++   C  G++  A   +
Sbjct: 228 GLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFY 287

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             +      P+VV+FS LI  F +  +++ A +    M E  L+PD +IY+++I G  +A
Sbjct: 288 KEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRA 347

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G + E   +    +  G   DVV ++++++       +  A +  + M   G  P++ ++
Sbjct: 348 GLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTF 407

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI G C+ G + +A   F  +  +RL P ++TY++LIDG C+ G L     L+D+M  
Sbjct: 408 TTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHS 467

Query: 417 RGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           R + P+ V  S+LI+     G + +A  F  + V   ++PN+  +N+++ G CR    + 
Sbjct: 468 REIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSK 527

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             +    M    + PD+IT+  LI G   +G +  A  L   M    + PD +TY+ II 
Sbjct: 528 GQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIIS 587

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G     N+     ++K M   G+ PD   Y  ++N  +   N   + +L  ++  +GL P
Sbjct: 588 GFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647

Query: 592 D 592
           D
Sbjct: 648 D 648



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 200/363 (55%), Gaps = 5/363 (1%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           N  T + +++++CK  +  +   + + M +  + PD++ +++++D  F+AG ++    L+
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
            + + +G+K  +V ++SV+   +  G   +A + +  M   G  P+V S+++LI G C+ 
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G L EA   + ++  RR+ P ++++S LI  F + G++         M + GL PD V+ 
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337

Query: 427 SLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           +++I G     LM +ALR   + V    +P++  +NTL++G C+ +R +D  +L   M  
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             + PD+ T T LI G    G++  A+  F  +  + L PD++TY+ +I G+ +  ++  
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK 457

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
              ++  M    + P+   Y++L++   ++  +D A     ++ ++G+ P+I+TYN+II 
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIK 517

Query: 602 GYC 604
           GYC
Sbjct: 518 GYC 520



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 210/416 (50%), Gaps = 42/416 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLC 170
           ++ LI  + R G+++E++  +  M   G  ++PD+V    SCL+        +    +  
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMR--GRRVTPDVVS--FSCLIGLFTRRGEMDHAAEYL 322

Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           R MR  G      +Y  ++ G  R G++  A  +  +++  G +P++VT N +L  LC  
Sbjct: 323 REMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKE 382

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            ++ +A  L + +   G  P++ TF+TLI+ +C++  +EKA Q ++ + +  L PD++ Y
Sbjct: 383 RRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTY 442

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LIDG+ + G L + NEL      R +  + V +S ++D++   G V  A    D M+N
Sbjct: 443 NTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVN 502

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G +PN+++Y+ +IKG C+ G + +      ++   ++ P L+TY++LI G+ K GK+ +
Sbjct: 503 KGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHE 562

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
            F+L   M    ++PDAV  +++I+G           SV   +    +++          
Sbjct: 563 AFNLLKIMENENVQPDAVTYNMIISGF----------SVHGNMQEADWVYKK-------- 604

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
                       MG   I+PD  T+  +I G    G+   +  L  +ML++GL PD
Sbjct: 605 ------------MGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 165/371 (44%), Gaps = 40/371 (10%)

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           LL   P P    F  LI  + +  K  +AF+ + L+++  +       + L+  L +AG 
Sbjct: 80  LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGW 139

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
                   LTA                DAY  +      V TY             + +I
Sbjct: 140 PH------LTA----------------DAYRLVLSSNSEVNTY-------------TLNI 164

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           ++   C+  +  E   +  ++  R + P ++T++ ++D   ++G +    +L D+M+ +G
Sbjct: 165 MVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG 224

Query: 419 LKP-----DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           +KP     ++V+  LL NG    A   F       + P++  FN L+ G CR     + +
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEAL 284

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           + +  M    + PDV++ + LI     +G +  A     +M + GL PD + Y+ +I G 
Sbjct: 285 RFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGF 344

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            +   +   L +   M   G  PD+  YN LLN L KE  L  A +L  ++ +RG+ PD+
Sbjct: 345 CRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDL 404

Query: 594 ITYNTIICGYC 604
            T+ T+I GYC
Sbjct: 405 CTFTTLIHGYC 415



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 127/246 (51%), Gaps = 8/246 (3%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLC 170
           C ++ LI  Y R G I+++++ F  +SD    L PD+V    L+  +     +G+  +L 
Sbjct: 405 CTFTTLIHGYCRDGNIEKALQFFDTISDQ--RLRPDIVTYNTLIDGMCRQGDLGKANELW 462

Query: 171 RAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M  +        Y  L++    KG ++NAF    +++ +G VPNI+T N I+K  C +
Sbjct: 463 DDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRS 522

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +         +      P+++T++TLI+ + KE K+ +AF L  +M   ++ PD + Y
Sbjct: 523 GNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTY 582

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +++I G    G ++E + +      RG++ D   + S+++ +V  G+  ++ Q +D ML 
Sbjct: 583 NMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQ 642

Query: 347 GGFLPN 352
            G  P+
Sbjct: 643 KGLAPD 648


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 256/518 (49%), Gaps = 18/518 (3%)

Query: 96  KTYNFFRLFRDS--LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
           + Y  F   R S  LGD+   +  LIE     GK+DE+ E++  M + G     ++   L
Sbjct: 177 EAYELFERMRKSGCLGDY-VTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSL 235

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +  L  +  V +  ++ + +  K        Y  LM+G  + G +++   +  Q+++   
Sbjct: 236 IFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDN 295

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P+I T N ++       ++ +A  LF +L   G KPN  T++T+I       ++E+A  
Sbjct: 296 FPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKA 355

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
            ++  +      D+I Y+ +I GL  + R+ E  EL       G   +VV +++V+D  +
Sbjct: 356 FFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLL 409

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G +   ++ ++ M     +P   +Y+++I GLC+   L +AC +F Q++ +   P  +
Sbjct: 410 KAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 469

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQS 444
           TY++LIDGF K+ K+ +   L D M+ +G +P AV    +++G     ++ +A     Q 
Sbjct: 470 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 529

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
                 P LFIF +L+       RA +  ++   M      PDVI +T LI  + S G +
Sbjct: 530 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 589

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  +F  M+++G  PD +TY  II    K  N+     + +LM ++GV PD   YN L
Sbjct: 590 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSL 649

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           ++  +K   +D A  ++ ++   G++P+ +T+N ++ G
Sbjct: 650 MDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 687



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 271/576 (47%), Gaps = 57/576 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG 95
           N ++A   + N    A++ FK   +    PN A    ++           ++D   ++  
Sbjct: 303 NILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTII---------QGLYDAQRMEEA 353

Query: 96  KTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RL 153
           K   FF    D +      Y+ +I+      +IDE+ E+F  +   G   SP++V    +
Sbjct: 354 KA--FFDEALDVIS-----YTTVIKGLADSKRIDEACELFEKLKTAGC--SPNVVAYTAV 404

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           +  L+ +  +    K    M G   CV     Y  +++GL +  ++ +A  +  Q++Q+G
Sbjct: 405 IDGLLKAGRIEDGLKNFEDMSGSS-CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 463

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
            VP+ +T   ++       ++  A  L DV+L  GP+P  VT+ ++++ FCK   + +A 
Sbjct: 464 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 523

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           ++   M E    P L I++ L+      GR +E  ++L     RG   DV++++S++D  
Sbjct: 524 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 583

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPS 387
              G V  A   +D M+  G  P+ ++Y  +I+   + G  VEA G   +++ +  + P 
Sbjct: 584 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN-VEAAGEILELMAKSGVGPD 642

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
              Y+SL+DG+ K  ++   F +YD M+  G+KP+AV  ++L++GL  D           
Sbjct: 643 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG---------- 692

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
                            +  RA    K   ++    + P ++++T+LI G+   G +S A
Sbjct: 693 -----------------KTDRAFSLFK--EMLEKDEVPPTLVSYTILIDGLGKAGRVSEA 733

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
              F +M+ RG+ P+  TY+++I+ L K   I     + + M + GV PD+  Y+ L+  
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 793

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           LI    +D A  +F ++  RG  P+ +TY  +  G+
Sbjct: 794 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 829



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 228/479 (47%), Gaps = 70/479 (14%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +E A    +++   G +P++V CN +L  LC   +I  A  LF  +  +G +P +V+++T
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +I+      K+++A++ +N M++    PD+I ++ LI G  KAG+ + G+ LL  AL R 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ-------- 365
            + DV +++SV+  Y   GD+    +  + ML  G +P+  +Y +LI  LC+        
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 366 ---------------------------QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
                                       G+L EAC L+ +++ R  EP L    SLI   
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           CK+GK+ +   +Y  ++ + +    V  + L++G      + D L+   Q V     P++
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP--------------------------- 486
             +N L+ G  R  R  D ++LF L+  Y  KP                           
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359

Query: 487 --DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
             DVI++T +I+G+A    +  A  LF ++   G +P+V+ Y+A+I GL K   I  GL 
Sbjct: 360 ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 419

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            F+ M  +   P    Y V+++ L K   L  A K+F Q+  +G  PD ITY T+I G+
Sbjct: 420 NFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF 478



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 267/598 (44%), Gaps = 39/598 (6%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKM-- 90
           N +L  L K      AI+ F    +    P I     +I  L   D  D A   F+ M  
Sbjct: 24  NIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID 83

Query: 91  ------VIQF----------GKTYNFFRLFRDSLGDFGCD---YSFLIENYVRIGKIDES 131
                 VI F          G+      L   +L  F  D   Y+ +I  Y + G +D  
Sbjct: 84  NGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTG 143

Query: 132 VEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNG 187
            +I   M   G          L+  L     V + Y+L   MR  G    +  +  L+  
Sbjct: 144 FKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEA 203

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L   G ++ A  ++R++I+RG+ P +   + ++  LC  G++  A+ ++  ++      +
Sbjct: 204 LSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATS 263

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
            V +++L++ +CK  +++   +L   M+E D  PD+  Y+IL+ G  +A RL +  EL  
Sbjct: 264 RVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFK 323

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
                G K +   +++++        +  A   +D  L+      VISY+ +IKGL    
Sbjct: 324 LLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALD------VISYTTVIKGLADSK 377

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           R+ EAC LF ++      P+++ Y+++IDG  K+G++ DG   +++M      P     +
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYT 437

Query: 428 LLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           ++I+GL     + DA + F Q V+   +P+   + TL+DG  +  +  +  KL  +M   
Sbjct: 438 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 497

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
             +P  +T+  ++ G      ++ A  +  QM +RG  P +  +++++            
Sbjct: 498 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 557

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             +   M   G APD+ +Y  L+++L     +  A  +F  + ++G  PD +TY TII
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 615



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 154/332 (46%), Gaps = 40/332 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++  + ++  I+E+ E+ A M + G      +   L+S  +      + Y++   M 
Sbjct: 506 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 565

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP----------------NIV 214
            +G      +Y  L++ L   G +  A H+   +I++G  P                N+ 
Sbjct: 566 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 625

Query: 215 TCNKILKRLCING-------------------QIGNASSLFDVLLLVGPKPNVVTFSTLI 255
              +IL+ +  +G                   ++  A  ++D ++  G KPN VTF+ L+
Sbjct: 626 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 685

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPD-LIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           +   K+ K ++AF L+  M+E D VP  L+ Y+ILIDGL KAGR+ E        +DRG+
Sbjct: 686 HGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGI 745

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             +   ++S++ +    G +  A +  + M+  G  P+V +YS LI GL     +  A  
Sbjct: 746 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 805

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
           +F +++ R   P+ +TY  L  GF  +G+  D
Sbjct: 806 VFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 837



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%)

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A+    +M   GL PDV+  + +++GL K + I   + +F  M   G  P I  YN 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +++ L     +D A K F  + D G EPD+I + T+I G+C
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFC 101



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L   K M   G+ PD+   N++LN L K   +D A++LF ++   G EP I++YNT+I 
Sbjct: 4   ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63

Query: 602 GYCSLN 607
           G  S++
Sbjct: 64  GLASID 69


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/559 (26%), Positives = 269/559 (48%), Gaps = 21/559 (3%)

Query: 67  IAQLIHVLLQSDMRDVASHVFDKMVIQ--------FGKTYNFFRLFRDSLGDFGCDYSFL 118
           + + ++V  + D  D    VF    I         F + +  +   RD  G     YSF 
Sbjct: 92  VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR-GITPDVYSFT 150

Query: 119 I--ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
           I  +++ +  +   ++ +   MS  G  ++      ++    + N   + Y+L   M   
Sbjct: 151 IRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS 210

Query: 177 G--FCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G   C+  F  L+  L +KG ++    +  +VI+RG +PN+ T N  ++ LC  G++  A
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             +   L+  GPKP+V+T++ LI   CK +K ++A      M+   L PD   Y+ LI G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
             K G ++    ++  A+  G   D   + S++D     G+  RA+  ++  L  G  PN
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           VI Y+ LIKGL  QG ++EA  L  ++  + L P + T++ L++G CK G + D   L  
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            MI +G  PD    ++LI+G      M +AL      +   + P+++ +N+L++G C+  
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  D ++ +  M      P++ T  +L+  +     L  A+ L  +M  + + PD +T+ 
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570

Query: 528 AIIHGLFKGKNISVGLHMFKLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            +I G  K  ++     +F+ ME    V+     YN++++   ++ N+  A KLF ++ D
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630

Query: 587 RGLEPDIITYNTIICGYCS 605
           R L PD  TY  ++ G+C 
Sbjct: 631 RCLGPDGYTYRLMVDGFCK 649



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 224/431 (51%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY   M    RKG ++ A ++  ++      P + + N I+  L  +G    A  ++  +
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+V +F+  + +FCK ++   A +L N M       +++ Y  ++ G ++    
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            EG EL    L  G+ L +  F+ ++      GDV    +  D+++  G LPN+ +Y++ 
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+GLCQ+G L  A  + G ++ +  +P ++TY++LI G CK+ K ++       M+  GL
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317

Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD+   + LI      G++  A R    +V    +P+ F + +L+DG C        + 
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF       IKP+VI +  LI+G+++QG +  A  L  +M ++GL P+V T++ +++GL 
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +S    + K+M   G  PDI  +N+L++    +  ++ AL++   + D G++PD+ 
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497

Query: 595 TYNTIICGYCS 605
           TYN+++ G C 
Sbjct: 498 TYNSLLNGLCK 508



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 194/420 (46%), Gaps = 10/420 (2%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS-LFDVLLLVGPKPNVVTFSTLINAF 258
           M ++V   GF   + T   ++++L   G+       L D+   VG       +   +  +
Sbjct: 30  MRKEV---GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNY 86

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
            ++ K+++A  ++  M   D  P +  Y+ ++  L  +G   + +++ +   DRG+  DV
Sbjct: 87  GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
             F+  M ++        A++  + M + G   NV++Y  ++ G  ++    E   LFG+
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----- 433
           +L   +   L T++ L+   CK G +++   L D +IKRG+ P+    +L I GL     
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           +  A+R     +     P++  +N L+ G C+  +  +       M    ++PD  T+  
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI G    G +  A  +    +  G  PD  TY ++I GL      +  L +F      G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
           + P++ +YN L+  L  +  +  A +L  +++++GL P++ T+N ++ G C +  C+ D 
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM-GCVSDA 445


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 241/493 (48%), Gaps = 13/493 (2%)

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFC 179
           Y+    +D+++  F  M  + ++  P +V   ++++ +           L R M   G  
Sbjct: 49  YLHFNTLDDALSSFNRM--LHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIP 106

Query: 180 --VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
             VY    L+N       +  AF +  ++++ G  P+  +   ++K LC+ GQIG A  L
Sbjct: 107 HNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHL 166

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           FD ++  G +P+VV ++TLIN  CK      A +L   M + +  PD+++Y  LI  L K
Sbjct: 167 FDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCK 226

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
             +  +   L    + +G+  ++V  +S++ A   +G+        + M++   +PN IS
Sbjct: 227 DRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAIS 286

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
            + ++  LC++G + +A  +   +    +EP ++TY++LIDG C   ++ +   ++D M+
Sbjct: 287 LTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMV 346

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            +G  P+    + LING      M  A+  F +  R  LIPN   +NTL+ G C + R  
Sbjct: 347 HKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQ 406

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D + LF  M      PD++T+ +L+  +     L  A+ L   +    L PD+  Y+ +I
Sbjct: 407 DAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVI 466

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G+ +   +     +F  +   G+ P++  YN++ + L K   LD A KLF ++ +    
Sbjct: 467 DGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACS 526

Query: 591 PDIITYNTIICGY 603
            D  TYNTI  G+
Sbjct: 527 ADGCTYNTITQGF 539



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 216/410 (52%), Gaps = 5/410 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           + R++   G   N+ T N ++   C   ++  A S+   +L +G +P+  +F+TLI   C
Sbjct: 96  LSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLC 155

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            E ++ +A  L++ M+     PD++IY+ LI+GL K G       LL +      + DVV
Sbjct: 156 LEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVV 215

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           V+ +++ +        +A   +  M+  G  PN+++ + L+  LC  G       L  ++
Sbjct: 216 VYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEM 275

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
           +  ++ P+ ++ ++++D  CK G +     + D M + G++PD V  + LI+G      M
Sbjct: 276 VDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEM 335

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++ F   V     PN+F +NTL++G C+++R    + LF  M    + P+ +T+  L
Sbjct: 336 DEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTL 395

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+   G L  AI LF +M+  G  PD++TY  ++  L K  ++   + + K +E + +
Sbjct: 396 IHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNL 455

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            PDI IY ++++ + +   L+ A  LF  L+ +GL+P++ TYN +  G C
Sbjct: 456 DPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLC 505



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 230/460 (50%), Gaps = 9/460 (1%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI ++  + +++ +  + A +  +G          L+  L     +G+   L   M  +G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
           F     +Y  L+NGL + G    A  + R + +    P++V    ++  LC + Q   A 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           +LF  ++  G  PN+VT ++L+ A C   + +    L N M++  ++P+ I  + ++D L
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G + + ++++      G++ DVV +++++D +    ++  AV+ +D M++ G  PNV
Sbjct: 295 CKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNV 354

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            SY+ LI G C+  R+ +A  LF ++  ++L P+ +TY++LI G C  G+L+D  +L+  
Sbjct: 355 FSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFRE 414

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M+  G  PD V   +L++ L     +  A+          L P++ I+  ++DG CR   
Sbjct: 415 MVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGE 474

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             D   LF  +    +KP+V T+ ++  G+  +G L  A  LF +M +   + D  TY+ 
Sbjct: 475 LEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNT 534

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           I  G  +    S  + + + M   G + D++   +L+ ML
Sbjct: 535 ITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGML 574



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 182/420 (43%), Gaps = 67/420 (15%)

Query: 83  ASHVFDKMVIQ------------------FGKTYNFFRLFRDSLGDFGCD-----YSFLI 119
           A H+FDKM+ +                   G T    RL R S+    C      Y  LI
Sbjct: 163 ALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLR-SMEKGNCQPDVVVYGTLI 221

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG 177
            +  +  +  ++  +F+ M   GI  SP++V    L+  L +         L   M    
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGI--SPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279

Query: 178 FCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                     +++ L ++G++  A  +   + Q G  P++VT   ++   C+  ++  A 
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAV 339

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            +FD+++  G  PNV +++TLIN +CK  +++KA  L+  M    L+P+ + Y+ LI GL
Sbjct: 340 KVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGL 399

Query: 294 FKAGRLKEGNEL------------LLT------------ALDRGLKL-----------DV 318
              GRL++   L            L+T             LD+ + L           D+
Sbjct: 400 CHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDI 459

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
            +++ V+D     G++  A   +  + + G  PNV +Y+I+  GLC++G L EA  LF +
Sbjct: 460 QIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFME 519

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL 438
           +          TY+++  GF ++ +      L + M+ RG   D    +LL+  L  D L
Sbjct: 520 MDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGL 579



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 1/158 (0%)

Query: 450 IP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           IP N++  N L++  C L R      +   +     +PD  + T LI+G+  +G +  A+
Sbjct: 105 IPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEAL 164

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            LF +M+  G  PDV+ Y+ +I+GL K  + S  + + + ME+    PD+ +Y  L++ L
Sbjct: 165 HLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSL 224

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            K+     A  LF ++  +G+ P+I+T N+++   C+L
Sbjct: 225 CKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNL 262


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/559 (27%), Positives = 271/559 (48%), Gaps = 21/559 (3%)

Query: 67  IAQLIHVLLQSDMRDVASHVFDKMVIQ--------FGKTYNFFRLFRDSLGDFGCDYSFL 118
           + + ++V  + D  D    VF    I         F + +  +   RD  G     YSF 
Sbjct: 92  VQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDR-GITPDVYSFT 150

Query: 119 I--ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
           I  +++ R  +   ++ +   MS  G  ++      ++    + N   + Y+L   M   
Sbjct: 151 IRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLAS 210

Query: 177 G--FCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G   C+  F  L++ L +KG ++    +  +VI+RG +PN+ T N  ++ LC  G++  A
Sbjct: 211 GVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAA 270

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             +   L+  GPKP+VVT++ LI   CK +K ++A      ++   L PD   Y+ LI G
Sbjct: 271 VRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAG 330

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
             K G ++    +L+ A+  G   D   + S++D     G+  RA+  ++  L  G  PN
Sbjct: 331 YCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           VI Y+ LIKGL  QG ++EA  L  ++  + L P + T++ L++G CK G + D   L  
Sbjct: 391 VILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            MI +G  PD    ++LI+G      M +AL      +   + P+++ +N+L++G C+  
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTS 510

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  D ++ +  M      P++ T  +L+  +     L  A+ L  +M  + + PD +T+ 
Sbjct: 511 KYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFG 570

Query: 528 AIIHGLFKGKNISVGLHMFKLMER-NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            +I G  K  ++     +F+ ME    V+     YN++++   ++ N+  A KLF ++ D
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630

Query: 587 RGLEPDIITYNTIICGYCS 605
           R L PD  TY  ++ G+C 
Sbjct: 631 RCLGPDGYTYRLMVDGFCK 649



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 223/431 (51%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY   M    RKG ++ A ++  ++      P + + N I+  L  +G    A  ++  +
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM 137

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+V +F+  + +FC+ ++   A +L N M       +++ Y  ++ G ++    
Sbjct: 138 RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            EG EL    L  G+ L +  F+ ++      GDV    +  D+++  G LPN+ +Y+  
Sbjct: 198 DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFF 257

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+GLCQ+G L  A  + G+++ +  +P ++TY+ LI G CK+ K ++       ++  GL
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL 317

Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD+   + LI      G++  A R    +V    +P+ F + +L+DG C        + 
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALA 377

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF       IKP+VI +  LI+G+++QG +  A  L  +M ++GL P+V T++ +++GL 
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLC 437

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +S    + K+M   G  PDI  +N+L++    +  ++ AL++   + D G++PD+ 
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVY 497

Query: 595 TYNTIICGYCS 605
           TYN+++ G C 
Sbjct: 498 TYNSLLNGLCK 508



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 192/414 (46%), Gaps = 7/414 (1%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASS-LFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           + GF   + T   I+++L + G+       L D+   VG       +   +  + ++ K+
Sbjct: 33  EDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKV 92

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           ++A  ++  M   D  P +  Y+ ++  L  +G   + +++ +   DRG+  DV  F+  
Sbjct: 93  QEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           M ++        A++  + M + G   NV++Y  ++ G  ++    E   LFG++L   +
Sbjct: 153 MKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGV 212

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
              L T++ L+   CK G +++   L D +IKRG+ P+    +  I GL     +  A+R
Sbjct: 213 SLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVR 272

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              + +     P++  +N L+ G C+  +  +       +    ++PD  T+  LI G  
Sbjct: 273 MVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYC 332

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G +  A  +    +  G  PD  TY ++I GL      +  L +F      G+ P++ 
Sbjct: 333 KGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
           +YN L+  L  +  +  A +L  +++++GL P++ T+N ++ G C +  C+ D 
Sbjct: 393 LYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKM-GCVSDA 445


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/426 (31%), Positives = 223/426 (52%), Gaps = 7/426 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++ GL R G +  A  + R++ ++   P+IV+ N ++  LC   ++  A  L   +   G
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN VT +TL++  CK+ ++++A +L   M +     D+++Y  LI G    G L  G 
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL    L +G+  +VV +S ++     +G    A    + M   G  P+V++Y+ LI GL
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+ GR   A  L   ++ +  EPS +TY+ L+ G CK G + D F +   MI++G K D 
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243

Query: 424 VVCSLLINGL-----MGDALRFFFQ--SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           V  + L+ GL     + +AL+ F         L PN+F FN L+ G C+  R T  VK+ 
Sbjct: 244 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M       +++T+ +L+ G    G +  A+ L+ Q+L  G  P+  TYS +I G  K 
Sbjct: 304 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 363

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
           + +++   +F  M  +G+ P +  YN L+  L KE +L+ A  LF ++ +   EPDII++
Sbjct: 364 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISF 423

Query: 597 NTIICG 602
           NT+I G
Sbjct: 424 NTMIDG 429



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 250/501 (49%), Gaps = 11/501 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI    +  K+ E+V +   M   G + +      LM  L     + +  +L  AM+
Sbjct: 36  YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 95

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KGF     +Y  L++G    G ++    +  +++ +G   N+VT + ++  LC  GQ  
Sbjct: 96  KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWK 155

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+++ + +   G  P+VVT++ LI+  CK+ +   A  L NLM+E    P  + Y++L+
Sbjct: 156 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 215

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG-- 348
            GL K G + +  ++L   +++G K DVV ++++M      G V  A++ ++ M +    
Sbjct: 216 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 275

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV ++++LI GLC++GRL +A  +  +++ +    +L+TY+ L+ G  K+GK+++  
Sbjct: 276 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 335

Query: 409 SLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  ++  G  P++   S+LI+G     ++  A   F +     L P LF +NTLM   
Sbjct: 336 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 395

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+         LF  MG  N +PD+I+   +I G    G       L  +M++ GL PD 
Sbjct: 396 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDA 455

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +T+S +I+ L K   +       + M  +G  PD  +Y+ LL  L  + +    + L  Q
Sbjct: 456 LTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQ 515

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           +  +G   D    +TI+   C
Sbjct: 516 MAAKGTVLDRKIVSTILTCLC 536



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 240/487 (49%), Gaps = 14/487 (2%)

Query: 133 EIFAYMSDMG-IYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLM 185
           E    + +MG   +SPD+V    L++ L  +  + +   L   M   G          LM
Sbjct: 16  EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 75

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           +GL + G ++ A  +   + ++GF  ++V    ++   C NG +     LFD +L  G  
Sbjct: 76  DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 135

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
            NVVT+S L++  C+  + ++A  + N M E  + PD++ Y+ LIDGL K GR     +L
Sbjct: 136 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 195

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L   +++G +   V ++ ++      G V  A +    M+  G   +V++Y+ L+KGLC 
Sbjct: 196 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 255

Query: 366 QGRLVEACGLFGQVLIRR--LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           +G++ EA  LF  +      LEP++ T++ LI G CK G+L     ++  M+K+G   + 
Sbjct: 256 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 315

Query: 424 VVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  ++L+ G +      +A+  + Q + +  +PN F ++ L+DG C+++       LF  
Sbjct: 316 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 375

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M  + + P +  +  L+  +  +GSL  A  LF +M      PD+I+++ +I G  K  +
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
                 +   M   G+ PD   ++ L+N L K   LD A     ++   G  PD + Y++
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495

Query: 599 IICGYCS 605
           ++ G  S
Sbjct: 496 LLKGLSS 502



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 41/293 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++     GK+DE++++F  M D    L P++     L+  L     + +  K+ R 
Sbjct: 246 YNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRK 305

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT------------- 215
           M  KG C     Y  L+ G L+ G I+ A  + +QV+  GFVPN  T             
Sbjct: 306 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 365

Query: 216 --------C--------------NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
                   C              N ++  LC  G +  A SLF  +     +P++++F+T
Sbjct: 366 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 425

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +I+   K    +   +L   M+EM L PD + +S LI+ L K G L E    L   +  G
Sbjct: 426 MIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 485

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              D +V+ S++      GD    +    +M   G + +    S ++  LC  
Sbjct: 486 FTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 538


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 259/571 (45%), Gaps = 81/571 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   + NY R GKI E+V++F  M       S      +M+ LV+     Q +K+   MR
Sbjct: 79  YIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMR 138

Query: 175 GKGFC--VYEF------------------LMNGLLRKGVIENAF-----------HMHR- 202
            KG    VY F                  L+N +  +G   +A              HR 
Sbjct: 139 DKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRV 198

Query: 203 -------QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
                  +++  G  P+I+  NK++  LC  G +  +  L + +L  G  PN+ T +  I
Sbjct: 199 EAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFI 258

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
             FC+ A L +A +L + +    L PD+I Y+ LI GL K  ++ E    L   ++ G +
Sbjct: 259 QGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYE 317

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D   ++S++D Y  +G +  A Q        GF+P+  +Y  LI GLCQ G +  A  +
Sbjct: 318 PDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINV 377

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F + + + L+P+L+  ++L+ G  + G +     L + M + G  PD    +L+INGL  
Sbjct: 378 FNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCK 437

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              + DA      ++    +P++F FNTL+DG C+  +  + +++   M  + + PDVIT
Sbjct: 438 IGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVIT 497

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  ++ G+   G     +  F  M+++G  P++ITY+ +     K + +   L++ + M+
Sbjct: 498 YNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQ 557

Query: 551 RNGVAPD------------------------------------IAIYNVLLNMLIKECNL 574
             G+ PD                                    IA YN+++N    + N+
Sbjct: 558 NKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNM 617

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           + A KLF ++ + G  PD  TY  +I G+C 
Sbjct: 618 NMAEKLFNKMCENGFSPDSYTYRVMIDGFCK 648



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/604 (24%), Positives = 282/604 (46%), Gaps = 68/604 (11%)

Query: 17  KCYCSESKTHISDLQFNQANA------------ILANLIKTNNPTPAIQFFKWTHNCVSS 64
           K +C  S+ H +    N   +            ++    + N+   A + F+        
Sbjct: 154 KSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGIC 213

Query: 65  PNIA---QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           P+I    +LIH L +      +  + +K V++ G + N F +            +  I+ 
Sbjct: 214 PDIMAFNKLIHTLCRKGHVQESERLLNK-VLKRGVSPNLFTV------------NIFIQG 260

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF- 178
           + +   ++E++ +   +  +G  L+PD++    L+  L  +  V +     R M  +G+ 
Sbjct: 261 FCQRAMLNEAIRL---LDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYE 317

Query: 179 ---CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                Y  +++G  + G+++NA  + R    +GFVP+  T   ++  LC +G I  A ++
Sbjct: 318 PDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINV 377

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F+  +  G KPN+V  +TL+    ++  + +A +L N M E    PD+  Y+++I+GL K
Sbjct: 378 FNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCK 437

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G + + + L++ A+ +G   DV  F++++D Y     +  A++  DRM N G  P+VI+
Sbjct: 438 IGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVIT 497

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ ++ GLC+ G+  +  G F  ++ +   P+++TY+ L + FCK+ K+ +  +L + M 
Sbjct: 498 YNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQ 557

Query: 416 KRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            +GL PD V    L+ G                     F  N  +DG  +L +  D    
Sbjct: 558 NKGLTPDVVNFGTLMKG---------------------FCDNGDLDGAYQLFKRVDE--- 593

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
                 Y     + T+ ++I   A + +++ A  LF +M + G +PD  TY  +I G  K
Sbjct: 594 -----QYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCK 648

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
             NI+ G     +    G+ P +  +  +LN L  +  +  A+ +   +  +G+ P+++ 
Sbjct: 649 TGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV- 707

Query: 596 YNTI 599
            NTI
Sbjct: 708 -NTI 710



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 179/387 (46%), Gaps = 32/387 (8%)

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+I  A  +F+ +     +P+V +++ ++N   +    ++A ++Y  M +  +VPD+  +
Sbjct: 90  GKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTF 149

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +I +    +  R      LL     +G +   V + +V+  +        A + ++ ML 
Sbjct: 150 TIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLG 209

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P++++++ LI  LC++G + E+  L  +VL R + P+L T +  I GFC+   L +
Sbjct: 210 LGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNE 269

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
              L D  + RGL PD +                               +NTL+ G C+ 
Sbjct: 270 AIRLLDG-VGRGLTPDVIT------------------------------YNTLICGLCKN 298

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  +       M     +PD  T+  +I G    G + +A  +      +G  PD  TY
Sbjct: 299 FKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTY 358

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            ++I+GL +  +I   +++F      G+ P++ + N L+  L ++  +  ALKL  ++++
Sbjct: 359 CSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSE 418

Query: 587 RGLEPDIITYNTIICGYCSLNSCLIDG 613
            G  PDI TYN +I G C +  C+ D 
Sbjct: 419 NGCSPDIWTYNLVINGLCKI-GCVSDA 444



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 25/113 (22%), Positives = 51/113 (45%)

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           +R    +G +  A+ +F +M      P V +Y+AI++ L + +       ++  M   G+
Sbjct: 83  MRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGI 142

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            PD+  + + +    +     AA +L   +  +G E   + Y T+I G+   N
Sbjct: 143 VPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEEN 195


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 256/517 (49%), Gaps = 16/517 (3%)

Query: 99  NFFRLFRDS--LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
           N+FR   +S         Y  +IE   R   +D    +   M   GI  S DL   +++ 
Sbjct: 64  NYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINT 123

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHM----HRQVIQRGFVPN 212
                   Q  K+   +R  G      + N LL   + EN F M    +  + + G  PN
Sbjct: 124 YRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPN 183

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           + T N +LK LC N ++  A  L   +   G +P+VV+++T+I++  K  K+E+A +L  
Sbjct: 184 VYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-- 241

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
               +   P++ +Y+ LI+G  +  ++KE   LL   +++G+  +V+ +S+V+ +  GIG
Sbjct: 242 ---SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIG 298

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           +V  A+  + +M   G  PNV +++ L+KG   +GR++EA  ++ ++     EP+++ Y+
Sbjct: 299 NVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYN 358

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRM 447
           +LI G C  GK+ +  S+   M + G  P+      LI+G    GD   A   + + +  
Sbjct: 359 TLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTN 418

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
             IPN+ ++ ++++  CR    +    L   M   N  P+ +T    I+G+   G +  A
Sbjct: 419 GCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECA 478

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           I LF QM + G +P++ TY+ ++ GL K   I   L +   ME  G+  ++  YN +   
Sbjct: 479 INLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGG 538

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
                  + ALKL G++   G++PD ITYNT+   YC
Sbjct: 539 FCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYC 575



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 234/498 (46%), Gaps = 15/498 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YYKLCRAM 173
           +I  Y R+G  ++++++F  + + G   +  +   L+  ++  N        Y  + R  
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDG 179

Query: 174 RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
           +      Y  L+  L +   ++ A  +  ++  +G  P++V+   ++  +   G++  A 
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAR 239

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L      +  +PNV  ++ LIN FC+E K+++ F L   M+E  + P++I YS +I  L
Sbjct: 240 ELS-----IRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
              G ++    +      RG   +V  F+S+M  Y   G V  A+  ++RM   GF PNV
Sbjct: 295 SGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNV 354

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ LI GLC  G++ EA  +  ++      P++ TY +LIDGF K+G L     +++ 
Sbjct: 355 VAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNK 414

Query: 414 MIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M+  G  P+ VV + ++N      +   A     +       PN   FNT + G C   R
Sbjct: 415 MMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGR 474

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               + LF  M  Y   P++ T+  ++ G+  +  +  A+ L  +M ++G+  +++TY+ 
Sbjct: 475 VECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNT 534

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           I  G          L +   M   GV PD   YN L      +  +  A++L  +L+  G
Sbjct: 535 IFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGG 594

Query: 589 -LEPDIITYNTIICGYCS 605
              P++  Y +++ G C+
Sbjct: 595 KWVPEVAAYTSLLWGICN 612



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 218/428 (50%), Gaps = 10/428 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++N   R G+ E A  M  ++ + G  P +   N +L  +    +      ++  +   G
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDG 179

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNV T++ L+ A CK  +++ A +L   M      PD++ Y+ +I  + K G+++E  
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAR 239

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL +       + +V V++++++ +     V        +M+  G  PNVI+YS +I  L
Sbjct: 240 ELSIR-----FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
              G +  A  ++ ++ +R   P++ T++SL+ G+   G++ +  ++++ M + G +P+ 
Sbjct: 295 SGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNV 354

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  + LI+GL     MG+A+    +  R    PN+  +  L+DG  +        +++  
Sbjct: 355 VAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNK 414

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      P+V+ +T ++  +      S A  L  +M      P+ +T++  I GL     
Sbjct: 415 MMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGR 474

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   +++F  ME+ G +P+I  YN +L+ L+KE  +  AL+L  ++ ++G+E +++TYNT
Sbjct: 475 VECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNT 534

Query: 599 IICGYCSL 606
           I  G+C++
Sbjct: 535 IFGGFCNV 542



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 226/462 (48%), Gaps = 11/462 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++   +  ++D + ++   MS+ G    PD+V    ++S +     V +  +L   
Sbjct: 187 YNILLKALCKNNRVDGACKLLVEMSNKGC--EPDVVSYTTVISSMSKLGKVEEARELSIR 244

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
            +     VY  L+NG  R+  ++  F +  Q++++G  PN++T + ++  L   G +  A
Sbjct: 245 FQ-PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELA 303

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
            +++  + + G  PNV TF++L+  +    ++ +A  ++N M E    P+++ Y+ LI G
Sbjct: 304 LAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHG 363

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L   G++ E   +       G   +V  + +++D +   GD+  A + +++M+  G +PN
Sbjct: 364 LCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPN 423

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V+ Y+ ++  LC+     +A  L  ++      P+ +T+++ I G C SG++    +L+ 
Sbjct: 424 VVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFC 483

Query: 413 NMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M + G  P+    + +++GL+      +AL    +     +  NL  +NT+  G C + 
Sbjct: 484 QMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVG 543

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG-LTPDVITY 526
           +  + +KL   M +  +KPD IT+  L      QG + +AI L  ++   G   P+V  Y
Sbjct: 544 KFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAY 603

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           ++++ G+     +   +     M   G+  + A +N L+  L
Sbjct: 604 TSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 141/292 (48%), Gaps = 5/292 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI      GK+ E+V + + M   G   +      L+     +  +    ++   M 
Sbjct: 357 YNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMM 416

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      VY  ++N L R  +   A+ +  ++      PN VT N  +K LC +G++ 
Sbjct: 417 TNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVE 476

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +LF  +   G  PN+ T++ +++   KE ++++A +L   M E  +  +L+ Y+ + 
Sbjct: 477 CAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIF 536

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG-F 349
            G    G+ +E  +LL   L  G+K D + ++++  AY   G V  A+Q  D++  GG +
Sbjct: 537 GGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKW 596

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           +P V +Y+ L+ G+C Q  + EA     ++L   +  +  T+++L+ G   S
Sbjct: 597 VPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNS 648


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 238/471 (50%), Gaps = 34/471 (7%)

Query: 132 VEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNG 187
           +++   M   G+  +P     ++  L  +  V +  ++ R M  +G      +Y  L++G
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
             + G + +A+ +  ++ +R   P+ +T   ++  LC  G++  A  LF  ++    +P+
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
            VT++ LI+ +CKE K+++AF L+N M++M L P+++ Y+ L DGL K G +   NELL 
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
               +GL+L++  ++S+++     G++ +AV+    M   GF P+ ++Y+ L+   C+  
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
            +V A  L  Q+L R L+P+++T++ L++GFC SG L DG  L   M+++G+ P+A    
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT-- 505

Query: 428 LLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                                       +N+L+   C       T +++  M    + PD
Sbjct: 506 ----------------------------YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPD 537

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
             T+ +LI+G     ++  A  L   M+ +G    V +Y+A+I G +K K       +F+
Sbjct: 538 GNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFE 597

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
            M R G+  D  IYN+  ++   E  ++  L+L  +  ++ L  DI T NT
Sbjct: 598 QMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 201/386 (52%), Gaps = 12/386 (3%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEA-------KLEKAFQLYNLMMEMDLVPDLI 284
           A  LFD +L  G   +V + +  I+   ++        K E   +L   M    L P+  
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ +I  L K G++ E   +L   +  G+  D V++++++D +  +G+V  A + +D M
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
                 P+ I+Y+ +I GLCQ GR++EA  LF +++ +RLEP  +TY++LIDG+CK GK+
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
           ++ FSL++ M++ GL P+ V  + L +GL     +  A     +  R  L  N++ +N+L
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           ++G C+       VKL   M +    PD +T+T L+        +  A  L  QML R L
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P V+T++ +++G      +  G  + K M   G+ P+   YN L+       N+ A  +
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 524

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCS 605
           ++  +  +G+ PD  TYN +I G+C 
Sbjct: 525 IYRGMCAKGVVPDGNTYNILIKGHCK 550



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 150/302 (49%), Gaps = 5/302 (1%)

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           +GLK +   ++ V+      G V  A +    M++ G  P+ + Y+ LI G C+ G +  
Sbjct: 217 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 276

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  LF ++  R++ P  +TY+++I G C++G++ +   L+  M+ + L+PD V  + LI+
Sbjct: 277 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 336

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           G      M +A     Q ++M L PN+  +  L DG C+        +L   M    ++ 
Sbjct: 337 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 396

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           ++ T+  L+ G+   G++  A+ L   M   G  PD +TY+ ++    K + +     + 
Sbjct: 397 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 456

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + M    + P +  +NVL+N       L+   KL   + ++G+ P+  TYN++I  YC  
Sbjct: 457 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 516

Query: 607 NS 608
           N+
Sbjct: 517 NN 518



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 197/419 (47%), Gaps = 52/419 (12%)

Query: 90  MVIQFGKTYNFFRLFRDSLGDF----GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           ++ + GK     R+ R+ + +     G  Y+ LI+ + ++G +  +  +F  M    I  
Sbjct: 232 LLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKI-- 289

Query: 146 SPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFH 199
           SPD +    ++  L  +  V +  KL   M  K        Y  L++G  ++G ++ AF 
Sbjct: 290 SPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFS 349

Query: 200 MHRQVIQRGFVPNIVT------------------------C-----------NKILKRLC 224
           +H Q++Q G  PNIVT                        C           N ++  LC
Sbjct: 350 LHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLC 409

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G I  A  L   + + G  P+ VT++TL++A+CK  ++ +A +L   M++ +L P ++
Sbjct: 410 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVV 469

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            +++L++G   +G L++G +LL   L++G+  +   ++S++  Y    ++    + Y  M
Sbjct: 470 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 529

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
              G +P+  +Y+ILIKG C+   + EA  L   ++ +    ++ +Y++LI GF K  K 
Sbjct: 530 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 589

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNT 458
            +   L++ M + GL  D  + ++  +     G M   L    +++   L+ ++   NT
Sbjct: 590 LEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 7/110 (6%)

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGL---FKGKNISV-GLHMFKLMER---NGVAP 556
           +S A  LF +ML  GL   V + +  I  L     G  I++ G  + KL+E     G+ P
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +   YN ++ +L K   +  A ++  ++   G+ PD + Y T+I G+C L
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 271


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 234/474 (49%), Gaps = 25/474 (5%)

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L+S L       Q + L   MR  G     C    L+N L     +   F     +++R
Sbjct: 74  HLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRR 133

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G+ PNIVT N ++K LC+  +I  A+ LF  +  +G  P+VVT+ TLI   C    +  A
Sbjct: 134 GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIA 193

Query: 268 FQLYNLMM------EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA----------LD 311
            +L+  M+      E++  P++I Y+I++DGL K GR  E  +L              LD
Sbjct: 194 LKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLD 253

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           +GL+ D+V F+ ++D     G V  A +    M+  G +P++++Y+ LI+G C  G L  
Sbjct: 254 QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNS 313

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  LF  +  +  EP +++Y+ LI+G+ K+ K+ +   LY+ M+  G +P+ +    L+ 
Sbjct: 314 ARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLK 373

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           G+     + DA + F       +  N + +   +DG C+     + +KLF  +   N K 
Sbjct: 374 GIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKL 433

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           ++     LI G+   G L +A  LF ++   G  P+V+TY+ +IHG  +   +     + 
Sbjct: 434 EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 493

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           + ME NG  PDI  YN L+    +   L+  ++L  ++  + + PD IT + ++
Sbjct: 494 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 547



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 212/430 (49%), Gaps = 21/430 (4%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           +A H    +++    P++ + N +L  L          SL++ + L G   +  T + L+
Sbjct: 52  HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N  C   +L + F  +  ++     P+++ Y+ LI GL    R+ E   L L     G  
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCT 171

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG------GFLPNVISYSILIKGLCQQGRL 369
            DVV + +++    G G++  A++ +  MLN          PNVI+Y+I++ GLC+ GR 
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231

Query: 370 VEACGLF----------GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
            EA  LF           ++L + L+P ++T++ LID  CK GK+ +   L   MI+ G+
Sbjct: 232 DEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 291

Query: 420 KPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V  + LI G  ++GD   A   F         P++  +N L++G  +  +  + +K
Sbjct: 292 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 351

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L+  M +   +P+VIT+  L++GI   G +  A  LF  M   G+  +  TY   + GL 
Sbjct: 352 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLC 411

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +   + +F  ++ +    +I   N L++ L K   L+ A +LF +L++ G EP+++
Sbjct: 412 KNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVV 471

Query: 595 TYNTIICGYC 604
           TY  +I G+C
Sbjct: 472 TYTIMIHGFC 481



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 173/341 (50%), Gaps = 24/341 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIY--------LSPDLV--QRLMSCLVDSNSVG 164
           Y+ +++   ++G+ DE+ ++F  M   G+         L PD+V    L+  L     V 
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVI 277

Query: 165 QYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           +  KL   M   G       Y  L+ G    G + +A  +   +  +G  P++++ N ++
Sbjct: 278 EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 337

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
                  ++  A  L++ +LLVG +PNV+T+ +L+       K++ A +L+++M    + 
Sbjct: 338 NGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIA 397

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
            +   Y I +DGL K   L E  +L         KL++   + ++D     G +  A + 
Sbjct: 398 ENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWEL 457

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLI 395
           ++++ N G  PNV++Y+I+I G C++G++ +A      VLI+++E     P ++TY++L+
Sbjct: 458 FEKLSNEGHEPNVVTYTIMIHGFCREGQVDKA-----NVLIQKMEANGCTPDIITYNTLM 512

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
            GF +S KL +   L   M ++ + PDA+ CS++++ L  D
Sbjct: 513 RGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKD 553



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 175/367 (47%), Gaps = 22/367 (5%)

Query: 56  KWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFG 112
           ++  NC   PN+     ++  L +    D A  +F++M  Q G   N   +    L    
Sbjct: 206 RYEINC--KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQ-GMIPN--EMLDQGLQPDM 260

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLV-DSNSVGQYY 167
             ++ LI+   + GK+ E+ ++   M + GI   PDLV    L+   C+V D NS  + +
Sbjct: 261 VTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV--PDLVTYNSLIEGFCMVGDLNSARELF 318

Query: 168 KLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
               +M  KG       Y  L+NG  +   +E A  ++ +++  G  PN++T + +LK +
Sbjct: 319 ---VSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI 375

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
            + G++ +A  LF V+   G   N  T+   ++  CK   L +A +L+  +   +   ++
Sbjct: 376 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEI 435

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
              + LIDGL KAG+L+   EL     + G + +VV ++ ++  +   G V +A     +
Sbjct: 436 ENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQK 495

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M   G  P++I+Y+ L++G  +  +L E   L  ++  + + P  +T S ++D   K  K
Sbjct: 496 MEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK 555

Query: 404 LRDGFSL 410
            ++   L
Sbjct: 556 YQECLHL 562


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/634 (23%), Positives = 296/634 (46%), Gaps = 57/634 (8%)

Query: 24  KTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHN--CVSSPNIAQLI--HVLLQSDM 79
           +T  S L  +Q + IL +L + +N   A+  F    N        ++  I  HV+ +   
Sbjct: 72  QTLASVLNTHQVDQILLSL-RVDNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQ 130

Query: 80  RDVASHVFDKMVIQ--FGKTYNFFRLFRDSLGDFGCD---YSFLIENYVRIGKIDESVEI 134
                 V ++MV +   G   +   L  +S  D+  +   +  L   Y R   + +++ +
Sbjct: 131 SKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFV 190

Query: 135 FAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLR 190
            A M  + + +S      L+  L  ++ +   Y     ++  G    E+    L++GL R
Sbjct: 191 LAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYN---EIKASGVPQNEYTNPILIDGLCR 247

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
           +  +++A    R+     F P++V+ N ++   C  G +  A S F +++  G  P+V +
Sbjct: 248 QSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYS 307

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           ++ L++  C    +E+A +  N M    + PD++ Y+IL +G    G +    +++   L
Sbjct: 308 YNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRML 367

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
             GL  D+V ++ ++  +  +G++  + +  ++ML+ G   ++++Y++L+  LC+ GR+ 
Sbjct: 368 LNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           EA  L  ++ +  L+P LLTYS LI G CK G + +   LY+ M  + + P++ VCS +I
Sbjct: 428 EAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAII 487

Query: 431 NGL----------------------------------------MGDALRFFFQSVRMTLI 450
           +GL                                        +G+A+R + Q +   + 
Sbjct: 488 SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 547

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P +  FN+L+ G C+  +  + VKL   + ++ + P  +T+T L+ G   +G + S   +
Sbjct: 548 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 607

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
             +M  + + P  ITY+ ++ GL K   +   + + K M   G+ PD   YN ++    K
Sbjct: 608 LHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCK 667

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             +L  A +L  Q+    L+P  +TYN +I G C
Sbjct: 668 AHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLC 701



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 255/523 (48%), Gaps = 48/523 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ L+      G ++E++E    M + G+   PD+V    L +       +   +K+ + 
Sbjct: 308 YNILLHGLCVAGSMEEALEFTNDMENHGV--EPDIVTYNILANGFRILGLISGAWKVVQR 365

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  L+ G  + G IE +F +  +++ +G   +IVT   +L  LC +G+
Sbjct: 366 MLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGR 425

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  L   + ++G KP+++T+S LI+  CK   +E+A +LY  M    + P+  + S 
Sbjct: 426 IDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSA 485

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I GLF+ G + E      +     +  ++++++ ++D Y  +G++G AV++Y +++  G
Sbjct: 486 IISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG 545

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P +++++ LI G C++G+L EA  L   + +  L P+ +TY++L++G+C+ G +   F
Sbjct: 546 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 605

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL----------------------------------- 433
            +   M  + +KP  +  ++++ GL                                   
Sbjct: 606 DMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 665

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                +  A +   Q ++ +L P+   +N L++G C      D  +L + +   +I+   
Sbjct: 666 CKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTK 725

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           + +T +I+   ++G + +A++ F QM++RG    +  YSA+I+ L K   I+     F +
Sbjct: 726 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCM 785

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           M  +G+ PD  I  V+LN   +  + ++  ++F  +   GL P
Sbjct: 786 MLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 177/346 (51%), Gaps = 9/346 (2%)

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           + S +F+K  I   + Y F  + +  + +    Y+ +I+ Y ++G I E+V  +  + + 
Sbjct: 486 IISGLFEKGAISEAQMY-FDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEK 544

Query: 142 GIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIE 195
           GI  SP +V    L+        + +  KL   ++  G       Y  LMNG   +G + 
Sbjct: 545 GI--SPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH 602

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           + F M  ++  +   P  +T   ++K LC  G++  +  L   +   G  P+ +T++T+I
Sbjct: 603 SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 662

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
            +FCK   L+KAFQL+N M++  L P  + Y++LI+GL   G LK+ + LL+T  D+ ++
Sbjct: 663 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIR 722

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           L  V +++++ A+   GDV  A+  + +M+  GF  ++  YS +I  LC++  + +A   
Sbjct: 723 LTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFF 782

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           F  +L   + P       +++ F +SG     F ++  MIK GL P
Sbjct: 783 FCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 251/508 (49%), Gaps = 17/508 (3%)

Query: 110 DFGC-----DYSFLIENYVRIGKIDESVEIFAYMSD-MGIYLSPDLVQR--LMSCLVDSN 161
           + GC      Y+ L++ +    + +E++E+   M+D  G    P++V    +++      
Sbjct: 158 ELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEG 217

Query: 162 SVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            V + Y L   M  +G       Y  +++GL +  V++ A  + +Q+I +G  P+  T N
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYN 277

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++      G+      + + +   G KP+  T+ +L+N  C   +  +A  L++ M+  
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRK 337

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + P++ IY ILI G    G L E ++LL   ++ GL  D  +F+ +  AY     +  A
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +  +++M   G  P+V++Y  LI  LC+ GR+ +A   F Q++   + P++  ++SL+ G
Sbjct: 398 MHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPN 452
            C   K       Y  M+ +G++PD V     +C+L   G +  A R      R+   P 
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPG 517

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  + TL+ G C + R  +  K   +M    +KPD  T+  L+ G    G +  A  +F 
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +ML+ G+TP V+TYS I+HGLF  +  S    ++  M  +G   +I IYN++LN L K  
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTII 600
            +D A KLF  L  +  + +I T+N +I
Sbjct: 638 CVDEAFKLFQSLCSKDFQLEITTFNIMI 665



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 225/441 (51%), Gaps = 21/441 (4%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C Y  L+    R G +E+ F     +++ G+  N +  N++LK LC   ++  A    D+
Sbjct: 95  CTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA---MDI 151

Query: 239 LLLVGPK----PNVVTFSTLINAFCKEAKLEKAFQLYNLMME---MDLVPDLIIYSILID 291
           L+   P+    P+VV+++TL+  FC E + E+A +L ++M +       P+++ Y+I+I+
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G F  G++ +   L L  +DRG++ +VV +++V+D       V RA   + +M++ G  P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  +Y+ LI G    G+  E   +  ++    L+P   TY SL++  C +G+ R+   L+
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331

Query: 412 DNMIKRGLKPDAVVCSLLINGL--------MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           D+MI++G+KP+  +  +LI+G         M D L    ++    L P+  IFN +    
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN---GLSPDHHIFNIIFTAY 388

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            +     + + +F  M    + PDV+ +  LI  +   G +  A+L F QM+  G+ P++
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
             ++++++GL            +  M   G+ PD+  +N +L  L  +  +  A +L   
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           +   G  P +I+Y T+I G+C
Sbjct: 509 MERVGTRPGVISYTTLIGGHC 529



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/558 (26%), Positives = 244/558 (43%), Gaps = 62/558 (11%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           C YS LI  + R+G+++     F  +   G  ++  ++ +L+  L D+       +LC A
Sbjct: 95  CTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAK------RLCEA 148

Query: 173 MR-----------GKGFCVYEFLMNGLLRKGVIENAF---HMHRQVIQRGFVPNIVTCNK 218
           M                  Y  L+ G   +   E A    HM      R   PN+V+   
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAI 208

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++      GQ+  A +LF  ++  G +PNVVT++T+I+  CK   +++A  ++  M++  
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           + PD   Y+ LI G    G+ KE   +L      GLK D   + S+++     G    A 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE--------------------------- 371
             +D M+  G  PNV  Y ILI G   +G L E                           
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 372 --------ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
                   A  +F ++  + L P ++ Y +LID  CK G++ D    ++ M+  G+ P+ 
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            V + L+ GL        A  F+F+ +   + P++  FNT++   C   +     +L  L
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M     +P VI++T LI G    G +  A      ML  GL PD  TY+ ++HG  +   
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           I     +F+ M RNG+ P +  Y+ +L+ L        A +L+  +   G + +I  YN 
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 599 IICGYCSLNSCLIDGYFK 616
           I+ G  S N+C +D  FK
Sbjct: 629 ILNGL-SKNNC-VDEAFK 644



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 255/550 (46%), Gaps = 29/550 (5%)

Query: 65  PNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           PN+     +I  L ++ + D A  VF +M+ +  K  N      D+       Y+ LI  
Sbjct: 236 PNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDN------DT-------YNCLIHG 282

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF- 178
           Y+ IGK  E V +   MS  G  L PD      L++ L ++    +   L  +M  KG  
Sbjct: 283 YLSIGKWKEVVRMLEEMSAHG--LKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIK 340

Query: 179 ---CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
               +Y  L++G   KG +     +   +++ G  P+    N I         I  A  +
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F+ +   G  P+VV +  LI+A CK  +++ A   +N MM   + P++ +++ L+ GL  
Sbjct: 401 FNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCT 460

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
             + ++  E     L++G++ DVV F++++      G V +A +  D M   G  P VIS
Sbjct: 461 VDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVIS 520

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI G C  GR+ EA      +L   L+P   TY++L+ G+C++G++ D + ++  M+
Sbjct: 521 YTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREML 580

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G+ P  V  S +++GL       +A   +   +      N++I+N +++G  +     
Sbjct: 581 RNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVD 640

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  KLF  +   + + ++ T  ++I  +   G    A+ LF  +   GL PDV TY  I 
Sbjct: 641 EAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIA 700

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
             L +   +     +F  ME++G  P+  + N L+  L+   ++  A     +L ++   
Sbjct: 701 ENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFS 760

Query: 591 PDIITYNTII 600
            +  T   +I
Sbjct: 761 LEASTTAMLI 770



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 200/371 (53%), Gaps = 9/371 (2%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+  T+S LI  FC+  +LE  F  + L+++     + I+ + L+ GL  A RL E  ++
Sbjct: 92  PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151

Query: 306 LLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG---GFLPNVISYSILIK 361
           L+  +   G   DVV +++++  +        A++    M +       PNV+SY+I+I 
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G   +G++ +A  LF +++ R ++P+++TY+++IDG CK+  +     ++  MI +G+KP
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 422 DAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D    + LI+G +      + +R   +     L P+ + + +L++  C   R  +   LF
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    IKP+V  + +LI G A++G+LS    L   M++ GL+PD   ++ I     K 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             I   +H+F  M++ G++PD+  Y  L++ L K   +D A+  F Q+ + G+ P+I  +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 597 NTIICGYCSLN 607
           N+++ G C+++
Sbjct: 452 NSLVYGLCTVD 462



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 203/405 (50%), Gaps = 9/405 (2%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P+  T + ++   C  G++ +  + F ++L  G + N +  + L+   C   +L +A  
Sbjct: 91  TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150

Query: 270 -LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD---RGLKLDVVVFSSVM 325
            L   M E+   PD++ Y+ L+ G     R +E  ELL    D   R    +VV ++ V+
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVI 210

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           + +   G V +A   +  M++ G  PNV++Y+ +I GLC+   +  A G+F Q++ + ++
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA----LRFF 441
           P   TY+ LI G+   GK ++   + + M   GLKPD      L+N L  +      RF 
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330

Query: 442 FQS-VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F S +R  + PN+ I+  L+ G       ++   L  LM    + PD     ++    A 
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           +  +  A+ +F +M ++GL+PDV+ Y A+I  L K   +   +  F  M   GVAP+I +
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           +N L+  L      + A + + ++ ++G+ PD++ +NTI+C  C+
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 201/405 (49%), Gaps = 27/405 (6%)

Query: 226 NGQIG--NASSLFDVLLLVGPKPNVVTFSTLINAFCK-------EAKLEKAFQLYNLMME 276
           +G +G  +A  LFD LL      +V+ F+ L+ A  +         + E    L+N M+ 
Sbjct: 25  SGSLGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIR 84

Query: 277 ---MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
              + + PD   YSILI    + GRL+ G       L  G +++ +V + ++    G+ D
Sbjct: 85  ECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK---GLCD 141

Query: 334 VGRAVQTYD----RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI---RRLEP 386
             R  +  D    RM   G  P+V+SY+ L+KG C + R  EA  L   +     R   P
Sbjct: 142 AKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           ++++Y+ +I+GF   G++   ++L+  M+ RG++P+ V  + +I+GL     +  A   F
Sbjct: 202 NVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            Q +   + P+   +N L+ G   + +  + V++   M  + +KPD  T+  L+  + + 
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A  LF  M+++G+ P+V  Y  +IHG      +S    +  LM  NG++PD  I+
Sbjct: 322 GRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           N++     K+  +D A+ +F ++  +GL PD++ Y  +I   C L
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKL 426



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 165/318 (51%), Gaps = 22/318 (6%)

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ-QGRL 369
           +R L+L+ V+ S      +G+ D   A++ +D +L      +VI+++ L+  + +  GR 
Sbjct: 10  NRCLELERVIGSRARSGSLGLDD---ALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRR 66

Query: 370 VEAC------GLFGQVLIR---RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
                      LF +++     ++ P   TYS LI  FC+ G+L  GF+ +  ++K G +
Sbjct: 67  SSTTESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWR 126

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            + +V + L+ GL     + +A+    + +  +   P++  +NTL+ G C  KRA + ++
Sbjct: 127 VNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALE 186

Query: 475 LFMLMG---MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
           L  +M      +  P+V+++ ++I G  ++G +  A  LF +M+ RG+ P+V+TY+ +I 
Sbjct: 187 LLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL K + +     +F+ M   GV PD   YN L++  +        +++  +++  GL+P
Sbjct: 247 GLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306

Query: 592 DIITYNTIICGYCSLNSC 609
           D  TY +++   C+   C
Sbjct: 307 DCYTYGSLLNYLCNNGRC 324



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/408 (22%), Positives = 169/408 (41%), Gaps = 56/408 (13%)

Query: 79  MRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM 138
           M D A H+F+KM  Q              L     +Y  LI+   ++G++D++V  F  M
Sbjct: 393 MIDEAMHIFNKMKQQ-------------GLSPDVVNYGALIDALCKLGRVDDAVLKFNQM 439

Query: 139 SDMG----IYLSPDLVQRLMSCLVDS-NSVGQYY--------------------KLC--- 170
            + G    I++   LV  L  C VD      ++Y                     LC   
Sbjct: 440 MNEGVAPNIFVFNSLVYGL--CTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497

Query: 171 RAMRGK-------------GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           + M+ +             G   Y  L+ G    G I+ A      ++  G  P+  T N
Sbjct: 498 QVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            +L   C  G+I +A  +F  +L  G  P VVT+ST+++      +  +A +LY  M+  
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
               ++ IY+I+++GL K   + E  +L  +   +  +L++  F+ ++ A    G    A
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +  +  + + G +P+V +Y ++ + L ++G L E   LF  +      P+    ++L+  
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
               G +    +    + ++    +A   ++LI+ L  D       S+
Sbjct: 738 LLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 247/486 (50%), Gaps = 9/486 (1%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLM-- 185
           ID++V +F ++ +M    S      ++  +V          L + M  KG     F +  
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 186 --NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
             N     G +  AF +   V++RG+ PN +T   ++K LCING++  A    D +   G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
              + V + TLIN  CK  +   AFQL   M    + P+++IY+++ID   K     +  
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L L  +D G+  D++ ++S++  +   G  G   Q    M+N    PNV ++++LI   
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G+++EA G+F  ++ R  +P ++T+++LI G C  G + +   L+D + +RG+ PD 
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              ++LI G      + +A+  F +     ++ ++ ++++L+DG C+  R +   +LF  
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +      P+VIT+ +LI        +   I LF  M  +GLTP V+TY+ +I+G  K K 
Sbjct: 425 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKR 484

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           I   +++  +M+   +APD   YN L + L K   +  A +LF  +   G   D+ TYN 
Sbjct: 485 IREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNV 544

Query: 599 IICGYC 604
           ++  +C
Sbjct: 545 LLDAFC 550



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 192/365 (52%), Gaps = 5/365 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+NGL + G   +AF + +++  +   PNIV  N I+   C +     A  L+  ++
Sbjct: 192 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 251

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +G  P+++T+++LI  FC+  +  +  QL   M+  ++ P++  +++LID   + G++ 
Sbjct: 252 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 311

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   +    + RG + D+V F++++  +   G+V  A + +D +   G LP+V SY+ILI
Sbjct: 312 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 371

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+  R+ EA  LF ++  + +   ++ YSSLIDG CKSG++   + L+  +   G  
Sbjct: 372 IGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPP 431

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ +  ++LI+       +   +  F       L P +  +N L++G C+ KR  + + L
Sbjct: 432 PNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNL 491

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
             +M   N+ PD IT+  L  G+   G +S A  LF  M   G   DV TY+ ++    K
Sbjct: 492 LSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551

Query: 536 GKNIS 540
            ++++
Sbjct: 552 AQDVA 556



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 193/383 (50%), Gaps = 5/383 (1%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +A +LF+ L+ + P P+V+ F+T+I +  K      A  L   M+   + P +   SI
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            I+     G +     +L   L RG + + +  ++VM      G+V +A+  +D +   G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            L + + Y  LI GLC+ GR ++A  L  ++  + ++P+++ Y+ +ID FCK        
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            LY  ++  G+ PD +  + LI G       G+  +   + V   + PN++ FN L+D  
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           CR  +  +   +F LM     +PD++T   LI G    G++  A  LF  + +RG+ PDV
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            +Y+ +I G  K K I   + +F  M    +  DI +Y+ L++ L K   +  A +LF  
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + + G  P++ITYN +I  +C +
Sbjct: 425 INNDGPPPNVITYNILIDAFCKI 447



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           + G++ + F+L ++  G         Y+ +I+++ +     ++ +++  + DMGI   PD
Sbjct: 201 KIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGI--DPD 258

Query: 149 LVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFC--VYEF--LMNGLLRKGVIENAFHMHR 202
           ++    L+     +   G+  +L   M  K     VY F  L++   RKG +  A  M  
Sbjct: 259 ILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFN 318

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            +++RG  P+IVT N ++   C++G +  A  LFD +   G  P+V +++ LI  +CK  
Sbjct: 319 LMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCK 378

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           ++++A  L+N M   ++V D+++YS LIDGL K+GR+    EL  T  + G   +V+ ++
Sbjct: 379 RIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYN 438

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            ++DA+  I D+   ++ +  M   G  P V++Y+ILI G C+  R+ EA  L   +  +
Sbjct: 439 ILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSK 498

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L P  +TY+SL DG CKSG++ D + L+  M   G   D    ++L++  
Sbjct: 499 NLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAF 549



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 129/257 (50%), Gaps = 8/257 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ LI+ + R GK+ E+  +F  M   G    PD+V    L+S      +V +  KL   
Sbjct: 297 FNVLIDAFCRKGKMIEAQGMFNLMVKRG--QQPDIVTFNTLISGHCLHGNVLEARKLFDT 354

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  +G       Y  L+ G  +   I+ A  +  ++  +  V +IV  + ++  LC +G+
Sbjct: 355 VFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGR 414

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  LF  +   GP PNV+T++ LI+AFCK   ++   +L+ LM    L P ++ Y+I
Sbjct: 415 ISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNI 474

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+G  K+ R++E   LL     + L  D + ++S+ D     G +  A + +  M  GG
Sbjct: 475 LINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGG 534

Query: 349 FLPNVISYSILIKGLCQ 365
              +V +Y++L+   C+
Sbjct: 535 PPVDVATYNVLLDAFCK 551



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 31/221 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  Y +  +IDE+V +F  M    + L  D+V                        
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVL--DIV------------------------ 400

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                +Y  L++GL + G I  A+ +   +   G  PN++T N ++   C    I     
Sbjct: 401 -----LYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIE 455

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF ++   G  P V+T++ LIN +CK  ++ +A  L ++M   +L PD I Y+ L DGL 
Sbjct: 456 LFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLC 515

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           K+GR+ +  EL       G  +DV  ++ ++DA+    DV 
Sbjct: 516 KSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 556



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%)

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           ++S   +  A+ LF  ++     P VI ++ II  + K K+  V + + K M   GV P 
Sbjct: 59  LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 118

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           I   ++ +N       +  A  + G +  RG +P+ IT  T++ G C
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLC 165


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 150/495 (30%), Positives = 237/495 (47%), Gaps = 22/495 (4%)

Query: 97  TYNFFRLFRDS---LGDFGCDYSFLIENYV-------RIGKIDESVEIFAYMSDMGIYLS 146
           T + FRL   S   +  F C +  L E          R GK   S    + +   G + S
Sbjct: 95  TQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQS 154

Query: 147 PDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHR 202
             +   LM+   DS       +  R +R       F    +L + L++  +   A+  + 
Sbjct: 155 NLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYE 214

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +++  G+ P++   N ++ RLC   +I  A  LF  +   G +P VV+F+TLIN +CK  
Sbjct: 215 EILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSG 274

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L++ F+L   MME  + PD+  YS+LI+GL K G+L + N+L L   DRGL  + V F+
Sbjct: 275 NLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFT 334

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           ++++ +   G     ++ Y +ML  G  P+VI+Y+ LI GLC+ G L EA  L  ++  R
Sbjct: 335 TLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR 394

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DA 437
            L+P   TY+ LIDG CK G L     +   M+K G++ D V  + LI+G        +A
Sbjct: 395 GLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEA 454

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            R   + +   + P+   +  ++ G C+        KL   M      P V+T+ VL+ G
Sbjct: 455 ERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNG 514

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +  QG + +A +L   ML  G+ PD ITY+ ++ G  K  N        KL    G+  D
Sbjct: 515 LCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRE---DFDKLQSEKGLVQD 571

Query: 558 IAIYNVLLNMLIKEC 572
              Y  L+  L K C
Sbjct: 572 YGSYTSLIGDLRKTC 586



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 188/343 (54%), Gaps = 5/343 (1%)

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A+  Y  +++    PD+  +++L+  L K  ++ E   L      RGL+  VV F+++++
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y   G++ +  +    M+     P+V +YS+LI GLC++G+L +A  LF ++  R L P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFF 441
           + +T+++LI+G C +G+   G  +Y  M+++G+KPD +  + LINGL  +GD   A +  
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +  +  L P+ F +  L+DGCC+       +++   M    I+ D +  T LI G   +
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCRE 448

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +  A     +ML+ G+ PD  TY+ +IHG  K  ++  G  + K M+ +G  P +  Y
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTY 508

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           NVLLN L K+  +  A  L   + + G+ PD ITYN ++ G+C
Sbjct: 509 NVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHC 551



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 208/426 (48%), Gaps = 8/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  LMN     G   +A    R V +        +C  +  RL        A + ++ +
Sbjct: 157 VFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEI 216

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G  P+V  F+ L++  CKE K+ +A  L+  + +  L P ++ ++ LI+G  K+G L
Sbjct: 217 LDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNL 276

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +G  L    ++  +  DV  +S +++     G +  A + +  M + G +PN ++++ L
Sbjct: 277 DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C  GR      ++ Q+L + ++P ++TY++LI+G CK G LR+   L   M +RGL
Sbjct: 337 INGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGL 396

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KPD    ++LI+G    GD   AL    + V+  +  +   F  L+ G CR  +  +  +
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
               M    IKPD  T+T++I G   +G + +   L  +M   G  P V+TY+ +++GL 
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC 516

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +     +   M   GV PD   YN+LL    K  N +   KL    +++GL  D  
Sbjct: 517 KQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL---QSEKGLVQDYG 573

Query: 595 TYNTII 600
           +Y ++I
Sbjct: 574 SYTSLI 579



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 173/326 (53%), Gaps = 5/326 (1%)

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           +++S+L++    +G   +  +         L++       + D  + +     A   Y+ 
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           +L+ G+ P+V  +++L+  LC++ ++ EA  LFG++  R L P+++++++LI+G+CKSG 
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           L  GF L   M++  + PD    S+LINGL     + DA + F +     L+PN   F T
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L++G C   RA   ++++  M    +KPDVIT+  LI G+   G L  A  L  +M +RG
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           L PD  TY+ +I G  K  ++   L + K M + G+  D   +  L++   +E  +  A 
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYC 604
           +   ++ + G++PD  TY  +I G+C
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFC 481



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 197/409 (48%), Gaps = 41/409 (10%)

Query: 24  KTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVA 83
           + H   + F+    +   L+K N  +PA  F++   +C   P++ +  +VL+    R   
Sbjct: 182 RKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKF-NVLMH---RLCK 237

Query: 84  SHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGI 143
            H  ++  + FG+     R  R ++  F    + LI  Y + G +D+   +  +M +  +
Sbjct: 238 EHKINEAQLLFGEIGK--RGLRPTVVSF----NTLINGYCKSGNLDQGFRLKRFMMENRV 291

Query: 144 YLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQ 203
           +  PD+                               Y  L+NGL ++G +++A  +  +
Sbjct: 292 F--PDVF-----------------------------TYSVLINGLCKEGQLDDANKLFLE 320

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +  RG VPN VT   ++   C+ G+      ++  +L  G KP+V+T++TLIN  CK   
Sbjct: 321 MCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L +A +L   M +  L PD   Y++LIDG  K G L+   E+    +  G++LD V F++
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++  +   G V  A +T   ML  G  P+  +Y+++I G C++G +     L  ++    
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             P ++TY+ L++G CK G++++   L D M+  G+ PD +  ++L+ G
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEG 549



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 122/280 (43%), Gaps = 22/280 (7%)

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-----------------LEPSLLTY 391
           F  ++ SY  +   LC    L EA  L   V+ R+                    S L +
Sbjct: 99  FRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVF 158

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVR 446
           S L++ +  SG   D    +  + K  L+     C  L + LM       A  F+ + + 
Sbjct: 159 SVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILD 218

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
               P++  FN LM   C+  +  +   LF  +G   ++P V++   LI G    G+L  
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQ 278

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
              L   M++  + PDV TYS +I+GL K   +     +F  M   G+ P+   +  L+N
Sbjct: 279 GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
                   D  ++++ Q+  +G++PD+ITYNT+I G C +
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKV 378


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 232/443 (52%), Gaps = 21/443 (4%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI--------------- 225
           Y  ++NGL ++G ++ A+ +  +++ +GF PNIVT N ++  LC                
Sbjct: 142 YNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMF 201

Query: 226 -NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             GQ+  A  L   +   G +P+VVT+S LI+ +CK  +  +A  +++ M+     PD  
Sbjct: 202 DKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAY 261

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y  L+ G    G L + ++LL   +  G+ L+  VF+ ++ AY     + +A+  +  M
Sbjct: 262 TYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEM 321

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
              GF PNV++Y+ +I  LC+ GR+ +A   F Q++   L P ++T++SLI G C  G+ 
Sbjct: 322 RQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEW 381

Query: 405 RDGFSLYDNMIKRGLKPDA-----VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           +    L   MI RG+ P+A     ++ SL   G + +A  FF Q + + + P++  +  L
Sbjct: 382 KKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTIL 441

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG C   +  +++KL   M    ++PD +T++ L+ G    G +  A+ L+ +M  + +
Sbjct: 442 IDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDV 501

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P+ ITY+ I+HGLF    +      +  +  +G+   I  YN++L  L +   +D AL+
Sbjct: 502 KPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALR 561

Query: 580 LFGQLTDRGLEPDIITYNTIICG 602
           +F  L  +  + ++ T+N +I G
Sbjct: 562 MFQGLRSKEFQLEVRTFNIMIVG 584



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 210/416 (50%), Gaps = 21/416 (5%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK---------- 260
           PN+++ N ++  L   G++  A +LF  +L  G  PN+VT++++I+  CK          
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 261 ------EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
                 + +LE+A +L   M    L PD++ YS+LID   K GR  E   +  + + RG 
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             D   + +++  Y   G +         M+  G       ++ILI+   +   L +A  
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
            F ++  +   P+++TY+++ID  CK+G++ D  S +  M+  GL PD +  + LI+GL 
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376

Query: 434 -MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
            +G+     +  F+ +   + PN    NT+MD  C+  R  +    F  +    +KPDV+
Sbjct: 377 TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVV 436

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           ++T+LI G    G +  +I L  +M+  GL PD +TYSA+++G  K   +   L +++ M
Sbjct: 437 SYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM 496

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
               V P+   YN++L+ L     + AA + + ++ D G++  I TYN ++ G C 
Sbjct: 497 FSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCE 552



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 255/554 (46%), Gaps = 44/554 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVI 92
           N ++  L K      A   F         PNI     +I  L ++   D A  V  +M  
Sbjct: 143 NMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFD 202

Query: 93  QFGKTYNFFRLFRD-SLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           + G+     RL +  S G    D   YS LI+ Y +IG+  E+  IF  M   G   +PD
Sbjct: 203 K-GQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRG--QNPD 259

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
                                           Y  L++G   KG + +   +   +IQ G
Sbjct: 260 AY-----------------------------TYRTLLHGYATKGALVDMHDLLALMIQDG 290

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
                   N +++    N  +  A + F  +   G  PNVVT++T+I+  CK  ++E A 
Sbjct: 291 IPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAV 350

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
             ++ M+   L PD+I ++ LI GL   G  K+  +L    ++RG+  + +  +++MD+ 
Sbjct: 351 SHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSL 410

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G V  A   +D++++ G  P+V+SY+ILI G C  G++ E+  L G+++   L P  
Sbjct: 411 CKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDN 470

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQ 443
           +TYS+L++G+CK+G++ D  +LY  M  + +KP+A+  +++++GL        A  F+ +
Sbjct: 471 VTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMK 530

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            V   +   +  +N ++ G C      + +++F  +     + +V T  ++I G+   G 
Sbjct: 531 IVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGR 590

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A  LF  +L  GL PD I Y  +I    +   +     +F  ME+NG   +    N 
Sbjct: 591 IGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNA 650

Query: 564 LLNMLIKECNLDAA 577
           ++  L+++ ++  A
Sbjct: 651 IVRKLLEKGDVRRA 664



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 138/290 (47%), Gaps = 21/290 (7%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS--------- 401
           PNV+SY+++I GL ++G + +A  LF ++L +   P+++TY+S+IDG CK+         
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 402 -------GKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTL 449
                  G+L +   L   M   GL+PD V  SLLI+     G   +A   F   VR   
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            P+ + + TL+ G        D   L  LM    I  +     +LIR  A   +L  A+ 
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
            F +M ++G +P+V+TY+ +I  L K   +   +  F  M   G++PDI  +  L++ L 
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
                    KL  ++ +RG+ P+ I  NTI+   C     L    F  QI
Sbjct: 377 TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQI 426



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 70/128 (54%), Gaps = 19/128 (14%)

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
           YN  P+V+++ ++I G+  +G +  A  LF +ML +G  P+++TY+++I GL K +    
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQ---- 188

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
                        A D A    +L  +  +  L+ A++L  +++  GL+PD++TY+ +I 
Sbjct: 189 -------------AMDKA--EAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLID 233

Query: 602 GYCSLNSC 609
            YC +  C
Sbjct: 234 YYCKIGRC 241


>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
 gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
          Length = 854

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 232/468 (49%), Gaps = 42/468 (8%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C Y  LM G    G  E+AF++  ++   G  P IVT N ++  LC  G++  A  LFD 
Sbjct: 262 CSYNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDE 321

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK--- 295
           +L  G + N +TF+ LI+ + K  ++E A      M  M L+PD   ++IL  G +K   
Sbjct: 322 MLQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGK 381

Query: 296 ---------------------------------AGRLKEGNELLLTALDRGLKLDVVVFS 322
                                             GRL +  ELL +A+++G+++ V  F+
Sbjct: 382 AALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFN 441

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++ AY   G    A + Y  M   G  P+  + + LI GLC +GRL +A  LF + ++R
Sbjct: 442 ALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQA-RLFLEYMVR 500

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
                + +++  +D   ++G +      +D+M   GL+PD V  S  +NGL     + +A
Sbjct: 501 MGYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEA 560

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
              F + +R  L+PN F +N+L+   CR    ++ +KL   M    + PD+ T  +LI G
Sbjct: 561 YNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDG 620

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
              +G L++A  LFF M   GLTPDV+TY+ +++   + K+I+  +     M  +G  PD
Sbjct: 621 FCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPD 680

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           I  YN+ ++ L     L+ A+ L  +L      P+ +TYNT++ G CS
Sbjct: 681 IFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGICS 728



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 217/514 (42%), Gaps = 79/514 (15%)

Query: 169 LCRAMRGKG--FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            C   RG+   +      ++  L  G+ + A  +  +V + G  P++     +L+ L   
Sbjct: 145 FCEGFRGRSGRYAARRLALHAFLAAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRG 204

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE------------------------- 261
           G++  A  +F+ +   GP+PN+  F+ +I   C                           
Sbjct: 205 GEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSY 264

Query: 262 ----------AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
                      + E AF L++ M      P ++ Y+IL++ L + GR+ E   L    L 
Sbjct: 265 NILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQ 324

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG--------- 362
            G++++ + F+ ++D Y   G +  A      M   G +P+  +++IL  G         
Sbjct: 325 AGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAAL 384

Query: 363 ---------------------------LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
                                      LC  GRL +A  L    + + ++ S+  +++LI
Sbjct: 385 FVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALI 444

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQS-VRMTLI 450
             + K G   + F LY  M K GL P +   + LI GL      D  R F +  VRM   
Sbjct: 445 AAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGYC 504

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
             +  F   +D   R       +K +  M +  ++PD +  +  + G+     L  A   
Sbjct: 505 V-IASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNG 563

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F +M++RGL P+  TY+++I    +  N+S  L + + M ++G+ PDI   N+L++   +
Sbjct: 564 FIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCR 623

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           E  L+ A  LF  +   GL PD++TYNT++  YC
Sbjct: 624 EGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYC 657



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 151/349 (43%), Gaps = 47/349 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI  Y + G  +E+ E++  M+ +G+  S   +  L+  L +   + Q       M 
Sbjct: 440 FNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMV 499

Query: 175 GKGFCV---YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
             G+CV   +   ++   R G +  A      +   G  P+ V  +  +  LC    +  
Sbjct: 500 RMGYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDE 559

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A + F  ++  G  PN  T+++LI+AFC+   + +A +L   M +  LVPD+   +ILID
Sbjct: 560 AYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILID 619

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G  + G L   N L       GL  DVV ++++++AY    D+  A+   ++ML  G  P
Sbjct: 620 GFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEP 679

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG-------------- 397
           ++ +Y+I +  LC    L  A  L  ++      P+ +TY++L+DG              
Sbjct: 680 DIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGICSDVLDRAMILTG 739

Query: 398 --------------------FCKSG----------KLRDGFSLYDNMIK 416
                               FCK+G          KLRD    +D+  +
Sbjct: 740 RLIKLAFQPNTVTINILFSHFCKNGFGKRALVWAEKLRDDSFNFDDATR 788



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 148/345 (42%), Gaps = 41/345 (11%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VY 181
           G++D++ E+     + G+ +S      L++         + ++L + M   G        
Sbjct: 416 GRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTL 475

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
            +L+ GL  +G ++ A      +++ G+   I +    L      G +  A   +D + +
Sbjct: 476 NYLIMGLCNRGRLDQARLFLEYMVRMGYCV-IASFTIYLDSSFRAGDVLGALKCWDDMKI 534

Query: 242 VGPKPNVVTFSTLIN-----------------------------------AFCKEAKLEK 266
           VG +P+ V FS  +N                                   AFC+   + +
Sbjct: 535 VGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSE 594

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A +L   M +  LVPD+   +ILIDG  + G L   N L       GL  DVV ++++++
Sbjct: 595 ALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLN 654

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           AY    D+  A+   ++ML  G  P++ +Y+I +  LC    L  A  L  ++      P
Sbjct: 655 AYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAP 714

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           + +TY++L+DG C S  L     L   +IK   +P+ V  ++L +
Sbjct: 715 NSVTYNTLMDGIC-SDVLDRAMILTGRLIKLAFQPNTVTINILFS 758


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 249/510 (48%), Gaps = 9/510 (1%)

Query: 95  GKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM 154
           G   +F R+ R        D++ L+ +  ++      + +   M   GI  +   +  L+
Sbjct: 44  GAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILI 103

Query: 155 SCLVDSNSVGQYY----KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
           +     N VG  +    K+ +         +  L+ G+  +G I  A H+  ++I  GF 
Sbjct: 104 NSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFR 163

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P++VT   ++  LC  G    A  L   ++    +PNV  ++T+I++ CK+ ++ +AF L
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 223

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           ++ M+   + PD+  Y+ LI  L      K    LL   +D  +  DVV F++V+DA   
Sbjct: 224 FSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK 283

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G V  A    D+M+  G  PNV++Y+ L+ G C    + EA  +F  ++ +   P++++
Sbjct: 284 EGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVIS 343

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           Y++LI+G+CK  ++     L+  M ++ L PD V  S LI+GL     + DA+  F + V
Sbjct: 344 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 403

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
             + IPNL  +  L+D  C+ +   + + L   +   N+ PD+  + + I G+   G L 
Sbjct: 404 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 463

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           +A  LF  +  +GL PDV TYS +I+GL +   +     +F+ M+ NG   +  IYN + 
Sbjct: 464 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 523

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              ++      A++L  ++  RG   D  T
Sbjct: 524 RGFLRNNETSRAIQLLQEMVARGFSADAST 553



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 221/410 (53%), Gaps = 5/410 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +  Q+   G  PNI T + ++   C   ++G A S+   +L +G +P+  TF+TLI    
Sbjct: 83  LSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIY 142

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            E K+ +A  L++ M+     PD++ Y  LI+GL K G       LL + + +  + +V 
Sbjct: 143 VEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVF 202

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            +++++D+      V  A   +  M+  G  P++ +Y+ LI  LC          L  ++
Sbjct: 203 AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
           +  ++ P ++++++++D  CK GK+ +   + D MI+RG++P+ V  + L++G      M
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++ F   V    +PN+  +NTL++G C+++R    + LF  M    + PD +T++ L
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 382

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+     L  AI LF +M+     P+++TY  ++  L K + ++  + + K +E + +
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            PDI + N+ ++ + +   L+AA  LF  L+ +GL+PD+ TY+ +I G C
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC 492



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 221/412 (53%), Gaps = 5/412 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +  ++++ G  P+  T   +++ + + G+IG A  LFD ++  G +P+VVT+ TLIN
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLIN 174

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK      A +L   M++ +  P++  Y+ +ID L K  ++ E   L    + +G+  
Sbjct: 175 GLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP 234

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D+  ++S++ A   + +        + M++   +P+V+S++ ++  LC++G++ EA  + 
Sbjct: 235 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVV 294

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            +++ R +EP+++TY++L+DG C   ++ +   ++D M+ +G  P+ +  + LING    
Sbjct: 295 DKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 354

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             +  A+  F +  R  LIP+   ++TL+ G C ++R  D + LF  M   +  P+++T+
Sbjct: 355 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 414

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L+  +     L+ A+ L   +    L PD+   +  I G+ +   +     +F  +  
Sbjct: 415 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 474

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            G+ PD+  Y++++N L +   LD A KLF ++ + G   +   YNTI  G+
Sbjct: 475 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGF 526



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 132/264 (50%), Gaps = 5/264 (1%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PN+ +  ILI   C   R+  A  +  ++L    +P   T+++LI G    GK+ + 
Sbjct: 91  GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEA 150

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+D MI  G +PD V    LINGL        A+R     V+    PN+F +NT++D 
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+ ++ T+   LF  M    I PD+ T+  LI  + +         L  +M+   + PD
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V++++ ++  L K   ++    +   M + GV P++  Y  L++       +D A+K+F 
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330

Query: 583 QLTDRGLEPDIITYNTIICGYCSL 606
            +  +G  P++I+YNT+I GYC +
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKI 354



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 1/178 (0%)

Query: 427 SLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           SL  N + G A+  F + +RM   P+   FN L+    ++K  +  + L   M  + I P
Sbjct: 36  SLHFNTIDG-AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP 94

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           ++ T  +LI        +  A  +  ++LK G  PD  T++ +I G++    I   LH+F
Sbjct: 95  NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLF 154

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             M   G  PD+  Y  L+N L K  N  AA++L G +  +  +P++  YNTII   C
Sbjct: 155 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLC 212



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 54/121 (44%)

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P  +    L+  IA     S+ + L  QM   G+ P++ T   +I+       +     +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
              + + G  PD A +  L+  +  E  +  AL LF ++   G  PD++TY T+I G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 606 L 606
           +
Sbjct: 179 V 179


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 271/553 (49%), Gaps = 28/553 (5%)

Query: 62  VSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           V +  + QLI  L      D A  +  + + + G T + F             Y+ LI+ 
Sbjct: 127 VQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVF------------SYNALIKG 174

Query: 122 YVRIGKIDESVEIFAYMS-DMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLCRAMRGK 176
                K  E++E+  +M+ D G   SP++V    S ++D       V + Y L   M G+
Sbjct: 175 LCVEKKSQEALELLLHMTADGGYNCSPNVVS--YSTIIDGFFKEGEVDKAYFLFDEMIGQ 232

Query: 177 GF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           GF      Y  L++GL +   +  A  + + +  +G +PN  T N +++  C  GQ+  A
Sbjct: 233 GFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEA 292

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             L   +   G +P+VVT+  LI  +CK  +  +A  +++ M+     P+  IY IL+ G
Sbjct: 293 VRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 352

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
               G L +  +LL   +  G+  +   F+ ++ AY   G V +A+  +  M   G  P+
Sbjct: 353 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 412

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V+SYS +I  LC+ GR+ +A   F Q++   L P++++++SLI G C  G+ +    L  
Sbjct: 413 VVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 472

Query: 413 NMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            MI RG+ PDA+  + +++     G + +A  FF   + + + PN+  +NTL+DG C + 
Sbjct: 473 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVG 532

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  +++K F  M    ++PD  T+  L+ G    G +  A+ L+ +M ++ +    IT +
Sbjct: 533 KMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSN 592

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            I+HGLF+   I     ++  M   G    I  YN +L  L +   +D AL++F  L  +
Sbjct: 593 IILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 652

Query: 588 GLEPDIITYNTII 600
             E D+ T+N +I
Sbjct: 653 EFELDVWTFNIVI 665



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/538 (25%), Positives = 258/538 (47%), Gaps = 46/538 (8%)

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           +  H+FDK V+   +TYN                  +I  Y  +G+++E+V +   MS  
Sbjct: 260 ILQHMFDKGVMPNTRTYNI-----------------MIRGYCSLGQLEEAVRLLKKMSGS 302

Query: 142 GIYLSPDLVQRLM----SCLVD--SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIE 195
           G  L PD+V  ++     C +   + +   +  + R  +     +Y  L++G   KG + 
Sbjct: 303 G--LQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALI 360

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           +   +   +I+ G        N ++     +G +  A + F  +   G +P+VV++ST+I
Sbjct: 361 DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVI 420

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +  CK  ++E A   +N M+   L P++I ++ LI GL   G  K+  EL    ++RG+ 
Sbjct: 421 HILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIH 480

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D +  +++MD     G V  A   +D +++ G  PNV+SY+ LI G C  G++ E+   
Sbjct: 481 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQ 540

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
           F +++   L P   TY++L++G+ K+G++ D  +LY  M ++ +K  A+  +++++GL  
Sbjct: 541 FDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGL-- 598

Query: 436 DALRFFFQSVRMTLIPNLFI-------------FNTLMDGCCRLKRATDTVKLFMLMGMY 482
                 FQ+ R+     L++             +NT++ G C      + +++F  +   
Sbjct: 599 ------FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 652

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
             + DV T  ++I  +   G +  A  LF  M+ RG  P VITYS +I    +   +   
Sbjct: 653 EFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEES 712

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             +F  ME+NG A D  + NV++  L+++ ++  A     ++ ++    +  T   +I
Sbjct: 713 DDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 122/225 (54%), Gaps = 9/225 (4%)

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV-RM 447
           LI  FC  G+L   F+ +   +K G +   V  + LI GL       DA+   F+ +  +
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM---GMYNIKPDVITHTVLIRGIASQGSL 504
              P++F +N L+ G C  K++ + ++L + M   G YN  P+V++++ +I G   +G +
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  LF +M+ +G  PDV+TYS++I GL K + ++    + + M   GV P+   YN++
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           +        L+ A++L  +++  GL+PD++TY  +I  YC +  C
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRC 324



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 141/304 (46%), Gaps = 46/304 (15%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQ---------------VLIRRL-------- 384
           G+    ++ + LIKGLC   R  +A  +  +                LI+ L        
Sbjct: 124 GWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQE 183

Query: 385 ----------------EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
                            P++++YS++IDGF K G++   + L+D MI +G  PD V  S 
Sbjct: 184 ALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSS 243

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LI+GL     M  A           ++PN   +N ++ G C L +  + V+L   M    
Sbjct: 244 LIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 303

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG-LFKGKNISVG 542
           ++PDV+T+ +LI+     G  + A  +F  M+++G  P+   Y  ++HG   KG  I V 
Sbjct: 304 LQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDV- 362

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +  LM R+G+  +   +N+L+    K   +D A+  F ++   GL PD+++Y+T+I  
Sbjct: 363 RDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHI 422

Query: 603 YCSL 606
            C +
Sbjct: 423 LCKI 426


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 166/622 (26%), Positives = 284/622 (45%), Gaps = 90/622 (14%)

Query: 4   KFKNLLTVWRSINKCYCSESK-----THISDLQFNQANAILANLIKTNNPTPAIQ----- 53
           K  N  T + S N  Y + +        IS L   Q  + L  ++K  NP+  +Q     
Sbjct: 24  KLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNS 83

Query: 54  ---------FFKWTHNCVSS-PNIAQ---LIHVLLQSDMRDVASHVFDKMVIQFGKTYNF 100
                    +FKWT     +  N+ Q   L+H+L  +                  K YN 
Sbjct: 84  EAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANA------------------KNYNK 125

Query: 101 FRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
            R   DS       YS              +  IF  +S +G +           C   +
Sbjct: 126 IRALLDSFAK-NAHYS--------------NSTIFHSLSVLGSW----------GC---A 157

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           NS+                + + L+   ++ G ++ A     +    GF  + ++CN +L
Sbjct: 158 NSI----------------IVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPML 201

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             L   G+IG   S++  ++      NVVTF  +IN  CK  K +KA  +   M      
Sbjct: 202 VSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFS 261

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P +I Y+ +IDG  KAG++ + + LL   + + +  + + F+ ++D +    +V  A + 
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           ++ M   G  PNV++Y+ LI GLC  G+L EA GL  ++    L+P+++TY++LI+GFCK
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFI 455
              L++   + D++ KRGL P+ +  + LI+     G M DA       +   + PN+  
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N L+ G CR     +  KL   M    +K D++T+ +L+  +  +G    A+ L  +M 
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMF 501

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           + GL P  +TY+A+I G F+  N +  L++  LME+ G   +I  YNVL+     +  L+
Sbjct: 502 EVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLE 561

Query: 576 AALKLFGQLTDRGLEPDIITYN 597
            A +L  ++ ++GL P+  TY+
Sbjct: 562 EANRLLNEMLEKGLIPNRTTYD 583



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 207/419 (49%), Gaps = 8/419 (1%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK--PNVV 249
           G I N     R +       N      +L     N    N S++F  L ++G     N +
Sbjct: 102 GAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSN-STIFHSLSVLGSWGCANSI 160

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
               L+ A+ K  +++ A + ++   +       +  + ++  L K GR+     +    
Sbjct: 161 IVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEM 220

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           + R + ++VV F  V++    +G   +A    + M   GF P+VI+Y+ +I G C+ G++
Sbjct: 221 IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKM 280

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  L  +++ +R+ P+ +T++ LIDGFC+   +     +++ M ++GL+P+ V  + L
Sbjct: 281 FKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340

Query: 430 INGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           INGL     + +AL    +   M L PN+  +N L++G C+ K   +  ++   +G   +
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            P+VIT   LI      G +  A LL   ML  G+ P+V TY+ +I G  +  N+     
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           + K ME NG+  D+  YN+L++ L K+     A++L  ++ + GL P  +TYN +I GY
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGY 519



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 195/385 (50%), Gaps = 5/385 (1%)

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           NG++  A   FD     G + + ++ + ++ +  KE ++     +Y  M+   +  +++ 
Sbjct: 172 NGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVT 231

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           + ++I+GL K G+ ++  +++      G    V+ +++++D Y   G + +A      M+
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
                PN I+++ILI G C+   +  A  +F ++  + L+P+++TY+SLI+G C +GKL 
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLM 460
           +   L D M   GLKP+ V  + LING     ++ +A        +  L PN+  FNTL+
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           D   +  R  D   L  +M    + P+V T+  LI G   +G++  A  L  +M   GL 
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
            D++TY+ ++  L K       + +   M   G+ P    YN L++   +E N  AAL +
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNV 531

Query: 581 FGQLTDRGLEPDIITYNTIICGYCS 605
              +  +G   +I+TYN +I G+C+
Sbjct: 532 RTLMEKKGRRANIVTYNVLIKGFCN 556



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 6/384 (1%)

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL-VPDLII 285
           G I N      +L L+    N      L+++F K A    +   ++L +       + II
Sbjct: 102 GAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSII 161

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
             +L+    K G +    E    A D G +L  +  + ++ + V  G +G     Y  M+
Sbjct: 162 VDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMI 221

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
                 NV+++ ++I GLC+ G+  +A  +   +      PS++TY+++IDG+CK+GK+ 
Sbjct: 222 RRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMF 281

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLM 460
              +L   M+ + + P+ +  ++LI+G   D     A + F +  R  L PN+  +N+L+
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLI 341

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +G C   +  + + L   M    +KP+V+T+  LI G   +  L  A  +   + KRGL 
Sbjct: 342 NGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLA 401

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+VIT++ +I    K   +     +  +M   GV P+++ YN L+    +E N+  A KL
Sbjct: 402 PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL 461

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
             ++   GL+ D++TYN ++   C
Sbjct: 462 AKEMEGNGLKADLVTYNILVDALC 485



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 12/276 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  + R  L      Y+ LI      GK+DE++ +   MS MG  L P++V    + L++
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG--LKPNVVT--YNALIN 377

Query: 160 SNSVGQYYKLCRAM------RGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVP 211
                +  K  R M      RG    V  F  L++   + G +++AF +   ++  G  P
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           N+ T N ++   C  G +  A  L   +   G K ++VT++ L++A CK+ +  KA +L 
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           + M E+ L P  + Y+ LIDG F+ G       +      +G + ++V ++ ++  +   
Sbjct: 498 DEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNK 557

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
           G +  A +  + ML  G +PN  +Y IL   + ++G
Sbjct: 558 GKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 224/410 (54%), Gaps = 5/410 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +HRQ+   G   N+VT + ++      G    + S+F  +L  G +P+ +T +TLI   C
Sbjct: 91  LHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLC 150

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            +  + KA   ++ ++ +    + + Y  LI+GL K G+ K   E+L     + ++LDVV
Sbjct: 151 LKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVV 210

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           ++++++D       V  A   Y  M+     P V++Y+ LI GLC  G+L +A GL  ++
Sbjct: 211 MYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKM 270

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
           ++  + P++ T+S L+D FCK GK+++  +++  M+K+ +KP+ V  + L+NG      +
Sbjct: 271 ILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEV 330

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A   F    ++ + P++  ++ ++ G C++K   + +KLF  M    I PDV+T+  L
Sbjct: 331 NKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSL 390

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+   G +S A+ L  +M  RG  P++ITY++++  L K  ++   + +   ++ + +
Sbjct: 391 IDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNI 450

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            P +  YN+L+N L K   L  A K+F  +   G   D+ TYNT+I G+C
Sbjct: 451 QPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFC 500



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 195/384 (50%), Gaps = 6/384 (1%)

Query: 227 GQIGNASSLFDVLL-LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            Q+ N  S F+ LL    P P+++ F  ++ +  K         L+  M    +  +L+ 
Sbjct: 47  SQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVT 106

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
            SILI+   + G       +    L +G + D +  ++++      GD+ +A+  +D++L
Sbjct: 107 LSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVL 166

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             GF  N +SY  LI GLC+ G+   A  +  ++  + +   ++ Y+++IDG CK   + 
Sbjct: 167 ALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVN 226

Query: 406 DGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLM 460
           D F  Y  M+ + + P  V     +C L I G + DA+    + +   + P ++ F+ L+
Sbjct: 227 DAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILV 286

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           D  C+  +  +   +F++M   ++KP+++T+  L+ G      ++ A  +F  M + G+ 
Sbjct: 287 DAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVA 346

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PDV +YS +I G  K K +   + +F+ M    + PD+  YN L++ L K   +  ALKL
Sbjct: 347 PDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKL 406

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
            G++ DRG  P+IITYN+++   C
Sbjct: 407 IGEMHDRGQPPNIITYNSLLDALC 430



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 223/437 (51%), Gaps = 11/437 (2%)

Query: 146 SPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFH 199
           +P ++Q  +++  LV +N       L R M   G          L+N   + G    +F 
Sbjct: 66  TPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFS 125

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +   ++++G+ P+ +T   ++K LC+ G I  A    D +L +G + N V++ TLIN  C
Sbjct: 126 VFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLC 185

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K  + + A ++   +    +  D+++Y+ +IDG+ K   + +  +     + + +   VV
Sbjct: 186 KVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVV 245

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            +++++     +G +  A+    +M+     P V ++SIL+   C++G++ EA  +F  +
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVM 305

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LM 434
           + + ++P+++TY+SL++G+C   ++    S+++ M + G+ PD    S++I+G     ++
Sbjct: 306 MKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMV 365

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++ F +     + P++  +N+L+DG C+  R +  +KL   M      P++IT+  L
Sbjct: 366 DEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSL 425

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           +  +     +  AI L  ++    + P V TY+ +I+GL K   +     +F+ +  NG 
Sbjct: 426 LDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGY 485

Query: 555 APDIAIYNVLLNMLIKE 571
             D+  YN ++    K+
Sbjct: 486 NIDVYTYNTMIKGFCKK 502



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 244/509 (47%), Gaps = 61/509 (11%)

Query: 18  CYCSESKTHISDLQFNQANAILA---NLIKTNNPTPAI-QFFKWTHNCVSSPNIAQLIHV 73
           C+ S S    S   ++Q + +++   +L+   NPTP+I QF K   + V + + + ++ +
Sbjct: 32  CFTSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSL 91

Query: 74  LLQSDMRDVASHVFDKMVI-----QFGKTYNFFRLFRDSLGDF----GCDYSFLIENYVR 124
             Q +   +AS++    ++     Q G     F +F + L           + LI+    
Sbjct: 92  HRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCL 151

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK----GFCV 180
            G I +++     +  +G  L+    + L++ L          ++ R + GK       +
Sbjct: 152 KGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVM 211

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  +++G+ +  ++ +AF  + +++ +   P +VT N ++  LCI GQ+ +A  L   ++
Sbjct: 212 YNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMI 271

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L    P V TFS L++AFCKE K+++A  ++ +MM+ D+ P+++ Y              
Sbjct: 272 LENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTY-------------- 317

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
                                +S+M+ Y  + +V +A   ++ M   G  P+V SYSI+I
Sbjct: 318 ---------------------NSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+   + EA  LF ++  +++ P ++TY+SLIDG CKSG++     L   M  RG  
Sbjct: 357 SGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQP 416

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ +  + L++ L     +  A+    +     + P++  +N L++G C+  R  D  K+
Sbjct: 417 PNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKV 476

Query: 476 F--MLMGMYNIKPDVITHTVLIRGIASQG 502
           F  +L+  YNI  DV T+  +I+G   +G
Sbjct: 477 FEDVLVNGYNI--DVYTYNTMIKGFCKKG 503



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 169/361 (46%), Gaps = 35/361 (9%)

Query: 249 VTFSTLINAFCKEAKLEKAFQLYN-LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
            ++S+  N+    ++L      +N L+ + +  P +I +  ++  L KA        L  
Sbjct: 34  TSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHR 93

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
                G+  ++V  S +++ +  +G    +   +  +L  G+ P+ I+ + LIKGLC +G
Sbjct: 94  QMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKG 153

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
            + +A     +VL    + + ++Y +LI+G CK G+ +        M++R          
Sbjct: 154 DIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALE----MLRR---------- 199

Query: 428 LLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
             I+G +          VR+ ++    ++NT++DG C+ K   D    +  M    I P 
Sbjct: 200 --IDGKL----------VRLDVV----MYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPT 243

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           V+T+  LI G+   G L  AI L  +M+   + P V T+S ++    K   +    ++F 
Sbjct: 244 VVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFV 303

Query: 548 LMERNGVAPDIAIYNVLLN--MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           +M +  V P+I  YN L+N   L+ E N   A  +F  +   G+ PD+ +Y+ +I G+C 
Sbjct: 304 VMMKKDVKPNIVTYNSLMNGYCLVNEVN--KAESIFNTMAQIGVAPDVHSYSIMISGFCK 361

Query: 606 L 606
           +
Sbjct: 362 I 362



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 147/294 (50%), Gaps = 6/294 (2%)

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           +SS  ++      +   V +++ +L+     P++I +  ++  L +         L  Q+
Sbjct: 36  YSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQM 95

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD- 436
               +  +L+T S LI+ F + G     FS++ N++K+G +PDA+  + LI GL   GD 
Sbjct: 96  EFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDI 155

Query: 437 --ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             AL F  + + +    N   + TL++G C++ +    +++   +    ++ DV+ +  +
Sbjct: 156 HKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTI 215

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+     ++ A   + +M+ + + P V+TY+ +I GL     +   + +   M    +
Sbjct: 216 IDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENI 275

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            P +  +++L++   KE  +  A  +F  +  + ++P+I+TYN+++ GYC +N 
Sbjct: 276 NPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNE 329



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 121/228 (53%), Gaps = 12/228 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS--CLVDSNSVGQYYKLC 170
           +S L++ + + GK+ E+  +F  M  M   + P++V    LM+  CLV  N V +   + 
Sbjct: 282 FSILVDAFCKEGKVKEAKNVFVVM--MKKDVKPNIVTYNSLMNGYCLV--NEVNKAESIF 337

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M   G       Y  +++G  +  +++ A  +  ++  +   P++VT N ++  LC +
Sbjct: 338 NTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKS 397

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+I  A  L   +   G  PN++T+++L++A CK   ++KA +L   + + ++ P +  Y
Sbjct: 398 GRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTY 457

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +ILI+GL K+GRLK+  ++    L  G  +DV  +++++  +   G V
Sbjct: 458 NILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 217/426 (50%), Gaps = 7/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL++ G++  A  + ++    G   +I T   I+  L  N +I  A +L + +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P + T++ L+N  CK  +LE+A  L   +++    PD++ Y+ LIDGL K  R 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +L      RGL LD V +++++   +  G + +A   Y  M + G +P+V++ S +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+ GR+  A  +F  +  R L P+ + YS+LI G CK+ K+     +   M K   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD +  ++LI+GL   GD   A  FF + +     P+++ +N L+ G C+         
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  M      P+V+T+  LI G+  +  L+ A L +  M +RG  PD   YS+++ GL 
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +  G  +F  MER+GVA +      L+  L K   +D A+ LF  +   G+ P   
Sbjct: 361 KSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPY 418

Query: 595 TYNTII 600
            YN+II
Sbjct: 419 AYNSII 424



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 167/324 (51%), Gaps = 5/324 (1%)

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           +SILI+GL KAG L + + L       G  +D+  +++++D       +  AV   +++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  P + +Y+ L+ GLC+ GRL EA  L  +++     P ++TY+SLIDG  K  +  
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL-----IPNLFIFNTLM 460
           + + L+  M  RGL  D V  + LI GL+         SV  T+     +P++   +T++
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG C+  R    V++F  M    + P+ + ++ LI G+     +  A+ +  QM K   T
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD ITY+ +I GL K  +++     F  M   G  PD+  YN+L++   K  N DAA  +
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
           F  ++     P+++TY T+I G C
Sbjct: 302 FDDMSSSRCSPNVVTYGTLISGLC 325



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 181/357 (50%), Gaps = 11/357 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+    ++G+++E++++   + D G   +PD+V    L+  L       + YKL + 
Sbjct: 72  YNALLNGLCKMGRLEEAIDLLRKIVDNGC--TPDVVTYTSLIDGLGKKKRSFEAYKLFKE 129

Query: 173 MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G  +    Y  L+ GLL+ G I  A  +++ +  +G VP++VT + ++  LC  G+
Sbjct: 130 MASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR 189

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           IG A  +F  +   G  PN V +S LI+  CK  K++ A ++   M +    PD I Y+I
Sbjct: 190 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 249

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDGL K+G +          L+ G K DV  ++ ++  +   G+   A   +D M +  
Sbjct: 250 LIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR 309

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV++Y  LI GLC++ +L +A   +  +  R   P    YSSL+DG CKSGKL  G 
Sbjct: 310 CSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC 369

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG---DALRFFFQSVRMTLIPNLFIFNTLMDG 462
            L+D M + G+        L+ +       D     F ++R   +P+ + +N+++  
Sbjct: 370 MLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISA 426



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 178/360 (49%), Gaps = 5/360 (1%)

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           TFS LIN   K   L +A  L           D+  Y+ ++D L K  +++E   L+   
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
              G    +  ++++++    +G +  A+    ++++ G  P+V++Y+ LI GL ++ R 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  LF ++  R L    + Y++LI G  ++GK+    S+Y  M  +G  PD V  S +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 430 INGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I+GL     +G A+R F       L PN  +++ L+ G C+ ++    +++   M     
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PD IT+ +LI G+   G +++A   F +ML+ G  PDV TY+ +I G  K  N      
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +F  M  +  +P++  Y  L++ L K   L  A   +  + +RG  PD   Y++++ G C
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 40/82 (48%)

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           T+S +I+GL K   +     + +    NG   DI  Y  +++ L K   +  A+ L  ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
           T  G  P I TYN ++ G C +
Sbjct: 61  TANGCTPTIATYNALLNGLCKM 82


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 264/552 (47%), Gaps = 47/552 (8%)

Query: 102 RLFRDSLGDFGCDYSF-----LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
            LF+ +    G  ++F     LI+    +G      ++   M D G+     L   +M  
Sbjct: 84  ELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKH 143

Query: 157 LVDSNSVGQYYKLCRAMRG-----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
              +   GQ  +L   M G       F  Y  +++ L+       A ++   ++ RG  P
Sbjct: 144 YGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSP 203

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
            + T   ++K LC+  ++ +A SL   +   G  PN V + TLI+A C+  ++ +A QL 
Sbjct: 204 TVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLL 263

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M  M   PD+  ++ +I GL +AGR+ E  +LL   L RG   D + +  +M     +
Sbjct: 264 EDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRM 323

Query: 332 GDVGRAVQT--------------------------------YDRMLNGGFLPNVISYSIL 359
           G V  A                                   Y+ M+  G+ P+  +++I+
Sbjct: 324 GQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIM 383

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GL ++G LV A  L  +++ +R EP+++TY+ LI+GFCK G+L +   + ++M  +GL
Sbjct: 384 IDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGL 443

Query: 420 KPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             + V     +C+L  +G + +AL+ F +       P+++ FN+L++G C+  +  + + 
Sbjct: 444 SLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALS 503

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L+  M +  +  + +T+  L+     + S+  A  L  +ML RG   D ITY+ +I  L 
Sbjct: 504 LYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALC 563

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +  GL +F+ M   G+ P I   N+L++ L +   ++ ALK    +  RGL PDI+
Sbjct: 564 KTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIV 623

Query: 595 TYNTIICGYCSL 606
           TYN++I G C +
Sbjct: 624 TYNSLINGLCKM 635



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 245/519 (47%), Gaps = 21/519 (4%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDE-----SVEIFAYMSDMGIYLSPDLVQRLMSC 156
           RL  D  G + CD +F   N V    +D      +  +F  M   G+  +      +M  
Sbjct: 155 RLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKA 214

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
           L   + V     L R M   G CV     Y+ L++ L     +  A  +   +      P
Sbjct: 215 LCMVSEVDSACSLLRDMAKHG-CVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEP 273

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           ++ T N ++  LC  G+I  A+ L D +LL G   + +T+  L++  C+  ++++A  L 
Sbjct: 274 DVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALL 333

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVVVFSSVMDAYVG 330
           N +      P+ ++Y+ LI G   +GR +E  +LL   +   G + D   F+ ++D  V 
Sbjct: 334 NKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVK 389

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G +  A++  + M+   F PNVI+Y+ILI G C+QGRL EA  +   +  + L  + + 
Sbjct: 390 KGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG 449

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           Y+ LI   CK G + +   L+  M  +G KPD    + LINGL     M +AL  +    
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              +I N   +NTL+             KL   M       D IT+  LI+ +   G++ 
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 569

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
             + LF +ML +G+ P +I+ + +I GL +   ++  L   + M   G+ PDI  YN L+
Sbjct: 570 KGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLI 629

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N L K  ++  A  LF +L   G+ PD ITYNT+I  +C
Sbjct: 630 NGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHC 668



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 245/486 (50%), Gaps = 14/486 (2%)

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR----GKGFCV 180
           + ++D +  +   M+  G   +  + Q L+  L ++N V +  +L   M           
Sbjct: 218 VSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQT 277

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +  +++GL R G I  A  +  +++ RGF  + +T   ++  LC  GQ+  A +L + + 
Sbjct: 278 FNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI- 336

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQL-YNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              P PN V ++TLI+ +    + E+A  L YN M+     PD   ++I+IDGL K G L
Sbjct: 337 ---PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYL 393

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               ELL   + +  + +V+ ++ +++ +   G +  A +  + M   G   N + Y+ L
Sbjct: 394 VSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCL 453

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC+ G + EA  LFG++  +  +P + T++SLI+G CK+ K+ +  SLY +M   G+
Sbjct: 454 ICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGV 513

Query: 420 KPDAVVCSLLING-LMGDALRFFFQSVRMTLIPNL----FIFNTLMDGCCRLKRATDTVK 474
             + V  + L++  LM D+++  F+ V   L          +N L+   C+       + 
Sbjct: 514 IANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLG 573

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    I P +I+  +LI G+   G ++ A+     M+ RGLTPD++TY+++I+GL 
Sbjct: 574 LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLC 633

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  ++    ++F  ++  G+ PD   YN L++    E   + A  L  +  D G  P+ +
Sbjct: 634 KMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEV 693

Query: 595 TYNTII 600
           T++ +I
Sbjct: 694 TWSILI 699



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 230/484 (47%), Gaps = 20/484 (4%)

Query: 59  HNCVSSPNIAQ-LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSF 117
           H CV +  I Q LIH L +++    A  + + M +   +     + F D           
Sbjct: 234 HGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPD--VQTFND----------- 280

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +I    R G+I E+ ++   M   G          LM  L     V +   L   +    
Sbjct: 281 VIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPN 340

Query: 178 FCVYEFLMNGLLRKGVIENAFHM-HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
             +Y  L++G +  G  E A  + +  ++  G+ P+  T N ++  L   G + +A  L 
Sbjct: 341 TVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL 400

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + ++    +PNV+T++ LIN FCK+ +LE+A ++ N M    L  + + Y+ LI  L K 
Sbjct: 401 NEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKD 460

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G ++E  +L      +G K D+  F+S+++       +  A+  Y  M   G + N ++Y
Sbjct: 461 GNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTY 520

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + L+     +  + +A  L  ++L R      +TY+ LI   CK+G +  G  L++ M+ 
Sbjct: 521 NTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLG 580

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           +G+ P  + C++LI+GL     + DAL+F    +   L P++  +N+L++G C++    +
Sbjct: 581 KGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQE 640

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              LF  +    I+PD IT+  LI     +G  + A LL ++ +  G  P+ +T+S +I+
Sbjct: 641 ASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700

Query: 532 GLFK 535
            + K
Sbjct: 701 YIVK 704



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 33/268 (12%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKM-- 90
           N ++  L K  N   A+Q F         P+I     LI+ L ++   + A  ++  M  
Sbjct: 451 NCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFL 510

Query: 91  --VIQFGKTYNFFR---LFRDSLGDF----------GCD-----YSFLIENYVRIGKIDE 130
             VI    TYN      L RDS+             GC      Y+ LI+   + G +++
Sbjct: 511 EGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMN 186
            + +F  M   GI+ +      L+S L  +  V    K  + M  +G       Y  L+N
Sbjct: 571 GLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLIN 630

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           GL + G ++ A ++  ++   G  P+ +T N ++ R C  G   +A  L    +  G  P
Sbjct: 631 GLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIP 690

Query: 247 NVVTFSTLINAFCKE----AKLEKAFQL 270
           N VT+S LIN   K+    A+  K F +
Sbjct: 691 NEVTWSILINYIVKKIPWGARFSKDFTV 718



 Score = 39.3 bits (90), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 39/87 (44%)

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P   +Y+ ++  L  G    V  ++F  M   GV+P +  + V++  L     +D+A  L
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLN 607
              +   G  P+ + Y T+I   C  N
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENN 254


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 259/507 (51%), Gaps = 17/507 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLC-- 170
           Y+ ++ +    G +D +V +F  +    +  +PD +    LM  L   + +     L   
Sbjct: 161 YNIVLRSLCARGDLDRAVTLFDSLRRRQV--APDRITYSTLMCGLAKQDRLDHALDLLDE 218

Query: 171 --RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQ-RGFVPNIVTCNKILKRLCING 227
             R+        Y  L+ G  + G  E    +  ++++  G  PN+ T N +L  LC  G
Sbjct: 219 MPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +      +++ ++    +P+V+T+  LI+  C+   ++ A ++Y+ +++  LV D  +Y+
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYN 338

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+ G  +AGR++E  +   +A   GL+ ++  ++ ++      G V  A++ +D +   
Sbjct: 339 SLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKD 397

Query: 348 -GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
              +P+ +++  LI GLCQ G   +A  +F +  +   +  + +YSS+I+G C  G+L D
Sbjct: 398 VACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVD 457

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              +Y+ M K G KP++ + + LI+G        DA+R + +       P +  +NTL+D
Sbjct: 458 AVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLID 517

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+ ++  +   +   M      PD+ T+  LIRG+ S   +  A+ ++ Q+L +GL  
Sbjct: 518 GLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKV 577

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLM-ERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           DV+ ++ +IHGL     +   LH+F  M E+    P++  YN L++ L +   +D A  L
Sbjct: 578 DVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATL 637

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLN 607
           +  +T+ GLEPDII+YNT I G CS +
Sbjct: 638 WTSITEDGLEPDIISYNTRIKGLCSCD 664



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 204/399 (51%), Gaps = 10/399 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++GL R G ++ A  ++ ++I+ G V +    N ++K  C  G++  A   +D  
Sbjct: 301 TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA 360

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL--VPDLIIYSILIDGLFKAG 297
              G + N+ T++ +I        +++A +L++L+ E D+  +PD + +  LI GL + G
Sbjct: 361 GFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLL-EKDVACIPDTVTFGTLIHGLCQNG 418

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
              +   +   A   G +LDV  +SS+++    +G +  AV+ Y++M   G  PN   Y+
Sbjct: 419 FANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYN 478

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G CQ  R  +A  ++ ++      P+++TY++LIDG CK+ K ++  S+   M++ 
Sbjct: 479 ALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN 538

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G  PD      LI GL     + DAL  + Q +   L  ++ + N L+ G C   +  + 
Sbjct: 539 GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEA 598

Query: 473 VKLFMLMG-MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
           + +F  M    N  P+++T+  L+ G+   G +  A  L+  + + GL PD+I+Y+  I 
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIK 658

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           GL     I  G+ +   +   G+ P +  +N+L+  +IK
Sbjct: 659 GLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 218/470 (46%), Gaps = 28/470 (5%)

Query: 85  HVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
            V+DK+V   G   N               Y+ +++   + G+  E  E++  M  +   
Sbjct: 249 RVWDKLVKDPGARPNL------------ATYNVMLDGLCKFGRFKEVGEVWERM--VANN 294

Query: 145 LSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAF 198
           L PD++    L+  L  S  V    ++   +   G  +    Y  L+ G  + G ++ A+
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAW 354

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL-VGPKPNVVTFSTLINA 257
                    G   N+ T N ++K L  +G +  A  L+D+L   V   P+ VTF TLI+ 
Sbjct: 355 KFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHG 413

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
            C+     KAF ++          D+  YS +I+GL   GRL +  ++       G K +
Sbjct: 414 LCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPN 473

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
             ++++++  +  +     AV+ Y +M + G  P VI+Y+ LI GLC+  +  EA  +  
Sbjct: 474 SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAR 533

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
           +++     P + TY SLI G     K+ D  S++  ++ +GLK D ++ ++LI+GL    
Sbjct: 534 EMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG 593

Query: 434 -MGDALRFFFQ-SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
            + +AL  F     +    PNL  +NTLMDG            L+  +    ++PD+I++
Sbjct: 594 KVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
              I+G+ S   +   I L  ++L RG+ P VIT++ ++  + K   I V
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 200/444 (45%), Gaps = 84/444 (18%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLL--LVGPK--PNVVTFSTLINAFCKEAK 263
           G  P I + N +L       +  +A + F  L     G +  PN+ T++ ++ + C    
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L++A  L++ +    + PD I YS L+ GL K  R           LD  L L       
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDR-----------LDHALDL------- 215

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
                             D M      P+V+ Y+ L+ G  + G   +   ++ +++   
Sbjct: 216 -----------------LDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258

Query: 384 -LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---A 437
              P+L TY+ ++DG CK G+ ++   +++ M+   L+PD +   +LI+GL   GD   A
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGA 318

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            R + + ++  L+ +  ++N+L+ G C+  R  +  K +   G   ++ ++ T+ ++I+G
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKG 377

Query: 498 IASQGSLSSAILLFFQMLKRGLT--PDVITYSAIIHGL-----------------FKGKN 538
           +   G +  AI L+  +L++ +   PD +T+  +IHGL                   GK 
Sbjct: 378 LFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436

Query: 539 ISV------------------GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           + V                   + +++ M+++G  P+  IYN L++   +      A+++
Sbjct: 437 LDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRI 496

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
           + ++ D G  P +ITYNT+I G C
Sbjct: 497 YSKMADNGCSPTVITYNTLIDGLC 520



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 177/411 (43%), Gaps = 88/411 (21%)

Query: 70  LIHVLLQSDMRDVASHVFDKMV------------------IQFGKTYNFFRLFRDSLGDF 111
           LIH L +S   D A+ V+ +++                   Q G+    ++ F DS G  
Sbjct: 305 LIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFA 363

Query: 112 GC----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY- 166
           G      Y+ +I+     G +DE++E++            DL+++ ++C+ D+ + G   
Sbjct: 364 GLRNLRTYNIMIKGLFDSGMVDEAIELW------------DLLEKDVACIPDTVTFGTLI 411

Query: 167 YKLCR-AMRGKGFCVYE---------------FLMNGLLRKGVIENAFHMHRQVIQRGFV 210
           + LC+     K F ++E                ++NGL   G + +A  ++ ++ + G  
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN    N ++   C   +  +A  ++  +   G  P V+T++TLI+  CK  K ++A  +
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSV 531

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV------------ 318
              M+E    PD+  Y  LI GLF   ++ +   +    L +GLK+DV            
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCS 591

Query: 319 ------------------------VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
                                   V ++++MD     G + +A   +  +   G  P++I
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           SY+  IKGLC   R+ E   L  +VL R + P+++T++ L+    K G ++
Sbjct: 652 SYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 167/652 (25%), Positives = 291/652 (44%), Gaps = 88/652 (13%)

Query: 33  NQANAILANLIKTNNPTPAIQFFKW------------THNC-----VSSPNIAQLIHVLL 75
           +   A+L +L  T     AI FF+W            T+NC     V+  N +Q   +  
Sbjct: 87  SHVAAVLRSLKVTGT---AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHE 143

Query: 76  QSDMRDVASHVF--DKMVIQFGKTYNFFRLFRDSLGDFG------CD---YSFLI--ENY 122
           +     +A + F  + ++  F +T    R   D++  F       C    ++FLI  +  
Sbjct: 144 EMLKAGIAPNTFSFNILIRSFART----RRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF-- 178
            + G  +++ E+F  M  MG ++ PD  L   ++  L+ +  V +  ++   M   GF  
Sbjct: 200 CKAGMDEKAFEVFHEMMAMG-FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPP 258

Query: 179 --CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
               Y  +++GL + G  + A  +   ++ +  VP  VT   ++  LC  G +  A  LF
Sbjct: 259 DAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELF 318

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
            V+   G +PN V +++LI+ F K  ++++A  L++ M+E    PD+I ++++IDGL K+
Sbjct: 319 RVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKS 378

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G  ++  +     +  G K +VV +++++     IG V  A +    M+  G  P+ ++Y
Sbjct: 379 GNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTY 438

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC----------------- 399
             L+ G C+ GRL EA  L  ++      P+L  YSSL++G C                 
Sbjct: 439 ICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSK 498

Query: 400 -------------------KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL------- 433
                              K+G+L +   ++  M+  G KPDA   ++LINGL       
Sbjct: 499 AAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENR 558

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           +  A        ++  +P+   +  L  G C++      VK+           DV+ +T 
Sbjct: 559 VERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTA 618

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L  G+  QG +  A+ LF +M+++G  PD   Y  II+GL K K +      F  M   G
Sbjct: 619 LCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKG 678

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG-LEPDIITYNTIICGYC 604
             P +A Y  L+  L    N+D A   F  +  RG L   ++ Y+ +I G+C
Sbjct: 679 QKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFC 730



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 224/473 (47%), Gaps = 44/473 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  LMN L+ +      + +H ++++ G  PN  + N +++      +  +A + F+++
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP-DLIIYSILIDGLFKAGR 298
                KP++ TF  L++  CK    EKAF++++ MM M  VP D  +++ ++  L KA R
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +KE  E+       G   D + +++++D     G    A++  D ML    +P  ++Y I
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+  LC+ G L  A  LF  +      P+ + Y+SLI GF KSG++++  SL+D M++ G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
            +PD +  +++I+GL        A + F + +R    PN+  + T++ G  ++ R  +  
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           ++   M  +   PD +T+  L+ G    G L  A  L  ++ K   +P++  YS++++GL
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGL 480

Query: 534 FKGKNIS--------------------------VGL----------HMFKLMERNGVAPD 557
             G ++                           VGL           +F+ M   G  PD
Sbjct: 481 CDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPD 540

Query: 558 IAIYNVLLNMLIK--ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
              YN+L+N L +  E  ++ A  L   L   G  PD +TY  +  G C +  
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGE 593



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 159/690 (23%), Positives = 284/690 (41%), Gaps = 112/690 (16%)

Query: 7   NLLTVWRSINKCYCSESKTHISDLQFN--QANAILANLIKTNNPTPAIQFFKWTHNCVSS 64
           NLL   ++ ++CY    +   + +  N    N ++ +  +T     A+  F+        
Sbjct: 127 NLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCK 186

Query: 65  PNIAQ---LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD---YSFL 118
           P++     L+  L ++ M + A  VF +M+               ++G    D   ++ +
Sbjct: 187 PDLHTFLILVDCLCKAGMDEKAFEVFHEMM---------------AMGFVPPDRALHTAM 231

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGK 176
           +   ++  ++ E+ E+F  M   G    PD +    ++  L  +    +  K+   M  K
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCG--FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289

Query: 177 GFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
             CV     Y  L+N L + G +E A  + R +   GF PN V    ++     +G++  
Sbjct: 290 A-CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A SLFD ++  G +P+V+T + +I+  CK    E+A + +  MM     P+++ Y+ +I 
Sbjct: 349 ACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQ 408

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL K GR+     ++   +  G   D V +  ++D +  +G +  A Q  D +      P
Sbjct: 409 GLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP 468

Query: 352 NVISYSILIKGLC------------------------------------QQGRLVEACGL 375
           N+  YS L+ GLC                                    + GRL EAC +
Sbjct: 469 NLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRI 528

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKS--GKLRDGFSLYDNMIKRGLKPDAV--------- 424
           F +++    +P   TY+ LI+G C+S   ++   F+L  ++ K G  PDAV         
Sbjct: 529 FQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGL 588

Query: 425 ------------------------------VCS-LLINGLMGDALRFFFQSVRMTLIPNL 453
                                         +C+ L   G +  A+  F + VR    P+ 
Sbjct: 589 CKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDA 648

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +  +++G  ++K+  D  K F  M     KP V T+T L++ +   G++  A   F  
Sbjct: 649 AAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFES 708

Query: 514 MLKRG-LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           ML RG L   V+ Y A+IHG  K   +   L +F+ M   G  P       L + L++  
Sbjct: 709 MLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSG 768

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             + A +L  ++   G  P   T+  I+ G
Sbjct: 769 KTEKAQELLQEMAAGGSPPHAATFTAILDG 798



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 227/537 (42%), Gaps = 74/537 (13%)

Query: 38  ILAN-LIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           IL N L K      A + F+        PN      LIH   +S     A  +FD+MV  
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359

Query: 94  ---------------FGKTYNFFRLFR--DSLGDFGCD-----YSFLIENYVRIGKIDES 131
                            K+ NF +  +  + +   GC      Y+ +I+   +IG++  +
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419

Query: 132 VEIFAYMSDMGIYLSPDLVQRLMSCLVDS-------NSVGQYY-KLCRAMRGKGFCVYEF 183
             I   M   G +  PD V  +  CL+D        +   Q   +L +        +Y  
Sbjct: 420 FRIMKGMIAHGCF--PDSVTYI--CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475

Query: 184 LMNGLLRKGVIENAFH---MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           L+NGL   G +E          +       P +  C  I+  LC  G++  A  +F  ++
Sbjct: 476 LVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGL--CCSIIVGLCKTGRLDEACRIFQRMV 533

Query: 241 LVGPKPNVVTFSTLINAFCK--EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
             G KP+  T++ LIN  C+  E ++E+AF L + + ++  +PD + Y+ L  GL K G 
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGE 593

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +    ++L  A  RG   DVV ++++       G V RAV  +  M+  G  P+  +Y  
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCC 653

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +I GL +  +L +AC  F +++ +  +P++ TY++L+   C +G + + F  +++M+ RG
Sbjct: 654 IINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARG 713

Query: 419 LKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
                                         L+ ++ I++ L+ G C+  +    +KLF  
Sbjct: 714 -----------------------------ELVGSVMIYDALIHGFCKALKVDAALKLFED 744

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           M      P  +T   L  G+   G    A  L  +M   G  P   T++AI+ GL K
Sbjct: 745 MISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRK 801



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 162/367 (44%), Gaps = 31/367 (8%)

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G + +V T++ L+N    E    + + ++  M++  + P+   ++ILI    +  R  +
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP-NVISYSILI 360
                     +  K D+  F  ++D     G   +A + +  M+  GF+P +   ++ ++
Sbjct: 173 AVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
           + L +  R+ EA  +FGQ+      P  + Y+++IDG  K+G  ++   + DNM+ +   
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           P  V   +L+N L                              C+        +LF +M 
Sbjct: 293 PTEVTYGILVNSL------------------------------CKAGTLERAEELFRVMA 322

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
               +P+ + +T LI G A  G +  A  LF +M++ G  PDVIT++ +I GL K  N  
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
                F+ M R G  P++  Y  ++  L K   +  A ++   +   G  PD +TY  ++
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLL 442

Query: 601 CGYCSLN 607
            G+C L 
Sbjct: 443 DGFCKLG 449



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 9/189 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ L       G++D +V +F  M   G   +PD      +++ L+    +    K    
Sbjct: 616 YTALCTGLCYQGQVDRAVSLFQEMVRQGG--APDAAAYCCIINGLIKVKKLEDACKFFDE 673

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRG-FVPNIVTCNKILKRLCING 227
           M GKG       Y  L+  L   G ++ AFH    ++ RG  V +++  + ++   C   
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKAL 733

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  LF+ ++  G  P  VT ++L +   +  K EKA +L   M      P    ++
Sbjct: 734 KVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFT 793

Query: 288 ILIDGLFKA 296
            ++DGL K+
Sbjct: 794 AILDGLRKS 802



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 5/176 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  + R         Y  +I   +++ K++++ + F  M   G   +      L+  L  
Sbjct: 636 FQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH 695

Query: 160 SNSVGQYYKLCRAMRGKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           + +V + +    +M  +G       +Y+ L++G  +   ++ A  +   +I RG VP  V
Sbjct: 696 AGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAV 755

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           T   +   L  +G+   A  L   +   G  P+  TF+ +++   K  +  K  +L
Sbjct: 756 TSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 249/537 (46%), Gaps = 74/537 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +     R  +++E+   F  M   G  L PD                  Y  C A  
Sbjct: 13  YTIITAGLCRAKRMNEAKLTFEEMQKTG--LKPD------------------YNACSA-- 50

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                    L++G +R+G I+    +   ++  G   N++T N ++  LC  G++  A+ 
Sbjct: 51  ---------LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAE 101

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   ++ +G KPN  TF  LI  +C+E  + +A +L + M + +LVP  + Y  +I+GL 
Sbjct: 102 ILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC 161

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
               L   N+LL      GLK +VVV+S+++  Y   G +  A +  D M   G  P++ 
Sbjct: 162 HCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIF 221

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ +I  L + G++ EA     ++  R L+P  +T+ + I G+ K+GK+ +    +D M
Sbjct: 222 CYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 281

Query: 415 IKRGLK-----------------------------------PDAVVCSLLINGLMG---- 435
           +  GL                                    PD   CS  I+GL+     
Sbjct: 282 LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRV 341

Query: 436 -DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +AL+ F +     L+P++F +++L+ G C+        +L   M +  I P++  +  L
Sbjct: 342 QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNAL 401

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           + G+   G +  A  LF  M ++GL PD +TYS +I G  K +N++    +F  M   GV
Sbjct: 402 VDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 461

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLI 611
            P   +YN L++   KE +++ A+ LF ++  +G     +++NT+I GYC   SC I
Sbjct: 462 QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYC--KSCKI 515



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 217/439 (49%), Gaps = 40/439 (9%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           ++G VPN  T   I   LC   ++  A   F+ +   G KP+    S LI+ F +E  ++
Sbjct: 3   EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +  ++ ++M+   +  +LI Y++LI GL K G++++  E+L   +  G K +   F  ++
Sbjct: 63  EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 122

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           + Y    ++GRA++  D M     +P+ +SY  +I GLC    L  A  L  ++    L+
Sbjct: 123 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 182

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMI------------------------------ 415
           P+++ YS+LI G+   G++ +   L D M                               
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242

Query: 416 -----KRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
                 RGLKPDAV     I      G M +A ++F + +   L+PN  ++  L++G  +
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 302

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                + + +F  +    + PDV T +  I G+   G +  A+ +F ++ ++GL PDV T
Sbjct: 303 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 362

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           YS++I G  K   +     +   M   G+AP+I IYN L++ L K  ++  A KLF  + 
Sbjct: 363 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 422

Query: 586 DRGLEPDIITYNTIICGYC 604
           ++GLEPD +TY+T+I GYC
Sbjct: 423 EKGLEPDSVTYSTMIDGYC 441



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 245/511 (47%), Gaps = 60/511 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  Y   G+I+E+  +   MS  G+  +PD+                         
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGV--APDI------------------------- 220

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
              FC Y  +++ L + G +E A     ++  RG  P+ VT    +      G++  A+ 
Sbjct: 221 ---FC-YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 276

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            FD +L  G  PN   ++ LIN   K   L +A  ++  +  + ++PD+   S  I GL 
Sbjct: 277 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLL 336

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K GR++E  ++     ++GL  DV  +SS++  +   G+V +A + +D M   G  PN+ 
Sbjct: 337 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 396

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ L+ GLC+ G +  A  LF  +  + LEP  +TYS++IDG+CKS  + + FSL+  M
Sbjct: 397 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 456

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
             +G++P + V + L++G      M  A+  F + ++      L  FNTL+DG C+  + 
Sbjct: 457 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKI 515

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR------------ 517
            +  +LF  M    I PD +T+T +I      G +  A LLF +M +R            
Sbjct: 516 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFE 575

Query: 518 -----GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER---NGVAPDIAIYNVLLNMLI 569
                G+ PD +TY  +I+   K  N+   +  FKL +     G+     I+++L+  L 
Sbjct: 576 KMVAKGVKPDEVTYGLVIYAHCKEDNL---VEAFKLRDEVVGKGMLTKGTIHDLLITALC 632

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           K  +L  A KL  ++ + GL+P +   +T++
Sbjct: 633 KREDLTEASKLLDEMGELGLKPSLAACSTLV 663



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 244/527 (46%), Gaps = 36/527 (6%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           +FGK      + +  +   GC      +  LIE Y R   +  ++E+   M    +  S 
Sbjct: 92  KFGKMEKAAEILKGMI-TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 150

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQ 203
                +++ L     +    KL   M   G      VY  L+ G   +G IE A  +   
Sbjct: 151 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDG 210

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +   G  P+I   N I+  L   G++  AS+    +   G KP+ VTF   I  + K  K
Sbjct: 211 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 270

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           + +A + ++ M++  L+P+  +Y++LI+G FKAG L E   +       G+  DV   S+
Sbjct: 271 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 330

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
            +   +  G V  A++ +  +   G +P+V +YS LI G C+QG + +A  L  ++ ++ 
Sbjct: 331 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 390

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           + P++  Y++L+DG CKSG ++    L+D M ++GL+PD+V  S +I+G      + +A 
Sbjct: 391 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 450

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F +     + P+ F++N L+ GCC+       + LF  M         ++   LI G 
Sbjct: 451 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGY 509

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM-ERNGVAPD 557
                +  A  LF +M+ + + PD +TY+ +I    K   +     +FK M ERN +   
Sbjct: 510 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI--- 566

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
                           +D    LF ++  +G++PD +TY  +I  +C
Sbjct: 567 ----------------VDTVFALFEKMVAKGVKPDEVTYGLVIYAHC 597



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 176/371 (47%), Gaps = 40/371 (10%)

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M E  LVP+   Y+I+  GL +A R+ E           GLK D    S+++D ++  GD
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           +   ++  D M++ G   N+I+Y++LI GLC+ G++ +A  +   ++    +P+  T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-------------------- 433
           LI+G+C+   +     L D M KR L P AV    +INGL                    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 434 ------------MGDALRFFFQSVRMTL--------IPNLFIFNTLMDGCCRLKRATDTV 473
                       MG A     +  R  L         P++F +N ++    +  +  +  
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
              + +    +KPD +T    I G +  G ++ A   F +ML  GL P+   Y+ +I+G 
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           FK  N+   L +F+ +   GV PD+   +  ++ L+K   +  ALK+F +L ++GL PD+
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 594 ITYNTIICGYC 604
            TY+++I G+C
Sbjct: 361 FTYSSLISGFC 371



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 190/418 (45%), Gaps = 38/418 (9%)

Query: 44  KTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNF 100
           K  N   A+  F+  H     P++   +  IH LL++     A  VF ++  + G   + 
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK-EKGLVPDV 360

Query: 101 FRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           F             YS LI  + + G+++++ E+   M   GI  +  +   L+  L  S
Sbjct: 361 FT------------YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 408

Query: 161 NSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
             + +  KL   M  KG       Y  +++G  +   +  AF +  ++  +G  P+    
Sbjct: 409 GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 468

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++   C  G +  A +LF  +L  G     ++F+TLI+ +CK  K+++A QL+  M+ 
Sbjct: 469 NALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIA 527

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-----------------GLKLDVV 319
             ++PD + Y+ +ID   KAG+++E N L     +R                 G+K D V
Sbjct: 528 KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEV 587

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            +  V+ A+    ++  A +  D ++  G L     + +LI  LC++  L EA  L  ++
Sbjct: 588 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 647

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
               L+PSL   S+L+  F ++GK+ +   +++ +   GL PD      L+NG + D 
Sbjct: 648 GELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDT 705


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 158/530 (29%), Positives = 259/530 (48%), Gaps = 38/530 (7%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G       + RD  G  GCD     Y+ L+  + R G++D +  +   M + G  L P+L
Sbjct: 171 GHRKEALSVLRDMRG-AGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG--LKPNL 227

Query: 150 V--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQ 203
           V    +++ +  +  +    K+   M  +G       Y  L+ G  + G    A  +  +
Sbjct: 228 VTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAE 287

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           + ++G +P++VT   ++  +C  G +  A  L   +   G + N +TF+ LI+ FCK+  
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGF 347

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L+ A      M +  + P ++ Y+ LI+G    GR+ E  EL+     +G+K DVV +S+
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++ AY   GD   A Q   +ML  G LP+ I+YS LI+ LC++ RL +A  LF  ++   
Sbjct: 408 ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           L+P  +TY+SLIDG CK G +    SL+D M+K G+ PD V  S+LINGL       +A 
Sbjct: 468 LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQ 527

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVI------ 489
           R  F+      +P    ++ LM  CCR   LK     +K F + G+ N    V       
Sbjct: 528 RLLFKLYHEEPVPANIKYDALMR-CCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDR 586

Query: 490 -------THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF-KGKNISV 541
                   ++VLI G   +G++  A+    QML+ G  P+  +  ++I GLF KG  +  
Sbjct: 587 NWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEA 646

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
              + +L+    +A D      L+++ +KE N+DA L +   +   GL P
Sbjct: 647 DQVIQQLLNCCSLA-DAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 215/414 (51%), Gaps = 30/414 (7%)

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
           L    + +A      ++  G  PN+ T N +++ LC  G    A S+   +   G  PN 
Sbjct: 133 LSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNA 192

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           VT++TL+ AFC+  ++++A +L ++M E  L P+L+ ++ +++G+ KAGR+++  ++   
Sbjct: 193 VTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDE 252

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
            +  GL  D V +++++  Y  +G    A+  +  M   G +P+V++++ LI  +C+ G 
Sbjct: 253 MVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGN 312

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           L  A GL  ++  R L+ + +T+++LIDGFCK G L D       M +  ++P +VVC  
Sbjct: 313 LERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQP-SVVC-- 369

Query: 429 LINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                                      +N L++G C + R  +  +L   M    +KPDV
Sbjct: 370 ---------------------------YNALINGYCMVGRMDEARELVREMEAKGVKPDV 402

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T++ ++      G   SA  L  QML+ G+ PD ITYS++I  L + K +     +FK 
Sbjct: 403 VTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKN 462

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           M   G+ PD   Y  L++   KE N++ AL L  ++   G+ PD++TY+ +I G
Sbjct: 463 MISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLING 516



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 229/460 (49%), Gaps = 20/460 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+  L  +G  + A  + R +   G  PN VT N ++   C  G++  A  L D++
Sbjct: 159 TYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMM 218

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KPN+VTF++++N  CK  ++E A ++++ M++  L PD + Y+ L+ G  K G  
Sbjct: 219 REGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCS 278

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   +      +G+  DVV F+S++      G++ RAV     M   G   N I+++ L
Sbjct: 279 HEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTAL 338

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C++G L +A     ++   R++PS++ Y++LI+G+C  G++ +   L   M  +G+
Sbjct: 339 IDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGV 398

Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KPD V  S ++     NG    A +   Q +   ++P+   +++L+   C  KR  D   
Sbjct: 399 KPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHV 458

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    ++PD +T+T LI G   +G++  A+ L  +M+K G+ PDV+TYS +I+GL 
Sbjct: 459 LFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLS 518

Query: 535 KGKNISVGLH-MFKLMERNGVAPDI-----------AIYNVLLNMLIKECN---LDAALK 579
           K          +FKL     V  +I           A    +L +L   C    ++ A K
Sbjct: 519 KSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADK 578

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           ++  + DR    D   Y+ +I G+C   + +    F  Q+
Sbjct: 579 VYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQM 618



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 228/480 (47%), Gaps = 36/480 (7%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
           A  VFD+MV             ++ L   G  Y+ L+  Y ++G   E++ +FA M+  G
Sbjct: 246 ARKVFDEMV-------------KEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292

Query: 143 IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIEN 196
           I   PD+V    L+  +  + ++ +   L R MR +G  + E     L++G  +KG +++
Sbjct: 293 IM--PDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDD 350

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A    R++ Q    P++V  N ++   C+ G++  A  L   +   G KP+VVT+ST+++
Sbjct: 351 ALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILS 410

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           A+CK      AFQL   M+E  ++PD I YS LI  L +  RL + + L    +  GL+ 
Sbjct: 411 AYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP 470

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D V ++S++D +   G+V RA+  +D M+  G LP+V++YS+LI GL +  R  EA  L 
Sbjct: 471 DEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
            ++      P+ + Y +L+   C++ +L+   +L                   + GLM +
Sbjct: 531 FKLYHEEPVPANIKYDALMR-CCRNAELKSVLALLK--------------GFCMKGLMNE 575

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A + +   +      +  +++ L+ G CR       +     M      P+  +   LIR
Sbjct: 576 ADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIR 635

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+  +G +  A  +  Q+L      D     A+I    K  N+   L +   M R+G+ P
Sbjct: 636 GLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 86/176 (48%)

Query: 429 LINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
           L +  +  A RFF   +   + PN++ +N L+   C      + + +   M      P+ 
Sbjct: 133 LSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNA 192

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+  L+      G +  A  L   M + GL P+++T++++++G+ K   +     +F  
Sbjct: 193 VTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDE 252

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M + G+APD   YN L+    K      AL +F ++T +G+ PD++T+ ++I   C
Sbjct: 253 MVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMC 308



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/292 (18%), Positives = 111/292 (38%), Gaps = 54/292 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS ++  Y + G    + ++   M + G+         L+  L +   +G  + L + M 
Sbjct: 405 YSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMI 464

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT--------------- 215
             G       Y  L++G  ++G +E A  +H ++++ G +P++VT               
Sbjct: 465 SLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTK 524

Query: 216 --------------------------CNK---------ILKRLCINGQIGNASSLFDVLL 240
                                     C +         +LK  C+ G +  A  ++  +L
Sbjct: 525 EAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSIL 584

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                 +   +S LI+  C+E  + KA   +  M++    P+      LI GLF+ G + 
Sbjct: 585 DRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVV 644

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           E ++++   L+     D     +++D  +  G+V   +     M   G LP+
Sbjct: 645 EADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 214/401 (53%), Gaps = 5/401 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P +VT N +L  LC   +I +A  LFD ++ +G +P+V+T+ST+IN  CK      A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            QL   M E    P+++ Y+ +ID L K   + E  +     +  G+  DV  +SS++  
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +  +G V  A   + +M+    +PN ++++ILI GLC++  + EA  +F  +  + LEP 
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
           + TY++L+DG+C   ++ +   L++ M ++G  P+    ++LIN     G + +A     
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +    +L P++F ++TLM G C++ R  +  +L   M  Y + P++IT+++++ G+   G
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A  L   M +  + P++  Y+ +I G+     +     +F  +   G+ P +  Y 
Sbjct: 305 HLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYT 364

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           V+++ L+K    + A +LF ++   G  P+  TYN II G+
Sbjct: 365 VMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGF 405



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 206/366 (56%), Gaps = 5/366 (1%)

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G +P +VTF+TL++  C +AK+  A +L++ M++M   PD+I YS +I+GL K G    
Sbjct: 4   LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             +LL    ++G K +VV +++++D+      V  A+  +  M+  G  P+V +YS ++ 
Sbjct: 64  ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C  GR+ EA  LF Q++ R + P+ +T++ LIDG CK   + + + +++ M ++GL+P
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D    + L++G      M +A + F    R    PN+  +N L++G C+  R  +   L 
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M   ++ PD+ T++ L+RG    G    A  L  +M   GL P++ITYS ++ GL K 
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
            ++     + K M+ + + P+I IY +L+  +     L+AA +LF  L  +G++P ++TY
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363

Query: 597 NTIICG 602
             +I G
Sbjct: 364 TVMISG 369



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 211/393 (53%), Gaps = 5/393 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NGL + G    A  + +++ ++G  PN+V  N I+  LC +  +  A   F  +
Sbjct: 47  TYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEM 106

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  P+V T+S++++ FC   ++ +A  L+  M+E +++P+ + ++ILIDGL K   +
Sbjct: 107 VKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMI 166

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   +  T  ++GL+ DV  +++++D Y     +  A + ++ M   G  PNV SY+IL
Sbjct: 167 SEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNIL 226

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+ GR+ EA GL  ++  + L P + TYS+L+ GFC+ G+ ++   L   M   GL
Sbjct: 227 INGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGL 286

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ +  S++++GL     + +A           + PN+FI+  L++G C   +     +
Sbjct: 287 LPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARE 346

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  + +  I+P V+T+TV+I G+   G  + A  LF +M   G  P+  TY+ II G  
Sbjct: 347 LFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFL 406

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           +  +    + + + M   G + D + + +L ++
Sbjct: 407 RNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDL 439



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 178/337 (52%), Gaps = 5/337 (1%)

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M ++ L P L+ ++ L+ GL    ++ +  +L    +  G + DV+ +S++++    +G+
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
              A+Q   +M   G  PNV++Y+ +I  LC+   + EA   F +++   + P + TYSS
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           ++ GFC  G++ +  SL+  M++R + P+ V  ++LI+GL     + +A   F       
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           L P+++ +N L+DG C   +  +  KLF +M      P+V ++ +LI G    G +  A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  +M  + LTPD+ TYS ++ G  +         + K M   G+ P++  Y+++L+ L
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            K  +LD A +L   + +  +EP+I  Y  +I G C+
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCT 337



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 154/268 (57%), Gaps = 5/268 (1%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M   G  P +++++ L+ GLC + ++++A  LF +++    EP ++TYS++I+G CK G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNT 458
                 L   M ++G KP+ V  + +I+ L  D     A+ FF + V+  + P++F +++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C L R  +   LF  M   N+ P+ +T T+LI G+  +  +S A L+F  M ++G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           L PDV TY+A++ G      +     +F +M+R G AP++  YN+L+N   K   +D A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSL 606
            L  +++ + L PDI TY+T++ G+C +
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQV 268



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 202/418 (48%), Gaps = 38/418 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS +I    ++G    ++++   M + G    P++V    ++  L     V +       
Sbjct: 48  YSTIINGLCKMGNTTMALQLLKKMEEKGC--KPNVVAYNTIIDSLCKDRLVTEAMDFFSE 105

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  +++G    G +  A  + +Q+++R  +PN VT   ++  LC    
Sbjct: 106 MVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRM 165

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  +F+ +   G +P+V T++ L++ +C  +++++A +L+N+M      P++  Y+I
Sbjct: 166 ISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNI 225

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+G  K+GR+ E   LL     + L  D+  +S++M  +  +G    A +    M + G
Sbjct: 226 LINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYG 285

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LPN+I+YSI++ GLC+ G L EA  L   +   ++EP++  Y+ LI+G C  GKL    
Sbjct: 286 LLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAAR 345

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L+ N+  +G++P  V  +++I+GL+   L                              
Sbjct: 346 ELFSNLFVKGIQPTVVTYTVMISGLLKGGL------------------------------ 375

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           + +  +LF  M +    P+  T+ V+I+G    G   +A+ L  +M+ +G + D  T+
Sbjct: 376 SNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTF 433



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 199/450 (44%), Gaps = 56/450 (12%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVI 92
           + I+  L K  N T A+Q  K        PN+     +I  L +  +   A   F +MV 
Sbjct: 49  STIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVK 108

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           + G   + F             YS ++  +  +G+++E+  +F  M +  +   P+ V  
Sbjct: 109 E-GIPPDVFT------------YSSILHGFCNLGRVNEATSLFKQMVERNVI--PNKV-- 151

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                                       +  L++GL +K +I  A+ +   + ++G  P+
Sbjct: 152 ---------------------------TFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           + T N ++   C   Q+  A  LF+++   G  PNV +++ LIN  CK  ++++A  L  
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M    L PD+  YS L+ G  + GR +E  ELL      GL  +++ +S V+D     G
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
            +  A +    M      PN+  Y+ILI+G+C  G+L  A  LF  + ++ ++P+++TY+
Sbjct: 305 HLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYT 364

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRM 447
            +I G  K G   +   L+  M   G  P++   +++I G +  GD   A+R   + V  
Sbjct: 365 VMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGK 424

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
               +   F  L D    L+ + + +  FM
Sbjct: 425 GFSADSSTFRMLSD----LESSDEIISQFM 450


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 255/485 (52%), Gaps = 15/485 (3%)

Query: 129 DESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG-----FCVY 181
           D++V  F  M  + ++  P +V   +L+S ++ +        LC  +  KG         
Sbjct: 37  DDAVSTFHRM--LHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTL 94

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
              +N L   G +  AF +  ++++RGF  +  T   ++K LC+ G+   A +L+D  + 
Sbjct: 95  SIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVS 154

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G   + V + TLIN  CK  K   A +L   M +  + P+LI+Y++++DGL K G + E
Sbjct: 155 KGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTE 214

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM-LNGGFLPNVISYSILI 360
              L    + +G+ +DV  ++S++  + G G    AV+  + M +     P+V +++IL+
Sbjct: 215 ACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILV 274

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC+ G + EA  +FG ++ R LEP +++ ++L++G+C  G + +   ++D M++RG  
Sbjct: 275 DALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKL 334

Query: 421 PDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ +  S LING     ++ +ALR   +  +  L+P+   +N L+DG  +  R      L
Sbjct: 335 PNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDL 394

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M      PD+IT+ VL+     +  L  A+ LF  ++  G++P++ TY+ +I GL K
Sbjct: 395 VEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCK 454

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           G  +     +F+L+   G  P+I  YN+++N L +E  LD A  L  ++ D G  P+ +T
Sbjct: 455 GGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVT 514

Query: 596 YNTII 600
           ++ ++
Sbjct: 515 FDPLV 519



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 217/424 (51%), Gaps = 7/424 (1%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG-PKP 246
           L +    ++A     +++     P+IV+ NK+L  +          SL   L   G PKP
Sbjct: 30  LPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKP 89

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           ++VT S  IN+     ++  AF +   +++     D    + L+ GL   GR  E   L 
Sbjct: 90  SLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLY 149

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
             A+ +G   D V + ++++    +G    A++   +M  GG  PN+I Y++++ GLC++
Sbjct: 150 DHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKE 209

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI-KRGLKPDAVV 425
           G + EACGL  +++ + +   + TY+SLI GFC +G+ +    L + M+ K  ++PD   
Sbjct: 210 GLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYT 269

Query: 426 CSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            ++L++     G++ +A   F   ++  L P++   N LM+G C     ++  ++F  M 
Sbjct: 270 FNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMV 329

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                P+VI+++ LI G      +  A+ L  +M +R L PD +TY+ ++ GL K   + 
Sbjct: 330 ERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVL 389

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               + + M  +G APD+  YNVLL+  +K   LD AL LF  + D G+ P+I TYN +I
Sbjct: 390 YEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILI 449

Query: 601 CGYC 604
            G C
Sbjct: 450 DGLC 453



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 217/430 (50%), Gaps = 10/430 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S  I +   +G++  +  + A +   G  + P  +  LM  L       +   L      
Sbjct: 95  SIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVS 154

Query: 176 KGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           KGF      Y  L+NGL + G   +A  + R++ + G  PN++  N ++  LC  G +  
Sbjct: 155 KGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTE 214

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM-MEMDLVPDLIIYSILI 290
           A  L   ++  G   +V T+++LI+ FC   + + A +L N M M+ D+ PD+  ++IL+
Sbjct: 215 ACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILV 274

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L K G + E   +    + RGL+ DVV  +++M+ +   G +  A + +DRM+  G L
Sbjct: 275 DALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKL 334

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNVISYS LI G C+   + EA  L  ++  R L P  +TY+ L+DG  KSG++   + L
Sbjct: 335 PNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDL 394

Query: 411 YDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            + M   G  PD +  ++L++  +       AL  F   V   + PN+  +N L+DG C+
Sbjct: 395 VEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCK 454

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             R     ++F L+ +   +P++ T+ ++I G+  +G L  A  L  +M+  G  P+ +T
Sbjct: 455 GGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVT 514

Query: 526 YSAIIHGLFK 535
           +  ++  L +
Sbjct: 515 FDPLVRALLE 524



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 190/384 (49%), Gaps = 44/384 (11%)

Query: 95  GKTYNFFRLFRDSLGD-FGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           G+T+    L+  ++   F  D   Y  LI    ++GK  +++E+   M   G+  +  + 
Sbjct: 140 GRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMY 199

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFC------------------------------- 179
             ++  L     V +   LC  M GKG C                               
Sbjct: 200 NMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVM 259

Query: 180 -------VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                  VY F  L++ L + G++  A ++   +I+RG  P++V+CN ++   C+ G + 
Sbjct: 260 KEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMS 319

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +FD ++  G  PNV+++STLIN +CK   +++A +L   M + +LVPD + Y+ L+
Sbjct: 320 EAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLL 379

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K+GR+    +L+      G   D++ ++ ++D Y+    + +A+  +  +++ G  
Sbjct: 380 DGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGIS 439

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN+ +Y+ILI GLC+ GR+  A  +F  + ++   P++ TY+ +I+G  + G L +  +L
Sbjct: 440 PNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEAL 499

Query: 411 YDNMIKRGLKPDAVVCSLLINGLM 434
              M+  G  P+AV    L+  L+
Sbjct: 500 LLEMVDDGFPPNAVTFDPLVRALL 523



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 135/262 (51%), Gaps = 6/262 (2%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++++ SI I  L   G++  A  +  +++ R       T ++L+ G C  G+  +  +L
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148

Query: 411 YDNMIKRGLKPDAVVCSLLINGL--MG---DALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           YD+ + +G   D V    LINGL  MG   DA+    +  +  + PNL ++N ++DG C+
Sbjct: 149 YDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCK 208

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-LKRGLTPDVI 524
               T+   L   M    I  DV T+  LI G    G    A+ L  +M +K  + PDV 
Sbjct: 209 EGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVY 268

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           T++ ++  L K   ++   ++F LM + G+ PD+   N L+N       +  A ++F ++
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
            +RG  P++I+Y+T+I GYC +
Sbjct: 329 VERGKLPNVISYSTLINGYCKV 350



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 131/260 (50%), Gaps = 12/260 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--------LMSCLVDSNSVGQY 166
           ++ L++   ++G + E+  +F  M   G  L PD+V          L  C+ ++  V  +
Sbjct: 270 FNILVDALCKLGMVAEARNVFGLMIKRG--LEPDVVSCNALMNGWCLRGCMSEAKEV--F 325

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            ++    +      Y  L+NG  +  +++ A  +  ++ QR  VP+ VT N +L  L  +
Sbjct: 326 DRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKS 385

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++     L + +   G  P+++T++ L++ + K   L+KA  L+  +++  + P++  Y
Sbjct: 386 GRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTY 445

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +ILIDGL K GR+K   E+      +G + ++  ++ +++     G +  A      M++
Sbjct: 446 NILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVD 505

Query: 347 GGFLPNVISYSILIKGLCQQ 366
            GF PN +++  L++ L ++
Sbjct: 506 DGFPPNAVTFDPLVRALLEK 525


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 229/439 (52%), Gaps = 6/439 (1%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           G  V++ L +  +  G++E A     ++     +P   +CN +L RL  +G        F
Sbjct: 159 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 218

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + ++  G  P+V T++ +I+  CKE  LE + +L+  M EM L PD++ Y+ LIDG  K 
Sbjct: 219 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 278

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G L+E   L     D G   D++ ++ +++ Y     + RA + +  M N G  PNV++Y
Sbjct: 279 GSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTY 338

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           S LI   C++G +  A  L   +    L P+  TY+SLID  CK+G L + + L ++M++
Sbjct: 339 STLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ 398

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G+K + V  + L++GL     M +A   F   ++  + PN  ++  L+ G  + +R  D
Sbjct: 399 AGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMED 458

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            +K+   M   NIKPD+I +  +I G  SQ  L    L+  +M  RG++ + +  + II 
Sbjct: 459 AMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIID 518

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             FK    S  L+ F+ M+  GV   I  Y VL++ L +   ++ A+  F ++   GL+P
Sbjct: 519 AYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQP 578

Query: 592 DIITYNTIICGYCSLNSCL 610
           ++  Y ++I G C  N+C+
Sbjct: 579 NVAVYTSLIDGLCX-NNCI 596



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 147/579 (25%), Positives = 282/579 (48%), Gaps = 21/579 (3%)

Query: 46  NNPTPAIQFFKWTHNCVSSPNIAQ----LIHVLLQ----SDMRDVASHVFDKMVIQFG-K 96
            +P  A++FFKW  + V   +  +    ++H++ +    +D  D    V     +  G  
Sbjct: 82  EDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFP 141

Query: 97  TYNFFRLF---RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
             N F +    R+        +  L   +V +G ++E+ E F+ M +            L
Sbjct: 142 VCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFL 201

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +  L  S +     K    M G G       Y  +++ L ++G +EN+  +  Q+ + G 
Sbjct: 202 LHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGL 261

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P++VT N ++      G +   +SLF+ +  VG  P+++T++ LIN +CK  K+ +AF+
Sbjct: 262 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 321

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
            ++ M    L P+++ YS LID   K G ++   +LL      GL  +   ++S++DA  
Sbjct: 322 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANC 381

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G++  A +  + ML  G   N+++Y+ L+ GLC+ GR++EA  +F  +L   + P+  
Sbjct: 382 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 441

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSV 445
            Y++L+ G+ K+ ++ D   +   M +  +KPD ++   +I G       +  +   + +
Sbjct: 442 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 501

Query: 446 RMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           +   I  N  I  T++D   +  +++D +  F  M    ++  ++T+ VLI G+   G +
Sbjct: 502 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIV 561

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+  F +ML  GL P+V  Y+++I GL     I     +F  M+  G+ PDI  +  L
Sbjct: 562 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTAL 621

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           ++  +K  NL  AL L  ++T+  +E D+  Y +++ G+
Sbjct: 622 IDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 660



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 241/507 (47%), Gaps = 47/507 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+   + G ++ S  +F  M +MG  LSPD+V                        
Sbjct: 233 YNVMIDYLCKEGDLENSRRLFVQMREMG--LSPDVV------------------------ 266

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++G  + G +E    +  ++   G VP+I+T N ++   C   ++  A  
Sbjct: 267 -----TYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 321

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            F  +   G KPNVVT+STLI+AFCKE  ++ A +L   M    L+P+   Y+ LID   
Sbjct: 322 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANC 381

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           KAG L E  +LL   L  G+KL++V +++++D     G +  A + +  ML  G  PN  
Sbjct: 382 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 441

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ L+ G  +  R+ +A  +  Q+    ++P L+ Y S+I G C   KL +   + + M
Sbjct: 442 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 501

Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
             RG+  + V+ + +I+     G   DAL FF +   + +   +  +  L+DG C     
Sbjct: 502 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIV 561

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              V  F  M    ++P+V  +T LI G+     + SA  LF +M  RG+TPD+  ++A+
Sbjct: 562 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTAL 621

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  K  N+   L +   M    +  D+ +Y  L++   +   L  A K F ++ ++G+
Sbjct: 622 IDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 681

Query: 590 EPDIITYNTIICGYCSLNSCLIDGYFK 616
            P+      ++C       CL+  Y+K
Sbjct: 682 LPE-----EVLC------ICLLREYYK 697



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 204/457 (44%), Gaps = 43/457 (9%)

Query: 106 DSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLV 158
           + + D GC      Y+ LI  Y +  K+  + E F+ M + G  L P++V    L+    
Sbjct: 289 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG--LKPNVVTYSTLIDAFC 346

Query: 159 DSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIV 214
               +    KL   MR  G    EF    L+    + G +  A+ +   ++Q G   NIV
Sbjct: 347 KEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 406

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T   +L  LC  G++  A  +F  +L  G  PN   ++ L++ + K  ++E A ++   M
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            E ++ PDLI+Y  +I G     +L+E   +L     RG+  + V+ ++++DAY   G  
Sbjct: 467 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 526

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A+  +  M + G    +++Y +LI GLC+ G +  A   F ++L   L+P++  Y+SL
Sbjct: 527 SDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSL 586

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           IDG C +  +     L+D M  RG+ PD                                
Sbjct: 587 IDGLCXNNCIESAKKLFDEMQCRGMTPDITA----------------------------- 617

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            F  L+DG  +     + + L   M    I+ D+  +T L+ G +  G L  A   F +M
Sbjct: 618 -FTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEM 676

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           +++G+ P+ +    ++   +K   +   + +   MER
Sbjct: 677 IEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER 713



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 72/164 (43%)

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
           S R   +    +F+ L      L    +  + F  M  +   P   +   L+  ++  G+
Sbjct: 151 STRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGN 210

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
                  F  M+  G+ P V TY+ +I  L K  ++     +F  M   G++PD+  YN 
Sbjct: 211 GQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNS 270

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++   K  +L+    LF ++ D G  PDIITYN +I  YC   
Sbjct: 271 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFE 314


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 258/523 (49%), Gaps = 14/523 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIF-AYMSDMGIYLSPDLVQRLMSCLV 158
           F RL R  L       + +++      + D++V++    M+++G          ++  L 
Sbjct: 31  FGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLC 90

Query: 159 DSNSVGQYYKLCRAM-RGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           D N   Q   L R M + +G C      Y  +++G  ++G I  A +++ +++Q+GFVP+
Sbjct: 91  DDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPD 150

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +VT N I+  LC    + NA  L   ++  G  PN VT++++I+ +    + E+A +++ 
Sbjct: 151 VVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFR 210

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M    L+PD++ ++  +D L K GR KE  E+  +   +G + ++V +  ++  Y   G
Sbjct: 211 EMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEG 270

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
                +  ++ M   G + N + ++ILI    ++G + EA  +  ++  + L P + TYS
Sbjct: 271 CFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYS 330

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRM 447
           +LI   C+ G+L D    ++ MI  G++P+ VV   LI G    GD   A    ++ +  
Sbjct: 331 TLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNN 390

Query: 448 TLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
            +  PN+  FN+++   C+  R  D   +F L+     + D+I    LI G    G +  
Sbjct: 391 GIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGK 450

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +   M+  G+ PD  TY+ +++G FK   I  GL++F+ M    + P    YN++L+
Sbjct: 451 AFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILD 510

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            L +     AA K+  ++   G    + TYN I+ G C  N+C
Sbjct: 511 GLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCR-NNC 552



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 243/498 (48%), Gaps = 14/498 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  + + GKI ++  ++  M   G    PD+V    +++ L  + +V     L R 
Sbjct: 119 YNTVIHGFFKEGKIGKACNLYHEMMQQGFV--PDVVTHNSIINALCKARAVDNAELLLRQ 176

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  +++G    G  E A  M R++  RG +P+IV+ N  +  LC +G+
Sbjct: 177 MVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGR 236

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A+ +F  +   G +PN+VT+  L++ +  E         +N M    +V + ++++I
Sbjct: 237 SKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTI 296

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID   K G + E   +L     +GL  DV  +S+++ A   +G +  AV  +++M+  G
Sbjct: 297 LIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG 356

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL-EPSLLTYSSLIDGFCKSGKLRDG 407
             PN + Y  LI+G C  G LV+A  L  +++   +  P++  ++S++   CK G++ D 
Sbjct: 357 VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDA 416

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             ++D +   G + D ++ + LI+G      MG A       +   + P+ F +NTL++G
Sbjct: 417 HHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNG 476

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +  R  D + LF  M    IKP  +T+ +++ G+   G   +A  +  +M+  G T  
Sbjct: 477 YFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVS 536

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           + TY+ I+ GL +       + MF+ +    V  +I   N ++N +      + A  LF 
Sbjct: 537 LPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFS 596

Query: 583 QLTDRGLEPDIITYNTII 600
            ++D GL P+  TY  +I
Sbjct: 597 AISDSGLVPNASTYGIMI 614



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 226/482 (46%), Gaps = 55/482 (11%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA------- 232
            Y  +MNG  R    E       ++++ G   +    N +LK LC   +  +A       
Sbjct: 10  TYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRR 69

Query: 233 --------------------------SSLFDVLLLVGPK-----PNVVTFSTLINAFCKE 261
                                         D+L ++  +     P+VVT++T+I+ F KE
Sbjct: 70  MTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKE 129

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            K+ KA  LY+ MM+   VPD++ ++ +I+ L KA  +     LL   +D G+  + V +
Sbjct: 130 GKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTY 189

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +S++  Y  +G    A + +  M   G +P+++S++  +  LC+ GR  EA  +F  +  
Sbjct: 190 TSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAA 249

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGD 436
           +   P+++TY  L+ G+   G   D  S ++ M   G+  + +V ++LI+     G+M +
Sbjct: 250 KGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDE 309

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A+    +     L P++F ++TL+   CR+ R  D V  F  M    ++P+ + +  LI+
Sbjct: 310 AMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQ 369

Query: 497 GIASQGSLSSAILLFFQMLKRGLT-PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           G  + G L  A  L ++M+  G+  P++  +++I+H + K   +    H+F L++  G  
Sbjct: 370 GFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGER 429

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
            DI ++N L++       +  A  +   +   G+ PD  TYNT           L++GYF
Sbjct: 430 SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNT-----------LVNGYF 478

Query: 616 KS 617
           KS
Sbjct: 479 KS 480



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 163/330 (49%), Gaps = 9/330 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ LI+ Y + G +DE++ I + M   G  LSPD+     L+S L     +         
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQG--LSPDVFTYSTLISALCRMGRLADAVDKFNQ 351

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCING 227
           M G G      VY  L+ G    G +  A  +  +++  G   PNI   N I+  +C  G
Sbjct: 352 MIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEG 411

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ +A  +FD++  +G + +++ F+TLI+ +C   ++ KAF + + M+   + PD   Y+
Sbjct: 412 RVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYN 471

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L++G FK+GR+ +G  L     D+ +K   V ++ ++D     G    A +    M+  
Sbjct: 472 TLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGC 531

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G   ++ +Y+I++KGLC+     EA  +F ++    ++ ++ T +++I+      +  + 
Sbjct: 532 GTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEA 591

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
             L+  +   GL P+A    ++I  L+ + 
Sbjct: 592 KDLFSAISDSGLVPNASTYGIMIRNLLKEG 621



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 120/234 (51%), Gaps = 12/234 (5%)

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
           +R   P++ TY  +++G C++ +   G + +  +++ GLK D    + ++  L       
Sbjct: 1   MRVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTD 60

Query: 436 DALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN--IKPDVIT 490
           DA++   +  RMT    +P+ F +  ++   C   R+   + L  +M        PDV+T
Sbjct: 61  DAVKVLLR--RMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVT 118

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  +I G   +G +  A  L+ +M+++G  PDV+T+++II+ L K + +     + + M 
Sbjct: 119 YNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMV 178

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            NGV P+   Y  +++        + A K+F ++T RGL PDI+++N+ +   C
Sbjct: 179 DNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLC 232



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 123/270 (45%), Gaps = 9/270 (3%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS- 409
           P + +Y +++ G C+  R       FG++L   L+      ++++   C + +  D    
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLI--PNLFIFNTLMDG 462
           L   M + G  PDA   ++++  L  D     AL       +   +  P++  +NT++ G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +  +      L+  M      PDV+TH  +I  +    ++ +A LL  QM+  G+ P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +TY+++IHG            MF+ M   G+ PDI  +N  ++ L K      A ++F 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSCLID 612
            +  +G  P+I+TY  ++ GY +   C  D
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYAT-EGCFAD 274



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/305 (20%), Positives = 135/305 (44%), Gaps = 40/305 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI    R+G++ ++V+ F  M   G+  +  +   L+        + +  +L   M 
Sbjct: 329 YSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMM 388

Query: 175 GKGF-----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             G        +  +++ + ++G + +A H+   V   G   +I+  N ++   C+ G++
Sbjct: 389 NNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEM 448

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           G A S+ D ++  G  P+  T++TL+N + K  +++    L+  M +  + P  + Y+I+
Sbjct: 449 GKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNII 508

Query: 290 IDGLFKAGRLKEGNELLLTALDRG-----------------------------------L 314
           +DGLF+AGR     ++L   +  G                                   +
Sbjct: 509 LDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNV 568

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
           K ++   ++++++   +     A   +  + + G +PN  +Y I+I+ L ++G + EA  
Sbjct: 569 KFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADN 628

Query: 375 LFGQV 379
           +F  +
Sbjct: 629 MFSSM 633


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 246/492 (50%), Gaps = 10/492 (2%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--V 180
           +    +DE++  F  M       S     RL++ +  +        L R M   G    V
Sbjct: 21  LHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDV 80

Query: 181 YEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           Y    ++N L     ++ AF    ++++ G  P+  T   +++ LC+ G+IG A  LFD 
Sbjct: 81  YTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 140

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           ++  G +PNVVT+ TLIN  CK+ ++ +AF +++ M+   + P+++ Y+ LI GL K   
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            K    L+   +D  +  DV   ++V+DA    G V  A    D M++ G  PNV++Y+ 
Sbjct: 201 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 260

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ G C +  +  A  +F  ++ +    ++++Y++LI+G+CK   +     L++ M ++ 
Sbjct: 261 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 320

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           L P+ V  + LI+GL     + DA+  F + V    IP+L  + TL D  C+ +     +
Sbjct: 321 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 380

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   +   N  PD+  +T ++ G+   G L  A  LF  +  +GL P+V TY+ +IHGL
Sbjct: 381 ALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 440

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K   ++    +F  M +NG +P+   YN++    ++       ++L  ++  RG   D+
Sbjct: 441 CKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 500

Query: 594 ITYNTIICGYCS 605
            T  T++ G  S
Sbjct: 501 ST-TTLLVGMLS 511



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 219/405 (54%), Gaps = 6/405 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+ GL  +G I  A H+  ++I  GF PN+VT   ++  LC + Q+  A ++F  +
Sbjct: 117 TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEM 176

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PN+VT+++LI+  CK  + +    L N M++  ++PD+   + ++D L K G +
Sbjct: 177 ITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMV 236

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E ++++   + RG++ +VV ++++MD +    +V  AV+ +D M++   + NVISY+ L
Sbjct: 237 AEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTL 296

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+   + +A  LF ++  + L P+ +TY++LI G C  G+L+D  SL+  M+ RG 
Sbjct: 297 INGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 356

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V    L + L     +  A+            P++ I+ T++DG CR     D   
Sbjct: 357 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARD 416

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  +    ++P+V T+ ++I G+  QG L+ A  LF +M K G +P+  TY+ I  G  
Sbjct: 417 LFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 476

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
           +       + + + M   G + D++   +L+ ML  +  LD ++K
Sbjct: 477 RNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDD-GLDQSVK 520



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/545 (23%), Positives = 244/545 (44%), Gaps = 68/545 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +++   R G+++++ ++F+ +S  G+  +      ++  L     + +  KL   M 
Sbjct: 398 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 457

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING--- 227
             G     C Y  +  G LR         +  +++ RGF  ++ T   ++  L  +G   
Sbjct: 458 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQ 517

Query: 228 -------------------------------------------QIGNASSLFDVLLLVGP 244
                                                       + +A S F+ +L + P
Sbjct: 518 SVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHP 577

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
            P+ V F+ L+ +  K         L   M    + PD+   +ILI+      RL     
Sbjct: 578 PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFS 637

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +L   L  G + DVV + ++M+                +M+  G  P++ +Y+ LI  LC
Sbjct: 638 VLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALC 684

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
                     L  +++  ++ P+++ +S+++D  CK G +     + D MIKRG++PD V
Sbjct: 685 NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVV 744

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + L++G      M +A++ F   V    +PN+  +N L++G C+++R    + L   M
Sbjct: 745 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 804

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
            +  +  D +T+  LI G+   G L  AI LF +M+  G  PD++TY  ++  L K  ++
Sbjct: 805 SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHL 864

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +  + + K +E + +  DI +YN+ ++ + +   L+AA  LF  L+ +GL+PD+ TYN +
Sbjct: 865 AEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIM 924

Query: 600 ICGYC 604
           I G C
Sbjct: 925 IHGLC 929



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 205/414 (49%), Gaps = 5/414 (1%)

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           RQ+   G  P++ T   ++  LC   ++  A S    +L +G +P+  TF+TLI   C E
Sbjct: 69  RQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVE 128

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            K+ +A  L++ M+     P+++ Y  LI+GL K  ++ E   +    + +G+  ++V +
Sbjct: 129 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTY 188

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +S++     + +        + M++   +P+V + + ++  LC++G + EA  +   ++ 
Sbjct: 189 NSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 248

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           R +EP+++TY++L+DG C   ++     ++D M+ +    + +  + LING      +  
Sbjct: 249 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 308

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A+  F +  R  L PN   +NTL+ G C + R  D + LF  M      PD++T+  L  
Sbjct: 309 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 368

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
            +     L  A+ L   +      PD+  Y+ I+ G+ +   +     +F  +   G+ P
Sbjct: 369 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQP 428

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
           ++  YN++++ L K+  L  A KLF ++   G  P+  TYN I  G+   N  L
Sbjct: 429 NVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 482



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 148/626 (23%), Positives = 263/626 (42%), Gaps = 144/626 (23%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
           A H+FDKM+ +          F+ ++  +G     LI    +  ++ E+  IF+ M   G
Sbjct: 134 ALHLFDKMIGEG---------FQPNVVTYGT----LINGLCKDRQVTEAFNIFSEMITKG 180

Query: 143 IYLSPDLVQ------------------RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFL 184
           I  SP++V                    LM+ +VDS  +   + L              +
Sbjct: 181 I--SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL------------NTV 226

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++ L ++G++  A  +   +I RG  PN+VT N ++   C+  ++  A  +FD ++    
Sbjct: 227 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 286

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
             NV++++TLIN +CK   ++KA  L+  M   +L P+ + Y+ LI GL   GRL++   
Sbjct: 287 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 346

Query: 305 L------------LLT------------ALDRGLKL-----------DVVVFSSVMDAYV 329
           L            L+T             LD+ + L           D+ ++++++D   
Sbjct: 347 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 406

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G++  A   +  + + G  PNV +Y+I+I GLC+QG L EA  LF ++      P+  
Sbjct: 407 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 466

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGL----------- 433
           TY+ +  GF ++ +      L + M+ RG   D    +LL+     +GL           
Sbjct: 467 TYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKP 526

Query: 434 -----------------------------------MGDALRFFFQSVRMTLIPNLFIFNT 458
                                              + DAL  F + + M   P+   F  
Sbjct: 527 SSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTK 586

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+    ++K  +  + L   M  + I PDV T  +LI        L  A  +  ++LK G
Sbjct: 587 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 646

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             PDV+TY  +++GL K             M   G++PDI  YN L++ L   C      
Sbjct: 647 FQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVT 693

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYC 604
            L  ++ +  + P+++ ++T++   C
Sbjct: 694 TLLNEMVNSKIMPNVVVFSTVVDALC 719



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 189/397 (47%), Gaps = 25/397 (6%)

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
            HMH         P+ V   K+L  +          SL   +   G  P+V T + LIN+
Sbjct: 573 LHMHPP-------PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINS 625

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           FC   +L  AF +   ++++   PD++ Y  L++GL K              + +G+  D
Sbjct: 626 FCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKM-------------ITKGISPD 672

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           +  ++S++ A   + +        + M+N   +PNV+ +S ++  LC++G +  A  +  
Sbjct: 673 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 732

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
            ++ R +EP ++TY++L+DG C   ++ +   ++D M+ +G  P+    ++LING     
Sbjct: 733 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 792

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            M  A+    Q     LI +   +NTL+ G C + R    + LF  M      PD++T+ 
Sbjct: 793 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 852

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           +L+  +     L+ A++L   +    L  D++ Y+  I G+ +   +     +F  +   
Sbjct: 853 ILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSK 912

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           G+ PD+  YN++++ L K   LD A KLF ++ +  +
Sbjct: 913 GLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDI 949



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/577 (21%), Positives = 236/577 (40%), Gaps = 108/577 (18%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
           DVA  VFD MV             +D + +    Y+ LI  Y +I  +D+++ +F  MS 
Sbjct: 272 DVAVKVFDTMV------------HKDCVANV-ISYNTLINGYCKIQSVDKAMYLFEEMSR 318

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHM 200
               L+P+ V                              Y  L++GL   G +++A  +
Sbjct: 319 QE--LTPNTV-----------------------------TYNTLIHGLCHVGRLQDAISL 347

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             +++ RG +P++VT   +   LC N  +  A +L   +      P++  ++T+++  C+
Sbjct: 348 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 407

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
             +LE A  L++ +    L P++  Y+I+I GL K G L E ++L       G   +   
Sbjct: 408 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 467

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG------------- 367
           ++ +   ++   +  R ++  + ML  GF  +V + ++L+  L   G             
Sbjct: 468 YNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPS 527

Query: 368 ---------------------------------RLVEACGLFGQVLIRRLEPSLLTYSSL 394
                                             L +A   F ++L     PS + ++ L
Sbjct: 528 SSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKL 587

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           +    K        SL   M   G+ PD    ++LIN       +G A     + +++  
Sbjct: 588 LTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGF 647

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            P++  + TLM+G C+             M    I PD+ T+  LI  + +         
Sbjct: 648 QPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTT 694

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           L  +M+   + P+V+ +S ++  L K   I++   +  +M + GV PD+  Y  L++   
Sbjct: 695 LLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHC 754

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
               +D A+K+F  +  +G  P++ +YN +I GYC +
Sbjct: 755 LRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 791



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 136/278 (48%), Gaps = 5/278 (1%)

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A+ T++RML+    P+ + ++ L+  + +         L  Q+    + P + T + +I
Sbjct: 28  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 87

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI 450
           +  C   ++   FS    ++K G +PDA   + LI GL     +G+AL  F + +     
Sbjct: 88  NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 147

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN+  + TL++G C+ ++ T+   +F  M    I P+++T+  LI G+           L
Sbjct: 148 PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 207

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
             +M+   + PDV T + ++  L K   ++    +  +M   GV P++  YN L++    
Sbjct: 208 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 267

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
              +D A+K+F  +  +    ++I+YNT+I GYC + S
Sbjct: 268 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 305



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 105/200 (52%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  LM+G   +  ++ A  +   ++ +G VPN+ + N ++   C   ++  A  L + +
Sbjct: 745 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 804

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            L G   + VT++TLI+  C   +L+ A  L++ M+    +PDL+ Y IL+D L K   L
Sbjct: 805 SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHL 864

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   LL       L  D++V++  +D     G++  A   +  + + G  P+V +Y+I+
Sbjct: 865 AEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIM 924

Query: 360 IKGLCQQGRLVEACGLFGQV 379
           I GLC++G L EA  LF ++
Sbjct: 925 IHGLCKRGLLDEANKLFRKM 944



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 84/173 (48%)

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + +AL  F + +     P+   FN L+    + K  +  + L   M  + I PDV T  +
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I  +     +  A     ++LK G  PD  T++ +I GL     I   LH+F  M   G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             P++  Y  L+N L K+  +  A  +F ++  +G+ P+I+TYN++I G C L
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 198


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 251/508 (49%), Gaps = 17/508 (3%)

Query: 110 DFGC-----DYSFLIENYVRIGKIDESVEIFAYMSD-MGIYLSPDLVQ--RLMSCLVDSN 161
           + GC      Y+ L++ +    + +E++E+   M+D  G    P++V    +++      
Sbjct: 158 ELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEG 217

Query: 162 SVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            V + Y L   M  +G       Y  +++GL +  V++ A  + +Q+I +G  P+  T N
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYN 277

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++      G+      + + +   G KP+  T+ +L+N  C   +  +A   ++ M+  
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRK 337

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + P++ IY ILI G    G L E ++LL   ++ GL  D  +F+ +  AY     +  A
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +  +++M   G  P+V+++  LI  LC+ GR+ +A   F Q++   + P++  ++SL+ G
Sbjct: 398 MHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPN 452
            C   K       Y  M+ +G++PD V     +C+L   G +  A R      R+   P+
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPD 517

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  + TL+ G C + R  +  K   +M    +KPD  T+  L+ G    G +  A  +F 
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +ML+ G+TP V+TYS I+HGLF  +  S    ++  M  +G   +I IYN++LN L K  
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTII 600
            +D A KLF  L  +  + +I T+N +I
Sbjct: 638 CVDEAFKLFQSLCSKDFQLEITTFNIMI 665



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 227/474 (47%), Gaps = 50/474 (10%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
            C Y  L+    R G +E+ F     +++ G+  N +  N++LK LC   ++  A    D
Sbjct: 94  LCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA---MD 150

Query: 238 VLLLVGPK----PNVVTFSTLINAFCKEAKLEKAFQLYNLMME---MDLVPDLIIYSILI 290
           +L+   P+    P+VV+++TL+  FC E + E+A +L ++M +       P+++ Y+ +I
Sbjct: 151 ILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVI 210

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G F  G++ +   L L  +DRG++ +VV +++V+D       V RA   + +M++ G  
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +Y+ LI G    G+  E   +  ++    L+P   TY SL++  C +G+ R+    
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330

Query: 411 YDNMIKRGLKPDAVVCSLLING-------------------------------------- 432
           +D+MI++G+KP+  +  +LI+G                                      
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 433 --LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
             ++ +A+  F +  +  L P++  F  L+D  C+L R  D V  F  M    + P++  
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
              L+ G+ +      A   +F+ML +G+ PDV+ ++ I+  L     +     +  LME
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           R G  PD+  Y  L+        +D A K    +   GL+PD  TYNT++ GYC
Sbjct: 511 RVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 255/550 (46%), Gaps = 29/550 (5%)

Query: 65  PNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           PN+     +I  L ++ + D A  VF +M+ +  K  N      D+       Y+ LI  
Sbjct: 236 PNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDN------DT-------YNCLIHG 282

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF- 178
           Y+ IGK  E V +   MS  G  L PD      L++ L ++    +      +M  KG  
Sbjct: 283 YLSIGKWKEVVRMLEEMSAHG--LKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIK 340

Query: 179 ---CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
               +Y  L++G   KG +     +   +++ G  P+    N I         I  A  +
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F+ +   G  P+VV F  LI+A CK  +++ A   +N MM   + P++ +++ L+ GL  
Sbjct: 401 FNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCT 460

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
             + ++  E     L++G++ DVV F++++      G V +A +  D M   G  P+VIS
Sbjct: 461 VDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVIS 520

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI G C  GR+ EA      +L   L+P   TY++L+ G+C++G++ D + ++  M+
Sbjct: 521 YTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREML 580

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G+ P  V  S +++GL       +A   +   +      N++I+N +++G  +     
Sbjct: 581 RNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVD 640

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  KLF  +   + + ++ T  ++I  +   G    A+ LF  +   GL PDV TY  I 
Sbjct: 641 EAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIA 700

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
             L +   +     +F  ME++G  P+  + N L+  L+   ++  A     +L ++   
Sbjct: 701 ENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFS 760

Query: 591 PDIITYNTII 600
            +  T   +I
Sbjct: 761 LEASTTAMLI 770



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 206/405 (50%), Gaps = 9/405 (2%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P++ T + ++   C  G++ +  + F ++L  G + N +  + L+   C   +L +A  
Sbjct: 91  TPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMD 150

Query: 270 -LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD---RGLKLDVVVFSSVM 325
            L   M E+   PD++ Y+ L+ G     R +E  ELL    D   R    +VV +++V+
Sbjct: 151 ILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVI 210

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           + +   G V +A   +  M++ G  PNV++Y+ +I GLC+   +  A G+F Q++ + ++
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA----LRFF 441
           P   TY+ LI G+   GK ++   + + M   GLKPD      L+N L  +      RFF
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330

Query: 442 FQS-VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F S +R  + PN+ I+  L+ G       ++   L  LM    + PD     ++    A 
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           +  +  A+ +F +M ++GL+PDV+ + A+I  L K   +   +  F  M   GVAP+I +
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           +N L+  L      + A + + ++ ++G+ PD++ +NTI+C  C+
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 200/371 (53%), Gaps = 9/371 (2%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P++ T+S LI  FC+  +LE  F  + L+++     + I+ + L+ GL  A RL+E  ++
Sbjct: 92  PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151

Query: 306 LLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG---GFLPNVISYSILIK 361
           L+  +   G   DVV +++++  +        A++    M +       PNV+SY+ +I 
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G   +G++ +A  LF +++ R ++P+++TY+++IDG CK+  +     ++  MI +G+KP
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 422 DAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D    + LI+G +      + +R   +     L P+ + + +L++  C   R  +    F
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    IKP+V  + +LI G A++G+LS    L   M++ GL+PD   ++ I     K 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             I   +H+F  M++ G++PD+  +  L++ L K   +D A+  F Q+ + G+ P+I  +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 597 NTIICGYCSLN 607
           N+++ G C+++
Sbjct: 452 NSLVYGLCTVD 462



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 202/405 (49%), Gaps = 27/405 (6%)

Query: 226 NGQIG--NASSLFDVLLLVGPKPNVVTFSTLINAFCK-------EAKLEKAFQLYNLMME 276
           +G +G  +A  LFD LL      +++ F+ L+ A  +         + E    L+N M+ 
Sbjct: 25  SGSLGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIR 84

Query: 277 ---MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
              + + PDL  YSILI    + GRL+ G       L  G +++ +V + ++    G+ D
Sbjct: 85  ECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK---GLCD 141

Query: 334 VGRAVQTYD----RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI---RRLEP 386
             R  +  D    RM   G  P+V+SY+ L+KG C + R  EA  L   +     R   P
Sbjct: 142 AKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           ++++Y+++I+GF   G++   ++L+  M+ RG++P+ V  + +I+GL     +  A   F
Sbjct: 202 NVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            Q +   + P+   +N L+ G   + +  + V++   M  + +KPD  T+  L+  + + 
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A   F  M+++G+ P+V  Y  +IHG      +S    +  LM  NG++PD  I+
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           N++     K+  +D A+ +F ++  +GL PD++ +  +I   C L
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKL 426



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 167/324 (51%), Gaps = 22/324 (6%)

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ-QGRL 369
           +R L+L+ V+ S      +G+ D   A++ +D +L      ++I+++ L+  + +  GR 
Sbjct: 10  NRCLELERVIGSRARSGSLGLDD---ALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRR 66

Query: 370 VEAC------GLFGQVLIR---RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
                      LF +++     ++ P L TYS LI  FC+ G+L  GF+ +  ++K G +
Sbjct: 67  SSTTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWR 126

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            + +V + L+ GL     + +A+    + +  +   P++  +NTL+ G C  KRA + ++
Sbjct: 127 VNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALE 186

Query: 475 LFMLMG---MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
           L  +M      +  P+V+++  +I G  ++G +  A  LF +M+ RG+ P+V+TY+ +I 
Sbjct: 187 LLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL K + +     +F+ M   GV PD   YN L++  +        +++  +++  GL+P
Sbjct: 247 GLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306

Query: 592 DIITYNTIICGYCSLNSCLIDGYF 615
           D  TY +++   C+   C    +F
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFF 330



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 167/395 (42%), Gaps = 30/395 (7%)

Query: 79  MRDVASHVFDKM--------VIQFGK--------------TYNFFRLFRDSLGDFGCDYS 116
           M D A H+F+KM        V+ FG                  F ++  + +      ++
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMR 174
            L+     + K +++ E +  M + GI   PD+V    ++  L     V +  +L   M 
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGI--RPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G    G I+ A      ++  G  P+  T N +L   C  G+I 
Sbjct: 511 RVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRID 570

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  +F  +L  G  P VVT+ST+++      +  +A +LY  M+      ++ IY+I++
Sbjct: 571 DAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIIL 630

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K   + E  +L  +   +  +L++  F+ ++ A    G    A+  +  + + G +
Sbjct: 631 NGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +Y ++ + L ++G L E   LF  +      P+    ++L+      G +    + 
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAY 750

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
              + ++    +A   ++LI+ L  D       S+
Sbjct: 751 LSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 267/544 (49%), Gaps = 37/544 (6%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           + G+     +LF D   D  C     Y+ LI      G+  E++ +F  M + G   +  
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
               L+  L   N + +  K+   M  KG       Y  L++G  ++G+I++AF +   +
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
                 PN  T N+++  LC   ++  A +L + +L     P+++T+++LI+  CK   L
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E A++L +LM E  LVPD   YS+ ID L K GR++E   L  +   +G+K + V+++++
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D Y  +G +  A    +RMLN   LPN  +Y++LI+GLC++ ++ EA  L  ++L   +
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALR 439
           +P+++TY+ LI    K G       ++++M+  G +PD     A + +    G++ +   
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDD 635

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRL---KRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
              +     ++P+L  +  L+DG  RL    RA D +K  +  G    KP +   ++LI+
Sbjct: 636 VIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG---CKPSLYIVSILIK 692

Query: 497 GIASQGSLSS------------------AILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
            ++ +  +                    A+ LF +M++ G T DV  Y A+I G  + + 
Sbjct: 693 NLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQER 752

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +   M+  G++P   IYN LL+   K      A++L   + + GL P + +Y  
Sbjct: 753 LEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKL 812

Query: 599 IICG 602
           ++CG
Sbjct: 813 LVCG 816



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 211/432 (48%), Gaps = 5/432 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+ G  R   ++NA+ +   + Q+G   N V+   ++  LC  G+I  A  LF  +
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P V T++ LI A     +  +A  L+N M E    P++  Y++LIDGL K  ++
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKM 350

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  ++L    ++GL   VV +++++D Y   G +  A +  D M +    PN  +Y+ L
Sbjct: 351 DEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNEL 410

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC++ ++ +A  L  ++L R+L PSL+TY+SLI G CK   L   + L   M + GL
Sbjct: 411 ICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGL 470

Query: 420 KPDAVVCSLLINGLMGDA----LRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVK 474
            PD    S+ I+ L  +         F SV+   +  N  I+  L+DG C++ +      
Sbjct: 471 VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYS 530

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M      P+  T+ VLI G+  +  +  A  L  +ML  G+ P V+TY+ +I  + 
Sbjct: 531 LLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEML 590

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K       L +F  M   G  PD+  Y   L+    +  L+    +  ++ + G+ PD++
Sbjct: 591 KDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLV 650

Query: 595 TYNTIICGYCSL 606
           TY  +I GY  L
Sbjct: 651 TYTVLIDGYARL 662



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 233/519 (44%), Gaps = 27/519 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI      G+I+E++++FA M++     +      L+  L  S    +   L   M+
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++GL ++  ++ A  M  ++ ++G +P++VT N ++   C  G I 
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  + D++      PN  T++ LI   CK+ K+ KA  L N M+E  L P LI Y+ LI
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K   L+    LL    + GL  D   +S  +D     G V  A   +D +   G  
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            N + Y+ LI G C+ G++  A  L  ++L     P+  TY+ LI+G CK  K+++  SL
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M+  G+KP  V  ++LI  ++ D     AL+ F   V +   P++  +   +     
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS 626

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                +   +   M    I PD++T+TVLI G A  G    A      M+  G  P +  
Sbjct: 627 QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYI 686

Query: 526 YSAIIHGLFKGKNI------------------SVGLHMFKLMERNGVAPDIAIYNVLLNM 567
            S +I  L     +                   + L +F+ M  +G   D++IY  L+  
Sbjct: 687 VSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAG 746

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             ++  L+ A  L   + +RG+ P    YN+++   C L
Sbjct: 747 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKL 785



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 211/425 (49%), Gaps = 5/425 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++  L +  +I+    ++ +++     PNI T N ++   C  G +  A      ++
Sbjct: 162 YNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIV 221

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+  T+++LI   C+   ++ A++++ +M +     + + Y+ LI GL +AGR+ 
Sbjct: 222 QAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRIN 281

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  +L     +      V  ++ ++ A  G G    A+  ++ M   G  PNV +Y++LI
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC++ ++ EA  +  ++  + L PS++TY++LIDG+CK G + D F + D M      
Sbjct: 342 DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG 401

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+    + LI GL     +  A+    + +   L P+L  +N+L+ G C++       +L
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
             LM    + PD  T++V I  +  +G +  A  LF  +  +G+  + + Y+A+I G  K
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              I V   + + M  +   P+   YNVL+  L KE  +  A  L  ++   G++P ++T
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581

Query: 596 YNTII 600
           Y  +I
Sbjct: 582 YTILI 586



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 206/433 (47%), Gaps = 7/433 (1%)

Query: 180 VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           +Y F  ++NG  + G +  A     +++Q G  P+  T   ++   C N  + NA  +F 
Sbjct: 194 IYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFL 253

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
           ++   G + N V+++ LI+  C+  ++ +A +L+  M E +  P +  Y++LI  L  +G
Sbjct: 254 IMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           R  E   L     ++G + +V  ++ ++D       +  A +    M   G +P+V++Y+
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G C++G + +A  +   +      P+  TY+ LI G CK  K+    +L + M++R
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            L P  +  + LI+G      +  A R         L+P+ + ++  +D  C+  R  + 
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             LF  +    +K + + +T LI G    G +  A  L  +ML     P+  TY+ +I G
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K K +     +   M   GV P +  Y +L+  ++K+   D ALK+F  +   G +PD
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613

Query: 593 IITYNTIICGYCS 605
           + TY   +  Y S
Sbjct: 614 VCTYTAFLHAYFS 626



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 234/515 (45%), Gaps = 27/515 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y + G ID++ EI   M       +      L+  L     V +   L   M 
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431

Query: 175 GK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  L++G  +   +E+A+ +   + + G VP+  T +  +  LC  G++ 
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +LFD +   G K N V ++ LI+ +CK  K++ A+ L   M+    +P+   Y++LI
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K  ++KE + L+   L  G+K  VV ++ ++   +  G    A++ ++ M++ G+ 
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +Y+  +     QG L E   +  ++    + P L+TY+ LIDG+ + G     F  
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----------------------ALRFFFQSVRM 447
              M+  G KP   + S+LI  L  +                       AL+ F + V  
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEH 731

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
               ++ I+  L+ G C+ +R  +   L   M    + P    +  L+      G  + A
Sbjct: 732 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA 791

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           + L   M++ GL P + +Y  ++ GL+   +      +F  +   G   D   + VL++ 
Sbjct: 792 VRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 851

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L+K   +D   +L   + ++G +P+ +TY+ +I G
Sbjct: 852 LLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 189/367 (51%), Gaps = 5/367 (1%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           KP +  ++T++ +  K   +++   +Y  ++   + P++  ++ +++G  K G + E   
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
                +  GL  D   ++S++  +     V  A + +  M   G   N +SY+ LI GLC
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + GR+ EA  LF  +      P++ TY+ LI     SG+  +  +L++ M ++G +P+  
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             ++LI+GL     M +A +   +     LIP++  +N L+DG C+     D  ++  LM
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              +  P+  T+  LI G+  +  +  A+ L  +ML+R L+P +ITY+++IHG  K  ++
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                +  LM  NG+ PD   Y+V ++ L KE  ++ A  LF  +  +G++ + + Y  +
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515

Query: 600 ICGYCSL 606
           I GYC +
Sbjct: 516 IDGYCKV 522



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 140/272 (51%), Gaps = 5/272 (1%)

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           Y  +LN    PN+ +++ ++ G C+ G +VEA     +++   L P   TY+SLI G C+
Sbjct: 182 YLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCR 241

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
           +  + + + ++  M ++G + + V  + LI+GL     + +AL+ F         P +  
Sbjct: 242 NKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRT 301

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +  L+       R  + + LF  M     +P+V T+TVLI G+  +  +  A  +  +M 
Sbjct: 302 YTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS 361

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           ++GL P V+TY+A+I G  K   I     +  LME N   P+   YN L+  L K+  + 
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH 421

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            A+ L  ++ +R L P +ITYN++I G C +N
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 153/354 (43%), Gaps = 22/354 (6%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           R+  D+       Y+ LIE   +  K+ E+  + A M  MG+  +      L+  ++   
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593

Query: 162 SVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           +     K+   M   G+    C Y   ++    +G++E    +  ++ + G +P++VT  
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL------------- 264
            ++      G    A      ++  G KP++   S LI     E ++             
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713

Query: 265 -----EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
                E A +L+  M+E     D+ IY  LI G  +  RL+E   L+    +RG+     
Sbjct: 714 NTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 773

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           +++S++D    +G    AV+  D M+  G LP + SY +L+ GL  +G   +A  +F  +
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGL 833

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           L        + +  LIDG  K   + +   L D M ++G +P+ +  SLLI GL
Sbjct: 834 LSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 218/422 (51%), Gaps = 24/422 (5%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNA---------------SSLFDVLLLVGPKPN 247
           ++ + GF P++VT N +L  LC+  +I  A                +LFD ++ +G  P 
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V+TF+TLIN  C E ++ +A  L N M+   L  D++ Y  +++G+ K G  K    LL 
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
              +  +K DVV++S+++D     G    A   +  ML  G  PNV +Y+ +I G C  G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           R  +A  L   ++ R + P +LT+++LI    K GKL +   L D M+ R + PD V  +
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405

Query: 428 LLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            +I G        DA   F     +   P++  FNT++D  CR KR  + ++L   +   
Sbjct: 406 SMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            +  +  T+  LI G     +L++A  LF +M+  G+ PD IT + +++G  + + +   
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L +F++++ + +  D   YN++++ + K   +D A  LF  L   G+EPD+ TYN +I G
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581

Query: 603 YC 604
           +C
Sbjct: 582 FC 583



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 144/601 (23%), Positives = 278/601 (46%), Gaps = 53/601 (8%)

Query: 51  AIQFFKW---THNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDS 107
           AI FF +   +    ++ +  ++I V ++ +  DVA  ++ KM I+           R  
Sbjct: 90  AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-----------RIP 138

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQ 165
           L  +   ++ LI+ +    K+  S+  F  ++ +G    PD+V    L+  L   + + +
Sbjct: 139 LNIYS--FNILIKCFCDCHKLSFSLSTFGKLTKLG--FQPDVVTFNTLLHGLCLEDRISE 194

Query: 166 YYKLCRAMRGKGF-------------------CVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
              L   M   GF                     +  L+NGL  +G +  A  +  +++ 
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G   ++VT   I+  +C  G   +A +L   +     KP+VV +S +I+  CK+     
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  L++ M+E  + P++  Y+ +IDG    GR  +   LL   ++R +  DV+ F++++ 
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A V  G +  A +  D ML+    P+ ++Y+ +I G C+  R  +A  +F  +      P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SP 430

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
            ++T++++ID +C++ ++ +G  L   + +RGL  +    + LI+G      +  A   F
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + +   + P+    N L+ G C  ++  + ++LF ++ M  I  D + + ++I G+   
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
             +  A  LF  +   G+ PDV TY+ +I G      IS    +F  M+ NG  PD + Y
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT---YNTIICGYCSLNSCLIDGYFKSQ 618
           N L+   +K   +D +++L  ++   G   D  T      IIC     +  +I+ Y + +
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVS--DEEIIENYLRPK 668

Query: 619 I 619
           I
Sbjct: 669 I 669


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 218/422 (51%), Gaps = 24/422 (5%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNA---------------SSLFDVLLLVGPKPN 247
           ++ + GF P++VT N +L  LC+  +I  A                +LFD ++ +G  P 
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V+TF+TLIN  C E ++ +A  L N M+   L  D++ Y  +++G+ K G  K    LL 
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
              +  +K DVV++S+++D     G    A   +  ML  G  PNV +Y+ +I G C  G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           R  +A  L   ++ R + P +LT+++LI    K GKL +   L D M+ R + PD V  +
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405

Query: 428 LLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            +I G        DA   F     +   P++  FNT++D  CR KR  + ++L   +   
Sbjct: 406 SMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            +  +  T+  LI G     +L++A  LF +M+  G+ PD IT + +++G  + + +   
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L +F++++ + +  D   YN++++ + K   +D A  LF  L   G+EPD+ TYN +I G
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581

Query: 603 YC 604
           +C
Sbjct: 582 FC 583



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 199/400 (49%), Gaps = 29/400 (7%)

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           V CNK++       +   A SL+  + +     N+ +F+ LI  FC   KL  +   +  
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           + ++   PD++ ++ L+ GL    R+ E   L    ++ G                    
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL------------------ 208

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
              AV  +D+M+  G  P VI+++ LI GLC +GR++EA  L  +++ + L   ++TY +
Sbjct: 209 --EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMT 448
           +++G CK G  +   +L   M +  +KPD V+ S +I+     G   DA   F + +   
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + PN+F +N ++DG C   R +D  +L   M    I PDV+T   LI     +G L  A 
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  +ML R + PD +TY+++I+G  K        HMF LM     +PD+  +N ++++ 
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            +   +D  ++L  +++ RGL  +  TYNT+I G+C +++
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/574 (24%), Positives = 267/574 (46%), Gaps = 48/574 (8%)

Query: 51  AIQFFKW---THNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDS 107
           AI FF +   +    ++ +  ++I V ++ +  DVA  ++ KM I+           R  
Sbjct: 90  AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-----------RIP 138

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQ 165
           L  +   ++ LI+ +    K+  S+  F  ++ +G    PD+V    L+  L   + + +
Sbjct: 139 LNIYS--FNILIKCFCDCHKLSFSLSTFGKLTKLG--FQPDVVTFNTLLHGLCLEDRISE 194

Query: 166 YYKLCRAMRGKGF-------------------CVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
              L   M   GF                     +  L+NGL  +G +  A  +  +++ 
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G   ++VT   I+  +C  G   +A +L   +     KP+VV +S +I+  CK+     
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  L++ M+E  + P++  Y+ +IDG    GR  +   LL   ++R +  DV+ F++++ 
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A V  G +  A +  D ML+    P+ ++Y+ +I G C+  R  +A  +F  +      P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SP 430

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
            ++T++++ID +C++ ++ +G  L   + +RGL  +    + LI+G      +  A   F
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + +   + P+    N L+ G C  ++  + ++LF ++ M  I  D + + ++I G+   
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
             +  A  LF  +   G+ PDV TY+ +I G      IS    +F  M+ NG  PD + Y
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           N L+   +K   +D +++L  ++   G   D  T
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 210/471 (44%), Gaps = 65/471 (13%)

Query: 127 KIDESVEIFAYMSDMG-------------IYLSPDLV--QRLMSCLVDSNSVGQYYKLCR 171
           +I E++ +F YM + G             I L+P ++    L++ L     V +   L  
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250

Query: 172 AMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M GKG  +    Y  ++NG+ + G  ++A ++  ++ +    P++V  + I+ RLC +G
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
              +A  LF  +L  G  PNV T++ +I+ FC   +   A +L   M+E ++ PD++ ++
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI    K G+L E  +L    L R +  D V ++S++  +        A   +D M + 
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS- 429

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              P+V++++ +I   C+  R+ E   L  ++  R L  +  TY++LI GFC+   L   
Sbjct: 430 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI------------ 450
             L+  MI  G+ PD + C++L+ G      + +AL  F + ++M+ I            
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIH 545

Query: 451 ------------------------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                                   P++  +N ++ G C     +D   LF  M     +P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
           D  T+  LIRG    G +  +I L  +M   G + D  T   +   +  G+
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGR 656



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 16/328 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ +   G+  ++  +   M +  I  +PD++    L+S  V    + +  KLC  
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREI--NPDVLTFNALISASVKEGKLFEAEKLCDE 391

Query: 173 MRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +        Y  ++ G  +    ++A HM   +      P++VT N I+   C   +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKR 447

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +     L   +   G   N  T++TLI+ FC+   L  A  L+  M+   + PD I  +I
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ G  +  +L+E  EL        + LD V ++ ++        V  A   +  +   G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V +Y+++I G C +  + +A  LF ++     EP   TY++LI G  K+G++    
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627

Query: 409 SLYDNMIKRGLKPDA----VVCSLLING 432
            L   M   G   DA    +V  L+ +G
Sbjct: 628 ELISEMRSNGFSGDAFTIKMVADLITDG 655


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 252/508 (49%), Gaps = 19/508 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++ +    G +D +V +F  +   G  L+PD +    LMS  V +N +     L   
Sbjct: 162 YNIMLRSLCVRGDLDRAVTLFDSLRCRG--LAPDRITYSTLMSGFVKNNRLDNALYLLDE 219

Query: 173 M-----RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQ-RGFVPNIVTCNKILKRLCIN 226
           M     +    C Y  L+ G  R G  E A  +  Q+++  G  PN+ T N +L  LC  
Sbjct: 220 MPSYEVQPDAVC-YNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKL 278

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G    A  +++ ++    +P+++T+ T+I+  C+   ++ A ++Y+ M++  LVPD++IY
Sbjct: 279 GMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIY 338

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + L+ G   AGR+ E  +   +    G++ +V  ++ ++      G V +A   ++ +  
Sbjct: 339 NSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEK 397

Query: 347 GGFL-PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
              L P+++++S +I GLC++G   ++  +  +      E    +YSS+I G CK G+L 
Sbjct: 398 DDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLD 457

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
           D   LY+ +     KP++ + + LING        DA+R + Q       P    +NTL+
Sbjct: 458 DAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLI 517

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
            G C+ ++  +  +    M       DV T+  LIRG+     +  A+ L+ Q+L +GL 
Sbjct: 518 HGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQ 577

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLM-ERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            DV+ ++ +IHGL     +     +   M E+N   P++  YN L++   +    D A  
Sbjct: 578 TDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAAS 637

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L+  + + GL PDII+YNT I G CS N
Sbjct: 638 LWMAILENGLVPDIISYNTRIKGLCSCN 665



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 210/422 (49%), Gaps = 47/422 (11%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           R   PN+ T N +L+ LC+ G +  A +LFD L   G  P+ +T+STL++ F K  +L+ 
Sbjct: 153 RRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDN 212

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  L + M   ++ PD + Y+ L+ G F+ G  +                          
Sbjct: 213 ALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFE-------------------------- 246

Query: 327 AYVGIGDVGRAVQTYDRML-NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
                    +A++ +++++ + G  PN+ +Y++++ GLC+ G   EA  ++ +++    +
Sbjct: 247 ---------KAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQ 297

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P ++TY ++I G C+S  +     +Y  MIK GL PD V+ + L+ G      +G+A +F
Sbjct: 298 PDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKF 357

Query: 441 FFQSVRMTLIPNLFIFNTLMDGC---CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           +  S+ ++ I N+  +N ++ G      + +ATD  +L  L    ++ PD++T + +I G
Sbjct: 358 W-DSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWEL--LEKDDSLSPDMVTFSTMIHG 414

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +  +G  + ++ +  +    G   D  +YS++I GL K   +   + +++ +  +   P+
Sbjct: 415 LCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPN 474

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
             IYN L+N   +      A++++ Q+ +    P  ITYNT+I G C     L    F  
Sbjct: 475 SHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTR 534

Query: 618 QI 619
           ++
Sbjct: 535 EM 536



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 199/398 (50%), Gaps = 8/398 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++GL R   +++A  ++ ++I+ G VP++V  N +LK  C  G++G A   +D +
Sbjct: 302 TYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSM 361

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD-LVPDLIIYSILIDGLFKAGR 298
            + G + NV +++ ++        ++KA  L+ L+ + D L PD++ +S +I GL + G 
Sbjct: 362 SVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGF 420

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
             +  ++L  A   G +LD   +SS++      G +  AV+ Y+++    F PN   Y+ 
Sbjct: 421 ANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNA 480

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI G CQ  +  +A  ++ Q+      P+ +TY++LI G CK+ K  +       M+++G
Sbjct: 481 LINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKG 540

Query: 419 LKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
              D      LI GL  D     AL  + Q +   L  ++ + N L+ G C   +  +  
Sbjct: 541 CMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEAS 600

Query: 474 KLFMLMGMYN-IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           +L   M   N   P+V+T+  L+ G    G    A  L+  +L+ GL PD+I+Y+  I G
Sbjct: 601 QLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKG 660

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           L        G+ +   M  +G+ P    +N+L+  +IK
Sbjct: 661 LCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIK 698



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 192/433 (44%), Gaps = 76/433 (17%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y  +I    R   +D +  +++ M   G  L PD+V    L+     +  VG+ +K   +
Sbjct: 303 YGTMIHGLCRSTDVDSAARVYSEMIKTG--LVPDVVIYNSLLKGFCHAGRVGEAWKFWDS 360

Query: 173 MRGKGF---CVYEFLMNGLLRKGVIENAFHMHRQVIQR--GFVPNIVT--------CNK- 218
           M   G      Y  ++ GL   G+++ A  +  +++++     P++VT        C K 
Sbjct: 361 MSVSGIRNVTSYNIMLKGLFDGGMVDKATDLW-ELLEKDDSLSPDMVTFSTMIHGLCEKG 419

Query: 219 --------------------------ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
                                     ++  LC +G++ +A  L++ + +   KPN   ++
Sbjct: 420 FANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYN 479

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
            LIN FC+ +K   A ++Y+ M E D  P  I Y+ LI GL KA +  E +      L++
Sbjct: 480 ALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEK 539

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G  LDV  + S++        +  A+  ++++L+ G   +V+ ++ILI GLC  G++ EA
Sbjct: 540 GCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEA 599

Query: 373 CGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
             L  ++  +    P+++TY++L+DGF ++G      SL+  +++ G             
Sbjct: 600 SQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENG------------- 646

Query: 432 GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
                            L+P++  +NT + G C   R  + V+L   M    I P  IT 
Sbjct: 647 -----------------LVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITW 689

Query: 492 TVLIRGIASQGSL 504
            +L+R +   G +
Sbjct: 690 NILVRAVIKYGPI 702



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 161/342 (47%), Gaps = 15/342 (4%)

Query: 77  SDMRDVASH------VFDKMVIQFGKTYNFFRLFR--DSLGDFGCDYSFLIENYVRIGKI 128
           S +R+V S+      +FD  ++   K  + + L    DSL      +S +I      G  
Sbjct: 364 SGIRNVTSYNIMLKGLFDGGMVD--KATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFA 421

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFL 184
           ++S++I       G  L       ++S L     +    KL   +    F     +Y  L
Sbjct: 422 NKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNAL 481

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           +NG  +     +A  ++ Q+ +    P  +T N ++  LC   +   AS     +L  G 
Sbjct: 482 INGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGC 541

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
             +V T+ +LI   C++ K++ A  L+N +++  L  D+++++ILI GL  AG++ E ++
Sbjct: 542 MLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQ 601

Query: 305 LLLTALDRG-LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           LL    ++     +VV ++++MD +   G   +A   +  +L  G +P++ISY+  IKGL
Sbjct: 602 LLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGL 661

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           C   R  E   L  ++L   + P+ +T++ L+    K G ++
Sbjct: 662 CSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 500 SQGSLSSAILLFFQMLKR--GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG---- 553
           S+  +  A L  F+ L    G  P V +++A++    + +  S     F  +        
Sbjct: 95  SRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRR 154

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +AP++  YN++L  L    +LD A+ LF  L  RGL PD ITY+T++ G+   N
Sbjct: 155 IAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN 208


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 265/548 (48%), Gaps = 25/548 (4%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSF--LIENYVRIGK 127
           +I VL ++D  + A  +F+ M               D      C Y++  +I  Y   GK
Sbjct: 311 MIGVLCKADRLNEAVELFEHM---------------DQNKQVPCAYAYNTMIMGYGMAGK 355

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG---FCVYEFL 184
            +++  +       G   S      ++SCL     V +  K    M+         Y  +
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIM 415

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++ L + G +E A  +   +   G  PN++T N ++ RLC   ++ +A S+F+ L     
Sbjct: 416 IDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC 475

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +P+ VT+ +LI    +  ++++A++LY  M++ + +P+ ++Y+ LI   FK GR ++G++
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHK 535

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +    L  G   D+++ ++ MD     G++ +    +  + N GF+P+  SY+ILI GL 
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + G   EA  LF  +  +        Y+++IDGFCKSGK+   + L + M  +G +P  V
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
               +I+GL     + +A   F ++    +  N+ I+++L+DG  ++ R  +   +   +
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               + P+V T   L+  +     +S A++ F  M     TP+ ITYS +IHGL K +  
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +     ++ M++ G  P++  Y  +++ L K  N+  A  LF +  ++G   D   YN I
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAI 835

Query: 600 ICGYCSLN 607
           I G  + N
Sbjct: 836 IEGLSNAN 843



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 247/495 (49%), Gaps = 23/495 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD------LVQRL 153
           F  + +D++ +    Y+ +I+   + GK++ ++ +   M D G++  P+      +V RL
Sbjct: 398 FEEMKKDAIPNLST-YNIMIDMLCKAGKLETALVVRDAMKDAGLF--PNVITVNIMVDRL 454

Query: 154 MSC--LVDSNSV--GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
                L D+ S+  G  +K CR         Y  L+ GL R G ++ A+ ++ Q++    
Sbjct: 455 CKAQRLDDACSIFEGLDHKTCRP----DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           +PN V    +++     G+  +   +++ +L +G  P+++  +T ++   K  ++EK   
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L+  +  +  +PD   Y+ILI GL KAG   E  EL  T  ++G  LD   +++V+D + 
Sbjct: 571 LFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G V +A Q  + M   G  P V++Y  +I GL +  RL EA  LF +   + +E +++
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
            YSSLIDGF K G++ + + + + ++++GL P+    + L++ L     + +AL  F   
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
             +   PN   ++ L+ G C++++       +  M     KP+V T+T +I G+A  G++
Sbjct: 751 KDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNI 810

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  LF +  ++G   D   Y+AII GL      S    +F+     G +       VL
Sbjct: 811 VEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVL 870

Query: 565 LNMLIK-ECNLDAAL 578
           L+ L K EC   AA+
Sbjct: 871 LDSLHKAECIEQAAI 885



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 251/502 (50%), Gaps = 12/502 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM- 173
           Y+  I+ + + GK+D + + F  M   G+ L       ++  L  ++ + +  +L   M 
Sbjct: 273 YNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMD 332

Query: 174 -RGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
              +  C Y +  ++ G    G  E+A+ +  +  ++G +P++V+ N IL  L   GQ+ 
Sbjct: 333 QNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVD 392

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   F+ +      PN+ T++ +I+  CK  KLE A  + + M +  L P++I  +I++
Sbjct: 393 EALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMV 451

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L KA RL +   +      +  + D V + S+++     G V  A + Y++ML+   +
Sbjct: 452 DRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI 511

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN + Y+ LI+   + GR  +   ++ ++L     P LL  ++ +D   K+G++  G +L
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  +   G  PDA   ++LI+GL+      +A   F+       + +   +NT++DG C+
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +     +L   M     +P V+T+  +I G+A    L  A +LF +   +G+  +V+ 
Sbjct: 632 SGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVI 691

Query: 526 YSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           YS++I G  K G+     L M +LM++ G+ P++  +N LL+ L+K   +  AL  F  +
Sbjct: 692 YSSLIDGFGKVGRIDEAYLIMEELMQK-GLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
            D    P+ ITY+ +I G C +
Sbjct: 751 KDLKCTPNYITYSILIHGLCKI 772



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/585 (22%), Positives = 255/585 (43%), Gaps = 32/585 (5%)

Query: 37  AILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGK 96
            +L  L   NN   A+ +F+W        +  +  + LL              MV+   +
Sbjct: 102 GVLRRLKDVNN---AVNYFRWAERLTDRAHCREAYNSLL--------------MVMARTR 144

Query: 97  TYNFFR--LFRDSLGDFGCDYSFLIE---NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
            +N     L   S+  FG   +  IE   ++++  K+ E+      M  +    +     
Sbjct: 145 KFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYT 204

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR----KGVIENAFHMHRQVIQR 207
            L+  L  S        L + M+  G+ V   L   L+R    +G ++ A  +  ++   
Sbjct: 205 NLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSN 264

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
              P++V  N  +      G++  A   F  +   G   + VT++++I   CK  +L +A
Sbjct: 265 SLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEA 324

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +L+  M +   VP    Y+ +I G   AG+ ++   LL     +G    VV ++ ++  
Sbjct: 325 VELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSC 384

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G V  A++ ++ M     +PN+ +Y+I+I  LC+ G+L  A  +   +    L P+
Sbjct: 385 LGRKGQVDEALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++T + ++D  CK+ +L D  S+++ +  +  +PDAV    LI GL     + +A + + 
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           Q +    IPN  ++ +L+    +  R  D  K++  M      PD++     +  +   G
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +     LF ++   G  PD  +Y+ +IHGL K         +F  M+  G   D   YN
Sbjct: 564 EIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            +++   K   ++ A +L  ++  +G EP ++TY ++I G   ++
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 111/508 (21%), Positives = 220/508 (43%), Gaps = 45/508 (8%)

Query: 138 MSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENA 197
           ++++ +  +P+LV  ++  L D N+   Y++    +  +  C   +  N LL        
Sbjct: 88  LAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAY--NSLLMVMARTRK 145

Query: 198 FHMHRQVIQR----GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           F+   Q+++     GF P+  TC +I+     + ++  A +    +  +  +P    ++ 
Sbjct: 146 FNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTN 205

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI A       +    L+  M E+    ++ +++ LI    + GR+     LL       
Sbjct: 206 LIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNS 265

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L+ DVV+++  +D +   G V  A + +  M   G + + ++Y+ +I  LC+  RL EA 
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAV 325

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
            LF  +   +  P    Y+++I G+  +GK  D +SL +   ++G  P  V  + +++  
Sbjct: 326 ELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385

Query: 432 ---GLMGDALRFFFQSVR----------------------------------MTLIPNLF 454
              G + +AL+ F +  +                                    L PN+ 
Sbjct: 386 GRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVI 445

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
             N ++D  C+ +R  D   +F  +     +PD +T+  LI G+   G +  A  L+ QM
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           L     P+ + Y+++I   FK      G  ++  M R G +PD+ + N  ++ + K   +
Sbjct: 506 LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEI 565

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICG 602
           +    LF ++ + G  PD  +Y  +I G
Sbjct: 566 EKGRALFQEIKNLGFIPDARSYTILIHG 593


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 260/536 (48%), Gaps = 47/536 (8%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC------LVDSNSVGQYYKLCR 171
           L++ YVR+G  DE+++        G       V  +MSC      L++   +     + R
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRG------FVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 172 AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            ++  G       Y   +  L RKG  E A  + R++ + G  PN VTC+  ++ LC + 
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHK 276

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +          L       +   ++ +I  FC E KL++A  ++  M+   + PD  IY 
Sbjct: 277 RSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYG 336

Query: 288 ILIDGLFKAGRLKEG----NELLLTAL------------DRGLKLDVVVFSSVMDAYVGI 331
            LI    KAG L +     N+++   +            D G+ LD V+++ V+DA   +
Sbjct: 337 ALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKL 396

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G V  AV+  + M       +V+ Y+ LI G C QG+LV+A  +F ++  R +EP ++TY
Sbjct: 397 GKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTY 456

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-MGDALR---FFFQSVRM 447
           + L+ GF ++G  ++   L D +  +GLKP++   + +I GL M   ++    F  ++  
Sbjct: 457 NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED 516

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLF--------MLMGMYNIKPDVITHTVLIRGIA 499
             + N   ++ ++DG C+        +LF        + M   +++P+ I +  LI    
Sbjct: 517 KCLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFC 573

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G +  A L+F  +++RG+TPDVITY+ +I+G  +   +     +F  M+  G+ PD+ 
Sbjct: 574 RDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVI 633

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
            Y V+L+   K  NL  A+ L+ ++  RGL+PDI+TY  ++ G C+  S   D  +
Sbjct: 634 TYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQW 689



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 179/385 (46%), Gaps = 34/385 (8%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEI----------------FAYMSDMGI 143
           F  +  + +   G  Y  LI  Y + G + ++V +                F    D GI
Sbjct: 320 FIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGI 379

Query: 144 YLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFH 199
           +L   L   ++  L     V +  +L   M+G+   +    Y  L+ G   +G + +A +
Sbjct: 380 FLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKN 439

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           M  ++ +RG  P+IVT N ++     NG    A  L D +   G KPN  T + +I   C
Sbjct: 440 MFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLC 499

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG----LK 315
              K+++A    N + +  L      YS ++DG  KA   ++  EL      +G    L 
Sbjct: 500 MAGKVKEAEAFLNTLEDKCLEN----YSAMVDGYCKANFTRKAYELFSRLSKQGILRMLA 555

Query: 316 LDV----VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           LDV    +++  ++ A+   GD+ RA   +D ++  G  P+VI+Y+++I G C+   L E
Sbjct: 556 LDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLRE 615

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  +F  +  R ++P ++TY+ ++DG  K+  L+D  +LYD MI RGL+PD V  + L+ 
Sbjct: 616 ARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLP 675

Query: 432 GLMGDALRFFFQSVRMTLIPNLFIF 456
           G      R F    +    P LFI 
Sbjct: 676 GKCNFGSRHF--DNQWLEEPKLFIL 698



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 100/210 (47%), Gaps = 29/210 (13%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           +YS +++ Y +     ++ E+F+ +S  GI        R+++  V+ N +         M
Sbjct: 521 NYSAMVDGYCKANFTRKAYELFSRLSKQGIL-------RMLALDVEPNQI---------M 564

Query: 174 RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
            GK       L+    R G ++ A  +   +++RG  P+++T   ++   C    +  A 
Sbjct: 565 YGK-------LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREAR 617

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            +F+ +   G KP+V+T++ +++   K   L+ A  LY+ M+   L PD++ Y+ L+ G 
Sbjct: 618 DIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGK 677

Query: 294 FKAG------RLKEGNELLLTALDRGLKLD 317
              G      +  E  +L + A  RG++L+
Sbjct: 678 CNFGSRHFDNQWLEEPKLFILAQPRGVRLE 707


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 265/548 (48%), Gaps = 25/548 (4%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSF--LIENYVRIGK 127
           +I VL ++D  + A  +F+ M               D      C Y++  +I  Y   GK
Sbjct: 311 MIGVLCKADRLNEAVELFEHM---------------DQNKQVPCAYAYNTMIMGYGMAGK 355

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG---FCVYEFL 184
            +++  +       G   S      ++SCL     V +  K    M+         Y  +
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIM 415

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++ L + G +E A  +   +   G  PN++T N ++ RLC   ++ +A S+F+ L     
Sbjct: 416 IDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC 475

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +P+ VT+ +LI    +  ++++A++LY  M++ + +P+ ++Y+ LI   FK GR ++G++
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHK 535

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +    L  G   D+++ ++ MD     G++ +    +  + N GF+P+  SY+ILI GL 
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + G   EA  LF  +  +        Y+++IDGFCKSGK+   + L + M  +G +P  V
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
               +I+GL     + +A   F ++    +  N+ I+++L+DG  ++ R  +   +   +
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               + P+V T   L+  +     +S A++ F  M     TP+ ITYS +IHGL K +  
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +     ++ M++ G  P++  Y  +++ L K  N+  A  LF +  ++G   D   YN I
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAI 835

Query: 600 ICGYCSLN 607
           I G  + N
Sbjct: 836 IEGLSNAN 843



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 247/495 (49%), Gaps = 23/495 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD------LVQRL 153
           F  + +D++ +    Y+ +I+   + GK++ ++ +   M D G++  P+      +V RL
Sbjct: 398 FEEMKKDAIPNLST-YNIMIDMLCKAGKLETALVVRDAMKDAGLF--PNVITVNIMVDRL 454

Query: 154 MSC--LVDSNSV--GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
                L D+ S+  G  +K CR         Y  L+ GL R G ++ A+ ++ Q++    
Sbjct: 455 CKAQRLDDACSIFEGLDHKTCRP----DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           +PN V    +++     G+  +   +++ +L +G  P+++  +T ++   K  ++EK   
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L+  +  +  +PD   Y+ILI GL KAG   E  EL  T  ++G  LD   +++V+D + 
Sbjct: 571 LFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G V +A Q  + M   G  P V++Y  +I GL +  RL EA  LF +   + +E +++
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
            YSSLIDGF K G++ + + + + ++++GL P+    + L++ L     + +AL  F   
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
             +   PN   ++ L+ G C++++       +  M     KP+V T+T +I G+A  G++
Sbjct: 751 KDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNI 810

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  LF +  ++G   D   Y+AII GL      S    +F+     G +       VL
Sbjct: 811 VEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVL 870

Query: 565 LNMLIK-ECNLDAAL 578
           L+ L K EC   AA+
Sbjct: 871 LDSLHKAECIEQAAI 885



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 251/502 (50%), Gaps = 12/502 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM- 173
           Y+  I+ + + GK+D + + F  M   G+ L       ++  L  ++ + +  +L   M 
Sbjct: 273 YNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMD 332

Query: 174 -RGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
              +  C Y +  ++ G    G  E+A+ +  +  ++G +P++V+ N IL  L   GQ+ 
Sbjct: 333 QNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVD 392

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   F+ +      PN+ T++ +I+  CK  KLE A  + + M +  L P++I  +I++
Sbjct: 393 EALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMV 451

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L KA RL +   +      +  + D V + S+++     G V  A + Y++ML+   +
Sbjct: 452 DRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI 511

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN + Y+ LI+   + GR  +   ++ ++L     P LL  ++ +D   K+G++  G +L
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  +   G  PDA   ++LI+GL+      +A   F+       + +   +NT++DG C+
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +     +L   M     +P V+T+  +I G+A    L  A +LF +   +G+  +V+ 
Sbjct: 632 SGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVI 691

Query: 526 YSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           YS++I G  K G+     L M +LM++ G+ P++  +N LL+ L+K   +  AL  F  +
Sbjct: 692 YSSLIDGFGKVGRIDEAYLIMEELMQK-GLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
            D    P+ ITY+ +I G C +
Sbjct: 751 KDLKCTPNYITYSILIHGLCKI 772



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/585 (22%), Positives = 255/585 (43%), Gaps = 32/585 (5%)

Query: 37  AILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGK 96
            +L  L   NN   A+ +F+W        +  +  + LL              MV+   +
Sbjct: 102 GVLRRLKDVNN---AVNYFRWAERLTDRAHCREAYNSLL--------------MVMARTR 144

Query: 97  TYNFFR--LFRDSLGDFGCDYSFLIE---NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
            +N     L   S+  FG   +  IE   ++++  K+ E+      M  +    +     
Sbjct: 145 KFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYT 204

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR----KGVIENAFHMHRQVIQR 207
            L+  L  S        L + M+  G+ V   L   L+R    +G ++ A  +  ++   
Sbjct: 205 NLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSN 264

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
              P++V  N  +      G++  A   F  +   G   + VT++++I   CK  +L +A
Sbjct: 265 SLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEA 324

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +L+  M +   VP    Y+ +I G   AG+ ++   LL     +G    VV ++ ++  
Sbjct: 325 VELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSC 384

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G V  A++ ++ M     +PN+ +Y+I+I  LC+ G+L  A  +   +    L P+
Sbjct: 385 LGRKGQVDEALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++T + ++D  CK+ +L D  S+++ +  +  +PDAV    LI GL     + +A + + 
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           Q +    IPN  ++ +L+    +  R  D  K++  M      PD++     +  +   G
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +     LF ++   G  PD  +Y+ +IHGL K         +F  M+  G   D   YN
Sbjct: 564 EIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            +++   K   ++ A +L  ++  +G EP ++TY ++I G   ++
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/508 (21%), Positives = 220/508 (43%), Gaps = 45/508 (8%)

Query: 138 MSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENA 197
           ++++ +  +P+LV  ++  L D N+   Y++    +  +  C   +  N LL        
Sbjct: 88  LAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAY--NSLLMVMARTRK 145

Query: 198 FHMHRQVIQR----GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           F+   Q+++     GF P+  TC +I+     + ++  A +    +  +  +P    ++ 
Sbjct: 146 FNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTN 205

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI A       +    L+  M E+    ++ +++ LI    + GR+     LL       
Sbjct: 206 LIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNS 265

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L+ DVV+++  +D +   G V  A + +  M   G + + ++Y+ +I  LC+  RL EA 
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAV 325

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
            LF  +   +  P    Y+++I G+  +GK  D +SL +   ++G  P  V  + +++  
Sbjct: 326 ELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385

Query: 432 ---GLMGDALRFFFQSVR----------------------------------MTLIPNLF 454
              G + +AL+ F +  +                                    L PN+ 
Sbjct: 386 GRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVI 445

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
             N ++D  C+ +R  D   +F  +     +PD +T+  LI G+   G +  A  L+ QM
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           L     P+ + Y+++I   FK      G  ++  M R G +PD+ + N  ++ + K   +
Sbjct: 506 LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEI 565

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICG 602
           +    LF ++ + G  PD  +Y  +I G
Sbjct: 566 EKGRALFQEIKNLGFIPDARSYTILIHG 593


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/535 (26%), Positives = 253/535 (47%), Gaps = 48/535 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  +V +   ++++  +     +G+ L   L   L+ CLV+ N +     L   M+
Sbjct: 144 YATIIRIFVELSMFEDALLTYTEAKKVGVEL--QLCNFLLKCLVERNQIIYARSLFDDMK 201

Query: 175 GKG----FCVYEFLMNGLLR--KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
             G       Y  LM+      +  +  AF +  ++  +G  PN  T    L  L    Q
Sbjct: 202 SSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQ 261

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A +   +L   G   N   F+ +I  FC+E ++++A ++++ M +  LVPD   YSI
Sbjct: 262 VASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSI 321

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+DGL K G +  G +LL+     G+   +V +SS++      G V  A + + R+   G
Sbjct: 322 LVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQG 381

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F  + I YSI++ G CQ   +   C L+  ++     P    Y+SLI  FC+   L D  
Sbjct: 382 FKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDAL 441

Query: 409 SLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +++ M+  G+ P+ V C++L++G     ++ +A  F  +  +  ++PNL ++  +++G 
Sbjct: 442 GVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGL 501

Query: 464 CRLKRA----------------TDTV-------------------KLFMLMGMYNIKPDV 488
           C++ ++                 DTV                   +LF  M     KP+V
Sbjct: 502 CKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNV 561

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
            T+T LI G+     L   + LF  M+  GLTPD I Y+++I    K  N+   L +F+ 
Sbjct: 562 FTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRG 621

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           M + G++ D  +Y  L+    K   +D A  L  ++T++GL P ++TY  +I GY
Sbjct: 622 MGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGY 676



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 215/467 (46%), Gaps = 44/467 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  ++   +   + E+A   + +  + G    +  CN +LK L    QI  A SLFD +
Sbjct: 143 VYATIIRIFVELSMFEDALLTYTEAKKVGV--ELQLCNFLLKCLVERNQIIYARSLFDDM 200

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKL--EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
              GP PNV ++S L++A+    +L   +AF+L + M    + P+   Y   + GL +  
Sbjct: 201 KSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTR 260

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           ++      L     RG   +   F++V+  +   G V  A++ +D M  GG +P+  SYS
Sbjct: 261 QVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYS 320

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           IL+ GLC+QG ++    L  ++    + P+L++YSSL+ G C++GK+   F L+  + ++
Sbjct: 321 ILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQ 380

Query: 418 GLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G K D +V S+++NG             +   V    +P+ + + +L+   CR +  TD 
Sbjct: 381 GFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDA 440

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL----------------------- 509
           + +F LM    + P+V+T T+L+ G   +  +  A L                       
Sbjct: 441 LGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIING 500

Query: 510 ------------LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
                       +F  M+KRG  PD + YS II    K   +     +F  M   G  P+
Sbjct: 501 LCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPN 560

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  Y  L+N L  +  L   + LF  +   GL PD I Y ++I  YC
Sbjct: 561 VFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYC 607



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/525 (24%), Positives = 235/525 (44%), Gaps = 50/525 (9%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSV--GQYYKLCR 171
           +FL++  V   +I  +  +F  M   G   SP++     LMS     + +   + ++L  
Sbjct: 178 NFLLKCLVERNQIIYARSLFDDMKSSGP--SPNVYSYSVLMSAYTHGDRLYLAEAFELLS 235

Query: 172 AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M  KG       Y   + GL R   + +A++  + + QRG   N    N +++  C  G
Sbjct: 236 EMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREG 295

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           Q+  A  +FD +   G  P+  ++S L++  CK+  +   + L   M    + P L+ YS
Sbjct: 296 QVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYS 355

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+ GL +AG+++   EL     ++G K D +V+S +++      ++      ++ M++ 
Sbjct: 356 SLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHH 415

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF--------- 398
            F+P+  +Y+ LI   C+   L +A G+F  +L   + P+++T + L+DGF         
Sbjct: 416 NFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEA 475

Query: 399 --------------------------CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
                                     CK  K    + ++ +MIKRG  PD VV S++I+ 
Sbjct: 476 FLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDS 535

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                 + +A R F + +     PN+F + +L++G C   R  + V LF  M    + PD
Sbjct: 536 FVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPD 595

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            I +T LI     + ++ +A+ +F  M K GL+ D   Y+ +I G  K   +     + +
Sbjct: 596 RILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLME 655

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
            M   G+ P +  Y  L+    K  +   A   +  +   G+ PD
Sbjct: 656 EMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPD 700



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/536 (24%), Positives = 232/536 (43%), Gaps = 89/536 (16%)

Query: 43  IKTNNPTPAIQFFK-----WTHNCVSSPNIAQLIHVLLQSDMRDVASHVFD--------K 89
           +K++ P+P +  +      +TH       +A+   +L + +M+ V  +            
Sbjct: 200 MKSSGPSPNVYSYSVLMSAYTHG--DRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLS 257

Query: 90  MVIQFGKTYNFFRLF--RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
              Q    +NF ++   R +  +  C ++ +I+ + R G++ E++E+F  M   G+    
Sbjct: 258 RTRQVASAWNFLQMLCQRGNPCNTYC-FNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDT 316

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQ 203
                L+  L     V   Y L   M   G       Y  L++GL R G +E AF + R+
Sbjct: 317 HSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRR 376

Query: 204 VIQRGF-----------------------------------VPNIVTCNKILKRLCINGQ 228
           + ++GF                                   VP+      ++   C +  
Sbjct: 377 LEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRN 436

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  +F+++L  G  PNVVT + L++ F KE  +++AF   + + +  +VP+L +Y +
Sbjct: 437 LTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRV 496

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+GL K  +      +    + RG   D VV+S ++D++V    +  A + + +ML+ G
Sbjct: 497 IINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEG 556

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV +Y+ LI GLC   RL E   LF  ++   L P  + Y+SLI  +CK   ++   
Sbjct: 557 TKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAAL 616

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC-CRLK 467
            ++  M K GL  DA + + LI G         F  V              MDG  C ++
Sbjct: 617 EIFRGMGKLGLSADAFLYTCLIGG---------FSKV------------LAMDGAQCLME 655

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
             T+            + P V+T+T LI G    G    A + +  ML+ G+TPD 
Sbjct: 656 EMTNK----------GLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDA 701



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 194/418 (46%), Gaps = 18/418 (4%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD-----VLLLVGPKPNVVTFSTLINAF 258
           ++ R F+P  +   +   R  ++    +   LF+     V  L G    +  ++T+I  F
Sbjct: 92  LLMRSFLPQRIREIRCFIRSIVDYCGSSGRELFELAPMLVSSLGGSMTLLQVYATIIRIF 151

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
            + +  E A   Y    ++ +  +L + + L+  L +  ++     L       G   +V
Sbjct: 152 VELSMFEDALLTYTEAKKVGV--ELQLCNFLLKCLVERNQIIYARSLFDDMKSSGPSPNV 209

Query: 319 VVFSSVMDAYVGIGD---VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
             +S +M AY   GD   +  A +    M   G  PN  +Y   + GL  + R V +   
Sbjct: 210 YSYSVLMSAYTH-GDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGL-SRTRQVASAWN 267

Query: 376 FGQVLIRRLEP-SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           F Q+L +R  P +   ++++I GFC+ G++++   ++D M K GL PD    S+L++GL 
Sbjct: 268 FLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLC 327

Query: 434 -MGDALR---FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
             GD L       +  R  + P L  +++L+ G CR  +     +LF  +     K D I
Sbjct: 328 KQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHI 387

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
            +++++ G     ++     L+  M+     PD   Y+++I+   + +N++  L +F+LM
Sbjct: 388 VYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELM 447

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             +GV+P++    +L++   KE  +D A     ++   G+ P++  Y  II G C +N
Sbjct: 448 LDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVN 505



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 48/325 (14%)

Query: 32  FNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFD 88
           +N  + I A   +  N T A+  F+   +   SPN+     L+    +  M D A  +F 
Sbjct: 422 YNYTSLIYA-FCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEA-FLFL 479

Query: 89  KMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
             V QFG   N             C Y  +I    ++ K D    IFA M   G    PD
Sbjct: 480 HKVRQFGIVPNL------------CMYRVIINGLCKVNKSDHVWGIFADMIKRGYV--PD 525

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
            V                             VY  +++  ++   +  AF +  +++  G
Sbjct: 526 TV-----------------------------VYSIIIDSFVKALKLPEAFRLFHKMLDEG 556

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN+ T   ++  LC + ++    +LF  ++  G  P+ + +++LI  +CK + ++ A 
Sbjct: 557 TKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAAL 616

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           +++  M ++ L  D  +Y+ LI G  K   +     L+    ++GL   VV +++++  Y
Sbjct: 617 EIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGY 676

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNV 353
             IGD  +A  TY+ ML  G  P+ 
Sbjct: 677 FKIGDERKANMTYNSMLQAGITPDA 701


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 227/426 (53%), Gaps = 6/426 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++ L +KG I  +  +  +V++RG   N  TCN  ++ LC  G++  A +L + +    
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVT++TL+   CK++K+++A Q    MM    +PD   Y+ +IDG  K   L+E  
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           ELL  A+ +G   D V + S+++     GDV RA++ ++        P+++ Y+ L+KGL
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+QG ++ A  +  +++     P + TY+ +I+G CK G + D   + ++ I +G  PD 
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              + +I+G      +  AL+   +     + P+   +N++++G C+  +A +  + F  
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M +   +P+ IT+ +LI        L  A  +  +M + GL PD I+++ +IHG  +  +
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGD 479

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F+ ++  G +     +N+L+     + N+  A K+FG++  +G +PD+ TY  
Sbjct: 480 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRV 539

Query: 599 IICGYC 604
           ++ G C
Sbjct: 540 LVDGSC 545



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 257/528 (48%), Gaps = 24/528 (4%)

Query: 111 FGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL---VQRLMS-CLVDSN 161
           FGC      Y+ +++  V     D++ +++  M   G+  +PD      R+ S C+    
Sbjct: 4   FGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGV--APDARTHTVRIKSFCITGRP 61

Query: 162 SVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            V    +L R++  +G  V    Y  ++ GL   G   +A H+  ++++R   P++ T N
Sbjct: 62  HVA--LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFN 119

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            +L  LC  G I  + +L   +L  G   N  T +  I   C+  +LE+A  L    M+ 
Sbjct: 120 NVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVE-SMDA 178

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + PD++ Y+ L+ GL K  +++E  + L   +++G   D   +++++D Y     +  A
Sbjct: 179 YIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEA 238

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            +     +  GF+P+ ++Y  LI GLC +G +  A  LF +   + L+P L+ Y+SL+ G
Sbjct: 239 TELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKG 298

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
            C+ G +     + + M++ G  PD    +++INGL     + DA      ++    +P+
Sbjct: 299 LCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPD 358

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +F FNT++DG C+  +    ++L   M MY I PD IT+  ++ G+   G        F 
Sbjct: 359 VFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFE 418

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M+ +G  P+ ITY+ +I    K   +     +   M ++G+ PD   +N L++   +  
Sbjct: 419 EMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNG 478

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCS-LNSCLIDGYFKSQI 619
           +LD A  LF +L ++G      T+N +I  Y S LN  + +  F   I
Sbjct: 479 DLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 526



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 246/520 (47%), Gaps = 16/520 (3%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G+ +   RL R SL + GCD     Y  ++      G   ++  +F  M    ++     
Sbjct: 59  GRPHVALRLLR-SLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVAT 117

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMN----GLLRKGVIENAFHMHRQVI 205
              ++  L     + +   L   +  +G  V +F  N    GL   G +E A  +  + +
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVAL-VESM 176

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
                P++VT N +++ LC + ++  A+     ++  G  P+  T++T+I+ +CK   L+
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A +L    +    VPD + Y  LI+GL   G ++   EL   A  + LK D+VV++S++
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLV 296

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
                 G +  A+Q  + M+  G  P++ +Y+I+I GLC+ G + +A  +    +++   
Sbjct: 297 KGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRF--- 440
           P + T++++IDG+CK  KL     L + M   G+ PDA+  + ++NGL   G A      
Sbjct: 357 PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNET 416

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F + +     PN   +N L++  C++ +  +   + + M    + PD I+   LI G   
Sbjct: 417 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCR 476

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G L  A LLF ++ ++G +    T++ +I       N+ +   +F  M   G  PD+  
Sbjct: 477 NGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT 536

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           Y VL++   K  N+D A     ++  +G  P + T+  ++
Sbjct: 537 YRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVL 576



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 231/493 (46%), Gaps = 39/493 (7%)

Query: 107 SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           S+  F C+    I      G+++E+V   A +  M  Y++PD+V                
Sbjct: 147 SVNKFTCN--IWIRGLCEGGRLEEAV---ALVESMDAYIAPDVV---------------- 185

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
                         Y  LM GL +   ++ A    R+++ +G +P+  T N I+   C  
Sbjct: 186 -------------TYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKR 232

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
             +  A+ L    +  G  P+ VT+ +LIN  C E  +E+A +L+N     DL PDL++Y
Sbjct: 233 DMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVY 292

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + L+ GL + G +    +++   ++ G   D+  ++ V++    +G++  A    +  + 
Sbjct: 293 NSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIV 352

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G+LP+V +++ +I G C++ +L  A  L  ++ +  + P  +TY+S+++G CK+GK ++
Sbjct: 353 KGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
               ++ MI +G +P+A+  ++LI        + +A     +  +  L+P+   FNTL+ 
Sbjct: 413 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIH 472

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G CR         LF  +          T  +LI   +S+ ++  A  +F +M+ +G  P
Sbjct: 473 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D+ TY  ++ G  K  N+         M   G  P +A +  +LN L     +  A+ + 
Sbjct: 533 DLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAII 592

Query: 582 GQLTDRGLEPDII 594
             +   G+ P+++
Sbjct: 593 HIMVRMGVVPEVV 605



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 188/372 (50%), Gaps = 12/372 (3%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L G  P    ++ +++A    A  ++A ++Y  M+   + PD   +++ I      GR  
Sbjct: 3   LFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPH 62

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               LL +  +RG  +  + + +V+      G    A   +D ML     P+V +++ ++
Sbjct: 63  VALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVL 122

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LCQ+G ++E+  L  +VL R +  +  T +  I G C+ G+L +  +L ++M    + 
Sbjct: 123 HALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIA 181

Query: 421 PDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDT 472
           PD V  + L+ GL  D     A ++  + +    IP+ F +NT++DG C+   L+ AT+ 
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           +K  +  G     PD +T+  LI G+ ++G +  A+ LF +   + L PD++ Y++++ G
Sbjct: 242 LKDAIFKGFV---PDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKG 298

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L +   I   L +   M  +G  PDI  YN+++N L K  N+  A  +      +G  PD
Sbjct: 299 LCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPD 358

Query: 593 IITYNTIICGYC 604
           + T+NT+I GYC
Sbjct: 359 VFTFNTMIDGYC 370


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 231/435 (53%), Gaps = 7/435 (1%)

Query: 177 GFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           GF +Y F  L+  L +  ++ +A +++ Q+   G  P+++T N ++  LC  G++  A  
Sbjct: 159 GFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVL 218

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F+ +      P+  T+++LI   C+  KL+KAF++++ M++    P+ + YS LI+GL 
Sbjct: 219 VFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLC 278

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             GR+ E  ++L    ++G++  V  ++  + +   IG V  A+     M   G  P+V 
Sbjct: 279 NEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQ 338

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ +I GL + G++  A G++ ++L   L P+ +TY++LI+  C  G+      ++D M
Sbjct: 339 TYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWM 398

Query: 415 IKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
              G   +A   + +I GL G      A+  F + ++    P +  +NTL+    +    
Sbjct: 399 EGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYL 458

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  +   +M   N +PD  T+  LI G    G L SA   F++MLK G++P+  TY+A+
Sbjct: 459 NNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAM 518

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  K   I V L +F+ ME NG +  I  YN +++ L K      A K   ++T++GL
Sbjct: 519 IDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGL 578

Query: 590 EPDIITYNTIICGYC 604
           +P+ ITY ++I G C
Sbjct: 579 QPNTITYTSLINGLC 593



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 240/531 (45%), Gaps = 26/531 (4%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
           D A  VFD+MV             +D        YS LI      G+I E++++   M++
Sbjct: 249 DKAFEVFDRMV-------------KDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTE 295

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIEN 196
            GI  +       +S L D   V     L R+M  KG       Y  +++GL R G +E 
Sbjct: 296 KGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMEL 355

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  M+ ++++ G VPN VT N ++  LC  G+ G A  +FD +   G   N  T++ +I 
Sbjct: 356 AIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIK 415

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
                  +EKA  ++N M++    P ++ Y+ LI    K G L      L    +   + 
Sbjct: 416 GLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEP 475

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D   +  ++  +   G +  A   +  ML  G  PN  +Y+ +I G C++G++  A  LF
Sbjct: 476 DERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLF 535

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
            ++       S+ TY+++I G  K  +  +       M ++GL+P+ +  + LINGL  +
Sbjct: 536 ERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKN 595

Query: 437 -----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
                A + F +  +   +PN   + +L+ G C+  +  D  +     G    +P + T+
Sbjct: 596 TATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV-DAAERLTENG---CEPTIDTY 651

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           + L+ G+  +G  + A  L   M ++GL+P +  Y +++    K   +   L +F LM  
Sbjct: 652 STLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAV 711

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            G  P + IY VL+  L      + AL +F  L  +    D+I +  ++ G
Sbjct: 712 KGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDG 762



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 199/430 (46%), Gaps = 5/430 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  ++N L +KG ++ A  +  ++ Q    P+  T   ++   C N ++  A  +FD +
Sbjct: 199 TFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRM 258

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PN VT+STLIN  C E ++ +A  +   M E  + P +  Y++ I  L   GR+
Sbjct: 259 VKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRV 318

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   L+ +   +G    V  +++++      G +  A+  Y +ML  G +PN ++Y+ L
Sbjct: 319 DDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNAL 378

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC +GR   A  +F  +       +  TY+ +I G      +     +++ M+K G 
Sbjct: 379 INELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGP 438

Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P  V  + LI      G + +A RF +        P+   +  L+ G C+  +      
Sbjct: 439 SPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATS 498

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
            F  M    I P+  T+T +I G   +G +  A+ LF +M + G +  + TY+AII GL 
Sbjct: 499 FFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLS 558

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           KG   S        M   G+ P+   Y  L+N L K    + A K+F ++  +   P+  
Sbjct: 559 KGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAH 618

Query: 595 TYNTIICGYC 604
           TY ++I G C
Sbjct: 619 TYTSLIYGLC 628



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 127/510 (24%), Positives = 235/510 (46%), Gaps = 40/510 (7%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F ++F+  L      Y+ LI  + R  K+D++ E+F  M   G                +
Sbjct: 220 FNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDG---------------CN 264

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            NSV                 Y  L+NGL  +G I  A  M  ++ ++G  P + T    
Sbjct: 265 PNSV----------------TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVP 308

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  LC  G++ +A +L   +   G  P+V T++ +I+   +  K+E A  +Y+ M++  L
Sbjct: 309 ISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGL 368

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           VP+ + Y+ LI+ L   GR     ++       G   +   ++ ++    G+ D+ +A+ 
Sbjct: 369 VPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMV 428

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            +++ML  G  P V++Y+ LI    ++G L  A      +     EP   TY  LI GFC
Sbjct: 429 VFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFC 488

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLF 454
           K GKL    S +  M+K G+ P+    + +I+G   +     AL  F +        ++ 
Sbjct: 489 KGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIE 548

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +N ++ G  +  R ++  K    M    ++P+ IT+T LI G+    + + A  +F +M
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM 608

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            K+   P+  TY+++I+GL +   +       + +  NG  P I  Y+ L++ L +E   
Sbjct: 609 EKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRS 664

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + A +L   + ++GL P +  Y +++  +C
Sbjct: 665 NEASQLVENMKEKGLSPSMEIYCSLLVAHC 694



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/447 (22%), Positives = 192/447 (42%), Gaps = 48/447 (10%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           + ++ ++ L      Y+ LI      G+   +++IF +M   G   +     +++  L  
Sbjct: 360 YHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFG 419

Query: 160 SNSVGQ----YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
            + + +    + K+ +         Y  L+   L++G + NA      + +    P+  T
Sbjct: 420 MDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERT 479

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
             +++   C  G++ +A+S F  +L  G  PN  T++ +I+ +CKE K++ A  L+  M 
Sbjct: 480 YCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERME 539

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           E      +  Y+ +I GL K  R  E  +      ++GL+ + + ++S+++         
Sbjct: 540 ENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATN 599

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A + +  M     LPN  +Y+ LI GLCQ+G++  A     ++     EP++ TYS+L+
Sbjct: 600 LAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLV 655

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPD---------------AVVCSLLINGLMG----- 435
            G C+ G+  +   L +NM ++GL P                 V C+L I  LM      
Sbjct: 656 SGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQ 715

Query: 436 --------------------DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
                               +AL  F   ++     +L ++  L+DG  +   +   +K 
Sbjct: 716 PHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKF 775

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQG 502
             LM   N  P + T+ +L R ++  G
Sbjct: 776 LYLMESRNCTPSLHTYIILARELSKVG 802



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 131/310 (42%), Gaps = 43/310 (13%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F+ + +  +      Y+ +I+ Y + GKID ++ +F  M + G   S +    ++S L  
Sbjct: 500 FYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSK 559

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
            N   +  K C  M  +G       Y  L+NGL +      AF +  ++ ++  +PN  T
Sbjct: 560 GNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHT 619

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL----- 270
              ++  LC  G++  A  L +     G +P + T+STL++  C+E +  +A QL     
Sbjct: 620 YTSLIYGLCQEGKVDAAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMK 675

Query: 271 ------------------------------YNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                                         +NLM      P L IY +LI  L    R +
Sbjct: 676 EKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAE 735

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   +  + L +    D++V++ ++D  +  GD    ++    M +    P++ +Y IL 
Sbjct: 736 EALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILA 795

Query: 361 KGLCQQGRLV 370
           + L + G+ +
Sbjct: 796 RELSKVGKSI 805



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 79/154 (51%)

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           L+ FNTL+    +    T    ++  +    +KP ++T   +I  +  +G +  A+L+F 
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           ++ +  L PD  TY+++I G  + + +     +F  M ++G  P+   Y+ L+N L  E 
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +  A+ +  ++T++G+EP + TY   I   C +
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDI 315


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 241/467 (51%), Gaps = 15/467 (3%)

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L+S L       Q + L   MR  G     C    L+N L     +     +   +++R
Sbjct: 101 HLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRR 160

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G++P+IVT   ++K LC+  +I  A+ LF  +  +G  PN +T+ TL+   C+   +  A
Sbjct: 161 GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIA 220

Query: 268 FQLYNLMME------MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            +L+  M+       ++  P +I YSI+ID L K  R  E  +L      +G+   V+ +
Sbjct: 221 LKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISY 280

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +S++  +   G    A + ++ M+N G  PNV+++++LI  LC++G+++EA  L   ++ 
Sbjct: 281 TSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQ 340

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           R + P+LLTY+SLI+GFC  G L     L+ +M  +G +PD +  ++LING      + +
Sbjct: 341 RGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEE 400

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A++ +   +++   P++  +  L+ G  +  +  D  KLF +M +Y I  D+  + + + 
Sbjct: 401 AMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLN 460

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+   G L  A+ LF ++    +  D+  ++ +I GL K   +     +F+ + +  + P
Sbjct: 461 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP 520

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           D+  YN++++   +   +  A  LF ++   G  PD ITY T+I G+
Sbjct: 521 DVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGF 567



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 251/492 (51%), Gaps = 28/492 (5%)

Query: 125 IGKIDESVEIFAYMSDMGIY-LSPD--LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF--- 178
           + KI    ++F   + M +  +SPD   +  L++CL + N VG+   +   +  +G+   
Sbjct: 106 LAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPD 165

Query: 179 -CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG------- 230
              Y  L+ GL  +  I  A  +  ++ + G  PN +T   ++K LC  G I        
Sbjct: 166 IVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQ 225

Query: 231 ---NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
              N SSL+ +      KP V+++S +I+A CK+ + ++A  L+  M    + P +I Y+
Sbjct: 226 EMLNDSSLYGINF----KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYT 281

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI G    G+ +E   L    +++G++ +VV F+ ++D     G V  A    + M+  
Sbjct: 282 SLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR 341

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +PN+++Y+ LI+G C  G L  A  LF  +  +  EP ++ Y+ LI+G+CK+ K+ + 
Sbjct: 342 GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEA 401

Query: 408 FSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIP-NLFIFNTLMD 461
             LY+ M++ G +PD     A++  L   G +GDA + F   +++  IP +L+I+   ++
Sbjct: 402 MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF-GVMKVYGIPGDLYIYGIFLN 460

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+     + ++LF  +  YNIK D+     LI G+   G L +A  LF ++ +  L P
Sbjct: 461 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP 520

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           DV+TY+ +IH   +G  +     +F+ ME+NG  PD   Y  L+    +   L+  ++L 
Sbjct: 521 DVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELL 580

Query: 582 GQLTDRGLEPDI 593
             +  R +  D+
Sbjct: 581 HMMVQRDVSLDV 592



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 271/552 (49%), Gaps = 31/552 (5%)

Query: 28  SDLQFNQANAILANLIKTNN--PTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASH 85
           + + F Q  ++  +  KT N   T A QFF        +P ++   H+L         S 
Sbjct: 55  TPISFQQQLSMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQ 114

Query: 86  VFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           VF          YN  RL    +    C  + L+     + ++ E + + A +   G Y+
Sbjct: 115 VF--------YLYNQMRL--SGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRG-YI 163

Query: 146 SPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFH 199
            PD+V    L+  L   + + +   L   M+  G       Y  LM GL R G I  A  
Sbjct: 164 -PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALK 222

Query: 200 MHRQVIQRG------FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +H++++         F P +++ + I+  LC + +   A  LF+ + + G  P V+++++
Sbjct: 223 LHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTS 282

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI+ FC   K E+A +L+N M+   + P+++ +++LID L K G++ E  +LL   + RG
Sbjct: 283 LIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRG 342

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  +++ ++S+++ +  +GD+  A + +  M + G  P+VI Y++LI G C+  ++ EA 
Sbjct: 343 IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAM 402

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L+  +L     P + TY +L+ G  + GK+ D   L+  M   G+  D  +  + +NGL
Sbjct: 403 KLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGL 462

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                + +A+  F +     +  ++  FN L+DG C+  +     +LF  +    ++PDV
Sbjct: 463 CKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDV 522

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+ ++I      G +  A +LF +M K G TPD ITY+ +I G F+ K +   + +  +
Sbjct: 523 VTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHM 582

Query: 549 MERNGVAPDIAI 560
           M +  V+ D+ I
Sbjct: 583 MVQRDVSLDVNI 594



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 205/382 (53%), Gaps = 13/382 (3%)

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L++ + L G  P+  T + L+N  C   ++ +   +   ++    +PD++ Y+ LI GL 
Sbjct: 118 LYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLC 177

Query: 295 KAGRLKEGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG----- 348
              R+ +   LL T + + G   + + + ++M      G++  A++ +  MLN       
Sbjct: 178 MEHRISKA-ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGI 236

Query: 349 -FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
            F P VISYSI+I  LC+  R  EA  LF ++ ++ + P++++Y+SLI GFC  GK  + 
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEA 296

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L++ M+ +G++P+ V  ++LI+     G + +A       ++  ++PNL  +N+L++G
Sbjct: 297 KRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEG 356

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C +       +LF+ M     +PDVI +TVLI G      +  A+ L+  ML+ G  PD
Sbjct: 357 FCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPD 416

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TY A++ GLF+G  +     +F +M+  G+  D+ IY + LN L K   L  A++LF 
Sbjct: 417 VKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFN 476

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
           +L    ++ DI  +N +I G C
Sbjct: 477 KLKSYNIKLDIECFNCLIDGLC 498



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 64/136 (47%)

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
           AT   + F LM   N  P + + T L+ G+A     S    L+ QM   G++PD  T + 
Sbjct: 77  ATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNI 136

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +++ L     +  GL +   + R G  PDI  Y  L+  L  E  +  A  LF ++   G
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196

Query: 589 LEPDIITYNTIICGYC 604
             P+ ITY T++ G C
Sbjct: 197 CTPNAITYGTLMKGLC 212


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 251/506 (49%), Gaps = 40/506 (7%)

Query: 93  QFGKTYNFFRL-----FRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + GK     RL     FR S  D    YS +I+ Y  +G++ +++++   M   G+  + 
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTPDV-VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNR 328

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQ 203
                ++  L       +  K+ R M  +       VY  L++G  + G +  A     +
Sbjct: 329 YTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDE 388

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           ++ +   P+ +T   +++     G++    +LF  ++  G KP+ VT++TLI+ +CK  +
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +  AF L+N M++M + P+++ Y  LIDGL K G L   NELL     +GL+L+V +++S
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           +++     G++ +A++    M   G  P+ I+Y+ +I   C+ G + +A  L  ++L R 
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQ 443
           L+P+++T++ L++GFC  G L DG  L   M+++G+ PDA+                   
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT------------------ 610

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                       +NTLM   C       T K++  M    + PD  T+ +LI+G     +
Sbjct: 611 ------------YNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L  A  L+ +M+++G  P V +Y+A+I   +K K I     +F+ M  +G+  D  IYN 
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNF 718

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGL 589
            ++M  +E +++  L L  +  ++ L
Sbjct: 719 FVDMCYEEGDVEITLNLCDEAIEKCL 744



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 154/602 (25%), Positives = 282/602 (46%), Gaps = 35/602 (5%)

Query: 24  KTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHV-LLQSDM 79
           K H S+ +++    +L N+   N+    + FF W       P++     +IH+ ++ +D+
Sbjct: 94  KAHESNFRYDHLIWVLMNI--KNDYNLVLAFFDWAR-VRREPSLEARCIIIHIAVVSNDL 150

Query: 80  RDVASHVFD-----KMVIQFGKTYNFFRLFR--DSLGDFGCDYSFLIENYVRIGKIDESV 132
           R     V D     K+ I    T    RL       G     +    +  V IG + E+ 
Sbjct: 151 RLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEAR 210

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMN------ 186
           ++   +   G+ ++ D     +S + + NS G        M  K FC Y    N      
Sbjct: 211 KLLDKLLSYGLVVTVDSCNAFLSRIAN-NSEGI------EMAIKVFCEYGISWNTTSYNI 263

Query: 187 ---GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
               L R G ++ A  +  Q+  R   P++V+ + ++   C  G++  A  L D + + G
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            KPN  T++++I   CK  K  +A ++   MM   ++PD ++Y+ LI G FK G ++  N
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +     L + +  D + +++++  +   G V      +  M++ G  P+ ++Y+ LI   
Sbjct: 384 KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+ G +V A  L  +++   + P+++TY +LIDG CK G+L     L D M K+GL+ + 
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNV 503

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            + + ++NG+     +  A++   +     + P+   + T++D  CRL       KL   
Sbjct: 504 CIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    ++P V+T  VL+ G    G L     L   ML++G+ PD ITY+ ++       +
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           ++    ++K M   GVAPD   YN+L+    K  NL  A  L+ ++ ++G  P + +YN 
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683

Query: 599 II 600
           +I
Sbjct: 684 LI 685



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 219/442 (49%), Gaps = 13/442 (2%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G     ++     L+  G +  A  +  +++  G V  + +CN  L R+  N +      
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE--GIEM 244

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL---VPDLIIYSILID 291
              V    G   N  +++ +I + C+  K+++A   + L+M+MD     PD++ YS +ID
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEA---HRLLMQMDFRSSTPDVVSYSTVID 301

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G    G LK+  +L+     +GLK +   ++S++     IG    A +    M++   +P
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           + + Y+ LI G  + G +  A   F ++L +++ P  +TY++LI GF + GK+ +  +L+
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421

Query: 412 DNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             MI RGLKPD V  + LI+     G M +A     + V+M + PN+  +  L+DG C+ 
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                  +L   M    ++ +V  +  ++ GI   G++  AI L  +M   G+ PD ITY
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I    +  +I     + + M   G+ P +  +NVL+N       L+   +L G + +
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 587 RGLEPDIITYNTIICGYCSLNS 608
           +G+ PD ITYNT++  +C  NS
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNS 623



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 221/434 (50%), Gaps = 11/434 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASSLFDV 238
           V+++ +N  L  GV    F  HR +    +  PN +  +   + L   G +  A  L D 
Sbjct: 157 VHDYFLNSKLEIGVKMTQF-THRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDK 215

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAK-LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
           LL  G    V + +  ++     ++ +E A +++    E  +  +   Y+I+I  L + G
Sbjct: 216 LLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF---CEYGISWNTTSYNIIIYSLCRLG 272

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           ++KE + LL+    R    DVV +S+V+D Y  +G++ +A++  D M   G  PN  +Y+
Sbjct: 273 KVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYN 332

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I  LC+ G+  EA  +  +++ +++ P  + Y++LI GF K G +R     +D M+ +
Sbjct: 333 SIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSK 392

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            + PD +  + LI G      + +    F + +   L P+   + TL+D  C+     + 
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             L   M    + P+++T+  LI G+   G L +A  L  +M K+GL  +V  Y+++++G
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           + K  NI   + + K ME  G+ PD   Y  +++   +  ++D A KL  ++ DRGL+P 
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572

Query: 593 IITYNTIICGYCSL 606
           ++T+N ++ G+C L
Sbjct: 573 VVTFNVLMNGFCML 586


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 230/416 (55%), Gaps = 8/416 (1%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +E    +  ++IQ   +P+IV  +K+L ++  +       SLF  + + G   ++ +++ 
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +IN  C+ ++   A  +   MM+    PD++  S LI+G  +  R+ +  +L+    + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            + DVV++++++D    IG V  AV+ +DRM   G   + ++Y+ L+ GLC  GR  +A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L   +++R + P+++T++++ID F K GK  +   LY+ M +R + PD    + LINGL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                + +A +     V    +P++  +NTL++G C+ KR  +  KLF  M    +  D 
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           IT+  +I+G    G   +A  +F +M  R   P++ TYS +++GL     +   L +F+ 
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M+++ +  DI  YN++++ + K  N++ A  LF  L+ +GL+PD+++Y T+I G+C
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 202/386 (52%), Gaps = 6/386 (1%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G     Y  ++N L R      A  +  ++++ G+ P++VT + ++   C   ++ +A  
Sbjct: 101 GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 160

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   +  +G +P+VV ++T+I+  CK   +  A +L++ M    +  D + Y+ L+ GL 
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            +GR  +   L+   + R +  +V+ F++V+D +V  G    A++ Y+ M      P+V 
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI GLC  GR+ EA  +   ++ +   P ++TY++LI+GFCKS ++ +G  L+  M
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340

Query: 415 IKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            +RGL  D +  + +I G       DA +  F   RM   PN+  ++ L+ G C   R  
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS--RMDSRPNIRTYSILLYGLCMNWRVE 398

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + LF  M    I+ D+ T+ ++I G+   G++  A  LF  +  +GL PDV++Y+ +I
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAP 556
            G  + +       +++ M+ +G+ P
Sbjct: 459 SGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 158/319 (49%), Gaps = 34/319 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+   +IG ++++VE+F  M   G+    D V                        
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGV--RADAV------------------------ 210

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+ GL   G   +A  + R ++ R  VPN++T   ++      G+   A  
Sbjct: 211 -----TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L++ +      P+V T+++LIN  C   ++++A Q+ +LM+    +PD++ Y+ LI+G  
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K+ R+ EG +L      RGL  D + +++++  Y   G    A + + RM +    PN+ 
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIR 382

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +YSIL+ GLC   R+ +A  LF  +    +E  + TY+ +I G CK G + D + L+ ++
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442

Query: 415 IKRGLKPDAVVCSLLINGL 433
             +GLKPD V  + +I+G 
Sbjct: 443 SCKGLKPDVVSYTTMISGF 461



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 60/108 (55%)

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
           S  +L   I LF +M++    P ++ +S ++  + K KN  + + +F  ME  G+  D+ 
Sbjct: 46  SSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLY 105

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            YN+++N L +      AL + G++   G EPD++T +++I G+C  N
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGN 153



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 64/136 (47%)

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + + LF  M      P ++  + ++  IA   +    I LF  M   G+  D+ +Y+ +I
Sbjct: 52  EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           + L +     + L +   M + G  PD+   + L+N   +   +  A+ L  ++ + G  
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171

Query: 591 PDIITYNTIICGYCSL 606
           PD++ YNTII G C +
Sbjct: 172 PDVVIYNTIIDGSCKI 187


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 240/491 (48%), Gaps = 33/491 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL---CR 171
           Y+ LIE   + G + ++ +++  M +  I  +  +V  L+   +   S  +  KL     
Sbjct: 387 YAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAV 446

Query: 172 AMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           A        Y  L++ L ++G +  A  + ++++ +G  P  V+ N ++   C  G +  
Sbjct: 447 ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDM 506

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A+S+F  +L  G KPNV+T+S L++ + K    E AF +++ M++ ++VP    Y+I I+
Sbjct: 507 AASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKIN 566

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL K GR  E  ++L   +++G     + ++S+MD ++  G V  A+  Y  M   G  P
Sbjct: 567 GLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSP 626

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NVI+Y+ LI G C+      A  +  ++  + LE  +  Y +LIDGFCK   +     L+
Sbjct: 627 NVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLF 686

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             ++  GL P++V                              I+N+L+ G   L     
Sbjct: 687 SELLDGGLSPNSV------------------------------IYNSLISGYRNLNNMEA 716

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            + L   M    I  D+ T+T LI G+  +G L  A+ L+ +M  +G+ PD+I Y+ +I+
Sbjct: 717 ALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLIN 776

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL     +     +   MER+ + P++ IYN L+    K  NL  A +L  ++ D+GL P
Sbjct: 777 GLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTP 836

Query: 592 DIITYNTIICG 602
           +  TY+ +I G
Sbjct: 837 NDTTYDILING 847



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 274/558 (49%), Gaps = 78/558 (13%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQ--FGKTYNFFRLFRDSLGDFGCDYS--FLIENYVRI 125
           L+  L+++DM   A  V++KMV++   G  +    + R +L D   + +  F +E   R 
Sbjct: 215 LLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRG 274

Query: 126 GKIDE---SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
            K+D    S+ I A+  ++ + L+  L+                    + MR KG+   E
Sbjct: 275 VKLDAAAYSIVIQAFCKNLDVELACGLL--------------------KDMRDKGWVPSE 314

Query: 183 ----FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
                ++   +++G +  A  +  +++  G   N+V    ++K  C   ++ +A   FD 
Sbjct: 315 GTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDK 374

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   GP PN VT++ LI   CK   + KA+ LY  M   ++ P + I + LI G  K   
Sbjct: 375 MNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVES 434

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            +E ++L     D  +  D+                                 N+ +Y+ 
Sbjct: 435 REEASKLF----DEAVACDIA--------------------------------NIFTYNS 458

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+  LC++G++ EA  L+ ++L + L P+ ++Y+S+I G C+ G L    S++ +M+  G
Sbjct: 459 LLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG 518

Query: 419 LKPDAVVCSLLINGLM--GDALRFFFQSVRM---TLIPNLFIFNTLMDGCCRLKR---AT 470
           LKP+ +  S+L++G    GD    F+   RM    ++P+ F +N  ++G C++ R   A 
Sbjct: 519 LKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQ 578

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D +K F+  G     P  +T+  ++ G   +GS+SSA+  + +M + G++P+VITY+ +I
Sbjct: 579 DMLKKFVEKGFV---PVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLI 635

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +G  K  N  + L M   M   G+  DIA Y  L++   K+ +++ A  LF +L D GL 
Sbjct: 636 NGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLS 695

Query: 591 PDIITYNTIICGYCSLNS 608
           P+ + YN++I GY +LN+
Sbjct: 696 PNSVIYNSLISGYRNLNN 713



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 215/429 (50%), Gaps = 6/429 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+    + G +  A+ ++ Q+  +   P +   N +++          AS LFD  
Sbjct: 386 TYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEA 445

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +      N+ T+++L++  CKE K+ +A  L+  M++  L P  + Y+ +I G  + G L
Sbjct: 446 VACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNL 504

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                +    LD GLK +V+ +S +MD Y   GD   A   +DRM++   +P+  +Y+I 
Sbjct: 505 DMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIK 564

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+ GR  EA  +  + + +   P  LTY+S++DGF K G +    + Y  M + G+
Sbjct: 565 INGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGV 624

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ +  + LING   +     AL+   +     L  ++  +  L+DG C+ +       
Sbjct: 625 SPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASW 684

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  +    + P+ + +  LI G  +  ++ +A+ L  +ML  G++ D+ TY+ +I GL 
Sbjct: 685 LFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLL 744

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   + + L ++  M   G+ PDI IY VL+N L  +  L+ A K+  ++    + P++ 
Sbjct: 745 KEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVP 804

Query: 595 TYNTIICGY 603
            YN +I G+
Sbjct: 805 IYNALIAGH 813



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 218/469 (46%), Gaps = 41/469 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y +L+N  ++   + +A     ++++   VP I   N +L  L  N  I  A  +++ +
Sbjct: 176 IYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKM 235

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +L G   +  T   ++ A  K+   E+A + +       +  D   YSI+I    K   +
Sbjct: 236 VLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDV 295

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +    LL    D+G       F+SV+ A V  G++  A++  D M++ G   NV+  + L
Sbjct: 296 ELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTL 355

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +KG C+Q +LV A   F ++      P+ +TY+ LI+  CK+G +   + LY  M  + +
Sbjct: 356 VKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNI 415

Query: 420 KPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P   + + LI G +      +A + F ++V    I N+F +N+L+   C+  + ++   
Sbjct: 416 CPTVFIVNSLIRGFLKVESREEASKLFDEAVACD-IANIFTYNSLLSWLCKEGKMSEATT 474

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L+  M    + P  +++  +I G   QG+L  A  +F  ML  GL P+VITYS ++ G F
Sbjct: 475 LWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYF 534

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML-------------------------- 568
           K  +     ++F  M    + P    YN+ +N L                          
Sbjct: 535 KNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCL 594

Query: 569 ---------IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
                    IKE ++ +AL  + ++ + G+ P++ITY T+I G+C  N+
Sbjct: 595 TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNN 643



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 195/403 (48%), Gaps = 6/403 (1%)

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           F  +I   N +L       ++ +A   F+ L+     P +   + L+ A  K   + +A 
Sbjct: 170 FDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAR 229

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           ++Y  M+   +  D     I++    K    +E  +  L A  RG+KLD   +S V+ A+
Sbjct: 230 EVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAF 289

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
               DV  A      M + G++P+  +++ +I    +QG +VEA  L  +++   ++ ++
Sbjct: 290 CKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNV 349

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQ 443
           +  ++L+ G+CK  KL      +D M + G  P+ V  ++LI     NG M  A   + Q
Sbjct: 350 VVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQ 409

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                + P +FI N+L+ G  +++   +  KLF      +I  ++ T+  L+  +  +G 
Sbjct: 410 MKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGK 468

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +S A  L+ +ML +GL P  ++Y+++I G  +  N+ +   +F  M   G+ P++  Y++
Sbjct: 469 MSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSI 528

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           L++   K  + + A  +F ++ D  + P   TYN  I G C +
Sbjct: 529 LMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKV 571



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 85/193 (44%), Gaps = 9/193 (4%)

Query: 413 NMIKRGLKPDA-VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           N++ R +  D+  + ++L++  +G   RF F S       ++ I+N L++   +  +  D
Sbjct: 140 NLLNRFISGDSGPMPNILVDHFIGSTKRFDFDS-------DIRIYNYLLNSYIKANKLND 192

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            +  F  +   +I P +     L+  +     +  A  ++ +M+ +G+  D  T   ++ 
Sbjct: 193 AIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMR 252

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
              K  N       F   +  GV  D A Y++++    K  +++ A  L   + D+G  P
Sbjct: 253 ANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVP 312

Query: 592 DIITYNTIICGYC 604
              T+ ++I G C
Sbjct: 313 SEGTFTSVI-GAC 324


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 230/440 (52%), Gaps = 18/440 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASSLFDV 238
            +  +++G  +   ++ A     ++  R FV PN  T N ++  LC   +    S  ++V
Sbjct: 9   TWTIIIDGFCKANQLKQALACFEKM--REFVAPNERTYNVVVNGLC---KARLTSKAYEV 63

Query: 239 LLLV----GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD-LVPDLIIYSILIDGL 293
           L  +       P++VT+ST+IN FCK+ ++++A ++   M+  D + PD++ Y+ ++DGL
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML-NGGFLPN 352
            + G++    E++     +G++ D   FS+++  +     V  A++ Y  +L +  + P+
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V++Y+ LI G C+ G L +A  + G +  R+  P+++TYSSL+ G CK+G L     L+ 
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243

Query: 413 NMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLK 467
            M  +G  P+ V  + LI+GL      DA R     +  T  P +   +N L+DG CRL 
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-LKRGLTPDVITY 526
           R  +  +LF  M   +  PD IT+T L+RG  +   L  A  L   M    G+ PDV+TY
Sbjct: 304 RIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTY 363

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           S ++ G  + K         + M    VAP+   Y+ L++ L K   +D A+++   + +
Sbjct: 364 SIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVN 423

Query: 587 RGLEPDIITYNTIICGYCSL 606
           + +EP + T+N++I   C L
Sbjct: 424 KRVEPSVGTFNSVIGALCRL 443



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 130/537 (24%), Positives = 256/537 (47%), Gaps = 66/537 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLC 170
           ++ +I+ + +  ++ +++  F  M +   +++P+  +R  + +V+    +    + Y++ 
Sbjct: 10  WTIIIDGFCKANQLKQALACFEKMRE---FVAPN--ERTYNVVVNGLCKARLTSKAYEVL 64

Query: 171 RAMR-GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLC 224
           + MR GK        Y  ++NG  ++G ++ A  + R+++ R G  P++VT   ++  LC
Sbjct: 65  KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLC 124

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY-NLMMEMDLVPDL 283
            +G++  A  +   + L G +P+  TFS LI  +C   K+++A +LY  ++      PD+
Sbjct: 125 RDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDV 184

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + Y+ LIDG  K+G L++  ++L     R    +VV +SS++      GD+ +A+  + R
Sbjct: 185 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 244

Query: 344 MLNGGFLPNVISYSILIKGLCQQ-----------------------------------GR 368
           M + G +PNV++Y+ LI GLC                                     GR
Sbjct: 245 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGR 304

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM-IKRGLKPDAVVCS 427
           + EA  LF ++  +   P  +TY+ L+ GFC + +L +   L +NM    G+ PD V  S
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364

Query: 428 LLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +++ G        +A  F  + +   + PN   +++L+DG C+  R    +++   M   
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            ++P V T   +I  +   G +  A  L   M   GL P ++TY+ ++ G  +   + + 
Sbjct: 425 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 484

Query: 543 LHMFKLME--------RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             +F++M            + P+ A ++ L+  L K   +D A+ +  +L  R  EP
Sbjct: 485 YELFEVMRKKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMAVVEELRSRECEP 540



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +P VVT++ +I+ FCK  +L++A   +  M E  + P+   Y+++++GL KA    +  E
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 305 LLLTALD-RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKG 362
           +L    D + +  D+V +S+V++ +   G++ RA +    M+   G  P+V++Y+ ++ G
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI-KRGLKP 421
           LC+ G++  AC +  ++ ++ +EP   T+S+LI G+C + K+ +   LY  ++     KP
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 422 DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           D V                               +  L+DG C+       +K+  +M  
Sbjct: 183 DVVT------------------------------YTALIDGFCKSGNLEKAMKMLGVMEG 212

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
               P+V+T++ L+ G+   G L  A+ LF +M  +G  P+V+TY+ +IHGL     +  
Sbjct: 213 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 272

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
              +   M      PD   YN LL+   +   ++ A +LF ++  +   PD ITY  ++ 
Sbjct: 273 ARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVR 332

Query: 602 GYCS 605
           G+C+
Sbjct: 333 GFCN 336



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 222/499 (44%), Gaps = 45/499 (9%)

Query: 105 RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVG 164
           RD +      Y+ +++   R GK+D + E+   M   G+         L++   ++  V 
Sbjct: 106 RDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVD 165

Query: 165 QYYKLCRAMRGKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
           +  KL + +            Y  L++G  + G +E A  M   +  R  VPN+VT + +
Sbjct: 166 EALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSL 225

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           L  LC  G +  A  LF  +   G  PNVVT++TLI+  C   K++ A  L + M     
Sbjct: 226 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCC 285

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            PD + Y+ L+DG  + GR++E  +L      +    D + ++ ++  +     +  A  
Sbjct: 286 PPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARF 345

Query: 340 TYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             + M    G  P+V++YSI++ G  +  R VEA     +++ R + P+ +TYSSLIDG 
Sbjct: 346 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 405

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNT 458
           CK+G++     +  NM+ + ++                              P++  FN+
Sbjct: 406 CKAGRVDHAMEVLKNMVNKRVE------------------------------PSVGTFNS 435

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM---- 514
           ++   CRL    +  KL + M  + ++P ++T+T L+ G +  G +  A  LF  M    
Sbjct: 436 VIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKA 495

Query: 515 ----LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
                   L P+   +SA+I GL K + I   + + + +      P       +++ L++
Sbjct: 496 KKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 554

Query: 571 ECNLDAALKLFGQLTDRGL 589
               + A KL   ++  GL
Sbjct: 555 AGRTEEAGKLINSISKVGL 573


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 207/400 (51%), Gaps = 44/400 (11%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P++V+++T+IN  CKE +LEKA  L   M      P+   Y IL+DGL K GR++E   L
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L     +GL++DVVV+S+++  +   G + R    +D ML  G  PNV+ YS LI G C+
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G   EA  +   +  R ++P + TY+ +I G CK G+ R    L+D M ++G +P  V 
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM- 479
            ++LINGL     +GDA + F   +       +  +NTL+ G C   +  + +KLF  + 
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 480 --GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-------------------- 517
             G Y ++PDVIT   +I+G+  +G L  A+ ++  M++R                    
Sbjct: 248 EDGNY-VEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306

Query: 518 ---------------GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
                          GL P   TYS +I G  K   ++    +F  M+ +G++P +  YN
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            L+  L KE +L+ A +LF ++ +   EPD I++N +I G
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDG 406



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 253/504 (50%), Gaps = 15/504 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ +I    +  +++++V++   M   G    P+      LM  L     V +  +L   
Sbjct: 13  YNTIINGLCKEKRLEKAVDLLVEME--GSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGE 70

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ KG      VY  L++G   KG ++    +  +++++G  PN+V  + ++   C  G 
Sbjct: 71  MKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGL 130

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A+++   +   G +P+V T++ +I   CK+ +  KA  L++LM E    P  + Y++
Sbjct: 131 WREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNV 190

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+GL K G + +  ++  T L++G +L+VV +++++      G +  A++ +  +L  G
Sbjct: 191 LINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDG 250

Query: 349 --FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               P+VI+++ +I+GLC++GRL +A  ++  ++ R    +L T   LI  + KSG +  
Sbjct: 251 NYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDK 310

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL----MGDALRFFFQSVRMT-LIPNLFIFNTLMD 461
              L+  + K GL P +   S++I+G     M +  +  F  ++++ L P LF +NTLM 
Sbjct: 311 AMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMA 370

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C+        +LF  M   N +PD I+  ++I G    G + SA  L   M + GLTP
Sbjct: 371 SLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTP 430

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D  TYS+ I+ L K   +      F  M  +G+ PD  +Y+ L+        ++  + L 
Sbjct: 431 DAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLL 490

Query: 582 GQLTDRGLEPDIITYNTIICGYCS 605
            Q+ D G+  D+   N+I+   C+
Sbjct: 491 RQMADMGVILDLEITNSILTFLCN 514



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 148/322 (45%), Gaps = 6/322 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI      GK+DE++++F+ + + G Y+ PD++    ++  L     + +  ++   
Sbjct: 223 YNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDT 282

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G          L+   ++ G+I+ A  + ++V + G VP+  T + ++   C    
Sbjct: 283 MIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHM 342

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  LF  + + G  P +  ++TL+ + CKE+ LE+A +L+  M E +  PD I ++I
Sbjct: 343 LNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNI 402

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +IDG  KAG +    ELL      GL  D   +SS ++    +G +  A   +D M+  G
Sbjct: 403 MIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASG 462

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+   Y  LIKG      + E   L  Q+    +   L   +S++   C S +     
Sbjct: 463 ITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVM 522

Query: 409 SLYDNMIKRGLKPDAVVCSLLI 430
            L  N         ++ C  L+
Sbjct: 523 ELLPNFSSESSGGTSISCDKLL 544



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 90/159 (56%)

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           R+ ++P++  +NT+++G C+ KR    V L + M   + +P+  T+ +L+ G+  +G + 
Sbjct: 3   RINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVE 62

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ L  +M ++GL  DV+ YS +I G      +  G  +F  M   G++P++ +Y+ L+
Sbjct: 63  EAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLI 122

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N   K+     A  +   +T+RG++PD+ TY  +I G C
Sbjct: 123 NGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLC 161


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 229/435 (52%), Gaps = 5/435 (1%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G   C +  L+  L +  +++ A  M+ +++  G  P+++T N ++  LC  G++  A  
Sbjct: 164 GYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKL 223

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +      PN  T+++LI   C+   L+ AF +++ M++    P+ + YS LI+GL 
Sbjct: 224 IMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLC 283

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             GRL+E  ++L   + +G++  V  ++  + +    G    AV+   +M   G +PN+ 
Sbjct: 284 SEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +++ LI GL + G+   A GL+ ++L   L P+ +TY++LI+  C  G+    F+++  M
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403

Query: 415 IKRGLKPDAVVCSLLIN--GLMGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           +  G  P     + +I    LMGD   A+  F + ++    PN+  +NTL+ G C+    
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            + ++L  +M    +KPD  T+T LI G +  G L  A  LF+ M++ G++P+ +TY+AI
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G F    +   L +F  M  +G  P    YNV+++   K  ++  A    G++  +GL
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGL 583

Query: 590 EPDIITYNTIICGYC 604
            P++ITY + I G C
Sbjct: 584 LPNVITYTSFIDGLC 598



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 248/515 (48%), Gaps = 13/515 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F R+ +D        YS LI      G+++E++++   M   GI  +       +  L D
Sbjct: 260 FDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCD 319

Query: 160 SNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           +    +  +L   M+ +G CV     +  L++GL R G  E A  ++ +++  G VP  V
Sbjct: 320 AGCSSEAVELLGKMKKRG-CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++ +LC+ G+   A ++F  +L  G  P+  T++ +I  FC    ++KA  +++ M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           ++    P++I Y+ LI G  K G L     LL      GLK D   ++ ++  +   G +
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A   +  M+  G  PN ++Y+ +I G     ++ +A  LF +++     PS  TY+ +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           I GF K+  + +  +    M+K+GL P+ +  +  I+GL      G A + F +  +   
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 450 IPNLFIFNTLMDGCCRLKRATDT--VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            PNL+ +++L+ G C+  RA D     L   +  Y  +P+V T+T L++G+  +G    A
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             L   M K+GL P    Y A++ G  K   +   L++F  M+  G    ++ Y  L+  
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L KE  ++ A  +F  + ++    D + +  ++ G
Sbjct: 739 LCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDG 773



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 212/433 (48%), Gaps = 9/433 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NGL  +G +E A  M  +++Q+G  P + T    L  LC  G    A  L   +
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  PN+ TF+ LI+   ++ K E A  LY+ M+   LVP  + Y+ LI+ L   GR 
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +    +    L  G       ++ ++  +  +GD+ +A+  +D+ML  G  PNVI+Y+ L
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+QG L  A  L   +    L+P   TY+ LI GF + GKL    SL+  M++ G+
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ V  + +I+G      + DAL  F++ V    +P+   +N ++ G  +    ++   
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
               M    + P+VIT+T  I G+   G    A  +F +M KR   P++ TYS++I+GL 
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLC 633

Query: 535 KGKNISVGLHMFKLMER---NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           + +  +    M+ L+ R    G  P++  Y  L+  L  E     A +L   +  +GL+P
Sbjct: 634 Q-EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 592 DIITYNTIICGYC 604
               Y  ++ G C
Sbjct: 693 SEEIYRALLIGEC 705



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 186/362 (51%), Gaps = 5/362 (1%)

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           +F+TL+    K   ++ A  +Y  M+   + P L+ ++ +I+ L K GR++E   ++   
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
                  +   ++S++  +    ++  A   +DRM+  G  PN ++YS LI GLC +GRL
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  +  +++ + +EP++ TY+  +   C +G   +   L   M KRG  P+    + L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 430 INGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I+GL  D     A+  + + +   L+P    +N L++  C   R      +F  M  +  
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            P   T+  +I+     G +  A+++F +MLK G +P+VITY+ +I+G  K  N++  + 
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + ++M+ NG+ PD   Y  L++   +   L+ A  LF  + + G+ P+ +TY  II GY 
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528

Query: 605 SL 606
           +L
Sbjct: 529 NL 530



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/305 (20%), Positives = 122/305 (40%), Gaps = 41/305 (13%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F+ +    +      Y+ +I+ Y  + K+D+++ +F  M + G   S      ++S    
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
           +NS+ +    C  M  +G       Y   ++GL R G    AF +  ++ +R + PN+ T
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 216 CNKILKRLCINGQIGNAS--SLFDVLLLVGPKPNVVTFSTLINAFCKEA----------- 262
            + ++  LC  G+  +A   +L   L   G +PNV T++TL+   C E            
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 263 ------------------------KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
                                   K+E A  ++  M  +     L  Y  LI  L K   
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           ++E   +  T L++    D V ++ ++D  +  G+    ++    M +     N  +Y +
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVM 804

Query: 359 LIKGL 363
           L + L
Sbjct: 805 LAREL 809



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 22/209 (10%)

Query: 419 LKPDAVVCSLLINGLMGDALRFFFQ-SVRMTLIPNLFIFNTLMDGCCR--LKRATDTVKL 475
           LKP  VV  L  +      LRFFF  S R     ++  F ++++   R  L    D V++
Sbjct: 76  LKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRI 135

Query: 476 FMLMG-------------------MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            M+                      Y+    + + T L+  +     +  A  ++ +ML 
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G+ P ++T++ +I+ L K   +     +   + R    P+   Y  L+    +  NLD 
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           A  +F ++   G +P+ +TY+T+I G CS
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCS 284


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 231/450 (51%), Gaps = 15/450 (3%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+  L       Q + L + M   G    F     L+N L     +         +++RG
Sbjct: 97  LLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRG 156

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           ++P++VT   ++K LC+  +I  A+ LF  +  +G  PNVVT+ TLI   C+   +  A 
Sbjct: 157 YIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLAL 216

Query: 269 QLYNLMME------MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +L+  M+       ++  P++  Y+I+ID L K G+ KE   L    +D+G++ DVV FS
Sbjct: 217 KLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFS 276

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++D     G V  A +  + M+  G +P++ +++ LI+G C  G L  A  LF  +  +
Sbjct: 277 ALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSK 336

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
             EP +++Y+ LI G+CK+  + +   LY+ M++ G  PD     +L+ GL     +GDA
Sbjct: 337 GYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDA 396

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            + F       +  NL+I +  +DG C+     + ++LF  +  YN+K D+ +   LI G
Sbjct: 397 KKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDG 456

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +     L +A  LF ++ + GL PDV+TY  +I+G  K   +     +F++ME NG  P+
Sbjct: 457 LCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPN 516

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           +  Y+ LL+   K   L+  +KL  ++  +
Sbjct: 517 LLTYSALLHGFYKNNKLEEVVKLLHKMIQK 546



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 245/465 (52%), Gaps = 18/465 (3%)

Query: 125 IGKIDESVEIFAYMSDMGIY-LSPDL--VQRLMSCLVDSNSVGQYYKLCRAMRGKGF--- 178
           + KI    ++F+    M +  LSP+   +  L++CL + N V +       +  +G+   
Sbjct: 101 LAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPD 160

Query: 179 -CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y  L+ GL  +  I  A  +  ++ + G  PN+VT   ++K LC  G I  A  L  
Sbjct: 161 VVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQ 220

Query: 238 VLL------LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
            +L       +  KPN+ +++ +I+  CK  K ++A +L+N M++  + PD++ +S LID
Sbjct: 221 EMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALID 280

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G + E  + L T + RG+  D+  F+S+++ +  +GD+  A + +  M + G+ P
Sbjct: 281 TLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEP 340

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +VISY++LI G C+   + EA  L+ ++L     P + T+  L+ G   +GK+ D   L+
Sbjct: 341 DVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLF 400

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             +    +  +  +CS+ ++GL     + +A+  F +     +  ++  FN L+DG C+ 
Sbjct: 401 GVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKA 460

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           ++     +LF  +    ++PDV+T+ ++I G    G + +A +LF  M + G TP+++TY
Sbjct: 461 RKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTY 520

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
           SA++HG +K   +   + +   M +  V+   +IY ++ +M+ K+
Sbjct: 521 SALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKD 565



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 211/429 (49%), Gaps = 53/429 (12%)

Query: 224 CINGQIGNASSL--FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
           C  G I +  +L  FD+++      ++++F+ L+ A  K     + F LY  M    L P
Sbjct: 70  CKKGNITSTQALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSP 124

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +    +ILI+ L    R++EG   +   + RG   DVV ++S++        +  A + +
Sbjct: 125 NFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLF 184

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL------IRRLEPSLLTYSSLI 395
            RM   G  PNV++Y  LIKGLC+ G +  A  L  ++L          +P++ +Y+ +I
Sbjct: 185 IRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIII 244

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLI 450
           D  CK GK ++   L++ M+ +G++PD V  S LI+     G++ +A +F    +   ++
Sbjct: 245 DELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIV 304

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P+LF F +L++G C +       +LF+ M     +PDVI++TVLI G     ++  A+ L
Sbjct: 305 PDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKL 364

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP-------------- 556
           + +ML+ G  PD+ T+  ++ GLF    +     +F +++ + V                
Sbjct: 365 YNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCK 424

Query: 557 ---------------------DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
                                DI  +N L++ L K   L+ A +LF +L+  GL+PD++T
Sbjct: 425 NGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVT 484

Query: 596 YNTIICGYC 604
           Y  +I G+C
Sbjct: 485 YCIMINGFC 493



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 148/334 (44%), Gaps = 43/334 (12%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCR 171
            Y+ +I+   +IGK  E+  +F  M D G+   PD+V    L+  L     V +  K   
Sbjct: 239 SYNIIIDELCKIGKWKEAKRLFNEMVDQGV--RPDVVTFSALIDTLCKEGMVIEAKKFLE 296

Query: 172 AM--RG------------KGFCV-------------------------YEFLMNGLLRKG 192
            M  RG            +GFC+                         Y  L+ G  +  
Sbjct: 297 TMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTF 356

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            +E A  ++ ++++ G  P++ T   +LK L + G++G+A  LF V+       N+   S
Sbjct: 357 NVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICS 416

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
             ++  CK   L +A +L+N +   ++  D+  ++ LIDGL KA +L+   EL       
Sbjct: 417 VFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQE 476

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           GL+ DVV +  +++ +   G V  A   +  M   G  PN+++YS L+ G  +  +L E 
Sbjct: 477 GLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEV 536

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
             L  +++ + +  +   Y+ + D   K  K R+
Sbjct: 537 VKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCRE 570



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 73/123 (59%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++GL +   +E A+ +  ++ Q G  P++VT   ++   C NGQ+ NA+ LF ++   G
Sbjct: 453 LIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENG 512

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN++T+S L++ F K  KLE+  +L + M++ D+     IY+I+ D + K  + +E  
Sbjct: 513 CTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWL 572

Query: 304 ELL 306
           ++L
Sbjct: 573 DIL 575


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 229/435 (52%), Gaps = 5/435 (1%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G   C +  L+  L +  +++ A  M+ +++  G  P+++T N ++  LC  G++  A  
Sbjct: 164 GYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKL 223

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +      PN  T+++LI   C+   L+ AF +++ M++    P+ + YS LI+GL 
Sbjct: 224 IMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLC 283

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             GRL+E  ++L   + +G++  V  ++  + +    G    AV+   +M   G +PN+ 
Sbjct: 284 SEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +++ LI GL + G+   A GL+ ++L   L P+ +TY++LI+  C  G+    F+++  M
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403

Query: 415 IKRGLKPDAVVCSLLIN--GLMGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           +  G  P     + +I    LMGD   A+  F + ++    PN+  +NTL+ G C+    
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            + ++L  +M    +KPD  T+T LI G +  G L  A  LF+ M++ G++P+ +TY+AI
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G F    +   L +F  M  +G  P    YNV+++   K  ++  A    G++  +GL
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGL 583

Query: 590 EPDIITYNTIICGYC 604
            P++ITY + I G C
Sbjct: 584 LPNVITYTSFIDGLC 598



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 248/515 (48%), Gaps = 13/515 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F R+ +D        YS LI      G+++E++++   M   GI  +       +  L D
Sbjct: 260 FDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCD 319

Query: 160 SNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           +    +  +L   M+ +G CV     +  L++GL R G  E A  ++ +++  G VP  V
Sbjct: 320 AGCSSEAVELLGKMKKRG-CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++ +LC+ G+   A ++F  +L  G  P+  T++ +I  FC    ++KA  +++ M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           ++    P++I Y+ LI G  K G L     LL      GLK D   ++ ++  +   G +
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A   +  M+  G  PN ++Y+ +I G     ++ +A  LF +++     PS  TY+ +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           I GF K+  + +  +    M+K+GL P+ +  +  I+GL      G A + F +  +   
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 450 IPNLFIFNTLMDGCCRLKRATDT--VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            PNL+ +++L+ G C+  RA D     L   +  Y  +P+V T+T L++G+  +G    A
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             L   M K+GL P    Y A++ G  K   +   L++F  M+  G    ++ Y  L+  
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L KE  ++ A  +F  + ++    D + +  ++ G
Sbjct: 739 LCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDG 773



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 212/433 (48%), Gaps = 9/433 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NGL  +G +E A  M  +++Q+G  P + T    L  LC  G    A  L   +
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  PN+ TF+ LI+   ++ K E A  LY+ M+   LVP  + Y+ LI+ L   GR 
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +    +    L  G       ++ ++  +  +GD+ +A+  +D+ML  G  PNVI+Y+ L
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+QG L  A  L   +    L+P   TY+ LI GF + GKL    SL+  M++ G+
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ V  + +I+G      + DAL  F++ V    +P+   +N ++ G  +    ++   
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
               M    + P+VIT+T  I G+   G    A  +F +M KR   P++ TYS++I+GL 
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLC 633

Query: 535 KGKNISVGLHMFKLMER---NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           + +  +    M+ L+ R    G  P++  Y  L+  L  E     A +L   +  +GL+P
Sbjct: 634 Q-EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 592 DIITYNTIICGYC 604
               Y  ++ G C
Sbjct: 693 SEEIYRALLIGEC 705



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 186/362 (51%), Gaps = 5/362 (1%)

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           +F+TL+    K   ++ A  +Y  M+   + P L+ ++ +I+ L K GR++E   ++   
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
                  +   ++S++  +    ++  A   +DRM+  G  PN ++YS LI GLC +GRL
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  +  +++ + +EP++ TY+  +   C +G   +   L   M KRG  P+    + L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 430 INGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I+GL  D     A+  + + +   L+P    +N L++  C   R      +F  M  +  
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            P   T+  +I+     G +  A+++F +MLK G +P+VITY+ +I+G  K  N++  + 
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + ++M+ NG+ PD   Y  L++   +   L+ A  LF  + + G+ P+ +TY  II GY 
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528

Query: 605 SL 606
           +L
Sbjct: 529 NL 530



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 123/305 (40%), Gaps = 41/305 (13%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F+ +    +      Y+ +I+ Y  + K+D+++ +F  M + G   S      ++S    
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
           +NS+ +    C  M  +G       Y   ++GL R G    AF +  ++ +R + PN+ T
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 216 CNKILKRLCINGQIGNAS--SLFDVLLLVGPKPNVVTFSTLINAFCKEA----------- 262
            + ++  LC  G+  +A   +L   L   G +PNV T++TL+   C E            
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 263 ------------------------KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
                                   K+E A  ++  M  +     L  Y  LI  L K   
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           ++E   +  T L++    D VV++ ++D  +  G+    ++    M +     N  +Y +
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVM 804

Query: 359 LIKGL 363
           L + L
Sbjct: 805 LAREL 809



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 22/209 (10%)

Query: 419 LKPDAVVCSLLINGLMGDALRFFFQ-SVRMTLIPNLFIFNTLMDGCCR--LKRATDTVKL 475
           LKP  VV  L  +      LRFFF  S R     ++  F ++++   R  L    D V++
Sbjct: 76  LKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRI 135

Query: 476 FMLMG-------------------MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            M+                      Y+    + + T L+  +     +  A  ++ +ML 
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G+ P ++T++ +I+ L K   +     +   + R    P+   Y  L+    +  NLD 
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           A  +F ++   G +P+ +TY+T+I G CS
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCS 284


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 241/498 (48%), Gaps = 12/498 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I++     +  E++++   M+  G   SPD+V    ++        V +   L   
Sbjct: 198 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNE 257

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  +++ L +   ++ A  + RQ++ +G  P+ VT N I+     +G 
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH 317

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              ++ +F  +   G  P+ VTFS+ +++ CK  + + A +++  M     +PD++ YSI
Sbjct: 318 WKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSI 377

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ G    GR  + N L  +  D+G+  +    + ++ A+   G +  A+  +  M   G
Sbjct: 378 LLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQG 437

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV++YS LI   C+ GRL +A   F Q++   +EP+   Y SLI GFC  G L    
Sbjct: 438 VRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAK 497

Query: 409 SLYDNMIKRGL-KPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
                M+ +GL +P+     +++ SL I G + DA   F   + +   P +  FN+L+DG
Sbjct: 498 EFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDG 557

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C + +      +   M    I+PDV+T+  L+ G    G +   ++LF +ML + + P 
Sbjct: 558 YCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPT 617

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +TY+ ++ GL +    S    MF  M  +G A DI  Y +LL  L +    D A+ LF 
Sbjct: 618 TVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFH 677

Query: 583 QLTDRGLEPDIITYNTII 600
           +L     + DI   NT+I
Sbjct: 678 KLGAMDCKFDITILNTMI 695



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 247/518 (47%), Gaps = 17/518 (3%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAY-MSDMGIYLSPDLVQR---LMSCL 157
           RL R  L       +  ++      + DE+V++  + MS++     PD +     + S  
Sbjct: 149 RLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCV--PDAISYNTVIKSLC 206

Query: 158 VDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
            DS S      + R  +  G C      +  +++G  ++G +  A ++  +++Q+G VP+
Sbjct: 207 GDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPD 266

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           + T N I+  LC    +  A  +   ++  G +P+ VT++ +I+ +      +++ +++ 
Sbjct: 267 VGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFR 326

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M    L+PD + +S  +  L K GR K+  E+      +G   D+V +S ++  Y   G
Sbjct: 327 KMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEG 386

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
                   +  M + G + N    +ILI    ++G + EA  +F ++  + + P+++TYS
Sbjct: 387 RFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYS 446

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSVRM 447
           +LI  FC+ G+L D    +  MI  G++P+  V   LI+G  + GD   A  F  + +  
Sbjct: 447 TLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSK 506

Query: 448 TLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
            L  PN+  F++++   C   R  D   +F L+     +P ++T   LI G    G +  
Sbjct: 507 GLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEK 566

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +   M+  G+ PDV+T + ++ G  K   I  GL +F+ M    V P    YN++L+
Sbjct: 567 AFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLD 626

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L++     AA K+F ++ D G   DI TY  ++ G C
Sbjct: 627 GLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 664



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/550 (22%), Positives = 253/550 (46%), Gaps = 45/550 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I  + + G++ ++  +F  M   G+         ++  L  + ++ +   + R M 
Sbjct: 235 FNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMV 294

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  +++G    G  + +  M R++  +G +P+ VT +  +  LC +G+  
Sbjct: 295 DKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSK 354

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV---------- 280
           +A  +F  +   G  P++V++S L++ +  E +      L++ M +  +V          
Sbjct: 355 DAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILI 414

Query: 281 -------------------------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
                                    P+++ YS LI    + GRL +  E     +  G++
Sbjct: 415 SAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE 474

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF-LPNVISYSILIKGLCQQGRLVEACG 374
            +  V+ S++  +   GD+ +A +    M++ G   PN++ +S +I  LC +GR+++A  
Sbjct: 475 PNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQD 534

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           +F  V+     P+++T++SLIDG+C  GK+   F + D M+  G++PD V  + L++G  
Sbjct: 535 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYC 594

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               + D L  F + +   + P    +N ++DG  R  R +   K+F  M       D+ 
Sbjct: 595 KSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDID 654

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+ +L++G+        AI LF ++       D+   + +I+ L+K +       +F  +
Sbjct: 655 TYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAI 714

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             +G+ P+++ Y V++  L+KE +++ A  +F  +   G  P     N II         
Sbjct: 715 STSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDI 774

Query: 610 LIDGYFKSQI 619
           +  GY+ S++
Sbjct: 775 VKAGYYMSKV 784



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 37/268 (13%)

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDG 397
           R+L  G     I  +  +K LC   R  EA      VL+ R+      P  ++Y+++I  
Sbjct: 149 RLLRAGLKTGTIQATTFLKCLCHAKRTDEAV----DVLLHRMSELSCVPDAISYNTVIKS 204

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
            C   + ++   +   M K G +     CS                       P++  FN
Sbjct: 205 LCGDSRSQEALDMVQRMAKEGGR-----CS-----------------------PDVVSFN 236

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           T++ G  +    +    LF  M    + PDV T+  ++  +    ++  A  +  QM+ +
Sbjct: 237 TVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDK 296

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G+ PD +TY+AIIHG     +      MF+ M   G+ PD   ++  ++ L K      A
Sbjct: 297 GVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDA 356

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYCS 605
            ++F  +T +G  PDI++Y+ ++ GY +
Sbjct: 357 EEIFQYMTTKGHMPDIVSYSILLHGYAT 384



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 35/294 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI+ Y  +GK++++  +   M  +GI   PD+V         +N+            
Sbjct: 551 FNSLIDGYCLVGKMEKAFGVLDAMVSVGI--EPDVV---------TNNT----------- 588

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                    L++G  + G I++   + R+++ +   P  VT N +L  L   G+   A  
Sbjct: 589 ---------LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKK 639

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  ++  G   ++ T+  L+   C+    ++A  L++ +  MD   D+ I + +I+ L+
Sbjct: 640 MFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALY 699

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  R +E N+L       GL  +V  +  ++   +  G V  A   +  M   G  P+  
Sbjct: 700 KVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSR 759

Query: 355 SYSILIKGLCQQGRLVEACGLFGQV--LIRRLEPSLLTYSSLIDGFCKSGKLRD 406
             + +I+ L Q+G +V+A     +V   I  LE S  T S L+  F   GK R+
Sbjct: 760 LLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEAS--TTSLLMSLFSSKGKHRE 811


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 240/504 (47%), Gaps = 66/504 (13%)

Query: 108 LGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSD-MGIYLSPDLVQRLMSCLVDSN 161
           + +FGC      Y+ L++ +    + +E++E+   M+D  G+   PD+V           
Sbjct: 257 MPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVS---------- 306

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
                              Y  ++NG  R+G ++ A+++  Q+I RG  P++VT N ++ 
Sbjct: 307 -------------------YNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVID 347

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC    +  A ++F  +L  G KP+  T++ LI+ +    K ++  +L   M   DL P
Sbjct: 348 GLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEP 407

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D  IY++L+D L K GR  E   +  + + +G+K D ++                AV  +
Sbjct: 408 DCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMI--------------DEAVCIF 453

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           D+M   G  PNV++Y  LI  LC+ GR+ +A   F Q++            + + G C  
Sbjct: 454 DKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMI------------NEVYGLCTV 501

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVV-----CSLLINGLMGDALRFFFQSVRMTLIPNLFIF 456
            K      L   M+ +G++ D VV     C L   G + +A R     +R+ + P++  +
Sbjct: 502 EKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISY 561

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           NTL+DG C   R  +  KL  +M    +KP+  T+  L+ G      +  A  L  +ML 
Sbjct: 562 NTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLM 621

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G TPDV+TY+ I+HGLF+    S    ++  M  +    D+  YN++LN L K   +D 
Sbjct: 622 NGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDE 681

Query: 577 ALKLFGQLTDRGLEPDIITYNTII 600
           A K+F  L  +GL+  IIT+N +I
Sbjct: 682 AFKMFQSLCSKGLQLHIITFNIMI 705



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 241/494 (48%), Gaps = 61/494 (12%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C Y  L+    R G +E+ F +   +++ G+  N +  N++LK LC   ++  A+   ++
Sbjct: 196 CTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT---NI 252

Query: 239 LLLVGPK----PNVVTFSTLINAFCKEAKLEKAFQLYNLMME---MDLVPDLIIYSILID 291
           LL   P+    PNVV+++TL+  FC E + E+A +L ++M +   +   PD++ Y+ +I+
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G F+ G++ +   L L  +DRG+  DVV +++V+D       V RA   + +ML+ G  P
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKP 372

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  +Y+ LI G    G+  E   L  ++    LEP    Y+ L+D  CK+G+  +  +++
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIF 432

Query: 412 DNMIKRGLKPDAVV-----------------------------CSL------------LI 430
           D++I++G+KPDA++                             C L            +I
Sbjct: 433 DSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMI 492

Query: 431 NGLMG--------DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           N + G         A    F+ +   +  ++ +FNTLM   CR  R  +  +L  LM   
Sbjct: 493 NEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRV 552

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            ++PDVI++  L+ G    G    A  L   M+  GL P+  TY+ ++HG  K + I   
Sbjct: 553 GVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDA 612

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             + + M  NG  PD+  YN +L+ L +      A +L+  + +   + D+ TYN I+ G
Sbjct: 613 YSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNG 672

Query: 603 YCSLNSCLIDGYFK 616
            C  N+C +D  FK
Sbjct: 673 LCK-NNC-VDEAFK 684



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 196/412 (47%), Gaps = 53/412 (12%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+  T+S LI  FC+  +LE  F ++ L+++     + I+++ L+ GL  A RL E   +
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 306 LLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL---PNVISYSILIK 361
           LL  +   G   +VV +++++  +        A++    M +   L   P+V+SY+ +I 
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G  ++G++ +A  LF Q++ R + P ++TY+++IDG CK+  +    +++  M+ +G+KP
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKP 372

Query: 422 DAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
                + LI+G +      + +R   +     L P+ FI+  L+D  C+  R T+   +F
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIF 432

Query: 477 MLMGMYNIKPD---------------------VITHTVLIRGIASQGSLSSAILLF---- 511
             +    IKPD                     V+ +  LI  +   G +  AIL F    
Sbjct: 433 DSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMI 492

Query: 512 -------------------FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
                              F+ML +G+  DV+ ++ ++  L +   +     + +LM R 
Sbjct: 493 NEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRV 552

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           GV PD+  YN L++        D A KL   +   GL+P+  TYNT++ GYC
Sbjct: 553 GVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYC 604



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 225/518 (43%), Gaps = 99/518 (19%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           +I  L ++ + D A  VF +M+ +  K  N         G + C    LI  Y+  GK  
Sbjct: 345 VIDGLCKAQVVDRAKAVFQQMLDKGVKPSN---------GTYNC----LIHGYLSTGKWK 391

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVY-EFLMNGL 188
           E V +   MS     L PD    + + L+D         LC+     G C     + + +
Sbjct: 392 EVVRLLEEMSTHD--LEPDCF--IYALLLDY--------LCK----NGRCTEARNIFDSV 435

Query: 189 LRKGV-----IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA----------- 232
           +RKG+     I+ A  +  ++ Q+G  PN+V    ++  LC  G++ +A           
Sbjct: 436 IRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEV 495

Query: 233 ------------SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
                         L   +L  G + +VV F+TL+   C+E ++ +A +L  LM+ + + 
Sbjct: 496 YGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVR 555

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           PD+I Y+ L+DG    GR  E  +LL   +  GLK +   +++++  Y     +  A   
Sbjct: 556 PDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSL 615

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
              ML  G  P+V++Y+ ++ GL Q GR  EA  L+  ++  R +  + TY+ +++G CK
Sbjct: 616 LREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCK 675

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
           +  + + F ++ ++  +GL+   +     + +LL  G   DA+                 
Sbjct: 676 NNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAM----------------- 718

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
                              LF  +  Y + PDV T+ ++   +  +GSL    +LF  M 
Sbjct: 719 ------------------DLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAME 760

Query: 516 KRGLTPDVITYSAIIHGLFKGKNIS-VGLHMFKLMERN 552
           + G  P+    +A++       +IS  G ++ KL E+N
Sbjct: 761 ENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKN 798



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 119/237 (50%), Gaps = 11/237 (4%)

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR--- 439
           ++ P   TYS LI  FC+ G+L  GF+++  ++K G + + +V + L+ GL  DA R   
Sbjct: 190 KVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLC-DAKRLDE 248

Query: 440 ----FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG---MYNIKPDVITHT 492
                 ++       PN+  +NTL+ G C   RA + ++L  +M      +  PDV+++ 
Sbjct: 249 ATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYN 308

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            +I G   +G +  A  LF QM+ RG+ PDV+TY+ +I GL K + +     +F+ M   
Sbjct: 309 TVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDK 368

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           GV P    YN L++  +        ++L  +++   LEPD   Y  ++   C    C
Sbjct: 369 GVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRC 425



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 175/400 (43%), Gaps = 42/400 (10%)

Query: 61  CVSSPNI-AQLIHVLLQSD-MRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFL 118
           C  + NI   +I   ++ D M D A  +FDKM  Q G + N              +Y  L
Sbjct: 425 CTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQ-GLSPNVV------------NYGAL 471

Query: 119 IENYVRIGKIDESV-----------------------EIFAYMSDMGIYLSPDLVQRLMS 155
           I+   ++G++D+++                       E+   M D GI L   +   LM 
Sbjct: 472 IDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMC 531

Query: 156 CLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
            L     V +  +L   M   G       Y  L++G    G  + A  +   ++  G  P
Sbjct: 532 DLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKP 591

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           N  T N +L   C   +I +A SL   +L+ GP P+VVT++T+++   +  +  +A +LY
Sbjct: 592 NEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELY 651

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M+      D+  Y+I+++GL K   + E  ++  +   +GL+L ++ F+ ++ A +  
Sbjct: 652 LNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKG 711

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G    A+  +  +   G +P+V +Y ++ + L ++G L E   LF  +      P+    
Sbjct: 712 GKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRML 771

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           ++L+  F   G +    +    + ++    +A   S+LI+
Sbjct: 772 NALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLIS 811


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 240/504 (47%), Gaps = 38/504 (7%)

Query: 110 DFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV-GQ 165
           D+G D   +    +  V  G ++E+ + F  + + G+ LS       ++CL     + G 
Sbjct: 34  DWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGM 93

Query: 166 YYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
             K+       G C     Y  LMN L R G I  A H+  ++  +G +P++V+   I+ 
Sbjct: 94  VLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIID 153

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
             C  G++     L   + L G KPN+ T+S++I   CK  K+ +  ++   MM+  + P
Sbjct: 154 GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFP 213

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D +IY+ LIDG  K G  +   +L      R +  D + FS+++    G G V  A + +
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + M+  GF P+ ++Y+ LI G C+ G + +A  L  Q++   L P+++TY++L DG CKS
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
           G+L     L   M ++GL+                               N+  +NT+++
Sbjct: 334 GELDTANELLHEMCRKGLQ------------------------------LNISTYNTIVN 363

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+       VKL   M    + PD IT+T L+      G +  A  L  +ML RGL P
Sbjct: 364 GLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQP 423

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            V+T++ +++GL     +  G  + K M   G+ P+ A YN ++       N+  + +++
Sbjct: 424 TVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIY 483

Query: 582 GQLTDRGLEPDIITYNTIICGYCS 605
             +  +G+ PD  TYN +I G+C 
Sbjct: 484 RGMCAQGVVPDSNTYNILIKGHCK 507



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 250/481 (51%), Gaps = 38/481 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ Y  +G++ + V++   M   G  L P+L     ++  L  S  V +  K+ R 
Sbjct: 148 YTTIIDGYCHVGELQKVVQLVKEMQLKG--LKPNLYTYSSIILLLCKSGKVVEGEKVLRE 205

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G      +Y  L++G  + G  + A+ +  ++  R  VP+ +  + ++  L  +G+
Sbjct: 206 MMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGK 265

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  LF+ ++  G +P+ VT++ LI+ +CK  +++KAF L+N M+++ L P+++ Y+ 
Sbjct: 266 VVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTA 325

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L DGL K+G L   NELL     +GL+L++  ++++++     G++ +AV+  + M   G
Sbjct: 326 LADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAG 385

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ I+Y+ L+    + G +V+A  L  ++L R L+P+++T++ L++G C SGKL DG 
Sbjct: 386 LHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGE 445

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L   M+++G+ P+A                                +N++M   C    
Sbjct: 446 RLLKWMLEKGIMPNAAT------------------------------YNSIMKQYCIRNN 475

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
              + +++  M    + PD  T+ +LI+G     ++  A  L  +M+++       +Y+A
Sbjct: 476 MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNA 535

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I G FK K +     +F+ M R G+     IYN+ ++M  +E N++  L+L  +  ++ 
Sbjct: 536 LIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKC 595

Query: 589 L 589
           L
Sbjct: 596 L 596



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 185/333 (55%), Gaps = 6/333 (1%)

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+IL++ LF+ G+++E + LL+    +G   DVV +++++D Y  +G++ + VQ    M 
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  PN+ +YS +I  LC+ G++VE   +  +++ R + P  + Y++LIDGFCK G  +
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLM 460
             + L+  M  R + PD++  S LI GL G     +A + F + ++    P+   +  L+
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALI 292

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG C+L        L   M    + P+V+T+T L  G+   G L +A  L  +M ++GL 
Sbjct: 293 DGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQ 352

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
            ++ TY+ I++GL K  NI   + + + M+  G+ PD   Y  L++   K   +  A +L
Sbjct: 353 LNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAREL 412

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
             ++ DRGL+P ++T+N ++ G C ++  L DG
Sbjct: 413 LREMLDRGLQPTVVTFNVLMNGLC-MSGKLEDG 444



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 222/443 (50%), Gaps = 16/443 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ---IGNASSLF 236
           V++     L+  G++  A     +++  G   +  +CN  L   C++ +   +G    +F
Sbjct: 41  VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLT--CLSSKRDMLGMVLKVF 98

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL---VPDLIIYSILIDGL 293
                +G   N  +++ L+N+  +  K+ +A   ++L+M M+    +PD++ Y+ +IDG 
Sbjct: 99  SEFPQLGVCWNTESYNILMNSLFRLGKIREA---HHLLMRMEFKGCIPDVVSYTTIIDGY 155

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
              G L++  +L+     +GLK ++  +SS++      G V    +    M+  G  P+ 
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           + Y+ LI G C+ G    A  LF ++  R + P  + +S+LI G   SGK+ +   L++ 
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275

Query: 414 MIKRGLKPDAVVCSLLINGL--MGDALRFFF---QSVRMTLIPNLFIFNTLMDGCCRLKR 468
           MIK+G +PD V  + LI+G   +G+  + FF   Q V++ L PN+  +  L DG C+   
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                +L   M    ++ ++ T+  ++ G+   G++  A+ L  +M + GL PD ITY+ 
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++   +K   +     + + M   G+ P +  +NVL+N L     L+   +L   + ++G
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG 455

Query: 589 LEPDIITYNTIICGYCSLNSCLI 611
           + P+  TYN+I+  YC  N+  I
Sbjct: 456 IMPNAATYNSIMKQYCIRNNMRI 478


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 255/518 (49%), Gaps = 23/518 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR----LMSCLVDSNSVGQYYKLC 170
           Y+ LI    +  ++ E+VE+   +   G  L+ D+V      L  C +     G   +L 
Sbjct: 263 YNVLIHGLCKGDRVSEAVEVKRSLGGKG--LAADVVTYCTLVLGFCRLQQFEAG--IQLM 318

Query: 171 RAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M   GF   E     L++GL ++G I++A+ +  +V + GFVPN+   N ++  LC  
Sbjct: 319 DEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKG 378

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A  L+  + L+  +PN +T+S LI++FC+  +L+ A   ++ M++  +   +  Y
Sbjct: 379 GDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAY 438

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LI+G  K G L     L +   ++G++     F+S++  Y     V +A + Y++M++
Sbjct: 439 NSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID 498

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PNV +++ LI GLC   ++ EA  LF +++ R+++P+ +TY+ LI+G+C+ GK+  
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDK 558

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            F L ++M ++GL PD      LI+GL     +  A  F     +  +  N   ++ L+ 
Sbjct: 559 AFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLH 618

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+  R  + +     M    I  D++ H VLI G   Q    +   L   M  +GL P
Sbjct: 619 GYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRP 678

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D + Y+++I    K  +       + LM      P++  Y  L+N L K   +D A  LF
Sbjct: 679 DNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLF 738

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            ++    + P+ ITY       C L++   +G  K  I
Sbjct: 739 KRMQAANVPPNSITYG------CFLDNLTKEGNMKEAI 770



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/534 (26%), Positives = 250/534 (46%), Gaps = 47/534 (8%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM-- 173
           S L++   + GKID++ E+   +   G   +  +   L++ L     + +   L   M  
Sbjct: 334 SGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSL 393

Query: 174 ---RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
              R  G   Y  L++   R G ++ A     ++IQ G    +   N ++   C  G + 
Sbjct: 394 MNLRPNGI-TYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLS 452

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A SLF  +   G +P   TF++LI+ +CK+ +++KAF+LYN M++  + P++  ++ LI
Sbjct: 453 AAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALI 512

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL    ++ E +EL    ++R +K   V ++ +++ Y   G + +A +  + M   G +
Sbjct: 513 SGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLV 572

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +Y  LI GLC  GR+ +A      +  + ++ + + YS+L+ G+C+ G+L +  S 
Sbjct: 573 PDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSA 632

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFF---------QSVR--------------- 446
              MI+RG+  D V  ++LI+G +    R  F         Q +R               
Sbjct: 633 SCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSK 692

Query: 447 ----------------MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
                               PN+  +  LM+G C+         LF  M   N+ P+ IT
Sbjct: 693 EGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSIT 752

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +   +  +  +G++  AI L   MLK GL  + +T++ II G  K         +   M 
Sbjct: 753 YGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMT 811

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            NG+ PD   Y+ L+    +  N+ A++KL+  + +RGLEPD++ YN +I G C
Sbjct: 812 ENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCC 865



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 229/490 (46%), Gaps = 10/490 (2%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G  YS LI+++ R G++D ++  F  M   GI  +      L++       +     L  
Sbjct: 400 GITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFI 459

Query: 172 AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M  KG       +  L++G  +   ++ AF ++ ++I  G  PN+ T   ++  LC   
Sbjct: 460 EMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTN 519

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  AS LFD L+    KP  VT++ LI  +C++ K++KAF+L   M +  LVPD   Y 
Sbjct: 520 KMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYR 579

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL   GR+ +  + +     + +KL+ + +S+++  Y   G +  A+     M+  
Sbjct: 580 PLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQR 639

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G   +++ +++LI G  +Q        L   +  + L P  + Y+S+ID + K G  +  
Sbjct: 640 GINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKA 699

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           F  +D M+     P+ V  + L+NGL     M  A   F +     + PN   +   +D 
Sbjct: 700 FECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDN 759

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +     + + L   M +  +  + +TH ++IRG    G    A  +  +M + G+ PD
Sbjct: 760 LTKEGNMKEAIGLHHAM-LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPD 818

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +TYS +I+   +  N+   + ++  M   G+ PD+  YN+L+        LD A +L  
Sbjct: 819 CVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRD 878

Query: 583 QLTDRGLEPD 592
            +  RG+ PD
Sbjct: 879 DMLRRGIIPD 888



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 152/594 (25%), Positives = 273/594 (45%), Gaps = 23/594 (3%)

Query: 28  SDLQFNQANAILANLIKTNNPTPAIQFFKWT--HNCV--SSPNIAQLIHVLLQSDMRDVA 83
           S L+ +    +L N +  ++   A++FF +   H  +  S+ + A ++H L+ S +   A
Sbjct: 65  STLRPHHVEQVLMNTL--DDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPA 122

Query: 84  SHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS------FLIENYVRIGKIDESVEIFAY 137
           + +   ++++       F  F DS     C +S       L++NYV   +I ++V I   
Sbjct: 123 NSLLHTLLLRESHPKCVFSHFLDSYKR--CKFSSTLGFNLLVQNYVLSSRIFDAVVIVKL 180

Query: 138 MSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENA 197
           M    +      +  L++ L+        ++L       G     +  + ++R       
Sbjct: 181 MFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKD 240

Query: 198 FHMHRQVIQ----RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           F   ++ I+     GF  +IVT N ++  LC   ++  A  +   L   G   +VVT+ T
Sbjct: 241 FLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCT 300

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L+  FC+  + E   QL + M+E+   P     S L+DGL K G++ +  EL++     G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
              ++ V+++++++    GD+ +A   Y  M      PN I+YSILI   C+ GRL  A 
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             F +++   +  ++  Y+SLI+G CK G L    SL+  M  +G++P A   + LI+G 
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGY 480

Query: 434 MGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
             D     A + + + +   + PN++ F  L+ G C   +  +  +LF  +    IKP  
Sbjct: 481 CKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTE 540

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+ VLI G    G +  A  L   M ++GL PD  TY  +I GL     +S        
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD 600

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           + +  V  +   Y+ LL+   +E  L  AL    ++  RG+  D++ +  +I G
Sbjct: 601 LHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDG 654



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 230/514 (44%), Gaps = 57/514 (11%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQ-FGKT---YN------------------FFRLFRDS 107
           LI    +S   DVA   FD+M+    G+T   YN                  F  +    
Sbjct: 406 LIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKG 465

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
           +      ++ LI  Y +  ++ ++ +++  M D GI  +      L+S L  +N + +  
Sbjct: 466 VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEAS 525

Query: 168 KLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
           +L   +  +        Y  L+ G  R G I+ AF +   + Q+G VP+  T   ++  L
Sbjct: 526 ELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C  G++  A    D L     K N + +S L++ +C+E +L +A      M++  +  DL
Sbjct: 586 CSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDL 645

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + +++LIDG  K    K   +LL    D+GL+ D V+++S++D Y   G   +A + +D 
Sbjct: 646 VCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDL 705

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+     PNV++Y+ L+ GLC+ G +  A  LF ++    + P+ +TY   +D   K G 
Sbjct: 706 MVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGN 765

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +++   L+  M+K                                L+ N    N ++ G 
Sbjct: 766 MKEAIGLHHAMLK-------------------------------GLLANTVTHNIIIRGF 794

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+L R  +  K+   M    I PD +T++ LI      G++ +++ L+  ML RGL PD+
Sbjct: 795 CKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDL 854

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           + Y+ +I+G      +     +   M R G+ PD
Sbjct: 855 VAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 157/351 (44%), Gaps = 28/351 (7%)

Query: 261 EAKLEKAFQLYNLM-MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           +AKL  A + +N + +  ++      Y+I++  L  +      N LL T L R       
Sbjct: 82  DAKL--ALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRE-SHPKC 138

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           VFS  +D+Y                       + + +++L++      R+ +A  +   +
Sbjct: 139 VFSHFLDSYKRCK-----------------FSSTLGFNLLVQNYVLSSRIFDAVVIVKLM 181

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDA 437
               L P + T S+L++G  K  K    + L+D  +  G++PD   CS ++  +  + D 
Sbjct: 182 FANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDF 241

Query: 438 LRFFFQSVRMTLIP----NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           LR   + +R         ++  +N L+ G C+  R ++ V++   +G   +  DV+T+  
Sbjct: 242 LRAK-EKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCT 300

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L+ G        + I L  +M++ G +P     S ++ GL K   I     +   + R G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             P++ +YN L+N L K  +LD A  L+  ++   L P+ ITY+ +I  +C
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFC 411



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 13/227 (5%)

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR 439
           L + +  S  +Y+ ++     S       SL   ++ R   P  V               
Sbjct: 95  LHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCV-------------FS 141

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F  S +     +   FN L+       R  D V +  LM   N+ P+V T + L+ G+ 
Sbjct: 142 HFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLL 201

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
                 +   LF + +  G+ PD  T SA++  + + K+        + ME NG    I 
Sbjct: 202 KVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIV 261

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            YNVL++ L K   +  A+++   L  +GL  D++TY T++ G+C L
Sbjct: 262 TYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRL 308


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 251/506 (49%), Gaps = 35/506 (6%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F RL R  LG     Y+ LI+ + + G++D++ ++F  M + GI  +      L++ L  
Sbjct: 212 FGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCK 271

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
           +  + +  ++ R M G G       Y  L++G    G+ + +  + +++     VP++  
Sbjct: 272 TKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGN 331

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
           CN  +  LC +G+I  A  +FD ++L GPKP+V+++  L++ +     +     L+N+M+
Sbjct: 332 CNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMV 391

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
              +VPD  +++ LI+   + G + +   +      +G+  D++ FS+V+ A+  +G + 
Sbjct: 392 CEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLD 451

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY-SSL 394
            A++ ++ M++ G  P+   YS LI+G C +  LV+A  L   +L + + P  + + +S+
Sbjct: 452 DAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSI 511

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           I+  CK G++ +G  + D +I  G +P                              NL 
Sbjct: 512 INNLCKEGRVAEGKDVVDLIIHTGQRP------------------------------NLI 541

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            FN+L+DG C +    + V L   M    ++PD+ T+  L+ G    G +  A+ LF  M
Sbjct: 542 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 601

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           L + +T   ++Y+ I+HGLF+ +   V   MF  M  +G+A  I  Y  +L  L +    
Sbjct: 602 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCT 661

Query: 575 DAALKLFGQLTDRGLEPDIITYNTII 600
           D A  L  +L    ++ DI+T+N +I
Sbjct: 662 DEANMLLEKLFSMNVKFDILTFNIVI 687



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 262/553 (47%), Gaps = 34/553 (6%)

Query: 65  PNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           PN+   + LI+ L ++   D A  V  +MV    +  N               Y+ LI  
Sbjct: 257 PNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNM-------------TYNCLIHG 303

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVGQYYKLCRAMRGKG-- 177
           Y   G   ESV +F  MS     L PD+      M+ L     + +   +  +M  KG  
Sbjct: 304 YSTSGMWKESVRVFKEMSSS--LLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPK 361

Query: 178 --FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                Y  L++G    G I    ++   ++  G VP+    N ++      G +  +  +
Sbjct: 362 PDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 421

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F+ +   G  P+++TFST+I+AFC+  +L+ A + +N M++  + PD  +YS LI G   
Sbjct: 422 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 481

Query: 296 AGRLKEGNELLLTALDRGLKLDVV-VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
              L +  EL+   L +G+    +  F+S+++     G V       D +++ G  PN+I
Sbjct: 482 RRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI 541

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +++ L+ G C  G + EA GL   +    +EP + TY++L+DG+CK G++ D  +L+ +M
Sbjct: 542 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 601

Query: 415 IKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + + +   +V  +++++GL        A   F + +   +  ++  + T++ G CR    
Sbjct: 602 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCR-NNC 660

Query: 470 TDTVKLFM--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           TD   + +  L  M N+K D++T  ++IR +   G    A  LF  +   GL P ++TY 
Sbjct: 661 TDEANMLLEKLFSM-NVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYR 719

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I  L K ++     ++F  ME++   PD  I N ++ ML+ +  +  A     ++  +
Sbjct: 720 VMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 779

Query: 588 GLEPDIITYNTII 600
           G+ P+  T + +I
Sbjct: 780 GILPEATTTSLLI 792



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 202/376 (53%), Gaps = 6/376 (1%)

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  LL  G  P+V +++ LI+ F KE +++KA  L+  M E  ++P+++ YS LI+GL 
Sbjct: 211 VFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLC 270

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K   + +   +L   +  G++ + + ++ ++  Y   G    +V+ +  M +   +P+V 
Sbjct: 271 KTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVG 330

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           + +  +  LC+ GR+ EA  +F  ++++  +P +++Y +L+ G+  +G +    +L++ M
Sbjct: 331 NCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVM 390

Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           +  G+ PD  V + LIN     G+M  +L  F    +  + P++  F+T++   CRL R 
Sbjct: 391 VCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRL 450

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT-YSA 528
            D ++ F  M    + PD   ++ LI+G  ++  L  A  L   ML +G+ P  I  +++
Sbjct: 451 DDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTS 510

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           II+ L K   ++ G  +  L+   G  P++  +N L++      N+  A+ L   +   G
Sbjct: 511 IINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 570

Query: 589 LEPDIITYNTIICGYC 604
           +EPDI TYNT++ GYC
Sbjct: 571 VEPDIYTYNTLVDGYC 586



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 16/251 (6%)

Query: 371 EACGLFGQVLIRRLEPSLLT-YSSLIDGFCK---SGKLRDGFSLYDNMIKR-------GL 419
           +A  LF ++L+RR  P+     + L+    +   S   RD  +L   + KR         
Sbjct: 126 DARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEA 185

Query: 420 KPDAVVCSLLIN----GLMGD-ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P     ++LIN        D  L  F + +R  L P++F +N L+DG  +         
Sbjct: 186 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    I P+V+T++ LI G+     +  A  +  QM+  G+ P+ +TY+ +IHG  
Sbjct: 246 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 305

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
                   + +FK M  + + PD+   N  +  L K   +  A  +F  +  +G +PD+I
Sbjct: 306 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 365

Query: 595 TYNTIICGYCS 605
           +Y  ++ GY +
Sbjct: 366 SYGALLHGYAT 376



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/353 (21%), Positives = 147/353 (41%), Gaps = 37/353 (10%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +A  ++++++    P P I+FF    N     N+ +   V    D+ D        ++I 
Sbjct: 487 KAKELISDMLSKGIPPPCIKFFTSIIN-----NLCKEGRVAEGKDVVD--------LIIH 533

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
            G+  N               ++ L++ Y  +G + E+V +   M  +G+   PD+    
Sbjct: 534 TGQRPNLI------------TFNSLVDGYCLVGNMKEAVGLLDSMESVGV--EPDIYT-- 577

Query: 154 MSCLVDS----NSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVI 205
            + LVD       +     L R M  K   +    Y  +++GL +      A  M  ++I
Sbjct: 578 YNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMI 637

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           + G   +I T   +L  LC N     A+ L + L  +  K +++TF+ +I A  K  + +
Sbjct: 638 ESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQ 697

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A +L+  +    LVP ++ Y ++I  L K    ++ + L  +        D  + + ++
Sbjct: 698 EAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 757

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
              +  G+V +A     ++   G LP   + S+LI      G+  E   L  +
Sbjct: 758 RMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 227/439 (51%), Gaps = 9/439 (2%)

Query: 173 MRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+GKG   +    N +L    +    E A+ ++ ++ +     ++VT N ++  LC  G+
Sbjct: 147 MKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGK 206

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A     ++  +G KPNVVT++T+I+ +C   ++E A  +++LM    + PD   Y  
Sbjct: 207 LKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGS 266

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            I G+ K G+L+E + +L    + GL+   V +++++D Y   G++  A    D+M+  G
Sbjct: 267 FISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREG 326

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            +P V +Y++LI  L    ++ EA G+  ++  + L P  +TY+ LI+G+C+ G ++  F
Sbjct: 327 LMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAF 386

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+D MI +G++P  V  + LI      G M  A   F + VR  + P+L +FN L+DG 
Sbjct: 387 TLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGH 446

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C          +   M    + PD +T   L++G   +G + +A  L  +M  RG+ PD 
Sbjct: 447 CANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDH 506

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           I+Y+ +I G  K  ++     +   M   G  P +  YN L+  L K    D A +L  +
Sbjct: 507 ISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKE 566

Query: 584 LTDRGLEPDIITYNTIICG 602
           +  +G+ P+  TY ++I G
Sbjct: 567 MISKGITPNDNTYLSLIEG 585



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 211/393 (53%), Gaps = 10/393 (2%)

Query: 219 ILKRLCINGQIGN-ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           +L R C   + G+ A   FD++   G  P+V   + +++ F K  + EKA+ LY  M  M
Sbjct: 126 LLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRM 185

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNEL--LLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
            +   ++ ++I+I+ L K G+LK+  E   L+ AL  G+K +VV +++++  Y   G V 
Sbjct: 186 RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEAL--GIKPNVVTYNTIIHGYCSRGRVE 243

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A   +D M   G  P+  +Y   I G+C++G+L EA G+  ++    L P+ +TY++LI
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI 450
           DG+C  G L   F   D M++ GL P     ++LI+ L     M +A     +     L+
Sbjct: 304 DGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV 363

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P+   +N L++G CR         L   M    I+P  +T+T LI  ++ +G +  A  L
Sbjct: 364 PDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDL 423

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F +++++G+ PD+I ++A+I G     N+     M K M++  V PD   +N L+    +
Sbjct: 424 FEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCR 483

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           E  ++AA +L  ++  RG++PD I+YNT+I GY
Sbjct: 484 EGKVEAARELIEEMKSRGIKPDHISYNTLISGY 516



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 211/463 (45%), Gaps = 44/463 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YYKLC 170
           Y  LI     + + D++ E F  M   G+         ++S  + SN   +    Y ++ 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           R         +  ++N L ++G ++ A      +   G  PN+VT N I+   C  G++ 
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +FD++   G KP+  T+ + I+  CKE KLE+A  +   M E+ L P  + Y+ LI
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG    G L+   +     +  GL   V  ++ ++ A      +  A      M   G +
Sbjct: 304 DGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV 363

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y+ILI G C+ G + +A  L  +++ + ++P+ +TY+SLI    K G+++    L
Sbjct: 364 PDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDL 423

Query: 411 YDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++ ++++G+ PD ++ + LI     NG M  A     +  +M ++P+   FNTLM G CR
Sbjct: 424 FEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCR 483

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL---------------- 509
             +     +L   M    IKPD I++  LI G + +G +  A                  
Sbjct: 484 EGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLT 543

Query: 510 -------------------LFFQMLKRGLTPDVITYSAIIHGL 533
                              L  +M+ +G+TP+  TY ++I G+
Sbjct: 544 YNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 43/302 (14%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVD 159
           ++ R+ L      Y+ LI       K+DE+  I   MS+ G  L PD V    L++    
Sbjct: 321 KMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG--LVPDSVTYNILINGYCR 378

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
             +V + + L   M  KG       Y  L+  L ++G ++ A  +  +++++G  P+++ 
Sbjct: 379 CGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIM 438

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N ++   C NG +  A ++   +  +   P+ VTF+TL+   C+E K+E A +L   M 
Sbjct: 439 FNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMK 498

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
              + PD I Y+ LI G  K G +K+                                  
Sbjct: 499 SRGIKPDHISYNTLISGYSKRGDMKD---------------------------------- 524

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A +  D ML+ GF P +++Y+ LI+GLC+      A  L  +++ + + P+  TY SLI
Sbjct: 525 -AFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLI 583

Query: 396 DG 397
           +G
Sbjct: 584 EG 585



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%)

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI 450
           Y  LI   C+  +  D F  +D M  +G+ P    C+        D L  F +S      
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACN--------DMLSLFLKS------ 169

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
                            R      L+  M    IK  V+T  ++I  +  +G L  A   
Sbjct: 170 ----------------NRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEF 213

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
              M   G+ P+V+TY+ IIHG      +     +F LM+  GV PD   Y   ++ + K
Sbjct: 214 IGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCK 273

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           E  L+ A  +  ++ + GL P  +TYNT+I GYC+
Sbjct: 274 EGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCN 308


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 151/597 (25%), Positives = 286/597 (47%), Gaps = 67/597 (11%)

Query: 70  LIHVLLQSDMRDVASHVFDKM------------------VIQFGKTYNFFRLFRD--SLG 109
           L+   L+  M + A  +FD+M                  + + G      R+ R+   +G
Sbjct: 198 LMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVG 257

Query: 110 DFGCDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
              CD+++  +++  V+ G+++E++ +   M D G  +   +   LM        VG   
Sbjct: 258 FDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNAL 317

Query: 168 KLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
            L +     G      +Y  L+ G  + G+ + A+ + RQ+  +G +P+    + +LK L
Sbjct: 318 NLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGL 377

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
             + +  +A  LF+ +   G  P+V T++ LI+  C+  KL +A  L++ M +  + P +
Sbjct: 378 LNDRRWKDAVCLFEEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSI 436

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ---- 339
             Y+ L+ G  K G + E  +L       G K +VV + ++M  Y+   D   A      
Sbjct: 437 NTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDE 496

Query: 340 -----------TYDRMLNG--------------------GFLPNVISYSILIKGLCQQGR 368
                      TY+ ++NG                    GF+P +++Y+ +I G  + G 
Sbjct: 497 MKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGM 556

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           +  A  ++ Q+  + L P+++TY+S IDG+C++G       + +++ +RGL+PD V  + 
Sbjct: 557 MGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNA 616

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LING      M  AL+     ++  L PN  ++N+L+ G   L    +  K +  M    
Sbjct: 617 LINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGG 676

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           I  D  T+T LI G +  G+++ A+ L+ +M+ +G  PD  T++A+ HGL +  +I    
Sbjct: 677 IVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAK 736

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            + + M R  V P++ IYN+L+N  +++C L  A +L  ++ + G++PD  TY+ ++
Sbjct: 737 KLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 242/504 (48%), Gaps = 49/504 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL----MSCLVDSNSVGQYYKLC 170
           +  L+   ++ G  +++V +F  M   G  + PD  QR+    ++ L      G+  ++ 
Sbjct: 195 FDALMSACLKEGMHEDAVRLFDEMP--GAEIDPD--QRVYALAITALCKLGDGGRALRML 250

Query: 171 RAMRGKGF--C--VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           R M+  GF  C   Y  +++ L++ G +E A  ++ ++   G   +++    +++  C+ 
Sbjct: 251 REMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLR 310

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            ++GNA +LF   L  G  P  V +  LI    +    +KA++L   M    L+P     
Sbjct: 311 QEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFEL 370

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           S+++ GL    R K+   L     D GL  DV  +++++  +     +  A+  +DRM  
Sbjct: 371 SLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKK 429

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P++ +Y+ L+ G C++G + EA  L+ ++ +   +P+++TY +L+ G+       +
Sbjct: 430 AGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDN 489

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
            ++L D M + G     V C                         N + +N L++G C +
Sbjct: 490 AYALLDEMKQNG-----VSC-------------------------NDYTYNVLINGICMV 519

Query: 467 KRATDT---VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            R  +    +K FM  G     P ++T+  +I G    G + SA  ++ QM ++GL P++
Sbjct: 520 DRVCEVDGMLKSFMSEGFI---PTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNI 576

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           ITY++ I G  +     + L M   + R G+ PDI  YN L+N   +E N+  AL+L   
Sbjct: 577 ITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVI 636

Query: 584 LTDRGLEPDIITYNTIICGYCSLN 607
           L   GL P+ + YN++I GY +LN
Sbjct: 637 LLKDGLAPNTVVYNSLITGYKNLN 660



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 172/325 (52%), Gaps = 12/325 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS--CLVDSNSVGQYYKLCRA 172
           Y  L+  Y+     D +  +   M   G+  +      L++  C+VD   V +   + ++
Sbjct: 474 YITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDR--VCEVDGMLKS 531

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
              +GF      Y  ++NG ++ G++ +AF +++Q+ ++G  PNI+T    +   C  G 
Sbjct: 532 FMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGC 591

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  + + +   G +P++V ++ LIN FC+E  +  A QL  ++++  L P+ ++Y+ 
Sbjct: 592 SDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNS 651

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G      +KE ++   + +  G+  D   +++++D +   G+V  A++ Y  M+  G
Sbjct: 652 LITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKG 711

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE--PSLLTYSSLIDGFCKSGKLRD 406
           ++P+  +++ L  GLC+ G +  A  L  +  +RRL+  P++  Y+ LI+G+ +  KL++
Sbjct: 712 YIPDAFTFTALTHGLCRSGDIDGAKKLLEE--MRRLDVRPNVFIYNMLINGYLRDCKLQE 769

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLIN 431
            F L+D M+  G++PD     +L++
Sbjct: 770 AFRLHDEMLNMGIQPDDTTYDILVS 794



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 167/342 (48%), Gaps = 6/342 (1%)

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A   Y  M+   +VPD+   + L+    +    K+   L +    RG ++D  +F ++M 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A +  G    AV+ +D M      P+   Y++ I  LC+ G    A  +  ++     + 
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
              TY +++D   K+G++ +   + D M   G K D +V + L+ G      +G+AL  F
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            ++++  ++P   ++  L+ GC ++       +L   M    + P     +++++G+ + 
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
                A+ LF +M   GL PDV TY+ +IH   +   +   L++F  M++ GV P I  Y
Sbjct: 381 RRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTY 439

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           N LL    K+  +D A+KL+ ++   G +P+++TY T++ GY
Sbjct: 440 NSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGY 481


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 270/564 (47%), Gaps = 54/564 (9%)

Query: 48  PTPAIQFFKWTHNCV---SSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFF 101
           P  A++ FK    C    ++P I     LI+   ++   D+   VF              
Sbjct: 96  PALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFG------------- 142

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           RL R  LG     Y+ LI+ + + G++D++ ++F  M + GI  +      L++ L  + 
Sbjct: 143 RLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTK 202

Query: 162 SVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            + +  ++ R M G G       Y  L++G    G+ + +  + +++     VP++  CN
Sbjct: 203 EMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCN 262

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
             +  LC +G+I  A  +FD ++L GPKP+V+++  L++ +     +     L+N+M+  
Sbjct: 263 SFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCE 322

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            +VPD  +++ LI+   + G + +   +      +G+  D++ FS+V+ A+  +G +  A
Sbjct: 323 GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDA 382

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY-SSLID 396
           ++ ++ M++ G  P+   YS LI+G C +  LV+A  L   +L + + P  + + +S+I+
Sbjct: 383 MEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIIN 442

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIF 456
             CK G++ +G  + D +I  G +P                              NL  F
Sbjct: 443 NLCKEGRVAEGKDVVDLIIHTGQRP------------------------------NLITF 472

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N+L+DG C +    + V L   M    ++PD+ T+  L+ G    G +  A+ LF  ML 
Sbjct: 473 NSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLH 532

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           + +T   ++Y+ I+HGLF+ +   V   MF  M  +G+A  I  Y  +L  L +    D 
Sbjct: 533 KRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDE 592

Query: 577 ALKLFGQLTDRGLEPDIITYNTII 600
           A  L  +L    ++ DI+T+N +I
Sbjct: 593 ANMLLEKLFSMNVKFDILTFNIVI 616



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 266/564 (47%), Gaps = 35/564 (6%)

Query: 54  FFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGD 110
           F+K     +  PN+   + LI+ L ++   D A  V  +MV    +  N           
Sbjct: 176 FYKMEEQGIM-PNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNM---------- 224

Query: 111 FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVGQYYK 168
               Y+ LI  Y   G   ESV +F  MS     L PD+      M+ L     + +   
Sbjct: 225 ---TYNCLIHGYSTSGMWKESVRVFKEMSSS--LLVPDVGNCNSFMTALCKHGRIKEARD 279

Query: 169 LCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           +  +M  KG       Y  L++G    G I    ++   ++  G VP+    N ++    
Sbjct: 280 IFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYA 339

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G +  +  +F+ +   G  P+++TFST+I+AFC+  +L+ A + +N M++  + PD  
Sbjct: 340 RLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTA 399

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV-VFSSVMDAYVGIGDVGRAVQTYDR 343
           +YS LI G      L +  EL+   L +G+    +  F+S+++     G V       D 
Sbjct: 400 VYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDL 459

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           +++ G  PN+I+++ L+ G C  G + EA GL   +    +EP + TY++L+DG+CK G+
Sbjct: 460 IIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGR 519

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNT 458
           + D  +L+ +M+ + +   +V  +++++GL        A   F + +   +  ++  + T
Sbjct: 520 IDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYAT 579

Query: 459 LMDGCCRLKRATDTVKLFM--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           ++ G CR    TD   + +  L  M N+K D++T  ++IR +   G    A  LF  +  
Sbjct: 580 VLGGLCR-NNCTDEANMLLEKLFSM-NVKFDILTFNIVIRAMFKVGRRQEAKELFAAIST 637

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            GL P ++TY  +I  L K ++     ++F  ME++   PD  I N ++ ML+ +  +  
Sbjct: 638 YGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAK 697

Query: 577 ALKLFGQLTDRGLEPDIITYNTII 600
           A     ++  +G+ P+  T + +I
Sbjct: 698 AGNYLSKIDKKGILPEATTTSLLI 721



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 202/376 (53%), Gaps = 6/376 (1%)

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  LL  G  P+V +++ LI+ F KE +++KA  L+  M E  ++P+++ YS LI+GL 
Sbjct: 140 VFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLC 199

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K   + +   +L   +  G++ + + ++ ++  Y   G    +V+ +  M +   +P+V 
Sbjct: 200 KTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVG 259

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           + +  +  LC+ GR+ EA  +F  ++++  +P +++Y +L+ G+  +G +    +L++ M
Sbjct: 260 NCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVM 319

Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           +  G+ PD  V + LIN     G+M  +L  F    +  + P++  F+T++   CRL R 
Sbjct: 320 VCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRL 379

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT-YSA 528
            D ++ F  M    + PD   ++ LI+G  ++  L  A  L   ML +G+ P  I  +++
Sbjct: 380 DDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTS 439

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           II+ L K   ++ G  +  L+   G  P++  +N L++      N+  A+ L   +   G
Sbjct: 440 IINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 499

Query: 589 LEPDIITYNTIICGYC 604
           +EPDI TYNT++ GYC
Sbjct: 500 VEPDIYTYNTLVDGYC 515



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 16/251 (6%)

Query: 371 EACGLFGQVLIRRLEPSLLT-YSSLIDGFCK---SGKLRDGFSLYDNMIKR-------GL 419
           +A  LF ++L+RR  P+     + L+    +   S   RD  +L   + KR         
Sbjct: 55  DARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEA 114

Query: 420 KPDAVVCSLLIN----GLMGD-ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P     ++LIN        D  L  F + +R  L P++F +N L+DG  +         
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    I P+V+T++ LI G+     +  A  +  QM+  G+ P+ +TY+ +IHG  
Sbjct: 175 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 234

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
                   + +FK M  + + PD+   N  +  L K   +  A  +F  +  +G +PD+I
Sbjct: 235 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 294

Query: 595 TYNTIICGYCS 605
           +Y  ++ GY +
Sbjct: 295 SYGALLHGYAT 305



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/351 (20%), Positives = 145/351 (41%), Gaps = 33/351 (9%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +A  ++++++    P P I+FF    N     N+ +   V    D+ D        ++I 
Sbjct: 416 KAKELISDMLSKGIPPPCIKFFTSIIN-----NLCKEGRVAEGKDVVD--------LIIH 462

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQ 151
            G+  N               ++ L++ Y  +G + E+V +   M  +G+   PD+    
Sbjct: 463 TGQRPNLI------------TFNSLVDGYCLVGNMKEAVGLLDSMESVGV--EPDIYTYN 508

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L+        +     L R M  K   +    Y  +++GL +      A  M  ++I+ 
Sbjct: 509 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 568

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   +I T   +L  LC N     A+ L + L  +  K +++TF+ +I A  K  + ++A
Sbjct: 569 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 628

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +L+  +    LVP ++ Y ++I  L K    ++ + L  +        D  + + ++  
Sbjct: 629 KELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRM 688

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
            +  G+V +A     ++   G LP   + S+LI      G+  E   L  +
Sbjct: 689 LLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 250/508 (49%), Gaps = 9/508 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  Y   GK DE+  +       G   S      +++CL     V +  ++   MR
Sbjct: 346 YNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR 405

Query: 175 ---GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
                    Y  L++ L + G +E A  +   + + G  PNI+T N ++ RLC   ++  
Sbjct: 406 QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDE 465

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A S+F  L      P+  TF +LI+   +  +++ A+ LY  M++ D +P++++Y+ LI 
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQ 525

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
             FK GR ++G+++    + RG   D+++ +S MD     G+V +    ++ +   G +P
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVP 585

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V SYSILI GL + G   E   LF ++  + L   +L Y+++IDGFCKSGK+   + L 
Sbjct: 586 DVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLL 645

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + M  +GL+P  V    +++GL     + +A   F ++  + +  N+ I+++L+DG  ++
Sbjct: 646 EEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKV 705

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  +   +   +    + P+  T   L+  +     +  A + F  M     +P+ +TY
Sbjct: 706 GRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTY 765

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           S +I+GL   +  +     ++ M++ G+ P+   Y  ++  L K  N+  A  LF +   
Sbjct: 766 SIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKA 825

Query: 587 RGLEPDIITYNTIICGYCSLNSCLIDGY 614
            G  PD   YN +I G  S N  + D Y
Sbjct: 826 SGGVPDSACYNAMIEGLSSANKAM-DAY 852



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 146/590 (24%), Positives = 274/590 (46%), Gaps = 36/590 (6%)

Query: 32  FNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFD 88
           F+    ++  L   N P P +  F          N+     L+ V  +    D A  + D
Sbjct: 203 FSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLD 262

Query: 89  KMVIQFGKTYNFFRLFRDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           +M                    F  D   Y+  I+ + ++GK+D + + F  M   G  L
Sbjct: 263 EM----------------KSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQG--L 304

Query: 146 SPDLVQ--RLMSCLVDSNSVGQYYKLCRAM--RGKGFCVYEF--LMNGLLRKGVIENAFH 199
            PD V    L+  L  +  + +  +L   +       CVY +  ++ G    G  + A+ 
Sbjct: 305 VPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYS 364

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +  +  ++G +P+++  N IL  L   G++  A  + D +      PN+ T++ LI+  C
Sbjct: 365 LLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLC 423

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K  +LE A ++ + M E  L P+++  +I+ID L KA +L E   + L    +    D  
Sbjct: 424 KAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSR 483

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            F S++D     G V  A   Y++ML+   +PNV+ Y+ LI+   + GR  +   ++ ++
Sbjct: 484 TFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEM 543

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG---- 435
           + R   P L+  +S +D   K+G++  G +L++ +  +GL PD    S+LI+GL+     
Sbjct: 544 VHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFS 603

Query: 436 -DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +  + F++     L  ++  +NT++DG C+  +     +L   M    ++P V+T+  +
Sbjct: 604 RETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           + G+A    L  A +LF +    G+  +V+ YS++I G  K   I     + + + + G+
Sbjct: 664 VDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            P+   +N LL+ L+K   +D A   F  + +    P+ +TY+ +I G C
Sbjct: 724 TPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLC 773



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 246/476 (51%), Gaps = 17/476 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV--------GQY 166
           Y+ LI+   + G+++ ++++   M + G++ +   V  ++  L  +  +        G  
Sbjct: 415 YNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLD 474

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           +K+C +   + FC    L++GL R+G +++A+ ++ +++    +PN+V    +++     
Sbjct: 475 HKVC-SPDSRTFCS---LIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKC 530

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+  +   ++  ++  G  P+++  ++ ++   K  ++EK   L+  +    LVPD+  Y
Sbjct: 531 GRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSY 590

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           SILI GL KAG  +E  +L     ++GL LDV+ +++V+D +   G V +A Q  + M  
Sbjct: 591 SILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKT 650

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P V++Y  ++ GL +  RL EA  LF +     ++ +++ YSSLIDGF K G++ +
Sbjct: 651 KGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDE 710

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVR-MTLIPNLFIFNTLMD 461
            + + + ++++GL P++   + L++ L+     D  +  FQ+++ +   PN   ++ +++
Sbjct: 711 AYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMIN 770

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C +++       +  M    +KP+ IT+T +I G+A  G++  A  LF +    G  P
Sbjct: 771 GLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVP 830

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           D   Y+A+I GL           +F+     G   +     VLL+ L K   L+ A
Sbjct: 831 DSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 138/596 (23%), Positives = 261/596 (43%), Gaps = 39/596 (6%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMR----DVASHV 86
           + +Q   I+  + +  +   A Q+F+W        +  ++ +  L    R    D    +
Sbjct: 96  EMSQPEVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQI 155

Query: 87  FDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE---NYVRIGKIDESVEIFAYMSDMGI 143
            ++M                S+  FG      +E   ++V+  K+ E+  +   M     
Sbjct: 156 LEEM----------------SVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKF 199

Query: 144 YLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR----KGVIENAFH 199
             +      L+  L  +N       L   M+  G+     L   L+R    +G I+ A  
Sbjct: 200 RPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALS 259

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +  ++    F  ++V  N  +      G++  A   F  +   G  P+ VT++TLI   C
Sbjct: 260 LLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLC 319

Query: 260 KEAKLEKAFQLYNLMMEMDL---VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           K  +L++A +L+    E+DL   VP +  Y+ +I G   AG+  E   LL     +G   
Sbjct: 320 KARRLDEAVELFE---ELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIP 376

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            V+ ++ ++      G V  A++ +D M      PN+ +Y+ILI  LC+ G L  A  + 
Sbjct: 377 SVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQ 435

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
             +    L P+++T + +ID  CK+ KL +  S++  +  +   PD+     LI+GL   
Sbjct: 436 DTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRR 495

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + DA   + + +    IPN+ ++ +L+    +  R  D  K++  M      PD++  
Sbjct: 496 GRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLL 555

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
              +  +   G +     LF ++  +GL PDV +YS +IHGL K         +F  M+ 
Sbjct: 556 NSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKE 615

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            G+  D+  YN +++   K   +D A +L  ++  +GL+P ++TY +++ G   ++
Sbjct: 616 QGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKID 671


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 216/422 (51%), Gaps = 5/422 (1%)

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
           K ++     ++  +I+    P IVT N ++   C  G++G A  + DV+ + G  PN V+
Sbjct: 185 KSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVS 244

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           ++ L+N    + + ++A +L   M  + L      Y+ LI G  K    +E N+L    L
Sbjct: 245 YNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREML 304

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
            RG    VV ++++M +   +G V  A +  D M+N   +P+++SY+ LI G  + G   
Sbjct: 305 GRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFA 364

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           EA  LF ++  + L PS++TY++LIDG C++G L     + D+MIK GL PD V  ++L+
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424

Query: 431 NGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
            G   MG+   A   F + +   L P+   + T + G  +L   +    +   M      
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFP 484

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PD+IT+ VLI G+   G+   A  L  +M   G+ PD +TY++IIH       +     +
Sbjct: 485 PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEV 544

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           F  M + G+ P +  Y VL++       LD A K F ++ D+G+ P++ITYN +I G C 
Sbjct: 545 FSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCK 604

Query: 606 LN 607
            N
Sbjct: 605 EN 606



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 239/482 (49%), Gaps = 9/482 (1%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEF 183
           ++E  E+++ M    I  +      +M        VG+  ++   MR  G       Y  
Sbjct: 188 VNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNV 247

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NGL  KG  + A  +  Q+   G   +  T N +++  C       A+ L   +L  G
Sbjct: 248 LVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRG 307

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P VVT++T++ + C+  ++  A +  ++M+  DL+PDL+ Y+ LI G  + G   E  
Sbjct: 308 ALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEAL 367

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L      + L   VV +++++D     G++  A    D M+  G  P+V++++IL++G 
Sbjct: 368 LLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGF 427

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           CQ G L  A  LF ++L R L+P  + Y++ I G  K G     F + + M   G  PD 
Sbjct: 428 CQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDL 487

Query: 424 VVCSLLINGL--MG--DALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  ++LINGL  +G  D      Q +R+  ++P+   + +++             ++F  
Sbjct: 488 ITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSD 547

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    I P V+T+TVLI   A +G L  A   F +M  +G++P+VITY+A+I+GL K   
Sbjct: 548 MLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENM 607

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           + V  ++F  ME  GV+P+   Y +L+N          ALKL+  + DR ++PD  T++ 
Sbjct: 608 MDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSA 667

Query: 599 II 600
           ++
Sbjct: 668 LM 669



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 215/444 (48%), Gaps = 14/444 (3%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           D +  FGCD     Y+ L+      G+ D + E+   MS +G+ +S      L+      
Sbjct: 231 DVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKK 290

Query: 161 NSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
               +   L R M G+G       Y  +M  L R G + +A      ++    +P++V+ 
Sbjct: 291 EMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSY 350

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++      G    A  LF  L      P+VVT++TLI+  C+   L+ A  + + M++
Sbjct: 351 NTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIK 410

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             L PD++ ++IL+ G  + G L    EL    L RGLK D + +++ +   + +G+  +
Sbjct: 411 HGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSK 470

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A    + M   GF P++I+Y++LI GLC+ G   +A  L  ++ +  + P  +TY+S+I 
Sbjct: 471 AFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIH 530

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIP 451
               SG LR    ++ +M+K+G+ P  V  ++LI+     G +  A ++F +     + P
Sbjct: 531 AHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSP 590

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+  +N L+ G C+         LF  M    + P+  T+T+LI   ++      A+ L+
Sbjct: 591 NVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLY 650

Query: 512 FQMLKRGLTPDVITYSAIIHGLFK 535
             ML R + PD  T+SA++  L K
Sbjct: 651 KDMLDREIKPDSCTHSALMKHLSK 674



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 188/381 (49%), Gaps = 9/381 (2%)

Query: 235 LFDVLLLVG----PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           + DVL+ +G     + +V     LI  F K+  LEK   ++  M+   L+PD+   + ++
Sbjct: 120 VLDVLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVL 179

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L     + E  E+    +   ++  +V F+++MD+    G+VGRAV+  D M   G  
Sbjct: 180 KLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCD 239

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN +SY++L+ GL  +G    A  L  Q+ +  L+ S  TY+ LI GFCK     +   L
Sbjct: 240 PNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDL 299

Query: 411 YDNMIKRGLKP-----DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M+ RG  P     + ++ SL   G + DA R+    V   L+P+L  +NTL+ G  R
Sbjct: 300 RREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSR 359

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           L    + + LF  +   N+ P V+T+  LI G    G+L  A  +   M+K GL PDV+T
Sbjct: 360 LGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVT 419

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           ++ ++ G  +  N+ +   +F  M   G+ PD   Y   +   +K  N   A  +  ++ 
Sbjct: 420 FTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMK 479

Query: 586 DRGLEPDIITYNTIICGYCSL 606
             G  PD+ITYN +I G C L
Sbjct: 480 AEGFPPDLITYNVLINGLCKL 500



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 206/443 (46%), Gaps = 47/443 (10%)

Query: 82  VASHVFDKMVIQFGKTYNFFR---LFRDSLGDFG----CDYSFLIENYVRIGKIDESVEI 134
           V++H ++ ++  F K   F     L R+ LG         Y+ ++ +  R+G++ ++   
Sbjct: 275 VSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRY 334

Query: 135 FAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK---LCRAMRGKGFC----VYEFLMNG 187
              M +    L PDLV    + +   + +G + +   L   +R K        Y  L++G
Sbjct: 335 LDVMVNED--LMPDLVS-YNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDG 391

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
             R G ++ A  M   +I+ G  P++VT   +++  C  G +  A  LFD +L  G KP+
Sbjct: 392 GCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPD 451

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
            + ++T I    K     KAF +   M      PDLI Y++LI+GL K G   + NEL+ 
Sbjct: 452 CIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQ 511

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
                G+  D V ++S++ A++  G + +A + +  ML  G  P+V++Y++LI     +G
Sbjct: 512 KMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRG 571

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           RL  A   F ++  + + P+++TY++LI G CK   +   ++L+  M  +G+ P+    +
Sbjct: 572 RLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYT 631

Query: 428 LLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           +LIN                                  L+   D +KL+  M    IKPD
Sbjct: 632 ILIN------------------------------ENSNLQYWQDALKLYKDMLDREIKPD 661

Query: 488 VITHTVLIRGIASQGSLSSAILL 510
             TH+ L++ ++    L + + L
Sbjct: 662 SCTHSALMKHLSKDYKLLAVLRL 684


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 219/425 (51%), Gaps = 5/425 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y +L+  L + G  ++ +  +  ++  G VPN  T   +L+ LC   +   A S+F  + 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  PNV ++S LI   C+  K+++A +L N M++    P+++ Y  L+ GL K G+LK
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  +L    + RG   D VV++ ++D +   GD+G A + ++ ML  G +P V +Y+ L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G  ++G       LF  +L +   P++ T+++L+DGFCK G + +   L+  M   G  
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V  + LI G+       +A R   + +R  + P++  +N L+DG  +       +KL
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  +    ++PD  +++ +I  +   G + +A ++F  M+  G  PD      ++ GL +
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           G+ ++    +F+ M +    P I  YN+L+  L K    D   ++F +LT+RG  PD+  
Sbjct: 380 GERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEI 439

Query: 596 YNTII 600
              I+
Sbjct: 440 SKVIL 444



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 192/393 (48%), Gaps = 40/393 (10%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N +L+ L  +G+  +    ++ +L  G  PN  T+  L+ + C+  + E+A  ++  M  
Sbjct: 21  NYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAA 80

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
               P++  YSILI GL +  ++ E  ELL                              
Sbjct: 81  QGCSPNVFSYSILIAGLCRGQKVDEAAELL------------------------------ 110

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
                + M++GG  PNV++Y  L+ GLC+ G+L EA  LF +++ R   P  + Y+ LID
Sbjct: 111 -----NEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           GF K G + + + L++ M+++G  P     + L++G       G     F   +R   +P
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+F FN L+DG C++    +  +LF+ M      PDV+++  LIRG+ S+G    A  L 
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLL 285

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M++ G+ PD+++Y+ +I G  K   +   + +F  + ++G+ PD   Y+ +++ L + 
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             + AA  +F  +   G  PD      ++ G C
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 173/359 (48%), Gaps = 40/359 (11%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
             ++++ L+    K  + +  +  YN M+    VP+   Y  L+  L +A R +E   + 
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
                RG+                      A Q        G  PNV SYSILI GLC+ 
Sbjct: 76  -----RGM----------------------AAQ--------GCSPNVFSYSILIAGLCRG 100

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
            ++ EA  L  +++    +P+++TY SL+ G CK GKL++   L+  M+ RG  PD VV 
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           ++LI+G      MG+A R F + +    IP +F +N+L+ G  R         LF  M  
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
               P++ T   L+ G    G +  A  LF +M   G  PDV++Y+ +I G+        
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE 280

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              + + M R+GV PDI  YN+L++   K   LD A+KLF ++   GLEPD  +Y+TII
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 192/433 (44%), Gaps = 51/433 (11%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           L+  L Q+   + A  VF  M  Q G + N F             YS LI    R  K+D
Sbjct: 58  LLRSLCQAQRFEEARSVFRGMAAQ-GCSPNVF------------SYSILIAGLCRGQKVD 104

Query: 130 ESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEF 183
           E+ E+   M D G    P++V    L+S L     + +   L   M  +G      VY  
Sbjct: 105 EAAELLNEMIDGG--HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++G  +KG +  A+ +  +++++G +P + T N +L      G+ G   SLF  +L  G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN+ TF+ L++ FCK   + +A +L+  M  +   PD++ Y+ LI G+   G+  E  
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQ 282

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            LL   +  G+  D+V ++ ++D Y   G +  A++ +  +   G  P+  SYS +I  L
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+ G++  A  +F  ++     P       L+ G C+  +L +   L+  M+K       
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK------- 395

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
                             F+ V   LIP    +N LM   C+ KR+ D  ++F  +    
Sbjct: 396 ------------------FECV--PLIPE---YNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 484 IKPDVITHTVLIR 496
             PDV    V++ 
Sbjct: 433 FSPDVEISKVILE 445



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 186/404 (46%), Gaps = 22/404 (5%)

Query: 38  ILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQF 94
           +L +L +      A   F+       SPN+   + LI  L +    D A+ + ++M I  
Sbjct: 58  LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEM-IDG 116

Query: 95  GKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM 154
           G   N               Y  L+    ++GK+ E+V++F+ M   G      +   L+
Sbjct: 117 GHQPNVV------------TYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLI 164

Query: 155 SCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
                   +G+ Y+L   M  KG C+     Y  L++G  RKG       + + ++++G 
Sbjct: 165 DGFSKKGDMGEAYRLFEEMLEKG-CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           VPNI T N +L   C  G +  A  LF  +  +G  P+VV+++TLI   C + K  +A +
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQR 283

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L   M+   + PD++ Y+ILIDG  K+G L    +L       GL+ D   +S+++D   
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G VG A   +  M+  G  P+      L+ GLC+  RL E+C LF  ++     P + 
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIP 403

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            Y+ L+   CK+ +  D   ++  + +RG  PD  +  +++  L
Sbjct: 404 EYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 129/266 (48%), Gaps = 30/266 (11%)

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
           TY+ ML  G +PN  +Y  L++ LCQ  R  EA  +F  +  +   P++ +YS LI G C
Sbjct: 39  TYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLC 98

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           +  K+ +   L + MI  G +P                              N+  + +L
Sbjct: 99  RGQKVDEAAELLNEMIDGGHQP------------------------------NVVTYGSL 128

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           + G C++ +  + V LF  M      PD + + VLI G + +G +  A  LF +ML++G 
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P V TY++++ G  +         +FK M R G  P+I  +N LL+   K  ++  A +
Sbjct: 189 IPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHR 248

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCS 605
           LF ++   G  PD+++YNT+I G CS
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLIRGMCS 274



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 30/256 (11%)

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
             +SY+ L++ L + GR     G +  +L     P+  TY  L+   C++ +  +  S++
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             M  +G       CS                       PN+F ++ L+ G CR ++  +
Sbjct: 76  RGMAAQG-------CS-----------------------PNVFSYSILIAGLCRGQKVDE 105

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             +L   M     +P+V+T+  L+ G+   G L  A+ LF +M+ RG  PD + Y+ +I 
Sbjct: 106 AAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G  K  ++     +F+ M   G  P +  YN LL+   ++        LF  +  +G  P
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225

Query: 592 DIITYNTIICGYCSLN 607
           +I T+N ++ G+C + 
Sbjct: 226 NIFTFNNLLDGFCKMG 241


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 250/510 (49%), Gaps = 17/510 (3%)

Query: 108 LGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSD-MGIYLSPDLVQR--LMSCLVD 159
           + + GC      Y+ L++      + +E++E+   M+D  G    P++V    +++    
Sbjct: 152 MPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFT 211

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
              V + Y L   M  +G       Y  +++GL +  + + A  + +Q+I  GF PN  T
Sbjct: 212 EGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYT 271

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N ++      G+      + + +   G KP+  T+ +L+N  CK  +  +A   ++ M+
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
              + P +  Y ILI G    G L E +  L   ++ GL  D  +F+    AY   G + 
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 391

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           +A+  +++M   G  PNV++Y  LI  LC+ GR+ +A   F Q++   + P+++ ++SL+
Sbjct: 392 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 451

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLI 450
            G C   K      L   M+ +G+ P+AV     +C+L   G + +  R       + + 
Sbjct: 452 YGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVR 511

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P+ F +  L+ G C   R  +  K+F  M    + P  +T+  L+ G  S   +  A  L
Sbjct: 512 PDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 571

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F +ML++G+TP V+TY+ I+HGLF+ K  S    ++  M  +G   DI  YN++LN L K
Sbjct: 572 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 631

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              +D A K+F  L  +GL+ +IIT+  +I
Sbjct: 632 SNCVDEAFKMFQSLCSKGLQLNIITFTIMI 661



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 157/602 (26%), Positives = 259/602 (43%), Gaps = 53/602 (8%)

Query: 63  SSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENY 122
           + P   +  + LL +  R   S   +  V  F +     R   D +    C YS LI  +
Sbjct: 44  ARPASVRAFNHLLTAVSRARCSSASELAVSHFNR---MVRECSDKVAPNLCTYSILIGRF 100

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-- 180
            R+G ++     F  +   G  +    + +L+  L     VG+   +      +  C+  
Sbjct: 101 CRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPD 160

Query: 181 ---YEFLMNGLLRKGVIENAF---HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
              Y  L+ GL  +   E A    HM      R   PN+V+ + ++      GQ+    +
Sbjct: 161 TVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYN 220

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF  ++  G  P+VVT++T+I+  CK    ++A  ++  M++    P+   Y+ LI G  
Sbjct: 221 LFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYL 280

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             G+ KE  ++L     RGLK D   + S+++     G    A   +D M+  G  P V 
Sbjct: 281 SIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVS 340

Query: 355 SYSILIKGLCQQGRLVE----------------------------ACGL-------FGQV 379
           +Y ILI G   +G L E                             CG+       F ++
Sbjct: 341 TYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 400

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
               L P+++ Y +LID  CK G++ D    ++ MI  G+ P+ VV + L+ GL      
Sbjct: 401 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 460

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A    ++ +   + PN   FNTL+   C + R  +  +L  LM    ++PD  ++T L
Sbjct: 461 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 520

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G    G    A  +F  M+  GL+P  +TY+ ++HG      I     +F+ M R GV
Sbjct: 521 ISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 580

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGY 614
            P +  YN +L+ L +      A +L+  + + G + DI TYN I+ G C  N   +D  
Sbjct: 581 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC--VDEA 638

Query: 615 FK 616
           FK
Sbjct: 639 FK 640



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 250/537 (46%), Gaps = 26/537 (4%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           +I  L ++ + D A  VF +M+    K  N+              Y+ LI  Y+ IGK  
Sbjct: 240 VIDGLCKAQLFDRAEGVFQQMIDNGFKPNNY-------------TYNCLIHGYLSIGKWK 286

Query: 130 ESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEF 183
           E V++   MS  G  L PD      L++ L  +    +      +M  KG       Y  
Sbjct: 287 EVVQMLEEMSARG--LKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGI 344

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++G   KG +         +++ G  P+    N         G I  A  +F+ +   G
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 404

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PNVV +  LI+A CK  +++ A   +N M+   + P++++++ L+ GL    + +   
Sbjct: 405 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 464

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL+   LD+G+  + V F++++     +G V    +  D M + G  P+  SY+ LI G 
Sbjct: 465 ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGY 524

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C  GR  EA  +F  ++   L P+ +TY++L+ G+C + ++ D + L+  M+++G+ P  
Sbjct: 525 CLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 584

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  + +++GL       +A   +   +      +++ +N +++G C+     +  K+F  
Sbjct: 585 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQS 644

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +    ++ ++IT T++I  +   G    A+ LF  +   GL P+V+TY  +   L +  +
Sbjct: 645 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 704

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           +     +F  ME+NG AP+  + N L+  L+   ++  A     +L +R    +  T
Sbjct: 705 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST 761



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 162/330 (49%), Gaps = 32/330 (9%)

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ- 366
            A  R L+L+ ++        +G+ D   A++ +D +L+     +V +++ L+  + +  
Sbjct: 7   AAPARCLELERIIAERARSRSLGLDD---ALKLFDELLHHARPASVRAFNHLLTAVSRAR 63

Query: 367 ------------GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
                        R+V  C         ++ P+L TYS LI  FC+ G L  GF+ +  +
Sbjct: 64  CSSASELAVSHFNRMVRECS-------DKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLI 116

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKR 468
           +K G + D +  + L+ GL     +G+A+    Q +  +  +P+   +  L+ G C  KR
Sbjct: 117 LKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKR 176

Query: 469 ATDTVKLFMLMGMYNIK---PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           A + ++L  +M   + +   P+V++++++I G  ++G +     LF +M+ RG+ PDV+T
Sbjct: 177 AEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVT 236

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ +I GL K +       +F+ M  NG  P+   YN L++  +        +++  +++
Sbjct: 237 YTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMS 296

Query: 586 DRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
            RGL+PD  TY +++   C    C    +F
Sbjct: 297 ARGLKPDCYTYGSLLNYLCKNGRCREARFF 326



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 83/408 (20%), Positives = 174/408 (42%), Gaps = 56/408 (13%)

Query: 79  MRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM 138
           M D A  +F+KM  Q G + N              +Y  LI+   ++G++D++   F  M
Sbjct: 389 MIDKAMDIFNKMR-QHGLSPNVV------------NYGALIDALCKLGRVDDAEVKFNQM 435

Query: 139 SDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL----RKG 192
            + G+  +P++V    L+  L   +   +  +L   M  +G C      N L+      G
Sbjct: 436 INEGV--TPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 493

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            +     +   +   G  P+  +   ++   C+ G+   A  +FD ++ +G  P  VT++
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYN 553

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD- 311
           TL++ +C  ++++ A+ L+  M+   + P ++ Y+ ++ GLF+  R  E  EL L  ++ 
Sbjct: 554 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 613

Query: 312 ----------------------------------RGLKLDVVVFSSVMDAYVGIGDVGRA 337
                                             +GL+L+++ F+ ++ A +  G    A
Sbjct: 614 GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDA 673

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +  +  +   G +PNV++Y ++ + L ++G L E   LF  +      P+    ++L+  
Sbjct: 674 MDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 733

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
               G +    +    + +R    +A   SLL++    D  +   +S+
Sbjct: 734 LLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 228/453 (50%), Gaps = 28/453 (6%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+NGL + G  +    + R++      P++V  N I+  LC N  +G+A  L+  ++
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           + G  PNVVT++ L+  FC    L++AF L N M   ++ PD+  ++ LID L K G++K
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               +L   +   +K DVV ++S++D Y  +  V  A   +  M   G  PNV +Y+ +I
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC++  + EA  LF ++  + + P ++TY+SLIDG CK+  L    +L   M ++G++
Sbjct: 351 DGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 410

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD    ++L++ L     + +A  FF + +      N+  +N +++G C+     + + L
Sbjct: 411 PDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDL 470

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL---------------- 519
              M      PD IT   +I  +  +     A  +  +M+ RGL                
Sbjct: 471 KSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLA 530

Query: 520 -------TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
                   PDV+TY  ++ G F    +    ++F  M + GV P++  Y ++++ L K+ 
Sbjct: 531 VMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK 590

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            +D A+ LF ++  + + P+I+TY ++I   C 
Sbjct: 591 TVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCK 623



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 214/427 (50%), Gaps = 5/427 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           + ++++ L+          + ++    G  P++ T N ++   C    I  A S+   +L
Sbjct: 66  FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  PN +T +TLI   C   +++KA   ++ ++      + + Y  LI+GL K G  K
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               LL       +K DVV++++++ +      +G A   Y  M+  G  PNV++Y+ L+
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALV 245

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C  G L EA  L  ++ ++ + P + T+++LID   K GK++    +   M+K  +K
Sbjct: 246 YGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIK 305

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V  + LI+G      + +A   F+   +  + PN+  + T++DG C+ K   + + L
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSL 365

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M   N+ PD++T+T LI G+     L  AI L  +M ++G+ PDV +Y+ ++  L K
Sbjct: 366 FEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCK 425

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           G  +      F+ +   G   ++  YNV++N L K      A+ L  ++  +G  PD IT
Sbjct: 426 GGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAIT 485

Query: 596 YNTIICG 602
           + TIIC 
Sbjct: 486 FKTIICA 492



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/547 (23%), Positives = 256/547 (46%), Gaps = 67/547 (12%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVY 181
           G+I +++     +   G  L+    + L++ L  +       +L R + G        +Y
Sbjct: 147 GEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMY 206

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +++ L +  ++ +A  ++ ++I +G  PN+VT N ++   CI G +  A SL + + L
Sbjct: 207 NTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKL 266

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
               P+V TF+TLI+A  KE K++ A  +  +MM+  + PD++ Y+ LIDG F   ++K 
Sbjct: 267 KNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKN 326

Query: 302 GNELLLTA------------------------LDRGLKL-----------DVVVFSSVMD 326
              +  +                         +D  + L           D+V ++S++D
Sbjct: 327 AKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLID 386

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                  + RA+    +M   G  P+V SY+IL+  LC+ GRL  A   F ++L++    
Sbjct: 387 GLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHL 446

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSL------------- 428
           ++ TY+ +I+G CK+    +   L   M  +G  PDA+     +C+L             
Sbjct: 447 NVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKIL 506

Query: 429 --LINGLMGDALRFFFQSVRMTLI--------PNLFIFNTLMDGCCRLKRATDTVKLFML 478
             +I   + +A +   +  ++ L         P++  + TLMDG   +        +F  
Sbjct: 507 REMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYS 566

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    + P+V  +T++I G+  + ++  A+ LF +M  + + P+++TY+++I  L K  +
Sbjct: 567 MAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHH 626

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   + + K M+ +G+ PD+  Y +LL+ L K   L+ A ++F +L  +G   ++  Y  
Sbjct: 627 LERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTA 686

Query: 599 IICGYCS 605
           +I   C 
Sbjct: 687 MINELCK 693



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 221/450 (49%), Gaps = 28/450 (6%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C +  L++ L ++G ++ A  +   +++    P++VT N ++       ++ NA  +F  
Sbjct: 274 CTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYS 333

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G  PNV T++T+I+  CKE  +++A  L+  M   +++PD++ Y+ LIDGL K   
Sbjct: 334 MAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHH 393

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L+    L     ++G++ DV  ++ ++DA    G +  A + + R+L  G+  NV +Y++
Sbjct: 394 LERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNV 453

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +I GLC+     EA  L  ++  +   P  +T+ ++I    +  +      +   MI RG
Sbjct: 454 MINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARG 513

Query: 419 L-----------------------KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI 450
           L                       KPD V    L++G      +  A   F+   +M + 
Sbjct: 514 LQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVT 573

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN+  +  ++DG C+ K   + + LF  M   N+ P+++T+T LI  +     L  AI L
Sbjct: 574 PNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIAL 633

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
             +M + G+ PDV +Y+ ++ GL K   +     +F+ +   G   ++ +Y  ++N L K
Sbjct: 634 LKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCK 693

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               D AL L  ++ D+G  PD +T++ II
Sbjct: 694 AGLFDEALDLQXKMEDKGCMPDAVTFDIII 723



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 235/488 (48%), Gaps = 32/488 (6%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           ++S LV++        L +     G     C    LMN       I  AF +   +++RG
Sbjct: 69  ILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRG 128

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           + PN +T N ++K LC  G+I  A    D ++  G + N V++ TLIN  CK  + +   
Sbjct: 129 YHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVA 188

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           +L   +    + PD+++Y+ +I  L K   L +  +L    + +G+  +VV +++++  +
Sbjct: 189 RLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGF 248

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             +G +  A    + M      P+V +++ LI  L ++G++  A  +   ++   ++P +
Sbjct: 249 CIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDV 308

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +TY+SLIDG+    K+++   ++ +M + G+ P+    + +I+GL     + +A+  F +
Sbjct: 309 VTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEE 368

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                +IP++  + +L+DG C+       + L   M    I+PDV ++T+L+  +   G 
Sbjct: 369 MKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGR 428

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L +A   F ++L +G   +V TY+ +I+GL K       + +   ME  G  PD   +  
Sbjct: 429 LENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKT 488

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLE-----------------------PDIITYNTII 600
           ++  L ++   D A K+  ++  RGL+                       PD++TY T++
Sbjct: 489 IICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLM 548

Query: 601 CGYCSLNS 608
            GY  +N 
Sbjct: 549 DGYFLVNE 556



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 211/438 (48%), Gaps = 28/438 (6%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++G      ++NA ++   + Q G  PN+ T   ++  LC    +  A SLF+ +
Sbjct: 310 TYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM 369

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P++VT+++LI+  CK   LE+A  L   M E  + PD+  Y+IL+D L K GRL
Sbjct: 370 KYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRL 429

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +   E     L +G  L+V  ++ +++        G A+    +M   G +P+ I++  +
Sbjct: 430 ENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTI 489

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLE-----------------------PSLLTYSSLID 396
           I  L ++    +A  +  +++ R L+                       P ++TY +L+D
Sbjct: 490 ICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMD 549

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           G+    +L+    ++ +M + G+ P+    +++I+GL     + +A+  F +     + P
Sbjct: 550 GYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFP 609

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+  + +L+D  C+       + L   M  + I+PDV ++T+L+ G+   G L  A  +F
Sbjct: 610 NIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIF 669

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            ++L +G   +V  Y+A+I+ L K       L +   ME  G  PD   +++++  L ++
Sbjct: 670 QRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEK 729

Query: 572 CNLDAALKLFGQLTDRGL 589
              D A K+  ++  RGL
Sbjct: 730 DENDKAEKILXEMIARGL 747



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 198/416 (47%), Gaps = 40/416 (9%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A + FD +LL+ P P    F+ ++++            L+         PDL   +IL++
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
                  +     +L   L RG   + +  ++++      G++ +A+  +D+++  GF  
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 352 NVISYSILIKGLCQQGR-----------------------------------LVEACGLF 376
           N +SY  LI GLC+ G                                    L +AC L+
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            +++++ + P+++TY++L+ GFC  G L++ FSL + M  + + PD    + LI+ L   
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             M  A       ++  + P++  +N+L+DG   L +  +   +F  M    + P+V T+
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           T +I G+  +  +  A+ LF +M  + + PD++TY+++I GL K  ++   + + K M+ 
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKE 406

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            G+ PD+  Y +LL+ L K   L+ A + F +L  +G   ++ TYN +I G C  +
Sbjct: 407 QGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKAD 462



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 159/323 (49%), Gaps = 16/323 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++   + G+++ + E F  +   G +L+      +++ L  ++  G+   L   M 
Sbjct: 416 YTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKME 475

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           GKG       ++ ++  L  K   + A  + R++I RG    +    K+        ++ 
Sbjct: 476 GKGCMPDAITFKTIICALFEKDENDKAEKILREMIARG----LQEARKV--------RLK 523

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +  V+     KP+VVT+ TL++ +    +L+ A  ++  M +M + P++  Y+I+I
Sbjct: 524 EAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMI 583

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K   + E   L      + +  ++V ++S++DA      + RA+     M   G  
Sbjct: 584 DGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQ 643

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V SY+IL+ GLC+ GRL  A  +F ++L++    ++  Y+++I+  CK+G   +   L
Sbjct: 644 PDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDL 703

Query: 411 YDNMIKRGLKPDAVVCSLLINGL 433
              M  +G  PDAV   ++I  L
Sbjct: 704 QXKMEDKGCMPDAVTFDIIIWAL 726



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 84/170 (49%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  +++GL +K  ++ A  +  ++  +   PNIVT   ++  LC N  +  A +L   + 
Sbjct: 579 YTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMK 638

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G +P+V +++ L++  CK  +LE A +++  ++      ++ +Y+ +I+ L KAG   
Sbjct: 639 EHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFD 698

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           E  +L     D+G   D V F  ++ A     +  +A +    M+  G +
Sbjct: 699 EALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 83/174 (47%), Gaps = 8/174 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+   +   +DE++ +F  M    ++  P++V    L+  L  ++ + +   L + 
Sbjct: 579 YTIMIDGLCKKKTVDEAMSLFEEMKHKNMF--PNIVTYTSLIDALCKNHHLERAIALLKE 636

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G       Y  L++GL + G +E A  + ++++ +G+  N+     ++  LC  G 
Sbjct: 637 MKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGL 696

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
              A  L   +   G  P+ VTF  +I A  ++ + +KA ++   M+   L+ +
Sbjct: 697 FDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 251/528 (47%), Gaps = 19/528 (3%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           Q G+    FR  R    +F   Y  LI    + GK+D++ E+   M D GI     +   
Sbjct: 13  QHGQAVQLFREERCVPNEF--TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNG 70

Query: 153 LMSCLVDSNSVGQ---YYKLCRAMR-GKGFCVYEFLMNGLLRKGVIENAFHMHRQV-IQR 207
           ++  L  +   G    Y+K     +       +  L++ L++ G +E AF +   +    
Sbjct: 71  VIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSS 130

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
             +PN+VT   ++  LC +G++  A  L D++   G  PNV+T+S L+   CK  + +K 
Sbjct: 131 QCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKG 190

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           F L   M      PD+I+Y+ L++GL K+ RL E  EL+   +  G    VV ++S+M+ 
Sbjct: 191 FTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL 250

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +     V RA +    M   G  P+VI+Y+ +I GLC+  RL +A  L  Q++  R  P 
Sbjct: 251 FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310

Query: 388 LLTYSSLIDGFCK------SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GD 436
           ++TYS++IDG CK        KL     + + M + G  P+A   +++I GL        
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           AL    + +   ++P+L  F+ ++   C+        K+F +M     KP+ + +  LI 
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G++  G +  A+ + F+++     P V TY++++ GL     I   + M + M      P
Sbjct: 431 GLSKGGEVDKAVRV-FELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           D A Y  L+  L +   ++ A +LF  +  +G   ++  YN ++   C
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELC 537



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 235/468 (50%), Gaps = 24/468 (5%)

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
           LV +   GQ  +L R  R    CV     Y  L++GL + G ++ A+ +  ++  RG  P
Sbjct: 8   LVRAGQHGQAVQLFREER----CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPP 63

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
            +   N ++K LC  G+ G+A   F  +      P+++TF+ L++A  K  ++E+AFQ++
Sbjct: 64  GVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF 123

Query: 272 NLM-MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
             M      +P+++ Y+ +I+GL K G+L    ELL    + G   +V+ +S +++    
Sbjct: 124 ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCK 183

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLL 389
            G   +       M   GF P+VI Y+ L+ GLC+  RL EA  L  Q++IR    P+++
Sbjct: 184 AGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV-QLMIRSGCYPTVV 242

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           TY+SL++ FC+S ++   F L   M +RG  PD +  + +I GL     + DA     Q 
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKL------FMLMGMYNIKPDVITHTVLIRGI 498
           V    +P++  ++T++DG C+  R     KL        +M      P+  T+ V+I G+
Sbjct: 303 VAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGL 362

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                   A+ L  +M+   + PD+ ++S +I  L K  ++     +F +M      P+ 
Sbjct: 363 CRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNP 422

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             Y  L++ L K   +D A+++F +L      P + TYN+++ G C +
Sbjct: 423 VAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGV 469



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 197/459 (42%), Gaps = 78/459 (16%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSS-PNI---AQLIHVLLQSDMRDVASHVFDKM- 90
           N ++  L+K+     A Q F+  H      PN+     +I+ L +    D A  + D M 
Sbjct: 104 NILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMN 163

Query: 91  -------VIQF----------GKTYNFFRLFRD-SLGDFGCD---YSFLIENYVRIGKID 129
                  VI +          G+T   F L ++ +   F  D   Y+ L+    +  ++D
Sbjct: 164 ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLD 223

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLM 185
           E++E+   M   G Y +      LM     S  V + ++L + M  +G       Y  ++
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVI 283

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN------ASSLFDVL 239
            GL R   +++A  + +Q++    VP+++T + I+  LC + ++        A  + +++
Sbjct: 284 AGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMM 343

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL---------------- 283
              G  PN  T++ +I   C+  K ++A  L   M++ ++VPDL                
Sbjct: 344 KQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDL 403

Query: 284 -------------------IIYSILIDGLFKAGRLKEGN---ELLLTALDRGLKLDVVVF 321
                              + Y+ LIDGL K G + +     EL++ +   G    V  +
Sbjct: 404 DAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPG----VATY 459

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +SV+D   G+G +  AV+  + M++    P+  SY  LI+GLC+   + EA  LF  V  
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEA 519

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
           +     +  Y+ L++  CK  +L D   + + +I+ G K
Sbjct: 520 KGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 255/503 (50%), Gaps = 15/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+   +  +I++++ +  +M      L PD+     L++ +V    +    K+   
Sbjct: 154 YNILIKISCKKQQIEKAISLLDWMWSQN--LKPDVFSYGTLINGMVKVGDLLGALKVFDE 211

Query: 173 MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCING 227
           M  +G       Y  L++G  + G  +    +  ++++   V PN+VT N ++  LC  G
Sbjct: 212 MSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCG 271

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   +  +++ +     + ++ T+S+LI+  C+   ++ A ++Y  ++E  LV D + ++
Sbjct: 272 RFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHN 331

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +++G  +AG++KE  EL +       +  VV ++ ++      G V  A+  ++ +   
Sbjct: 332 AMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKK 390

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P   +Y +LI GLC+ GRL +A  +F +      +     YSS++DG CK G++ + 
Sbjct: 391 GCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEA 450

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            S+ + M KRG K D  VC+ LING      + DA+ FF +       P +  +NTL+ G
Sbjct: 451 ISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKG 510

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+ +R ++       M     KPD+IT ++L+ G+  +  +  A+ L+ Q L +G  PD
Sbjct: 511 LCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPD 570

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           +  Y+ ++HGL     +   L ++  M+R+   P++   N L+  L K  + + A +++ 
Sbjct: 571 ITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWD 630

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
            +   GL PDII+YN  I G CS
Sbjct: 631 CILKDGLHPDIISYNITIKGLCS 653



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 221/438 (50%), Gaps = 14/438 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMS------DMGIYLSPDLVQRLMSCLVDSNSVGQYYK 168
           Y+ +I    + G+ DES+EI+  M+      DM  Y S  L+  L        +V  Y +
Sbjct: 260 YNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSS--LIHGLCEAGNIDGAVRVYKE 317

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  +        +  ++NG  R G I+ +F +   V+ +     +V+ N ++K L  NG+
Sbjct: 318 IVESSLVVDAVTHNAMLNGFCRAGKIKESFELW-MVMGKENCQTVVSYNILIKGLFENGK 376

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A S++++L   G +P   T+  LI+  CK  +L KA +++    +     D   YS 
Sbjct: 377 VEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSS 436

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++DGL K GR+ E   ++     RG KLD  V + +++ +V    +  A+  +  M   G
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P ++SY+ LIKGLC+  R  EA     ++L +  +P ++T S L+DG C+  K+    
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+   + +G KPD  + ++L++GL     + DAL+ +    R T +PNL   NTLM+G 
Sbjct: 557 NLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            +++      +++  +    + PD+I++ + I+G+ S   +S AI      L RG+ P  
Sbjct: 617 YKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTA 676

Query: 524 ITYSAIIHGLFKGKNISV 541
           +T++ ++      +  SV
Sbjct: 677 VTWNILVRAAVNFRTSSV 694



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 244/501 (48%), Gaps = 32/501 (6%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM-SDM 141
           A  VFD+M +            R  + D  C Y+ LI+ + + G  D+  EI+  +  D 
Sbjct: 205 ALKVFDEMSV------------RGVVADVTC-YNMLIDGFFKHGDYDKGKEIWERLVKDC 251

Query: 142 GIYLSPDLV------QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIE 195
            +Y  P++V        L  C     S+  + ++ +  R K    Y  L++GL   G I+
Sbjct: 252 SVY--PNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNID 309

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK--PNVVTFST 253
            A  +++++++   V + VT N +L   C  G+I  +   F++ +++G +    VV+++ 
Sbjct: 310 GAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKES---FELWMVMGKENCQTVVSYNI 366

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI    +  K+E+A  ++ L+ +    P+   Y +LI GL K GRL +  ++   A D  
Sbjct: 367 LIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGP 426

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            KLD   +SS++D     G +  A+   ++M   G+  +    + LI G  +  +L +A 
Sbjct: 427 GKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAI 486

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             F ++  +   P++++Y++LI G CK+ +  + +S    M+++  KPD + CSLL++GL
Sbjct: 487 NFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGL 546

Query: 434 MGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
             +     AL  + Q++     P++ ++N LM G C + +  D ++L+  M      P++
Sbjct: 547 CQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNL 606

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T   L+ G+        A  ++  +LK GL PD+I+Y+  I GL     IS  +     
Sbjct: 607 VTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLND 666

Query: 549 MERNGVAPDIAIYNVLLNMLI 569
               G+ P    +N+L+   +
Sbjct: 667 ALNRGILPTAVTWNILVRAAV 687



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 222/470 (47%), Gaps = 40/470 (8%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           G   Y  L+N  +     + A    R        PN+ T N ++K  C   QI  A SL 
Sbjct: 115 GVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLL 174

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           D +     KP+V ++ TLIN   K   L  A ++++ M    +V D+  Y++LIDG FK 
Sbjct: 175 DWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKH 234

Query: 297 GRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           G   +G E+    + D  +  +VV ++ +++     G    +++ ++RM       ++ +
Sbjct: 235 GDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFT 294

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF------- 408
           YS LI GLC+ G +  A  ++ +++   L    +T++++++GFC++GK+++ F       
Sbjct: 295 YSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMG 354

Query: 409 ---------------------------SLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
                                      S+++ + K+G +P++    +LI+GL     +  
Sbjct: 355 KENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNK 414

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           AL+ F ++       + + +++++DG C+  R  + + +   M     K D      LI 
Sbjct: 415 ALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLIN 474

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G      L  AI  F +M  +G +P +++Y+ +I GL K +  S      K M      P
Sbjct: 475 GFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKP 534

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           D+   ++L++ L +E  ++ AL L+ Q  D+G +PDI  YN ++ G CS+
Sbjct: 535 DMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSV 584



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 192/397 (48%), Gaps = 32/397 (8%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P + + N +L       +   A S       +   PN+ T++ LI   CK+ ++EKA
Sbjct: 111 GCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKA 170

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L + M   +L PD+  Y  LI+G+ K G L    ++      RG+  DV  ++ ++D 
Sbjct: 171 ISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDG 230

Query: 328 YVGIGDVGRAVQTYDRMLNG-GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           +   GD  +  + ++R++      PNV++Y+I+I GLC+ GR  E+  ++ ++     E 
Sbjct: 231 FFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREK 290

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
            + TYSSLI G C++G +     +Y  +++  L  DAV                      
Sbjct: 291 DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVT--------------------- 329

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
                     N +++G CR  +  ++ +L+M+MG  N +  V+++ +LI+G+   G +  
Sbjct: 330 ---------HNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEE 379

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           AI ++  + K+G  P+  TY  +IHGL K   ++  L +FK  E      D   Y+ +++
Sbjct: 380 AISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVD 439

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            L KE  +D A+ +  Q+  RG + D    N +I G+
Sbjct: 440 GLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGF 476



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/430 (23%), Positives = 198/430 (46%), Gaps = 22/430 (5%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQ----SDMRDVASHV 86
           +F+++  I   + K         +    H    + NI   + V  +    S + D  +H 
Sbjct: 272 RFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTH- 330

Query: 87  FDKMVIQF---GKTYNFFRLFRDSLGDFGCD----YSFLIENYVRIGKIDESVEIFAYMS 139
            + M+  F   GK    F L+   +G   C     Y+ LI+     GK++E++ I+  + 
Sbjct: 331 -NAMLNGFCRAGKIKESFELWM-VMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLC 388

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR-AMRGKG---FCVYEFLMNGLLRKGVIE 195
             G          L+  L  +  + +  K+ + A  G G      Y  +++GL ++G ++
Sbjct: 389 KKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMD 448

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  +  Q+ +RG+  +   CN ++       ++ +A + F  +   G  P +V+++TLI
Sbjct: 449 EAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLI 508

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
              CK  +  +A+     M+E +  PD+I  S+L+DGL +  +++    L   ALD+G K
Sbjct: 509 KGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFK 568

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D+ +++ +M     +  +  A+Q Y  M     +PN+++ + L++GL +     +A  +
Sbjct: 569 PDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEI 628

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
           +  +L   L P +++Y+  I G C   ++ D     ++ + RG+ P AV  ++L+     
Sbjct: 629 WDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA--- 685

Query: 436 DALRFFFQSV 445
            A+ F   SV
Sbjct: 686 -AVNFRTSSV 694



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 140/290 (48%), Gaps = 7/290 (2%)

Query: 93  QFGKTYNFFRLFRDSLGDFGC-DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           +  K    F+   D  G      YS +++   + G++DE++ I   M   G  L P +  
Sbjct: 411 RLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCN 470

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L++  V ++ +       R M  KG       Y  L+ GL +      A+   ++++++
Sbjct: 471 PLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEK 530

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
            + P+++TC+ ++  LC   +I  A +L+   L  G KP++  ++ L++  C   KLE A
Sbjct: 531 EWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDA 590

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            QLY+ M     VP+L+  + L++GL+K    ++ +E+    L  GL  D++ ++  +  
Sbjct: 591 LQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKG 650

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC--QQGRLVEACGL 375
                 +  A++  +  LN G LP  ++++IL++     +   ++ ACG 
Sbjct: 651 LCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVNFRTSSVLSACGF 700



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 2/105 (1%)

Query: 500 SQGSLSSAILLFFQMLKR--GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           ++  +S+  L  FQ ++   G  P V +Y+ +++   +           +  E   V+P+
Sbjct: 91  AKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPN 150

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +  YN+L+ +  K+  ++ A+ L   +  + L+PD+ +Y T+I G
Sbjct: 151 LQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLING 195


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 251/528 (47%), Gaps = 19/528 (3%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           Q G+    FR  R    +F   Y  LI    + GK+D++ E+   M D GI     +   
Sbjct: 13  QHGQAVQLFREERCVPNEF--TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNG 70

Query: 153 LMSCLVDSNSVGQ---YYKLCRAMR-GKGFCVYEFLMNGLLRKGVIENAFHMHRQV-IQR 207
           ++  L  +   G    Y+K     +       +  L++ L++ G +E AF +   +    
Sbjct: 71  VIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSS 130

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
             +PN+VT   ++  LC +G++  A  L D++   G  PNV+T+S L+   CK  + +K 
Sbjct: 131 QCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKG 190

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           F L   M      PD+I+Y+ L++GL K+ RL E  EL+   +  G    VV ++S+M+ 
Sbjct: 191 FTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL 250

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +     V RA +    M   G  P+VI+Y+ +I GLC+  RL +A  L  Q++  R  P 
Sbjct: 251 FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310

Query: 388 LLTYSSLIDGFCK------SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GD 436
           ++TYS++IDG CK        KL     + + M + G  P+A   +++I GL        
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           AL    + +   ++P+L  F+ ++   C+        K+F +M     KP+ + +  LI 
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G++  G +  A+ + F+++     P V TY++++ GL     I   + M + M      P
Sbjct: 431 GLSKGGEVDKAVRV-FELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           D A Y  L+  L +   ++ A +LF  +  +G   ++  YN ++   C
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELC 537



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 235/468 (50%), Gaps = 24/468 (5%)

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
           LV +   GQ  +L R  R    CV     Y  L++GL + G ++ A+ +  ++  RG  P
Sbjct: 8   LVRAGQHGQAVQLFREER----CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPP 63

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
            +   N +++ LC  G+ G+A   F  +      P+++TF+ L++A  K  ++E+AFQ++
Sbjct: 64  GVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF 123

Query: 272 NLM-MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
             M      +P+++ Y+ +I+GL K G+L    ELL    + G   +V+ +S +++    
Sbjct: 124 ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCK 183

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLL 389
            G   +       M   GF P+VI Y+ L+ GLC+  RL EA  L  Q++IR    P+++
Sbjct: 184 AGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV-QLMIRSGCYPTVV 242

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           TY+SL++ FC+S ++   F L   M +RG  PD +  + +I GL     + DA     Q 
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKL------FMLMGMYNIKPDVITHTVLIRGI 498
           V    +P++  ++T++DG C+  R     KL        +M      P+  T+ V+I G+
Sbjct: 303 VAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGL 362

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                   A+ L  +M+   + PD+ ++S +I  L K  ++     +F +M      P+ 
Sbjct: 363 CRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNP 422

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             Y  L++ L K   +D A+++F +L      P + TYN+++ G C +
Sbjct: 423 VAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGV 469



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 197/459 (42%), Gaps = 78/459 (16%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSS-PNI---AQLIHVLLQSDMRDVASHVFDKM- 90
           N ++  L+K+     A Q F+  H      PN+     +I+ L +    D A  + D M 
Sbjct: 104 NILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMN 163

Query: 91  -------VIQF----------GKTYNFFRLFRD-SLGDFGCD---YSFLIENYVRIGKID 129
                  VI +          G+T   F L ++ +   F  D   Y+ L+    +  ++D
Sbjct: 164 ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLD 223

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLM 185
           E++E+   M   G Y +      LM     S  V + ++L + M  +G       Y  ++
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVI 283

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN------ASSLFDVL 239
            GL R   +++A  + +Q++    VP+++T + I+  LC + ++        A  + +++
Sbjct: 284 AGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMM 343

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL---------------- 283
              G  PN  T++ +I   C+  K ++A  L   M++ ++VPDL                
Sbjct: 344 KQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDL 403

Query: 284 -------------------IIYSILIDGLFKAGRLKEGN---ELLLTALDRGLKLDVVVF 321
                              + Y+ LIDGL K G + +     EL++ +   G    V  +
Sbjct: 404 DAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPG----VATY 459

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +SV+D   G+G +  AV+  + M++    P+  SY  LI+GLC+   + EA  LF  V  
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEA 519

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
           +     +  Y+ L++  CK  +L D   + + +I+ G K
Sbjct: 520 KGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 153/587 (26%), Positives = 278/587 (47%), Gaps = 38/587 (6%)

Query: 46  NNPTPAIQFFKWTHNCVSSPNIAQ-------LIHVLLQSDMRDVASHVFDKMVIQFGKTY 98
            +P  A++ F+W     S P   +       ++ +L Q+++   A  V ++++       
Sbjct: 93  TSPRMALRLFRWAE---SQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVI-----NA 144

Query: 99  NFFRLFRDSLGDFGCDYS--------FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL- 149
           N  R+    +G  GC  S         LI  Y +   +++ + +F  M  +   LSPD+ 
Sbjct: 145 NMHRIVDVLIG--GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKM--IKSRLSPDVK 200

Query: 150 -VQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
              R++  L D + + +  ++ R M   G       Y  L++   + G ++    +  ++
Sbjct: 201 NCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM 260

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
            +RG  PN VT N ++  L   G+   A  L   +L  G K +  T++ LI  +  +  L
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
            +A  L   M+     P +  Y+  I GL K GR+ +  + L   L   L  DVV ++++
Sbjct: 321 AEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 380

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +  Y  +G++ +A   +D + +    P +++Y+ L+ GLC+QG L  A  L  +++   +
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGDALRFFF 442
            P ++TY+ L++G CK G L      +D M+  GL+ D+   +  I G   +GD  R F 
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS 500

Query: 443 QSVRM---TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
               M      P+L I+N ++DG C+L    +  +L   M    + PD +T+T +I    
Sbjct: 501 LQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHL 560

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G L     +F++ML +GLTP V+TY+ +IHG      +      F  M+  G+ P++ 
Sbjct: 561 ENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVI 620

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            YN L+N L K   +D A   F ++ ++G+ P+  +Y  +I   C++
Sbjct: 621 TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNM 667



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 153/562 (27%), Positives = 272/562 (48%), Gaps = 44/562 (7%)

Query: 61  CVSSPNIAQLIHVLL----QSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS 116
           CVSS    +++ +L+    +  M +    VFDKM+          RL  D          
Sbjct: 157 CVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKS--------RLSPD---------- 198

Query: 117 FLIENYVRIGKI-------DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
             ++N  RI +I        ++VE++  M + GI  +      L+        V Q   L
Sbjct: 199 --VKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDL 256

Query: 170 CRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
              M+ +G       Y  L+NGL +KG  E A  +  ++++ G   +  T N ++     
Sbjct: 257 LSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFN 316

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            G +  A SL + ++L G  P V T+++ I   CK  ++  A Q  + M+  +L+PD++ 
Sbjct: 317 KGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVS 376

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKL--DVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           Y+ LI G  + G L +    LL    R + L   +V +++++D     G++  A Q    
Sbjct: 377 YNTLIYGYCRLGNLMKA--FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVE 434

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+N G  P++++Y+IL+ G C+ G L  A   F ++L   LE     Y++ I G  K G 
Sbjct: 435 MINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGD 494

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
               FSL + M+ +G  PD ++ +++++GL     + +A     + V   +IP+   + +
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++       R     ++F  M    + P V+T+TVLI G A +G L  A + F +M ++G
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKG 614

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           + P+VITY+++I+GL K + +    + F  M   G+ P+   Y +L+N      N   AL
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674

Query: 579 KLFGQLTDRGLEPDIITYNTII 600
            L+ Q+ DRG++PD  T++ ++
Sbjct: 675 SLYKQMLDRGVQPDSCTHSALL 696



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 199/450 (44%), Gaps = 75/450 (16%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLI----HVLLQSDMRDVASH- 85
           +F QA  ++  ++KT     A  +    +   +   +A+ +     ++L+     VA++ 
Sbjct: 284 EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYN 343

Query: 86  VFDKMVIQFGKTYNFFRLFRDSLGDF----GCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
            F   + + G+  +  +   D L +        Y+ LI  Y R+G + ++  +F  +   
Sbjct: 344 SFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR-- 401

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMH 201
            IYL P +V                              Y  L++GL R+G +E A  + 
Sbjct: 402 SIYLFPTIV-----------------------------TYNTLLDGLCRQGELEVAQQLK 432

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK---------------- 245
            ++I  G  P+IVT   ++   C  G +  A   FD +L  G +                
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492

Query: 246 -------------------PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
                              P+++ ++ +++  CK   LE+A +L   M+   ++PD + Y
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + +I    + GRL++G E+    L +GL   VV ++ ++  + G G + RA   +  M  
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G LPNVI+Y+ LI GLC+  R+ +A   F +++ + + P+  +Y+ LI+  C  G  ++
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
             SLY  M+ RG++PD+   S L+  L  D
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 150/297 (50%), Gaps = 8/297 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM----SCLVDSNSVGQYYKLC 170
           Y+ L++   R G+++ + ++   M + GI  +PD+V   +    SC + S S+ Q +   
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGI--APDIVTYTILVNGSCKMGSLSMAQEFFDE 469

Query: 171 RAMRGKGFCVYEFLMN--GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
               G     Y +     G L+ G    AF +  +++ +GF P+++  N ++  LC  G 
Sbjct: 470 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGN 529

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  AS L   ++  G  P+ VT++++I+A  +  +L K  +++  M+   L P ++ Y++
Sbjct: 530 LEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTV 589

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G    GRL+          ++G+  +V+ ++S+++    +  + +A   +  M+  G
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG 649

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             PN  SY+ILI   C  G   EA  L+ Q+L R ++P   T+S+L+    K  KL+
Sbjct: 650 IFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 8/166 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  ++  G++ +  EIF  M   G  L+P +V    L+        + + +     
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKG--LTPSVVTYTVLIHGHAGKGRLERAFIYFSE 609

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ KG       Y  L+NGL +   ++ A++   +++++G  PN  +   ++   C  G 
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGN 669

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
              A SL+  +L  G +P+  T S L+    K+ KL+   QL +L+
Sbjct: 670 WQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 234/455 (51%), Gaps = 9/455 (1%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G DY  ++ N +R  K+D+S+++F +M       S     RL+S +           L  
Sbjct: 46  GSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWE 105

Query: 172 AMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M+  G     C    L+N   R   +  A     ++++ G  P+IVT   +L   C   
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGD 165

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +I +A  +FD ++ +G +PNVV ++T+I+  CK  +++ A  L N M    + PD + Y+
Sbjct: 166 RIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYN 225

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL  +GR  +   ++     R +  DV  F++++DA V  G +  A + Y+ M+  
Sbjct: 226 SLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRR 285

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              P++++YS+LI GLC   RL EA  +FG ++ +   P ++TYS LI+G+CKS K+  G
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+  M +RG+  + V  ++LI G      +  A   F   V   + PN+  +N L+ G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHG 405

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C   +    + +   M    +  D++T+ ++IRG+   G ++ A  L+  +  +GLTPD
Sbjct: 406 LCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPD 465

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           + TY+A++ GL+K         +F+ M+ +G+ P+
Sbjct: 466 IWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 225/426 (52%), Gaps = 6/426 (1%)

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           E L NG+ R   ++++  +   ++Q   +P+I   +++L  +    +      L++ + +
Sbjct: 51  EMLRNGI-RYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQM 109

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G   N+ T + L+N FC+ ++L  A      MM++   PD++ +  L++G  +  R+ +
Sbjct: 110 LGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYD 169

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              +    ++ G + +VV++++++D       V  A+   +RM   G  P+ ++Y+ LI 
Sbjct: 170 ALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLIS 229

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GLC  GR  +A  +   +  R + P + T+++LID   K G++ +   LY+ MI+R L P
Sbjct: 230 GLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDP 289

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D V  SLLI GL     + +A + F   V     P++  ++ L++G C+ K+    +KLF
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    +  + +T+TVLI+G    G L+ A  +F  M+  G+ P++ITY+ ++HGL   
Sbjct: 350 CEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDN 409

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             I   L +   M+++G+  DI  YN+++  + K   +  A  L+  L  +GL PDI TY
Sbjct: 410 GKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTY 469

Query: 597 NTIICG 602
             ++ G
Sbjct: 470 TAMMLG 475



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 197/382 (51%), Gaps = 5/382 (1%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ ++  LF  ++   P P++  FS L++A  K  K +    L+  M  + +  +L   +
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           IL++   +  +L      L   +  G + D+V F S+++ +     +  A+  +DRM+  
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G+ PNV+ Y+ +I GLC+  ++  A  L  ++ +  + P  +TY+SLI G C SG+  D 
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             +   M KR + PD    + LI+     G + +A   + + +R +L P++  ++ L+ G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYG 300

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C   R  +  ++F  M      PDV+T+++LI G      +   + LF +M +RG+  +
Sbjct: 301 LCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +TY+ +I G  +   ++V   +FK M   GV P+I  YNVLL+ L     ++ AL +  
Sbjct: 361 TVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
            +   G++ DI+TYN II G C
Sbjct: 421 DMQKSGMDADIVTYNIIIRGMC 442



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 10/211 (4%)

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           I G C S +   G S Y  M++ G++             + D+L  FF  V+   +P++ 
Sbjct: 33  ICGLCFSRRAYSGGSDYREMLRNGIRYMK----------LDDSLDLFFHMVQCRPLPSIA 82

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            F+ L+    ++K+    + L+  M M  I  ++ T  +L+        LS A+    +M
Sbjct: 83  DFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM 142

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           +K G  PD++T+ ++++G  +G  I   L+MF  M   G  P++ IYN +++ L K   +
Sbjct: 143 MKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQV 202

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           D AL L  ++   G+ PD +TYN++I G C+
Sbjct: 203 DNALDLLNRMEVDGIRPDAVTYNSLISGLCN 233



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 31/253 (12%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           +  + R SL      YS LI       ++DE+ ++F +M   G +  PD+V         
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCF--PDVV--------- 327

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
                                Y  L+NG  +   +E+   +  ++ QRG V N VT   +
Sbjct: 328 --------------------TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVL 367

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           ++  C  G++  A  +F  ++  G  PN++T++ L++  C   K+EKA  +   M +  +
Sbjct: 368 IQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGM 427

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
             D++ Y+I+I G+ KAG + +  +L  +   +GL  D+  ++++M      G  G A  
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADA 487

Query: 340 TYDRMLNGGFLPN 352
            + +M   G LPN
Sbjct: 488 LFRKMKEDGILPN 500


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/561 (24%), Positives = 258/561 (45%), Gaps = 76/561 (13%)

Query: 52  IQFFKWTHN----CVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDS 107
           ++FF+W+              +++H+L  S          DK+V    + +    +F   
Sbjct: 62  LRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKN--EKHTVSSVFHSL 119

Query: 108 L--GDFGCDYSFLIE----NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           L  GD  C  + + +     YV   +I  + E+F  + D G  LS +    L+S LV  N
Sbjct: 120 LLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGN 179

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
             G+                                 ++++++I+R   PN+ T N  + 
Sbjct: 180 ETGEMQ-------------------------------YVYKEMIKRRIQPNLTTFNIFIN 208

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---D 278
            LC  G++  A  + + +   G  PN+VT++TLI+  CK+    K ++   ++ EM    
Sbjct: 209 GLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK 268

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           + P+ I ++ LIDG  K   +            +GLK ++V ++S+++     G +  A+
Sbjct: 269 ICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAI 328

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             +D+M+  G  PN+++++ LI G C++  + EA  LF  +  + L P+ +T++++ID F
Sbjct: 329 ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAF 388

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNT 458
           CK+G + +GF+L+++M+  G+                               PN+  +N 
Sbjct: 389 CKAGMMEEGFALHNSMLDEGI------------------------------FPNVSTYNC 418

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+ G CR +      KL   M  Y +K DV+T+ +LI G    G  S A  L  +ML  G
Sbjct: 419 LIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVG 478

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           + P+ +TY+ ++ G     N+   L +   ME+ G   ++  YNVL+    K   L+ A 
Sbjct: 479 VKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDAN 538

Query: 579 KLFGQLTDRGLEPDIITYNTI 599
           +L  ++ ++GL P+  TY+ +
Sbjct: 539 RLLNEMLEKGLNPNRTTYDVV 559



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 200/387 (51%), Gaps = 8/387 (2%)

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           N +I +A  +F  +   G K ++ + + L++A  K  +  +   +Y  M++  + P+L  
Sbjct: 143 NLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTT 202

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG---RAVQTYD 342
           ++I I+GL KAG+L +  +++      G   ++V +++++D +   G  G   RA     
Sbjct: 203 FNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILK 262

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            ML     PN I+++ LI G C+   ++ A   F ++  + L+P+++TY+SLI+G   +G
Sbjct: 263 EMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNG 322

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFN 457
           KL +  +L+D M+  GLKP+ V  + LING     ++ +A + F       L+PN   FN
Sbjct: 323 KLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFN 382

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           T++D  C+     +   L   M    I P+V T+  LI G+    ++ +A  L  +M   
Sbjct: 383 TMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENY 442

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            L  DV+TY+ +I G  K    S    +   M   GV P+   YN L++    E NL AA
Sbjct: 443 ELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAA 502

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
           LK+  Q+   G   +++TYN +I G+C
Sbjct: 503 LKVRTQMEKEGKRANVVTYNVLIKGFC 529



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 196/382 (51%), Gaps = 10/382 (2%)

Query: 233 SSLFDVLLLVGPKP--NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           SS+F  LLL G +P  N +    L+ A+    ++  A +++  + +      L   + L+
Sbjct: 113 SSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLL 172

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K     E   +    + R ++ ++  F+  ++     G + +A    + +   GF 
Sbjct: 173 SALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFS 232

Query: 351 PNVISYSILIKGLCQQG---RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           PN+++Y+ LI G C++G   ++  A  +  ++L  ++ P+ +T+++LIDGFCK   +   
Sbjct: 233 PNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAA 292

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            + ++ M ++GLKP+ V  + LINGL     + +A+  + + V + L PN+  FN L++G
Sbjct: 293 KNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALING 352

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+ K   +  KLF  +   ++ P+ IT   +I      G +     L   ML  G+ P+
Sbjct: 353 FCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPN 412

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TY+ +I GL + +N+     +   ME   +  D+  YN+L+    K+     A KL G
Sbjct: 413 VSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLG 472

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
           ++ + G++P+ +TYNT++ GYC
Sbjct: 473 EMLNVGVKPNHVTYNTLMDGYC 494



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 186/373 (49%), Gaps = 55/373 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN----SVGQYYK-- 168
           ++  I    + GK++++ ++   +   G   SP++V    + L+D +    S G+ Y+  
Sbjct: 203 FNIFINGLCKAGKLNKAEDVIEDIKAWG--FSPNIVT--YNTLIDGHCKKGSAGKMYRAD 258

Query: 169 -LCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
            + + M     C  E     L++G  +   +  A +   ++ ++G  PNIVT N ++  L
Sbjct: 259 AILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGL 318

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
             NG++  A +L+D ++ +G KPN+VTF+ LIN FCK+  +++A +L++ + E DLVP+ 
Sbjct: 319 SNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNA 378

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRG------------------------------ 313
           I ++ +ID   KAG ++EG  L  + LD G                              
Sbjct: 379 ITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNE 438

Query: 314 -----LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
                LK DVV ++ ++  +   G+  +A +    MLN G  PN ++Y+ L+ G C +G 
Sbjct: 439 MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGN 498

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-----DA 423
           L  A  +  Q+       +++TY+ LI GFCK+GKL D   L + M+++GL P     D 
Sbjct: 499 LKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDV 558

Query: 424 VVCSLLINGLMGD 436
           V   +L  G + D
Sbjct: 559 VRLEMLEKGFIPD 571



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 66/143 (46%)

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           K    +V   +L+G      + +   +L+    +   + SA  +F ++   G    + + 
Sbjct: 109 KHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSC 168

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + ++  L KG       +++K M +  + P++  +N+ +N L K   L+ A  +   +  
Sbjct: 169 NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228

Query: 587 RGLEPDIITYNTIICGYCSLNSC 609
            G  P+I+TYNT+I G+C   S 
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSA 251


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 244/481 (50%), Gaps = 9/481 (1%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEF 183
           ID++V +F  +  M    S      ++  +V          L + M  +G          
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N     G +  AF +   V++RG+  N +T   I+K LCING++  A    D ++  G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
              + VT+ TLIN  CK     +AF+L + M    + P+++IY++++DGL K G + E  
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L    + RG+  DV  ++ ++  + G+G      +    M++     NV +Y+ILI  L
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G L +A  +   ++ R   P L+T+++L+ G+C    + +   L+D   + G+ PD 
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 424 VVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              ++LI     N  + +AL  F +     L PN+  +++L+DG C+  R +   +LF  
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +      P+VIT+ +++  +     +  AI LF  M +RGLTP+V +Y+ +I+G  K K 
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           I   +++F+ M R  + PD   YN L++ L K   +  A +LF  + D G   D+ITYN 
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538

Query: 599 I 599
           +
Sbjct: 539 L 539



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 226/429 (52%), Gaps = 5/429 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +  ++  +++      A  + +Q+  RG  P+IVT + ++   C  G +G A S+  ++L
Sbjct: 81  FNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVL 140

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G + N +T +T++   C   ++ KA + ++ ++    + D + Y  LI+GL K G  +
Sbjct: 141 KRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTR 200

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  ELL     + ++ +VV+++ ++D     G V  A   Y  ++  G  P+V +Y+ LI
Sbjct: 201 EAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLI 260

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C  G+  E   L   ++ R +  ++ TY+ LID  CK G L     + + MI+RG +
Sbjct: 261 HGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQR 320

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V  + L++G      + +A + F       + P+++ +N L+ G C+  R  + + L
Sbjct: 321 PDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSL 380

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M    + P+++T++ LI G+   G +S A  LF  +   G +P+VITY+ ++  L K
Sbjct: 381 FNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCK 440

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            + +   + +F LM   G+ P+++ YN+L+N   K   +D A+ LF ++  R L PD +T
Sbjct: 441 IQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVT 500

Query: 596 YNTIICGYC 604
           YN +I G C
Sbjct: 501 YNCLIDGLC 509



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 215/417 (51%), Gaps = 5/417 (1%)

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            I++A  +  ++I    +P++V  N IL  +        A SL   + L G  P++VT S
Sbjct: 58  AIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLS 117

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
            LIN +C    +  AF +  ++++     + I  + ++ GL   G +++  E   + + +
Sbjct: 118 ILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQ 177

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G  LD V + ++++    IG    A +   +M      PNV+ Y++++ GLC+ G + EA
Sbjct: 178 GFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEA 237

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             L+  V+ R ++P + TY+ LI GFC  G+ R+   L  +M+ R +  +    ++LI+ 
Sbjct: 238 RDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDA 297

Query: 433 LMGDALRFFFQSVRMTLI-----PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           L    +      +R  +I     P+L  FNTLM G C      +  KLF       I PD
Sbjct: 298 LCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPD 357

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           V ++ +LI G      +  A+ LF +M  + L P+++TYS++I GL K   IS    +F 
Sbjct: 358 VWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFS 417

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +   G +P++  YN++L+ L K   +D A++LF  + +RGL P++ +YN +I GYC
Sbjct: 418 AIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYC 474



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 224/433 (51%), Gaps = 9/433 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S LI  Y  +G +  +  +   +   G  L+   +  +M  L  +  V +  +   ++  
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVA 176

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF      Y  L+NGL + G+   AF +  ++  +   PN+V  N I+  LC +G +  
Sbjct: 177 QGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTE 236

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L+  ++  G  P+V T++ LI+ FC   +  +  +L   M++ ++  ++  Y+ILID
Sbjct: 237 ARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILID 296

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G L + +++    ++RG + D+V F+++M  Y    DV  A + +D     G  P
Sbjct: 297 ALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITP 356

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V SY+ILI G C+  R+ EA  LF ++  ++L P+++TYSSLIDG CKSG++   + L+
Sbjct: 357 DVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELF 416

Query: 412 DNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             +   G  P+ +  +++++      L+  A+  F       L PN+  +N L++G C+ 
Sbjct: 417 SAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKS 476

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           KR  + + LF  M   N+ PD +T+  LI G+   G +S A  LF  M   G   DVITY
Sbjct: 477 KRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITY 536

Query: 527 SAIIHGLFKGKNI 539
           + +     K +++
Sbjct: 537 NILFDAFSKIQHV 549



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 177/327 (54%), Gaps = 12/327 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQYYKLCRAM 173
           Y+ +++   + G + E+ ++++ +   GI   PD+     +CL+     +GQ+ ++ R +
Sbjct: 221 YNMIVDGLCKDGLVTEARDLYSDVVGRGI--DPDVFT--YTCLIHGFCGLGQWREVTRLL 276

Query: 174 -----RGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
                R     VY +  L++ L +KG++  A  M   +I+RG  P++VT N ++   C+ 
Sbjct: 277 CDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLY 336

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
             +  A  LFD     G  P+V +++ LI  +CK  ++++A  L+N M    L P+++ Y
Sbjct: 337 NDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTY 396

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           S LIDGL K+GR+    EL     D G   +V+ ++ ++DA   I  V +A++ ++ M  
Sbjct: 397 SSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFE 456

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PNV SY+ILI G C+  R+ EA  LF ++  R L P  +TY+ LIDG CKSG++  
Sbjct: 457 RGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISH 516

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL 433
            + L++ M   G   D +  ++L +  
Sbjct: 517 AWELFNVMHDGGPPVDVITYNILFDAF 543



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 141/295 (47%), Gaps = 5/295 (1%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           VV F+ ++ + V +     A+    +M   G  P++++ SILI   C  G +  A  + G
Sbjct: 78  VVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLG 137

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
            VL R  + + +T ++++ G C +G++R     +D+++ +G   D V    LINGL    
Sbjct: 138 MVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIG 197

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
              +A     +     + PN+ I+N ++DG C+    T+   L+  +    I PDV T+T
Sbjct: 198 LTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYT 257

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G    G       L   M+ R +  +V TY+ +I  L K   +     M  LM   
Sbjct: 258 CLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIER 317

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           G  PD+  +N L++      ++  A KLF    + G+ PD+ +YN +I GYC  N
Sbjct: 318 GQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNN 372



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 152/284 (53%), Gaps = 7/284 (2%)

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
           G   +  AV  + R++    LP+V+ +++++  + +      A  L  Q+ +R + PS++
Sbjct: 55  GFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIV 114

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS-----LLINGLMGDALRFFFQS 444
           T S LI+ +C  G +   FS+   ++KRG + +A+  +     L ING +  AL F    
Sbjct: 115 TLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSV 174

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           V    + +   + TL++G C++    +  +L   M    ++P+V+ + +++ G+   G +
Sbjct: 175 VAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLV 234

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNV 563
           + A  L+  ++ RG+ PDV TY+ +IHG    G+   V   +  +++RN V  ++  YN+
Sbjct: 235 TEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN-VNLNVYTYNI 293

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++ L K+  L  A  +   + +RG  PD++T+NT++ GYC  N
Sbjct: 294 LIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYN 337


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 250/506 (49%), Gaps = 40/506 (7%)

Query: 93  QFGKTYNFFRL-----FRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + GK     RL     FR S  D    YS +I+ Y  +G++ +++++   M   G+  + 
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTPDV-VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNR 328

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQ 203
                ++  L       +  K+ R M  +       VY  L++G  + G +  A     +
Sbjct: 329 YTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDE 388

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           ++ +   P+ +T   +++     G++    +LF  ++  G KP+ VT++TLI+ +CK  +
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +  AF L+N M++M + P+++ Y  LIDGL K G L   NELL     +GL+L+V +++S
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           +++     G++ +A++    M   G  P+ I+Y+ +I   C+ G + +A  L  ++L R 
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQ 443
           L+P+++T++ L++GFC  G L DG  L   M+++G+ PDA+                   
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT------------------ 610

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                       +NTLM   C       T K++  M    + PD  T+ +LI+G     +
Sbjct: 611 ------------YNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L  A  L+ +M+++G  P V +Y+A+I   +K +       +F+ M  +G+  D  IYN 
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNF 718

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGL 589
            ++M  +E +++  L L  +  ++ L
Sbjct: 719 FVDMCYEEGDVEITLNLCDEAIEKCL 744



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 154/602 (25%), Positives = 282/602 (46%), Gaps = 35/602 (5%)

Query: 24  KTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHV-LLQSDM 79
           K H S+ +++    +L N+   N+    + FF W       P++     +IH+ ++ +D+
Sbjct: 94  KAHESNFRYDHLIWVLMNI--KNDYNLVLAFFDWAR-VRREPSLEARCIIIHIAVVSNDL 150

Query: 80  RDVASHVFD-----KMVIQFGKTYNFFRLFR--DSLGDFGCDYSFLIENYVRIGKIDESV 132
           R     V D     K+ I    T    RL       G     +    +  V IG + E+ 
Sbjct: 151 RLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEAR 210

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMN------ 186
           ++   +   G+ ++ D     +S + + NS G        M  K FC Y    N      
Sbjct: 211 KLLDKLLSYGLVVTVDSCNAFLSRIAN-NSEGI------EMAIKVFCEYGISWNTTSYNI 263

Query: 187 ---GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
               L R G ++ A  +  Q+  R   P++V+ + ++   C  G++  A  L D + + G
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            KPN  T++++I   CK  K  +A ++   MM   ++PD ++Y+ LI G FK G ++  N
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +     L + +  D + +++++  +   G V      +  M++ G  P+ ++Y+ LI   
Sbjct: 384 KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+ G +V A  L  +++   + P+++TY +LIDG CK G+L     L D M K+GL+ + 
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNV 503

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            + + ++NG+     +  A++   +     + P+   + T++D  CRL       KL   
Sbjct: 504 CIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    ++P V+T  VL+ G    G L     L   ML++G+ PD ITY+ ++       +
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           ++    ++K M   GVAPD   YN+L+    K  NL  A  L+ ++ ++G  P + +YN 
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683

Query: 599 II 600
           +I
Sbjct: 684 LI 685



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 219/442 (49%), Gaps = 13/442 (2%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G     ++     L+  G +  A  +  +++  G V  + +CN  L R+  N +      
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE--GIEM 244

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL---VPDLIIYSILID 291
              V    G   N  +++ +I + C+  K+++A   + L+M+MD     PD++ YS +ID
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEA---HRLLMQMDFRSSTPDVVSYSTVID 301

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G    G LK+  +L+     +GLK +   ++S++     IG    A +    M++   +P
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           + + Y+ LI G  + G +  A   F ++L +++ P  +TY++LI GF + GK+ +  +L+
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421

Query: 412 DNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             MI RGLKPD V  + LI+     G M +A     + V+M + PN+  +  L+DG C+ 
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                  +L   M    ++ +V  +  ++ GI   G++  AI L  +M   G+ PD ITY
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I    +  +I     + + M   G+ P +  +NVL+N       L+   +L G + +
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 587 RGLEPDIITYNTIICGYCSLNS 608
           +G+ PD ITYNT++  +C  NS
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNS 623



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 221/434 (50%), Gaps = 11/434 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASSLFDV 238
           V+++ +N  L  GV    F  HR +    +  PN +  +   + L   G +  A  L D 
Sbjct: 157 VHDYFLNSKLEIGVKMTQF-THRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDK 215

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAK-LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
           LL  G    V + +  ++     ++ +E A +++    E  +  +   Y+I+I  L + G
Sbjct: 216 LLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF---CEYGISWNTTSYNIIIYSLCRLG 272

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           ++KE + LL+    R    DVV +S+V+D Y  +G++ +A++  D M   G  PN  +Y+
Sbjct: 273 KVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYN 332

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I  LC+ G+  EA  +  +++ +++ P  + Y++LI GF K G +R     +D M+ +
Sbjct: 333 SIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSK 392

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            + PD +  + LI G      + +    F + +   L P+   + TL+D  C+     + 
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             L   M    + P+++T+  LI G+   G L +A  L  +M K+GL  +V  Y+++++G
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           + K  NI   + + K ME  G+ PD   Y  +++   +  ++D A KL  ++ DRGL+P 
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572

Query: 593 IITYNTIICGYCSL 606
           ++T+N ++ G+C L
Sbjct: 573 VVTFNVLMNGFCML 586


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 265/526 (50%), Gaps = 51/526 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++  ++ G++DE++ I   M + G   +      ++  L  +  V +  ++   M 
Sbjct: 114 YTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML 173

Query: 175 GKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQ----RGFVPNIVTCNKILKRLCI 225
           G G C     VY  L++GL + G ++ A     Q+++    RG  P++V  N ++++LC 
Sbjct: 174 GNG-CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCA 232

Query: 226 NGQIGNASSLFDVL-----------------LLVGPK-----------------PNVVTF 251
           +G + +A + FD L                 L    +                 P + T+
Sbjct: 233 SGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTY 292

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           ++L++ F K  +L++A       +E   +PD + Y+ +IDGL K GR++EG E      +
Sbjct: 293 TSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRN 352

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           RG + D V +++++D ++    + +A + Y +ML  G + + ++Y+I++ GLC+ GR+ E
Sbjct: 353 RGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAE 412

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A   F  +  R    +++TYS+L+DGFC  G +     L+  M+ RG +P+ V  +++I 
Sbjct: 413 AYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIR 472

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC-RLKRATDTVKLFMLMGMYNIK 485
           GL     +  A  +F + ++  L P+++ FN+ + G C RL    D V+LF  M      
Sbjct: 473 GLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTS 532

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P++ ++++L+ GI   G L   + +F +M+ RG+ PDV+ ++ +I  L     +   L +
Sbjct: 533 PNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEV 592

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           F+ +ER   APD   Y  LL+ L +   ++ A  L   +  +G  P
Sbjct: 593 FRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 268/540 (49%), Gaps = 52/540 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           ++ +I    R  ++DE+  +       G    PD V     +  L  +  V   ++L + 
Sbjct: 44  FTVVINGLCREKRLDEAFSVLERAVRAGC--EPDYVTYNVFIDGLCKAERVDDAFQLLKK 101

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  K        Y  L++GLL+ G ++ A  +  Q++++G  P + T   ++  L   G+
Sbjct: 102 MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGR 161

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME----MDLVPDLI 284
           +  A  +F  +L  G +P+   ++ LI+   K  KL++A    N M+E      + PD++
Sbjct: 162 VEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVV 221

Query: 285 IYSILIDGLFKAGRLKEG----NEL-------------LLTALDRGLKLDVVV------- 320
           I++++I  L  +G L++     +EL             L+ AL +  + +  +       
Sbjct: 222 IHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMS 281

Query: 321 ----------FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
                     ++S++D ++ +G +  A+      +  GF+P+ ++Y+ +I GLC+ GR+ 
Sbjct: 282 ERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVE 341

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           E C  F ++  R  EP  +TY++LIDGF K+  +     +Y  M++ G     V  ++++
Sbjct: 342 EGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIIL 401

Query: 431 NGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           +GL     + +A   F        +  +  ++ LMDG C     +  V+LF  M     +
Sbjct: 402 DGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE 461

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG-KNISVGLH 544
           P+++++ ++IRG+   G L+ A   F ++L+R L PDV T+++ +HGL +    +  G+ 
Sbjct: 462 PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVE 521

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +F+ M   G +P++  Y++L++ + +   L+  L++F ++  RG+ PD++ +NT+I   C
Sbjct: 522 LFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLC 581



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 224/445 (50%), Gaps = 11/445 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  ++NGL R+  ++ AF +  + ++ G  P+ VT N  +  LC   ++ +A  L   +
Sbjct: 43  AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM 102

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P  VT++ L++   K  +L++A  +   M+E    P L  Y+++IDGL KAGR+
Sbjct: 103 DEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRV 162

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML-NG---GFLPNVIS 355
           +E   + +  L  G + D  V+++++     IG +  A+   ++M+ NG   G  P+V+ 
Sbjct: 163 EEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVI 222

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           ++++I+ LC  G L +A   F + L   L+ +  T++ L+   CK+ +  +  +    M 
Sbjct: 223 HNLVIRQLCASGNLEDALAYFDE-LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMS 281

Query: 416 KRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +R   P     + L++G +      +AL    ++V    IP+   + +++DG C+L R  
Sbjct: 282 ERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVE 341

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  + F  M     +PD +T+  LI G      +  A  ++ QML+ G     +TY+ I+
Sbjct: 342 EGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIIL 401

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL K   ++     F  ME  G    +  Y+ L++    E N+ AA++LF ++ DRG E
Sbjct: 402 DGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE 461

Query: 591 PDIITYNTIICGYCSLNSCLIDGYF 615
           P++++YN II G C     L   YF
Sbjct: 462 PNLVSYNIIIRGLCRAGK-LAKAYF 485



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 156/590 (26%), Positives = 265/590 (44%), Gaps = 101/590 (17%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMV- 91
           N  +  L K      A Q  K        P       L+  LL++   D A  + ++MV 
Sbjct: 80  NVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVE 139

Query: 92  -----------------IQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKID 129
                             + G+     R+F D LG+ GC      Y+ LI    +IGK+D
Sbjct: 140 KGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGN-GCRPDAFVYTALISGLAKIGKLD 198

Query: 130 ESVEIFAYMSDMGIY--LSPDLV------QRLMSC------------LVDSNSVGQYY-- 167
           E++     M + G    + PD+V      ++L +             L DS  +  +   
Sbjct: 199 EALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFN 258

Query: 168 ----KLCRAMRGK----------------GFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
                LC+A R +                    Y  L++G L+ G ++ A    ++ ++R
Sbjct: 259 PLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVER 318

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           GF+P+ VT   I+  LC  G++      F  +   G +P+ VT++ LI+ F K   + KA
Sbjct: 319 GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKA 378

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            ++Y  M++   V   + Y+I++DGL KAGR+ E     L   +RG    VV +S++MD 
Sbjct: 379 HRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDG 438

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +   G+V  AV+ + RML+ G  PN++SY+I+I+GLC+ G+L +A   F ++L RRL P 
Sbjct: 439 FCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPD 498

Query: 388 LLTYSSLIDGFCKS-GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
           + T++S + G C+    + DG  L+++M+ +G                            
Sbjct: 499 VYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTS-------------------------- 532

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
               PNL  ++ LMDG CR      T+++F  M    + PDV+    LIR +   G +  
Sbjct: 533 ----PNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDE 588

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           A+ +F ++ +R   PD  +Y +++  L + + +     +   M+  G AP
Sbjct: 589 ALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 204/410 (49%), Gaps = 14/410 (3%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +I R  V   V C  +L  LC  GQ+  A  L D +      P++V F+ +IN  C+E +
Sbjct: 1   MIDRKLVDTRV-CTALLNGLCKTGQLDRAMLLLDEMPC---SPDMVAFTVVINGLCREKR 56

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L++AF +    +     PD + Y++ IDGL KA R+ +  +LL    ++      V +++
Sbjct: 57  LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D  +  G +  A+   ++M+  G  P + +Y+++I GL + GR+ EA  +F  +L   
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK----RGLKPDAVVCSLLI-----NGLM 434
             P    Y++LI G  K GKL +     + M++    RG++PD V+ +L+I     +G +
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNL 236

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            DAL  +F  +  +L    F FN L+   C+ +R  + +     M      P + T+T L
Sbjct: 237 EDALA-YFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSL 295

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           + G    G L  A+L   + ++RG  PD +TY++II GL K   +  G   F  M   G 
Sbjct: 296 VDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGY 355

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            PD   Y  L++  +K   +  A +++ Q+   G     +TYN I+ G C
Sbjct: 356 EPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 405


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 256/514 (49%), Gaps = 21/514 (4%)

Query: 105 RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYL-SPDLVQRLMSCLVDSNSV 163
           R++L D  C Y+        +G +D+++E++  +  +   L S      L++ LV    +
Sbjct: 133 REALSDVLCAYA-------DVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRI 185

Query: 164 GQYYKLCRAM----RGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
              ++L   M     G   CV  +    ++ GL  KG IE+   +      +G VPNIV 
Sbjct: 186 ETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVF 245

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N ++   C  G++ +A  LF  L + G  P + TF +L+N FCK    E    L   M 
Sbjct: 246 YNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMK 305

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           +  L  ++ +Y+ +ID  +K G   +  + L    +   + D+V ++++++ +   G+V 
Sbjct: 306 DRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVE 365

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A +  ++ +  G  PN ++Y+ L+ G C+QG   +A     ++    LE  +++Y +LI
Sbjct: 366 EAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALI 425

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI 450
            G   +G++    ++ D M+ RG+ PDA + ++L+NGL     +  A     + +   + 
Sbjct: 426 HGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIA 485

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P+ F++ TL+DG  R     +  KLF L+    + P V+ + V+I+G +  G + +AIL 
Sbjct: 486 PDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILC 545

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
             +M +    PD+ T+S II G  K  N++  L +F LM +    P++  Y  L+N   +
Sbjct: 546 IDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCR 605

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +     A KLF  +   GL+P ++TY+ +I  +C
Sbjct: 606 KGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFC 639



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 149/578 (25%), Positives = 279/578 (48%), Gaps = 44/578 (7%)

Query: 3   LKFKNLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCV 62
           +K K  +    +++   C+ +   + D    +A  +   ++K +N  P+      T+ C 
Sbjct: 124 MKTKETIPTREALSDVLCAYADVGLVD----KALEVYHGVVKLHNSLPS------TYACN 173

Query: 63  SSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD---YSFLI 119
           S      L+++L++    + A  ++D+M+             RD+  D   D    S ++
Sbjct: 174 S------LLNLLVKHRRIETAHQLYDEMID------------RDNGDDICVDNYTTSIMV 215

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +     G+I++ +++    S  G    P++V    L+        V   YKL + ++ KG
Sbjct: 216 KGLCLKGRIEDGIKLIE--SRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKG 273

Query: 178 FC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
           F      +  L+NG  + G+ E    +  ++  RG   N+   N I+      G    A 
Sbjct: 274 FIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAK 333

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
                +     +P++VT++TLIN FC   ++E+A +L    +   L P+ + Y+ L+ G 
Sbjct: 334 DTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGY 393

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G   +  + L+     GL++D++ + +++   V  G+V  A+   DRM+N G LP+ 
Sbjct: 394 CKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDA 453

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
             Y++L+ GL ++G+L  A  +  ++L + + P    Y++L+DGF + G L +   L+  
Sbjct: 454 NIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQL 513

Query: 414 MIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           +I++GL P  V  +++I     +G+M +A+    +  R   +P++F F+T++DG  +   
Sbjct: 514 IIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHN 573

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               +K+F LM   N KP+V+T+T LI G   +G    A  LF  M   GL P V+TYS 
Sbjct: 574 MNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSI 633

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           +I    K   +   +  F+LM  N   P+ A ++ L+N
Sbjct: 634 LIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVN 671



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/512 (21%), Positives = 221/512 (43%), Gaps = 93/512 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMS-------------------DMGIYLSPDLV----- 150
           Y+ LI+ Y + G+++ + ++F  +                     MG++ + DL+     
Sbjct: 246 YNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMK 305

Query: 151 QRLMSCLVD--SNSVGQYYKLCRAMRGKG-------------FCVYEFLMNGLLRKGVIE 195
            R +S  V   +N +   YKL   ++ K                 Y  L+N    +G +E
Sbjct: 306 DRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVE 365

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  +  Q I+RG  PN +T   ++   C  G+   A+     +   G + +++++  LI
Sbjct: 366 EAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALI 425

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +      +++ A  + + MM   ++PD  IY++L++GLFK G+L     +L   LD+ + 
Sbjct: 426 HGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIA 485

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC-- 373
            D  V+++++D ++  G++  A + +  ++  G  P V+ Y+++IKG  + G +  A   
Sbjct: 486 PDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILC 545

Query: 374 ---------------------------------GLFGQVLIRRLEPSLLTYSSLIDGFCK 400
                                             +FG ++ +  +P+++TY+SLI+G+C+
Sbjct: 546 IDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCR 605

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
            G+ +    L+  M   GLKP  V  S+LI        +G A+ +F   +     PN   
Sbjct: 606 KGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAA 665

Query: 456 FNTLMDGCCRLKRATDTVK--------------LFMLMGMYNIKPDVITHTVLIRGIASQ 501
           F+ L++G    K    + +               F  M           +  ++  +  Q
Sbjct: 666 FHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQ 725

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
             + +A+ L  +ML  GL  D +++ A+IHG+
Sbjct: 726 RMVKTALQLRNKMLAFGLCSDAVSFVALIHGI 757



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/354 (21%), Positives = 149/354 (42%), Gaps = 57/354 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI   V  G++D ++ I   M + GI    ++   LM+ L     +     +   M 
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEML 480

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +       VY  L++G +R G ++ A  + + +I++G  P +V  N ++K    +G + 
Sbjct: 481 DQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMD 540

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA    D +      P++ TFST+I+ + K+  +    +++ LM++ +  P+++ Y+ LI
Sbjct: 541 NAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLI 600

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD-------- 342
           +G  + G  K   +L       GLK  VV +S ++ ++     +G+AV  ++        
Sbjct: 601 NGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCT 660

Query: 343 -----------------------------------------RMLNGGFLPNVISYSILIK 361
                                                    RM+  G+     +Y+ ++ 
Sbjct: 661 PNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 720

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
            LCQQ  +  A  L  ++L   L    +++ +LI G C  G  ++    + NMI
Sbjct: 721 CLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKE----WRNMI 770


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 208/409 (50%), Gaps = 30/409 (7%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+NG+ + G    A  + R++ +    PN+V  + I+ RLC +  +  A  L+  ++
Sbjct: 166 YGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMV 225

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+VVT+S L++ FC   +L +A  L N M+  ++ PD+  Y+IL+D L K G++K
Sbjct: 226 GKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVK 285

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   +L   +   + LDVVV+S++MD Y  + +V  A + +  M   G  P+V  YSI+I
Sbjct: 286 EAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMI 345

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC+  R+ EA  LF ++  + + P  +TY+SLID  CKSG++   + L+D M+ RG  
Sbjct: 346 NGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQP 405

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           PD +                               +N L+D  C+       + LF  M 
Sbjct: 406 PDVIT------------------------------YNNLIDALCKNGHLDRAIALFNKMK 435

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              I+P+V T T+L+ G+   G L +A+  F  +L +G   +V TY+ +I+GL K   + 
Sbjct: 436 DQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLD 495

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
             L +   ME NG   D   + +++     +   D A KL  ++  RGL
Sbjct: 496 EALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 218/414 (52%), Gaps = 5/414 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  +++Q+      P+  T N I+   C  GQ+  A S    +L +G +PN +T +TL+ 
Sbjct: 77  AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMK 136

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C E K+++A + ++ ++        I Y ILI+G+ K G  +    LL       ++ 
Sbjct: 137 GLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRP 196

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV++S ++D       V  A   Y  M+  G  P+V++YSIL+ G C  G+L  A  L 
Sbjct: 197 NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLL 256

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            ++++  + P + TY+ L+D  CK GK+++  ++   M+K  +  D VV S L++G    
Sbjct: 257 NEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLV 316

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + +A R F+   +M + P++  ++ +++G C++KR  + + LF  +   N+ PD +T+
Sbjct: 317 NEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTY 376

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           T LI  +   G +S    LF +ML RG  PDVITY+ +I  L K  ++   + +F  M+ 
Sbjct: 377 TSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKD 436

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             + P++  + +LL+ L K   L  AL+ F  L  +G   ++ TY  +I G C 
Sbjct: 437 QAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCK 490



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 221/422 (52%), Gaps = 5/422 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++N     G +  AF    ++++ G+ PN +T N ++K LC+ G++  A    D +L  G
Sbjct: 99  IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + + +++  LIN  CK  +   A +L   +    + P+++IYS++ID L K   + E  
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAY 218

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L    + +G+  DVV +S ++  +  +G + RA+   + M+     P++ +Y+IL+  L
Sbjct: 219 DLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDAL 278

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G++ EA  +   ++   +   ++ YS+L+DG+C   ++ +   ++  M + G+ PD 
Sbjct: 279 CKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDV 338

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              S++INGL     + +AL  F +  +  ++P+   + +L+D  C+  R +    LF  
Sbjct: 339 HCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDE 398

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      PDVIT+  LI  +   G L  AI LF +M  + + P+V T++ ++ GL K   
Sbjct: 399 MLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGR 458

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   L  F+ +   G   ++  Y V++N L KE  LD AL L  ++ D G   D +T+  
Sbjct: 459 LKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEI 518

Query: 599 II 600
           +I
Sbjct: 519 MI 520



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 210/414 (50%), Gaps = 12/414 (2%)

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
           FH+H         P+    NKIL  L    +   A SL+  + L   +P+  T + +IN 
Sbjct: 50  FHVHP-------TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINC 102

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           FC   ++  AF   + ++++   P+ I  + L+ GL   G++KE        L +G +L 
Sbjct: 103 FCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLS 162

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
            + +  +++    IG+   A++   R+      PNV+ YS++I  LC+   + EA  L+ 
Sbjct: 163 GISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYT 222

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
           +++ + + P ++TYS L+ GFC  G+L     L + M+   + PD    ++L++ L    
Sbjct: 223 EMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEG 282

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            + +A       V+  +  ++ +++TLMDG C +    +  ++F  M    + PDV  ++
Sbjct: 283 KVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYS 342

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           ++I G+     +  A+ LF ++ ++ + PD +TY+++I  L K   IS    +F  M   
Sbjct: 343 IMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDR 402

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           G  PD+  YN L++ L K  +LD A+ LF ++ D+ + P++ T+  ++ G C +
Sbjct: 403 GQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKV 456



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 199/402 (49%), Gaps = 7/402 (1%)

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           F+PN+   +  L  L  N    +A S F+ +  V P P+   F+ ++ +     +   A 
Sbjct: 21  FLPNLCFHSHSLPPLTHNAD--DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAI 78

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            LY  M   ++ PD    +I+I+     G++      +   L  G + + +  +++M   
Sbjct: 79  SLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGL 138

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G V  A++ +D++L  GF  + ISY ILI G+C+ G    A  L  ++    + P++
Sbjct: 139 CLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNV 198

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           + YS +ID  CK   + + + LY  M+ +G+ PD V  S+L++G      +  A+    +
Sbjct: 199 VIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNE 258

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            V   + P+++ +  L+D  C+  +  +   +  +M    +  DV+ ++ L+ G      
Sbjct: 259 MVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNE 318

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +++A  +F+ M + G+TPDV  YS +I+GL K K +   L++F+ + +  + PD   Y  
Sbjct: 319 VNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTS 378

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L++ L K   +     LF ++ DRG  PD+ITYN +I   C 
Sbjct: 379 LIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCK 420



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 182/352 (51%), Gaps = 12/352 (3%)

Query: 91  VIQFGKTYNFFRLFRD----SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLS 146
           V + G+T    RL R     S+      YS +I+   +   +DE+ +++  M   GI  S
Sbjct: 173 VCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGI--S 230

Query: 147 PDLVQR--LMS--CLVD--SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHM 200
           PD+V    L+S  C+V   + ++    ++           Y  L++ L ++G ++ A ++
Sbjct: 231 PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENV 290

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
              +++     ++V  + ++   C+  ++ NA  +F  +  +G  P+V  +S +IN  CK
Sbjct: 291 LAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCK 350

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
             ++++A  L+  + + ++VPD + Y+ LID L K+GR+    +L    LDRG   DV+ 
Sbjct: 351 IKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVIT 410

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           +++++DA    G + RA+  +++M +    PNV +++IL+ GLC+ GRL  A   F  +L
Sbjct: 411 YNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLL 470

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            +    ++ TY+ +I+G CK G L +  +L   M   G   DAV   ++I  
Sbjct: 471 TKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRA 522



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 141/281 (50%), Gaps = 13/281 (4%)

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           AV  ++ M +    P+   ++ ++  L    R   A  L+ Q+ +  +EP   T + +I+
Sbjct: 42  AVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIIN 101

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF----FFQSVRM 447
            FC  G++   FS    ++K G +P+ +  + L+ GL     + +ALRF      Q  R+
Sbjct: 102 CFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRL 161

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
           + I     +  L++G C++      ++L   +  ++I+P+V+ ++++I  +     +  A
Sbjct: 162 SGIS----YGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEA 217

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             L+ +M+ +G++PDV+TYS ++ G      ++  + +   M    + PDI  Y +L++ 
Sbjct: 218 YDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDA 277

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           L KE  +  A  +   +    +  D++ Y+T++ GYC +N 
Sbjct: 278 LCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNE 318



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 113/240 (47%), Gaps = 4/240 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS L++ Y  + +++ +  +F  M+ MG+         +++ L     V +   L   + 
Sbjct: 306 YSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIH 365

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K        Y  L++ L + G I   + +  +++ RG  P+++T N ++  LC NG + 
Sbjct: 366 QKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLD 425

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +LF+ +     +PNV TF+ L++  CK  +L+ A + +  ++      ++  Y+++I
Sbjct: 426 RAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMI 485

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K G L E   L     D G   D V F  ++ A+    +  +A +    M+  G L
Sbjct: 486 NGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 153/586 (26%), Positives = 278/586 (47%), Gaps = 38/586 (6%)

Query: 47  NPTPAIQFFKWTHNCVSSPNIAQ-------LIHVLLQSDMRDVASHVFDKMVIQFGKTYN 99
           +P  A++ F+W     S P   +       ++ +L Q+++   A  V ++++       N
Sbjct: 94  SPRMALRLFRWAE---SQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVI-----NAN 145

Query: 100 FFRLFRDSLGDFGCDYS--------FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL-- 149
             R+    +G  GC  S         LI  Y +   +++ + +F  M  +   LSPD+  
Sbjct: 146 MHRIVDVLIG--GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKM--IKSRLSPDVKN 201

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVI 205
             R++  L D + + +  ++ R M   G       Y  L++   + G ++    +  ++ 
Sbjct: 202 CNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQ 261

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           +RG  PN VT N ++  L   G+   A  L   +L  G K +  T++ LI  +  +  L 
Sbjct: 262 RRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLA 321

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A  L   M+     P +  Y+  I GL K GR+ +  + L   L   L  DVV +++++
Sbjct: 322 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLI 381

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
             Y  +G++ +A   +D + +    P +++Y+ L+ GLC+QG L  A  L  +++   + 
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGDALRFFFQ 443
           P ++TY+ L++G CK G L      +D M+  GL+ D+   +  I G   +GD  R F  
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501

Query: 444 SVRM---TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
              M      P+L I+N ++DG C+L    +  +L   M    + PD +T+T +I     
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G L     +F++ML +GLTP V+TY+ +IHG      +      F  M+  G+ P++  
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           YN L+N L K   +D A   F ++ ++G+ P+  +Y  +I   C++
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNM 667



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 244/484 (50%), Gaps = 13/484 (2%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEF 183
           + ++VE++  M + GI  +      L+        V Q   L   M+ +G       Y  
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 274

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NGL +KG  E A  +  ++++ G   +  T N ++      G +  A SL + ++L G
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P V T+++ I   CK  ++  A Q  + M+  +L+PD++ Y+ LI G  + G L +  
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA- 393

Query: 304 ELLLTALDRGLKL--DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             LL    R + L   +V +++++D     G++  A Q    M+N G  P++++Y+IL+ 
Sbjct: 394 -FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C+ G L  A   F ++L   LE     Y++ I G  K G     FSL + M+ +G  P
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 512

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D ++ +++++GL     + +A     + V   +IP+   + +++       R     ++F
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    + P V+T+TVLI G A +G L  A + F +M ++G+ P+VITY+++I+GL K 
Sbjct: 573 YEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKV 632

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
           + +    + F  M   G+ P+   Y +L+N      N   AL L+ Q+ DRG++PD  T+
Sbjct: 633 RRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTH 692

Query: 597 NTII 600
           + ++
Sbjct: 693 SALL 696



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 253/545 (46%), Gaps = 70/545 (12%)

Query: 61  CVSSPNIAQ----LIHVLLQSDMRDVASHVFDKMV-----IQFGKTYNFFRLFRD----- 106
           CVSS    +    LI V  +  M +    VFDKM+               R+ RD     
Sbjct: 157 CVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMS 216

Query: 107 -------SLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM 154
                  ++G+FG       Y+ L+++Y + GK+ + +++ + M   G   +      L+
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 155 SCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
           + L       Q   L   M   G  V    Y  L+ G   KG++  A  +  +++ +G  
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 211 PNIVTCNKILKRLCINGQIGNASS-----------------------------------L 235
           P + T N  +  LC  G++ +A                                     L
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           FD L  +   P +VT++TL++  C++ +LE A QL   M+   + PD++ Y+IL++G  K
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 456

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G L    E     L  GL+LD   +++ +   + +GD  RA    + ML  GF P++I 
Sbjct: 457 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 516

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y++++ GLC+ G L EA  L  +++   + P  +TY+S+I    ++G+LR G  ++  M+
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576

Query: 416 KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            +GL P  V  ++LI+G  G      A  +F +     ++PN+  +N+L++G C+++R  
Sbjct: 577 SKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMD 636

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
                F  M    I P+  ++T+LI    + G+   A+ L+ QML RG+ PD  T+SA++
Sbjct: 637 QAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696

Query: 531 HGLFK 535
             L K
Sbjct: 697 KQLGK 701



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 143/292 (48%), Gaps = 35/292 (11%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++GL R+G +E A  +  ++I  G  P+IVT   ++   C  G +  A   FD +
Sbjct: 411 TYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM 470

Query: 240 LLVGPK-----------------------------------PNVVTFSTLINAFCKEAKL 264
           L  G +                                   P+++ ++ +++  CK   L
Sbjct: 471 LHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL 530

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E+A +L   M+   ++PD + Y+ +I    + GRL++G E+    L +GL   VV ++ +
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVL 590

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +  + G G + RA   +  M   G LPNVI+Y+ LI GLC+  R+ +A   F +++ + +
Sbjct: 591 IHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
            P+  +Y+ LI+  C  G  ++  SLY  M+ RG++PD+   S L+  L  D
Sbjct: 651 FPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 150/297 (50%), Gaps = 8/297 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM----SCLVDSNSVGQYYKLC 170
           Y+ L++   R G+++ + ++   M + GI  +PD+V   +    SC + S S+ Q +   
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGI--APDIVTYTILVNGSCKMGSLSMAQEFFDE 469

Query: 171 RAMRGKGFCVYEFLMN--GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
               G     Y +     G L+ G    AF +  +++ +GF P+++  N ++  LC  G 
Sbjct: 470 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGN 529

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  AS L   ++  G  P+ VT++++I+A  +  +L K  +++  M+   L P ++ Y++
Sbjct: 530 LEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTV 589

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G    GRL+          ++G+  +V+ ++S+++    +  + +A   +  M+  G
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG 649

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             PN  SY+ILI   C  G   EA  L+ Q+L R ++P   T+S+L+    K  KL+
Sbjct: 650 IFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 5/222 (2%)

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMT 448
           LI  + K   +    S++D MIK  L PD   C+ ++       LM  A+  +       
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + P +  +NTL+D  C+  +    + L   M      P+ +T+ VLI G++ +G    A 
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  +MLK GL     TY+ +I+G F    ++  L + + M   G +P +A YN  +  L
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
            K   +  A++    +    L PD+++YNT+I GYC L + +
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 257/522 (49%), Gaps = 13/522 (2%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +  K+Y  F   R  +      +S  I  + + GK+++++++F  M  +G+  SP++V  
Sbjct: 227 ELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGV--SPNVVTY 284

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L+  L    ++ + ++    M   G       Y  L+NGL++      A  + ++ ++
Sbjct: 285 NNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE 344

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +GF PN V  N ++   C  G +G+A  +   ++  G  PN VT +++I  FCK  ++E+
Sbjct: 345 KGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQ 404

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  +   M+      +   ++ +I  L    R +     L   L R ++ +  + ++++ 
Sbjct: 405 AECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVG 464

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G    AV+ + R+L  GF  N+++ + LI GLC+ G + EA  L  ++L R    
Sbjct: 465 GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 524

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
             +TY++LI G CK GK+ +GF L   M+K+G++PD    +LLI+G+     + +A+  +
Sbjct: 525 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 584

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +     L+PN++ +  ++DG C+  +  +  KLF  +   N++ + + +  LIR     
Sbjct: 585 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN 644

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G+   A  L   M  +G+ P   TYS++IHG+     +     +   M + G+ P++  Y
Sbjct: 645 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 704

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             L+    K   +D  + +  +++   + P+ ITY  +I GY
Sbjct: 705 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY 746



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/637 (24%), Positives = 293/637 (45%), Gaps = 45/637 (7%)

Query: 14  SINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHV 73
           S++   C +   H+S  QF+   ++  ++ +  NP  A+ FF +  +        +   V
Sbjct: 61  SLDSTQCKQLIPHLSPHQFD---SVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCV 117

Query: 74  LLQS--------DMRDVASHVFD-KMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVR 124
           L++S          R +   + D K+ + FG   N       ++ D     + + E+ V 
Sbjct: 118 LMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMADL----NEVGESGVA 173

Query: 125 IGKID----------------ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK 168
           +  +D                 ++ +F ++++ G++ +      L+S LV +N + + Y 
Sbjct: 174 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 233

Query: 169 LCRAMR-GKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
           +   MR G    VY F   +N   + G +E+A  +   + + G  PN+VT N ++  LC 
Sbjct: 234 VFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCK 293

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           +G +  A    + ++  G    ++T+S LIN   K  K  +A  +    +E    P+ ++
Sbjct: 294 HGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVV 353

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LIDG  K G L +   +    + +G+  + V  +S++  +  IG + +A    + ML
Sbjct: 354 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 413

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           + GF  N  +++ +I  LC   R   A     ++L+R + P+    ++L+ G CK GK  
Sbjct: 414 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 473

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
           D   L+  ++++G   + V  + LI+GL     M +A+R   + +    + +   +NTL+
Sbjct: 474 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 533

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
            GCC+  +  +  KL   M    I+PD  T+ +LI G+   G L  A+ L+ +   R L 
Sbjct: 534 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 593

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+V TY  +I G  K   I  G  +F  +    +  +  +YN L+    +  N   A KL
Sbjct: 594 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 653

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLN-----SCLID 612
              +  +G+ P   TY+++I G C++       CLID
Sbjct: 654 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 690



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 258/565 (45%), Gaps = 25/565 (4%)

Query: 51  AIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDS 107
           AIQ F        SPN+     LIH L +    D A    +KMV             +D 
Sbjct: 265 AIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV-------------KDG 311

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
           +      YS LI   +++ K +E+  +     + G   +  +   L+       ++G   
Sbjct: 312 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 371

Query: 168 KLCRAMRGKGFCVYEFLMN----GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
           ++   M  KG       +N    G  + G +E A  +  +++ RGF  N      I+  L
Sbjct: 372 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 431

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C+N +  +A      +LL   +PN    +TL+   CKE K   A +L+  ++E     +L
Sbjct: 432 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 491

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           +  + LI GL K G ++E   LL   L+RG  LD + +++++      G V    +    
Sbjct: 492 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 551

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+  G  P+  +Y++LI G+C+ G+L EA  L+ +   R L P++ TY  +IDG+CK+ K
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNT 458
           + +G  L+  ++ + L+ ++VV + LI     NG   +A +         + P    +++
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+ G C + R  D   L   M    + P+V+ +T LI G    G +   + +  +M    
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           + P+ ITY+ +I G  K  ++     +   M   G+ PD   YNVL N   KE  ++   
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGF 791

Query: 579 KLFGQLTDRGLEPDIITYNTIICGY 603
           K+   ++  GL  D ITY T++ G+
Sbjct: 792 KICDYMSQEGLPLDEITYTTLVHGW 816



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 247/499 (49%), Gaps = 9/499 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI    + G +DE+      M   G+  +      L++ L+      +   + +   
Sbjct: 284 YNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETL 343

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KGF     VY  L++G  + G + +A  +   ++ +G  PN VT N I++  C  GQ+ 
Sbjct: 344 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 403

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + + +L  G   N   F+T+I+  C  ++ E A +    M+  ++ P+  + + L+
Sbjct: 404 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 463

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K G+  +  EL    L++G   ++V  ++++      G++  AV+   +ML  GF+
Sbjct: 464 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 523

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            + I+Y+ LI G C++G++ E   L G+++ + +EP   TY+ LI G C+ GKL +  +L
Sbjct: 524 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 583

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++    R L P+     ++I+G      + +  + F + +   L  N  ++NTL+   CR
Sbjct: 584 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 643

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                +  KL   M    I P   T++ LI G+ + G +  A  L  +M K GL P+V+ 
Sbjct: 644 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 703

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+A+I G  K   +   +++ + M    + P+   Y V+++   K  ++  A KL  ++ 
Sbjct: 704 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 763

Query: 586 DRGLEPDIITYNTIICGYC 604
            +G+ PD +TYN +  G+C
Sbjct: 764 GKGIVPDTVTYNVLTNGFC 782



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 188/352 (53%), Gaps = 5/352 (1%)

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
           S++V  +++L     G        L++GL + G ++ A  + +++++RGFV + +T N +
Sbjct: 473 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 532

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +   C  G++     L   ++  G +P+  T++ LI+  C+  KL++A  L+N     DL
Sbjct: 533 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 592

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           VP++  Y ++IDG  KA +++EG +L    L + L+L+ VV+++++ AY   G+   A +
Sbjct: 593 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 652

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            +D M + G  P   +YS LI G+C  GR+ +A  L  ++    L P+++ Y++LI G+C
Sbjct: 653 LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 712

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLF 454
           K G++    ++   M    + P+ +  +++I+G      M  A +   + V   ++P+  
Sbjct: 713 KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 772

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
            +N L +G C+  +  +  K+   M    +  D IT+T L+ G     +L++
Sbjct: 773 TYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALTN 824


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 257/522 (49%), Gaps = 13/522 (2%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +  K+Y  F   R  +      +S  I  + + GK+++++++F  M  +G+  SP++V  
Sbjct: 294 ELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGV--SPNVVTY 351

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L+  L    ++ + ++    M   G       Y  L+NGL++      A  + ++ ++
Sbjct: 352 NNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE 411

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +GF PN V  N ++   C  G +G+A  +   ++  G  PN VT +++I  FCK  ++E+
Sbjct: 412 KGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQ 471

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  +   M+      +   ++ +I  L    R +     L   L R ++ +  + ++++ 
Sbjct: 472 AECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVG 531

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G    AV+ + R+L  GF  N+++ + LI GLC+ G + EA  L  ++L R    
Sbjct: 532 GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 591

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
             +TY++LI G CK GK+ +GF L   M+K+G++PD    +LLI+G+     + +A+  +
Sbjct: 592 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 651

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +     L+PN++ +  ++DG C+  +  +  KLF  +   N++ + + +  LIR     
Sbjct: 652 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN 711

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G+   A  L   M  +G+ P   TYS++IHG+     +     +   M + G+ P++  Y
Sbjct: 712 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 771

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             L+    K   +D  + +  +++   + P+ ITY  +I GY
Sbjct: 772 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY 813



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/637 (24%), Positives = 293/637 (45%), Gaps = 45/637 (7%)

Query: 14  SINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHV 73
           S++   C +   H+S  QF+   ++  ++ +  NP  A+ FF +  +        +   V
Sbjct: 128 SLDSTQCKQLIPHLSPHQFD---SVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCV 184

Query: 74  LLQS--------DMRDVASHVFD-KMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVR 124
           L++S          R +   + D K+ + FG   N       ++ D     + + E+ V 
Sbjct: 185 LMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMADL----NEVGESGVA 240

Query: 125 IGKID----------------ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK 168
           +  +D                 ++ +F ++++ G++ +      L+S LV +N + + Y 
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 300

Query: 169 LCRAMR-GKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
           +   MR G    VY F   +N   + G +E+A  +   + + G  PN+VT N ++  LC 
Sbjct: 301 VFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCK 360

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           +G +  A    + ++  G    ++T+S LIN   K  K  +A  +    +E    P+ ++
Sbjct: 361 HGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVV 420

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LIDG  K G L +   +    + +G+  + V  +S++  +  IG + +A    + ML
Sbjct: 421 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 480

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           + GF  N  +++ +I  LC   R   A     ++L+R + P+    ++L+ G CK GK  
Sbjct: 481 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 540

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
           D   L+  ++++G   + V  + LI+GL     M +A+R   + +    + +   +NTL+
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
            GCC+  +  +  KL   M    I+PD  T+ +LI G+   G L  A+ L+ +   R L 
Sbjct: 601 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 660

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+V TY  +I G  K   I  G  +F  +    +  +  +YN L+    +  N   A KL
Sbjct: 661 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 720

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLN-----SCLID 612
              +  +G+ P   TY+++I G C++       CLID
Sbjct: 721 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 757



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 247/499 (49%), Gaps = 9/499 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI    + G +DE+      M   G+  +      L++ L+      +   + +   
Sbjct: 351 YNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETL 410

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KGF     VY  L++G  + G + +A  +   ++ +G  PN VT N I++  C  GQ+ 
Sbjct: 411 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 470

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + + +L  G   N   F+T+I+  C  ++ E A +    M+  ++ P+  + + L+
Sbjct: 471 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 530

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K G+  +  EL    L++G   ++V  ++++      G++  AV+   +ML  GF+
Sbjct: 531 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 590

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            + I+Y+ LI G C++G++ E   L G+++ + +EP   TY+ LI G C+ GKL +  +L
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 650

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++    R L P+     ++I+G      + +  + F + +   L  N  ++NTL+   CR
Sbjct: 651 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 710

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                +  KL   M    I P   T++ LI G+ + G +  A  L  +M K GL P+V+ 
Sbjct: 711 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 770

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+A+I G  K   +   +++ + M    + P+   Y V+++   K  ++  A KL  ++ 
Sbjct: 771 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 830

Query: 586 DRGLEPDIITYNTIICGYC 604
            +G+ PD +TYN +  G+C
Sbjct: 831 GKGIVPDTVTYNVLTNGFC 849



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 227/450 (50%), Gaps = 13/450 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y ++G + +++ I   M   GI  +   +  ++        + Q   +   M 
Sbjct: 421 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 480

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF +    +  +++ L      E+A    R+++ R   PN      ++  LC  G+  
Sbjct: 481 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 540

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  L+  LL  G   N+VT + LI+  CK   +++A +L   M+E   V D I Y+ LI
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K G+++EG +L    + +G++ D   ++ ++     IG +  AV  ++   +   +
Sbjct: 601 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 660

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV +Y ++I G C+  ++ E   LF ++L + LE + + Y++LI  +C++G   + F L
Sbjct: 661 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 720

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +D+M  +G+ P     S LI+G+     M DA     +  +  L+PN+  +  L+ G C+
Sbjct: 721 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 780

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           L +    V +   M  Y+I P+ IT+TV+I G +  G + +A  L  +M+ +G+ PD +T
Sbjct: 781 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 840

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           Y+ + +G  K   I  G    KL+  +GV 
Sbjct: 841 YNVLTNGFCKEGKIEEG----KLLAEDGVG 866



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 243/539 (45%), Gaps = 25/539 (4%)

Query: 51  AIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDS 107
           AIQ F        SPN+     LIH L +    D A    +KMV             +D 
Sbjct: 332 AIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV-------------KDG 378

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
           +      YS LI   +++ K +E+  +     + G   +  +   L+       ++G   
Sbjct: 379 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 438

Query: 168 KLCRAMRGKGFCVYEFLMN----GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
           ++   M  KG       +N    G  + G +E A  +  +++ RGF  N      I+  L
Sbjct: 439 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 498

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C+N +  +A      +LL   +PN    +TL+   CKE K   A +L+  ++E     +L
Sbjct: 499 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 558

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           +  + LI GL K G ++E   LL   L+RG  LD + +++++      G V    +    
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 618

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+  G  P+  +Y++LI G+C+ G+L EA  L+ +   R L P++ TY  +IDG+CK+ K
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 678

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNT 458
           + +G  L+  ++ + L+ ++VV + LI     NG   +A +         + P    +++
Sbjct: 679 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 738

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+ G C + R  D   L   M    + P+V+ +T LI G    G +   + +  +M    
Sbjct: 739 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 798

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           + P+ ITY+ +I G  K  ++     +   M   G+ PD   YNVL N   KE  ++  
Sbjct: 799 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 202/368 (54%), Gaps = 5/368 (1%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P+VV++ST+IN +C   +L+K  +L   M    L P+L  Y+ +I  L K+G++ + 
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             +L   +++G+  D VV+++++D +  +G++  A + +D M     +P+ I+Y+ +I G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC+ G+++EA  +F ++  R +EP  +TY++LIDG+CKSG++   FSL++ M++ GL P+
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + L +GL     +  A     +     L  N+  +N+L++G C+       VKL  
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M +  + PD IT T L+      G +  A  L  +ML RGL P VIT++ +++G     
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +  G  +   M   G+ P+   YN L+       N+    +++  +  RG+ PD  TYN
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364

Query: 598 TIICGYCS 605
            +I G+C 
Sbjct: 365 ILIKGHCK 372



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 247/472 (52%), Gaps = 38/472 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS +I  Y   G++ + +++   M   G  L P+L     ++  L  S  V    ++ R 
Sbjct: 13  YSTVINGYCLGGELQKVLKLIQEMQMKG--LKPNLYTYNSIILLLCKSGKVDDAERVLRE 70

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G      VY  L++G  + G I+ A+ +  ++ ++  VP+ +    ++  LC  G+
Sbjct: 71  MINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGK 130

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F+ +   G +P+ VT++TLI+ +CK  ++EKAF L+N M++  L P+++ Y+ 
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTA 190

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L DGL K G++   NELL     +GL+L++  ++S+++     G++ +AV+  + M   G
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ I+++ L+   C+ G +V+A  L  ++L R L+P+++T++ L++GFC SG L DG 
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGE 310

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L   M+++G                              ++PN   +N+LM   C    
Sbjct: 311 RLLAWMLEKG------------------------------IMPNTTTYNSLMKQYCIRNN 340

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
              T +++  M    + PD  T+ +LI+G     ++  A  L  +M ++G      +Y++
Sbjct: 341 MRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           II G FK K IS    +F+ M R G+A D  IYN+ +++   E N++ AL+L
Sbjct: 401 IIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 220/425 (51%), Gaps = 5/425 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++NG    G ++    + +++  +G  PN+ T N I+  LC +G++ +A  +   ++
Sbjct: 13  YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+ V ++TLI+ FCK   ++ A++L++ M +  +VPD I Y+ +I GL + G++ 
Sbjct: 73  NQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMM 132

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E +++      RG++ D V +++++D Y   G++ +A   +++M+  G  PNV++Y+ L 
Sbjct: 133 EADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALA 192

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC+ G++  A  L  ++  + L+ ++ TY+SL++G CKSG +R    L + M   G+ 
Sbjct: 193 DGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMY 252

Query: 421 PDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD +  + L++     G M  A     + +   L P +  FN LM+G C      D  +L
Sbjct: 253 PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL 312

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M    I P+  T+  L++    + ++     ++  M  RG+ PD  TY+ +I G  K
Sbjct: 313 LAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            +N+     + K M   G     + YN ++    K+  +  A +LF ++   G+  D   
Sbjct: 373 ARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEI 432

Query: 596 YNTII 600
           YN  +
Sbjct: 433 YNLFV 437



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 199/397 (50%), Gaps = 5/397 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           RG  P++V+ + ++   C+ G++     L   + + G KPN+ T++++I   CK  K++ 
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A ++   M+   +VPD ++Y+ LIDG  K G ++   +L      + +  D + +++V+ 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G +  A + +++M + G  P+ ++Y+ LI G C+ G + +A  L  Q++   L P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           +++TY++L DG CK G++     L   M  +GL+ +    + L+NGL     +  A++  
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +     + P+   F TLMD  C+        +L   M    ++P VIT  VL+ G    
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G L     L   ML++G+ P+  TY++++       N+     ++K M   GV PD   Y
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTY 363

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           N+L+    K  N+  A  L  ++ ++G      +YN+
Sbjct: 364 NILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 171/334 (51%), Gaps = 5/334 (1%)

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            PD++ YS +I+G    G L++  +L+     +GLK ++  ++S++      G V  A +
Sbjct: 7   APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
               M+N G +P+ + Y+ LI G C+ G +  A  LF ++  +R+ P  + Y+++I G C
Sbjct: 67  VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLF 454
           + GK+ +   +++ M  RG++PD V  + LI+G      M  A     Q V+  L PN+ 
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +  L DG C+L +     +L   M    ++ ++ T+  L+ G+   G++  A+ L  +M
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
              G+ PD IT++ ++    K   +     + + M   G+ P +  +NVL+N       L
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGML 306

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +   +L   + ++G+ P+  TYN+++  YC  N+
Sbjct: 307 EDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNN 340



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 4/245 (1%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           C Y+ L+    + G I ++V++   M   G+Y        LM     +  + + ++L R 
Sbjct: 221 CTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLRE 280

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       +  LMNG    G++E+   +   ++++G +PN  T N ++K+ CI   
Sbjct: 281 MLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNN 340

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +   + ++  +   G  P+  T++ LI   CK   +++A+ L+  M E         Y+ 
Sbjct: 341 MRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I G FK  ++ E  EL       G+  D  +++  +D   G G++  A++  D  +   
Sbjct: 401 IIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIENC 460

Query: 349 FLPNV 353
           FL  +
Sbjct: 461 FLNRI 465



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 55/92 (59%)

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           RG  PDV++YS +I+G   G  +   L + + M+  G+ P++  YN ++ +L K   +D 
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           A ++  ++ ++G+ PD + Y T+I G+C L +
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGN 95



 Score = 38.5 bits (88), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 31/52 (59%)

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           M+  G APD+  Y+ ++N       L   LKL  ++  +GL+P++ TYN+II
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSII 52


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 235/455 (51%), Gaps = 9/455 (1%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G DY  ++ N +R  K+D+S+++F +M       S     RL+S +           L  
Sbjct: 46  GSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWE 105

Query: 172 AMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M+  G     C    L+N   R   +  A     ++I+ G  P+IVT   +L   C   
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD 165

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ +A  +FD ++ +G KPNVV ++T+I+  CK  +++ A  L N M +  + PD++ Y+
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL  +GR  +   ++     R +  DV  F++++DA V  G V  A + Y+ M+  
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              P++++YS+LI GLC   RL EA  +FG ++ +   P ++TYS LI+G+CKS K+  G
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+  M +RG+  + V  ++LI G      +  A   F + V   + PN+  +N L+ G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C   +    + +   M    +  D++T+ ++IRG+   G ++ A  ++  +  +GL PD
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           + TY+ ++ GL+K         +F+ M+ +G+ P+
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 197/382 (51%), Gaps = 5/382 (1%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ ++  LF  ++   P P++  FS L++A  K  K +    L+  M  + +  +L   +
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           IL++   +  +L      L   +  G +  +V F S+++ +     V  A+  +D+M+  
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G+ PNV+ Y+ +I GLC+  ++  A  L  ++    + P ++TY+SLI G C SG+  D 
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             +   M KR + PD    + LI+     G + +A  F+ + +R +L P++  ++ L+ G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C   R  +  ++F  M      PDV+T+++LI G      +   + LF +M +RG+  +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +TY+ +I G  +   ++V   +F+ M   GV P+I  YNVLL+ L     ++ AL +  
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
            +   G++ DI+TYN II G C
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMC 442



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 10/211 (4%)

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           I GFC S +     S Y  M++ G++             + D+L  FF  V+   +P++ 
Sbjct: 33  ICGFCFSRRAYSNGSDYREMLRNGIRFMK----------LDDSLDLFFHMVQCRPLPSIA 82

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            F+ L+    ++K+    + L+  M M  I  ++ T  +L+        LS A+    +M
Sbjct: 83  DFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM 142

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           +K G  P ++T+ ++++G  +G  +   L+MF  M   G  P++ IYN +++ L K   +
Sbjct: 143 IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           D AL L  ++   G+ PD++TYN++I G CS
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 31/253 (12%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           +  + R SL      YS LI       ++DE+ E+F +M   G +  PD+V         
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF--PDVV--------- 327

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
                                Y  L+NG  +   +E+   +  ++ QRG V N VT   +
Sbjct: 328 --------------------TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           ++  C  G++  A  +F  ++  G  PN++T++ L++  C   K+EKA  +   M +  +
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
             D++ Y+I+I G+ KAG + +  ++  +   +GL  D+  ++++M      G    A  
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADA 487

Query: 340 TYDRMLNGGFLPN 352
            + +M   G LPN
Sbjct: 488 LFRKMKEDGILPN 500


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 215/430 (50%), Gaps = 13/430 (3%)

Query: 185 MNGLLRKGVIENAFHMHRQVIQRG--FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
           +  L+++G I+ A  +   +   G    P +V CN ++KRLC +G++ +A  +F  L   
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           GP   VVT++T++N +C+  ++E A +L N    M   PD   ++ LI  L   GR+ + 
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLIN---GMPFPPDTFTFNPLIRALCVRGRIPDA 270

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             +    L RG    VV +S ++DA        +A+   D M   G  P++++Y++LI  
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           +C +G + EA  +   +     +P  +TY+ ++   C S + ++   L   M      PD
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390

Query: 423 AV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V     V SL   GL+  A+           + ++  +++++DG C + R  D V+L  
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLS 450

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            +  Y  KPD I +T +++G+ S      A  L  +ML     PD +T++ ++  L +  
Sbjct: 451 RLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKG 510

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +   + + + M  NG +PDI  YN +++ L  E  +D A++L   L   G +PDI+T+N
Sbjct: 511 LVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFN 570

Query: 598 TIICGYCSLN 607
           T++ G C ++
Sbjct: 571 TLLKGLCGVD 580



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 233/492 (47%), Gaps = 19/492 (3%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA----MRGKG---- 177
           G+I +++ +F  M   G   SP +V    S L+D+      Y+   A    MR KG    
Sbjct: 265 GRIPDALAVFDDMLHRGC--SPSVVT--YSILLDATCKESGYRQAMALLDEMRAKGCEPD 320

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y  L+N +  +G ++ A ++   +   G  P+ VT   +LK LC + +      L  
Sbjct: 321 IVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLA 380

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +      P+ VTF+T++ + C++  +++A ++ + M E   V D++ YS ++DGL   G
Sbjct: 381 EMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVG 440

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           R+ +  ELL      G K D + +++V+          RA +    ML     P+ ++++
Sbjct: 441 RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFN 500

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            ++  LCQ+G +  A  +  Q+      P ++TY+ +IDG C    + D   L  ++   
Sbjct: 501 TVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSC 560

Query: 418 GLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G KPD V  + L+ GL G     DA +     +R    P+   FNT++   C+    T  
Sbjct: 561 GCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQA 620

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           ++   +M      P+  T+++++  +   G   +A+ L   M     TPD+ITY+ +I  
Sbjct: 621 IETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISN 678

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K   +   L + ++M  NG+ PD   Y  L   + +E   D A+++  ++ D GL PD
Sbjct: 679 LTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPD 738

Query: 593 IITYNTIICGYC 604
              YN ++ G+C
Sbjct: 739 TTFYNDVLLGFC 750



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 245/522 (46%), Gaps = 42/522 (8%)

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLV------------------QRLMSCLVDS 160
           + + V+ G+IDE++ +F  M+  G    P +V                  +R+ + L  S
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 161 NSVGQYYKL----CRAMR---------GKGFCVYEFLMNGLLR----KGVIENAFHMHRQ 203
            +V  Y  +    CRA R         G  F    F  N L+R    +G I +A  +   
Sbjct: 217 ATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDD 276

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           ++ RG  P++VT + +L   C       A +L D +   G +P++VT++ LINA C E  
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +++A  + + +      PD + Y+ ++  L  + R KE  ELL          D V F++
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++ +    G V RA++  D M   G + ++++YS ++ GLC  GR+ +A  L  ++    
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDAL 438
            +P  + Y++++ G C + +      L   M+     PD      VV SL   GL+  A+
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           R   Q       P++  +N ++DG C      D ++L   +     KPD++T   L++G+
Sbjct: 517 RVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                   A  L   M++    PD +T++ +I  L +   ++  +   K+M  NG  P+ 
Sbjct: 577 CGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNS 636

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           + Y+++++ L+K     AAL+L   +T+    PD+ITYNT+I
Sbjct: 637 STYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVI 676



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 127/299 (42%), Gaps = 45/299 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLC 170
           ++ ++ +  + G +D ++ +   MS+ G   SPD+V    +C++D     + +    +L 
Sbjct: 499 FNTVVASLCQKGLVDRAIRVVEQMSENGC--SPDIVT--YNCIIDGLCNESCIDDAMELL 554

Query: 171 RAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI- 225
             ++  G       +  L+ GL      E+A  +   +++    P+ +T N ++  LC  
Sbjct: 555 SDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQK 614

Query: 226 ---------------NGQIGNASS---LFDVLLLVGPK--------------PNVVTFST 253
                          NG + N+S+   + D LL  G                P+++T++T
Sbjct: 615 GLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNT 674

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +I+   K  K+E+A  L  +M+   L PD   Y  L  G+ +         +L    D G
Sbjct: 675 VISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG 734

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           L  D   ++ V+  +        A+  +  M++ G +P+  +Y IL++ L   G L EA
Sbjct: 735 LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEA 793


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 226/406 (55%), Gaps = 8/406 (1%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +IQ   +P+IV  +K+L ++  +       SLF  + + G   ++ +++ +IN  C+ ++
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
              A  +   MM+    PD++  S LI+G  +  R+ +  +L+    + G + DVV++++
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D    IG V  AV+ +DRM   G   + ++Y+ L+ GLC  GR  +A  L   +++R 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           + P+++T++++ID F K GK  +   LY+ M +R + PD    + LINGL     + +A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           +     V    +P++  +NTL++G C+ KR  +  KLF  M    +  D IT+  +I+G 
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G   +A  +F +M  R   P++ TYS +++GL     +   L +F+ M+++ +  DI
Sbjct: 301 FQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 357

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             YN++++ + K  N++ A  LF  L+ +GL+PD+++Y T+I G+C
Sbjct: 358 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 403



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 202/386 (52%), Gaps = 6/386 (1%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G     Y  ++N L R      A  +  ++++ G+ P++VT + ++   C   ++ +A  
Sbjct: 42  GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 101

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   +  +G +P+VV ++T+I+  CK   +  A +L++ M    +  D + Y+ L+ GL 
Sbjct: 102 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 161

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            +GR  +   L+   + R +  +V+ F++V+D +V  G    A++ Y+ M      P+V 
Sbjct: 162 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 221

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI GLC  GR+ EA  +   ++ +   P ++TY++LI+GFCKS ++ +G  L+  M
Sbjct: 222 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 281

Query: 415 IKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            +RGL  D +  + +I G       DA +  F   RM   PN+  ++ L+ G C   R  
Sbjct: 282 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS--RMDSRPNIRTYSILLYGLCMNWRVE 339

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + LF  M    I+ D+ T+ ++I G+   G++  A  LF  +  +GL PDV++Y+ +I
Sbjct: 340 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 399

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAP 556
            G  + +       +++ M+ +G+ P
Sbjct: 400 SGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 193/413 (46%), Gaps = 41/413 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I    R  +   ++ +   M   G    PD+V    L++     N V     L   
Sbjct: 48  YNIVINCLCRCSRFVIALSVVGKMMKFG--YEPDVVTVSSLINGFCQGNRVFDAIDLVSK 105

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   GF     +Y  +++G  + G++ +A  +  ++ + G   + VT N ++  LC +G+
Sbjct: 106 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 165

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             +A+ L   +++    PNV+TF+ +I+ F KE K  +A +LY  M    + PD+  Y+ 
Sbjct: 166 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 225

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+GL   GR+ E  ++L   + +G   DVV ++++++ +     V    + +  M   G
Sbjct: 226 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 285

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            + + I+Y+ +I+G  Q GR   A  +F ++  R   P++ TYS L+ G C + ++    
Sbjct: 286 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL 342

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L++NM K  ++ D    +++I+G+                              C++  
Sbjct: 343 VLFENMQKSEIELDITTYNIVIHGM------------------------------CKIGN 372

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             D   LF  +    +KPDV+++T +I G   +     + LL+ +M + GL P
Sbjct: 373 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 53/94 (56%)

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M++    P ++ +S ++  + K KN  + + +F  ME  G+  D+  YN+++N L +   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
              AL + G++   G EPD++T +++I G+C  N
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGN 94



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 59/121 (48%)

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P ++  + ++  IA   +    I LF  M   G+  D+ +Y+ +I+ L +     + L +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
              M + G  PD+   + L+N   +   +  A+ L  ++ + G  PD++ YNTII G C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 606 L 606
           +
Sbjct: 128 I 128


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 222/419 (52%), Gaps = 7/419 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +   +++RGF  N+   N +LK  C +G    A  LF ++      P+ V+++T+IN
Sbjct: 113 AFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVIN 172

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK  +L +A +L+  M   +  P+ + +S LIDG  K G ++EG  LL      GL+ 
Sbjct: 173 GLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG 232

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           DV V+S+++  +   GD+ R  + ++ ML     PNV++YS L+  LC++ +  EA  + 
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
             +   ++ P ++ Y+ L DG  K+G+  D   + D M+KRG +P+ V  + +INGL   
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKE 352

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVI 489
             + DAL       +    P++  ++TL+ G C + +  + V L  L+    ++IKPDV 
Sbjct: 353 GRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
              ++I+ +  Q  L  A  +++ M++RG   +++TY+ +I G      ++  L ++K  
Sbjct: 413 AFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDA 472

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
             +G++P+ A Y VL+N L K   L  A  LF +    G  P +  YNT++   C  +S
Sbjct: 473 VDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESS 531



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 252/504 (50%), Gaps = 17/504 (3%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCR 171
           +++ L++ + + G   +++++F  M      L PD V    +++ L     + +  +L +
Sbjct: 131 NFNLLLKGFCQSGDSHKAMDLFCMMKRN--CLIPDCVSYNTVINGLCKGKRLVEAKELFK 188

Query: 172 AMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            M+G G C      +  L++G  + G +E  F +  ++ + G   ++   + ++   C  
Sbjct: 189 EMKG-GECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSK 247

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G I     LF+ +L     PNVVT+S L+NA CK+ K ++A Q+ + M    + PD++ Y
Sbjct: 248 GDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAY 307

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++L DGL K GR  +  ++L   + RG + + V ++++++     G V  A+   + M  
Sbjct: 308 TVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAK 367

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR--LEPSLLTYSSLIDGFCKSGKL 404
            G  P+V++YS L+KGLC  G++ EA  L   ++ +   ++P +  ++ +I   CK  +L
Sbjct: 368 KGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRL 427

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTL 459
           R    +Y  M++RG   + V  ++LI+G +       AL  +  +V   + PN   +  L
Sbjct: 428 RHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVL 487

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           ++G C+++  +    LF        +P V  +  L+  +  + S+  A  LF +M     
Sbjct: 488 INGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANH 547

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PDV++++ II G  K  ++     +   M    + PD   +++L+N  +K   LD A  
Sbjct: 548 DPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAAS 607

Query: 580 LFGQLTDRGLEPDIITYNTIICGY 603
           L+ ++   G  PD + +++++ GY
Sbjct: 608 LYERMVSCGHVPDAVLFDSLLKGY 631



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/534 (26%), Positives = 258/534 (48%), Gaps = 23/534 (4%)

Query: 93  QFGKTYNFFRLF----RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           Q G ++    LF    R+ L      Y+ +I    +  ++ E+ E+F  M   G    P+
Sbjct: 141 QSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK--GGECKPN 198

Query: 149 LVQRLMSCLVD----SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHM 200
            V    S L+D    +  V + + L   M   G      VY  L++G   KG IE    +
Sbjct: 199 SVT--FSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKEL 256

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             +++++   PN+VT + ++  LC   +   A+ + D +     +P+VV ++ L +   K
Sbjct: 257 FNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSK 316

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
             +   A ++ +LM++    P+ + Y+ +I+GL K GR+ +   +L T   +G K DVV 
Sbjct: 317 NGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGF--LPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           +S+++    G+G +  AV   + +++  F   P+V +++++I+ LC+Q RL  A  ++  
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----M 434
           ++ R    +++TY+ LIDG+  +GKL     L+ + +  G+ P+A   ++LINGL    M
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496

Query: 435 GDALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
               +  F   R +   P +  +NTLM   CR         LF  M   N  PDV++  +
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I G    G + SA  L  +ML   L PD IT+S +I+   K   +     +++ M   G
Sbjct: 557 IIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             PD  +++ LL     +   +  + +  Q+ D+ +  D    +TI+   C+++
Sbjct: 617 HVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMS 670



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 205/430 (47%), Gaps = 7/430 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++ L +    ++   +H ++      P   + + +++      +   A  +  +++  G
Sbjct: 65  LIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRG 124

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
              NV  F+ L+  FC+     KA  L+ +M    L+PD + Y+ +I+GL K  RL E  
Sbjct: 125 FHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAK 184

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL         K + V FS+++D +   GDV       + M   G   +V  YS LI G 
Sbjct: 185 ELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGF 244

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C +G +     LF ++L + + P+++TYS L++  CK  K ++   + D M    ++PD 
Sbjct: 245 CSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDV 304

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  ++L +GL       DA++     V+    PN   +N +++G C+  R  D + +   
Sbjct: 305 VAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILET 364

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR--GLTPDVITYSAIIHGLFKG 536
           M     KPDV+T++ L++G+   G +  A+ L   ++ +   + PDV  ++ +I  L K 
Sbjct: 365 MAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQ 424

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
           + +     ++  M   G   +I  YN+L++  +    L  AL+L+    D G+ P+  TY
Sbjct: 425 RRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATY 484

Query: 597 NTIICGYCSL 606
             +I G C +
Sbjct: 485 TVLINGLCKM 494



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 191/366 (52%), Gaps = 7/366 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+  + +TLI+   K    +    +++ M  + + P     S LI+      +      +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L   + RG  L+V  F+ ++  +   GD  +A+  +  M     +P+ +SY+ +I GLC+
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
             RLVEA  LF ++     +P+ +T+S+LIDGFCK+G + +GF L + M K GL+ D  V
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 426 CSLLINGL--MGDALR---FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            S LI+G    GD  R    F + +R  + PN+  ++ LM+  C+ ++  +  ++   M 
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              ++PDV+ +TVL  G++  G  S AI +   M+KRG  P+ +TY+AII+GL K   + 
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVD 356

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR--GLEPDIITYNT 598
             L + + M + G  PD+  Y+ L+  L     +D A+ L   L  +   ++PD+  +N 
Sbjct: 357 DALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNL 416

Query: 599 IICGYC 604
           +I   C
Sbjct: 417 VIQELC 422


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 236/465 (50%), Gaps = 46/465 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ L++ L   G++++A     +V Q    PN  TCN IL RL  N Q G    LF+ L
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL 194

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
               P PNV TF+ +I+  CK+ +L +A  L+  M  M   PD++ Y+ LIDG  K G L
Sbjct: 195 ----PAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250

Query: 300 KEGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +E  ELL++ + + G   DVV ++++++ +   G + +A   +  M   G + NV++ S 
Sbjct: 251 EE-VELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLST 309

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            +   C++G + EA  LF Q+ +R + P+  TY+SL+DG CK+G+L D   L D M+ +G
Sbjct: 310 FVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 369

Query: 419 LKPDAVVCSLLINGL--------MGDALRFFFQS-------VRMTLIPNLF--------- 454
           L P+ V  +++++GL          D L    ++       +  TLI   F         
Sbjct: 370 LVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERAL 429

Query: 455 ----------------IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
                           ++ TL+ G C++++  +   L   M    ++P+ + +T ++   
Sbjct: 430 DLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAF 489

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G  S A+ L  ++   GL P+V+TY A+I GL K  +I   +  F  M   G+ P++
Sbjct: 490 FKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNV 549

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +Y  L++   K  +L  A+ L  ++ D+G+  D + Y ++I G+
Sbjct: 550 QVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGH 594



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 237/483 (49%), Gaps = 17/483 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLC 170
           ++ +I+   + G++ E+  +F  M  MG   SPD+V    + L+D       + +   L 
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGC--SPDVVT--YNSLIDGYGKCGELEEVELLV 257

Query: 171 RAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             MR  G       Y  L+N   + G IE A+    ++ + G + N+VT +  +   C  
Sbjct: 258 SEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKE 317

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A  LF  + + G  PN  T+++L++  CK  +L+ A  L + M+   LVP+++ Y
Sbjct: 318 GLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 377

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++++DGL K G++   +++L      G+K + +++++++  +    +  RA+   + M N
Sbjct: 378 TVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKN 437

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G   +V  Y  LI GLC+  +L EA  L  ++    L P+ + Y++++D F K+GK  +
Sbjct: 438 KGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESE 497

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
             +L   +   GL+P+ V    LI+GL     + +A+  F +   + L PN+ ++ TL+D
Sbjct: 498 AVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLID 557

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C++   +  V L   M    +  D + +T LI G   QG L  A  L  +M++ GL  
Sbjct: 558 GFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQL 617

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D+  Y+  I G      +     +   M   G+ PD   YN L+    K  N++ A  L 
Sbjct: 618 DLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQ 677

Query: 582 GQL 584
            ++
Sbjct: 678 NEM 680



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 237/487 (48%), Gaps = 5/487 (1%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLM 185
           G +D++V   A +  + +  +      ++  L  +   G   +L   +       +  ++
Sbjct: 147 GLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPAPNVFTFNIVI 206

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           + L ++G +  A  +  ++   G  P++VT N ++      G++     L   +   G  
Sbjct: 207 DFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCA 266

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
            +VVT++ LIN F K   +EKA+  +  M  + ++ +++  S  +D   K G ++E  +L
Sbjct: 267 ADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKL 326

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
                 RG+  +   ++S++D     G +  A+   D M++ G +PNV++Y++++ GLC+
Sbjct: 327 FAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCK 386

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G++  A  +   +    ++ + L Y++LI G   +        L + M  +G++ D  +
Sbjct: 387 EGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSL 446

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
              LI GL     + +A     +     L PN  I+ T+MD   +  + ++ V L   + 
Sbjct: 447 YGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIP 506

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              ++P+V+T+  LI G+   GS+  AI  F +M + GL P+V  Y+ +I G  K  ++S
Sbjct: 507 DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLS 566

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             +H+   M   G++ D  +Y  L++  +K+ +L  A  L  ++ + GL+ D+  Y   I
Sbjct: 567 KAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFI 626

Query: 601 CGYCSLN 607
            G+C++N
Sbjct: 627 SGFCNMN 633


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 219/425 (51%), Gaps = 5/425 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y +L+  L + G  ++ +  +  ++  G VPN  T   +L+ LC   +   A S+F  + 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  PNV ++S LI   C+  K+++A +L N M++    P+++ Y  L+ GL K G+LK
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  +L    + RG   D VV++ ++D +   GD+G A + ++ ML  G +P V +Y+ L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G  ++G       LF  +L +   P++ T+++L+DGFCK G + +   L+  M   G  
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V  + L+ G+       +A R   + +R  + P++  +N L+DG  +       +KL
Sbjct: 260 PDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  +    ++PD  +++ +I  +   G + +A ++F  M+  G  PD      ++ GL +
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           G+ ++    +F+ M +    P I  YN+L+  L K    D   ++F +LT+RG  PD+  
Sbjct: 380 GERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEI 439

Query: 596 YNTII 600
              I+
Sbjct: 440 SKVIL 444



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 192/393 (48%), Gaps = 40/393 (10%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N +L+ L  +G+  +    ++ +L  G  PN  T+  L+ + C+  + E+A  ++  M  
Sbjct: 21  NYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAA 80

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
               P++  YSILI GL +  ++ E  ELL                              
Sbjct: 81  QGCSPNVFSYSILIAGLCRGQKVDEAAELL------------------------------ 110

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
                + M++GG  PNV++Y  L+ GLC+ G+L EA  LF +++ R   P  + Y+ LID
Sbjct: 111 -----NEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           GF K G + + + L++ M+++G  P     + L++G       G     F   +R   +P
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+F FN L+DG C++    +  +LF+ M      PDV+++  L+RG+ S+G    A  L 
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLL 285

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M++ G+ PD+++Y+ +I G  K   +   + +F  + ++G+ PD   Y+ +++ L + 
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             + AA  +F  +   G  PD      ++ G C
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 173/359 (48%), Gaps = 40/359 (11%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
             ++++ L+    K  + +  +  YN M+    VP+   Y  L+  L +A R +E   + 
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
                RG+                      A Q        G  PNV SYSILI GLC+ 
Sbjct: 76  -----RGM----------------------AAQ--------GCSPNVFSYSILIAGLCRG 100

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
            ++ EA  L  +++    +P+++TY SL+ G CK GKL++   L+  M+ RG  PD VV 
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           ++LI+G      MG+A R F + +    IP +F +N+L+ G  R         LF  M  
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
               P++ T   L+ G    G +  A  LF +M   G  PDV++Y+ ++ G+        
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              + + M R+GV PDI  YN+L++   K   LD A+KLF ++   GLEPD  +Y+TII
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 192/433 (44%), Gaps = 51/433 (11%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           L+  L Q+   + A  VF  M  Q G + N F             YS LI    R  K+D
Sbjct: 58  LLRSLCQAQRFEEARSVFRGMAAQ-GCSPNVF------------SYSILIAGLCRGQKVD 104

Query: 130 ESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEF 183
           E+ E+   M D G    P++V    L+S L     + +   L   M  +G      VY  
Sbjct: 105 EAAELLNEMIDGG--HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++G  +KG +  A+ +  +++++G +P + T N +L      G+ G   SLF  +L  G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN+ TF+ L++ FCK   + +A +L+  M  +   PD++ Y+ L+ G+   G+  E  
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            LL   +  G+  D+V ++ ++D Y   G +  A++ +  +   G  P+  SYS +I  L
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+ G++  A  +F  ++     P       L+ G C+  +L +   L+  M+K       
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK------- 395

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
                             F+ V   LIP    +N LM   C+ KR+ D  ++F  +    
Sbjct: 396 ------------------FECV--PLIPE---YNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 484 IKPDVITHTVLIR 496
             PDV    V++ 
Sbjct: 433 FSPDVEISKVILE 445



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 186/404 (46%), Gaps = 22/404 (5%)

Query: 38  ILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQF 94
           +L +L +      A   F+       SPN+   + LI  L +    D A+ + ++M I  
Sbjct: 58  LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEM-IDG 116

Query: 95  GKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM 154
           G   N               Y  L+    ++GK+ E+V++F+ M   G      +   L+
Sbjct: 117 GHQPNVV------------TYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLI 164

Query: 155 SCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
                   +G+ Y+L   M  KG C+     Y  L++G  RKG       + + ++++G 
Sbjct: 165 DGFSKKGDMGEAYRLFEEMLEKG-CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           VPNI T N +L   C  G +  A  LF  +  +G  P+VV+++TL+   C + K  +A +
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQR 283

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L   M+   + PD++ Y+ILIDG  K+G L    +L       GL+ D   +S+++D   
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G VG A   +  M+  G  P+      L+ GLC+  RL E+C LF  ++     P + 
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIP 403

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            Y+ L+   CK+ +  D   ++  + +RG  PD  +  +++  L
Sbjct: 404 EYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 30/266 (11%)

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
           TY+ ML  G +PN  +Y  L++ LCQ  R  EA  +F  +  +   P++ +YS LI G C
Sbjct: 39  TYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLC 98

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           +  K+ +   L + MI  G +P                              N+  + +L
Sbjct: 99  RGQKVDEAAELLNEMIDGGHQP------------------------------NVVTYGSL 128

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           + G C++ +  + V LF  M      PD + + VLI G + +G +  A  LF +ML++G 
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P V TY++++ G  +         +FK M R G  P+I  +N LL+   K  ++  A +
Sbjct: 189 IPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHR 248

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCS 605
           LF ++   G  PD+++YNT++ G CS
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLMRGMCS 274



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 5/224 (2%)

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           L+Y+ L++   KSG+    +  Y++M+  G  P+      L+  L       +A   F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                  PN+F ++ L+ G CR ++  +  +L   M     +P+V+T+  L+ G+   G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L  A+ LF +M+ RG  PD + Y+ +I G  K  ++     +F+ M   G  P +  YN 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           LL+   ++        LF  +  +G  P+I T+N ++ G+C + 
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMG 241


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 156/529 (29%), Positives = 252/529 (47%), Gaps = 36/529 (6%)

Query: 95  GKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G       + RD  G  GC      Y+ L+  + R G++D +  +   M D G  L P+L
Sbjct: 164 GHRKEALSILRDMRG-AGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGG--LKPNL 220

Query: 150 V--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQ 203
           V    +++ +  +  +    K+   M  +G       Y  L+ G  + G    A  +  +
Sbjct: 221 VTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAE 280

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           + Q+G +P++VT   ++  +C  G +  A +L   +   G + N VTF+ LI+ FCK+  
Sbjct: 281 MTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 340

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L+ A      M +  + P ++ Y+ LI+G    GR+ E  ELL     +GLK DVV +S+
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 400

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++ AY    D   A +   +ML  G LP+ I+YS LI+ LC++ RL +A  LF  ++   
Sbjct: 401 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG 460

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DAL 438
           L+P   TY+SLIDG CK G +    SL+D M+K G+ PD V  S+LINGL       +A 
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 520

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVI------ 489
           +  F+      IP    ++ LM  CCR   LK     +K F + G+ N    V       
Sbjct: 521 QLLFKLYHEEPIPANTKYDALMH-CCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDR 579

Query: 490 -------THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
                   ++VLI G    G++  A+    QML+RG  P+  +  ++I GLF+   +   
Sbjct: 580 NWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEA 639

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             + + +       D      L+++ + E N+DA L +   +   GL P
Sbjct: 640 DQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 214/400 (53%), Gaps = 6/400 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G+VP+++  N +L  L  +  + +A   FD +L  G  PNV T++ LI A C     ++A
Sbjct: 111 GYVPSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             +   M      P+++ Y+ L+   F+AG +     L+   LD GLK ++V F+S+++ 
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G +  A + +D M+  G  P+ +SY+ L+ G C+ G   EA  +F ++  + + P 
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
           ++T++SLI   CK+G L    +L   M +RGL+ + V  + LI+     G + DAL    
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
              +  + P++  +N L++G C + R  +  +L   M    +KPDV+T++ +I       
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
              SA  L  QML++G+ PD ITYS++I  L + K +S    +FK M + G+ PD   Y 
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            L++   KE N++ AL L  ++   G+ PD++TY+ +I G
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLING 509



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 229/461 (49%), Gaps = 22/461 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+  L  +G  + A  + R +   G  PN+VT N ++      G++  A  L  ++
Sbjct: 152 TYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM 211

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G KPN+VTF++++N  CK  K+E A ++++ MM   L PD + Y+ L+ G  KAG  
Sbjct: 212 LDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCS 271

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   +      +G+  DVV F+S++      G++  AV    +M   G   N ++++ L
Sbjct: 272 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTAL 331

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C++G L +A      +   R++PS++ Y++LI+G+C  G++ +   L   M  +GL
Sbjct: 332 IDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 391

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KPD V  S +I+    +     A     Q +   ++P+   +++L+   C  KR +D   
Sbjct: 392 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHV 451

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    ++PD  T+T LI G   +G++  A+ L  +M+K G+ PDV+TYS +I+GL 
Sbjct: 452 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLS 511

Query: 535 K-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE------------CN---LDAAL 578
           K  + +     +FKL     + P    Y+ L++   K             C    ++ A 
Sbjct: 512 KSARAMEAQQLLFKLYHEEPI-PANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 570

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           K++  + DR    D   Y+ +I G+C   + +    F  Q+
Sbjct: 571 KVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQM 611



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 227/457 (49%), Gaps = 26/457 (5%)

Query: 171 RAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           R MRG G       Y  L+    R G ++ A  +   ++  G  PN+VT N ++  +C  
Sbjct: 174 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKA 233

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++ +A  +FD ++  G  P+ V+++TL+  +CK     +A  ++  M +  ++PD++ +
Sbjct: 234 GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF 293

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LI  + KAG L+    L+    +RGL+++ V F++++D +   G +  A+     M  
Sbjct: 294 TSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQ 353

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               P+V+ Y+ LI G C  GR+ EA  L  ++  + L+P ++TYS++I  +CK+     
Sbjct: 354 CRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHS 413

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            F L   M+++G+ PDA+  S LI  L     + DA   F   +++ L P+ F + +L+D
Sbjct: 414 AFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 473

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+       + L   M    + PDV+T++VLI G++       A  L F++      P
Sbjct: 474 GHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIP 533

Query: 522 DVITYSAIIHGLFKGKNISV-----GLHMFKLM-----------ERNGVAPDIAIYNVLL 565
               Y A++H   K +  SV     G  M  LM           +RN    D ++Y+VL+
Sbjct: 534 ANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNL-DGSVYSVLI 592

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +   +  N+  AL    Q+  RG  P+  +  ++I G
Sbjct: 593 HGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRG 629



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 87/176 (49%)

Query: 429 LINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
           L +  +  A RFF   +   + PN++ +N L+   C      + + +   M      P+V
Sbjct: 126 LSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNV 185

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+  L+      G +  A  L   ML  GL P+++T++++++G+ K   +     +F  
Sbjct: 186 VTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDE 245

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M R G+APD   YN L+    K      AL +F ++T +G+ PD++T+ ++I   C
Sbjct: 246 MMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMC 301



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/329 (19%), Positives = 118/329 (35%), Gaps = 93/329 (28%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  Y  +G++DE+ E+   M   G  L PD+V    ++S    +      ++L + 
Sbjct: 363 YNALINGYCMVGRMDEARELLHEMEAKG--LKPDVVTYSTIISAYCKNCDTHSAFELNQQ 420

Query: 173 MRGKG--------------FC-------------------------VYEFLMNGLLRKGV 193
           M  KG               C                          Y  L++G  ++G 
Sbjct: 421 MLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 480

Query: 194 IENAFHMHRQVIQRGFVPNIVT-------------------------------------- 215
           +E A  +H ++++ G +P++VT                                      
Sbjct: 481 VERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDA 540

Query: 216 ----CNK--------ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
               C K        +LK  C+ G +  A  ++  +L      +   +S LI+  C+   
Sbjct: 541 LMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGN 600

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           + KA   +  M++    P+      LI GLF+ G + E ++++   L+     D     +
Sbjct: 601 VMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKA 660

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           ++D  +  G+V   +     M   G LP+
Sbjct: 661 LIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 246/486 (50%), Gaps = 38/486 (7%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           S LI  +  + ++D +  + A +  +G  L P +V    L++ L       Q  +L   M
Sbjct: 137 SILINCFSHLQRVDLAFSVLAKIIKLG--LQPTIVTFTTLINWLCKVGKFAQAMELFDDM 194

Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +G       Y  ++NGL + G    A  + +++ + G  PN+VT + I+     + ++
Sbjct: 195 VARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRV 254

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  +F  + + G  P++ T+++LI   C  ++ ++A  L N M  ++++PD++ +++L
Sbjct: 255 NEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVL 314

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           +D + K G++ E   +L T  + G++ DVV +SS+M  Y    +V  A + +D M+  G 
Sbjct: 315 VDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGC 374

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V SY+ILI G C+  R+ EA  LF +++ + L P+ ++Y++LI G C+ G LR+  +
Sbjct: 375 KPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARN 434

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           L+ NM   G                               +PNLF ++ L+DG C+    
Sbjct: 435 LFKNMHTNGN------------------------------LPNLFTYSILLDGFCKQGYF 464

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
               +LF  M     KP+++ + +LI  +   G+L  A  LF ++  +GL P+   Y+ I
Sbjct: 465 GKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTI 524

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I+GL K   +   L  F+ ME +G  PD   YNV++   +   +   A++L G++ D+G 
Sbjct: 525 INGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGF 584

Query: 590 EPDIIT 595
             D+ T
Sbjct: 585 IADVGT 590



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 245/491 (49%), Gaps = 20/491 (4%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYY----KLCRAMRGKGFC-- 179
           ID+++  F +M  +     P ++Q  +L+S +V    +GQYY     L + M   G    
Sbjct: 78  IDDALASFNHM--LHRKPLPCIIQFTKLLSAIV---KMGQYYDTVISLTKQMELAGLSPN 132

Query: 180 --VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
                 L+N       ++ AF +  ++I+ G  P IVT   ++  LC  G+   A  LFD
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            ++  G +P+V T++T+IN  CK  +   A  L   M E    P+++ YS +ID   K  
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           R+ E  ++      +G+  D+  ++S++           A    + M +   +P++++++
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           +L+  +C++G++ EA G+   +    +EP ++TYSSL+ G+    ++ +   L+D MI +
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G KPD    ++LING      + +A + F + +   L PN   +NTL+ G C+L    + 
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             LF  M      P++ T+++L+ G   QG    A  LF  M      P+++ Y+ +I  
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           + K  N+     +F  +   G+ P+  IY  ++N L KE  LD AL+ F  + + G  PD
Sbjct: 493 MCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPD 552

Query: 593 IITYNTIICGY 603
            I+YN II G+
Sbjct: 553 EISYNVIIRGF 563



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 227/434 (52%), Gaps = 8/434 (1%)

Query: 179 CVYEF--LMNGLLRKG-VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           C+ +F  L++ +++ G   +    + +Q+   G  PNI T + ++       ++  A S+
Sbjct: 96  CIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSV 155

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
              ++ +G +P +VTF+TLIN  CK  K  +A +L++ M+     PD+  Y+ +I+GL K
Sbjct: 156 LAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCK 215

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G       LL    + G + +VV +S+++D++     V  A+  +  M   G  P++ +
Sbjct: 216 IGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFT 275

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI+GLC   +  EA  L  ++    + P ++T++ L+D  CK GK+ +   +   M 
Sbjct: 276 YNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMT 335

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G++PD V  S L+ G      + +A + F   +     P++F +N L++G C++KR  
Sbjct: 336 EMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRID 395

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  +LF  M    + P+ +++  LI G+   GSL  A  LF  M   G  P++ TYS ++
Sbjct: 396 EAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILL 455

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G  K         +F+ M+     P++ +YN+L++ + K  NL  A KLF +L  +GL+
Sbjct: 456 DGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQ 515

Query: 591 PDIITYNTIICGYC 604
           P+   Y TII G C
Sbjct: 516 PNAQIYTTIINGLC 529



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 187/386 (48%), Gaps = 31/386 (8%)

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL-EKAFQLYNLMMEMDLVPD 282
           C    I +A + F+ +L   P P ++ F+ L++A  K  +  +    L   M    L P+
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           +   SILI+      R+     +L   +  GL+  +V F+++++    +G   +A++ +D
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M+  G  P+V +Y+ +I GLC+ G    A GL  ++     +P+++TYS++ID   K  
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           ++ +   ++  M  +G+ PD                              +F +N+L+ G
Sbjct: 253 RVNEALDIFSYMKVKGISPD------------------------------IFTYNSLIQG 282

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C   +  +   L   M   NI PD++T  VL+  I  +G +S A  +   M + G+ PD
Sbjct: 283 LCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPD 342

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V+TYS++++G      +     +F  M   G  PD+  YN+L+N   K   +D A +LF 
Sbjct: 343 VVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFN 402

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNS 608
           ++  +GL P+ ++YNT+I G C L S
Sbjct: 403 EMIHQGLTPNNVSYNTLIHGLCQLGS 428



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 196/412 (47%), Gaps = 63/412 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I+++ +  +++E+++IF+YM   GI  SPD+                         
Sbjct: 241 YSTIIDSHRKDRRVNEALDIFSYMKVKGI--SPDIF------------------------ 274

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+ GL      + A  +  ++     +P+IVT N ++  +C  G++  A  
Sbjct: 275 -----TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQG 329

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +  +G +P+VVT+S+L+  +   +++ +A +L++ M+     PD+  Y+ILI+G  
Sbjct: 330 VLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYC 389

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  R+ E  +L    + +GL  + V +++++     +G +  A   +  M   G LPN+ 
Sbjct: 390 KVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLF 449

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +YSIL+ G C+QG   +A  LF  +     +P+L+ Y+ LID  CKSG LRD   L+  +
Sbjct: 450 TYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSEL 509

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIF-NTLMDGCCRLKRATDTV 473
             +GL+P+A + + +INGL  + L          L   L  F N   DGC          
Sbjct: 510 FVKGLQPNAQIYTTIINGLCKEGL----------LDEALEAFRNMEEDGC---------- 549

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                       PD I++ V+IRG       S A+ L  +M  +G   DV T
Sbjct: 550 -----------PPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 263/547 (48%), Gaps = 54/547 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   + NY R GK+ E+V++F  M       S      +M+ LV+     Q +K+   M+
Sbjct: 79  YVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMK 138

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN-IVTCNKILKRLCINGQI 229
            +G     C +   +    R      A  +   +  +G   N +V C  I      N Q+
Sbjct: 139 HEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQV 198

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  LF+ +L +G  P++ TF+ L++  CK+  L++  +L N +++  + P+L  ++I 
Sbjct: 199 -EAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIF 257

Query: 290 IDGLFKAGRLKEGNELLLTA-------LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           I GL + G L+  N  ++ A       +++GL+ D   +++++  Y  +G +  A +   
Sbjct: 258 IQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILK 317

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
                GF+P+  +Y  LI G+CQ G +  A  LF + L + L+PS++ Y++LI G  + G
Sbjct: 318 DAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQG 377

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
            +     L ++M K G+ PD    +L+INGL     + DA      ++    +P++F FN
Sbjct: 378 LVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFN 437

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           TL+DG C+  +  + + +   M  + + PDVIT+  ++ G+         +  F  ++++
Sbjct: 438 TLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEK 497

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD-------------------- 557
           G  P++ITY+ +I  L K + ++  L + + +   G+ PD                    
Sbjct: 498 GCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEA 557

Query: 558 ----------------IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
                           +A YN+++N   ++ ++D A KLF ++ D+G +PD  TY  +I 
Sbjct: 558 YQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMID 617

Query: 602 GYCSLNS 608
           G+C + +
Sbjct: 618 GFCKVGN 624



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 225/482 (46%), Gaps = 48/482 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY   M    RKG ++ A  +  ++      P+I + N I+  L   G    A  ++  +
Sbjct: 78  VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM 137

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+V TF+  I +FC+  +   A +L N M       + ++Y  +I G ++    
Sbjct: 138 KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQ 197

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  EL    L  G+   +  F+ +M      G +    +  +++L  G  PN+ +++I 
Sbjct: 198 VEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIF 257

Query: 360 IKGLCQQG-------RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD------ 406
           I+GLC++G       ++VEA     +++ + LEP   TY+++I G+ K GK++D      
Sbjct: 258 IQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILK 317

Query: 407 -----GF------------------------SLYDNMIKRGLKPDAVVCSLLINGLMGD- 436
                GF                        +L++  + +GLKP  V+ + LI GL    
Sbjct: 318 DAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQG 377

Query: 437 ----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
               AL+      +  + P+++ +N +++G C++   +D   L          PD+ T  
Sbjct: 378 LVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFN 437

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G   +  + +AI +   M   G+TPDVITY++I++GL K       +  FK++   
Sbjct: 438 TLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEK 497

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
           G  P+I  YN+L+  L K   +  AL L  ++ +RGL PD +++ T+I G+C+ N  L +
Sbjct: 498 GCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCN-NGDLDE 556

Query: 613 GY 614
            Y
Sbjct: 557 AY 558



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 222/483 (45%), Gaps = 52/483 (10%)

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLM 185
           E+ E+F  M  +GI+       +LM  L     + +  KL   +   G C     +   +
Sbjct: 199 EAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFI 258

Query: 186 NGLLRKGVIENAF--------HMHRQV-----------------------IQ-------- 206
            GL RKGV+E A         ++H+ V                       IQ        
Sbjct: 259 QGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD 318

Query: 207 ---RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
              +GFVP+  T   ++  +C +G I +A +LF+  L  G KP++V ++TLI    ++  
Sbjct: 319 AKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGL 378

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           + KA QL N M +  + PD+  Y+++I+GL K G + + N LL  A+ +G   D+  F++
Sbjct: 379 VLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNT 438

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D Y     +  A+   D M + G  P+VI+Y+ ++ GLC+  +  +    F  ++ + 
Sbjct: 439 LIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKG 498

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDAL 438
             P+++TY+ LI+  CK+ K+ +   L + +  RGL PD V    +I     NG + +A 
Sbjct: 499 CLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAY 558

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV-KLFMLMGMYNIKPDVITHTVLIRG 497
           + F +  +   I +      +M      K   D   KLF  MG     PD  T+ V+I G
Sbjct: 559 QLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDG 618

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
               G+++S      + ++ G  P + T+  +I+ L     +   + +  LM R GV P+
Sbjct: 619 FCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPE 678

Query: 558 IAI 560
             +
Sbjct: 679 AVV 681



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/429 (22%), Positives = 201/429 (46%), Gaps = 28/429 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  Y ++GKI ++  I       G          L+  +     +     L     
Sbjct: 296 YNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEAL 355

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           GKG      +Y  L+ GL ++G++  A  +   + + G  P+I T N ++  LC  G + 
Sbjct: 356 GKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVS 415

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A++L +  +  G  P++ TF+TLI+ +CK  K++ A  + + M    + PD+I Y+ ++
Sbjct: 416 DANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSIL 475

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL KA + ++  E     +++G   +++ ++ ++++      V  A+   + + N G +
Sbjct: 476 NGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLI 535

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP------SLLTYSSLIDGFCKSGKL 404
           P+ +S+  +I G C  G L EA  LF     RR+E       ++ TY+ +I+ F +   +
Sbjct: 536 PDPVSFGTVISGFCNNGDLDEAYQLF-----RRMEQQYRICHTVATYNIMINAFSEKLDM 590

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
                L+  M  +G  PD+    ++I+G      +     F  + + +  +P+L  F  +
Sbjct: 591 DMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRV 650

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           ++  C   R  + V +  LM    ++  V+   V+    A + ++++  ++   +LK+  
Sbjct: 651 INCLCVQHRVHEAVGIVHLM----VRTGVVPEAVVTIFDADKKAVAAPKIIVEDLLKKSH 706

Query: 520 TPDVITYSA 528
               ITY A
Sbjct: 707 ----ITYYA 711



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/258 (19%), Positives = 102/258 (39%), Gaps = 56/258 (21%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG 95
           N+IL  L K   P   ++ FK        PNI                            
Sbjct: 472 NSILNGLCKAAKPEDVMETFKMIMEKGCLPNIIT-------------------------- 505

Query: 96  KTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS 155
                              Y+ LIE+  +  K+ E++++   + + G+   P     ++S
Sbjct: 506 -------------------YNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVIS 546

Query: 156 CLVDSNSVGQYYKLCRAMRGK-----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
              ++  + + Y+L R M  +         Y  ++N    K  ++ A  +  ++  +G  
Sbjct: 547 GFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCD 606

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLL---VGPKPNVVTFSTLINAFCKEAKLEKA 267
           P+  T   ++   C   ++GN +S +D LL    +G  P++ TF  +IN  C + ++ +A
Sbjct: 607 PDSYTYRVMIDGFC---KVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEA 663

Query: 268 FQLYNLMMEMDLVPDLII 285
             + +LM+   +VP+ ++
Sbjct: 664 VGIVHLMVRTGVVPEAVV 681


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/478 (30%), Positives = 227/478 (47%), Gaps = 34/478 (7%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + LI  +  +G++  S  +   +  +G       +  LM  L     V +       +  
Sbjct: 49  NILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVA 108

Query: 176 KGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF +    Y  L+NGL + G    A  + R +  R   PN+V  N I+  LC +  +  
Sbjct: 109 QGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE 168

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L+  +   G  P+ +T++TLI  FC   +L  AF L + M+  ++ P + IY+ILI+
Sbjct: 169 AYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILIN 228

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G +KE   LL      G+K  VV +S++MD Y  +G+V  A Q +  M+  G  P
Sbjct: 229 ALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNP 288

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV SY+I+I GLC+  R+ EA  L  ++L + + P  +TY+SLIDG CKSG++    +L 
Sbjct: 289 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 348

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           + M  RG   D V                               + +L+D  C+ +    
Sbjct: 349 NEMHHRGQPADVVT------------------------------YTSLLDALCKNQNLDK 378

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              LFM M    I+P + T+T LI G+   G L +A  LF  +L +G   DV TY+ +I 
Sbjct: 379 ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMIS 438

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           GL K       L +   ME NG  P+   + +++  L ++   D A KL  ++  +GL
Sbjct: 439 GLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 220/414 (53%), Gaps = 5/414 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  + +Q+  +G   N VT N ++   C  GQ+  + S+   +L +G +P+ +T +TL+ 
Sbjct: 29  AISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMK 88

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C + +++K+   ++ ++      D + Y  L++GL K G  +   +LL    DR  + 
Sbjct: 89  GLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRP 148

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV++++++D       V  A   Y  M   G  P+ I+Y+ LI G C  G+L+ A  L 
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLL 208

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LM 434
            +++++ + P +  Y+ LI+  CK G +++  +L   M K G+KP  V  S L++G  L+
Sbjct: 209 DEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLV 268

Query: 435 GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           G+   A + F   V+M + PN++ +N +++G C+ KR  + + L   M   N+ PD +T+
Sbjct: 269 GEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTY 328

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             LI G+   G ++SA+ L  +M  RG   DV+TY++++  L K +N+     +F  M+ 
Sbjct: 329 NSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            G+ P +  Y  L++ L K   L  A +LF  L  +G   D+ TY  +I G C 
Sbjct: 389 RGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 442



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 232/441 (52%), Gaps = 9/441 (2%)

Query: 169 LCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           L + M  KG    F     L+N     G +  +F +  ++++ G+ P+ +T N ++K LC
Sbjct: 32  LSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLC 91

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
           + G++  +    D ++  G + + V++ TL+N  CK  +   A +L  ++ +    P+++
Sbjct: 92  LKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVV 151

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           +Y+ +IDGL K   + E  +L      RG+  D + +++++  +  +G +  A    D M
Sbjct: 152 MYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEM 211

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +     P V  Y+ILI  LC++G + EA  L   +    ++P ++TYS+L+DG+C  G++
Sbjct: 212 ILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEV 271

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
           ++   ++  M++ G+ P+    +++INGL     + +A+    + +   ++P+   +N+L
Sbjct: 272 QNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 331

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG C+  R T  + L   M       DV+T+T L+  +    +L  A  LF +M +RG+
Sbjct: 332 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P + TY+A+I GL KG  +     +F+ +   G   D+  Y V+++ L KE   D AL 
Sbjct: 392 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALA 451

Query: 580 LFGQLTDRGLEPDIITYNTII 600
           +  ++ D G  P+ +T+  II
Sbjct: 452 IKSKMEDNGCIPNAVTFEIII 472



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 206/401 (51%), Gaps = 5/401 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P I+  NKIL  L    Q   A SL   + + G + N VT + LIN FC   ++  +F 
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +   ++++   PD I  + L+ GL   G +K+        + +G ++D V + ++++   
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            IG+   AV+    + +    PNV+ Y+ +I GLC+   + EA  L+ ++  R + P  +
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           TY++LI GFC  G+L   FSL D MI + + P   + ++LIN L     + +A       
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            +  + P +  ++TLMDG C +    +  ++F  M    + P+V ++ ++I G+     +
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ L  +ML + + PD +TY+++I GL K   I+  L++   M   G   D+  Y  L
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 366

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L+ L K  NLD A  LF ++ +RG++P + TY  +I G C 
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK 407



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 136/270 (50%), Gaps = 31/270 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS L++ Y  +G++  + +IF  M  MG+  +P++                         
Sbjct: 258 YSTLMDGYCLVGEVQNAKQIFHAMVQMGV--NPNVYS----------------------- 292

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++NGL +   ++ A ++ R+++ +  VP+ VT N ++  LC +G+I +A +
Sbjct: 293 ------YNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 346

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G   +VVT+++L++A CK   L+KA  L+  M E  + P +  Y+ LIDGL 
Sbjct: 347 LMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLC 406

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K GRLK   EL    L +G  +DV  ++ ++      G    A+    +M + G +PN +
Sbjct: 407 KGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAV 466

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           ++ I+I+ L ++    +A  L  +++ + L
Sbjct: 467 TFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 81/155 (52%)

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N    N L++  C L +   +  +   +     +PD IT   L++G+  +G +  ++   
Sbjct: 44  NFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFH 103

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +++ +G   D ++Y  +++GL K       + + +++E     P++ +YN +++ L K+
Sbjct: 104 DKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKD 163

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             ++ A  L+ ++  RG+ PD ITY T+I G+C L
Sbjct: 164 KLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLL 198


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 253/519 (48%), Gaps = 21/519 (4%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVR----IGKIDE-SVEIFAYMSDMGIYLSPDLVQRLMSC 156
           RL  D  G + C+ SF   N V     +G     +  +F  M   G+  +      +M  
Sbjct: 160 RLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKA 219

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
           L   N V     L R M   G CV     Y+ L++ L ++  ++ A  +  ++   G  P
Sbjct: 220 LCMVNEVDNACLLLRDMTKHG-CVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPP 278

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           ++ T N ++   C   ++   + L D ++L G  PN +T+  L++  CK  ++++A  L 
Sbjct: 279 DVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL 338

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVG 330
           + +      P+++ ++ L++G  + GRL E    +   + + G   DV  FS++++    
Sbjct: 339 SKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCK 394

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G  G A++  + M   G  PN+ +Y+ILI G C++G+L EA  +  ++L +    + + 
Sbjct: 395 KGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVG 454

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           Y++LI   CK GK+ +   ++  M  +G KPD    + LI GL     M DAL  +   V
Sbjct: 455 YNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMV 514

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              +I N   FNTL+    R     + +KL   M       D IT+  LI+ +   G++ 
Sbjct: 515 LEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVE 574

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
             + LF +M+++GLTP +IT + +I+G      +   L   + M   G +PDI  YN L+
Sbjct: 575 KGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLI 634

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N L K   +  AL LF +L   G++PD ITYNT+IC  C
Sbjct: 635 NGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLC 673



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 263/543 (48%), Gaps = 31/543 (5%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSF--LIENYVRIGK 127
           ++ VL+  +   VAS+VF  M+               S G    DY+F  +++    + +
Sbjct: 181 VLDVLVVGNCPSVASNVFYDML---------------SKGVSPNDYTFGLVMKALCMVNE 225

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEF 183
           +D +  +   M+  G   +  + Q L+  L   + V +  KL   M   G       +  
Sbjct: 226 VDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNT 285

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++ G  R   +     +  ++I +GF PN +T   ++  LC   +I  A +L   +    
Sbjct: 286 VIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV---- 341

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           P PNVV F+TL+N F +  +L +A   +Y+ M+    VPD+  +S L++GL K G     
Sbjct: 342 PGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSA 401

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            EL+     +G K ++  ++ ++D +   G +  A      ML  GF  N + Y+ LI  
Sbjct: 402 LELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISA 461

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC+ G++ EA  +FG++  +  +P + T++SLI G C+  ++ D  +LY +M+  G+  +
Sbjct: 462 LCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIAN 521

Query: 423 AVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
           +V  + LI+     G + +AL+     +      +   +N L+   C+       + LF 
Sbjct: 522 SVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFE 581

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    + P +IT  +LI G  + G + +A+     M+ RG +PD++TY+++I+GL K  
Sbjct: 582 EMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRG 641

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I   L++F+ ++  G+ PD   YN L+  L +E   D A  L  +  + G  P+ +T+N
Sbjct: 642 RIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWN 701

Query: 598 TII 600
            ++
Sbjct: 702 ILV 704



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 237/492 (48%), Gaps = 30/492 (6%)

Query: 59  HNCVSSPNIAQ-LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD--- 114
           H CV +  I Q LI  L + D  D A  + ++M +                   GC    
Sbjct: 239 HGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFL------------------MGCPPDV 280

Query: 115 --YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
             ++ +I  + R+ ++ E  ++   M   G   +      LM  L  +  + +   L   
Sbjct: 281 NTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSK 340

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFH-MHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           + G     +  L+NG +R G +  A   ++ ++I  G+VP++ T + ++  LC  G  G+
Sbjct: 341 VPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGS 400

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L + +   G KPN+ T++ LI+ FCK+ +LE+A  +   M+      + + Y+ LI 
Sbjct: 401 ALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALIS 460

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G++ E  ++      +G K D+  F+S++     + ++  A+  Y  M+  G + 
Sbjct: 461 ALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIA 520

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N ++++ LI    ++G + EA  L   +L R      +TY+ LI   CK+G +  G  L+
Sbjct: 521 NSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLF 580

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + MI++GL P  + C++LING      + +AL F    +     P++  +N+L++G C+ 
Sbjct: 581 EEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKR 640

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  + + LF  +    I+PD IT+  LI  +  +G+   A  L ++ ++ G  P+ +T+
Sbjct: 641 GRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTW 700

Query: 527 SAIIHGLFKGKN 538
           + +++   K  N
Sbjct: 701 NILVYNFGKQSN 712



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/563 (24%), Positives = 252/563 (44%), Gaps = 53/563 (9%)

Query: 51  AIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGD 110
           +++ FKW        +   + ++L+          V D++++Q  +      +FR+SL  
Sbjct: 87  SMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEG---IVFRESL-- 141

Query: 111 FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR---LMSCLVDSNSVGQYY 167
               +  +++ Y R G   ++  +   M   G+Y      +    ++  LV  N      
Sbjct: 142 ----FILIMKYYGRAGLPGQATRLLLDMK--GVYCCEPSFRSYNVVLDVLVVGNCPSVAS 195

Query: 168 KLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
            +   M  KG       +  +M  L     ++NA  + R + + G VPN +    ++  L
Sbjct: 196 NVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDAL 255

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
               ++  A  L + + L+G  P+V TF+T+I  FC+  ++ +  +L + M+     P+ 
Sbjct: 256 SKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPND 315

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYD 342
           + Y  L+ GL K  R+ E   LL     +    +VV F+++++ +V  G +  A    YD
Sbjct: 316 MTYGYLMHGLCKTCRIDEAQALL----SKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYD 371

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           +M+N G++P+V ++S L+ GLC++G    A  L   +  +  +P+L TY+ LIDGFCK G
Sbjct: 372 KMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKG 431

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           +L +   +   M+ +G   + V                               +N L+  
Sbjct: 432 QLEEAGLILREMLTKGFSLNTVG------------------------------YNALISA 461

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+  +  + + +F  M     KPD+ T   LI G+     +  A+ L+  M+  G+  +
Sbjct: 462 LCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIAN 521

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +T++ +IH   +   I   L +   M   G   D   YN L+  L K   ++  L LF 
Sbjct: 522 SVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFE 581

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
           ++  +GL P IIT N +I G+C+
Sbjct: 582 EMIRKGLTPSIITCNILINGFCT 604



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 168/351 (47%), Gaps = 16/351 (4%)

Query: 269 QLYNLMMEMDLV----PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           Q   L+++M  V    P    Y++++D L         + +    L +G+  +   F  V
Sbjct: 157 QATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLV 216

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           M A   + +V  A      M   G +PN + Y  LI  L ++ R+ EA  L  ++ +   
Sbjct: 217 MKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGC 276

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRF 440
            P + T++++I GFC+  ++ +G  L D MI +G  P+ +    L++GL      D  + 
Sbjct: 277 PPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQA 336

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
               V     PN+  FNTL++G  R   L  AT  V   M+   Y   PDV T + L+ G
Sbjct: 337 LLSKVPG---PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGY--VPDVFTFSTLVNG 391

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +  +G   SA+ L   M  +G  P++ TY+ +I G  K   +     + + M   G + +
Sbjct: 392 LCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLN 451

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
              YN L++ L K   +  AL +FG+++ +G +PDI T+N++I G C ++ 
Sbjct: 452 TVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDE 502



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 71/136 (52%)

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L  + G+Y  +P   ++ V++  +      S A  +F+ ML +G++P+  T+  ++  L 
Sbjct: 162 LLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALC 221

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +     + + M ++G  P+  IY  L++ L K   +D ALKL  ++   G  PD+ 
Sbjct: 222 MVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVN 281

Query: 595 TYNTIICGYCSLNSCL 610
           T+NT+I G+C LN  L
Sbjct: 282 TFNTVIYGFCRLNRVL 297


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 217/434 (50%), Gaps = 15/434 (3%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+  L R       + +  ++I+ G V     CN +L  L   G     + L + ++ + 
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLM--------MEMDLVPDLIIYSILIDGLFK 295
            +PNVVTF  LIN  CK  +++ A ++   M        + + + PD++IY+ LIDGL K
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 296 AGRLKEGNELLLTALD-RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            GR +EG  L+      +G   D + ++ ++D +   G++ +  + +D M   G  PNV+
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV 455

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           + + L+ G+C+ GR+  A   F +   R ++   +TY++LI+ FC          L++ M
Sbjct: 456 TVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM 515

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           +K G  PDA+V   LI+G      M DA     +  ++ + P+   +NTL+ G CR  + 
Sbjct: 516 LKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF 575

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
               ++   M    +KPD IT+  LI   +  G L  A  +  +M+K G+ P V TY A+
Sbjct: 576 HRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAV 635

Query: 530 IHGLFKGKNISVGLHMFKLMER-NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           I+      N +  + +FK M+  + V P+  IYN+L+N L K   + +A+ L   +   G
Sbjct: 636 INAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWG 695

Query: 589 LEPDIITYNTIICG 602
           + P+  TYN I  G
Sbjct: 696 VTPNTTTYNAIFKG 709



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 143/588 (24%), Positives = 256/588 (43%), Gaps = 76/588 (12%)

Query: 49  TPAIQFFKW-THNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDS 107
           + A++F  +  +N  SSP+   L+    Q+        +F+    +     N  RL++ S
Sbjct: 97  SQALKFLNYLQNNSPSSPDTQSLLSYTFQA--------IFELAFCEPDSNANLSRLYKTS 148

Query: 108 ----LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL-MSCLVDSNS 162
               +       SFL+    R   ++ES+ +F   +D+   +    ++ + +S L+ S  
Sbjct: 149 KELNIPLTVNAASFLLRASGRSELVEESLILF---NDLDPSVKNTYLRNVWLSILLRSGR 205

Query: 163 VGQYYKL------------CRAMRGKGFCVYEFLM-----NGLLRKGVIEN---AFHMHR 202
           V    K+            CR     G  ++ FL+       LL +  I N    F  H 
Sbjct: 206 VKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHG 265

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            +I   ++  ++T      RLC N +      LF  ++ +G        ++L+    +E 
Sbjct: 266 VLISSFWMGRLIT------RLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREG 319

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
              +  +L   M+EMD+ P+++ + ILI+ + K  R+ +  E+L                
Sbjct: 320 NFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVL---------------- 363

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
             M      G +  +V+           P+V+ Y+ LI GLC+ GR  E  GL  ++  +
Sbjct: 364 EKMSGGKESGGISVSVE-----------PDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQ 412

Query: 383 R-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           +   P  +TY+ LIDGFCK+G++  G  L+D M K G+ P+ V  + L+ G+     +  
Sbjct: 413 KGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSS 472

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A+ FF ++ R  +  +   +  L++  C +      ++LF  M      PD I +  LI 
Sbjct: 473 AVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLIS 532

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G +  G ++ A  +  ++ K G+ PD + Y+ +I G  +         M K ME  G+ P
Sbjct: 533 GFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKP 592

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           D   YN L+    K  +L  A K+  ++   G+ P + TY  +I  YC
Sbjct: 593 DTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYC 640



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/470 (22%), Positives = 216/470 (45%), Gaps = 19/470 (4%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG-- 175
           LI    R  K +   ++F  M  +G  L       L++ L    +  +  +L   M    
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 176 --KGFCVYEFLMNGLLRKGVIENAFHMHRQV--------IQRGFVPNIVTCNKILKRLCI 225
                  +  L+N + +   +++A  +  ++        I     P++V  N ++  LC 
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 226 NGQIGNASSLFDVLL-LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
            G+      L + +    G  P+ +T++ LI+ FCK  ++EK  +L++ M +  + P+++
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV 455

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
             + L+ G+ + GR+       + A  RG+K D V ++++++A+  + +  +A++ ++ M
Sbjct: 456 TVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM 515

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           L  G  P+ I Y  LI G  Q GR+ +A  +  ++    + P  + Y++LI GFC++ K 
Sbjct: 516 LKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF 575

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
              F +   M + GLKPD +  + LI     NG +  A +   + ++  ++P +  +  +
Sbjct: 576 HRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAV 635

Query: 460 MDGCCRLKRATDTVKLFMLM-GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++  C      + +++F  M     + P+ + + +LI  +     + SA+ L   M   G
Sbjct: 636 INAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWG 695

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           +TP+  TY+AI  GL   K++         M  +   PD     +L   L
Sbjct: 696 VTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWL 745



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 195/434 (44%), Gaps = 46/434 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSD------MGIYLSPDLVQRLMSCLVDS-NSVGQYY 167
           +  LI +  +  ++D+++E+   MS       + + + PD+V  + + L+D    VG+  
Sbjct: 343 FGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVV--IYNTLIDGLCKVGRQQ 400

Query: 168 K---LCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
           +   L   MR +  C      Y  L++G  + G IE    +  ++ + G  PN+VT N +
Sbjct: 401 EGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTL 460

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  +C  G++ +A + F      G K + VT++ LINAFC     EKA +L+N M++   
Sbjct: 461 VGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGC 520

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            PD I+Y  LI G  +AGR+ + + +L      G++ D V +++++  +       R  +
Sbjct: 521 SPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFE 580

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
               M   G  P+ I+Y+ LI    + G L  A  +  +++   + P++ TY ++I+ +C
Sbjct: 581 MLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYC 640

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
            +G   +   ++ +M      P                             PN  I+N L
Sbjct: 641 LNGNGNEAMEIFKDMKAASKVP-----------------------------PNTVIYNIL 671

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           ++  C+  +    V L   M ++ + P+  T+  + +G+  +  L        +M++   
Sbjct: 672 INSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHAC 731

Query: 520 TPDVITYSAIIHGL 533
            PD IT   +   L
Sbjct: 732 NPDYITMEILTEWL 745



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 151/328 (46%), Gaps = 39/328 (11%)

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L +  +   G +L    +  G  L+    +S++      G+  R  +  ++M+   
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQV--------LIRRLEPSLLTYSSLIDGFCK 400
             PNV+++ ILI  +C+  R+ +A  +  ++        +   +EP ++ Y++LIDG CK
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 401 SGKLRDGFSLYDNM-IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
            G+ ++G  L + M  ++G  PD +                               +N L
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTIT------------------------------YNCL 425

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG C+        +LF  M    + P+V+T   L+ G+   G +SSA+  F +  +RG+
Sbjct: 426 IDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGM 485

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             D +TY+A+I+      N    + +F  M ++G +PD  +Y  L++   +   +  A  
Sbjct: 486 KGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASF 545

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +  +L   G+ PD + YNT+I G+C  N
Sbjct: 546 VLAELKKLGIRPDTVCYNTLIGGFCRTN 573



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 9/229 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y  LI  + + G++ ++  + A +  +GI   PD V    L+     +N   + +++ + 
Sbjct: 527 YYTLISGFSQAGRMADASFVLAELKKLGI--RPDTVCYNTLIGGFCRTNKFHRVFEMLKE 584

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  L+    + G ++ A  + R++I+ G VP + T   ++   C+NG 
Sbjct: 585 MEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGN 644

Query: 229 IGNASSLF-DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
              A  +F D+       PN V ++ LIN+ CK  K++ A  L   M    + P+   Y+
Sbjct: 645 GNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYN 704

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
            +  GL     L++  E +   ++     D +    + +    +G++ R
Sbjct: 705 AIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIER 753


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 231/456 (50%), Gaps = 12/456 (2%)

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           L R +R  G        N +L +  ++ A  + + +  +    N+ + N +LK LC  G+
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRLPLDEAIELFQGLPDK----NVCSYNILLKVLCGAGR 277

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  LFD +      P+VVT+  LI+ +C   +LE A +L + M+   + P+  +Y+ 
Sbjct: 278 VEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTS 334

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++  L   GR+ +   ++   +   + LD  V+++V+  +   GD+  A + +D M   G
Sbjct: 335 VVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKG 394

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              + ++Y+ LI GLC+ G L EA  +  ++L RRL+   +TY+ L+DG+CK GK+ + F
Sbjct: 395 LATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAF 454

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +++ M++RG+ P+ V  + L +GL   GD   A     +     L  N   +N+L++G 
Sbjct: 455 QVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGL 514

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+       ++    M    +KPDV T+T LI  +   G L  A  L  +ML  G+ P +
Sbjct: 515 CKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTI 574

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY+ +++G      +  G  + + M    + P+   YN L+       N+ +  +++  
Sbjct: 575 VTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKG 634

Query: 584 LTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           +  R +EP+  TYN +I G+C   S     YF +++
Sbjct: 635 MCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEM 670



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 230/476 (48%), Gaps = 34/476 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI  Y  +G+++ +V++   M   G+  +  +   +++ L D   V     +   M 
Sbjct: 297 YGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMV 356

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                    VY  +++G   KG + +A     ++ ++G   + VT   ++  LC  G++ 
Sbjct: 357 HHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELK 416

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +   +L      + VT++ L++ +CK  K+ +AFQ++N M++  + P+++ Y+ L 
Sbjct: 417 EAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALS 476

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K G ++  NELL    ++GL+L+   ++S+++     G + +A++T   M   G  
Sbjct: 477 DGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLK 536

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +Y+ LI  LC+ G L  A  L  ++L   ++P+++TY+ L++GFC SG++  G  L
Sbjct: 537 PDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKL 596

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            + M+++ + P+A                                +N+LM   C      
Sbjct: 597 LEWMLEKNIHPNATT------------------------------YNSLMKQYCIGNNMK 626

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
            T +++  M   N++P+  T+ +LI+G     S+  A     +M+++G      +YSA+I
Sbjct: 627 STTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALI 686

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
             L K K       +F  M + G   +  +YN  ++    E NL+A L L  +L +
Sbjct: 687 RLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVE 742



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 228/477 (47%), Gaps = 12/477 (2%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-YEFLMN 186
           +DE++E+F  + D  +  S ++   L+  L  +  V    +L   M      V Y  L++
Sbjct: 247 LDEAIELFQGLPDKNV-CSYNI---LLKVLCGAGRVEDARQLFDEMASPPDVVTYGILIH 302

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           G    G +ENA  +   ++ RG  PN      ++  LC  G++ +A ++ + ++      
Sbjct: 303 GYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVIL 362

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           +   ++T+++ FC +  L  A + ++ M    L  D + Y+ LI+GL +AG LKE  ++L
Sbjct: 363 DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVL 422

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              L R L +D V ++ ++D Y   G +  A Q ++ M+  G  PNV++Y+ L  GLC+Q
Sbjct: 423 QEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQ 482

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G +  A  L  ++  + LE +  TY+SLI+G CK+G L        +M   GLKPD    
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + LI+ L     +  A     + +   + P +  +N LM+G C   R     KL   M  
Sbjct: 543 TTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLE 602

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
            NI P+  T+  L++      ++ S   ++  M  R + P+  TY+ +I G  K +++  
Sbjct: 603 KNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKE 662

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL--EPDIITY 596
             +    M   G     + Y+ L+ +L K+     A KLF  +   G   EPD+  +
Sbjct: 663 AQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 290/616 (47%), Gaps = 62/616 (10%)

Query: 2   LLKFKNLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTN-NPTPAIQFFKW-TH 59
           LLK  +L+    S++   C E   H+S  +F+  +  LA  +K+N NP  A+ FF + + 
Sbjct: 57  LLKRVSLILSNPSLDCAKCKELVPHLSPQEFD--SCFLA--LKSNVNPKTALNFFHFVSE 112

Query: 60  NC---VSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS 116
            C    ++ +   LIH+L+ +D+   A  +  +++   GK   F+    +S         
Sbjct: 113 TCKFRFTARSYCVLIHLLVGNDLLSPARLLLIRLID--GKVPAFYARNFES--------- 161

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
                           EI   M+D  +   P +  ++   LV   S  Q+  L     G 
Sbjct: 162 -------------RHFEIAQIMADFNLVFEPVIGVKIADLLVHVYST-QFKHL-----GF 202

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           GF    F +                  + ++G  P++ TC  +L  L    ++  +  ++
Sbjct: 203 GFAADVFSL------------------LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVY 244

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           D + L G  P+V  FST+INAFCK  + + A  L++ M ++ + P+++ Y+ +I GL K+
Sbjct: 245 DFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKS 304

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GRL E        +   +   ++ +S  ++  + +  +  A      M   GF+PN + Y
Sbjct: 305 GRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVY 364

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI G C+ G + EA  +   +L + + P+ +T +SLI GFCKS ++    ++ + MI 
Sbjct: 365 NTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIG 424

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           RGL  +    S++IN L        AL F  + +   L PN  +  TL+ G C+  +  +
Sbjct: 425 RGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGE 484

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            V+L+  +      P+++T   LI G+   G++   + L   ML+RGL  D ITY+ +I 
Sbjct: 485 AVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLIS 544

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G  K   +  G  + + M + G+ PDI  +N+LL+ L     +D A +L+ +    G  P
Sbjct: 545 GCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVP 604

Query: 592 DIITYNTIICGYCSLN 607
           ++ TY  +I GYC  N
Sbjct: 605 NVYTYGVMIDGYCKAN 620



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 254/503 (50%), Gaps = 13/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYY----K 168
           +S +I  + +  + D+++ +F+ M  +G+  +P++V    ++  L  S  + + Y    K
Sbjct: 259 FSTMINAFCKGHREDDAIGLFSKMEKLGV--APNVVTYNNIIHGLCKSGRLDEAYRFKEK 316

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + +         Y   +NGL++   I+ A  + +++ + GFVPN V  N ++   C  G 
Sbjct: 317 MVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGN 376

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  + D +L  G  PN VT ++LI  FCK  ++ +A  +   M+   L  +   +S+
Sbjct: 377 ISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSM 436

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+ L    R       +   L R L+ +  + ++++      G  G AV+ + R+L  G
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG 496

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F+PN+++ + LI GLC+ G + E   L   +L R L    +TY++LI G CK GK+++GF
Sbjct: 497 FVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGF 556

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L + M+K+G++PD    +LL++GL     + +A R + +  +   +PN++ +  ++DG 
Sbjct: 557 ELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGY 616

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +  +   L   +    ++ + + +  LIR     G++++A  L   M  RG+    
Sbjct: 617 CKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSC 676

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TYS+++HGL     +    H+   M + G+ P++  Y  ++    K   ++    +  +
Sbjct: 677 ATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQE 736

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           ++   + P+  TY  +I G+C L
Sbjct: 737 MSSHNIHPNKFTYTIMIDGFCKL 759



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 229/492 (46%), Gaps = 34/492 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y ++G I E+++I   M   GI  +   +  L+     S+ +GQ   +   M 
Sbjct: 364 YNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMI 423

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G+G  +    +  ++N L  K     A H  R+++ R   PN      ++  LC  G+ G
Sbjct: 424 GRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQG 483

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L+  LL  G  PN+VT + LI+  CK   +++  +L   M+E  LV D I Y+ LI
Sbjct: 484 EAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLI 543

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K G++KEG EL    + +G++ D+  F+ ++        +  A + +      G++
Sbjct: 544 SGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYV 603

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV +Y ++I G C+  ++ E   L  +++ ++LE + + Y+SLI  +C +G +   F L
Sbjct: 604 PNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRL 663

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            D+M  RG+    + C+                            +++LM G C +    
Sbjct: 664 RDDMKSRGV---LLSCA---------------------------TYSSLMHGLCNIGLVD 693

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D   L   M    + P+V+ +T +I G +  G ++   ++  +M    + P+  TY+ +I
Sbjct: 694 DAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMI 753

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G  K         +   M   G+ PD   YN   N L KE  ++ A K+  +++   + 
Sbjct: 754 DGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVC 813

Query: 591 PDIITYNTIICG 602
            D ITY T+I G
Sbjct: 814 LDEITYTTLIDG 825



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 179/365 (49%), Gaps = 13/365 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRG 175
           L+    + GK  E+VE++  +  +G    P++V    L+  L  + ++ +  KL R M  
Sbjct: 472 LVSGLCKAGKQGEAVELWCRL--LGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLE 529

Query: 176 KGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +G       Y  L++G  ++G ++  F +  +++++G  P+I T N +L  LC   +I  
Sbjct: 530 RGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDE 589

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           AS L+      G  PNV T+  +I+ +CK  K+E+   L N ++   L  + ++Y+ LI 
Sbjct: 590 ASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIR 649

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
                G +     L      RG+ L    +SS+M     IG V  A    D M   G LP
Sbjct: 650 AYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLP 709

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV+ Y+ +I G  + G++ +   +  ++    + P+  TY+ +IDGFCK GK ++   L 
Sbjct: 710 NVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLL 769

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + M ++G+ PDAV  +   NGL     + +A +   +     +  +   + TL+DGC + 
Sbjct: 770 NEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQP 829

Query: 467 KRATD 471
             AT+
Sbjct: 830 STATN 834


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 216/430 (50%), Gaps = 9/430 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++  L R+  + +A      +++ G+ P+  T N ++   C   Q+  A  LFD +
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            L G   +VV+++ LI  FC+  ++++A +L+    EMD  PD+ +Y+ L+ GL KAGR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFG---EMDQ-PDMHMYAALVKGLCKAGRG 128

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +EG  +L    + G +     +++V+D          A +    M   G  P V++ + +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I   C++GR+ +A  +   + +R  +P++ TY++L+ GFC  GK+    +L + M   G+
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 420 KPDAVVCSLLINGLMGDA-LRFFFQSVRMT----LIPNLFIFNTLMDGCCRLKRATDTVK 474
            PDAV  +LLI G   D  +   F+ +R+     LI + + +N L++  C+  R      
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  +    IKP+ +T   LI G+   G +  A     +M+  G TPD  TYS+ I  L 
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K    GL     M +  V P    Y ++++ L+KE N     + +G++   G  PD++
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVV 428

Query: 595 TYNTIICGYC 604
           TY T +  YC
Sbjct: 429 TYTTSMRAYC 438



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/598 (23%), Positives = 265/598 (44%), Gaps = 46/598 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
           NA++ +L +  +   A+++          P+      LI    +++  DVA  +FDKM +
Sbjct: 15  NAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 74

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
                    R F   +      Y+ LIE +   G+IDE+VE+F  M    +++   LV+ 
Sbjct: 75  ---------RGFAQDV----VSYAALIEGFCETGRIDEAVELFGEMDQPDMHMYAALVKG 121

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L  C       G    + R M+  G+      Y  +++    +   + A  M +++ ++G
Sbjct: 122 L--CKAGRGEEGLL--MLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKG 177

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             P +VTC  ++   C  G++ +A  + +++ L G KPNV T++ L+  FC E K+ KA 
Sbjct: 178 LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAM 237

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            L N M    + PD + Y++LI G    G ++    LL      GL  D   ++++++A 
Sbjct: 238 ALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINAL 297

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G   +A   +D +   G  PN ++++ LI GLC+ G++  A     +++     P  
Sbjct: 298 CKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDT 357

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQ 443
            TYSS I+  CK    ++G S    M+++ +KP  V  +++I+ L+     G   R + +
Sbjct: 358 YTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGE 417

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            V     P++  + T M   C   R  +   + M M    +  D + +  L+ G AS G 
Sbjct: 418 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQ 477

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIH-----------------GLFKGKNISVGLHMF 546
              A+ +  QM      P+  TY  ++                  G++K   ++    +F
Sbjct: 478 TDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 537

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +M++N   P+   Y+ +L    ++   + A  L   + +  +  +   Y  ++  +C
Sbjct: 538 DVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFC 595



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 176/368 (47%), Gaps = 19/368 (5%)

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           T++ +I + C+ A L  A +  +LM+     PD   ++ LI G  +  ++    +L    
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
             RG   DVV ++++++ +   G +  AV+ +  M      P++  Y+ L+KGLC+ GR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGR- 127

Query: 370 VEACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
               G  G +++RR++     PS   Y++++D  C   K ++   +   M ++GL P  V
Sbjct: 128 ----GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVV 183

Query: 425 VCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
            C+ +IN     G M DALR           PN++ +N L+ G C   +    + L   M
Sbjct: 184 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM 243

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
            +  + PD +T+ +LIRG    G + SA  L   M   GL  D  TY+A+I+ L K    
Sbjct: 244 RVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 303

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                +F  +E  G+ P+   +N L+N L K   +D A K   ++   G  PD  TY++ 
Sbjct: 304 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSF 363

Query: 600 ICGYCSLN 607
           I   C + 
Sbjct: 364 IEHLCKMK 371



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/505 (22%), Positives = 212/505 (41%), Gaps = 26/505 (5%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +I  Y + G++ +++ +   M   G   +      L+    +   V +   L   MR  G
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L+ G    G IE+AF + R +   G + +  T N ++  LC +G+   A 
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           SLFD L   G KPN VTF++LIN  CK  K++ A++    M+     PD   YS  I+ L
Sbjct: 308 SLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHL 367

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K    +EG   +   L + +K   V ++ V+   +   + G   +T+  M++ G  P+V
Sbjct: 368 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 427

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+  ++  C +GRL EA  +  ++    +    + Y++L+DG    G+     S+   
Sbjct: 428 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 487

Query: 414 MIKRGLKPDAVVCSLLINGL----------------------MGDALRFFFQSVRMTLIP 451
           M      P+     +L+  L                      + D    F    +   +P
Sbjct: 488 MTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLP 547

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N   ++++++G     R  +   L  LM   +I  +   +T L+           A +L 
Sbjct: 548 NSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLV 607

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             M++ G  P +++Y  ++ GL           +F        +PD  ++ V+++ LIK+
Sbjct: 608 CSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 667

Query: 572 CNLDAALKLFGQLTDRGLEPDIITY 596
            + D + ++   L      P   TY
Sbjct: 668 GHSDISREMIIMLERMNCRPSHQTY 692


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 205/409 (50%), Gaps = 30/409 (7%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+NGL + G  + A  + R+   +   P++V  N I+  +C +  + +A  L+   +
Sbjct: 301 YGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKV 360

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                P+V T++ LI+ FC   KL+ A  L+N M   +++PD+  +SIL+DG  K G +K
Sbjct: 361 SKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIK 420

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   +L   + + +K DVV +SS+MD Y  + +V +A   ++ M + G   NV SY+I+I
Sbjct: 421 EAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMI 480

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+   + EA  LF ++  +++ P ++TYSSLIDG CKSG++     L D M  RG +
Sbjct: 481 NGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQ 540

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           PD +                               +N+++D  C+       + L   + 
Sbjct: 541 PDIIT------------------------------YNSILDALCKKHHVDKAITLLTKLK 570

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              I+PD+ T+T+L++G+   G L  A  +F  +L +G   DV  Y+ +I G        
Sbjct: 571 GQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFD 630

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
             L +   ME NG  PD   Y +++  L ++   D A KL  ++  RGL
Sbjct: 631 EALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 196/367 (53%), Gaps = 5/367 (1%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G +P+ +T +T I  FC + ++ +A   ++ ++ M    D + Y  LI+GL K G  K  
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            ELL     + ++ DVV++++++D       V  A   Y   ++    P+V +Y+ LI G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C  G+L +A  LF ++  + + P + T+S L+DGFCK G +++  ++   M+K+ +KPD
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  S L++G      +  A   F       +  N+  +N +++G C++K   + +KLF 
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I PDVIT++ LI G+   G +S A+ L  +M  RG  PD+ITY++I+  L K  
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKH 557

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           ++   + +   ++  G+ PD+  Y +L+  L +   L+ A K+F  L  +G   D+  Y 
Sbjct: 558 HVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT 617

Query: 598 TIICGYC 604
            +I G+C
Sbjct: 618 VMIQGFC 624



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 215/403 (53%), Gaps = 5/403 (1%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++++ G+ P+ +T    +K  C+ GQI  A    D ++ +G   + V++ TLIN  CK  
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           + + A +L        + PD+++Y+ +IDG+ K   + +  +L    + + +  DV  ++
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++  +  +G +  A+  +++M +   +P+V ++SIL+ G C+ G + EA  +   ++ +
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDA 437
            ++P ++TYSSL+DG+C   ++    S+++ M  RG+  +    +++ING     ++ +A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           ++ F +     + P++  +++L+DG C+  R +  ++L   M     +PD+IT+  ++  
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +  +  +  AI L  ++  +G+ PD+ TY+ ++ GL +   +     +F+ +   G   D
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +  Y V++     +   D AL L  ++ + G  PD  TY  II
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 655



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 210/443 (47%), Gaps = 38/443 (8%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK- 176
            I+ +   G+I +++     +  MG +L       L++ L          +L R   GK 
Sbjct: 269 FIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKL 328

Query: 177 ---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                 +Y  +++G+ +   + +AF ++ + + +   P++ T N ++   CI G++ +A 
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            LF+ +      P+V TFS L++ FCK+  +++A  +  +MM+  + PD++ YS L+DG 
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
                + +   +  T   RG+  +V  ++ +++ +  I  V  A++ +  M +    P+V
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           I+YS LI GLC+ GR+  A  L  ++  R  +P ++TY+S++D  CK   +    +L   
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK 568

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           +  +G++PD    ++L+ GL                              C+  +  D  
Sbjct: 569 LKGQGIRPDMNTYTILVKGL------------------------------CQSGKLEDAR 598

Query: 474 KLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
           K+F  +L+  YN+  DV  +TV+I+G   +G    A+ L  +M + G  PD  TY  II 
Sbjct: 599 KVFEDLLVKGYNL--DVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIIL 656

Query: 532 GLFKGKNISVGLHMFKLMERNGV 554
            LF+     +   + + M   G+
Sbjct: 657 SLFEKDENDMAEKLLREMIMRGL 679



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 208/427 (48%), Gaps = 18/427 (4%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           +A  +  +++++   P  +   KIL  L  +       SL   +   G K N +  + LI
Sbjct: 93  DAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILI 152

Query: 256 NAFCKEAKLEKAFQ-LYNLMMEMDLVPDL-----------IIYSILIDGLFKAGRLKEGN 303
           N+FC+   +  AF  L   +  ++++ D            + + +LI   FK   LK+  
Sbjct: 153 NSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFL 212

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLNGGFLPNVISYSILIKG 362
           +  L  +    K+ +    + +     +     +++ T  ++L  G+ P+ I+ +  IKG
Sbjct: 213 QSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKG 272

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C +G++ +A     +V+        ++Y +LI+G CK G+ +    L      + ++PD
Sbjct: 273 FCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPD 332

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V+ + +I+G+     + DA   + + V   + P++F +N L+ G C + +  D + LF 
Sbjct: 333 VVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFN 392

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M   NI PDV T ++L+ G    G++  A  +   M+K+ + PDV+TYS+++ G     
Sbjct: 393 KMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVN 452

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            ++    +F  M   GV  ++  YN+++N   K   +D A+KLF ++  + + PD+ITY+
Sbjct: 453 EVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYS 512

Query: 598 TIICGYC 604
           ++I G C
Sbjct: 513 SLIDGLC 519



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 163/316 (51%), Gaps = 31/316 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  +  +GK+ +++++F  M+   I   PD+     S LVD               
Sbjct: 371 YNALISGFCIVGKLKDAIDLFNKMTSKNII--PDVYT--FSILVD--------------- 411

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
             GFC          + G I+ A ++   ++++   P++VT + ++   C+  ++  A S
Sbjct: 412 --GFC----------KDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAES 459

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F+ +   G   NV +++ +IN FCK   +++A +L+  M    + PD+I YS LIDGL 
Sbjct: 460 IFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLC 519

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K+GR+    EL+     RG + D++ ++S++DA      V +A+    ++   G  P++ 
Sbjct: 520 KSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMN 579

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+IL+KGLCQ G+L +A  +F  +L++     +  Y+ +I GFC  G   +  +L   M
Sbjct: 580 TYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKM 639

Query: 415 IKRGLKPDAVVCSLLI 430
            + G  PDA    ++I
Sbjct: 640 EENGCIPDAKTYEIII 655



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 182/403 (45%), Gaps = 34/403 (8%)

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A SLF  LL   P P  + F  ++ +  K         L   M    +  + +  +IL
Sbjct: 92  NDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNIL 151

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR------AVQTYDR 343
           I+   + G +        + L RG+   + +     D    + D  R       +  + R
Sbjct: 152 INSFCQLGLI----PFAFSVLTRGVYW-IEILKDCFDRK-NLEDFKRLCWIVLILWDFKR 205

Query: 344 MLNGGFLP----NVI-SYSILI---KGLCQQGRLVEACGLF-----GQVLIRRLEPSLLT 390
           +    FL     NV+ S+ ILI   K   +Q  L+++  +       ++L    EP  +T
Sbjct: 206 LFLKDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTIT 265

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSV 445
            ++ I GFC  G++      +D +I  G   D V    LINGL  +G+   AL    ++ 
Sbjct: 266 LTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRND 325

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              + P++ ++NT++DG C+ K   D   L+       I PDV T+  LI G    G L 
Sbjct: 326 GKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLK 385

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            AI LF +M  + + PDV T+S ++ G  K  NI    ++  +M +  + PD+  Y+ L+
Sbjct: 386 DAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLM 445

Query: 566 N--MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +   L+ E N   A  +F  ++ RG+  ++ +YN +I G+C +
Sbjct: 446 DGYCLVNEVN--KAESIFNTMSHRGVTANVQSYNIMINGFCKI 486


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 244/512 (47%), Gaps = 51/512 (9%)

Query: 138 MSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRG-------KGFCVYEFLMNGL 188
           MS++G   +P++V    L+    D N   +  +L   M              Y  ++NG 
Sbjct: 157 MSELGC--TPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGF 214

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
             +G ++ A+++   +  +G  PN+VT   ++  LC    +  A  +F  ++  G +PN+
Sbjct: 215 FTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNI 274

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           VT++ LI+ +    + ++  ++   M    L PD   Y +L+D L K G+  E  +L  +
Sbjct: 275 VTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDS 334

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGD----------------------------------- 333
            + +G+K DV ++  ++  Y   G                                    
Sbjct: 335 MIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAM 394

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           +G A+  +++M   G  PNV++Y+ LI  LC+ GR+ +A   F Q++   + P+++ ++S
Sbjct: 395 IGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTS 454

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMT 448
           L+ G C   K      L+  M+ +G+ P+ V     +C+L   G +  A R      R+ 
Sbjct: 455 LVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVG 514

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
             P++  +N L+ G C + +  +  KL  +M    +KP+  T+  L+ G    G +  A 
Sbjct: 515 TRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAY 574

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +F +ML  G+TP V+TY+ I+HGLFK +  S    ++  M  +G    I  YN++LN L
Sbjct: 575 SVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGL 634

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            K   +D ALK+F  L  + L+ DIIT+N +I
Sbjct: 635 SKNNCVDEALKMFQSLCSKDLQVDIITFNIMI 666



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 247/517 (47%), Gaps = 42/517 (8%)

Query: 100 FFRLFRDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMG-IYLSPDLVQRLMS 155
           F R+ RD       D   YS L+  + R+G+++     F  +   G       +V RL+ 
Sbjct: 79  FNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLK 138

Query: 156 CLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
            L D+  VG+                   M  LLR+            + + G  PN+V+
Sbjct: 139 GLCDAKRVGE------------------AMGVLLRR------------MSELGCTPNVVS 168

Query: 216 CNKILKRLCINGQIGNASSLFDVLL---LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
            N +LK  C   +   A  L  ++    +    PN+V+++T+IN F  E +++KA+ L+ 
Sbjct: 169 YNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFL 228

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M +  + P+++ Y+I+IDGL KA  +     +    +D+G++ ++V ++ ++  Y+ IG
Sbjct: 229 DMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIG 288

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
                V+    M   G  P+  +Y +L+  LC++G+  EA  LF  ++ + ++P +  Y 
Sbjct: 289 QWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYG 348

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA-----VVCSLLINGLMGDALRFFFQSVRM 447
            ++ G+   G L +  S  D M+  G+ P+      V C+     ++G+A+  F +  + 
Sbjct: 349 IILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQ 408

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            L PN+  + TL+D  C+L R  D    F  M    + P+++  T L+ G+ +      A
Sbjct: 409 GLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKA 468

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             LFF+M+ +G+ P+V+ ++ I+  L     +     +  LMER G  PDI  YN L+  
Sbjct: 469 GELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRG 528

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
                  D A KL   +   GL+P+  TYNT++ GYC
Sbjct: 529 HCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYC 565



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 241/497 (48%), Gaps = 13/497 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  Y+ IG+  E V +   MS  G  L PD      L+  L       +  KL  +
Sbjct: 277 YTCLIHGYLSIGQWKEVVRMLKEMSAHG--LEPDCFTYGLLLDYLCKKGKCTEARKLFDS 334

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG      +Y  +++G   KG +         ++  G  PN    N +         
Sbjct: 335 MIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAM 394

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           IG A  +F+ +   G  PNVV ++TLI+A CK  +++ A   +N M+   + P++++++ 
Sbjct: 395 IGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTS 454

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ GL    + ++  EL    +++G+  +VV F+++M      G V +A +  D M   G
Sbjct: 455 LVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVG 514

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++ISY+ LI+G C  G+  EA  L   +L   L+P+  TY++L+ G+C+ G++ D +
Sbjct: 515 TRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAY 574

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           S++  M+  G+ P  V  + +++GL       +A   +   +      +++ +N +++G 
Sbjct: 575 SVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGL 634

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            +     + +K+F  +   +++ D+IT  ++I  +   G    A+ LF  +   GL PDV
Sbjct: 635 SKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDV 694

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY  I   L +  ++     MF  ME++G AP+  + N L+  L+   ++  A     +
Sbjct: 695 TTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSK 754

Query: 584 LTDRGLEPDIITYNTII 600
           + ++    +  T + +I
Sbjct: 755 IDEKNFSLEASTTSMLI 771



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 160/320 (50%), Gaps = 26/320 (8%)

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG--- 367
           DR L+L+ ++ +      + + D   A++ +D  L+     ++I+++ L+  +       
Sbjct: 11  DRCLELERIIGARARAGSLSVDD---ALKLFDEFLHHARPASIIAFNQLLAAVSSASRRG 67

Query: 368 -----RLVEACGLFGQVL---IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
                 LV +C  F +++     ++ P + TYS L+  FC+ G+L  GF+ +  ++K G 
Sbjct: 68  SSSTSELVVSC--FNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGW 125

Query: 420 KPDAVVCSL-LINGL-----MGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDT 472
           + + VV    L+ GL     +G+A+    + +  +   PN+  +NTL+ G C   RA + 
Sbjct: 126 RVNDVVVVNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEA 185

Query: 473 VKLFMLMGMYNIK---PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           ++L  +M    ++   P+++++  +I G  ++G +  A  LF  M  +G+ P+V+TY+ +
Sbjct: 186 LELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIV 245

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I GL K + +     +F+ M   GV P+I  Y  L++  +        +++  +++  GL
Sbjct: 246 IDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGL 305

Query: 590 EPDIITYNTIICGYCSLNSC 609
           EPD  TY  ++   C    C
Sbjct: 306 EPDCFTYGLLLDYLCKKGKC 325



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 149/321 (46%), Gaps = 4/321 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L+     I K +++ E+F  M + GI+ +      +M  L     V +  +L   M 
Sbjct: 452 FTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLME 511

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G    G  + A  +   ++  G  PN  T N +L   C +G+I 
Sbjct: 512 RVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRID 571

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A S+F  +L  G  P VVT++T+++   K  +  +A +LY  M+       +  Y+I++
Sbjct: 572 DAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIIL 631

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K   + E  ++  +   + L++D++ F+ ++ A +  G    A+  +  +   G +
Sbjct: 632 NGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLV 691

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +Y ++ + L ++G L E  G+F ++      P+ L  + L+      G +    + 
Sbjct: 692 PDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAY 751

Query: 411 YDNMIKRGLKPDAVVCSLLIN 431
              + ++    +A   S+LI+
Sbjct: 752 LSKIDEKNFSLEASTTSMLIS 772



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 123/287 (42%), Gaps = 31/287 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  +  +GK DE+ ++   M  +G  L P+                          
Sbjct: 522 YNALIRGHCLVGKTDEASKLLDIMLSVG--LKPNE------------------------- 554

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
               C Y  L++G  R G I++A+ + ++++  G  P +VT N IL  L    +   A  
Sbjct: 555 ----CTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKE 610

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L+  ++  G + ++ T++ ++N   K   +++A +++  +   DL  D+I ++I+I  L 
Sbjct: 611 LYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALL 670

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K GR ++   L  T    GL  DV  +  + +  +  G +      +  M   G  PN +
Sbjct: 671 KDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSL 730

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             + L++ L  +G +  A     ++  +       T S LI  F + 
Sbjct: 731 MLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSRE 777


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 169/655 (25%), Positives = 308/655 (47%), Gaps = 60/655 (9%)

Query: 7   NLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKW----THNCV 62
           N+ ++ +S N    S  K+ +S +  N A+ +++ L +++N    ++FF W    +  C 
Sbjct: 44  NVASLLKSPNWEKNSSLKSLVSHMSPNVASQVIS-LQRSDNDI-CVRFFMWVCKHSSYCF 101

Query: 63  SSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG-------KTYNFFRLFRDSLG---DFG 112
                 QL+ +++ S +  VA  V   ++ +         K  + F   R+  G   ++ 
Sbjct: 102 DPTQKNQLLKLIVSSGLFRVAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYP 161

Query: 113 CDYSFLIE------------NYVR-------IGKID--------------ESVEIF-AYM 138
           C  S L+              Y R       +G ID              E+ E+F   +
Sbjct: 162 CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKI 221

Query: 139 SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGV 193
             +G  L   +V  L+       ++    K+   M  +G C      Y  L++GL   G 
Sbjct: 222 LKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGR 281

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +E AF +  Q+ ++G  P+  T   ++K LC  G I  A +LFD ++  G KPNV T++ 
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTV 341

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI+  C++ K+E+A  +   M++  + P +I Y+ LI+G  K GR+    ELL     R 
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            K +V  F+ +M+    +G   +AV    RML+ G  P+++SY++LI GLC++G +  A 
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAY 461

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L   +    LEP  LT++++I+ FCK GK     +    M+++G+  D V  + LI+G+
Sbjct: 462 KLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521

Query: 434 MG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                  DAL      V+M ++      N ++D   +  +  + + +   +    + P V
Sbjct: 522 CNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSV 581

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+T L+ G+   G +S +  +   M   G  P+V  Y+ II+GL +   +     +   
Sbjct: 582 VTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           M+ +GV+P+   Y V++   +    LD AL+    + +RG E +   Y++++ G+
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGF 696



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 246/547 (44%), Gaps = 34/547 (6%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LIH+ +   +  +  HVF          YN F         F  D      N   + K  
Sbjct: 2   LIHIRIPRKILALRRHVF--------PPYNAFFSVSSRPSQFSSD-QVAAHNVASLLK-S 51

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
            + E  + +  +  ++SP++  +++S     N +   + +    +   +C      N LL
Sbjct: 52  PNWEKNSSLKSLVSHMSPNVASQVISLQRSDNDICVRFFM-WVCKHSSYCFDPTQKNQLL 110

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV-GPKPNV 248
           +  V    F +   VI    +     C K + +L          S FD L  V G + N 
Sbjct: 111 KLIVSSGLFRVAHDVIV-ALIRECSRCEKEMLKLI---------SCFDELREVSGFRLNY 160

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMD---LVPDLIIYSILIDGLFKAGRLKEGNEL 305
             +S+L+ +    AKL+  F  Y     M+    V  +I Y  +++ L K G  +     
Sbjct: 161 PCYSSLLMSL---AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMF 217

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM-LNGGFLPNVISYSILIKGLC 364
           +   L  G  LD  + +S++  +    ++  A++ +D M   G   PN +SYSILI GLC
Sbjct: 218 MCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLC 277

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + GRL EA GL  Q+  +  +PS  TY+ LI   C  G +   F+L+D MI RG KP+  
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVH 337

Query: 425 VCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             ++LI+GL  D     A     + V+  + P++  +N L++G C+  R     +L  +M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVM 397

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                KP+V T   L+ G+   G    A+ L  +ML  GL+PD+++Y+ +I GL +  ++
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +V   +   M    + PD   +  ++N   K+   D A    G +  +G+  D +T  T+
Sbjct: 458 NVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517

Query: 600 ICGYCSL 606
           I G C++
Sbjct: 518 IDGVCNV 524



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 132/552 (23%), Positives = 229/552 (41%), Gaps = 71/552 (12%)

Query: 96  KTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           K +N F    D +   GC      Y+ LI+   R GKI+E+  +   M   GI+ S    
Sbjct: 319 KAFNLF----DEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITY 374

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVI 205
             L++       V   ++L   M  +  C      +  LM GL R G    A H+ ++++
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
             G  P+IV+ N ++  LC  G +  A  L   +     +P+ +TF+ +INAFCK+ K +
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKAD 493

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN------------------ELLL 307
            A     LM+   +  D +  + LIDG+   G+ ++                     ++L
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVIL 553

Query: 308 TALDRGLKL-----------------DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L +G KL                  VV +++++D  +  GD+  + +  + M   G L
Sbjct: 554 DMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCL 613

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV  Y+I+I GLCQ GR+ EA  L   +    + P+ +TY+ ++ G+  +GKL      
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673

Query: 411 YDNMIKRGLKPDAVVCSLLING--LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC---- 464
              M++RG + +  + S L+ G  L    +R         LI  +        G C    
Sbjct: 674 VRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLV 733

Query: 465 -------RLKRATDTVKLFMLMGMYNIKP-DVITHTVLIRGIASQGSLSSAILLFFQMLK 516
                  R   +   V+  +  G++  K  D+I  +       S+   +  + L   +LK
Sbjct: 734 TRLCKEGRTDESNGLVQTILKSGVFLEKAIDIIMESY-----CSKKKHTKCVELITLVLK 788

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHM-FKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            G  P   ++  +I GL K  +      +  +L+  NGV     +    +  L++  +  
Sbjct: 789 SGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLP-YVECLMETGDCS 847

Query: 576 AALKLFGQLTDR 587
             + L  QL  R
Sbjct: 848 EVIDLVDQLHSR 859


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 213/421 (50%), Gaps = 5/421 (1%)

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
           K ++  A  ++R + + G  P + T N +L   C  G++  A  L   +   G  P+ VT
Sbjct: 215 KNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVT 274

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           F+ LIN   K+ +L++A  L   M +  L      Y+ LI G  K G L E   L    +
Sbjct: 275 FNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMV 334

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
            RG+   V   +++M  +   G +  A Q    ML    +P++ISY+ LI G C+ G + 
Sbjct: 335 TRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIG 394

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           EA  L  ++  R L  +++TY++LIDG C+ G L     L ++MI RG+ PD V  ++L+
Sbjct: 395 EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLV 454

Query: 431 NGL--MGDAL---RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           NG   +G+ L    FF + + + L P+ F +   + G  +L       KL   M      
Sbjct: 455 NGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFP 514

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PDVIT+ V + G+   G+L  A  L  +M++ G  PD +TY++ +H   +  ++  G  +
Sbjct: 515 PDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREI 574

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           F  M   G  P +  Y VL++       LD A+  F ++ ++G+ P++ITYN +I G+C 
Sbjct: 575 FYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCK 634

Query: 606 L 606
           +
Sbjct: 635 V 635



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 243/483 (50%), Gaps = 15/483 (3%)

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLM 185
           +++E++  M + GI  +      ++        V +   L   M+ +G       +  L+
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           NGL +KG ++ A  + +++ + G   +  T N ++   C  G +  A +L++ ++  G  
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P V + +T++  FCKE K+  A Q  + M++ +L+PD+I Y+ LI G  + G + E   L
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L     R L  ++V +++++D    +GD+  A++  + M+N G  P+V++Y++L+ G C+
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACK 459

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G ++ A   F ++L   L P    Y++ I G  K G     F L + M+ +G  PD + 
Sbjct: 460 LGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVIT 519

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            ++ +NGL     + +A     + +R   +P+   + + M          +  ++F  M 
Sbjct: 520 YNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDML 579

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                P V+T+TVLI   A  G L  A+  F +M ++G+ P+VITY+ +I+G  K + + 
Sbjct: 580 SRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMD 639

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL---DAALKLFGQLTDRGLEPDIITYN 597
                F  M+  G+ P+   Y +L+N   + CN+     AL+L+ Q+  + + PD  T+ 
Sbjct: 640 QACKFFIEMQEKGIFPNKYTYTILIN---ENCNMGKWQEALRLYAQMLGKRIRPDSCTHG 696

Query: 598 TII 600
            ++
Sbjct: 697 ALL 699



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 217/430 (50%), Gaps = 9/430 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI    + G++ ++  +   M+  G+ +SP     L+        + +   L   M 
Sbjct: 275 FNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMV 334

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       +  +M G  ++G + +A      ++++  +P+I++ N ++   C  G IG
Sbjct: 335 TRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIG 394

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L D L       N+VT++TLI+  C+   LE A +L   M+   + PD++ Y++L+
Sbjct: 395 EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLV 454

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G  K G +    E     L  GL  D   +++ +   + +GD  +A +  + ML  GF 
Sbjct: 455 NGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFP 514

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+VI+Y++ + GLC+ G L EA  L  +++     P  +TY+S +    ++G LR+G  +
Sbjct: 515 PDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREI 574

Query: 411 YDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + +M+ RG  P  V  ++LI     NG +  A+ +F +     ++PN+  +N L++G C+
Sbjct: 575 FYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCK 634

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           +++     K F+ M    I P+  T+T+LI    + G    A+ L+ QML + + PD  T
Sbjct: 635 VRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCT 694

Query: 526 YSAIIHGLFK 535
           + A++  L K
Sbjct: 695 HGALLKKLDK 704



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 177/344 (51%), Gaps = 5/344 (1%)

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           ++  MM    +PD+   + ++  L     L +  E+     + G++  V  +++++ ++ 
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G+V RA+    +M   G  P+ +++++LI GL ++G L +A GL  ++    L  S  
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-----DAVVCSLLINGLMGDALRFFFQS 444
           TY+ LI G+CK G L +  +L++ M+ RG+ P     + ++      G M DA +     
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           ++  L+P++  +NTL+ G CRL    +   L   +   N+  +++T+  LI G+   G L
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
            +A+ L   M+ RG+ PDV+TY+ +++G  K  N+ +    F  M   G+APD   Y   
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +   +K  +   A KL  ++  +G  PD+ITYN  + G C L +
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGN 532



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 170/374 (45%), Gaps = 59/374 (15%)

Query: 138 MSDMGIYLSPDLVQRLMSCLVDSNS----------VGQYYKLCRAMRGKGFC----VYEF 183
           MSD    LS  L + LM  ++  N+          +G+ + L   +R +        Y  
Sbjct: 358 MSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNT 417

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++GL R G +E A  +   +I RG  P++VT   ++   C  G +  A   FD +L VG
Sbjct: 418 LIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVG 477

Query: 244 --P---------------------------------KPNVVTFSTLINAFCKEAKLEKAF 268
             P                                  P+V+T++  +N  CK   LE+A 
Sbjct: 478 LAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAG 537

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           +L   M+    VPD + Y+  +    + G L+EG E+    L RG    VV ++ ++ A+
Sbjct: 538 ELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAH 597

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G +  A+  +  M   G +PNVI+Y++LI G C+  ++ +AC  F ++  + + P+ 
Sbjct: 598 ALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNK 657

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT 448
            TY+ LI+  C  GK ++   LY  M+ + ++PD+     L+  L  D   +  Q+V+  
Sbjct: 658 YTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKD---YKVQAVQ-- 712

Query: 449 LIPNLFIFNTLMDG 462
                FI + ++DG
Sbjct: 713 -----FIESLILDG 721



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 146/280 (52%), Gaps = 5/280 (1%)

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           +++M+   FLP+V + + ++K L  +  LV+A  ++  +    + P++ TY++++  FCK
Sbjct: 190 FEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCK 249

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
            G+++    L   M +RG  P  V  ++LINGL     +  A     +  +  L  + + 
Sbjct: 250 GGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYT 309

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N L+ G C+     + + L+  M    + P V +H  ++ G   +G +S A      ML
Sbjct: 310 YNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDML 369

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           K+ L PD+I+Y+ +I+G  +  NI     +   +    ++ +I  YN L++ L +  +L+
Sbjct: 370 KKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLE 429

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
            ALKL   + +RG+ PD++TY  ++ G C L + L+   F
Sbjct: 430 TALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEF 469


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 233/494 (47%), Gaps = 34/494 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L++   R  ++  +V +   MS  G+         LM   V+  S+    ++   M 
Sbjct: 188 FNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARML 247

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G          L+NG  + G +E+A    +Q I  GF P+ +T N  +  LC NG +G
Sbjct: 248 EMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVG 307

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  + DV++  G  P+V T++ ++N  CK  +LE+A  + N M+E   +PD+  ++ LI
Sbjct: 308 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLI 367

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L    RL+E  +L      +GL  DV  F+ +++A   +GD   A++ ++ M + G  
Sbjct: 368 VALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCT 427

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y+ LI  LC  G+L +A  L  ++       S +TY+++IDG CK  ++ +   +
Sbjct: 428 PDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEV 487

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +D M  +G+  +A+                               FNTL+DG C+ KR  
Sbjct: 488 FDQMDLQGISRNAIT------------------------------FNTLIDGLCKDKRID 517

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D  +L   M    ++P+ IT+  ++     QG +  A  +   M   G   DV+TY  +I
Sbjct: 518 DANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLI 577

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +GL K     V L + + M   G+      YN ++  L +  N   A+ LF ++T+ G  
Sbjct: 578 NGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEP 637

Query: 591 PDIITYNTIICGYC 604
           PD  TY  +  G C
Sbjct: 638 PDAFTYKIVFRGLC 651



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 219/431 (50%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  L+N L+    ++    ++ ++ +RG  P++VT N ++K LC   Q+  A  + + +
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 211

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+  TF+TL+  F +E  ++ A ++   M+EM   P  +  ++LI+G  K GR+
Sbjct: 212 SSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRV 271

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++    +   +  G + D + +++ ++     G VG A++  D M+  G  P+V +Y+I+
Sbjct: 272 EDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIV 331

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  LC+ G+L EA G+  Q++ R   P + T+++LI   C   +L +   L   +  +GL
Sbjct: 332 VNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGL 391

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    ++LIN L  +GD   ALR F +       P+   +NTL+D  C L +    + 
Sbjct: 392 SPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALD 451

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M         +T+  +I G+  +  +  A  +F QM  +G++ + IT++ +I GL 
Sbjct: 452 LLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 511

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K I     +   M   G+ P+   YN +L    K+ ++  A  +   +T  G E D++
Sbjct: 512 KDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVV 571

Query: 595 TYNTIICGYCS 605
           TY T+I G C 
Sbjct: 572 TYGTLINGLCK 582



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 197/403 (48%), Gaps = 5/403 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   + V  N +L  L    ++    +++  +   G KP+VVTF+TL+ A C+  ++  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             +   M    + PD   ++ L+ G  + G +K    +    L+ G     V  + +++ 
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y  +G V  A+    + +  GF P+ I+Y+  + GLCQ G +  A  +   ++    +P 
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           + TY+ +++  CK+G+L +   + + M++RG  PD    + LI  L     + +AL    
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           Q     L P+++ FN L++  C++      ++LF  M      PD +T+  LI  + S G
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLG 444

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A+ L  +M   G     +TY+ II GL K   I     +F  M+  G++ +   +N
Sbjct: 445 KLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 504

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            L++ L K+  +D A +L  Q+   GL+P+ ITYN+I+  YC 
Sbjct: 505 TLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCK 547



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 188/373 (50%), Gaps = 11/373 (2%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L G + + V ++ L+N   + +K++    +Y+ M E  + PD++ ++ L+  L +A +++
Sbjct: 143 LFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVR 202

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               +L      G+  D   F+++M  +V  G +  A++   RML  G  P  ++ ++LI
Sbjct: 203 TAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLI 262

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ GR+ +A G   Q +    EP  +TY++ ++G C++G +     + D M++ G  
Sbjct: 263 NGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHD 322

Query: 421 PDA-----VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC---RLKRATDT 472
           PD      VV  L  NG + +A     Q V    +P++  FNTL+   C   RL+ A D 
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDL 382

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            +   L G+    PDV T  +LI  +   G    A+ LF +M   G TPD +TY+ +I  
Sbjct: 383 ARQVTLKGL---SPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDN 439

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L     +   L + K ME  G       YN +++ L K+  ++ A ++F Q+  +G+  +
Sbjct: 440 LCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 499

Query: 593 IITYNTIICGYCS 605
            IT+NT+I G C 
Sbjct: 500 AITFNTLIDGLCK 512



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 85/168 (50%), Gaps = 3/168 (1%)

Query: 455 IFNTLMDGCCRLKRATDTVKLFM--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           + ++ ++   R +   D V L +  L  ++ I+ D + +  L+  +     +     ++ 
Sbjct: 115 VVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYS 174

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M +RG+ PDV+T++ ++  L +   +   + M + M  +GVAPD   +  L+   ++E 
Sbjct: 175 EMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEG 234

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID-GYFKSQI 619
           ++ AAL++  ++ + G  P  +T N +I GYC L       GY + +I
Sbjct: 235 SIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEI 282


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/551 (26%), Positives = 270/551 (49%), Gaps = 24/551 (4%)

Query: 62  VSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           V +  + QLI  L   +  D A  +  + + + G T + F             Y+ LI+ 
Sbjct: 124 VQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVF------------SYNALIKG 171

Query: 122 YVRIGKIDESVEIFAYMS-DMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF 178
                K  E++E+  +M+ D G   SP++V    ++        V + Y L   M G+G 
Sbjct: 172 LCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGL 231

Query: 179 ----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++GL +   ++ A  + + +  +G +P+  T N +++  C  GQ+  A  
Sbjct: 232 PPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVR 291

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   +   G +P+VVT+S LI  +CK  +  +A  +++ M+     P+  IY IL+ G  
Sbjct: 292 LLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYA 351

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             G L +  +LL   +  G+  +   F+ ++ AY   G V +A+  +  M   G  P+V+
Sbjct: 352 TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVV 411

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           SYS +I  LC+ GR+ +A   F Q++   L P++++++SLI G C  G+ +    L   M
Sbjct: 412 SYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEM 471

Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           I RG+ PDA+  + +++     G + +A  FF   + + + P++  +NTL+DG C + + 
Sbjct: 472 INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKM 531

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +++K    M    ++PD  T+  L+ G    G +  A+ L+ +M ++ +    IT + +
Sbjct: 532 DESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIM 591

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           +HGLF+   I     ++  M   G    I  YN +L  L +   +D AL++F  L  +  
Sbjct: 592 LHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEF 651

Query: 590 EPDIITYNTII 600
           E D+ T++ +I
Sbjct: 652 ELDVRTFSIVI 662



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 252/541 (46%), Gaps = 49/541 (9%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC-RAMRGK 176
           LI  +  +G++D +   FA     G  +    + +L+  L D N       +  R M   
Sbjct: 97  LIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPEL 156

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVI-----QRGF--VPNIVTCNKILKRLCINGQI 229
           G+    F  N L++   +E       +++       G+   PN+V+ N ++      G++
Sbjct: 157 GYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEV 216

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  LF  ++  G  P+VVT+++LI+  CK   ++KA  +   M +  ++PD   Y+I+
Sbjct: 217 DKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIM 276

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I G    G+L+E   LL      GL+ DVV +S ++  Y  IG    A   +D M+  G 
Sbjct: 277 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQ 336

Query: 350 LPNVISYSILIKGLCQQGRLVE-----------------------------------ACG 374
            PN   Y IL+ G   +G L++                                   A  
Sbjct: 337 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 396

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
            F ++    L P +++YS++I   CK+G++ D    ++ M+  GL P+ +  + LI+GL 
Sbjct: 397 AFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC 456

Query: 434 -MGDALR---FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
            +G+  +     F+ +   + P+    NT+MD  C+  R  +    F ++    +KPDV+
Sbjct: 457 SIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVV 516

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           ++  LI G    G +  +I    +M+  GL PD  TY+++++G FK   +   L +++ M
Sbjct: 517 SYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREM 576

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            R  V       N++L+ L +   + AA +L+ ++ DRG +  I TYNT++ G C  NSC
Sbjct: 577 FRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCE-NSC 635

Query: 610 L 610
           +
Sbjct: 636 V 636



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 253/518 (48%), Gaps = 52/518 (10%)

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           +  H+FDK V+   +TYN                  +I  Y  +G+++E+V +   MS  
Sbjct: 257 ILQHMFDKGVMPDTRTYNI-----------------MIRGYCSLGQLEEAVRLLKKMSGS 299

Query: 142 GIYLSPDLVQ---------RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKG 192
           G  L PD+V          ++  C  ++ SV  +  + R  +     +Y  L++G   KG
Sbjct: 300 G--LQPDVVTYSLLIQYYCKIGRC-AEARSV--FDSMVRKGQKPNSTIYHILLHGYATKG 354

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            + +   +   +I+ G        N ++     +G +  A + F  +   G +P+VV++S
Sbjct: 355 ALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYS 414

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           T+I+  CK  ++E A   +N M+   L P++I ++ LI GL   G  K+  EL    ++R
Sbjct: 415 TVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR 474

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G+  D +  +++MD     G V  A   +D +++ G  P+V+SY+ LI G C  G++ E+
Sbjct: 475 GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDES 534

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
                +++   L P   TY+SL++G+ K+G++ D  +LY  M ++ +K  A+  +++++G
Sbjct: 535 IKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHG 594

Query: 433 LMGDALRFFFQSVRMTLIPNLFI-------------FNTLMDGCCRLKRATDTVKLFMLM 479
           L        FQ+ R+     L++             +NT++ G C      + +++F  +
Sbjct: 595 L--------FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDL 646

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                + DV T +++I  +   G +  A  LF  M+ RG  PDVITYS +I    +   +
Sbjct: 647 RSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLL 706

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
               ++F  ME+NG A D  + N+++  L+++ ++  A
Sbjct: 707 EESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRA 744



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 204/456 (44%), Gaps = 87/456 (19%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE-----------KAFQLYNL------- 273
           A SLF+ ++  G          LI  FC   +L+             +++ N+       
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 274 ------------------MMEMDLVPDLIIYSILI------------------------- 290
                             M E+   PD+  Y+ LI                         
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 291 -------------DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
                        DG FK G + +   L    + +GL  DVV ++S++D       + +A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           V     M + G +P+  +Y+I+I+G C  G+L EA  L  ++    L+P ++TYS LI  
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL-------I 450
           +CK G+  +  S++D+M+++G KP++ +  +L++G    A +     VR  L       I
Sbjct: 315 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGY---ATKGALIDVRDLLDLMIRDGI 371

Query: 451 P-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
           P     FN L+    +       +  F  M    ++PDV++++ +I  +   G +  A+ 
Sbjct: 372 PFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVY 431

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            F QM+  GL+P++I+++++IHGL   G+   V    F+++ R G+ PD    N +++ L
Sbjct: 432 HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR-GIHPDAIFMNTIMDNL 490

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            KE  +  A   F  +   G++PD+++YNT+I GYC
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYC 526



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 16/288 (5%)

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           AV  ++ M+  G         ILI+  C  GRL  A   F   L        +T + LI 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 397 GFCKSGKLRDGFSL-YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL- 449
           G C   +  D   + +  M + G  PD    + LI GL       +AL      + MT  
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELL---IHMTAD 191

Query: 450 -----IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
                 PN+  +NT++DG  +         LF  M    + PDV+T+  LI G+    ++
Sbjct: 192 GGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAM 251

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ +   M  +G+ PD  TY+ +I G      +   + + K M  +G+ PD+  Y++L
Sbjct: 252 DKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLL 311

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
           +    K      A  +F  +  +G +P+   Y+ ++ GY +    LID
Sbjct: 312 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYAT-KGALID 358



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 39/243 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y  +GK+DES++    M  +G+         L++    +  V     L R M 
Sbjct: 518 YNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMF 577

Query: 175 GKG--FCV--YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN---- 226
            K   FC      +++GL + G I  A  ++ +++ RG    I T N +L  LC N    
Sbjct: 578 RKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVD 637

Query: 227 -------------------------------GQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
                                          G+I  A SLF  ++L GP P+V+T+S +I
Sbjct: 638 EALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMI 697

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
            +  +E  LE++  L+  M +     D  + +I++  L + G ++     L    ++   
Sbjct: 698 KSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFS 757

Query: 316 LDV 318
           L+ 
Sbjct: 758 LEA 760


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 252/498 (50%), Gaps = 14/498 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  + R G++ ++  +F  M   G+   PD+V     +  L  + ++ +   + R 
Sbjct: 230 YNTVIHGFFREGEVSKACNLFHEMMQQGVV--PDVVTYSSYIDALCKARAMDKAELVLRQ 287

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   GF      Y  +++G    G  +    M R++ +RG +P+I TCN  +  LC +G+
Sbjct: 288 MISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGK 347

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A+  FD +   G KP++VT+S L++ +  E  +     L+N M    +V D  +Y+I
Sbjct: 348 SKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNI 407

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID   K G + E   +     +RG+  D   + +V+ A+  +G +  A+  +++M+  G
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL-EPSLLTYSSLIDGFCKSGKLRDG 407
             P+ I Y+ LI+G C  G LV+A  L  +++ R +  P+ + ++S+I+  CK G++ + 
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             ++D +I  G +PD +  + LI+G      M  A       + + + P++  ++ L+DG
Sbjct: 528 QDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            CR  R  D + LF  M    +KP  IT+ +++ G+ + G    A  +  +M++ G T D
Sbjct: 588 YCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           + T   I+ GL +       + +FK +    V  +IAI N +++ + K    + A +LF 
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFD 707

Query: 583 QLTDRGLEPDIITYNTII 600
            ++  GL P+  TY  +I
Sbjct: 708 SISATGLVPNASTYGVMI 725



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 240/498 (48%), Gaps = 18/498 (3%)

Query: 127 KIDESVEIFAY-MSDMGIYLSPDLVQR---LMSCLVDSNSVGQYYKLCRAMRGKGFCV-- 180
           + D++V +  + M ++G+   PD +     L S   DS S      L   ++  G C   
Sbjct: 169 RSDDAVNVLLHRMPELGV--EPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPN 226

Query: 181 ---YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y  +++G  R+G +  A ++  +++Q+G VP++VT +  +  LC    +  A  +  
Sbjct: 227 VVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLR 286

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            ++  G +P+ VT++ +I+ +    + ++   ++  M    L+PD+   +  +  L K G
Sbjct: 287 QMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHG 346

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           + KE  E   +   +G K D+V +S ++  Y   G V   +  ++ M   G + +   Y+
Sbjct: 347 KSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYN 406

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           ILI    ++G + EA  +F Q+  R + P   TY ++I  F + G+L D    ++ MI  
Sbjct: 407 ILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 418 GLKPDAVVCSLLING--LMGDALR----FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           GLKPD +V + LI G  + G+ ++          R    PN   FN++++  C+  R  +
Sbjct: 467 GLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVE 526

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              +F L+     +PDVIT   LI G    G +  A  +   M+  G+ PDV+TYSA++ 
Sbjct: 527 AQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLD 586

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G  +   I  GL +F+ M   GV P    Y ++L+ L  +     A K+  ++ + G   
Sbjct: 587 GYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM 646

Query: 592 DIITYNTIICGYCSLNSC 609
           DI T   I+ G C  N+C
Sbjct: 647 DISTCGIILGGLCR-NNC 663



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 231/475 (48%), Gaps = 14/475 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  Y  +G+  E+  +F  M+  G  L PD+      MS L       +  +   +
Sbjct: 300 YNCMIHGYSILGQWKETAGMFREMTRRG--LMPDIFTCNSYMSSLCKHGKSKEAAEFFDS 357

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  L++G   +G + +  ++   +   G V +    N ++      G 
Sbjct: 358 MAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGM 417

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  P+  T+ T+I AF +  +L  A   +N M+ M L PD I+Y+ 
Sbjct: 418 MDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNS 477

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGL-KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           LI G    G L +  EL+   + RG+ + + V F+S++++    G V  A   +D +++ 
Sbjct: 478 LIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHI 537

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+VI+++ LI G    G++ +A G+   ++   +EP ++TYS+L+DG+C++G++ DG
Sbjct: 538 GERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDG 597

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+  M+ +G+KP  +   ++++GL  D     A +   + +      ++     ++ G
Sbjct: 598 LILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            CR     + + LF  +G  N+K ++     +I  +        A  LF  +   GL P+
Sbjct: 658 LCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPN 717

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
             TY  +I  L K  ++    +MF LME++G AP   + N ++ +L+++  +  A
Sbjct: 718 ASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKA 772



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 189/367 (51%), Gaps = 8/367 (2%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P V T++ L++  C+  +    F L+   ++  L  D+I+ +IL+  L  A R  +   +
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 306 LLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML--NGGFLPNVISYSILIKG 362
           LL  +   G++ D + +S+V+ +        RA+     M+  +GG  PNV+SY+ +I G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
             ++G + +AC LF +++ + + P ++TYSS ID  CK+  +     +   MI  G +PD
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 423 AVVCSLLING--LMG---DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + +I+G  ++G   +    F +  R  L+P++F  N+ M   C+  ++ +  + F 
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M     KPD++T++VL+ G A++G +   + LF  M   G+  D   Y+ +I    K  
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +   + +F  M+  GV PD   Y  ++    +   L  A+  F Q+   GL+PD I YN
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYN 476

Query: 598 TIICGYC 604
           ++I G+C
Sbjct: 477 SLIQGFC 483



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/494 (24%), Positives = 242/494 (48%), Gaps = 19/494 (3%)

Query: 93  QFGKTYNFFRLF--RDSLGD-FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           Q+ +T   FR    R  + D F C+    + +  + GK  E+ E F  M+  G    PDL
Sbjct: 312 QWKETAGMFREMTRRGLMPDIFTCNS--YMSSLCKHGKSKEAAEFFDSMAAKG--HKPDL 367

Query: 150 VQR--LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQ 203
           V    L+        V     L  +M G G      VY  L++   ++G+++ A  +  Q
Sbjct: 368 VTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQ 427

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           + +RG +P+  T   ++      G++ +A   F+ ++ +G KP+ + +++LI  FC    
Sbjct: 428 MQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGN 487

Query: 264 LEKAFQLYNLMMEMDLV-PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           L KA +L + MM   +  P+ + ++ +I+ L K GR+ E  ++    +  G + DV+ F+
Sbjct: 488 LVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFN 547

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           S++D Y  +G + +A    D M++ G  P+V++YS L+ G C+ GR+ +   LF ++L +
Sbjct: 548 SLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSK 607

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDA 437
            ++P+ +TY  ++ G    G+      +   MI+ G   D   C +++ GL       +A
Sbjct: 608 GVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEA 667

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           +  F +   M +  N+ I NT++D   ++++  +  +LF  +    + P+  T+ V+I  
Sbjct: 668 IALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITN 727

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +  +GS+  A  +F  M K G  P     + II  L +   IS   +    ++   ++ +
Sbjct: 728 LLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLE 787

Query: 558 IAIYNVLLNMLIKE 571
            +  +++L++  ++
Sbjct: 788 ASTASLMLSLFSRK 801



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 8/264 (3%)

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           LP V +Y+IL+   C+  R      LFG+ L   L+  ++  + L+   C + +  D  +
Sbjct: 116 LPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVN 175

Query: 410 -LYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMT--LIPNLFIFNTLMD 461
            L   M + G++PD +  S ++  L  D     AL      V+ +    PN+  +NT++ 
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G  R    +    LF  M    + PDV+T++  I  +    ++  A L+  QM+  G  P
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D +TY+ +IHG            MF+ M R G+ PDI   N  ++ L K      A + F
Sbjct: 296 DKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF 355

Query: 582 GQLTDRGLEPDIITYNTIICGYCS 605
             +  +G +PD++TY+ ++ GY +
Sbjct: 356 DSMAAKGHKPDLVTYSVLLHGYAA 379



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/373 (19%), Positives = 152/373 (40%), Gaps = 56/373 (15%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +A  +++ ++    P P   FF              +I+ L +      A  +FD +VI 
Sbjct: 490 KAKELISEMMSRGIPRPNTVFFN------------SIINSLCKEGRVVEAQDIFD-LVIH 536

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
            G+  +               ++ LI+ Y  +GK++++  +   M  +GI   PD+V   
Sbjct: 537 IGERPDVI------------TFNSLIDGYGLVGKMEKAFGVLDAMISVGI--EPDVV--- 579

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
                                      Y  L++G  R G I++   + R+++ +G  P  
Sbjct: 580 --------------------------TYSALLDGYCRNGRIDDGLILFREMLSKGVKPTT 613

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           +T   IL  L  +G+   A  +   ++  G   ++ T   ++   C+    ++A  L+  
Sbjct: 614 ITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKK 673

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           +  M++  ++ I + +ID ++K  + +E NEL  +    GL  +   +  ++   +  G 
Sbjct: 674 LGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGS 733

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           V  A   +  M   G  P+    + +I+ L ++G + +A     +V  + +     T S 
Sbjct: 734 VEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASL 793

Query: 394 LIDGFCKSGKLRD 406
           ++  F + GK R+
Sbjct: 794 MLSLFSRKGKYRE 806


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/560 (26%), Positives = 269/560 (48%), Gaps = 30/560 (5%)

Query: 58  THNCVSSPNIA-QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS 116
           T  C    ++A  +I    ++ M D A  +F +M   FG                   Y+
Sbjct: 71  TQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIR------------SYN 118

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMR 174
            L+   +   K DE+   F Y   MG  LSP+L     L+          +  +L   M 
Sbjct: 119 SLLNALIESNKWDEAESFFLYFETMG--LSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y  L+N L + G + +A  +  ++ +RG  P++   N ++      G I 
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 236

Query: 231 NASSLFDVLLLVGPK--PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           NAS +++  LL GP   PN+ +++ +IN  CK  K +++F++++ M + +   DL  YS 
Sbjct: 237 NASEIWE-RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL  +G L     +     + G+  DVVV++++++ Y+  G +   ++ +  M   G
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
               V+SY+ILI+GL +  ++ EA  ++  +  +      +TY  L+ G CK+G L    
Sbjct: 356 -CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKAL 414

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           S+ +         D    S +INGL     + +      Q  +    PN  + N +++G 
Sbjct: 415 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGF 474

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            R  +  D ++ F  M      P V+T+  LI G++     S A  L  +ML +G  P++
Sbjct: 475 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNM 534

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           ITYS +++GL +GK + + L+++      G  PD+ ++N++++ L     ++ AL+L+ +
Sbjct: 535 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 594

Query: 584 LTDRGLEPDIITYNTIICGY 603
           +  R   P+++T+NT++ G+
Sbjct: 595 MKQRKCVPNLVTHNTLMEGF 614



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 238/518 (45%), Gaps = 40/518 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKM-- 90
           N++L  LI++N    A  FF +      SPN+     LI +  +    D A  + + M  
Sbjct: 118 NSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWE 177

Query: 91  ------VIQFGKTYN----------FFRLF-----RDSLGDFGCDYSFLIENYVRIGKID 129
                 V  +G   N            +LF     R    D  C Y+ LI+ + + G I 
Sbjct: 178 QGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVAC-YNILIDGFFKKGDIL 236

Query: 130 ESVEIFAYMSDMGIYLSPD------LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
            + EI+  +   G  + P+      ++  L  C     S   ++++ +  RG+    Y  
Sbjct: 237 NASEIWERLLK-GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++GL   G ++ A  +++++ + G  P++V  N +L      G+I     L+ V+   G
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +  VV+++ LI    + AK+++A  ++ L+ E D   D + Y +L+ GL K G L +  
Sbjct: 356 CR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKAL 414

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +L  A +    LD   +SS+++     G +       D+M   G  PN    + +I G 
Sbjct: 415 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGF 474

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
            +  +L +A   FG ++ +   P+++TY++LI+G  K+ +  + ++L   M+ +G KP+ 
Sbjct: 475 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNM 534

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  SLL+NGL     +  AL  + Q++     P++ + N ++ G C   +  D ++L+  
Sbjct: 535 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 594

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           M      P+++TH  L+ G         A  ++  +L+
Sbjct: 595 MKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/537 (25%), Positives = 258/537 (48%), Gaps = 50/537 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+ Y ++GK+ +++ +   M  +G+ ++  +   L++    +  V +  +L   MR
Sbjct: 175 YGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMR 234

Query: 175 -------GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                     +C    L++G  R G+   AF++  Q++++G  P +VT N +LK LC  G
Sbjct: 235 KLDLKPDSYSYCT---LVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFG 291

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
              +A  L+ ++L  G  PN V + TL++   K     +A  L++ ++   +   +  ++
Sbjct: 292 DYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFN 351

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +I+GL K G +    E      + G K D + + ++ D Y  +G+V  A +  ++M   
Sbjct: 352 TMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKE 411

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              P++  Y+ LI GL    ++ +   L  ++  R L P+++TY +LI G+C  G+L   
Sbjct: 412 EIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKA 471

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLM--------------------------------G 435
           FS Y  MI +G  P+ ++CS +++ L                                  
Sbjct: 472 FSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNA 531

Query: 436 DALRFFFQSVRMTL--------IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           D  +     +  TL        +PN  ++N  M G C+  +  D  + F+ +   +  PD
Sbjct: 532 DIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPD 591

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
             T+  LI G ++ G ++ A  L  +M+ +GL P++ TY+A+++GL K   +     +F 
Sbjct: 592 NFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFD 651

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +   G+ P++  YN+L++   K  +   AL L G++   G+ P IITY+++I G+C
Sbjct: 652 KLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFC 708



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 139/605 (22%), Positives = 268/605 (44%), Gaps = 71/605 (11%)

Query: 70  LIHVLLQSDMRDVASHVFDKM------------------VIQFGKTYNFFRLFR-----D 106
           ++ V  +  M   A HVFD M                  +++ G++Y+   ++      D
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 107 SLGD-FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ 165
            + D F C  + ++  Y + GK++ +VE    M  +G  L+      L+   V    +  
Sbjct: 62  IVPDVFTC--AIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEG 119

Query: 166 YYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKIL 220
              + + M  KG          L+ G  ++  +E A  + R++ +  G V +      ++
Sbjct: 120 AKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALI 179

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
              C  G++G+A  + D +L VG K N+   ++LIN +CK  ++ +  +L   M ++DL 
Sbjct: 180 DGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLK 239

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           PD   Y  L+DG  + G   +   +    L +G++  VV +++++      GD   A++ 
Sbjct: 240 PDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRL 299

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           +  ML  G  PN + Y  L+ GL + G    A  L+  +L R +  S+  ++++I+G CK
Sbjct: 300 WHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCK 359

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
            G++      +  M + G KPD +    L +G      + +A +   +  +  + P++ +
Sbjct: 360 MGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEM 419

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N+L+ G    K+ +  + L   M    + P+V+T+  LI G   QG L  A   +F+M+
Sbjct: 420 YNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMI 479

Query: 516 KRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGV-------------------- 554
            +G  P+VI  S I+  L++ G+     + + K+++ + V                    
Sbjct: 480 GKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCW 539

Query: 555 --------------APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
                          P+  +YN+ +  L K   ++ A + F  L+     PD  TY T+I
Sbjct: 540 KIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLI 599

Query: 601 CGYCS 605
            G+ +
Sbjct: 600 HGFSA 604



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 197/421 (46%), Gaps = 27/421 (6%)

Query: 89  KMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           KM    G    F R+        G  Y  L + Y ++G ++E+ +I   M    I+ S +
Sbjct: 359 KMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIE 418

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQV 204
           +   L+  L  S  + +   L   M  +G       Y  L+ G   +G ++ AF  + ++
Sbjct: 419 MYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEM 478

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE--- 261
           I +GF PN++ C+KI+  L   G+I  A+ L            +V F  +++  C E   
Sbjct: 479 IGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQ---------KMVDFDLVLDHRCLEDFQ 529

Query: 262 -AKLEK--AFQLYNLMMEMDL---VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
            A + K   +++ + + E  +   +P+ ++Y+I + GL K+G++ +     L        
Sbjct: 530 NADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFT 589

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D   + +++  +   G V  A    D M+N G +PN+ +Y+ L+ GLC+ G L  A  L
Sbjct: 590 PDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRL 649

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F ++ ++ L P+++TY+ LIDG+CKSG  R+   L   M+K G+ P  +  S LING   
Sbjct: 650 FDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCK 709

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              + +A++   +     +   +  F+ L++GC +        KL  +M M      + +
Sbjct: 710 QSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMACPSAGITS 769

Query: 491 H 491
           H
Sbjct: 770 H 770



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 41/288 (14%)

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           +++K   ++G +  A  +F  +     +PSL + +SL+    K G+      +YD M + 
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 418 GLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            + PD   C++++N     G +  A+ F  +  ++    N   +N+L+DG   L      
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQ------------------------------- 501
             +   M    +  + +T T+LI+G   Q                               
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 502 -----GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
                G +  AI +  +MLK GL  ++   +++I+G  K   +  G  +   M +  + P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           D   Y  L++   ++     A  +  Q+  +G+EP ++TYNT++ G C
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLC 288



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/114 (21%), Positives = 60/114 (52%)

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           ++++  A +G + +A+ +F  M K G  P + + ++++  L K       + ++  M R 
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            + PD+    +++N   K   ++ A++   ++   G E + ++YN+++ GY SL
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSL 114


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 230/449 (51%), Gaps = 21/449 (4%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           F  Y  +         + +AF +  +++++   P  +  NKIL  L  +       SL  
Sbjct: 41  FIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQ 100

Query: 238 VL----------------LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            +                 L+G  PN +TF+TLI   C + ++ +A   ++ ++ M    
Sbjct: 101 QMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQL 160

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D + Y  LI GL K G  +   +LL       ++ +VV++S+++D       V  A   Y
Sbjct: 161 DQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLY 220

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             M++ G  PNV++YS LI G    G+L +A  LF ++++  ++P + T++ L+DGFCK 
Sbjct: 221 SEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD 280

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           GK+++G +++  M+K+G+KP+ V    L++G      +  A    +   +  + P++  +
Sbjct: 281 GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSY 340

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N L+DG C++K+  + + LF  M   +I PDV+T+  LI G+   G +S A+ L  +M  
Sbjct: 341 NILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 400

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           RG+ PD+ITYS+I+  L K   +   + +   ++  G+ P++  Y +L++ L K   L+ 
Sbjct: 401 RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLED 460

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           A  +F  L  +G    + TY  +I G+C+
Sbjct: 461 AHNIFEDLLVKGYNITVNTYTVMIHGFCN 489



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 195/361 (54%), Gaps = 9/361 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++GL + G    A  + R+V      PN+V  + I+  +C +  + +A  L+  ++
Sbjct: 165 YGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMV 224

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  PNVVT+S LI+ F    +L+ A  L+N M+  ++ PD+  ++IL+DG  K G++K
Sbjct: 225 SKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 284

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           EG  +    + +G+K +VV + S+MD Y  + +V +A      M   G  P++ SY+ILI
Sbjct: 285 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILI 344

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+  ++ EA  LF ++  + + P ++TY+SLIDG CK GK+     L D M  RG+ 
Sbjct: 345 DGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 404

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD +  S +++ L     +  A+    +     + PN++ +  L+DG C+  R  D   +
Sbjct: 405 PDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNI 464

Query: 476 F--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           F  +L+  YNI   V T+TV+I G  ++G    A+ L  +M      PD +TY  II  L
Sbjct: 465 FEDLLVKGYNIT--VNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522

Query: 534 F 534
           F
Sbjct: 523 F 523



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 221/415 (53%), Gaps = 5/415 (1%)

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
           +G+    FH        G+ PN +T   ++K LC+ GQI  A    D ++ +G + + V 
Sbjct: 105 EGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVG 164

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           + TLI+  CK  +   A  L   +    + P++++YS +IDG+ K   + +  +L    +
Sbjct: 165 YGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMV 224

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
            +G+  +VV +S+++  +  +G +  A+  +++M+     P+V +++IL+ G C+ G++ 
Sbjct: 225 SKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 284

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           E   +F  ++ + ++P+++TY SL+DG+C   ++    S+   M +RG+ PD    ++LI
Sbjct: 285 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILI 344

Query: 431 NGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           +G      + +A+  F +     +IP++  +N+L+DG C+L + +  +KL   M    + 
Sbjct: 345 DGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 404

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PD+IT++ ++  +     +  AI L  ++  +G+ P++ TY+ +I GL KG  +    ++
Sbjct: 405 PDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNI 464

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           F+ +   G    +  Y V+++    +   D AL L  ++ D    PD +TY  II
Sbjct: 465 FEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIII 519



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 187/379 (49%), Gaps = 24/379 (6%)

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
           ++ F+ +     K N + +S++   F     +  AF L++ ++  +  P  I ++ ++  
Sbjct: 26  NTHFNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGS 85

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L K+                     V+  S  M+ + GI  V    Q   +++  G+ PN
Sbjct: 86  LVKSKHYHT----------------VLSLSQQME-FEGINPVLFHFQHPHQLM--GYHPN 126

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
            I+++ LIKGLC +G++ +A      V+    +   + Y +LI G CK G+ R    L  
Sbjct: 127 TITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLR 186

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            +    ++P+ V+ S +I+G+     + DA   + + V   + PN+  ++ L+ G   + 
Sbjct: 187 RVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVG 246

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  D + LF  M + NIKPDV T  +L+ G    G +     +F  M+K+G+ P+V+TY 
Sbjct: 247 QLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 306

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           +++ G    K ++    +   M + GV PDI  YN+L++   K   +D A+ LF ++  +
Sbjct: 307 SLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK 366

Query: 588 GLEPDIITYNTIICGYCSL 606
            + PD++TYN++I G C L
Sbjct: 367 HIIPDVVTYNSLIDGLCKL 385


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 254/536 (47%), Gaps = 51/536 (9%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMS-DMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           + L+E +    + DE+++I  + + ++G    PD+     L+  L D    GQ   L R 
Sbjct: 153 NHLLEGFCEAKRTDEALDILLHRTPELGCV--PDVFSYSILLKSLCDQGKSGQADDLLRM 210

Query: 173 M-RGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC-- 224
           M  G   C      Y  +++G  ++G +  A  + ++++QRG  P++VT N ++  LC  
Sbjct: 211 MAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKA 270

Query: 225 ---------------------------------INGQIGNASSLFDVLLLVGPKPNVVTF 251
                                              GQ   A  +F  +      P+VVT 
Sbjct: 271 RAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 330

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S L+ + CK  K+++A  +++ M      PD+  Y+I+++G    G L +  +L    L 
Sbjct: 331 SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 390

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G+  D   F+ ++ AY   G + +A+  ++ M + G  P+V++Y  +I  LC+ G++ +
Sbjct: 391 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 450

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A   F Q++ + + P    Y+ LI GFC  G L     L   ++  G+  D V  S +IN
Sbjct: 451 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 510

Query: 432 -----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                G + DA   F  +V + L P+  ++N LMDG C + +    +++F  M    I+P
Sbjct: 511 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 570

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +V+ +  L+ G    G +   + LF +ML+RG+ P  I YS II GLF+          F
Sbjct: 571 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKF 630

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             M  +G+A DI  YN++L  L K    D A+ LF +L    ++ +IIT NT+I G
Sbjct: 631 HEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 686



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 147/593 (24%), Positives = 281/593 (47%), Gaps = 54/593 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVI 92
           N ++    K  +   A   FK        P++     ++H L ++   D A     +MV 
Sbjct: 226 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 285

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +     N+              Y+ LI  Y   G+  E+V +F  M    I   PD+V  
Sbjct: 286 KRVLPNNW-------------TYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL--PDVVTL 330

Query: 151 QRLMSCLVDSNSVGQYYKL--CRAMRGKGFCV--YEFLMNGLLRKGVIENAFHMHRQVIQ 206
             LM  L     + +   +    AM+G+   V  Y  ++NG   KG + +   +   ++ 
Sbjct: 331 SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 390

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P+  T N ++K     G +  A  +F+ +   G KP+VVT+ T+I A C+  K++ 
Sbjct: 391 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 450

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A + +N M++  + PD   Y+ LI G    G L +  EL+   ++ G+ LD+V FSS+++
Sbjct: 451 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 510

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               +G V  A   +D  +N G  P+ + Y++L+ G C  G++ +A  +F  ++   +EP
Sbjct: 511 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 570

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
           +++ Y +L++G+CK G++ +G SL+  M++RG+KP  ++ S++I+GL        F++ R
Sbjct: 571 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL--------FEAGR 622

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              +P    F+ + +                      I  D+ T+ +++RG+        
Sbjct: 623 T--VPAKMKFHEMTES--------------------GIAMDICTYNIVLRGLFKNRCFDE 660

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           AI LF ++    +  ++IT + +I G+F+ + +     +F  + R+ + P +  Y++++ 
Sbjct: 661 AIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMIT 720

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            LIKE  ++ A  +F  + + G EP+    N ++      N  +  G + S+I
Sbjct: 721 NLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 773



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 194/383 (50%), Gaps = 8/383 (2%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILI 290
           A + F  LL  G + N++  + L+  FC+  + ++A   L +   E+  VPD+  YSIL+
Sbjct: 133 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 192

Query: 291 DGLFKAGRLKEGNELLLTALDRGL--KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
             L   G+  + ++LL    + G     +VV +++V+D +   GDV +A   +  M+  G
Sbjct: 193 KSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 252

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++++Y+ ++  LC+   + +A     Q++ +R+ P+  TY++LI G+  +G+ ++  
Sbjct: 253 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 312

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            ++  M +  + PD V  S+L+      G + +A   F         P++F +N +++G 
Sbjct: 313 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 372

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
                  D   LF LM    I PD  T  VLI+  A+ G L  A+++F +M   G+ PDV
Sbjct: 373 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 432

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY  +I  L +   +   +  F  M   GVAPD   YN L+       +L  A +L  +
Sbjct: 433 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 492

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + + G+  DI+ +++II   C L
Sbjct: 493 IMNNGMHLDIVFFSSIINNLCKL 515



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 194/388 (50%), Gaps = 11/388 (2%)

Query: 243 GPK---PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           GP+   P   T++ L++   +  + E A   +  ++   L  ++II + L++G  +A R 
Sbjct: 106 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRT 165

Query: 300 KEGNELLL-TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL--PNVISY 356
            E  ++LL    + G   DV  +S ++ +    G  G+A      M  GG +  PNV++Y
Sbjct: 166 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 225

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + +I G  ++G + +AC LF +++ R + P L+TY+S++   CK+  +    +    M+ 
Sbjct: 226 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 285

Query: 417 RGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           + + P+    + LI      G   +A+R F +  R +++P++   + LM   C+  +  +
Sbjct: 286 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 345

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              +F  M M    PDV ++ +++ G A++G L     LF  ML  G+ PD  T++ +I 
Sbjct: 346 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 405

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
                  +   + +F  M  +GV PD+  Y  ++  L +   +D A++ F Q+ D+G+ P
Sbjct: 406 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 465

Query: 592 DIITYNTIICGYCSLNSCLIDGYFKSQI 619
           D   YN +I G+C+  S L      S+I
Sbjct: 466 DKYAYNCLIQGFCTHGSLLKAKELISEI 493



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 139/300 (46%), Gaps = 12/300 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS-VGQYYKLCR-- 171
           +S +I N  ++G++ ++  IF    ++G++  PD V  + + L+D    VG+  K  R  
Sbjct: 505 FSSIINNLCKLGRVMDAQNIFDLTVNVGLH--PDAV--VYNMLMDGYCLVGKMEKALRVF 560

Query: 172 -AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            AM   G       Y  L+NG  + G I+    + R+++QRG  P+ +  + I+  L   
Sbjct: 561 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEA 620

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+   A   F  +   G   ++ T++ ++    K    ++A  L+  +  M++  ++I  
Sbjct: 621 GRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 680

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + +IDG+F+  R++E  +L  +     L   VV +S ++   +  G V  A   +  M N
Sbjct: 681 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 740

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PN    + +++ L ++  +V A     ++  R      LT   L+D F   G  R+
Sbjct: 741 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 800


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 218/439 (49%), Gaps = 5/439 (1%)

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           M  +    Y  L+N     G +  +      +++ GF P+       +   C  G + +A
Sbjct: 67  MPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHA 126

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             LF ++ L G      T++ L++  C    + +A  ++  M      PD  +Y+ ++ G
Sbjct: 127 CRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHG 186

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L  AGR +E   LL  A+  G + +VVV+++++D Y  +GD+  AV  ++RM   G  PN
Sbjct: 187 LCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPN 246

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V +Y+ LI G C+  +L  A  LF +++   L P+++TY++LI G C  G+L   + L  
Sbjct: 247 VRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQ 306

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           +M   GL P+   CS+LI+ L     +G+A       ++  +  N  ++ +L+DG C+  
Sbjct: 307 SMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAG 366

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R     +L   +      PD  T++ LI G+  Q  LS A+L+   M+++G+ P  +TY+
Sbjct: 367 RFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYT 426

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            II  L +         +   M   G+ PD+  Y + +     E  ++ A  +   + D 
Sbjct: 427 IIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDH 486

Query: 588 GLEPDIITYNTIICGYCSL 606
           G+ P+++TYN +ICGY +L
Sbjct: 487 GVCPNLVTYNALICGYANL 505



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 212/461 (45%), Gaps = 34/461 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+  +  Y R G +  +  +F  M   G   +      L+  L  +  V +   +   M+
Sbjct: 110 YTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQ 169

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      VY  +++GL   G    A  +    +  GF PN+V  N ++   C  G + 
Sbjct: 170 ADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLE 229

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F+ + + G  PNV T++ LI+ FCK  KL++A  L++ M++  LVP+++ Y+ LI
Sbjct: 230 LAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALI 289

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G    G+L     LL +  + GL  +    S ++DA      VG A      ++  G  
Sbjct: 290 QGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIK 349

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            N I Y+ LI GLC+ GR   A  L   ++ +   P   TYSSLIDG C+  +L +   +
Sbjct: 350 VNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLV 409

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            D+M+++G++P  V  +++I+ L+                              R   A 
Sbjct: 410 LDDMMEKGVQPSPVTYTIIIDELV------------------------------REVGAD 439

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
            + K+   M    IKPDV T+T+ +R    +G +  A  +   M+  G+ P+++TY+A+I
Sbjct: 440 GSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALI 499

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            G       S     FK M  NG  P+   Y VLL +LIK+
Sbjct: 500 CGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKK 540



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/557 (23%), Positives = 242/557 (43%), Gaps = 67/557 (12%)

Query: 75  LQSDMRDVASHVFDKMVIQF---GKTYNFFRLFRDSLGD-FGCD---YSFLIENYVRIGK 127
           +Q+D      HV+  MV      G+T     L  D++ + F  +   Y+ LI+ Y  +G 
Sbjct: 168 MQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGD 227

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEF 183
           ++ +V++F  M   G   +      L+S    S  + +   L   M   G       Y  
Sbjct: 228 LELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTA 287

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+ G    G ++ A+ + + +   G VPN  TC+ ++  LC + ++G A  L   L+  G
Sbjct: 288 LIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKG 347

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            K N + +++LI+  CK  +   A +L   ++    VPD   YS LIDGL +   L E  
Sbjct: 348 IKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAM 407

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +L   +++G++   V ++ ++D  V       + +  D+M+  G  P+V +Y+I ++  
Sbjct: 408 LVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSY 467

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD- 422
           C +GR+ +A  +   ++   + P+L+TY++LI G+   G     FS + +M+  G KP+ 
Sbjct: 468 CHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNE 527

Query: 423 ---AVVCSLLI------------------------NGLMGDALRFFFQS----------- 444
               V+  LLI                        +GL+ + ++    S           
Sbjct: 528 ESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTS 587

Query: 445 --------------VRM---TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                         + M    L P+  ++ +++  CCRLK  T+ +     M      P 
Sbjct: 588 LCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQ 647

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           + ++  +I  +  +GS+ +A  +F  ML +    + I +  +I GL +   ++    +  
Sbjct: 648 LESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLS 707

Query: 548 LMERNGVAPDIAIYNVL 564
           +ME     P  A+Y  L
Sbjct: 708 VMEEKNYRPSDALYARL 724


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 263/542 (48%), Gaps = 60/542 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+     G+   +  +   M   GI     L   +M     +   GQ  +L   MR
Sbjct: 132 YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMR 191

Query: 175 GKGFC---------VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
           G   C         V + L+ G   K V+ N F+   +++ +G  P + T   ++K LC+
Sbjct: 192 GVYSCEPTFRSYNVVLDVLLAGNCPK-VVPNVFY---EMLSKGISPTVYTFGVVMKALCL 247

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF--------------------------- 258
             ++ +A +L   +   G  PN + + TLI+A                            
Sbjct: 248 VNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNT 307

Query: 259 --------CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
                   CK  ++ +A +L + M+     P+   Y +L+ GL + G++ E   LL    
Sbjct: 308 FNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL---- 363

Query: 311 DRGLKLDVVVFSSVMDAYVGIG--DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
           ++    +VV+F+++++ YV  G  D  +AV  ++ ML+ G  P++ +Y+ LI GLC++G 
Sbjct: 364 NKVPNPNVVLFNTLINGYVSRGRLDEAKAVM-HESMLSVGCGPDIFTYNTLILGLCKKGY 422

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           LV A  L  ++ I+  EP+++TY+ LID FCK G+L +  ++ D M  +GL  +AV  + 
Sbjct: 423 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 482

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LI+ L     + DAL  F         P++F FN+L+ G C++ +  + + L+  M +  
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 542

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           +  + IT+  LI     +G++  A+ L   ML RG   D ITY+ +I  L +  NI  GL
Sbjct: 543 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGL 602

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +F+ M   G+ P+    N+L+N L +  N+  AL+    +  RGL PDI+TYN++I G 
Sbjct: 603 ALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGL 662

Query: 604 CS 605
           C 
Sbjct: 663 CK 664



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 212/425 (49%), Gaps = 10/425 (2%)

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++GL +   I  A  +  +++ RGF PN  T   ++  LC  G++  A  L + +    P
Sbjct: 312 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----P 367

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            PNVV F+TLIN +    +L++A   ++  M+ +   PD+  Y+ LI GL K G L    
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL+     +G + +V+ ++ ++D +   G +  A    D M   G   N + Y+ LI  L
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 487

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+  ++ +A  +FG +  +  +P + T++SLI G CK  K  +   LY +M+  G+  + 
Sbjct: 488 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 547

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  + LI+     G M +AL+     +      +   +N L+   CR       + LF  
Sbjct: 548 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 607

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    + P+ I+  +LI G+   G++  A+     M+ RGLTPD++TY+++I+GL K   
Sbjct: 608 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 667

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
               L++F  ++  G+ PD   YN L++   KE   D A  L  +  D G  P+ +T+  
Sbjct: 668 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 727

Query: 599 IICGY 603
           ++  +
Sbjct: 728 LVSNF 732



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 197/389 (50%), Gaps = 6/389 (1%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFH-MHRQVIQRGFVP 211
           LM  L     V +   L   +      ++  L+NG + +G ++ A   MH  ++  G  P
Sbjct: 346 LMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 405

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           +I T N ++  LC  G + +A  L + + + G +PNV+T++ LI+ FCKE +LE+A  + 
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 465

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           + M    L  + + Y+ LI  L K  ++++   +      +G K D+  F+S++     +
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 525

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
                A+  Y  ML  G + N I+Y+ LI    ++G + EA  L   +L R      +TY
Sbjct: 526 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 585

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
           + LI   C++G +  G +L+++M+ +GL P+ + C++LINGL     +  AL F    + 
Sbjct: 586 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 645

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             L P++  +N+L++G C+  RA + + LF  + +  I PD IT+  LI     +G    
Sbjct: 646 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 705

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           A LL  + +  G  P+ +T+  ++    K
Sbjct: 706 AHLLLSRGVDSGFIPNEVTWYILVSNFIK 734



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 182/349 (52%), Gaps = 12/349 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ LI  YV  G++DE+  +  + S + +   PD+     L+  L     +    +L   
Sbjct: 374 FNTLINGYVSRGRLDEAKAVM-HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 432

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ KG       Y  L++   ++G +E A ++  ++  +G   N V  N ++  LC + +
Sbjct: 433 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 492

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A ++F  +   G KP++ TF++LI   CK  K E+A  LY  M+   ++ + I Y+ 
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 552

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    + G ++E  +L+   L RG  LD + ++ ++ A    G++ + +  ++ M++ G
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN IS +ILI GLC+ G +  A      ++ R L P ++TY+SLI+G CK+G+ ++  
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPN 452
           +L+D +   G+ PDA+  + LI+     G+  DA     + V    IPN
Sbjct: 673 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 721



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 162/334 (48%), Gaps = 10/334 (2%)

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P    Y++++D L      K    +    L +G+   V  F  VM A   + +V  A   
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 257

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
              M   G +PN I Y  LI  L + GR+ E   L  ++L+    P + T++  I G CK
Sbjct: 258 LKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 317

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MG--DALRFFFQSVRMTLIPNLFIF 456
             ++ +   L D M+ RG  P++    +L++GL  MG  D  R     V     PN+ +F
Sbjct: 318 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN---PNVVLF 374

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIK--PDVITHTVLIRGIASQGSLSSAILLFFQM 514
           NTL++G     R  D  K  M   M ++   PD+ T+  LI G+  +G L SA  L  +M
Sbjct: 375 NTLINGYVSRGR-LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 433

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
             +G  P+VITY+ +I    K   +    ++   M   G+A +   YN L++ L K+  +
Sbjct: 434 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 493

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
             AL +FG ++ +G +PDI T+N++I G C +N 
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 527



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 9/300 (3%)

Query: 112 GCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           GC+     Y+ LI+ + + G+++E+  +   MS  G+ L+      L+S L     V   
Sbjct: 437 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 496

Query: 167 YKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
             +   M  KG       +  L+ GL +    E A  +++ ++  G + N +T N ++  
Sbjct: 497 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 556

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
               G +  A  L + +L  G   + +T++ LI A C+   +EK   L+  MM   L P+
Sbjct: 557 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 616

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
            I  +ILI+GL + G ++   E L   + RGL  D+V ++S+++     G    A+  +D
Sbjct: 617 NISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFD 676

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           ++   G  P+ I+Y+ LI   C++G   +A  L  + +     P+ +T+  L+  F K G
Sbjct: 677 KLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 107/223 (47%), Gaps = 4/223 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI    ++ K +E++ ++  M   G+  +      L+   +   ++ +  KL   M 
Sbjct: 515 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 574

Query: 175 GKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G  + +   NGL+    R G IE    +   ++ +G  PN ++CN ++  LC  G I 
Sbjct: 575 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 634

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A      ++  G  P++VT+++LIN  CK  + ++A  L++ +    + PD I Y+ LI
Sbjct: 635 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 694

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
               K G   + + LL   +D G   + V +  ++  ++  GD
Sbjct: 695 SWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 217/437 (49%), Gaps = 40/437 (9%)

Query: 204 VIQRGFVPNIVTCNKILKR-----------------------------------LCINGQ 228
           + ++GFVPNI TCN++L                                     LC  G+
Sbjct: 172 IKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGK 231

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A      +  +G KPNVVT++T+I+  C   K ++A  ++  M +  L PD   Y+ 
Sbjct: 232 LKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNS 291

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            I GL K GRL+E + L+   L+ GL  + V +++++D Y   GD+ +A    D M++ G
Sbjct: 292 FISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKG 351

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            + ++++Y++ I  L  +GR+ +A  +  ++  + + P  +T++ LI+G+C+ G  +  F
Sbjct: 352 IMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAF 411

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L D M+ +G++P  V  + LI  L     M +A   F +  +  L+P++ +FN L+DG 
Sbjct: 412 GLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGH 471

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C         +L   M    + PD IT+  L++G   +G +  A  L  +M +RG+ PD 
Sbjct: 472 CANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDH 531

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           I+Y+ +I G  K  ++     +   M   G  P I  YN L+  L K    + A +L  +
Sbjct: 532 ISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKE 591

Query: 584 LTDRGLEPDIITYNTII 600
           +  +G+ PD  TY +II
Sbjct: 592 MVSKGITPDDSTYLSII 608



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 226/456 (49%), Gaps = 9/456 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YYKLC 170
           +  L+  Y  + K +E++E F  + + G   + +   +++S  +  N        Y ++ 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           R         +  ++N L ++G ++ A      +   G  PN+VT N I+   C+ G+  
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F  +   G +P+  T+++ I+  CKE +LE+A  L   M+E  LVP+ + Y+ LI
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG    G L +        + +G+   +V ++  + A    G +G A      M   G +
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++++ILI G C+ G    A GL  +++ + ++P+L+TY+SLI    K  ++++  +L
Sbjct: 389 PDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADAL 448

Query: 411 YDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  + + GL PD +V + LI     NG +  A +   +   M ++P+   +NTLM G CR
Sbjct: 449 FSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCR 508

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +  +  +L   M    IKPD I++  LI G + +G +  A  +  +M+  G  P ++T
Sbjct: 509 EGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILT 568

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           Y+A+I GL K +       + K M   G+ PD + Y
Sbjct: 569 YNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTY 604



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 193/363 (53%), Gaps = 5/363 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PN+ T + +++ F K  + + A+ LY  M  M++   L  ++I+I+ L K G+LK+  E 
Sbjct: 179 PNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEF 238

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           +      G+K +VV +++++  +   G   RA   +  M + G  P+  +Y+  I GLC+
Sbjct: 239 IGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCK 298

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +GRL EA GL  ++L   L P+ +TY++LIDG+C  G L   ++  D MI +G+    V 
Sbjct: 299 EGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVT 358

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            +L I+ L     MGDA     +     ++P+    N L++G CR   A     L   M 
Sbjct: 359 YNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMV 418

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              I+P ++T+T LI  +  +  +  A  LF ++ + GL PD+I ++A+I G     NI 
Sbjct: 419 GKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNID 478

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               + K M+   V PD   YN L+    +E  ++ A +L  ++  RG++PD I+YNT+I
Sbjct: 479 RAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLI 538

Query: 601 CGY 603
            GY
Sbjct: 539 SGY 541



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 147/290 (50%), Gaps = 10/290 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDM---GIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           Y+ LI+ Y   G +D++   +AY  +M   GI  S       +  L     +G    + +
Sbjct: 324 YNALIDGYCNKGDLDKA---YAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIK 380

Query: 172 AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            MR KG       +  L+NG  R G  + AF +  +++ +G  P +VT   ++  L    
Sbjct: 381 EMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRN 440

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A +LF  +   G  P+++ F+ LI+  C    +++AFQL   M  M ++PD I Y+
Sbjct: 441 RMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYN 500

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+ G  + G+++E  +LL     RG+K D + +++++  Y   GD+  A +  D M+  
Sbjct: 501 TLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTT 560

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           GF P +++Y+ LI+GLC+      A  L  +++ + + P   TY S+I+ 
Sbjct: 561 GFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEA 610



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 176/399 (44%), Gaps = 34/399 (8%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT---FSTLINAFCKEAKLEK 266
           +P+      +++RL ++    N  ++FD L L   + +  T   F  L+ A+C+  K  +
Sbjct: 106 LPSPKPSINLIQRLILSPTCTN-RTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNE 164

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A + + L+ E   VP++   + ++    K  R +    L        ++  +  F+ +++
Sbjct: 165 ALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMIN 224

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G + +A +    M   G  PNV++Y+ +I G C +G+   A  +F  +  + LEP
Sbjct: 225 VLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEP 284

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
              TY+S I G CK G+L +   L              +C +L  GL             
Sbjct: 285 DCYTYNSFISGLCKEGRLEEASGL--------------ICKMLEGGL------------- 317

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              +PN   +N L+DG C              M    I   ++T+ + I  +  +G +  
Sbjct: 318 ---VPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGD 374

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +  +M ++G+ PD +T++ +I+G  +  +      +   M   G+ P +  Y  L+ 
Sbjct: 375 ADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIY 434

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           +L K   +  A  LF ++   GL PDII +N +I G+C+
Sbjct: 435 VLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCA 473



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 109/226 (48%), Gaps = 8/226 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           ++ LI  Y R G    +  +   M   GI   P LV    L+  L   N + +   L   
Sbjct: 394 HNILINGYCRCGDAKRAFGLLDEMVGKGI--QPTLVTYTSLIYVLGKRNRMKEADALFSK 451

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           ++ +G      V+  L++G    G I+ AF + +++     +P+ +T N +++  C  G+
Sbjct: 452 IQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGK 511

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L D +   G KP+ ++++TLI+ + K   ++ AF++ + MM     P ++ Y+ 
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNA 571

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           LI GL K    +   ELL   + +G+  D   + S+++A   + D+
Sbjct: 572 LIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDL 617


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 267/555 (48%), Gaps = 48/555 (8%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           + G+     +LF D   D  C     Y+ LI      G+  E++ +F  M + G   +  
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
               L+  L   N + +  K+   M  KG       Y  L++G  ++G+I++AF +   +
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
                 PN  T N+++  LC   ++  A +L + +L     P+++T+++LI+  CK   L
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E A++L +LM E  LVPD   YS+ ID L K GR++E   L  +   +G+K + V+++++
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D Y  +G +  A    +RMLN   LPN  +Y++LI+GLC++ ++ EA  L  ++L   +
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALR 439
           +P+++TY+ LI    K G       ++++M+  G +PD     A + +    G++ +   
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDD 635

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRL---KRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
              +     ++P+L  +  L+DG  RL    RA D +K  +  G    KP +   ++LI+
Sbjct: 636 VIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG---CKPSLYIVSILIK 692

Query: 497 GIASQGSLSS-----------------------------AILLFFQMLKRGLTPDVITYS 527
            ++ +  +                               A+ LF +M++ G T DV  Y 
Sbjct: 693 NLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYG 752

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           A+I G  + + +     +   M+  G++P   IYN LL+   K      A++L   + + 
Sbjct: 753 ALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVEN 812

Query: 588 GLEPDIITYNTIICG 602
           GL P + +Y  ++CG
Sbjct: 813 GLLPLLESYKLLVCG 827



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 201/403 (49%), Gaps = 5/403 (1%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +++     PNI T N ++   C  G +  A      ++  G  P+  T+++LI   C+  
Sbjct: 184 ELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNK 243

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            ++ A++++ +M +     + + Y+ LI GL +AGR+ E  +L     +      V  ++
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            ++ A  G G    A+  ++ M   G  PNV +Y++LI GLC++ ++ EA  +  ++  +
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            L PS++TY++LIDG+CK G + D F + D M      P+    + LI GL     +  A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           +    + +   L P+L  +N+L+ G C++       +L  LM    + PD  T++V I  
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +  +G +  A  LF  +  +G+  + + Y+A+I G  K   I V   + + M  +   P+
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              YNVL+  L KE  +  A  L  ++   G++P ++TY  +I
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 206/433 (47%), Gaps = 7/433 (1%)

Query: 180 VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           +Y F  ++NG  + G +  A     +++Q G  P+  T   ++   C N  + NA  +F 
Sbjct: 194 IYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFL 253

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
           ++   G + N V+++ LI+  C+  ++ +A +L+  M E +  P +  Y++LI  L  +G
Sbjct: 254 IMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           R  E   L     ++G + +V  ++ ++D       +  A +    M   G +P+V++Y+
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G C++G + +A  +   +      P+  TY+ LI G CK  K+    +L + M++R
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            L P  +  + LI+G      +  A R         L+P+ + ++  +D  C+  R  + 
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             LF  +    +K + + +T LI G    G +  A  L  +ML     P+  TY+ +I G
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K K +     +   M   GV P +  Y +L+  ++K+   D ALK+F  +   G +PD
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613

Query: 593 IITYNTIICGYCS 605
           + TY   +  Y S
Sbjct: 614 VCTYTAFLHAYFS 626



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 212/460 (46%), Gaps = 25/460 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLC 170
           Y+ LI    ++  ++ +  + + M++ G  L PD  Q   S  +D+      V +   L 
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENG--LVPD--QWTYSVFIDTLCKEGRVEEAGTLF 497

Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            +++ KG      +Y  L++G  + G I+ A+ +  +++    +PN  T N +++ LC  
Sbjct: 498 DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKE 557

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            ++  ASSL   +L +G KP VVT++ LI    K+   + A +++N M+ +   PD+  Y
Sbjct: 558 KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +  +   F  G L+E ++++    + G+  D+V ++ ++D Y  +G   RA      M++
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVD 677

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P++   SILIK L  + R+ E     G   +  +       S  I    K+ +   
Sbjct: 678 TGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVN------SVDIADVWKTLEYEI 731

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              L++ M++ G   D  +   LI G      + +A           + P+  I+N+L+D
Sbjct: 732 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
            CC+L    + V+L   M    + P + ++ +L+ G+  +GS   A  +F  +L  G   
Sbjct: 792 CCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNY 851

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA--PDIA 559
           D + +  +I GL K   +     +  +ME        DIA
Sbjct: 852 DEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIA 891



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 140/272 (51%), Gaps = 5/272 (1%)

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           Y  +LN    PN+ +++ ++ G C+ G +VEA     +++   L P   TY+SLI G C+
Sbjct: 182 YLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCR 241

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
           +  + + + ++  M ++G + + V  + LI+GL     + +AL+ F         P +  
Sbjct: 242 NKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRT 301

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +  L+       R  + + LF  M     +P+V T+TVLI G+  +  +  A  +  +M 
Sbjct: 302 YTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS 361

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           ++GL P V+TY+A+I G  K   I     +  LME N   P+   YN L+  L K+  + 
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH 421

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            A+ L  ++ +R L P +ITYN++I G C +N
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 148/363 (40%), Gaps = 34/363 (9%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           R+  D+       Y+ LIE   +  K+ E+  + A M  MG+  +      L+  ++   
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593

Query: 162 SVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           +     K+   M   G+    C Y   ++    +G++E    +  ++ + G +P++VT  
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL------------- 264
            ++      G    A      ++  G KP++   S LI     E ++             
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713

Query: 265 ----------------EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
                           E A +L+  M+E     D+ IY  LI G  +  RL+E   L+  
Sbjct: 714 NVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 773

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
             +RG+     +++S++D    +G    AV+  D M+  G LP + SY +L+ GL  +G 
Sbjct: 774 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 833

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA-VVCS 427
             +A  +F  +L        + +  LIDG  K   + +   L D M ++     A + C+
Sbjct: 834 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACA 893

Query: 428 LLI 430
            L+
Sbjct: 894 ALM 896


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 236/490 (48%), Gaps = 11/490 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE--- 182
           G+I +++E+   MS  G    P +   ++     S       ++  AM  KG C  +   
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-CTLDTGN 183

Query: 183 --FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
              ++N +  +G ++ A  + R++   G   +IV+ N +LK LC+  + G+   L D ++
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV 243

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            V   PN+VTF+TLI   C+    E+  ++   M E    PD+ +Y+ +IDG+ K G L+
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
             NE+L      GLK +VV +++V+           A +    M       + ++++IL+
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILV 363

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              CQ G +     L  Q+L     P ++TY+++I+GFCK G + +   L  +M   G K
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  ++++ GL       DA     Q ++    PN   FNTL++  C+       ++L
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M +    PD+I+++ +I G+   G    A+ L   M+ +G++P+ I YS+I   L +
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              ++  + MF  ++   +  D  +YN +++ L K    D A+  F  +   G  P+  T
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 596 YNTIICGYCS 605
           Y  +I G  S
Sbjct: 604 YTMLIKGLAS 613



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 179/397 (45%), Gaps = 5/397 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN  T   +++ LC  G+I +A  + D +   G  P    +  ++ A C+      + ++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M       D    +++++ + + G + E   LL      G + D+V +++V+     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
               G   +  D M+     PN+++++ LI  LC+ G       +  Q+      P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSV 445
           Y+++IDG CK G L     + + M   GLKP+ V  + ++ GL       +A     +  
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +     +   FN L+D  C+       ++L   M  +   PDVIT+T +I G   +G + 
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A++L   M   G  P+ ++Y+ ++ GL           +   M + G  P+   +N L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           N L K+  ++ A++L  Q+   G  PD+I+Y+T+I G
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 125/239 (52%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG  ++G+I+ A  + + +   G  PN V+   +LK LC  G+  +A  L   +
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PN VTF+TLIN  CK+  +E+A +L   M+     PDLI YS +IDGL KAG+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E  ELL   +++G+  + +++SS+  A    G V + +Q +D + +     + + Y+ +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           I  LC++     A   F  ++     P+  TY+ LI G    G  ++   L   +  RG
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 3/149 (2%)

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G CR   A        L     + P+  T   ++RG+ ++G ++ A+ +  +M 
Sbjct: 82  YNAMVAGYCR---AGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            +G  P    Y  I+    +       + + + M   G   D    N++LN + ++  +D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            A+ L  +L   G E DI++YN ++ G C
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLC 227



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 1/153 (0%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN + F  ++ G C   R  D +++   M      P    + V++      G   +++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
              M  +G T D    + +++ + +   +   + + + +   G   DI  YN +L  L  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
                   +L  ++      P+I+T+NT+I GY
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLI-GY 260


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/587 (25%), Positives = 257/587 (43%), Gaps = 86/587 (14%)

Query: 100 FFRLFRD---SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
           F R+ RD    +    C YS LI  + R+G ++     F  +   G  +   ++ +L++ 
Sbjct: 79  FNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNG 138

Query: 157 LVDSNSVGQYYK------------------------LCRAMRGK---------------- 176
           L D   VG+                           LC   R +                
Sbjct: 139 LCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWS 198

Query: 177 ---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  ++NG   +G ++  +++  +++ RG  P++VT   ++  LC       A 
Sbjct: 199 CPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAE 258

Query: 234 SLFDVLL-----------------------------------LVGPKPNVVTFSTLINAF 258
           ++F  ++                                     GPKPN  T+ +L+N  
Sbjct: 259 AVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYL 318

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           CK  +  +A   ++ M+   + P +  Y I++ G    G L E ++LL   +  G+  + 
Sbjct: 319 CKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNH 378

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
            +F+    AY   G + +A+  +++M   G  P+ +SY  LI  LC+ GR+ +A   F Q
Sbjct: 379 HIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQ 438

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-----DAVVCSLLINGL 433
           ++   + P ++ +SSL+ G C   K      L+  M+  G+ P     + ++C+L   G 
Sbjct: 439 MINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGR 498

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + +  R       M + P++  +NTL+DG C      +  KL   M    +KPD  ++  
Sbjct: 499 VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNT 558

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L+ G    G + SA   F +ML  G+TP V+TY+ I+HGLF+ K  S    ++  M  +G
Sbjct: 559 LLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 618

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              DI  YN++LN L K   +D A+K+F  L  +GL+ +IIT+N +I
Sbjct: 619 TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMI 665



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/522 (24%), Positives = 250/522 (47%), Gaps = 18/522 (3%)

Query: 93  QFGKTYNFFRLFRD-SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           Q  K YN F    D  +      Y+ +I+   +    D +  +F  M D G+  + D   
Sbjct: 218 QVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTY- 276

Query: 152 RLMSCLVDSN-SVGQYYKLCR---AMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQ 203
              +CL+    S+G++ ++ R    M   G     C Y  L+N L + G    A      
Sbjct: 277 ---NCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDS 333

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +I +G  P++ T   +L      G +     L ++++  G  PN   F+   +A+ K   
Sbjct: 334 MIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGI 393

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           ++KA  ++N M +  L PD + Y  LID L K GR+ +        ++ G+  D+VVFSS
Sbjct: 394 IDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSS 453

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++     +    +  + +  MLN G  PN++ ++ ++  LC++GR++E   L   +    
Sbjct: 454 LVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMG 513

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           + P +++Y++LIDG C +G + +   L + M+  GLKPD+   + L++G      +  A 
Sbjct: 514 VRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAY 573

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F + +   + P +  +NT++ G  + KR ++  +L++ M     K D+ T+ +++ G+
Sbjct: 574 SHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGL 633

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                +  AI +F  +  +GL  ++IT++ +I  L KG      + +F  +  NG+  ++
Sbjct: 634 CKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNV 693

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             Y +++  LI+E +L+    LF  +   G  P+    N ++
Sbjct: 694 VTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 735



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 194/397 (48%), Gaps = 19/397 (4%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE-------AKLEKAFQLYNLMME---MD 278
           +G+A  LFD LL      +VV F+ L+ A  +        ++ E    L+N M+    + 
Sbjct: 30  LGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIK 89

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           + P+   YSILI    + G L+ G       L  G ++D +V + +++       VG A+
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 339 QT-YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL---IRRLEPSLLTYSSL 394
                RM   G +P+ +SY+IL+KGLC + R  EA  L   +    +    P++++YS++
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTL 449
           I+GF   G++   ++L+  M+ RG+ PD V  + +I+G     L   A   F Q +   +
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            PN+  +N L+ G   + +  + V++   M     KP+  T+  L+  +   G    A  
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
            F  M+ +G+ P V TY  ++HG      +S    +  LM  NG++P+  I+N+  +   
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           K   +D A+ +F ++  +GL PD ++Y  +I   C L
Sbjct: 390 KCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKL 426



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 237/535 (44%), Gaps = 66/535 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++     Y + G ID++++IF  M   G  LSPD V                        
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQG--LSPDAVS----------------------- 415

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++ L + G +++A     Q+I  G  P+IV  + ++  LC   +      
Sbjct: 416 ------YGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEE 469

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF  +L VG  PN+V F+T++   CKE ++ +  +L + +  M + PD+I Y+ LIDG  
Sbjct: 470 LFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHC 529

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            AG + E ++LL   +  GLK D   +++++  Y   G +  A   + +ML+ G  P V+
Sbjct: 530 LAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVV 589

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ ++ GL Q  R  EA  L+  ++    +  + TY+ +++G CKS  + +   ++ N+
Sbjct: 590 TYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL 649

Query: 415 IKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
             +GL+ + +  +++I  L+      DA+  F       L+ N+  +  +++        
Sbjct: 650 CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSL 709

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +   LF  M      P+      L+R +  +G +S A     ++ +R  + +  T S +
Sbjct: 710 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSML 769

Query: 530 I----------HG------------------LFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           I          H                   + K + I     +F+ M   G+ PD+  Y
Sbjct: 770 ISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTY 829

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
           N +L+ L +      A +L+  + +   + +I TYN I+ G C  N   +D  FK
Sbjct: 830 NTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNC--VDEAFK 882



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 185/441 (41%), Gaps = 85/441 (19%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNL-------------------------------- 273
           PN  T+S LI  FC+   LE  F  + L                                
Sbjct: 92  PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151

Query: 274 ----MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL----------------------- 306
               M E+  +PD + Y+IL+ GL    R +E  ELL                       
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 307 ---------------LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
                          L  +DRG+  DVV +++V+D         RA   + +M++ G  P
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N+ +Y+ LI G    G+  E   +  ++     +P+  TY SL++  CK+G+ R+    +
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331

Query: 412 DNMIKRGLKPDAVVCSLLINGL--------MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           D+MI +G+KP      ++++G         M D L      V   + PN  IFN      
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLM---VANGISPNHHIFNIFFSAY 388

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            +       + +F  M    + PD +++  LI  +   G +  A + F QM+  G+TPD+
Sbjct: 389 AKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDI 448

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + +S++++GL           +F  M   G+ P+I  +N +L  L KE  +    +L   
Sbjct: 449 VVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDS 508

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           +   G+ PD+I+YNT+I G+C
Sbjct: 509 IECMGVRPDVISYNTLIDGHC 529



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/491 (23%), Positives = 227/491 (46%), Gaps = 10/491 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S L+     + K ++  E+F  M ++GI+ +      ++  L     V +  +L  ++ 
Sbjct: 451 FSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIE 510

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++G    G I+ A  +   ++  G  P+  + N +L   C  G+I 
Sbjct: 511 CMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRID 570

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A S F  +L  G  P VVT++T+++   +  +  +A +LY  M+      D+  Y+I++
Sbjct: 571 SAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIIL 630

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K+  + E  ++      +GL+L+++ F+ ++ A +  G    A+  +  +   G +
Sbjct: 631 NGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLV 690

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            NV++Y ++++ L ++G L E   LF  +      P+    ++L+      G +    + 
Sbjct: 691 QNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAY 750

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC--RLKR 468
              + +R    +A   S+LI+    D     +Q    +L     I N         + +R
Sbjct: 751 LSKLDERNFSVEASTTSMLISIFSSDE----YQHHAKSLPKKYRILNEANSSALIKKARR 806

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             D   LF  M M  + PDV+T+  ++ G+   G  S A  L+  M+      ++ TY+ 
Sbjct: 807 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           I++GL K   +     MF+ +   G+  +I  +N+++  L+K    + A+ LF  +   G
Sbjct: 867 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926

Query: 589 LEPDIITYNTI 599
           L PD++TY  +
Sbjct: 927 LVPDVVTYRLV 937



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/576 (20%), Positives = 250/576 (43%), Gaps = 78/576 (13%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMS-- 155
           F ++ +  L      Y  LI+   ++G++D++   F  M + G+  +PD+V    L+   
Sbjct: 401 FNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV--TPDIVVFSSLVYGL 458

Query: 156 CLVDSNSVGQ--YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
           C VD     +  ++++           +  ++  L ++G +     +   +   G  P++
Sbjct: 459 CTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDV 518

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           ++ N ++   C+ G I  AS L + ++ VG KP+  +++TL++ +CK  +++ A+  +  
Sbjct: 519 ISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRK 578

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M+   + P ++ Y+ ++ GLF+  R  E  EL L  ++ G K D+  ++ +++       
Sbjct: 579 MLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNC 638

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR---------LVEACGLFGQVLIRRL 384
           V  A++ +  + + G   N+I+++I+I  L + GR          + A GL   V+  RL
Sbjct: 639 VDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRL 698

Query: 385 -------EPSLLTYSSLIDGFCKSGKL--------------------RDGFSLYDNMIKR 417
                  E SL  + SL     K+G                      R G  L   + +R
Sbjct: 699 VVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYL-SKLDER 757

Query: 418 GLKPDAVVCSLLIN---------------------------------GLMGDALRFFFQS 444
               +A   S+LI+                                   + DA   F + 
Sbjct: 758 NFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREM 817

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           +   L P++  +NT++ G  +  R ++  +L++ M     + ++ T+ +++ G+     +
Sbjct: 818 LMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCV 877

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  +F  +  +GL  ++IT++ +I  L KG      + +F  +  NG+ PD+  Y ++
Sbjct: 878 DEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLV 937

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              LI+E +L+    LF  +   G   D    N ++
Sbjct: 938 AENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALV 973



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/521 (21%), Positives = 228/521 (43%), Gaps = 45/521 (8%)

Query: 121  NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLCRAMRGK 176
            N  + G++ E   +   +  MG+   PD++    + L+D    + ++ +  KL   M   
Sbjct: 492  NLCKEGRVMEGQRLVDSIECMGV--RPDVIS--YNTLIDGHCLAGTIDEASKLLEGMVSV 547

Query: 177  GFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
            G       Y  L++G  + G I++A+   R+++  G  P +VT N IL  L    +   A
Sbjct: 548  GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607

Query: 233  SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
              L+  ++  G K ++ T++ ++N  CK   +++A +++  +    L  ++I ++I+I  
Sbjct: 608  KELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGA 667

Query: 293  LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
            L K GR ++  +L       GL  +VV +  V++  +  G +      +  M   G  PN
Sbjct: 668  LLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPN 727

Query: 353  VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC------------- 399
                + L++ L  +G +  A     ++  R       T S LI  F              
Sbjct: 728  SQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPK 787

Query: 400  ---------------KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALR 439
                           K+ ++ D +SL+  M+ +GL PD V  + +++GL       +A  
Sbjct: 788  KYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 847

Query: 440  FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
             +   +      N++ +N +++G C+     +  K+F  +    ++ ++IT  ++I  + 
Sbjct: 848  LYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALL 907

Query: 500  SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
              G    A+ LF  +   GL PDV+TY  +   L +  ++     +F  ME++G   D  
Sbjct: 908  KGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSR 967

Query: 560  IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            + N L+  L++  ++  A     +L ++    +  T + +I
Sbjct: 968  LLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELI 1008



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 169/325 (52%), Gaps = 24/325 (7%)

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ-GRL 369
           DR L+L+ V+        +G+GD   A++ +D +L      +V++++ L+  + +  GR 
Sbjct: 10  DRCLELERVIADRARSGSLGLGD---ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRR 66

Query: 370 VEAC------GLFGQVLIR----RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
                      LF + ++R    ++ P+  TYS LI  FC+ G L  GF+ +  ++K G 
Sbjct: 67  STTSESETVVSLFNR-MVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGW 125

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           + D +V + L+NGL     +G+A+    Q +  +  +P+   +N L+ G C  KRA + +
Sbjct: 126 RMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEAL 185

Query: 474 KLFMLMG---MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +L  +M    +++  P+V++++ +I G  ++G +     LF +M+ RG+ PDV+TY+ +I
Sbjct: 186 ELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVI 245

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL K +       +F+ M  NGV P+I  YN L++  +        +++  +++  G +
Sbjct: 246 DGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPK 305

Query: 591 PDIITYNTIICGYCSLNSCLIDGYF 615
           P+  TY +++   C    C    +F
Sbjct: 306 PNCCTYGSLLNYLCKNGRCREARFF 330



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 159/332 (47%), Gaps = 15/332 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I   ++ G+ ++++++FA +   G+  +    + ++  L++  S+ ++  L  AM 
Sbjct: 661 FNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAME 720

Query: 175 GKGFCVYEFLMNGLLRK----GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      ++N L+R+    G I  A     ++ +R F     T + ++     +    
Sbjct: 721 KNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQH 780

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK-LEKAFQLYNLMMEMDLVPDLIIYSIL 289
           +A SL        PK   +      +A  K+A+ ++ A+ L+  M+   L PD++ Y+ +
Sbjct: 781 HAKSL--------PKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTI 832

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           + GLF+ GR  E  EL L+ ++   ++++  ++ +++       V  A + +  + + G 
Sbjct: 833 LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             N+I+++I+I  L + GR  +A  LF  +    L P ++TY  + +   + G L +   
Sbjct: 893 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDG 952

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLM--GDALR 439
           L+  M K G   D+ + + L+  L+  GD  R
Sbjct: 953 LFLTMEKSGTPLDSRLLNALVRRLLQRGDISR 984



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 10/209 (4%)

Query: 127  KIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQ----YYKLCRAMRGKGFCV 180
            +ID++  +F  M   G  L+PD+V    ++  L  +    +    Y  +  +        
Sbjct: 806  RIDDAYSLFREMLMKG--LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYT 863

Query: 181  YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
            Y  ++NGL +   ++ AF M + +  +G   NI+T N ++  L   G+  +A  LF  + 
Sbjct: 864  YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 923

Query: 241  LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP-DLIIYSILIDGLFKAGRL 299
              G  P+VVT+  +     +E  LE+   L+ L ME    P D  + + L+  L + G +
Sbjct: 924  ANGLVPDVVTYRLVAENLIEEGSLEEFDGLF-LTMEKSGTPLDSRLLNALVRRLLQRGDI 982

Query: 300  KEGNELLLTALDRGLKLDVVVFSSVMDAY 328
                  L    ++   L+    S ++  +
Sbjct: 983  SRAGAYLSKLDEKNFSLEASTTSELISLF 1011


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 245/517 (47%), Gaps = 19/517 (3%)

Query: 100 FFRLFRD---SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
           F R+ R+    +    C YS LI    R+G++  S   F  +   G  ++  ++ +L+  
Sbjct: 83  FNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKG 142

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQ---RG 208
           L D   VG+   +      +  C      Y  L+ G   +   E A  + R +     R 
Sbjct: 143 LCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRS 202

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN+VT   ++  LC       A  +F  ++  G KPN  T++ LI+ +    K ++  
Sbjct: 203 CPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVV 262

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           Q+   M    L PD   Y  L++ L     L E +  L   ++ GL  D  +F+    AY
Sbjct: 263 QMLEKMSARGLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAY 319

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G + +A+  +++M   G  PNV++Y  LI  LC+ GR+ +A   F Q++   + P++
Sbjct: 320 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 379

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQ 443
           + ++SL+ G C   K      L   M+ +G+ P+AV     +C+L   G + +  R    
Sbjct: 380 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 439

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
              + + P+ F +  L+ G C   R  +  K+F  M    + P  +T+  L+ G  S   
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A  LF +ML++G+TP V+TY+ I+HGLF+ K  S    ++  M  +G   DI  YN+
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +LN L K   +D A K+F  L  +GL+ +IIT+  +I
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI 596



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 224/482 (46%), Gaps = 49/482 (10%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C Y  L+  L R G ++++F     +++ G+  N +  N++LK LC   ++G A    DV
Sbjct: 99  CTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEA---MDV 155

Query: 239 LLLVGPK----PNVVTFSTLINAFCKEAKLEKAFQLYNLMME---MDLVPDLIIYSILID 291
           LL   P+    P+ V++S L+  FC E + E+A +L  +M         P+++ Y+ +ID
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL KA        +    +D G+K +   ++ ++  Y+ IG     VQ  ++M   G  P
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKP 275

Query: 352 NVISYSILIKGLC--------------------------------QQGRLVEACGLFGQV 379
           +  +Y  L+  LC                                + G + +A  +F ++
Sbjct: 276 DCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 335

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
               L P+++ Y +LID  CK G++ D    ++ MI  G+ P+ VV + L+ GL      
Sbjct: 336 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 395

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A    ++ +   + PN   FNTL+   C + R  +  +L  LM    ++PD  ++T L
Sbjct: 396 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 455

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G    G    A  +F  M+  GL+P  +TY+ ++HG      I     +F+ M R GV
Sbjct: 456 ISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 515

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGY 614
            P +  YN +L+ L +      A +L+  + + G + DI TYN I+ G C  N   +D  
Sbjct: 516 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC--VDEA 573

Query: 615 FK 616
           FK
Sbjct: 574 FK 575



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 244/520 (46%), Gaps = 40/520 (7%)

Query: 108 LGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMS-DMGIYLSPDLVQRLMSCLVDSN 161
           + + GC      YS L++ +    + +E++E+   M+ D G    P++V    + ++D  
Sbjct: 160 MPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVT--YTTVIDG- 216

Query: 162 SVGQYYKLCRAM---RGKGFC-------------VYEFLMNGLLRKGVIENAFHMHRQVI 205
                  LC+A    R +G                Y  L++G L  G  +    M  ++ 
Sbjct: 217 -------LCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMS 269

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            RG  P+  T   +L  LC    +    S  D+++  G  P+   F+   +A+ K   ++
Sbjct: 270 ARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 326

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           KA  ++N M +  L P+++ Y  LID L K GR+ +        ++ G+  ++VVF+S++
Sbjct: 327 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 386

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
                +    RA +    ML+ G  PN + ++ LI  LC  GR++E   L   +    + 
Sbjct: 387 YGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVR 446

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P   +Y+ LI G+C +G+  +   ++D M+  GL P  V  + L++G      + DA   
Sbjct: 447 PDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 506

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F + +R  + P +  +NT++ G  + KR ++  +L++ M     K D+ T+ +++ G+  
Sbjct: 507 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 566

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
              +  A  +F  +  +GL  ++IT++ +I  L KG      + +F  +  NG+ P++  
Sbjct: 567 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVT 626

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           Y ++   LI+E +L+    LF  +   G  P+    N ++
Sbjct: 627 YRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 666



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/580 (23%), Positives = 259/580 (44%), Gaps = 60/580 (10%)

Query: 38  ILANLIKTNNPTPAIQFFKW---THNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMV 91
           +L      N    A++  +     H     PN+     +I  L ++ + D A  VF +M+
Sbjct: 175 LLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMI 234

Query: 92  IQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
               K  N      D+       Y+ LI  Y+ IGK  E V++   MS  G  L PD   
Sbjct: 235 DNGVKPNN------DT-------YNCLIHGYLSIGKWKEVVQMLEKMSARG--LKPDCYT 279

Query: 152 --RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVI 205
              L++ L    ++ + +     M   G      ++    +   + G+I+ A  +  ++ 
Sbjct: 280 YGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMR 336

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           Q G  PN+V    ++  LC  G++ +A   F+ ++  G  PN+V F++L+   C   K E
Sbjct: 337 QHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWE 396

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A +L   M++  + P+ + ++ LI  L   GR+ EG  L+      G++ D   ++ ++
Sbjct: 397 RAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLI 456

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
             Y   G    A + +D M++ G  P  ++Y+ L+ G C   R+ +A  LF ++L + + 
Sbjct: 457 SGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVT 516

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
           P ++TY++++ G  ++ +  +   LY NMI  G K D                       
Sbjct: 517 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD----------------------- 553

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
                  ++ +N +++G C+     +  K+F  +    ++ ++IT T++I  +   G   
Sbjct: 554 -------IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKE 606

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ LF  +   GL P+V+TY  +   L +  ++     +F  ME+NG AP+  + N L+
Sbjct: 607 DAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 666

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             L+   ++  A     +L +R    +  T + +I  + S
Sbjct: 667 RRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTS 706



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 179/404 (44%), Gaps = 47/404 (11%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNL-------------------------------- 273
           PN  T+S LI   C+  +L+ +F  + L                                
Sbjct: 96  PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDV 155

Query: 274 ----MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL-LTALDRGLKL--DVVVFSSVMD 326
               M E+   PD + YSIL+ G     R +E  ELL + A D G     +VV +++V+D
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                    RA   + +M++ G  PN  +Y+ LI G    G+  E   +  ++  R L+P
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKP 275

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFF 441
              TY SL++  C    L +  S  D M++ GL PD  + ++  +     G++  A+  F
Sbjct: 276 DCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIF 332

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +  +  L PN+  +  L+D  C+L R  D    F  M    + P+++    L+ G+ + 
Sbjct: 333 NKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTV 392

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
                A  L ++ML +G+ P+ + ++ +I  L     +  G  +  LME  GV PD   Y
Sbjct: 393 DKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSY 452

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             L++        D A K+F  +   GL P  +TYNT++ GYCS
Sbjct: 453 TPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 496



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 195/414 (47%), Gaps = 28/414 (6%)

Query: 218 KILKRLCINGQIG--NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK--------- 266
           +I+     +G +G  +A  LFD LL+     +VV F+ ++NA  + ++            
Sbjct: 17  RIIAARARSGSLGLDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSES 76

Query: 267 --AFQLYNLMME---MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
                L+N M+    + + P+   YSILI  L + GRLK         L  G +++ +V 
Sbjct: 77  ELVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVI 136

Query: 322 SSVMDAYVGIGDVGRAVQT-YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           + ++        VG A+     RM   G  P+ +SYSIL+KG C + R  EA  L   + 
Sbjct: 137 NQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMA 196

Query: 381 I---RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-- 435
               R   P+++TY+++IDG CK+        ++  MI  G+KP+    + LI+G +   
Sbjct: 197 NDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIG 256

Query: 436 ---DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
              + ++   +     L P+ + + +L++  C L      + L +  G+    PD     
Sbjct: 257 KWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGL---SPDHHIFN 313

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           +     A  G +  A+ +F +M + GL+P+V+ Y A+I  L K   +      F  M   
Sbjct: 314 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 373

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           GV P+I ++N L+  L      + A +L  ++ D+G+ P+ + +NT+IC  C++
Sbjct: 374 GVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNV 427



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 159/361 (44%), Gaps = 72/361 (19%)

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ- 366
           T  DR L+L+ ++ +      +G+ D   A++ +D +L      +V++++ ++  + +  
Sbjct: 7   TVRDRCLELERIIAARARSGSLGLDD---ALKLFDELLIHARPASVVAFNQILNAVSRAS 63

Query: 367 --------------------GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
                                R+V  C +       ++ P+  TYS LI   C+ G+L+ 
Sbjct: 64  RASGRRSSSTSESELVVSLFNRMVRECSI-------KVAPNTCTYSILIGCLCRMGRLKH 116

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV-RMTLIPNLFIFNTLM 460
            F+ +  ++K G + + +V + L+ GL     +G+A+    Q +  +   P+   ++ L+
Sbjct: 117 SFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILL 176

Query: 461 DGCCRLKRATDTVKLFMLMGM---YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            G C   RA + ++L  +M      +  P+V+T+T +I G+        A  +F QM+  
Sbjct: 177 KGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDN 236

Query: 518 GLTPDVITYSAIIHGLFK-GKNISV------------------------------GLHMF 546
           G+ P+  TY+ +IHG    GK   V                               +H F
Sbjct: 237 GVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSF 296

Query: 547 -KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             LM  NG++PD  I+N+  +   K   +D A+ +F ++   GL P+++ Y  +I   C 
Sbjct: 297 LDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCK 356

Query: 606 L 606
           L
Sbjct: 357 L 357



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/408 (20%), Positives = 174/408 (42%), Gaps = 56/408 (13%)

Query: 79  MRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM 138
           M D A  +F+KM  Q G + N              +Y  LI+   ++G++D++   F  M
Sbjct: 324 MIDKAMDIFNKMR-QHGLSPNVV------------NYGALIDALCKLGRVDDAEVKFNQM 370

Query: 139 SDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL----RKG 192
            + G+  +P++V    L+  L   +   +  +L   M  +G C      N L+      G
Sbjct: 371 INEGV--TPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 428

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            +     +   +   G  P+  +   ++   C+ G+   A  +FD ++ +G  P  VT++
Sbjct: 429 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYN 488

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD- 311
           TL++ +C  ++++ A+ L+  M+   + P ++ Y+ ++ GLF+  R  E  EL L  ++ 
Sbjct: 489 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 548

Query: 312 ----------------------------------RGLKLDVVVFSSVMDAYVGIGDVGRA 337
                                             +GL+L+++ F+ ++ A +  G    A
Sbjct: 549 GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDA 608

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +  +  +   G +PNV++Y ++ + L ++G L E   LF  +      P+    ++L+  
Sbjct: 609 MDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 668

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
               G +    +    + +R    +A   SLLI+    D  +   +S+
Sbjct: 669 LLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSL 716


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 236/490 (48%), Gaps = 11/490 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE--- 182
           G+I +++E+   MS  G    P +   ++     S       ++  AM  KG C  +   
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-CTLDTGN 183

Query: 183 --FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
              ++N +  +G ++ A  + R++   G   +IV+ N +LK LC+  + G+   L D ++
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV 243

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            V   PN+VTF+TLI   C+    E+  ++   M E    PD+ +Y+ +IDG+ K G L+
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
             NE+L      GLK +VV +++V+           A +    M       + ++++IL+
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILV 363

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              CQ G +     L  Q+L     P ++TY+++I+GFCK G + +   L  +M   G K
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  ++++ GL       DA     Q ++    PN   FNTL++  C+       ++L
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M +    PD+I+++ +I G+   G    A+ L   M+ +G++P+ I YS+I   L +
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              ++  + MF  ++   +  D  +YN +++ L K    D A+  F  +   G  P+  T
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 596 YNTIICGYCS 605
           Y  +I G  S
Sbjct: 604 YTMLIKGLAS 613



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 179/397 (45%), Gaps = 5/397 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN  T   +++ LC  G+I +A  + D +   G  P    +  ++ A C+      + ++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M       D    +++++ + + G + E   LL      G + D+V +++V+     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
               G   +  D M+     PN+++++ LI  LC+ G       +  Q+      P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSV 445
           Y+++IDG CK G L     + + M   GLKP+ V  + ++ GL       +A     +  
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +     +   FN L+D  C+       ++L   M  +   PDVIT+T +I G   +G + 
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A++L   M   G  P+ ++Y+ ++ GL           +   M + G  P+   +N L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           N L K+  ++ A++L  Q+   G  PD+I+Y+T+I G
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 125/239 (52%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG  ++G+I+ A  + + +   G  PN V+   +LK LC  G+  +A  L   +
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PN VTF+TLIN  CK+  +E+A +L   M+     PDLI YS +IDGL KAG+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E  ELL   +++G+  + +++SS+  A    G V + +Q +D + +     + + Y+ +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           I  LC++     A   F  ++     P+  TY+ LI G    G  ++   L   +  RG
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 3/149 (2%)

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G CR   A        L     + P+  T   ++RG+ ++G ++ A+ +  +M 
Sbjct: 82  YNAMVAGYCR---AGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            +G  P    Y  I+    +       + + + M   G   D    N++LN + ++  +D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            A+ L  +L   G E DI++YN ++ G C
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLC 227



 Score = 46.6 bits (109), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 1/153 (0%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN + F  ++ G C   R  D +++   M      P    + V++      G   +++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
              M  +G T D    + +++ + +   +   + + + +   G   DI  YN +L  L  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
                   +L  ++      P+I+T+NT+I GY
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLI-GY 260


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 245/461 (53%), Gaps = 12/461 (2%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG--KG-FCVYEFL 184
           I ++V++F  M++ G++        L++ L  +   G   KL   M+G  KG    Y  +
Sbjct: 93  IPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMI 152

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++ L + G+   A  M  ++I  G +P++V  + ++  LC  G++  A   F  +   G 
Sbjct: 153 IDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGI 212

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
             +V T+++LI+   +    ++     NLM++    PD   ++ILIDGL K G++ E  +
Sbjct: 213 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 272

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +L     +G + D++ ++++M+    +G +  A + ++ + + G   NV SY+ILI G C
Sbjct: 273 ILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 332

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG--LKPD 422
           +  ++ EA  LF ++  + L+PS +TY++LI   C+SG++R    L+  M   G  LK  
Sbjct: 333 KDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL- 391

Query: 423 AVVCSLL----INGLMGDALRFFFQSVRMTL-IPNLFIFNTLMDGCCRLKRATDTVKLFM 477
           +  C LL     NG + +A+  F QS++ T   PN+ +F+ L+DG CR  +  +  K F 
Sbjct: 392 STYCVLLDGLCKNGHLEEAIDLF-QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 450

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            +    ++PD I + +LI G+ ++G LS A+ L +QM ++G  PD IT++ II  L K  
Sbjct: 451 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 510

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
            I   + + + M     +PD A+ ++LL +   +    AAL
Sbjct: 511 EIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAAL 551



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 229/467 (49%), Gaps = 12/467 (2%)

Query: 146 SPD--LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFH 199
            PD   V  L+  +   N +    +L   M  KG       Y  L+NGL +      A  
Sbjct: 74  EPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIK 133

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +H + ++     ++ T   I+  LC +G    A  +F  ++  G  P+VV +S+L++  C
Sbjct: 134 LHEK-MKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 192

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           +  +L++A + +  M    +  D+  Y+ LI GL +AG  KE    L   +DRG   D  
Sbjct: 193 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 252

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            F+ ++D     G VG A Q  + M + G  P++++Y+ L+ GLC  G+L +A  LF  +
Sbjct: 253 TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 312

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLM 434
             R ++ ++ +Y+ LI+G+CK  K+ + F L++ M  +GLKP  V  + LI     +G +
Sbjct: 313 ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRV 372

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A + F +         L  +  L+DG C+     + + LF  +     KP++   ++L
Sbjct: 373 RTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSIL 432

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           + G+   G L  A   F ++ K GL PD I Y+ +I+GL     +S  + +   ME  G 
Sbjct: 433 LDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGC 492

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            PD   +NV++  L+KE  +  A++L  ++ +R   PD    + ++C
Sbjct: 493 LPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLC 539



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 208/406 (51%), Gaps = 6/406 (1%)

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           ++RGF P+ VT   ++K + +   I +A  LFD +   G   +  T+  LIN  CK  K 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
             A +L+   M+ +   D+  Y ++ID L K G   E  ++    +  G+  DVVV+SS+
Sbjct: 129 GLAIKLHE-KMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           MD     G +  A++ +  M   G   +V +Y+ LI GL + G   E       ++ R  
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
            P   T++ LIDG CK GK+ +   + + M  +G +PD +  + L+NGL     + DA +
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F       +  N+F +N L++G C+ ++  +  +LF  M    +KP  +T+  LI  + 
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G + +A  LF +M   G    + TY  ++ GL K  ++   + +F+ +++    P+I 
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           ++++LL+ + +   L+ A K F +++  GLEPD I YN +I G C+
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCN 473



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 208/416 (50%), Gaps = 13/416 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y  +I++  + G   E++++F+ M   GI   PD+V    LM  L     + +  +  + 
Sbjct: 149 YGMIIDSLCKDGMTTEALDMFSEMIGAGIL--PDVVVYSSLMDGLCRFGRLKEALEFFKE 206

Query: 173 MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G+G       Y  L++GL R G+ +        ++ RGF P+  T   ++  LC  G+
Sbjct: 207 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 266

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +G A  + +++   G +P+++T++TL+N  C   +LE A +L+  + +  +  ++  Y+I
Sbjct: 267 VGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 326

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+G  K  ++ E   L      +GLK   V +++++ A    G V  A + +  M   G
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
               + +Y +L+ GLC+ G L EA  LF  +     +P++  +S L+DG C++GKL + +
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 446

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
             +D + K GL+PD +  ++LINGL     + +A++  +Q      +P+   FN ++   
Sbjct: 447 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 506

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
            +     + ++L   M   N  PD    ++L+   +      +A++     L++G+
Sbjct: 507 LKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 562


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 262/554 (47%), Gaps = 29/554 (5%)

Query: 64  SPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE 120
           +PN+     +I  L ++ M D A  VF  M+ +  +  N               Y+ LI 
Sbjct: 199 TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNH-------------TYTCLIH 245

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
            Y+ IGK  E V++   MS  G  L PD  +   L+  L  +    +   +  ++  KG 
Sbjct: 246 GYLSIGKWKEVVQMLQEMSTHG--LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGI 303

Query: 179 ----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                +Y  L++G   +G +         ++  G  P+    N +         I  A  
Sbjct: 304 KPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMH 363

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +FD +      PN+VT+  LI+A CK  +++ A   +N M++  + PD+ ++S L+ GL 
Sbjct: 364 IFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLC 423

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
              + ++  EL    LD+G++LD V F+++M      G V  A +  D ML  G  P+VI
Sbjct: 424 TVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVI 483

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           SY+ L+ G C  GR+ EA  L   ++   L+P  +TY++L+ G+CK+ ++ D +SL+  M
Sbjct: 484 SYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREM 543

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + +GL PD V  + +++GL       +A   +   +      N++ +N +++G C+    
Sbjct: 544 LMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFV 603

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  K+F  +   +++ D+ T  ++I  +   G    A+ LF  +   GL PDV TY  I
Sbjct: 604 DEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLI 663

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
              L K  ++     +F  ME NG AP+  + N L+  L+   +++ A     +L ++  
Sbjct: 664 AENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNF 723

Query: 590 EPDIITYNTIICGY 603
             +  T + +I  Y
Sbjct: 724 SLEASTTSMLISIY 737



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 244/517 (47%), Gaps = 18/517 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-QRLMSCLVDSNSVGQYYK-LCRA 172
           Y+ LI  + R+G++      F  +   G  ++  ++  +L+  L D+  V +    L R 
Sbjct: 95  YTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRR 154

Query: 173 MRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRG---FVPNIVTCNKILKRLC 224
           M   G C      Y  L+ G   +   E A  +   +   G     PN+VT   ++  LC
Sbjct: 155 MPEFG-CTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLC 213

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
               +  A  +F  ++  G +PN  T++ LI+ +    K ++  Q+   M    L PD  
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCY 273

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           IY++L+D L K GR  E   +  + + +G+K +V ++  ++  Y   G +       D M
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLM 333

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +  G  P+   ++I+     ++  + EA  +F ++  +RL P+++TY +LID  CK G++
Sbjct: 334 VGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRV 393

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
            D    ++ MI  G+ PD  V S L+ GL        A   FF+ +   +  +   FNTL
Sbjct: 394 DDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTL 453

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           M   CR  R  +  +L  LM    ++PDVI++  L+ G    G +  A  L   ++  GL
Sbjct: 454 MCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGL 513

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PD +TY+ ++HG  K + I     +F+ M   G+ PD+  YN +L+ L +      A +
Sbjct: 514 KPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 573

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
           L+  + +   + +I TYN II G C  N   +D  FK
Sbjct: 574 LYLSMINSRTQMNIYTYNIIINGLCKNN--FVDEAFK 608



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 201/404 (49%), Gaps = 26/404 (6%)

Query: 226 NGQIG--NASSLFDVLLLVGPKPNVVTFSTLINAF----CKEAKLEKAFQLYNLMME--- 276
           +G +G  +A  LFD +L      +V  F+ L+ A     C  A  E    L+N M+    
Sbjct: 27  SGSLGLNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSAS-ELVVSLFNRMIRECS 85

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL-DVVVFSSVMDAYVGIGDVG 335
           + + P    Y+ILI    + GRLK G       L  G ++ D V+FS ++    G+ D  
Sbjct: 86  IKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLK---GLCDAK 142

Query: 336 RAVQTYD----RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR---RLEPSL 388
           R  +  D    RM   G  P+V SYSIL+KG C + R  EA  L   +         P++
Sbjct: 143 RVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNV 202

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQ 443
           +TY+++IDG CK+  +     ++ +MI +G++P+    + LI+G +      + ++   +
Sbjct: 203 VTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQE 262

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                L P+ +I+  L+D  C+  R T+   +F  +    IKP+V  + +L+ G A++GS
Sbjct: 263 MSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGS 322

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           LS        M+  G++PD   ++ +     K   I   +H+F  M +  ++P+I  Y  
Sbjct: 323 LSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGA 382

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++ L K   +D A+  F Q+ D G+ PDI  +++++ G C+++
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVD 426



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 156/319 (48%), Gaps = 23/319 (7%)

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
            A DR L+L+ V+        +G+ D   A++ +D ML      +V +++ L+  +  + 
Sbjct: 9   AAADRCLELERVIADRAHSGSLGLND---ALKLFDEMLTHARPASVRAFNQLLTAV-SRA 64

Query: 368 RLVEACGLFGQVLIR-------RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
           R   A  L   +  R       ++ PS  TY+ LI  FC+ G+L+ GF+ +  ++K G +
Sbjct: 65  RCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWR 124

Query: 421 -PDAVVCSLLINGLMGDALR-------FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
             D V+ S L+ GL  DA R          +       P++F ++ L+ G C  KRA + 
Sbjct: 125 VNDTVIFSQLLKGLC-DAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEA 183

Query: 473 VKLFMLM---GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           ++L  +M   G  +  P+V+T+T +I G+     +  A  +F  M+ +G+ P+  TY+ +
Sbjct: 184 LELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCL 243

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           IHG          + M + M  +G+ PD  IY VLL+ L K      A  +F  +  +G+
Sbjct: 244 IHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGI 303

Query: 590 EPDIITYNTIICGYCSLNS 608
           +P++  Y  ++ GY +  S
Sbjct: 304 KPNVTIYGILLHGYATEGS 322


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 233/494 (47%), Gaps = 34/494 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L++   R  ++  +V +   MS  G+         LM   V+  S+    ++   M 
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G    +     L+NG  + G +E+A    +Q I  GF P+ +T N  +  LC N  +G
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  + DV++  G  P+V T++ ++N  CK  +LE+A  + N M++   +PD+  ++ LI
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L    RL+E  +L      +G+  DV  F+ +++A   +GD   A++ ++ M N G  
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y+ LI  LC  G+L +A  L   +       S +TY+++IDG CK  ++ +   +
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 483

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +D M  +G+  +A+                               FNTL+DG C+ K+  
Sbjct: 484 FDQMDLQGISRNAIT------------------------------FNTLIDGLCKDKKID 513

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D   L   M    ++P+ IT+  ++     QG +  A  +   M   G   DV+TY  +I
Sbjct: 514 DAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLI 573

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +GL K     V L + + M   G+ P    YN +L  L +  N+  AL LF ++ + G  
Sbjct: 574 NGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633

Query: 591 PDIITYNTIICGYC 604
           PD +TY  +  G C
Sbjct: 634 PDALTYKIVFRGLC 647



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 216/431 (50%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  L+N L+    ++    ++ ++  RG  P++VT N ++K LC   Q+  A  + + +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+  TF+TL+  F +E  +E A ++   M+EM      +  ++LI+G  K GR+
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++    +   +  G + D + +++ ++       VG A++  D M+  G  P+V +Y+I+
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 327

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  LC+ G+L EA G+  Q++ R   P + T+++LI   C   +L +   L   +  +G+
Sbjct: 328 VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    ++LIN L  +GD   ALR F +       P+   +NTL+D  C L +    + 
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M         IT+  +I G+  +  +  A  +F QM  +G++ + IT++ +I GL 
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K I     +   M   G+ P+   YN +L    K+ ++  A  +   +T  G E D++
Sbjct: 508 KDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 595 TYNTIICGYCS 605
           TY T+I G C 
Sbjct: 568 TYGTLINGLCK 578



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 193/403 (47%), Gaps = 5/403 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   + V  N +L  L    ++    S++  +   G KP+VVTF+TL+ A C+  ++  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             +   M    + PD   ++ L+ G  + G ++    +    L+ G     V  + +++ 
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y  +G V  A+    + +  GF P+ I+Y+  + GLCQ   +  A  +   ++    +P 
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           + TY+ +++  CK+G+L +   + + M+ RG  PD    + LI  L     + +AL    
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           Q     + P+++ FN L++  C++      ++LF  M      PD +T+  LI  + S G
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A+ L   M   G     ITY+ II GL K   I     +F  M+  G++ +   +N
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 500

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            L++ L K+  +D A  L  Q+   GL+P+ ITYN+I+  YC 
Sbjct: 501 TLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCK 543



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 184/370 (49%), Gaps = 5/370 (1%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L G + + V ++ L+N   + +K++    +Y+ M    + PD++ ++ L+  L +A +++
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               +L     RG+  D   F+++M  +V  G +  A++   RML  G     ++ ++LI
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ GR+ +A G   Q +    EP  +TY++ ++G C++  +     + D M++ G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 421 PDA-----VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD      VV  L  NG + +A     Q V    +P++  FNTL+   C   R  + + L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              + +  + PDV T  +LI  +   G    A+ LF +M   G TPD +TY+ +I  L  
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +   L + K ME  G       YN +++ L K+  ++ A ++F Q+  +G+  + IT
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 596 YNTIICGYCS 605
           +NT+I G C 
Sbjct: 499 FNTLIDGLCK 508



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 3/152 (1%)

Query: 471 DTVKLFM--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
           D V L +  L  ++ I+ D + +  L+  +     +     ++ +M  RG+ PDV+T++ 
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++  L +   +   + M + M   GVAPD   +  L+   ++E +++AAL++  ++ + G
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 589 LEPDIITYNTIICGYCSLNSCLID-GYFKSQI 619
                +T N +I GYC L       GY + +I
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 242/493 (49%), Gaps = 36/493 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+ + + G ++++ ++F  M   GI  SPDL                         
Sbjct: 219 YNTVIDGFFKEGDVNKACDLFNEMVQRGI--SPDL------------------------- 251

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++N L +   ++ A  + RQ++ +G +P+  T N ++      GQ   A  
Sbjct: 252 ----STYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVR 307

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +   G  P+VVT ++L+ + CK  K++ A  +++ M       D+  Y I+++G  
Sbjct: 308 VSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYA 367

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             G L +  EL    L  G+  D  +F+ ++ AY   G + RA   ++ M   G  P+V+
Sbjct: 368 TKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVV 427

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +YS +I  LC+ G++ +A   F Q++ + + PS+ TY  LI GFC  G L     L   M
Sbjct: 428 TYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQM 487

Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + +G++PD    + +IN     G + DA   F  ++ + L PN+ ++NTLMDG C + + 
Sbjct: 488 MNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKM 547

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            + +++F +M    I+P+V+ +  L+ G    G +   + LF ++L +G+ P    Y+ I
Sbjct: 548 ENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNII 607

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           +HGLF+          F  M  +G+A D   Y+++L  L K    D A+ LF +L    +
Sbjct: 608 LHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNV 667

Query: 590 EPDIITYNTIICG 602
           + DI T N +I G
Sbjct: 668 KIDITTLNIMIAG 680



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 241/482 (50%), Gaps = 38/482 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  Y   G+  E+V +   M+  GI   PD+V    LM+ L     +     +  +
Sbjct: 289 YNSLIYGYSSTGQWKEAVRVSKKMTSQGIL--PDVVTLNSLMASLCKHGKIKDARDVFDS 346

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y+ ++NG   KG + +   +   ++  G  P+    N ++K     G 
Sbjct: 347 MAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGM 406

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A+ +F+ +   G +P+VVT+ST+I A C+  K++ A + +N M++  + P +  Y  
Sbjct: 407 LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHF 466

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G    G L +  +L+L  +++G++ D+  F+ +++    +G V  A   +D  ++ G
Sbjct: 467 LIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIG 526

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV+ Y+ L+ G C  G++  A  +F  ++   ++P+++ Y +L++G+CK G++ +G 
Sbjct: 527 LHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGL 586

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           SL+  ++ +G+KP   + +++++GL        FQ+ R   +P    F+ + +       
Sbjct: 587 SLFREILHKGIKPSTTLYNIILHGL--------FQAGRT--VPAKVKFHEMTES------ 630

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                          I  D  T+++++ G+        AILLF ++    +  D+ T + 
Sbjct: 631 --------------GIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I G+F+ + +     +F  + R+G+ P +  Y++++  LIKE  ++ A  +F  + + G
Sbjct: 677 MIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAG 736

Query: 589 LE 590
            E
Sbjct: 737 CE 738



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 212/439 (48%), Gaps = 20/439 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  LM+   R    +       QV++ G   + +  + +L+ LC   +   A    D+L
Sbjct: 110 TYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEA---LDIL 166

Query: 240 LLVGPK----PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV--PDLIIYSILIDGL 293
           L   P     P+V ++  ++ + C + K  +A +L  +M E   V  P+ + Y+ +IDG 
Sbjct: 167 LHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGF 226

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
           FK G + +  +L    + RG+  D+  ++ V++A      + +A     +M++ G LP+ 
Sbjct: 227 FKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDN 286

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            +Y+ LI G    G+  EA  +  ++  + + P ++T +SL+   CK GK++D   ++D+
Sbjct: 287 WTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDS 346

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG---CCR 465
           M  +G K D     +++NG      + D    F   +   + P+  IFN L+     C  
Sbjct: 347 MAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGM 406

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           L RAT    +F  M    ++PDV+T++ +I  +   G +  A+  F QM+ +G+ P + T
Sbjct: 407 LDRAT---IIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIST 463

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y  +I G     ++     +   M   G+ PDI  +N ++N L K   +  A  +F    
Sbjct: 464 YHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTI 523

Query: 586 DRGLEPDIITYNTIICGYC 604
             GL P+++ YNT++ GYC
Sbjct: 524 SIGLHPNVMVYNTLMDGYC 542



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 172/344 (50%), Gaps = 24/344 (6%)

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           L P L  Y IL+D   +A R K         L  GL +D ++ S+++    G+ +  R  
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLR---GLCEAKRTA 160

Query: 339 QTYD----RMLNGGFLPNVISYSILIKGLC------QQGRLVEACGLFGQVLIRRLEPSL 388
           +  D    RM + G +P+V SY I++K LC      Q   L+      G V +    P+ 
Sbjct: 161 EALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCL----PNA 216

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           + Y+++IDGF K G +     L++ M++RG+ PD    + ++N L     M  A     Q
Sbjct: 217 VAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQ 276

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            V   ++P+ + +N+L+ G     +  + V++   M    I PDV+T   L+  +   G 
Sbjct: 277 MVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK 336

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL-HMFKLMERNGVAPDIAIYN 562
           +  A  +F  M  +G   D+ +Y  +++G +  K   V L  +F LM  +G+APD  I+N
Sbjct: 337 IKDARDVFDSMAMKGQKTDIFSYKIMLNG-YATKGCLVDLTELFNLMLSDGIAPDSHIFN 395

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           VL+    K   LD A  +F ++ ++G+EPD++TY+T+I   C +
Sbjct: 396 VLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRI 439



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 11/271 (4%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS- 409
           P + +Y IL+    +  R       FGQVL   L    +  S+L+ G C++ +  +    
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165

Query: 410 LYDNMIKRGLKPDAV--------VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
           L   M   G  PD          +CS   +G   + LR   +   + L PN   +NT++D
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCL-PNAVAYNTVID 224

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G  +         LF  M    I PD+ T+  ++  +    ++  A  +  QM+ +G+ P
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLP 284

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D  TY+++I+G          + + K M   G+ PD+   N L+  L K   +  A  +F
Sbjct: 285 DNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVF 344

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
             +  +G + DI +Y  ++ GY +   CL+D
Sbjct: 345 DSMAMKGQKTDIFSYKIMLNGYAT-KGCLVD 374



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 126/253 (49%), Gaps = 13/253 (5%)

Query: 364 CQQGRLVEACGLFGQVL----IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           C+ G  + A  LF +V      R L P+L TY  L+D   ++ + +   + +  ++K GL
Sbjct: 81  CRDGPAL-AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGL 139

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             D ++ S L+ GL       +AL      +  +  +P++F +  ++   C  +++    
Sbjct: 140 GIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQAD 199

Query: 474 KLFMLM--GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
           +L  +M  G     P+ + +  +I G   +G ++ A  LF +M++RG++PD+ TY+ +++
Sbjct: 200 ELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVN 259

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            L K + +     + + M   GV PD   YN L+           A+++  ++T +G+ P
Sbjct: 260 ALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILP 319

Query: 592 DIITYNTIICGYC 604
           D++T N+++   C
Sbjct: 320 DVVTLNSLMASLC 332


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 239/459 (52%), Gaps = 26/459 (5%)

Query: 162 SVGQYYKLCRAMRGK---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           +V +Y ++ RA  GK       Y  L+    R G ++  F     V+++GF  + +T   
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 219 ILKRLCINGQIGNASSLFDVLLL----VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           +LK LC + +  +A    D++L     +G  P+V +++ L+   C E + ++A +L ++M
Sbjct: 133 LLKGLCADKRTSDA---MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM 189

Query: 275 ME---MDLVPDLIIYSILIDGLFKAG--------RLKEGNELLLTALDRGLKLDVVVFSS 323
            +       PD++ Y+ +++G FK G         + +  E+L T +  G+  D + ++S
Sbjct: 190 ADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNS 249

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++  Y   G    A+ T  +M + G  PNV++YS L+  LC+ GR  EA  +F  +  R 
Sbjct: 250 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 309

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           LEP + TY +L+ G CK G++ +   L+D M++ G+KPD +  + LI+G      M +A 
Sbjct: 310 LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 369

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           +     V + + P++  + TL++G CR+ R  D + LF  M    + P++IT+ ++++G+
Sbjct: 370 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 429

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                 ++A  L+  + K G   ++ TY+ I+HGL K       L MF+ +    +  + 
Sbjct: 430 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 489

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
             +N+++  L+K   +D A  LF   +  GL PD+ TY+
Sbjct: 490 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 528



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 254/557 (45%), Gaps = 79/557 (14%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFG-CDYSFLIENYVRI-----GKIDESVEIFA 136
           A HVFD++ ++ G+  + + L R +L D      +  +  Y R+     GK+  +V  +A
Sbjct: 39  ARHVFDEL-LRRGRGASIYGLNR-ALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKG 192
                           L+ C   +  +   +     +  KGF V    +  L+ GL    
Sbjct: 97  I---------------LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADK 141

Query: 193 VIENAFHM-HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV---GPKPNV 248
              +A  +  R++ + G +P++ + N +LK LC   +   A  L  ++      G  P+V
Sbjct: 142 RTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDV 201

Query: 249 VTFSTLINAFCKEA--------KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           V+++T++N F KE          ++KA ++ N M++  ++PD + Y+ ++ G   +G+ K
Sbjct: 202 VSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 261

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E    L      G++ +VV +SS+M+     G    A + +D M   G  P++ +Y  L+
Sbjct: 262 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLL 321

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
           +G C++GR++E+  LF  ++   ++P ++TY++LIDG C +GK+ +   L  +M+  G+K
Sbjct: 322 QGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK 381

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V    LING      M DAL  F + V   + PN+  +N ++ G    +R     +L
Sbjct: 382 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 441

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQ---------------------------------- 501
           ++ +     + ++ T+ +++ G+                                     
Sbjct: 442 YVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 501

Query: 502 -GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G +  A  LF      GL PDV TYS +   L +  ++     +F  ME NG + D  +
Sbjct: 502 CGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRM 561

Query: 561 YNVLLNMLIKECNLDAA 577
            N ++  L++  ++  A
Sbjct: 562 LNSIVRKLLQRGDITRA 578



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 213/442 (48%), Gaps = 25/442 (5%)

Query: 134 IFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM---RGKG----FCVYEFL 184
           +   M+++G    PD+     L+  L D N   +  +L   M   RG G       Y  +
Sbjct: 150 VLRRMTELGCI--PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 185 MNGLLRKGV--------IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           +NG  ++G+        ++ A  +   +++ G +P+ +T N IL   C +GQ   A    
Sbjct: 208 LNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             +   G +PNVVT+S+L+N  CK  +  +A ++++ M +  L PD+  Y  L+ G  K 
Sbjct: 268 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKE 327

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GR+ E  +L    +  G+K D++ +++++D     G +  A +    M++ G  P++++Y
Sbjct: 328 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 387

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
             LI G C+  R+ +A  LF +++   + P+++TY+ ++ G   + +      LY ++ K
Sbjct: 388 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 447

Query: 417 RGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G + +    +++++G     L  +ALR F       L      FN ++    +  R  +
Sbjct: 448 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDE 507

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              LF       + PDV T++++   +  QGSL     LF  M + G + D    ++I+ 
Sbjct: 508 AKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR 567

Query: 532 GLFKGKNIS-VGLHMFKLMERN 552
            L +  +I+  G ++F + E++
Sbjct: 568 KLLQRGDITRAGTYLFMIDEKH 589



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 146/345 (42%), Gaps = 30/345 (8%)

Query: 11  VWRSINKCYCS--ESKTHISDLQFNQANAILANLI----------KTNNPTPAIQFFKWT 58
            + SI   YCS  + K  I  L+  +++ +  N++          K    T A + F   
Sbjct: 246 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 305

Query: 59  HNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFL 118
                 P+IA     LLQ        H  +  VI+  K ++   + R  +      Y+ L
Sbjct: 306 TKRGLEPDIATY-RTLLQG-------HCKEGRVIESEKLFDL--MVRIGVKPDIITYNTL 355

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGK 176
           I+     GK+DE+ ++ A M  +G+   PD+V    L++     + +     L + M   
Sbjct: 356 IDGCCLAGKMDEATKLLASMVSVGV--KPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 413

Query: 177 GFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G       Y  ++ GL        A  ++  + + G    + T N IL  LC N     A
Sbjct: 414 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 473

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             +F  L L   +    TF+ +I A  K  ++++A  L+       LVPD+  YS++ + 
Sbjct: 474 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 533

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           L + G L+E ++L L+  + G   D  + +S++   +  GD+ RA
Sbjct: 534 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 251/518 (48%), Gaps = 19/518 (3%)

Query: 102 RLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
           R+  D  G + C+     Y+ +++  V       +  +F  M   G+  +      +M  
Sbjct: 158 RMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKA 217

Query: 157 LVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           L   N V     L R M   G      VY+ L++ L ++  +  A  +  ++   G +P+
Sbjct: 218 LCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPD 277

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           + T N ++  LC   +I   + L D +L  G  PN +T+  L+N  C+  K+++A  L N
Sbjct: 278 VDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLN 337

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGI 331
            +      P+ + ++ILI+G  K+GRL E N  L   +   G + DV  F++++      
Sbjct: 338 KVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKK 393

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G +G AV   + M   G  PN+I+Y+ L+ G C++ +L EA  +  ++  +  E +++ Y
Sbjct: 394 GLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGY 453

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
           + L+   CK+GK+     +   M  +G KPD    + LI GL       DAL  +   + 
Sbjct: 454 NVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLL 513

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             +I N   +NTL+    R     + +KL   M       D IT+  LI+     G+   
Sbjct: 514 DGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEK 573

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A+ LF +M+++ L P  I+ + +I+GL +   +   L + + M   G+APD+  YN L+N
Sbjct: 574 ALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLIN 633

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L K  N+  A  LF +L   G++PD ITYNT+IC +C
Sbjct: 634 GLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHC 671



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 273/573 (47%), Gaps = 28/573 (4%)

Query: 49  TPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSL 108
           + ++  F+W  +     +   + HVL+          V DK+++Q  +       FR+SL
Sbjct: 83  STSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEG---IAFRESL 139

Query: 109 GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR---LMSCLVDSNSVGQ 165
             F C    +++ Y R     ++  +   M   G+Y      +    ++  LV +N    
Sbjct: 140 --FIC----IMKYYGRANLPGQATRMLLDMK--GVYCCEPTFKSYNVVLDILVSANCPSV 191

Query: 166 YYKLCRAMRGKGF--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
              +   M  KG    VY F  +M  L     ++NA  + R + + G VPN V    ++ 
Sbjct: 192 AANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIH 251

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            L    ++  A  L + + L+G  P+V TF+ +I   C+  ++ +  +L + M+     P
Sbjct: 252 ALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTP 311

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-T 340
           + I Y +L++GL + G++ E   LL    ++    + V F+ +++ YV  G +  A    
Sbjct: 312 NDITYGVLMNGLCRVGKVDEAQVLL----NKVPTPNDVHFTILINGYVKSGRLDEANAFL 367

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           YD+M+  G  P+V +++ LI GLC++G +  A  +   +      P+L+TY++L+DGFCK
Sbjct: 368 YDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCK 427

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFI 455
             +L +   + + M  +G + + +  ++L+     NG +  AL    +       P++F 
Sbjct: 428 KNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFT 487

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           FNTL+ G C++ R  D + L+  M +  +  + +T+  LI      G++  A+ L   ML
Sbjct: 488 FNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDML 547

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            RG   D ITY+ +I    K       L +F  M R  + P     N+L+N L +   + 
Sbjct: 548 FRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVC 607

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            AL+L   +  RGL PD++TYN++I G C + +
Sbjct: 608 NALELLRDMIHRGLAPDVVTYNSLINGLCKMGN 640



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 242/531 (45%), Gaps = 67/531 (12%)

Query: 70  LIHVLLQSDMRDVASHVFDKM--------VIQFG----------KTYNFFRLFRDSLGDF 111
           ++ +L+ ++   VA++VF +M        V  FG          +  N   L RD +   
Sbjct: 179 VLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRD-MTKH 237

Query: 112 GCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           GC      Y  LI    +  +++E++++   M  MG     D    ++  L   N + + 
Sbjct: 238 GCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEG 297

Query: 167 YKLCRAMRGKGFC----VYEFLMNGLLRKGVIE--------------------------- 195
            KL   M  +GF      Y  LMNGL R G ++                           
Sbjct: 298 AKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKS 357

Query: 196 ------NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
                 NAF ++ ++I+ G  P++ T N ++  LC  G +G+A  + + +   G  PN++
Sbjct: 358 GRLDEANAF-LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLI 416

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           T++TL++ FCK+ +LE+A  + N M       +++ Y++L+  L K G++ +  ++L   
Sbjct: 417 TYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEM 476

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
            D+G K D+  F++++     +     A+  Y  ML  G + N ++Y+ LI    + G +
Sbjct: 477 SDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAI 536

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  L   +L R      +TY+ LI  FCK G       L+D M+++ L P  + C+LL
Sbjct: 537 QEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLL 596

Query: 430 INGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           INGL     + +AL      +   L P++  +N+L++G C++    +   LF  +    I
Sbjct: 597 INGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGI 656

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           +PD IT+  LI      G    A LL  + ++    P+ +T+  ++    K
Sbjct: 657 QPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIK 707



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 168/343 (48%), Gaps = 13/343 (3%)

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           +Y +LID L  A   K  ++LLL   + G+     +F  +M  Y      G+A +    M
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163

Query: 345 LNGGFL--PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
             G +   P   SY++++  L        A  +F ++L + + P++ T+  ++   C   
Sbjct: 164 -KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVN 222

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
           ++ +  SL  +M K G  P++VV   LI+ L     + +AL+   +   M  +P++  FN
Sbjct: 223 EVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFN 282

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            ++ G CRL R  +  KL   M      P+ IT+ VL+ G+   G +  A +L    L +
Sbjct: 283 DVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL----LNK 338

Query: 518 GLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
             TP+ + ++ +I+G  K G+       ++  M +NG  PD+  +N L++ L K+  + +
Sbjct: 339 VPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGS 398

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           A+ +   ++  G  P++ITY T++ G+C  N     GY  +++
Sbjct: 399 AVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEM 441



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 4/299 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ + +  +++E+  +   MS  G  L+      L+  L  +  V +   +   M 
Sbjct: 418 YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMS 477

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       +  L+ GL +    E+A  ++R ++  G + N VT N ++      G I 
Sbjct: 478 DKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQ 537

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L + +L  G   + +T++ LI AFCK    EKA  L++ M+  DLVP  I  ++LI
Sbjct: 538 EALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLI 597

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL + G++    ELL   + RGL  DVV ++S+++    +G++  A   ++++   G  
Sbjct: 598 NGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQ 657

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           P+ I+Y+ LI   C+ G   +A  L  + +     P+ +T+  L+  F K     +G S
Sbjct: 658 PDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGIS 716


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 149/593 (25%), Positives = 282/593 (47%), Gaps = 54/593 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVI 92
           N ++    K  +   A   FK        P++     ++H L ++   D A     +MV 
Sbjct: 236 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 295

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +     N+              Y+ LI  Y   G+  E+V +F  M    I   PD+V  
Sbjct: 296 KRVLPNNW-------------TYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL--PDVVTL 340

Query: 151 QRLMSCLVDSNSVGQYYKL--CRAMRGKGFCV--YEFLMNGLLRKGVIENAFHMHRQVIQ 206
             LM  L     + +   +    AM+G+   V  Y  ++NG   KG + +   +   ++ 
Sbjct: 341 SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 400

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P+  T N ++K     G +  A  +F+ +   G KP+VVT+ T+I A C+  K++ 
Sbjct: 401 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 460

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A + +N M++  + PD   Y+ LI G    G L +  EL+   ++ G+ LD+V FSS+++
Sbjct: 461 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 520

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               +G V  A   +D  +N G  P+ + YS+L+ G C  G++ +A  +F  ++   +EP
Sbjct: 521 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 580

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
           +++ Y +L++G+CK G++ +G SL+  M++RG+KP  ++ S++I+GL        FQ+ R
Sbjct: 581 NVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL--------FQAGR 632

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              +P    F+ + +                      I  D+ T+ +++RG+        
Sbjct: 633 T--VPAKMKFHEMTES--------------------GIAMDICTYNIVLRGLFKNRCFDE 670

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           AI LF ++    +  ++IT + +I G+F+ + +     +F  + R+ + P++  Y++++ 
Sbjct: 671 AIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMIT 730

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            LIKE  ++ A  +F  + + G EP+    N ++      N  +  G + S+I
Sbjct: 731 NLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 783



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 254/536 (47%), Gaps = 51/536 (9%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMS-DMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           + L+E +    + DE+++I  + + ++G    PD+     L+  L D    GQ   L R 
Sbjct: 163 NHLLEGFCEAKRTDEALDILLHRTPELGCV--PDVFSYSILLKSLCDQGKSGQADDLLRM 220

Query: 173 M-RGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC-- 224
           M  G   C      Y  +++G  ++G +  A  + ++++QRG  P++VT N ++  LC  
Sbjct: 221 MAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKA 280

Query: 225 ---------------------------------INGQIGNASSLFDVLLLVGPKPNVVTF 251
                                              GQ   A  +F  +      P+VVT 
Sbjct: 281 RAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 340

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S L+ + CK  K+++A  +++ M      PD+  Y+I+++G    G L +  +L    L 
Sbjct: 341 SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 400

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G+  D   F+ ++ AY   G + +A+  ++ M + G  P+V++Y  +I  LC+ G++ +
Sbjct: 401 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 460

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A   F Q++ + + P    Y+ LI GFC  G L     L   ++  G+  D V  S +IN
Sbjct: 461 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 520

Query: 432 -----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                G + DA   F  +V + L P+  +++ LMDG C + +    +++F  M    I+P
Sbjct: 521 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 580

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +V+ +  L+ G    G +   + LF +ML+RG+ P  I YS II GLF+          F
Sbjct: 581 NVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKF 640

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             M  +G+A DI  YN++L  L K    D A+ LF +L    ++ +IIT NT+I G
Sbjct: 641 HEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 696



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 194/383 (50%), Gaps = 8/383 (2%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILI 290
           A + F  LL  G + N++  + L+  FC+  + ++A   L +   E+  VPD+  YSIL+
Sbjct: 143 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 202

Query: 291 DGLFKAGRLKEGNELLLTALDRGL--KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
             L   G+  + ++LL    + G     +VV +++V+D +   GDV +A   +  M+  G
Sbjct: 203 KSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 262

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++++Y+ ++  LC+   + +A     Q++ +R+ P+  TY++LI G+  +G+ ++  
Sbjct: 263 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 322

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            ++  M +  + PD V  S+L+      G + +A   F         P++F +N +++G 
Sbjct: 323 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 382

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
                  D   LF LM    I PD  T  VLI+  A+ G L  A+++F +M   G+ PDV
Sbjct: 383 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 442

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY  +I  L +   +   +  F  M   GVAPD   YN L+       +L  A +L  +
Sbjct: 443 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 502

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + + G+  DI+ +++II   C L
Sbjct: 503 IMNNGMHLDIVFFSSIINNLCKL 525



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 194/388 (50%), Gaps = 11/388 (2%)

Query: 243 GPK---PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           GP+   P   T++ L++   +  + E A   +  ++   L  ++II + L++G  +A R 
Sbjct: 116 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRT 175

Query: 300 KEGNELLL-TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL--PNVISY 356
            E  ++LL    + G   DV  +S ++ +    G  G+A      M  GG +  PNV++Y
Sbjct: 176 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 235

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + +I G  ++G + +AC LF +++ R + P L+TY+S++   CK+  +    +    M+ 
Sbjct: 236 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 295

Query: 417 RGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           + + P+    + LI      G   +A+R F +  R +++P++   + LM   C+  +  +
Sbjct: 296 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 355

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              +F  M M    PDV ++ +++ G A++G L     LF  ML  G+ PD  T++ +I 
Sbjct: 356 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 415

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
                  +   + +F  M  +GV PD+  Y  ++  L +   +D A++ F Q+ D+G+ P
Sbjct: 416 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 475

Query: 592 DIITYNTIICGYCSLNSCLIDGYFKSQI 619
           D   YN +I G+C+  S L      S+I
Sbjct: 476 DKYAYNCLIQGFCTHGSLLKAKELISEI 503



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 141/300 (47%), Gaps = 12/300 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS-VGQYYKLCR-- 171
           +S +I N  ++G++ ++  IF    ++G++  PD V  + S L+D    VG+  K  R  
Sbjct: 515 FSSIINNLCKLGRVMDAQNIFDLTVNVGLH--PDAV--VYSMLMDGYCLVGKMEKALRVF 570

Query: 172 -AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            AM   G      VY  L+NG  + G I+    + R+++QRG  P+ +  + I+  L   
Sbjct: 571 DAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA 630

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+   A   F  +   G   ++ T++ ++    K    ++A  L+  +  M++  ++I  
Sbjct: 631 GRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 690

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + +IDG+F+  R++E  +L  +     L  +VV +S ++   +  G V  A   +  M N
Sbjct: 691 NTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQN 750

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PN    + +++ L ++  +V A     ++  R      LT   L+D F   G  R+
Sbjct: 751 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 810


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/611 (24%), Positives = 270/611 (44%), Gaps = 53/611 (8%)

Query: 47  NPTPAIQFFKWTHN--CVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFF 101
           +P   + FF W+      S+P     A L   L    + ++A+ +  KM+  +       
Sbjct: 100 HPKLLLDFFYWSSPQLAPSAPAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVL 159

Query: 102 RLFRDSLGDFG----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
                +L D G         L++ Y + G++ ++ E+   M D G+  S      L+  L
Sbjct: 160 ASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDL 219

Query: 158 VDSNSVGQYYKLCRAMRGKG--------------FC------------------------ 179
           + ++++   +K+   M G G              +C                        
Sbjct: 220 LRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNT 279

Query: 180 -VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
             Y  L+ GL R G +E AF   + +   G VP+  T   ++  LC + +   A +L D 
Sbjct: 280 VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE 339

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +     KPNVV ++ LI+ F +E   ++AF++   M+   + P+ I Y  L+ GL K G+
Sbjct: 340 MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 399

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +   + LL   +    + D + ++ +++ +        A +    M N G  PNV +YSI
Sbjct: 400 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSI 459

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +I GLCQ G   +A  L  ++  + L+P+   Y+ LI G+C+ G +     ++D M K  
Sbjct: 460 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 519

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           + PD    + LI GL     + ++ ++F Q     L+PN F ++ L+ G  +        
Sbjct: 520 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAE 579

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +L   M    +KP+ + +  L+        +      F  ML +G+  D   Y  +IH L
Sbjct: 580 QLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 639

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
               N+     +   +E+NG  PD+ +Y+ L++ L K  + + A  +  +++ +G++P+I
Sbjct: 640 SSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNI 699

Query: 594 ITYNTIICGYC 604
           + YN +I G C
Sbjct: 700 VCYNALIDGLC 710



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 256/537 (47%), Gaps = 51/537 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPD--LVQRLMSCLVDSNSVGQYYKLCR 171
           Y+ LI    R G ++E+   F +  DM  Y L PD      L++ L  S    +   L  
Sbjct: 282 YNVLIAGLCRSGAVEEA---FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 338

Query: 172 AMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M          VY  L++G +R+G  + AF M ++++  G  PN +T + +++ LC  G
Sbjct: 339 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 398

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           Q+  AS L   ++    +P+ +T++ +I    +    + AF+L + M    + P++  YS
Sbjct: 399 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYS 458

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I+I GL ++G  ++ ++LL     +GLK +  V++ ++  Y   G+V  A + +D+M   
Sbjct: 459 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV 518

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
             LP++  Y+ LI GL + GR+ E+   F Q+  R L P+  TYS LI G+ K+G L   
Sbjct: 519 NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA 578

Query: 408 FSLYDNMIKRGLKPDAVVC---------------------SLLINGLMGD---------- 436
             L   M+  GLKP+ V+                      S+L  G+M D          
Sbjct: 579 EQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHN 638

Query: 437 ---------ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                    A R      +   +P++ ++++L+ G C+         +   M    + P+
Sbjct: 639 LSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 698

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           ++ +  LI G+   G +S A  +F  +L +GL P+ +TY+++I G  K  +IS   +++ 
Sbjct: 699 IVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYN 758

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            M   G+ PD  +Y+VL        +L+ A+ L  ++  RG    I ++N ++ G+C
Sbjct: 759 EMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFC 814



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 161/609 (26%), Positives = 266/609 (43%), Gaps = 78/609 (12%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N I+    + ++   A +      N   SPN+   + +IH L QS   + AS + ++M  
Sbjct: 423 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 482

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +  K   F              Y+ LI  Y R G +  + EIF  M+ + +   PDL   
Sbjct: 483 KGLKPNAFV-------------YAPLISGYCREGNVSLACEIFDKMTKVNVL--PDL--- 524

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                                    +C Y  L+ GL + G +E +     Q+ +RG +PN
Sbjct: 525 -------------------------YC-YNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 558

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
             T + ++     NG + +A  L   +L  G KPN V +  L+ ++ K   +EK    + 
Sbjct: 559 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 618

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M++  ++ D  IY ILI  L  +G ++    +L      G   DV V+SS++       
Sbjct: 619 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTA 678

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           D  +A    D M   G  PN++ Y+ LI GLC+ G +  A  +F  +L + L P+ +TY+
Sbjct: 679 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 738

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLI 450
           SLIDG CK G + + F LY+ M+  G+ PDA V S+L  G    GD  +  F    M L 
Sbjct: 739 SLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 798

Query: 451 PNLFI--FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
            +  I  FN L+DG C+  +  +T+KL  ++    + P+ +T   +I G++  G LS   
Sbjct: 799 GHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 858

Query: 509 L-------------------LFFQMLKRGLTP-DVITYSAIIHGLFKGKNISVGLHMFKL 548
                               LF  M+ +G  P DV+    +I    K  N+   L +  +
Sbjct: 859 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDV 916

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD-----IITYNTIICGY 603
           +         + Y  +++ L ++  L  AL L  ++  RG+ P      I+  N    GY
Sbjct: 917 IVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGY 976

Query: 604 CSLNSCLID 612
              ++ ++D
Sbjct: 977 IQEHNTVLD 985



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 170/408 (41%), Gaps = 98/408 (24%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y  L+E+Y +   I++    F  M D G+ L   +   L+  L  S ++   +++   + 
Sbjct: 597  YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 656

Query: 175  GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
              G      VY  L++GL +    E AF +  ++ ++G  PNIV  N ++  LC +G I 
Sbjct: 657  KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 716

Query: 231  NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL- 289
             A ++F+ +L  G  PN VT+++LI+  CK   +  AF LYN M+   + PD  +YS+L 
Sbjct: 717  YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 776

Query: 290  ---------------------------------IDGLFKAGRLKEGNELLLTALDRGLKL 316
                                             +DG  K G+++E  +LL   + RGL  
Sbjct: 777  TGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVP 836

Query: 317  DVVVFSSVMDAYVGIGDVGRAVQTYD----------------------RMLNGGFLP--- 351
            + +   +++    G+ + G+  + +                        M+N G +P   
Sbjct: 837  NALTIENIIS---GLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDV 893

Query: 352  ---------------------NVI----------SYSILIKGLCQQGRLVEACGLFGQVL 380
                                 +VI          SY  ++  LC++G+L EA  L  ++ 
Sbjct: 894  VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMD 953

Query: 381  IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI-KRGLKPDAVVCS 427
             R + PS      L+     SG +++  ++ DNM+  + L+ D+  C+
Sbjct: 954  KRGICPSENQCLILLTNLHTSGYIQEHNTVLDNMLCHKWLQKDSKFCN 1001


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 168/643 (26%), Positives = 295/643 (45%), Gaps = 87/643 (13%)

Query: 51  AIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQFG--KTYNFFRLFR 105
           A  FFK      S   +     L H+L    +R +A  +   +V + G  ++ N      
Sbjct: 149 AYAFFKLAFKDDSEETVRSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMW 208

Query: 106 DSLGDFGCDYSFL---IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS 162
           +    +  DYS L   +  +V+     E++EI + M ++G+  +P  +  L   L+ +  
Sbjct: 209 EGHRVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGD 268

Query: 163 VGQYYKLCRAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
            G  +KL   +  KG C   F  N L+    RKG       +   + +    P++ + N 
Sbjct: 269 CGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNI 328

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ--------- 269
           ++   C+ GQ   A  L ++++  G KP++ TF T+I+AFCKE  +E A +         
Sbjct: 329 VINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMG 388

Query: 270 ------LYNLMM-----------------EM---DLVPDLIIYSILIDGLFKAGRLKEGN 303
                 +YN+M+                 EM   D+VPD I ++ L+ G ++ G+ ++GN
Sbjct: 389 LSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGN 448

Query: 304 ELL----LTAL--------------------DRGLKL-----------DVVVFSSVMDAY 328
            LL    ++ L                    D  +KL            VV F+S++ AY
Sbjct: 449 RLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAY 508

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G   RA   Y  M+  G  P+  + S L+  L ++G L EA      ++ +    + 
Sbjct: 509 GNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTN 568

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQ 443
           + ++ L+DG+ + G +    SL++ M  RG+ PDAV  +  IN     GLM DA   F  
Sbjct: 569 MAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSD 628

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            +R   +PN F++N+L+ G C++ +  + +KL   M    + PD+ T  ++I G+  QG 
Sbjct: 629 MLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGR 688

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  AI  F  M + GL+PD++TY+ +I G  K  ++     +   M  +G  PD+  YN+
Sbjct: 689 MKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNI 748

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            ++       ++ A+ +  +L   G+ P+ +TYNT+I   C++
Sbjct: 749 RIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNV 791



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 240/503 (47%), Gaps = 16/503 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +I+ + + G ++ + + F  + DMG+  +  +   ++S  V +  + Q   L   MR K 
Sbjct: 364 IIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKD 423

Query: 178 FC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  +  L+ G  R G  E+   + R +   G + +   C+  +  LC  G+   A 
Sbjct: 424 IVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAM 483

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L + LL  G  P+VV F+++I A+      E+AF  Y +M++  L P     S L+  L
Sbjct: 484 KLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISL 543

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G L E    L   +D+G  +  + F+ ++D Y  IG V  A   ++ M   G  P+ 
Sbjct: 544 VRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDA 603

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++++  I GLC  G + +A  +F  +L +   P+   Y+SLI GFCK GKL +   L   
Sbjct: 604 VAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVRE 663

Query: 414 MIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M KRGL PD      ++C L   G M  A+  F    RM L P++  +NTL+DG C+   
Sbjct: 664 MNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFD 723

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 L M M     +PD+ T+ + I G  +   ++ A+++  +++  G+ P+ +TY+ 
Sbjct: 724 VGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNT 783

Query: 529 IIHGLFKGKNISVGLHMF---KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           +I+ +    N+ +   M    KL+ +    P+    NVLL+   K+   + A+    +L+
Sbjct: 784 MINAVC---NVILDHAMILTAKLL-KMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLS 839

Query: 586 DRGLEPDIITYNTIICGYCSLNS 608
           +  L+ D  T+  +   Y +L  
Sbjct: 840 EIHLDFDETTHKLMNRAYRALEE 862


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 144/540 (26%), Positives = 251/540 (46%), Gaps = 53/540 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S +I    + GK+ E   +   M +MG+Y  P+ V    + LVDS    + Y+   A+ 
Sbjct: 262 FSSIINRLCKDGKVMEGGLLLREMEEMGVY--PNHVT--YTTLVDSLFKAKDYRHALALY 317

Query: 175 GK--------GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            +           VY  LM GL + G +  A    + +++   VPN+VT   ++  LC  
Sbjct: 318 SQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKA 377

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G + +A  +   +L     PNVVT+S++IN + K+  LE+A  L   M + ++VP+   Y
Sbjct: 378 GDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTY 437

Query: 287 SILIDGLFKAG-----------------------------------RLKEGNELLLTALD 311
             +IDGLFKAG                                   R+KE   L+   + 
Sbjct: 438 GTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 497

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           +G+ LD + ++S++D +   GD   A+   + M       +V+SY++LI GL + G+ V 
Sbjct: 498 KGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGK-VG 556

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI- 430
           A   +  +  + +EP + T++ +++   K G       L+D M   G+KP  ++C++++ 
Sbjct: 557 ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVG 616

Query: 431 ----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                G M +A+    Q + M + PNL  +   +D   + KRA    K    +  Y IK 
Sbjct: 617 MLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKL 676

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
               +  LI  +   G    A ++   M  RG  PD +T++A++HG F G ++   L  +
Sbjct: 677 SRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTY 736

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +M   G++P++A YN ++  L     +    K   ++  RG+ PD  TYN +I G   +
Sbjct: 737 SMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKI 796



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 230/495 (46%), Gaps = 42/495 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQYYK---LC 170
           Y+ +I      G  DE+ +  + M  +GI   PD V    + L+D    VG + +   L 
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKIGIL--PDTVS--FNTLIDGFCKVGNFARAKALV 219

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             +       +  L++       IE A+   R ++  GF P++VT + I+ RLC +G++ 
Sbjct: 220 DEISELNLITHTILISSYYNLHAIEEAY---RDMVMSGFDPDVVTFSSIINRLCKDGKVM 276

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               L   +  +G  PN VT++TL+++  K      A  LY+ M+   +  DL++Y++L+
Sbjct: 277 EGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLM 336

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GLFKAG L+E  +     L+     +VV +++++D     GD+  A     +ML     
Sbjct: 337 AGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVF 396

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV++YS +I G  ++G L EA  L  ++  + + P+  TY ++IDG  K+GK      +
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEM 456

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M   G++                               N +I + L++   R+ R  
Sbjct: 457 SKEMRLIGVE------------------------------ENNYILDALVNHLKRIGRIK 486

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +   L   M    +  D I +T LI      G   +A+    +M ++ +  DV++Y+ +I
Sbjct: 487 EVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLI 546

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL K   +      +K M   G+ PDIA +N+++N   K+ + +  LKL+ ++   G++
Sbjct: 547 SGLLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIK 605

Query: 591 PDIITYNTIICGYCS 605
           P ++  N ++   C 
Sbjct: 606 PSLMICNIVVGMLCE 620



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 222/432 (51%), Gaps = 31/432 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +++F +NGL+   V      ++ ++I  G  P++   N ++  LC  GQ+  A SL    
Sbjct: 100 IHQFNVNGLVHDQV----SLVYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLRNR 155

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           ++     + VT++T+I+  C+    ++A+Q  + M+++ ++PD + ++ LIDG  K G  
Sbjct: 156 VI---SVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNF 212

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L    +D   +L+++  + ++ +Y  +  +  A   Y  M+  GF P+V+++S +
Sbjct: 213 ARAKAL----VDEISELNLITHTILISSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSI 265

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           I  LC+ G+++E     G +L+R +E     P+ +TY++L+D   K+   R   +LY  M
Sbjct: 266 INRLCKDGKVME-----GGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQM 320

Query: 415 IKRGLKPDAVVCSLLINGLM--GDALRFFFQSVRMTL----IPNLFIFNTLMDGCCRLKR 468
           + RG+  D VV ++L+ GL   GD LR   ++ +M L    +PN+  +  L+DG C+   
Sbjct: 321 VVRGIPVDLVVYTVLMAGLFKAGD-LREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGD 379

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            +    +   M   ++ P+V+T++ +I G   +G L  A+ L  +M  + + P+  TY  
Sbjct: 380 LSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGT 439

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I GLFK     V   M K M   GV  +  I + L+N L +   +     L   +  +G
Sbjct: 440 VIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499

Query: 589 LEPDIITYNTII 600
           +  D I Y ++I
Sbjct: 500 VTLDHINYTSLI 511



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 229/501 (45%), Gaps = 45/501 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I  YV+ G ++E+V +   M D  +   P+                          
Sbjct: 402 YSSMINGYVKKGMLEEAVSLMRKMEDQNVV--PN-------------------------- 433

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
             GF  Y  +++GL + G  E A  M +++   G   N    + ++  L   G+I     
Sbjct: 434 --GF-TYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 490

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   ++  G   + + +++LI+ F K    E A      M E ++  D++ Y++LI GL 
Sbjct: 491 LVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLL 550

Query: 295 KAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
           K G++  G +     + ++G++ D+  F+ +M++    GD    ++ +D+M + G  P++
Sbjct: 551 KFGKV--GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSL 608

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           +  +I++  LC++G++ EA  +  Q++   + P+L TY   +D   K  +    F  ++ 
Sbjct: 609 MICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHET 668

Query: 414 MIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG---CCR 465
           ++  G+K    V + LI      G+   A            +P+   FN LM G      
Sbjct: 669 LLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSH 728

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           + +A  T  + M  G   I P+V T+  +IRG++  G +        +M  RG+ PD  T
Sbjct: 729 VGKALSTYSMMMEAG---ISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFT 785

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+A+I G  K  N    + ++  M  +G+ P  + YNVL++   K   +  A +L  ++ 
Sbjct: 786 YNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMG 845

Query: 586 DRGLEPDIITYNTIICGYCSL 606
            R + P+  TY T+I G C L
Sbjct: 846 KRRVSPNTSTYCTMISGLCKL 866



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 156/336 (46%), Gaps = 19/336 (5%)

Query: 281 PDLI-----IYSILIDGLFK----AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           PDL      +Y  L   LF+     GRL      L      G+  D+ +++S++  +   
Sbjct: 47  PDLALNKTRVYVSLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVN 106

Query: 332 GDVGRAVQ-TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
           G V   V   Y +M+  G  P+V + ++LI  LC+ G+L  A  L      R +    +T
Sbjct: 107 GLVHDQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLRN---RVISVDTVT 163

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMT 448
           Y+++I G C+ G   + +     M+K G+ PD V  + LI+G   +G+  R       ++
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEIS 223

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
            + NL     L+     L    +  +  ++ G     PDV+T + +I  +   G +    
Sbjct: 224 EL-NLITHTILISSYYNLHAIEEAYRDMVMSG---FDPDVVTFSSIINRLCKDGKVMEGG 279

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           LL  +M + G+ P+ +TY+ ++  LFK K+    L ++  M   G+  D+ +Y VL+  L
Sbjct: 280 LLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGL 339

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            K  +L  A K F  L +    P+++TY  ++ G C
Sbjct: 340 FKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLC 375


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 246/501 (49%), Gaps = 10/501 (1%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           C Y+ L++   + GK+ E+  + A M    +  +      LM        V +   +  A
Sbjct: 204 CTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNA 263

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  ++NG  +   ++ A ++ +++I   F P I+  NKIL        
Sbjct: 264 MSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF-PPIIQFNKILDSFAKMKH 322

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A SL   L L G +P++ T + LIN FC   ++   F +   +++    P  +  + 
Sbjct: 323 YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNT 382

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL   G++K+        L +G +L+ V ++++++    IGD   A++   ++    
Sbjct: 383 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 442

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV  YS +I  LC+   + EA GLF ++ ++ +   ++TYS+LI GFC  GKL++  
Sbjct: 443 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAI 502

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L + M+ + + PD    ++L++ L     + +A       ++  + P++F +NTLM+G 
Sbjct: 503 GLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGY 562

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
             +        +F  M +  + PDV T+T+LI G      +  A+ LF +M ++ + PD 
Sbjct: 563 LLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDT 622

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TYS+++ GL K   IS    +   M   G   D+  YN L++ L K  +LD A+ LF +
Sbjct: 623 VTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNK 682

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           + D+G+ P+  T+  ++ G C
Sbjct: 683 MKDQGIRPNTFTFTILLDGLC 703



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 228/478 (47%), Gaps = 34/478 (7%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + LI  +  +G+I     + A +   G   S   +  L+  L     V +       +  
Sbjct: 346 NILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLA 405

Query: 176 KGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF +    Y  L+NG+ + G    A  + R++  R   PN+   + I+  LC    +  
Sbjct: 406 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 465

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  LF  + + G   +VVT+STLI  FC   KL++A  L N M+   + PD+  Y+IL+D
Sbjct: 466 AYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVD 525

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G++KE   +L   L   +K DV  ++++M+ Y+ + +V +A   ++ M   G  P
Sbjct: 526 ALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTP 585

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V +Y+ILI G C+   + EA  LF ++  + + P  +TYSSL+DG CKSG++   + L 
Sbjct: 586 DVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLI 645

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           D M  RG   D +                               +N+L+DG C+      
Sbjct: 646 DEMRDRGQPADVIT------------------------------YNSLIDGLCKNGHLDK 675

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            + LF  M    I+P+  T T+L+ G+   G L  A  +F  +L +G   DV  Y+ +I+
Sbjct: 676 AIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIY 735

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           G  K   +   L M   ME NG  P+   +++++N L K+   D A KL  Q+  RGL
Sbjct: 736 GHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 233/498 (46%), Gaps = 74/498 (14%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+NG+ R G    A    R++  R   PN+   N I+  LC    +  A  LF  + 
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           + G   NVVT+STLI  FC   KL++A  L N+M+   + P++  Y+IL+D L K G++K
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   +L   L   +K +V+ +S++MD Y  + +V +A   ++ M   G  P+V SY+I+I
Sbjct: 221 EAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMI 280

Query: 361 KGLCQQGRLVEACGLFGQVLIRR----------------------------------LEP 386
            G C+  R+ +A  LF ++++ R                                  ++P
Sbjct: 281 NGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQP 340

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF- 440
            L T + LI+ FC  G++  GFS+   ++KRG  P  V  + LI GL     +  AL F 
Sbjct: 341 DLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFH 400

Query: 441 ---------FFQSVRMTLI-------------------------PNLFIFNTLMDGCCRL 466
                      Q    TLI                         PN+ +++T++D  C+ 
Sbjct: 401 DKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKY 460

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           +  ++   LF  M +  I  DV+T++ LI G    G L  AI L  +M+ + + PDV TY
Sbjct: 461 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTY 520

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + ++  L K   +     +  +M +  V PD+  YN L+N  +    +  A  +F  ++ 
Sbjct: 521 TILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL 580

Query: 587 RGLEPDIITYNTIICGYC 604
            G+ PD+ TY  +I G+C
Sbjct: 581 MGVTPDVHTYTILINGFC 598



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 248/500 (49%), Gaps = 12/500 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           YS L++ Y  + ++ ++  +F  MS MG+  +PD+     +++       V +   L + 
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGV--TPDVHSYNIMINGFCKIKRVDKALNLFKE 298

Query: 173 M---RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           M   R      +  +++   +      A  +  ++  +G  P++ T N ++   C  GQI
Sbjct: 299 MILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQI 358

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
               S+   +L  G  P+ VT +TLI   C + +++KA   ++ ++      + + Y+ L
Sbjct: 359 TFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATL 418

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I+G+ K G  +   +LL     R  K +V ++S+++DA      V  A   +  M   G 
Sbjct: 419 INGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGI 478

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             +V++YS LI G C  G+L EA GL  +++++ + P + TY+ L+D   K GK+++  S
Sbjct: 479 SADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKS 538

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           +   M+K  +KPD    + L+NG +       A   F     M + P++  +  L++G C
Sbjct: 539 VLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 598

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           + K   + + LF  M   N+ PD +T++ L+ G+   G +S    L  +M  RG   DVI
Sbjct: 599 KSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVI 658

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+++I GL K  ++   + +F  M+  G+ P+   + +LL+ L K   L  A ++F  L
Sbjct: 659 TYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 718

Query: 585 TDRGLEPDIITYNTIICGYC 604
             +G   D+  YN +I G+C
Sbjct: 719 LTKGYHLDVYIYNVMIYGHC 738



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 259/499 (51%), Gaps = 18/499 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK----LC 170
           Y+ +I  + +I ++D+++ +F    +M +   P ++Q   + ++DS +  ++Y     L 
Sbjct: 276 YNIMINGFCKIKRVDKALNLF---KEMILSRFPPIIQ--FNKILDSFAKMKHYSTAVSLS 330

Query: 171 RAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             +  KG     F +N L+      G I   F +  ++++RG+ P+ VT N ++K LC+ 
Sbjct: 331 HRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLK 390

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           GQ+  A    D LL  G + N V+++TLIN  CK      A +L   +      P++ +Y
Sbjct: 391 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMY 450

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           S +ID L K   + E   L      +G+  DVV +S+++  +  +G +  A+   + M+ 
Sbjct: 451 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVL 510

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               P+V +Y+IL+  L ++G++ EA  +   +L   ++P + TY++L++G+    +++ 
Sbjct: 511 KTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKK 570

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              +++ M   G+ PD    ++LING     ++ +AL  F +  +  ++P+   +++L+D
Sbjct: 571 AQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVD 630

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+  R +    L   M       DVIT+  LI G+   G L  AI LF +M  +G+ P
Sbjct: 631 GLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRP 690

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           +  T++ ++ GL KG  +     +F+ +   G   D+ IYNV++    K+  L+ AL + 
Sbjct: 691 NTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTML 750

Query: 582 GQLTDRGLEPDIITYNTII 600
            ++ + G  P+ +T++ II
Sbjct: 751 SKMEENGCIPNAVTFDIII 769



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 201/445 (45%), Gaps = 74/445 (16%)

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           S+   +L  G  P+ VT +TLI   C + ++++A   ++ ++      + + Y+ LI+G+
Sbjct: 49  SVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGV 108

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G  +   + L     R  K +V ++++++DA      V  A   +  M   G   NV
Sbjct: 109 CRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANV 168

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++YS LI G C  G+L EA GL   ++++ + P++ TY+ L+D  CK GK+++  S+   
Sbjct: 169 VTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAV 228

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M+K  +K + +  S L++G      +  A   F     M + P++  +N +++G C++KR
Sbjct: 229 MLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKR 288

Query: 469 ATDTVKLFMLM----------------------------------GMYNIKPDVITHTVL 494
               + LF  M                                   +  I+PD+ T  +L
Sbjct: 289 VDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNIL 348

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF-KLMER-- 551
           I      G ++    +  ++LKRG  P  +T + +I GL     +   LH   KL+ +  
Sbjct: 349 INCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 408

Query: 552 -----------NGV---------------------APDIAIYNVLLNMLIKECNLDAALK 579
                      NGV                      P++ +Y+ +++ L K   +  A  
Sbjct: 409 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 468

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           LF ++T +G+  D++TY+T+I G+C
Sbjct: 469 LFSEMTVKGISADVVTYSTLIYGFC 493



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 143/276 (51%), Gaps = 8/276 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++   + GK+ E+  + A M  +   + PD+     LM+  +    V +   +  A
Sbjct: 520 YTILVDALGKEGKVKEAKSVLAVM--LKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNA 577

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  L+NG  +  +++ A ++ +++ Q+  VP+ VT + ++  LC +G+
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I     L D +   G   +V+T+++LI+  CK   L+KA  L+N M +  + P+   ++I
Sbjct: 638 ISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTI 697

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+DGL K GRLK+  E+    L +G  LDV +++ ++  +   G +  A+    +M   G
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
            +PN +++ I+I  L ++    +A  L  Q++ R L
Sbjct: 758 CIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 182/418 (43%), Gaps = 69/418 (16%)

Query: 31  QFNQAN-AILAN-LIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASH 85
           Q NQ + A L N + K  +   AI+  +     ++ PN+   + +I  L +  +   A  
Sbjct: 409 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 468

Query: 86  VFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           +F +M ++              +      YS LI  +  +GK+ E++ +   M    I  
Sbjct: 469 LFSEMTVK-------------GISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTI-- 513

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CV------YEFLMNGLLRKGVIE 195
           +PD+  R  + LVD+  +G+  K+  A          CV      Y  LMNG L    ++
Sbjct: 514 NPDV--RTYTILVDA--LGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A H+   +   G  P++ T   ++   C +  +  A +LF  +      P+ VT+S+L+
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +  CK  ++   + L + M +     D+I Y+ LIDGL K G            LD+ + 
Sbjct: 630 DGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGH-----------LDKAIA 678

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           L                        +++M + G  PN  +++IL+ GLC+ GRL +A  +
Sbjct: 679 L------------------------FNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEV 714

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           F  +L +     +  Y+ +I G CK G L +  ++   M + G  P+AV   ++IN L
Sbjct: 715 FQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 116/240 (48%), Gaps = 4/240 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+  Y+ + ++ ++  +F  MS MG+         L++    S  V +   L + M 
Sbjct: 555 YNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMH 614

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K        Y  L++GL + G I   + +  ++  RG   +++T N ++  LC NG + 
Sbjct: 615 QKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLD 674

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +LF+ +   G +PN  TF+ L++  CK  +L+ A +++  ++      D+ IY+++I
Sbjct: 675 KAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMI 734

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K G L+E   +L    + G   + V F  +++A     +  +A +   +M+  G L
Sbjct: 735 YGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 253/534 (47%), Gaps = 51/534 (9%)

Query: 118 LIENYVRIGKIDESVEIFAYMS-DMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAM- 173
           L+E +    + DE+++I  + + ++G    PD+     L+  L D    GQ   L R M 
Sbjct: 152 LLEGFCEAKRTDEALDILLHRTPELGCV--PDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 174 RGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC---- 224
            G   C      Y  +++G  ++G +  A  + ++++QRG  P++VT N ++  LC    
Sbjct: 210 EGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 269

Query: 225 -------------------------------INGQIGNASSLFDVLLLVGPKPNVVTFST 253
                                            GQ   A  +F  +      P+VVT S 
Sbjct: 270 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L+ + CK  K+++A  +++ M      PD+  Y+I+++G    G L +  +L    L  G
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 389

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  D   F+ ++ AY   G + +A+  ++ M + G  P+V++Y  +I  LC+ G++ +A 
Sbjct: 390 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
             F Q++ + + P    Y+ LI GFC  G L     L   ++  G+  D V  S +IN  
Sbjct: 450 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509

Query: 432 ---GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
              G + DA   F  +V + L P+  +++ LMDG C + +    +++F  M    I+P+V
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 569

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           + +  L+ G    G +   + LF +ML+RG+ P  I YS II GLF+          F  
Sbjct: 570 VVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHE 629

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           M  +G+A DI  YN++L  L K    D A+ LF +L    ++ +IIT NT+I G
Sbjct: 630 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 683



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 149/593 (25%), Positives = 281/593 (47%), Gaps = 54/593 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVI 92
           N ++    K  +   A   FK        P++     ++H L ++   D A     +MV 
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 282

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +     N+              Y+ LI  Y   G+  E+V +F  M    I   PD+V  
Sbjct: 283 KRVLPNNW-------------TYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL--PDVVTL 327

Query: 151 QRLMSCLVDSNSVGQYYKL--CRAMRGKGFCV--YEFLMNGLLRKGVIENAFHMHRQVIQ 206
             LM  L     + +   +    AM+G+   V  Y  ++NG   KG + +   +   ++ 
Sbjct: 328 SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 387

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P+  T N ++K     G +  A  +F+ +   G KP+VVT+ T+I A C+  K++ 
Sbjct: 388 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A + +N M++  + PD   Y+ LI G    G L +  EL+   ++ G+ LD+V FSS+++
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               +G V  A   +D  +N G  P+ + YS+L+ G C  G++ +A  +F  ++   +EP
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
           +++ Y +L++G+CK G++ +G SL+  M++RG+KP  ++ S++I+GL        FQ+ R
Sbjct: 568 NVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL--------FQAGR 619

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              +P    F+ + +                      I  D+ T+ +++RG+        
Sbjct: 620 T--VPAKVKFHEMTES--------------------GIAMDICTYNIVLRGLFKNRCFDE 657

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           AI LF ++    +  ++IT + +I G+F+ + +     +F  + R+ + P +  Y++++ 
Sbjct: 658 AIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMIT 717

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            LIKE  ++ A  +F  + + G EP+    N ++      N  +  G + S+I
Sbjct: 718 NLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 770



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 194/383 (50%), Gaps = 8/383 (2%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILI 290
           A + F  LL  G + N++  + L+  FC+  + ++A   L +   E+  VPD+  YSIL+
Sbjct: 130 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 189

Query: 291 DGLFKAGRLKEGNELLLTALDRGL--KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
             L   G+  + ++LL    + G     +VV +++V+D +   GDV +A   +  M+  G
Sbjct: 190 KSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 249

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++++Y+ ++  LC+   + +A     Q++ +R+ P+  TY++LI G+  +G+ ++  
Sbjct: 250 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 309

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            ++  M +  + PD V  S+L+      G + +A   F         P++F +N +++G 
Sbjct: 310 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 369

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
                  D   LF LM    I PD  T  VLI+  A+ G L  A+++F +M   G+ PDV
Sbjct: 370 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 429

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY  +I  L +   +   +  F  M   GVAPD   YN L+       +L  A +L  +
Sbjct: 430 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 489

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + + G+  DI+ +++II   C L
Sbjct: 490 IMNNGMHLDIVFFSSIINNLCKL 512



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 194/388 (50%), Gaps = 11/388 (2%)

Query: 243 GPK---PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           GP+   P   T++ L++   +  + E A   +  ++   L  ++II + L++G  +A R 
Sbjct: 103 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRT 162

Query: 300 KEGNELLL-TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL--PNVISY 356
            E  ++LL    + G   DV  +S ++ +    G  G+A      M  GG +  PNV++Y
Sbjct: 163 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 222

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + +I G  ++G + +AC LF +++ R + P L+TY+S++   CK+  +    +    M+ 
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 282

Query: 417 RGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           + + P+    + LI      G   +A+R F +  R +++P++   + LM   C+  +  +
Sbjct: 283 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              +F  M M    PDV ++ +++ G A++G L     LF  ML  G+ PD  T++ +I 
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 402

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
                  +   + +F  M  +GV PD+  Y  ++  L +   +D A++ F Q+ D+G+ P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 592 DIITYNTIICGYCSLNSCLIDGYFKSQI 619
           D   YN +I G+C+  S L      S+I
Sbjct: 463 DKYAYNCLIQGFCTHGSLLKAKELISEI 490



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 140/300 (46%), Gaps = 12/300 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS-VGQYYKLCR-- 171
           +S +I N  ++G++ ++  IF    ++G++  PD V  + S L+D    VG+  K  R  
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLH--PDAV--VYSMLMDGYCLVGKMEKALRVF 557

Query: 172 -AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            AM   G      VY  L+NG  + G I+    + R+++QRG  P+ +  + I+  L   
Sbjct: 558 DAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA 617

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+   A   F  +   G   ++ T++ ++    K    ++A  L+  +  M++  ++I  
Sbjct: 618 GRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 677

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + +IDG+F+  R++E  +L  +     L   VV +S ++   +  G V  A   +  M N
Sbjct: 678 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PN    + +++ L ++  +V A     ++  R      LT   L+D F   G  R+
Sbjct: 738 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 227/488 (46%), Gaps = 44/488 (9%)

Query: 97  TYNFFRLFRDS---LGDFGCDYSFLIENYV-------RIGKIDESVEIFAYMSDMGIYLS 146
           T + FRL   S   +  F C +  L E          R GK   S    + +   G + S
Sbjct: 95  TQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQS 154

Query: 147 PDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHR 202
             +   LM+   DS       +  R +R       F    +L + L++  +   A+  + 
Sbjct: 155 NLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYE 214

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +++  G+ P++   N ++ RLC   +I  A  LF  +   G +P VV+F+TLIN +CK  
Sbjct: 215 EILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSG 274

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L++ F+L   MME  + PD+  YS+LI+GL K G+L + N+L L   DRGL  + V F+
Sbjct: 275 NLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFT 334

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           ++++ +   G     ++ Y +ML  G  P+VI+Y+ LI GLC+ G L EA  L  ++  R
Sbjct: 335 TLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR 394

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            L+P   TY+ LIDG CK G L     +   M+K G++ D V                  
Sbjct: 395 GLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA----------------- 437

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                        F  L+ G CR  +  +  +    M    IKPD  T+T++I G   +G
Sbjct: 438 -------------FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKG 484

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            + +   L  +M   G  P V+TY+ +++GL K   +     +   M   GV PD   YN
Sbjct: 485 DVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYN 544

Query: 563 VLLNMLIK 570
           +LL   ++
Sbjct: 545 ILLERTLQ 552



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 185/339 (54%), Gaps = 5/339 (1%)

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A+  Y  +++    PD+  +++L+  L K  ++ E   L      RGL+  VV F+++++
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y   G++ +  +    M+     P+V +YS+LI GLC++G+L +A  LF ++  R L P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFF 441
           + +T+++LI+G C +G+   G  +Y  M+++G+KPD +  + LINGL  +GD   A +  
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +  +  L P+ F +  L+DGCC+       +++   M    I+ D +  T LI G   +
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCRE 448

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +  A     +ML+ G+ PD  TY+ +IHG  K  ++  G  + K M+ +G  P +  Y
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTY 508

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           NVLLN L K+  +  A  L   + + G+ PD ITYN ++
Sbjct: 509 NVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 173/326 (53%), Gaps = 5/326 (1%)

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           +++S+L++    +G   +  +         L++       + D  + +     A   Y+ 
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           +L+ G+ P+V  +++L+  LC++ ++ EA  LFG++  R L P+++++++LI+G+CKSG 
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           L  GF L   M++  + PD    S+LINGL     + DA + F +     L+PN   F T
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L++G C   RA   ++++  M    +KPDVIT+  LI G+   G L  A  L  +M +RG
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           L PD  TY+ +I G  K  ++   L + K M + G+  D   +  L++   +E  +  A 
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYC 604
           +   ++ + G++PD  TY  +I G+C
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFC 481



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 186/420 (44%), Gaps = 77/420 (18%)

Query: 24  KTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVA 83
           + H   + F+    +   L+K N  +PA  F++   +C   P++ +  +VL+    R   
Sbjct: 182 RKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKF-NVLMH---RLCK 237

Query: 84  SHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGI 143
            H  ++  + FG+     R  R ++  F    + LI  Y + G +D+   +  +M +  +
Sbjct: 238 EHKINEAQLLFGEIGK--RGLRPTVVSF----NTLINGYCKSGNLDQGFRLKRFMMENRV 291

Query: 144 YLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQ 203
           +  PD+                               Y  L+NGL ++G +++A  +  +
Sbjct: 292 F--PDVF-----------------------------TYSVLINGLCKEGQLDDANKLFLE 320

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +  RG VPN VT   ++   C+ G+      ++  +L  G KP+V+T++TLIN  CK   
Sbjct: 321 MCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L +A +L   M +  L PD   Y++LIDG  K G L+   E+    +  G++LD V F++
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGF---------------------------------- 349
           ++  +   G V  A +T   ML  G                                   
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500

Query: 350 -LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            +P V++Y++L+ GLC+QG++  A  L   +L   + P  +TY+ L++   ++ K + GF
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWK-QGGF 559



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 121/277 (43%), Gaps = 22/277 (7%)

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRR-----------------LEPSLLTYSSL 394
           ++ SY  +   LC    L EA  L   V+ R+                    S L +S L
Sbjct: 102 SIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVL 161

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTL 449
           ++ +  SG   D    +  + K  L+     C  L + LM       A  F+ + +    
Sbjct: 162 MNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGY 221

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            P++  FN LM   C+  +  +   LF  +G   ++P V++   LI G    G+L     
Sbjct: 222 PPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           L   M++  + PDV TYS +I+GL K   +     +F  M   G+ P+   +  L+N   
Sbjct: 282 LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHC 341

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
                D  ++++ Q+  +G++PD+ITYNT+I G C +
Sbjct: 342 VTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKV 378


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 240/441 (54%), Gaps = 14/441 (3%)

Query: 174 RGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +G    VY F  +M  L     +++A  + + + + G VPN +    ++  L   G++  
Sbjct: 211 KGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNE 270

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
              L + +LL+G  P+V TF+  I+  CK  ++ +A +L + M+     P+   Y +L+ 
Sbjct: 271 VLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMH 330

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG--DVGRAVQTYDRMLNGGF 349
           GL + G++ E   LL    ++    +VV+F+++++ YV  G  D  +AV  ++ ML+ G 
Sbjct: 331 GLCRMGKVDEARMLL----NKVPNPNVVLFNTLINGYVSRGRLDEAKAVM-HESMLSVGC 385

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P++ +Y+ LI GLC++G LV A  L  ++ I+  EP+++TY+ LID FCK G+L +  +
Sbjct: 386 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 445

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           + D M  +GL  +AV  + LI+ L     + DAL  F         P++F FN+L+ G C
Sbjct: 446 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC 505

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           ++ +  + + L+  M +  +  + IT+  LI     +G++  A+ L   ML RG   D I
Sbjct: 506 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 565

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+ +I  L +  NI  GL +F+ M   G+ P+    N+L+N L +  N+  AL+    +
Sbjct: 566 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 625

Query: 585 TDRGLEPDIITYNTIICGYCS 605
             RGL PDI+TYN++I G C 
Sbjct: 626 IHRGLTPDIVTYNSLINGLCK 646



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 212/425 (49%), Gaps = 10/425 (2%)

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++GL +   I  A  +  +++ RGF PN  T   ++  LC  G++  A  L + +    P
Sbjct: 294 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----P 349

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            PNVV F+TLIN +    +L++A   ++  M+ +   PD+  Y+ LI GL K G L    
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 409

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL+     +G + +V+ ++ ++D +   G +  A    D M   G   N + Y+ LI  L
Sbjct: 410 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 469

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+  ++ +A  +FG +  +  +P + T++SLI G CK  K  +   LY +M+  G+  + 
Sbjct: 470 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 529

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  + LI+     G M +AL+     +      +   +N L+   CR       + LF  
Sbjct: 530 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 589

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    + P+ I+  +LI G+   G++  A+     M+ RGLTPD++TY+++I+GL K   
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 649

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
               L++F  ++  G+ PD   YN L++   KE   D A  L  +  D G  P+ +T+  
Sbjct: 650 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 709

Query: 599 IICGY 603
           ++  +
Sbjct: 710 LVSNF 714



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 197/389 (50%), Gaps = 6/389 (1%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFH-MHRQVIQRGFVP 211
           LM  L     V +   L   +      ++  L+NG + +G ++ A   MH  ++  G  P
Sbjct: 328 LMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 387

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           +I T N ++  LC  G + +A  L + + + G +PNV+T++ LI+ FCKE +LE+A  + 
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 447

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           + M    L  + + Y+ LI  L K  ++++   +      +G K D+  F+S++     +
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 507

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
                A+  Y  ML  G + N I+Y+ LI    ++G + EA  L   +L R      +TY
Sbjct: 508 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 567

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
           + LI   C++G +  G +L+++M+ +GL P+ + C++LINGL     +  AL F    + 
Sbjct: 568 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 627

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             L P++  +N+L++G C+  RA + + LF  + +  I PD IT+  LI     +G    
Sbjct: 628 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 687

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           A LL  + +  G  P+ +T+  ++    K
Sbjct: 688 AHLLLSRGVDSGFIPNEVTWYILVSNFIK 716



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 182/349 (52%), Gaps = 12/349 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ LI  YV  G++DE+  +  + S + +   PD+     L+  L     +    +L   
Sbjct: 356 FNTLINGYVSRGRLDEAKAVM-HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 414

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ KG       Y  L++   ++G +E A ++  ++  +G   N V  N ++  LC + +
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A ++F  +   G KP++ TF++LI   CK  K E+A  LY  M+   ++ + I Y+ 
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    + G ++E  +L+   L RG  LD + ++ ++ A    G++ + +  ++ M++ G
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN IS +ILI GLC+ G +  A      ++ R L P ++TY+SLI+G CK+G+ ++  
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPN 452
           +L+D +   G+ PDA+  + LI+     G+  DA     + V    IPN
Sbjct: 655 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 703



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 162/334 (48%), Gaps = 10/334 (2%)

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P    Y++++D L      K    +    L +G+   V  F  VM A   + +V  A   
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
              M   G +PN I Y  LI  L + GR+ E   L  ++L+    P + T++  I G CK
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MG--DALRFFFQSVRMTLIPNLFIF 456
             ++ +   L D M+ RG  P++    +L++GL  MG  D  R     V     PN+ +F
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN---PNVVLF 356

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIK--PDVITHTVLIRGIASQGSLSSAILLFFQM 514
           NTL++G     R  D  K  M   M ++   PD+ T+  LI G+  +G L SA  L  +M
Sbjct: 357 NTLINGYVSRGR-LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
             +G  P+VITY+ +I    K   +    ++   M   G+A +   YN L++ L K+  +
Sbjct: 416 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
             AL +FG ++ +G +PDI T+N++I G C +N 
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 509



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 9/300 (3%)

Query: 112 GCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           GC+     Y+ LI+ + + G+++E+  +   MS  G+ L+      L+S L     V   
Sbjct: 419 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 478

Query: 167 YKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
             +   M  KG       +  L+ GL +    E A  +++ ++  G + N +T N ++  
Sbjct: 479 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 538

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
               G +  A  L + +L  G   + +T++ LI A C+   +EK   L+  MM   L P+
Sbjct: 539 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 598

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
            I  +ILI+GL + G ++   E L   + RGL  D+V ++S+++     G    A+  +D
Sbjct: 599 NISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFD 658

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           ++   G  P+ I+Y+ LI   C++G   +A  L  + +     P+ +T+  L+  F K G
Sbjct: 659 KLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 107/223 (47%), Gaps = 4/223 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI    ++ K +E++ ++  M   G+  +      L+   +   ++ +  KL   M 
Sbjct: 497 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 556

Query: 175 GKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G  + +   NGL+    R G IE    +   ++ +G  PN ++CN ++  LC  G I 
Sbjct: 557 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 616

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A      ++  G  P++VT+++LIN  CK  + ++A  L++ +    + PD I Y+ LI
Sbjct: 617 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 676

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
               K G   + + LL   +D G   + V +  ++  ++  GD
Sbjct: 677 SWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 242/466 (51%), Gaps = 8/466 (1%)

Query: 151 QRLMSCLVD---SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           +RL S +VD    +++  + ++ R+    G   +    + + R           +Q+   
Sbjct: 58  ERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   NI T N ++   C   +   A S+   ++ +G +P+  TF+TLIN  C E K+ KA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L + M+E    PD++ Y+ +++G+ ++G      ++L    +R +K DV  +S+++D+
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS 237

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G +  A+  +  M   G   +V++Y+ L++GLC+ G+  +   L   ++ R + P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++T++ L+D F K GKL++   LY  MI RG+ P+ +  + L++G      + +A     
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             VR    P++  F +L+ G C +KR  D +K+F  +    +  + +T+++L++G    G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A  LF +M+  G+ PDV+TY  ++ GL     +   L +F+ ++++ +   I +Y 
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            ++  + K   ++ A  LF  L  +G++P+++TY  +I G C   S
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 224/426 (52%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL  +G +  A  +  ++++ G  P++VT N I+  +C +G    A  +   +
Sbjct: 160 TFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKM 219

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                K +V T+ST+I++ C++  ++ A  L+  M    +   ++ Y+ L+ GL KAG+ 
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +G  LL   + R +  +V+ F+ ++D +V  G +  A + Y  M+  G  PN+I+Y+ L
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G C Q RL EA  +   ++  +  P ++T++SLI G+C   ++ DG  ++ N+ KRGL
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             +AV  S+L+ G         A   F + V   ++P++  +  L+DG C   +    ++
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  +    +   ++ +T +I G+   G +  A  LF  +  +G+ P+V+TY+ +I GL 
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  ++S    + + ME +G AP+   YN L+   +++ +L A+ KL  ++   G   D  
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579

Query: 595 TYNTII 600
           +   +I
Sbjct: 580 SIKMVI 585



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 216/397 (54%), Gaps = 9/397 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG+ R G    AF M R++ +R    ++ T + I+  LC +G I  A SLF  +
Sbjct: 195 TYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G K +VVT+++L+   CK  K      L   M+  ++VP++I +++L+D   K G+L
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E NEL    + RG+  +++ ++++MD Y     +  A    D M+     P++++++ L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKG C   R+ +   +F  +  R L  + +TYS L+ GFC+SGK++    L+  M+  G+
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434

Query: 420 KPDAVVCSLLINGL-----MGDALRFF--FQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            PD +   +L++GL     +  AL  F   Q  +M L   + ++ T+++G C+  +  D 
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL--GIVMYTTIIEGMCKGGKVEDA 492

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             LF  +    +KP+V+T+TV+I G+  +GSLS A +L  +M + G  P+  TY+ +I  
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
             +  +++    + + M+  G + D +   ++++ML+
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 217/409 (53%), Gaps = 5/409 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A+ +  +V++ G+ P+  T N ++  LC+ G++  A  L D ++  G +P++VT+++++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN 201

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C+      AF +   M E ++  D+  YS +ID L + G +     L      +G+K 
Sbjct: 202 GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            VV ++S++      G           M++   +PNVI++++L+    ++G+L EA  L+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            +++ R + P+++TY++L+DG+C   +L +  ++ D M++    PD V  + LI G    
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + D ++ F    +  L+ N   ++ L+ G C+  +     +LF  M  + + PDV+T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L+ G+   G L  A+ +F  + K  +   ++ Y+ II G+ KG  +    ++F  +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            GV P++  Y V+++ L K+ +L  A  L  ++ + G  P+  TYNT+I
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 211/434 (48%), Gaps = 13/434 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ LI      GK+ ++V +   M + G    PD+V    +++ +  S      + + R 
Sbjct: 161 FNTLINGLCLEGKVSKAVVLVDRMVENGC--QPDMVTYNSIVNGICRSGDTSLAFDMLRK 218

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +        Y  +++ L R G I+ A  + +++  +G   ++VT N +++ LC  G+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             + + L   ++     PNV+TF+ L++ F KE KL++A +LY  M+   + P++I Y+ 
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+DG     RL E N +L   +      D+V F+S++  Y  +  V   ++ +  +   G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            + N ++YSIL++G CQ G++  A  LF +++   + P ++TY  L+DG C +GKL    
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +++++ K  +    V+ + +I G+     + DA   F       + PN+  +  ++ G 
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+    ++   L   M      P+  T+  LIR     G L+++  L  +M   G + D 
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADA 578

Query: 524 ITYSAIIHGLFKGK 537
            +   +I  L  G+
Sbjct: 579 SSIKMVIDMLLSGE 592



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 172/350 (49%), Gaps = 18/350 (5%)

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV--- 329
           +M++  +  +L  + ++   L K G L+     LL  +   L      FSS+ +  V   
Sbjct: 1   MMIQRSITTNLKAFRMVQPHLLKTGTLRTD---LLCTISSFLSSCERDFSSITNGNVCFR 57

Query: 330 -----GIGDVGR--AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
                GI D+ +  A+  +  M+    LP ++ +S     + +  +         Q+ + 
Sbjct: 58  ERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            +  ++ T + +I+ FC+  K    +S+   ++K G +PD    + LINGL     +  A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           +    + V     P++  +N++++G CR    +    +   M   N+K DV T++ +I  
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS 237

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G + +AI LF +M  +G+   V+TY++++ GL K    + G  + K M    + P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +  +NVLL++ +KE  L  A +L+ ++  RG+ P+IITYNT++ GYC  N
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 153/572 (26%), Positives = 261/572 (45%), Gaps = 61/572 (10%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAI-QFFKWTHNCVSSPNIAQLIHVLLQSDMRD 81
           S+ H +D   +   +    L+   NP P+I QF K   + V S + + ++ +  Q +   
Sbjct: 43  SQFHENDDNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNG 102

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           + S     +VI                       S LI  + ++G+   S  + A +  M
Sbjct: 103 ITS----DLVI----------------------LSILINCFSQLGQNPLSFSVLAKILKM 136

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENA 197
           G   +   +  L+  L     + Q  +    +   GF +    Y  L+NGL + G    A
Sbjct: 137 GYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAA 196

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
             + R+V  +   PN+V  N I+  +C    +  A  L+  ++  G  P+VVT++ LI+ 
Sbjct: 197 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISG 256

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           FC   K++ A  L+N M+  ++ P++  ++IL+DG  K  RLKE   +L   + +G+K D
Sbjct: 257 FCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPD 316

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           V  ++S+MD Y  + +V +A   ++ +   G  PN+ SYSI+I G C+  ++ EA  LF 
Sbjct: 317 VFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFK 376

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
           ++    + P ++TY+SLIDG CK GK+     L D M  RG+  D +             
Sbjct: 377 EMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKIT------------ 424

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                             +N+++D  C+  +    + L   M    I+PD+ T+T L+ G
Sbjct: 425 ------------------YNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDG 466

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G L  A ++F  +L +G   DV  Y+A+I G          L +   ME NG  P+
Sbjct: 467 LCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPN 526

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
              Y +++  L  +   D A KL  ++  RGL
Sbjct: 527 AVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 231/433 (53%), Gaps = 7/433 (1%)

Query: 180 VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           +++F  ++  L++         +HRQ+   G   ++V  + ++      GQ   + S+  
Sbjct: 72  IFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLA 131

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L +G +PNV+T +TLI   C + ++ +A Q ++ ++ +    + + Y  LI+GL K G
Sbjct: 132 KILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVG 191

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           +     +LL     + ++ +VV++++++D+   +  V  A   Y  M++ G  P+V++Y+
Sbjct: 192 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYN 251

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G C  G++ +A  LF +++   + P++ T++ L+DGFCK  +L++  ++   M+K+
Sbjct: 252 ALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQ 311

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G+KPD    + L++       +  A   F    +  + PN+  ++ ++ G C++K+  + 
Sbjct: 312 GIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEA 371

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           + LF  M   NI PDV+T+  LI G+   G +S A+ L  +M  RG+  D ITY++I+  
Sbjct: 372 MNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDA 431

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K   +   + +   M+  G+ PDI  Y  L++ L K   L+ A  +F  L  +G   D
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491

Query: 593 IITYNTIICGYCS 605
           +  Y  +I G+CS
Sbjct: 492 VNIYTAMIQGFCS 504



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 237/467 (50%), Gaps = 11/467 (2%)

Query: 147 PDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHM 200
           P + Q  +++  LV SN       L R M   G      +   L+N   + G    +F +
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             ++++ G+ PN++T   ++K LC+ GQI  A    D ++ +G   N V++ TLIN  CK
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
             +   A QL   +    + P++++Y+ +ID + K   + E  +L    + +G+  DVV 
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           +++++  +  +G +  A   +++M+     PNV +++IL+ G C++ RL EA  +   ++
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
            + ++P + TY+SL+D +C   ++     +++ + +RG+ P+    S++I+G      + 
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +A+  F +     +IP++  +N+L+DG C+L + +  +KL   M    +  D IT+  ++
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
             +     +  AI L  +M   G+ PD+ TY+ ++ GL K   +     +F+ +   G  
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            D+ IY  ++         D +L L  ++ + G  P+ +TY  IIC 
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICS 536



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 199/378 (52%), Gaps = 5/378 (1%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
            SS   +L    PKP++  F  ++ +  K         L+  M    +  DL+I SILI+
Sbjct: 56  VSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILIN 115

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
              + G+      +L   L  G + +V+  ++++      G + +A+Q +D+++  GF  
Sbjct: 116 CFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHL 175

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N +SY  LI GLC+ G+   A  L  +V  + ++P+++ Y+++ID  CK   + + F LY
Sbjct: 176 NKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 235

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M+ +G+ PD V  + LI+G      M DA   F + +   + PN++ FN L+DG C+ 
Sbjct: 236 SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKE 295

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           +R  +   +  +M    IKPDV T+  L+        ++ A  +F  + +RG+ P++ +Y
Sbjct: 296 RRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSY 355

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           S +IHG  K K +   +++FK M  N + PD+  YN L++ L K   +  ALKL  ++ D
Sbjct: 356 SIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 415

Query: 587 RGLEPDIITYNTIICGYC 604
           RG+  D ITYN+I+   C
Sbjct: 416 RGVPHDKITYNSILDALC 433


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 228/437 (52%), Gaps = 14/437 (3%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++ L R G  + A+ +   +++ G V    +CN +L  L    +    ++L   +  + 
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMD 335

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD-----LVPDLIIYSILIDGLFKAGR 298
            +PNVVTF  LIN  CK  ++++A +++  M   +     + PD+I Y+ LIDGL K GR
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGR 395

Query: 299 LKEGNELL--LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
            +EG  L+  + +  R +  + V ++ ++D Y     +  A + +D+M   G  PNV++ 
Sbjct: 396 QEEGLGLVERMRSQPRCMP-NTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTL 454

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + L+ G+C+ GR+  A   F ++  + L+ + +TY++LI  FC    +     L+D M++
Sbjct: 455 NTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE 514

Query: 417 RGLKPDAVVCSLLINGL--MGDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATD 471
            G  PDA+V   LI+GL   G   R  F   +M      P++  FN L++G CR  +  +
Sbjct: 515 AGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDE 574

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             ++   M    IKPD +T+  LI   +  G  S+A  L  +M+K GL P V+TY A+IH
Sbjct: 575 AYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIH 634

Query: 532 GLFKGKNISVGLHMFKLMERNG-VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
                 N+   + +F+ M     V P+  IYN+L+N L ++  +D AL L   +  +G++
Sbjct: 635 AYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVK 694

Query: 591 PDIITYNTIICGYCSLN 607
           P+  T+N +  G    N
Sbjct: 695 PNTNTFNAMFKGLQEKN 711



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 241/496 (48%), Gaps = 25/496 (5%)

Query: 132 VEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YYKLCRAMRGKGFCVYEFLMNG 187
           +++F       I LS +    L+ C   +  V +    Y +LC + R     +   L++ 
Sbjct: 144 LDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTH--IRNILIDV 201

Query: 188 LLRKGVIENAFHMHRQVIQ--RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           L RKG +++A H+  +++Q    F PN  T + +   L    ++G A    +++ LV   
Sbjct: 202 LFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKF 261

Query: 246 ------PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 PN +  + LI+  C+  + ++A+ + + +M++  V +    + L+  L +A   
Sbjct: 262 AEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREF 321

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG---GFL--PNVI 354
           K  N LL    +  ++ +VV F  +++       V  A++ +++M  G   GFL  P+VI
Sbjct: 322 KRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVI 381

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           +Y+ LI GLC+ GR  E  GL  ++  + R  P+ +TY+ LIDG+CK+  +     L+D 
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQ 441

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M K G+ P+ V  + L++G+     +  A+ FF +     L  N   +  L+   C +  
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               ++LF  M      PD I +  LI G++  G L  A  +  +M + G +PD+++++ 
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+G  +   +     M K ME  G+ PD   YN L++   K  +   A +L  ++   G
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621

Query: 589 LEPDIITYNTIICGYC 604
           L P ++TY  +I  YC
Sbjct: 622 LVPTVVTYGALIHAYC 637



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 196/429 (45%), Gaps = 39/429 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMS---DMGIYLSPDLV--QRLMSCLVDSNSVGQYYKL 169
           +  LI +  +  ++DE++E+F  M+     G  + PD++    L+  L       +   L
Sbjct: 343 FGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGL 402

Query: 170 CRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
              MR +  C+     Y  L++G  +  +IE A  +  Q+ + G  PN+VT N ++  +C
Sbjct: 403 VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMC 462

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
            +G+I  A   F+ +   G K N VT++ LI AFC    +EKA +L++ M+E    PD I
Sbjct: 463 KHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAI 522

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           +Y  LI GL +AG+L   + +L    + G   D+V F+ +++ +     +  A +    M
Sbjct: 523 VYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM 582

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
            N G  P+ ++Y+ LI    + G    A  L  +++   L P+++TY +LI  +C +G L
Sbjct: 583 ENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNL 642

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
            +   ++ +M      P                             PN  I+N L++  C
Sbjct: 643 DEAMKIFRDMSSTSKVP-----------------------------PNTVIYNILINSLC 673

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           R  +    + L   M +  +KP+  T   + +G+  +  LS A  L  +M +    PD I
Sbjct: 674 RKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYI 733

Query: 525 TYSAIIHGL 533
           T   +   L
Sbjct: 734 TMEILTEWL 742



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 168/378 (44%), Gaps = 64/378 (16%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPD---LIIYSILIDGLFKAGRLKEGNELLLTAL 310
           LI  F +   ++++F +YN     +L P      I +ILID LF+ GR+ +   LL    
Sbjct: 165 LIRCFGRAQMVDESFLVYN-----ELCPSRRLTHIRNILIDVLFRKGRVDDALHLL---- 215

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN--GGFLPNVISYSILIKGLCQQ-- 366
                                          D ML     F PN  +  I+   L ++  
Sbjct: 216 -------------------------------DEMLQPKAEFPPNSNTGHIVFSALSKRDK 244

Query: 367 -GRLV---EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            GR V   E  GL  +     + P+ +  + LI   C+SG+    + +   ++K G   +
Sbjct: 245 VGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVME 304

Query: 423 AVVCSLLINGLMGDALRF------FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           A  C+ L+  L G A  F        +   M + PN+  F  L++  C+ +R  + +++F
Sbjct: 305 AASCNALLTAL-GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVF 363

Query: 477 MLM--GMYN---IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG-LTPDVITYSAII 530
             M  G  N   ++PDVIT+  LI G+   G     + L  +M  +    P+ +TY+ +I
Sbjct: 364 EKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLI 423

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G  K   I     +F  M ++GV P++   N L++ + K   ++ A++ F ++  +GL+
Sbjct: 424 DGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLK 483

Query: 591 PDIITYNTIICGYCSLNS 608
            + +TY  +I  +C++N+
Sbjct: 484 GNAVTYTALIRAFCNVNN 501



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/329 (20%), Positives = 136/329 (41%), Gaps = 40/329 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y +   I+ + E+F  M+  G+  +   +  L+  +     +    +    M+
Sbjct: 419 YNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           GKG       Y  L+        IE A  +  ++++ G  P+ +    ++  L   G++ 
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLD 538

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS +   +   G  P++V+F+ LIN FC++ KL++A+++   M    + PD + Y+ LI
Sbjct: 539 RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY--------- 341
               K G     + L+   +  GL   VV + +++ AY   G++  A++ +         
Sbjct: 599 SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV 658

Query: 342 ---------------------------DRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
                                      D M   G  PN  +++ + KGL ++  L +A  
Sbjct: 659 PPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFE 718

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           L  ++      P  +T   L +     G+
Sbjct: 719 LMDRMTEHACNPDYITMEILTEWLSAVGE 747



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 113/252 (44%), Gaps = 17/252 (6%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLV 158
           D + + GC      Y  LI    + GK+D +  + + M + G   SPD+V    L++   
Sbjct: 510 DEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG--FSPDIVSFNVLINGFC 567

Query: 159 DSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
             N + + Y++ + M   G       Y  L++   + G    A  + +++++ G VP +V
Sbjct: 568 RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVV 627

Query: 215 TCNKILKRLCINGQIGNASSLF-DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           T   ++   C+NG +  A  +F D+       PN V ++ LIN+ C++ +++ A  L + 
Sbjct: 628 TYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDD 687

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M    + P+   ++ +  GL +   L +  EL+    +     D +    + +    +G+
Sbjct: 688 MKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGE 747

Query: 334 VGRA---VQTYD 342
             +    VQ Y+
Sbjct: 748 TAKLKSFVQGYE 759



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 36/248 (14%)

Query: 394 LIDGFCKSGKLRDGFSLYDNMI--KRGLKPDAVVCSLLINGL-----MGDALR------F 440
           LID   + G++ D   L D M+  K    P++    ++ + L     +G A+        
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGL 257

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
             +     + PN      L+   CR     RA D +   M +G      +  +   L+  
Sbjct: 258 VSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVM---EAASCNALLTA 314

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM---ERNG- 553
           +           L  +M +  + P+V+T+  +I+ L K + +   L +F+ M   E NG 
Sbjct: 315 LGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGF 374

Query: 554 -VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNSCLI 611
            V PD+  YN L++ L K    +  L L  ++  +    P+ +TYN           CLI
Sbjct: 375 LVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYN-----------CLI 423

Query: 612 DGYFKSQI 619
           DGY K+ +
Sbjct: 424 DGYCKASM 431


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 167/643 (25%), Positives = 296/643 (46%), Gaps = 87/643 (13%)

Query: 51  AIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQFG--KTYNFFRLFR 105
           A  FFK      S   +     L H+L    +R +A  +   +V + G  ++ N      
Sbjct: 118 AYAFFKLAFKDDSEETVRSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMW 177

Query: 106 DSLGDFGCDYSFL---IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS 162
           +    +  D+S L   ++ +V+     E++EI + M ++G+  +P  +  L   L+ +  
Sbjct: 178 EGHRVYESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGD 237

Query: 163 VGQYYKLCRAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
            G  +KL   +  KG C   F  N L+    RKG       +   + +    P++ + N 
Sbjct: 238 CGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNI 297

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ--------- 269
           ++   C+ GQ   A  L ++++  G KP++ TF T+I+AFCKE  +E A +         
Sbjct: 298 VINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMG 357

Query: 270 ------LYNLMM-----------------EM---DLVPDLIIYSILIDGLFKAGRLKEGN 303
                 +YN+M+                 EM   D+VPD I ++ L+ G ++ G+ ++GN
Sbjct: 358 LSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGN 417

Query: 304 ELL----LTAL--------------------DRGLKL-----------DVVVFSSVMDAY 328
            LL    ++ L                    D  +KL            VV F+S++ AY
Sbjct: 418 RLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAY 477

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G   RA   Y  M+  G  P+  + S L+  L ++G L EA      ++ +    + 
Sbjct: 478 GNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTN 537

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQ 443
           + ++ L+DG+ + G +    SL++ M  RG+ PDAV  +  IN     GLM DA   F  
Sbjct: 538 MAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSD 597

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            +R   +PN F++N+L+ G C++ +  + +KL   M    + PD+ T  ++I G+  QG 
Sbjct: 598 MLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGR 657

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  AI  F  M + GL+PD++TY+ +I G  K  ++     +   M  +G  PD+  YN+
Sbjct: 658 MKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNI 717

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            ++       ++ A+ +  +L   G+ P+ +TYNT+I   C++
Sbjct: 718 RIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNV 760



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 237/500 (47%), Gaps = 10/500 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +I+ + + G ++ + + F  + DMG+  +  +   ++S  V +  + Q   L   MR K 
Sbjct: 333 IIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKD 392

Query: 178 FC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  +  L+ G  R G  E+   + R +   G + +   C+  +  LC  G+   A 
Sbjct: 393 IVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAM 452

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L + LL  G  P+VV F+++I A+      E+AF  Y +M++  L P     S L+  L
Sbjct: 453 KLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISL 512

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G L E    L   +D+G  +  + F+ ++D Y  IG V  A   ++ M   G  P+ 
Sbjct: 513 VRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDA 572

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++++  I GLC  G + +A  +F  +L +   P+   Y+SLI GFCK GKL +   L   
Sbjct: 573 VAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVRE 632

Query: 414 MIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M KRGL PD      ++C L   G M  A+  F    RM L P++  +NTL+DG C+   
Sbjct: 633 MNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFD 692

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 L M M     +PD+ T+ + I G  +   ++ A+++  +++  G+ P+ +TY+ 
Sbjct: 693 VGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNT 752

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+ +         +   KL+ +    P+    NVLL+   K+   + A+    +L++  
Sbjct: 753 MINAVCNVILDHAMILTAKLL-KMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIH 811

Query: 589 LEPDIITYNTIICGYCSLNS 608
           L+ D  T+  +   Y +L  
Sbjct: 812 LDFDETTHKLMNRAYRALEE 831


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 162/606 (26%), Positives = 285/606 (47%), Gaps = 29/606 (4%)

Query: 10  TVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ 69
           T+W+   +   SE+ T +S++    A+ +   +   ++P   + FF+W     +  N   
Sbjct: 43  TLWQEALEIRFSETDTRVSEI----AHFVFDQI---HDPRLGLNFFEWASKQSTLSN--S 93

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDY-SFLIENYVRIGKI 128
           L   +  S ++ +A          F +  N     +       C+  SF+I  Y   G +
Sbjct: 94  LDGFVCSSLLKLLARFRV------FKEIENLLETMKSKELIPTCEALSFVISAYAGSGLV 147

Query: 129 DESVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF--- 183
            E++E++  + D+   + PD+     L++ LV    V    K+   M  +   V  +   
Sbjct: 148 KEALELYNTVIDVHNCV-PDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVC 206

Query: 184 -LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            +  GL ++G +E   H+  +   +G VPNIV  N ++   C NG I  A+ LF  L + 
Sbjct: 207 IVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVK 266

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P V T+  +INAFCK+ K E   +L   M E  L   L I++ +ID  FK G   E 
Sbjct: 267 GFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEA 326

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            + +   ++ G + D+  ++++++     G V  A +  +  +  G  PN  SY+ LI  
Sbjct: 327 ADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHA 386

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
             + G  V A  L  ++  R     L+ Y +L+ G   +G++    ++ D M++RG+ PD
Sbjct: 387 FSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPD 446

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
           A + ++L++GL        A +   + +   + P+ F+  TL+DG  R     +  KLF 
Sbjct: 447 ANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQ 506

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
           L     I   V+    +I+G    G ++ A+L F +M     +PD  TYS II G  K  
Sbjct: 507 LTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQN 566

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           ++   L MF LM +    P++  +  L+N   +  +L+ A K+F ++   G EP+++TY 
Sbjct: 567 DLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTY- 625

Query: 598 TIICGY 603
           TI+ GY
Sbjct: 626 TILIGY 631



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 218/427 (51%), Gaps = 7/427 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
           L+N L+  G +E A  ++ +++ R G V N   C  + K LC  G++     L +     
Sbjct: 173 LLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVC-IVTKGLCKEGKVEEGRHLIEKRWGK 231

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  PN+V ++TLI+ +CK   +E+A  L+  +     +P +  Y  +I+   K G+ +  
Sbjct: 232 GCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAV 291

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           ++LL+   +RGL + + +F+ ++DA    G    A      M+  G  P++ +Y+ LI G
Sbjct: 292 DKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLING 351

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C +G++ EA  L    + R L P+  +Y+ LI  F K+G+      L   M +RG   D
Sbjct: 352 SCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLD 411

Query: 423 AVVCSLLINGLM--GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            +    L++GL+  G+   AL    + +   ++P+  I+N LM G C+  R     +L +
Sbjct: 412 LIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLV 471

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M   N+ PD   +  L+ G    G+L  A  LF   ++RG+   V+  +A+I G  K  
Sbjct: 472 EMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYG 531

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            ++  L  FK M     +PD   Y+ +++  +K+ +L  AL++FG +  +  +P+++T+ 
Sbjct: 532 MMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFT 591

Query: 598 TIICGYC 604
           ++I G+C
Sbjct: 592 SLINGFC 598



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 172/395 (43%), Gaps = 23/395 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + + G+   + E+   MS+ G  L       L+  LV +  V     +   M 
Sbjct: 380 YTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMM 439

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G      +Y  LM+GL +KG    A  +  +++ +   P+      ++     +G + 
Sbjct: 440 ERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLD 499

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF + +  G   +VV  + +I  +CK   +  A   +  M      PD   YS +I
Sbjct: 500 EAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTII 559

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  K   L+    +    L +  K +VV F+S+++ +   GD+ RA + ++ M + GF 
Sbjct: 560 DGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFE 619

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV++Y+ILI   C++G+L +AC  F Q+LI +  P+  T++ L++G   +  +      
Sbjct: 620 PNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGI------ 673

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
                         + S   N      L FF   +       +  +N+++   C+ K   
Sbjct: 674 -------------AISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVK 720

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
             ++L   M      PD ++   L+ G+  +G L 
Sbjct: 721 PALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQ 755



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/351 (20%), Positives = 150/351 (42%), Gaps = 54/351 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+   V  G++D ++ +   M + GI    ++   LMS L          +L   M 
Sbjct: 415 YGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEML 474

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +      F    L++G +R G ++ A  + +  I+RG   ++V CN ++K  C  G + 
Sbjct: 475 DQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMN 534

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A   F  +      P+  T+ST+I+ + K+  L  A +++ LM++    P+++ ++ LI
Sbjct: 535 DALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLI 594

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G  + G L    ++       G + +VV ++ ++  +   G + +A   +++ML    +
Sbjct: 595 NGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCI 654

Query: 351 PNVISYSILIKGL----------------------------------------------C 364
           PN  +++ L+ GL                                              C
Sbjct: 655 PNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLC 714

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Q   +  A  L  +++ +   P  +++ +L+ G C  G+L+D    ++N+I
Sbjct: 715 QHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQD----WNNVI 761



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 21/251 (8%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCL 157
           F R+F          YS +I+ YV+   +  ++ +F  M  +     P++V    L++  
Sbjct: 540 FKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLM--LKKTCKPNVVTFTSLINGF 597

Query: 158 VDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
             +  + +  K+   MR  GF      Y  L+    ++G +  A     Q++    +PN 
Sbjct: 598 CRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPND 657

Query: 214 VTCNKILKRLCINGQIGNAS-----------SLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            T N ++  L  N  I  +S             F +++  G    +  +++++   C+  
Sbjct: 658 ATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHK 717

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVF 321
            ++ A QL++ MM     PD + +  L+ GL   GRL++ N ++     +R L++  V +
Sbjct: 718 MVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVIPCNFNERQLQI-AVKY 776

Query: 322 SSVMDAYVGIG 332
           S  +D ++  G
Sbjct: 777 SEKLDQFLSEG 787


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 161/597 (26%), Positives = 279/597 (46%), Gaps = 29/597 (4%)

Query: 24  KTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTH---NCVSSPNIAQLIHVLLQSDMR 80
           +TH  D +   ++       + ++P   ++FF W     NC +  N      +L     R
Sbjct: 20  ETHFLDTEIPASDIACHMFDQIHDPEMGLEFFHWASKQSNCGNYLNEFSCSSLLRLLARR 79

Query: 81  DVASHVFDKMVIQFGK----TYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESV-EIF 135
            + S V   + I   K    T   F L      D G      +E Y    KI   V ++F
Sbjct: 80  RLFSEVESLLKIMKSKDLMPTREAFSLVISVFADCGL-VDRALEFYRTFIKIHHCVPDVF 138

Query: 136 AYMSDMGIYLSPDLVQ---RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKG 192
           +  S + + +    V+   ++   +VD N     Y +C             ++ GL ++G
Sbjct: 139 SCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVC------------IMVKGLCKEG 186

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            +E+ + +  +   RG +PNIV  N ++   C  G    A+ LF  L + G  P V T+ 
Sbjct: 187 KVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYG 246

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
            +IN FCK+ K E   +L   M E  L   + IY+ +ID  FK G   E  + +   +  
Sbjct: 247 AIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKS 306

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G   D+  ++ ++      G+V +A Q  ++ +  G LPN +SY+ LI   C+QG  + A
Sbjct: 307 GCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRA 366

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             L  ++  R  +P L+TY++LI G   +G++    ++ + M+++G+ PDA + ++L++G
Sbjct: 367 LDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSG 426

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           L     +  A     + +   + P+ FI  TL+DG  R     +  KLF L     I P 
Sbjct: 427 LCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPG 486

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           V+ +  +I+G    G +  A+L F +M++   +PD  TYS II G  K  ++   L MF 
Sbjct: 487 VVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFG 546

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           LM +    P++  Y +L+N      +++ A K F Q+    L+P+++TY  +I  +C
Sbjct: 547 LMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFC 603



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 144/582 (24%), Positives = 275/582 (47%), Gaps = 42/582 (7%)

Query: 51  AIQFFKW---THNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLF 104
           A++F++     H+CV  P++     L++VL++    ++A  V+D+MV + G+  N+    
Sbjct: 120 ALEFYRTFIKIHHCV--PDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNY---- 173

Query: 105 RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVG 164
                        +++   + GK+++  ++       G   +      L+          
Sbjct: 174 ---------TVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTE 224

Query: 165 QYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           +   L + ++ KGF      Y  ++NG  +KG  E    +  ++ +RG   +I   N I+
Sbjct: 225 RANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNII 284

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
                +G    A+     ++  G  P++ T++ LI   C   ++ KA QL    ++  L+
Sbjct: 285 DAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLL 344

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+ + Y+ LI    K G      +LL+   +RG K D+V +++++   +  G+V  A+  
Sbjct: 345 PNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTV 404

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
            ++M+  G LP+   Y++L+ GLC++GRL  A  L  ++L + + P     ++L+DGF +
Sbjct: 405 RNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIR 464

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFI 455
            G   +   L++  I++G+ P  V  + +I G     +M DAL  F + ++    P+ F 
Sbjct: 465 HGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFT 524

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           ++T++DG  ++      +++F LM     KP+V+T+T+LI G    G ++ A   F QML
Sbjct: 525 YSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQML 584

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL- 574
              L P+V+TY+ +I    KG N++     F+ M      P+   YN L+N L    +  
Sbjct: 585 SLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFV 644

Query: 575 -----------DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
                         L+ FG +   G +    +YN+I+   C 
Sbjct: 645 ISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQ 686



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 236/511 (46%), Gaps = 56/511 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS------CLVDS-NSVGQYY 167
           Y  +I  + + GK +   ++   MS+ G+ +S  +   ++       C +++ ++VG   
Sbjct: 245 YGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGW-- 302

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            + ++        Y  L+ G    G +  A  +  Q I+RG +PN V+   ++   C  G
Sbjct: 303 -MIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQG 361

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A  L   +   G KP++VT++ LI+      +++ A  + N M+E  ++PD  IY+
Sbjct: 362 EYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYN 421

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           +L+ GL K GRL     LL   LD+ +  D  + ++++D ++  GD   A + ++  +  
Sbjct: 422 VLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEK 481

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P V+ Y+ +IKG C+ G + +A   F +++     P   TYS++IDG+ K   L   
Sbjct: 482 GIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGA 541

Query: 408 FSLYDNMIKRGLKPDAVVCSLLING--LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
             ++  M+K   KP+ V  +LLING  L GD                             
Sbjct: 542 LRMFGLMVKGACKPNVVTYTLLINGFCLSGD----------------------------- 572

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           + RA  T K  + +    +KP+V+T+T+LI       +L+ A   F QML     P+ +T
Sbjct: 573 INRAEKTFKQMLSL---RLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVT 629

Query: 526 YSAIIHGLFKGKNI------------SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           Y+ +++GL    +             S+ L  F +M  +G     A YN +L  L +   
Sbjct: 630 YNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKM 689

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  AL L  ++  +G  PD ++   ++ G C
Sbjct: 690 VKHALHLRDKMMSKGFLPDPVSLVALLHGLC 720



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 188/402 (46%), Gaps = 40/402 (9%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+V + ++L+N   K  K+E A ++Y+ M++ +   D     I++ GL K G++++G +L
Sbjct: 135 PDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKL 194

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           +     RG   ++V +++++D Y   GD  RA   +  +   GFLP V +Y  +I G C+
Sbjct: 195 IEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCK 254

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G+      L  ++  R L+ S+  Y+++ID   K G   +       MIK G  PD   
Sbjct: 255 KGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMAT 314

Query: 426 CSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            ++LI G      +  A +   Q+++  L+PN   +  L+   C+       + L + M 
Sbjct: 315 YNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMS 374

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
               KPD++T+  LI G+   G +  A+ +  +M+++G+ PD   Y+ ++ GL K   + 
Sbjct: 375 ERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLP 434

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII------ 594
               +   M    VAPD  I   L++  I+  + + A KLF    ++G++P ++      
Sbjct: 435 AAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMI 494

Query: 595 -----------------------------TYNTIICGYCSLN 607
                                        TY+TII GY  +N
Sbjct: 495 KGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMN 536



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 34/315 (10%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGI-------------YLSPDLVQRLMSCLVDSNSVG 164
           L++ ++R G  +E+ ++F    + GI             Y    +++  + C        
Sbjct: 458 LVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLC-------- 509

Query: 165 QYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
            + ++ + +       Y  +++G ++   +  A  M   +++    PN+VT   ++   C
Sbjct: 510 -FKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFC 568

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
           ++G I  A   F  +L +  KPNVVT++ LI  FCK   L KA   +  M+    +P+ +
Sbjct: 569 LSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDV 628

Query: 285 IYSILIDGLFK--------AGRLKEGNELLLTA----LDRGLKLDVVVFSSVMDAYVGIG 332
            Y+ L++GL              +  N L+L +    +  G       ++S++       
Sbjct: 629 TYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHK 688

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
            V  A+   D+M++ GFLP+ +S   L+ GLC +GR  +   +    L  R     + YS
Sbjct: 689 MVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYS 748

Query: 393 SLIDGFCKSGKLRDG 407
             +D F   G+  + 
Sbjct: 749 EKLDAFLSQGQTSEA 763



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/343 (20%), Positives = 143/343 (41%), Gaps = 51/343 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI   +  G++D ++ +   M + G+    ++   LMS L     +     L   M 
Sbjct: 385 YAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEML 444

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +      F    L++G +R G  E A  +    I++G  P +V  N ++K  C  G + 
Sbjct: 445 DQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMK 504

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A   F  ++     P+  T+ST+I+ + K   L  A +++ LM++    P+++ Y++LI
Sbjct: 505 DALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLI 564

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G   +G +    +     L   LK +VV ++ ++  +    ++ +A   +++ML    L
Sbjct: 565 NGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCL 624

Query: 351 PNVISYSILIKGL----------------------------------------------- 363
           PN ++Y+ L+ GL                                               
Sbjct: 625 PNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICL 684

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
           CQ   +  A  L  +++ +   P  ++  +L+ G C  G+ +D
Sbjct: 685 CQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQD 727



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 33/264 (12%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ-VLIRRLEPSLLTYSSLIDGFCKSG 402
           M +   +P   ++S++I      G +  A   +   + I    P + + +SL++   K G
Sbjct: 92  MKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHG 151

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           K+     +YD M+ R  + D     +++ GL                             
Sbjct: 152 KVEIACKVYDEMVDRNGEVDNYTVCIMVKGL----------------------------- 182

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+  +  D  KL          P+++ +  LI G   +G    A +LF ++  +G  P 
Sbjct: 183 -CKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPT 241

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE-CNLDAALKLF 581
           V TY AII+G  K     V   +   M   G+   I IYN +++   K  C ++AA    
Sbjct: 242 VKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAA-DTV 300

Query: 582 GQLTDRGLEPDIITYNTIICGYCS 605
           G +   G +PD+ TYN +I G CS
Sbjct: 301 GWMIKSGCDPDMATYNILITGSCS 324


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 215/408 (52%), Gaps = 5/408 (1%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           I+ A+ ++ ++++     +IVT N ++  LC  G+   A      + + G KPNVVT++T
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +IN +C   K E A +++  M + +L PD   Y+  I  L K  R++E + +L   L+ G
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L  + V +++++D     GD+ +A    D M+N G + +V +Y++LI  L  + R+ EA 
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
            +  ++  + +EP ++TY+  I+G+C+ G  +   SL+D M+++ ++P     + LI+  
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437

Query: 432 ---GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                M +A   F +S++  ++P++ +FN L+DG C         +L   M    + PD 
Sbjct: 438 GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T   L++G   +  +  A  L  +M +RG+ PD I+Y+ +I G  K  ++   L +F  
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
           M   G  P +  YN L+    K    D A +L  ++  +G+ PD  TY
Sbjct: 558 MLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 43/412 (10%)

Query: 235 LFDVLLLVGPKPNVVT---FSTLINAFCKEAKLEKAFQLYNLMMEMDLVP---------- 281
           +F+ L L   + NV T   F  L++A+C+  K ++A +  NLM E +++P          
Sbjct: 131 IFNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLS 190

Query: 282 -------------------------DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
                                     ++ ++I+I+ L + G+ K+  + +      G+K 
Sbjct: 191 LLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKP 250

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV +++V++ Y   G    A + +  M +    P+  +Y+  I  LC++ R+ EA G+ 
Sbjct: 251 NVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVL 310

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            ++L   L P+ +TY++LIDG C  G L   F+  D M+ RG+       +LLI+ L   
Sbjct: 311 CKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLE 370

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + +A     +     + P++  +N  ++G CR   A   + LF  M   NI+P V T+
Sbjct: 371 KRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETY 430

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           T LI     +  +S A   F + +K G+ PD+I ++A+I G     NI     + K M+ 
Sbjct: 431 TSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDN 490

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             V PD   +N L+    +E  ++ A KL  ++ +RG++PD I+YNT+I GY
Sbjct: 491 AKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGY 542



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 197/406 (48%), Gaps = 5/406 (1%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           +   +P   TCN +L  L    +I  A  +++ ++ +  K ++VTF+ +IN  C+E K +
Sbjct: 175 ENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWK 234

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           KA      M    + P+++ Y+ +I+G    G+ +  +++  T  D+ LK D   ++S +
Sbjct: 235 KAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFI 294

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
                   +  A     ++L  G +PN ++Y+ LI G C +G L +A     +++ R + 
Sbjct: 295 SRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIV 354

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
            S+ TY+ LI       ++ +   +   M ++G++PD V  ++ ING         AL  
Sbjct: 355 ASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSL 414

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F + V   + P +  + +L+D   +  R ++  + F       + PD+I    LI G   
Sbjct: 415 FDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCV 474

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G++  A  L  +M    + PD +T++ ++ G  + + +     +   M+  G+ PD   
Sbjct: 475 NGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHIS 534

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           YN L++   K  ++  AL++F ++   G +P ++TYN +I GY  +
Sbjct: 535 YNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKI 580



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 183/396 (46%), Gaps = 38/396 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD------LVQRLMSCLVDSNSVGQYYK 168
           Y+ +I  Y   GK + + +IF  M D    L PD       + RL        + G   K
Sbjct: 255 YNTVINGYCLRGKFEAASKIFKTMKDKN--LKPDCYTYNSFISRLCKERRIEEASGVLCK 312

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           L  +        Y  L++G   KG ++ AF    +++ RG V ++ T N ++  L +  +
Sbjct: 313 LLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKR 372

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  +   +   G +P+VVT++  IN +C+    +KA  L++ M+E ++ P +  Y+ 
Sbjct: 373 IEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTS 432

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID   K  R+ E  E    ++  G+  D+++F++++D +   G++ RA Q    M N  
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            +P+ ++++ L++G C++ ++ EA  L  ++  R ++P  ++Y++LI G+ K G ++D  
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            ++D M+  G                                P L  +N L+ G  ++  
Sbjct: 553 EVFDEMLSLGFD------------------------------PTLLTYNALIQGYSKIGE 582

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           A    +L   M    I PD  T+  +I  + +   L
Sbjct: 583 ADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDL 618



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 143/303 (47%), Gaps = 10/303 (3%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM---GIYLSPDLVQRLMSCLV 158
           +L    L      Y+ LI+     G +D++   FAY  +M   GI  S      L+  L 
Sbjct: 312 KLLESGLVPNAVTYNALIDGCCNKGDLDKA---FAYRDEMMNRGIVASVFTYNLLIHALF 368

Query: 159 DSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
               + +   + + MR KG       Y   +NG  R G  + A  +  +++++   P + 
Sbjct: 369 LEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVE 428

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T   ++       ++  A   F   +  G  P+++ F+ LI+  C    +++AFQL   M
Sbjct: 429 TYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEM 488

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
               +VPD + ++ L+ G  +  +++E  +LL    +RG+K D + +++++  Y   GD+
Sbjct: 489 DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDM 548

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A++ +D ML+ GF P +++Y+ LI+G  + G    A  L  ++  + + P   TY  +
Sbjct: 549 KDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYV 608

Query: 395 IDG 397
           I+ 
Sbjct: 609 IEA 611



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 13/279 (4%)

Query: 104 FRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS--- 155
           +RD + + G       Y+ LI       +I+E+ ++   M + G+   PD+V   +    
Sbjct: 344 YRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGV--EPDVVTYNIQING 401

Query: 156 ---CLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
              C     ++  + ++           Y  L++   ++  +  A    ++ I+ G +P+
Sbjct: 402 YCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPD 461

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           I+  N ++   C+NG I  A  L   +      P+ VTF+TL+  +C+E K+E+A +L +
Sbjct: 462 IIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLD 521

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M E  + PD I Y+ LI G  K G +K+  E+    L  G    ++ +++++  Y  IG
Sbjct: 522 EMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIG 581

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           +   A +    M + G  P+  +Y  +I+ +     LVE
Sbjct: 582 EADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 93/198 (46%), Gaps = 12/198 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVG----QYYKLC 170
           Y+ LI+ + +  ++ E+ E F      G+   PD++  + + L+D + V     + ++L 
Sbjct: 430 YTSLIDVFGKRNRMSEAEEKFKKSIKEGML--PDII--MFNALIDGHCVNGNIDRAFQLL 485

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           + M           +  LM G  R+  +E A  +  ++ +RG  P+ ++ N ++      
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKR 545

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G + +A  +FD +L +G  P ++T++ LI  + K  + + A +L   M    + PD   Y
Sbjct: 546 GDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605

Query: 287 SILIDGLFKAGRLKEGNE 304
             +I+ +     L E ++
Sbjct: 606 LYVIEAMKTNDDLVENDD 623


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 214/426 (50%), Gaps = 7/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  +++GL + G +  A          G   +I T   I+  L  N +I +A +L + +
Sbjct: 132 THNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKI 191

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P + T++ L+N  CK  +LE+A  L   +++    PD++ Y+ LIDGL K  R 
Sbjct: 192 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 251

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +L      RGL LD V +++++   +  G + +A   Y  M + G +P+V++ S +
Sbjct: 252 FEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 311

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+ GR+  A  +F  +  R L P+ + YS+LI G CK+ K+     +   M K   
Sbjct: 312 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 371

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD +  ++LI+GL   GD   A  FF + +     P+++ +N L+ G C+         
Sbjct: 372 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACG 431

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  M   +  P+V+T+  LI G+  +  L+ A L F  M +RG  PD   YS+++ GL 
Sbjct: 432 VFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLC 491

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +  G  +F  MER+GVA +      L+  L K   +D A+ LF  +   G+ P   
Sbjct: 492 KSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPY 549

Query: 595 TYNTII 600
            YN+II
Sbjct: 550 AYNSII 555



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 199/403 (49%), Gaps = 6/403 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           GF  ++ T N +L       +   A +L    L     P+V T++ LI  +C   + E+A
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 268 FQLYNLMME-MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           F +   M E   + P L  +++++ GL K+G++    +   T    G  +D+  +++++D
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                  +  AV   +++   G  P + +Y+ L+ GLC+ GRL EA  L  +++     P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
            ++TY+SLIDG  K  +  + + L+  M  RGL  D V  + LI GL+         SV 
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 447 MTL-----IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            T+     +P++   +T++DG C+  R    V++F  M    + P+ + ++ LI G+   
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
             +  A+ +  QM K   TPD ITY+ +I GL K  ++      F  M   G  PD+  Y
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N+L++   K  N DAA  +F  ++     P+++TY T+I G C
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLC 456



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 226/470 (48%), Gaps = 11/470 (2%)

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL----RKGVIENAFHM 200
           +S D V ++  CL D++   + ++ C +    GF       N LL    R      A ++
Sbjct: 23  ISTDAVVKIFQCLKDADLAWELFQ-CLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNL 81

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF-DVLLLVGPKPNVVTFSTLINAFC 259
            +  +   F+P++ T N ++   C+  +   A ++  ++    G  P++ T + +++  C
Sbjct: 82  LKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLC 141

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K  K+  A   +          D+  Y+ ++D L K  ++++   L+      G    + 
Sbjct: 142 KSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIA 201

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            ++++++    +G +  A+    ++++ G  P+V++Y+ LI GL ++ R  EA  LF ++
Sbjct: 202 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
            +R L    + Y++LI G  ++GK+    S+Y  M  +G  PD V  S +I+GL     +
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
           G A+R F       L PN  +++ L+ G C+ ++    +++   M      PD IT+ +L
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 381

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+   G + +A   F +ML+ G  PDV TY+ ++ G  K  N      +F  M  +  
Sbjct: 382 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHC 441

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +P++  Y  L++ L K   L  A   F  + +RG  PD   Y++++ G C
Sbjct: 442 SPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLC 491



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 182/355 (51%), Gaps = 11/355 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+    ++G+++E++++   + D G   +PD+V    L+  L       + YKL + 
Sbjct: 203 YNALLNGLCKMGRLEEAIDLLRKIVDNGC--TPDVVTYTSLIDGLGKEKRSFEAYKLFKE 260

Query: 173 MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G  +    Y  L+ GLL+ G I  A  +++ +  +G VP++VT + ++  LC  G+
Sbjct: 261 MALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR 320

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           IG A  +F  +   G  PN V +S LI+  CK  K++ A ++   M +    PD I Y+I
Sbjct: 321 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 380

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDGL K+G ++         L+ G K DV  ++ ++  +   G+   A   +D M +  
Sbjct: 381 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSH 440

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV++Y  LI GLC++ +L +A   F  +  R   P    YSSL+DG CKSGKL  G 
Sbjct: 441 CSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC 500

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG---DALRFFFQSVRMTLIPNLFIFNTLM 460
            L+D M + G+        L+ +       D     F ++R   +P+ + +N+++
Sbjct: 501 MLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSII 555



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 3/195 (1%)

Query: 415 IKRGLKPDAVVC--SLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           ++R +  DAVV     L +  +   L     S R     ++   N L+D   R KR  + 
Sbjct: 19  LRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREA 78

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDVITYSAIIH 531
             L          PDV T  VLI G         A  +  +M +  G+ P + T++ ++H
Sbjct: 79  GNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLH 138

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL K   +   +  F+    NG   DI  Y  +++ L K   +  A+ L  ++T  G  P
Sbjct: 139 GLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTP 198

Query: 592 DIITYNTIICGYCSL 606
            I TYN ++ G C +
Sbjct: 199 TIATYNALLNGLCKM 213


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 236/490 (48%), Gaps = 11/490 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE--- 182
           G+I +++E+   MS  G    P +   ++     S       ++  AM  KG C  +   
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-CTLDTGN 183

Query: 183 --FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
              ++N +  +G ++ A  + R++   G   +IV+ N +LK LC+  + G+   L D ++
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV 243

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            V   PN+VTF+TLI   C+    E+  ++   M E    PD+ +Y+ +IDG+ K G L+
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
             NE+L      GLK +VV +++V+           A +    M       + ++++IL+
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILV 363

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              CQ G +     L  Q+L     P ++TY+++I+GFCK G + +   L  +M   G K
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  ++++ GL       DA     Q ++    PN   FNTL++  C+       ++L
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M +    PD+I+++ +I G+   G    A+ L   M+ +G++P+ I YS+I   L +
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              ++  + MF  ++   +  D  +YN +++ L K    D A+  F  +   G  P+  T
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 596 YNTIICGYCS 605
           Y  +I G  S
Sbjct: 604 YTMLIKGLAS 613



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 179/397 (45%), Gaps = 5/397 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN  T   +++ LC  G+I +A  + D +   G  P    +  ++ A C+      + ++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M       D    +++++ + + G + E   LL      G + D+V +++V+     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
               G   +  D M+     PN+++++ LI  LC+ G       +  Q+      P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSV 445
           Y+++IDG CK G L     + + M   GLKP+ V  + ++ GL       +A     +  
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +     +   FN L+D  C+       ++L   M  +   PDVIT+T +I G   +G + 
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A++L   M   G  P+ ++Y+ ++ GL           +   M + G  P+   +N L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           N L K+  ++ A++L  Q+   G  PD+I+Y+T+I G
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 125/239 (52%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG  ++G+I+ A  + + +   G  PN V+   +LK LC  G+  +A  L   +
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PN VTF+TLIN  CK+  +E+A +L   M+     PDLI YS +IDGL KAG+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E  ELL   +++G+  + +++SS+  A    G V + +Q +D + +     + + Y+ +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           I  LC++     A   F  ++     P+  TY+ LI G    G  ++   L   +  RG
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 3/149 (2%)

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G CR   A        L     + P+  T   ++RG+ ++G ++ A+ +  +M 
Sbjct: 82  YNAMVAGYCR---AGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            +G  P    Y  I+    +       + + + M   G   D    N++LN + ++  +D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            A+ L  +L   G E DI++YN ++ G C
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLC 227



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 1/153 (0%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN + F  ++ G C   R  D +++   M      P    + V++      G   +++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
              M  +G T D    + +++ + +   +   + + + +   G   DI  YN +L  L  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
                   +L  ++      P+I+T+NT+I GY
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLI-GY 260


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 236/490 (48%), Gaps = 11/490 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE--- 182
           G+I +++E+   MS  G    P +   ++     S       ++  AM  KG C  +   
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-CTLDTGN 183

Query: 183 --FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
              ++N +  +G ++ A  + R++   G   +IV+ N +LK LC+  + G+   L D ++
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV 243

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            V   PN+VTF+TLI   C+    E+  ++   M E    PD+ +Y+ +IDG+ K G L+
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
             NE+L      GLK +VV +++V+           A +    M       + ++++IL+
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILV 363

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              CQ G +     L  Q+L     P ++TY+++I+GFCK G + +   L  +M   G K
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  ++++ GL       DA     Q ++    PN   FNTL++  C+       ++L
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M +    PD+I+++ +I G+   G    A+ L   M+ +G++P+ I YS+I   L +
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              ++  + MF  ++   +  D  +YN +++ L K    D A+  F  +   G  P+  T
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 596 YNTIICGYCS 605
           Y  +I G  S
Sbjct: 604 YTMLIKGLAS 613



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 179/397 (45%), Gaps = 5/397 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN  T   +++ LC  G+I +A  + D +   G  P    +  ++ A C+      + ++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M       D    +++++ + + G + E   LL      G + D+V +++V+     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
               G   +  D M+     PN+++++ LI  LC+ G       +  Q+      P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSV 445
           Y+++IDG CK G L     + + M   GLKP+ V  + ++ GL       +A     +  
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +     +   FN L+D  C+       ++L   M  +   PDVIT+T +I G   +G + 
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A++L   M   G  P+ ++Y+ ++ GL           +   M + G  P+   +N L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           N L K+  ++ A++L  Q+   G  PD+I+Y+T+I G
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 125/239 (52%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG  ++G+I+ A  + + +   G  PN V+   +LK LC  G+  +A  L   +
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PN VTF+TLIN  CK+  +E+A +L   M+     PDLI YS +IDGL KAG+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E  ELL   +++G+  + +++SS+  A    G V + +Q +D + +     + + Y+ +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           I  LC++     A   F  ++     P+  TY+ LI G    G  ++   L   +  RG
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 3/149 (2%)

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G CR   A        L     + P+  T   ++RG+ ++G ++ A+ +  +M 
Sbjct: 82  YNAMVAGYCR---AGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            +G  P    Y  I+    +       + + + M   G   D    N++LN + ++  +D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            A+ L  +L   G E DI++YN ++ G C
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLC 227



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 1/153 (0%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN + F  ++ G C   R  D +++   M      P    + V++      G   +++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
              M  +G T D    + +++ + +   +   + + + +   G   DI  YN +L  L  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
                   +L  ++      P+I+T+NT+I GY
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLI-GY 260


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 241/498 (48%), Gaps = 14/498 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ---RLMS-CLVDSNSVGQYYKLC 170
           Y+ +++  V     D++ +++  M   G+  SPDL     RL S CL     +    +L 
Sbjct: 88  YNAIMDALVDAAYHDQAHKVYVRMLAAGV--SPDLHTHTIRLRSFCLTARPHIA--LRLL 143

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           RA+  +G   Y  ++ GL   G   +A  +  Q++     PN+   NK+L  LC  G + 
Sbjct: 144 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVL 203

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   ++  G   N+ T++  I   C+  +L +A +L + M     VPD++ Y+ LI
Sbjct: 204 EAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAY-AVPDVVTYNTLI 262

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K    +E    L   +++G   D   +++++D Y  I  V  A +     +  GF+
Sbjct: 263 RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV 322

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y  LI GLC +G +  A  LF +   + ++P ++ Y+SL+ G C  G +     +
Sbjct: 323 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 382

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            + M + G  PD    +++INGL     + DA      ++    +P++F FNTL+DG C+
Sbjct: 383 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 442

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +    ++L   M  Y I PD IT+  ++ G+   G ++     F +M+ +G  P+ IT
Sbjct: 443 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 502

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ +I    +   +     +   M + G+ PD   +N L+    +  +L+ A  LF +L 
Sbjct: 503 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 562

Query: 586 DRGLEPDIITYNTIICGY 603
           ++G      T+NT+I  +
Sbjct: 563 EKGYSATADTFNTLIGAF 580



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 234/504 (46%), Gaps = 24/504 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   I  Y R G++ ++V+ F  M       +      +M  LVD+    Q +K+   M 
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMH----RQVIQRGFVPN-IVTCNKILKRLCINGQI 229
             G           LR   +    H+     R +  RG V    V C      L  +G  
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCG-----LYAHGHT 167

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A  LFD +L     PN+  F+ +++A CK   + +A  L   +++  +  +L  Y+I 
Sbjct: 168 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKL----DVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           I GL +AGRL E   L+      G++     DVV +++++           A+    RM+
Sbjct: 228 IRGLCEAGRLPEAVRLV-----DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 282

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           N G LP+  +Y+ +I G C+   + EA  L    + +   P  +TY SLI+G C  G + 
Sbjct: 283 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 342

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLM 460
               L++    +G+KPD VV + L+      GL+  AL+   +       P++  +N ++
Sbjct: 343 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 402

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +G C++   +D   +     M    PDV T   LI G   +  L SA+ L  +M + G+ 
Sbjct: 403 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 462

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD ITY+++++GL K   ++     F+ M   G  P+   YN+L+    +   ++ A K+
Sbjct: 463 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 522

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
             +++  GL PD +++NT+I G+C
Sbjct: 523 IVKMSQEGLHPDAVSFNTLIYGFC 546



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 232/493 (47%), Gaps = 30/493 (6%)

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           VIQ G + N F             Y+  I      G++ E+V +   +  M  Y  PD+V
Sbjct: 212 VIQRGMSINLFT------------YNIWIRGLCEAGRLPEAVRL---VDGMRAYAVPDVV 256

Query: 151 --QRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQ 203
               L+  L   +   +     R M  +G C+     Y  +++G  +  +++ A  + + 
Sbjct: 257 TYNTLIRGLCKKSMPQEAMHYLRRMMNQG-CLPDDFTYNTIIDGYCKISMVQEATELLKD 315

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
            + +GFVP+ VT   ++  LC  G +  A  LF+     G KP++V +++L+   C +  
Sbjct: 316 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 375

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +  A Q+ N M E    PD+  Y+I+I+GL K G + +   ++  A+ +G   DV  F++
Sbjct: 376 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 435

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D Y     +  A+Q  +RM   G  P+ I+Y+ ++ GLC+ G++ E    F +++++ 
Sbjct: 436 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 495

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDAL 438
             P+ +TY+ LI+ FC+S K+ +   +   M + GL PDAV  + LI     NG +  A 
Sbjct: 496 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 555

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F +            FNTL+             K+F  M     + D  T+ VLI G 
Sbjct: 556 LLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 615

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
               ++  A +   +M+K+G  P + T+  +I+ L     +   + +  +M + GV P++
Sbjct: 616 CKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675

Query: 559 AIYNVLLNMLIKE 571
              + +LN   KE
Sbjct: 676 V--DTILNADKKE 686



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 209/433 (48%), Gaps = 10/433 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +M+ L+     + A  ++ +++  G  P++ T    L+  C+  +   A  L   L
Sbjct: 87  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 146

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
               P    V + T++           A QL++ M+   + P+L  ++ ++  L K G +
Sbjct: 147 ----PHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 202

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   LL   + RG+ +++  ++  +      G +  AV+  D M     +P+V++Y+ L
Sbjct: 203 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTL 261

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+GLC++    EA     +++ +   P   TY+++IDG+CK   +++   L  + + +G 
Sbjct: 262 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 321

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V    LINGL  +     AL  F ++    + P++ ++N+L+ G C        ++
Sbjct: 322 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 381

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M      PD+ T+ ++I G+   G++S A ++    + +G  PDV T++ +I G  
Sbjct: 382 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 441

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +   L + + M   G+APD   YN +LN L K   ++   + F ++  +G  P+ I
Sbjct: 442 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 501

Query: 595 TYNTIICGYCSLN 607
           TYN +I  +C  N
Sbjct: 502 TYNILIENFCRSN 514



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 171/380 (45%), Gaps = 35/380 (9%)

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++ +A   F+ + L    P    ++ +++A    A  ++A ++Y  M+   + PDL  +
Sbjct: 64  GRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTH 123

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +I +       R      LL     RG     V + +V+      G    A Q +D+ML+
Sbjct: 124 TIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLH 179

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               PN+ +++ ++  LC++G ++EA  L G+V+ R +  +L TY+  I G C++G+L +
Sbjct: 180 THVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPE 239

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
              L D M                               R   +P++  +NTL+ G C+ 
Sbjct: 240 AVRLVDGM-------------------------------RAYAVPDVVTYNTLIRGLCKK 268

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
               + +     M      PD  T+  +I G      +  A  L    + +G  PD +TY
Sbjct: 269 SMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 328

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            ++I+GL    ++   L +F   +  G+ PDI +YN L+  L  +  +  AL++  ++ +
Sbjct: 329 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 388

Query: 587 RGLEPDIITYNTIICGYCSL 606
            G  PDI TYN +I G C +
Sbjct: 389 EGCHPDIQTYNIVINGLCKM 408


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 235/472 (49%), Gaps = 18/472 (3%)

Query: 147 PDLVQ--RLMSCLVDSNSVGQYY----KLCRAMRGKGFC----VYEFLMNGLLRKGVIEN 196
           P ++Q  +L+S +V    +GQYY     L + M   G          L++       ++ 
Sbjct: 92  PCIIQFTKLLSAIV---KMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDL 148

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +  ++I+ G  P+ VT N ++  LC  G+   A   FD     G +P V T++T+IN
Sbjct: 149 AFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIIN 208

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK  +   A  L+  M E    P+++ Y+ILID L K   + E  ++      + +  
Sbjct: 209 GLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISP 268

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D+  ++S++           A    + M +   +PN+ ++++L+  +C++G++ EA G+F
Sbjct: 269 DIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVF 328

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
             +    +EP ++TYSSL+ G+    ++ +   L+D MI +G KPDA   ++LI G    
Sbjct: 329 KTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + +A + F + +   L P+   +NTL+ G C+L R  +   LF  M      PD+ T+
Sbjct: 389 KRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTY 448

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           ++L+ G   +G L  A  LF  M    L PD+  Y+ +I  + K  N+     +F  +  
Sbjct: 449 SMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFV 508

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            G+ P++ IY  ++N L KE  LD AL+ F  +   G  PD  +YN II G+
Sbjct: 509 QGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGF 560



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 236/480 (49%), Gaps = 38/480 (7%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAM 173
           S LI+ +  + ++D +  +F+ M  +G  L PD V    L++ L       Q  +     
Sbjct: 134 SILIDCFSHLQRVDLAFSVFSKMIKLG--LQPDAVTFNTLINGLCKVGKFAQAVEFFDDF 191

Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G       Y  ++NGL + G    A  + +++ + G  PN+VT N ++  LC +  +
Sbjct: 192 EASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLV 251

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  +F  +      P++ T+++LI   C   + ++A  L N M  ++++P++  +++L
Sbjct: 252 NEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVL 311

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           +D + K G++ E   +  T  + G++ DVV +SS+M  Y    ++  A + +D M+  G 
Sbjct: 312 VDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGC 371

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+  SY+ILIKG C+  R+ EA  LF +++ + L P  + Y++LI G C+ G+LR+   
Sbjct: 372 KPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQD 431

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           L+ NM   G  PD                              LF ++ L+DG C+    
Sbjct: 432 LFKNMHSNGNLPD------------------------------LFTYSMLLDGFCKEGYL 461

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
               +LF +M    +KPD+  + +LI  +   G+L  A  LF ++  +GL P+V  Y+ I
Sbjct: 462 GKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTI 521

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I+ L K   +   L  F+ ME +G  PD   YNV++   ++  +   A +L G++ DRG 
Sbjct: 522 INNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 211/419 (50%), Gaps = 6/419 (1%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI-GNASSLFDVLLLVGPKPNVVTFS 252
           I++A      ++ R  +P I+   K+L  +   GQ  G   SL   + L G  P++ T S
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
            LI+ F    +++ AF +++ M+++ L PD + ++ LI+GL K G+  +  E        
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G +  V  ++++++    IG+   A   + +M   G  PNV++Y+ILI  LC+   + EA
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN- 431
             +F  +  +R+ P + TY+SLI G C   + ++  +L + M    + P+    ++L++ 
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314

Query: 432 ----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
               G + +A   F     M + P++  +++LM G        +  KLF  M     KPD
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
             ++ +LI+G      +  A  LF +M+ +GLTPD + Y+ +IHGL +   +     +FK
Sbjct: 375 AFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFK 434

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            M  NG  PD+  Y++LL+   KE  L  A +LF  +    L+PDI  YN +I   C  
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKF 493



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 219/434 (50%), Gaps = 8/434 (1%)

Query: 179 CVYEF--LMNGLLRKGVIENA-FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           C+ +F  L++ +++ G    A   + +Q+   G  P+I T + ++       ++  A S+
Sbjct: 93  CIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSV 152

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F  ++ +G +P+ VTF+TLIN  CK  K  +A + ++        P +  Y+ +I+GL K
Sbjct: 153 FSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCK 212

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G       L     + G + +VV ++ ++D+      V  A+  +  M      P++ +
Sbjct: 213 IGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFT 272

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI+GLC   R  EA  L  ++    + P++ T++ L+D  CK GK+ +   ++  M 
Sbjct: 273 YNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMT 332

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G++PD V  S L+ G      + +A + F   +     P+ F +N L+ G C+ KR  
Sbjct: 333 EMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRID 392

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  +LF  M    + PD + +  LI G+   G L  A  LF  M   G  PD+ TYS ++
Sbjct: 393 EAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLL 452

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G  K   +     +F++M+   + PDIA+YN+L++ + K  NL  A KLF +L  +GL 
Sbjct: 453 DGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLL 512

Query: 591 PDIITYNTIICGYC 604
           P++  Y TII   C
Sbjct: 513 PNVQIYTTIINNLC 526



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 207/435 (47%), Gaps = 9/435 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG----IYLSPDLVQRLMS 155
           F ++ +  L      ++ LI    ++GK  ++VE F      G    +Y    ++  L  
Sbjct: 153 FSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCK 212

Query: 156 CLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
               + + G + K+  A        Y  L++ L +  ++  A  +   +  +   P+I T
Sbjct: 213 IGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFT 272

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N +++ LC   +   AS+L + +  +   PN+ TF+ L++A CKE K+ +A  ++  M 
Sbjct: 273 YNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMT 332

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           EM + PD++ YS L+ G      + E  +L    + +G K D   ++ ++  Y     + 
Sbjct: 333 EMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRID 392

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A Q ++ M++ G  P+ ++Y+ LI GLCQ GRL EA  LF  +      P L TYS L+
Sbjct: 393 EAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLL 452

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLI 450
           DGFCK G L   F L+  M    LKPD  + ++LI+     G + DA + F +     L+
Sbjct: 453 DGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLL 512

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN+ I+ T+++  C+     + ++ F  M      PD  ++ V+IRG       S A  L
Sbjct: 513 PNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQL 572

Query: 511 FFQMLKRGLTPDVIT 525
             +M  RG   +  T
Sbjct: 573 IGEMRDRGFVAEAGT 587


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 200/379 (52%), Gaps = 8/379 (2%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A   + +++  G+ PN+ T N ++ RLC  G++ +A  +FD +   G +P  V+F+TLIN
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
            +CK   LE+ F+L  +M E  + PD+  YS LIDGL K  +L++ N L     DRGL  
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           + V F+++++     G V  A++ Y +M   G   +++ Y+ LI GLC+ G   EA    
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
           G++  R L P   TY++L+DG CK G L     +   M+K G++ D V  + +I+GL   
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + DA R   + +R  L P+   +  +MDG C+        KL   M      P VIT+
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITY 515

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            VL+ G+  QG + +A +L   ML  G+ PD ITY+ ++ G  K   +    ++   M  
Sbjct: 516 NVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM-- 573

Query: 552 NGVAPDIAIYNVLLNMLIK 570
            G+  D A Y  LL+ L K
Sbjct: 574 -GLVSDYASYRSLLHELSK 591



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 210/430 (48%), Gaps = 40/430 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ LM+     G + +A    R   +         C  +L+R+        A   +  +
Sbjct: 164 VFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEI 223

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G  PNV TF+ L+N  CKE K++ A  +++ + +  L P  + ++ LI+G  K+G L
Sbjct: 224 LDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNL 283

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E           G +L +V                        M      P+V +YS L
Sbjct: 284 EE-----------GFRLKMV------------------------MEEFRVFPDVFTYSAL 308

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC++ +L +A  LF ++  R L P+ +T+++LI+G CK+G++     +Y  M  +GL
Sbjct: 309 IDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGL 368

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           K D V+ + LI+GL       +A +F  +  +  LIP+ F + TL+DG C+       ++
Sbjct: 369 KADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALE 428

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M    I+ D +  T +I G+   G +  A     +ML+ GL PD  TY+ ++ G  
Sbjct: 429 MRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFC 488

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  ++ +G  + K M+ +G  P +  YNVL+N L K+  +  A  L   + + G+ PD I
Sbjct: 489 KKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDI 548

Query: 595 TYNTIICGYC 604
           TYN ++ G+C
Sbjct: 549 TYNILLQGHC 558



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 171/358 (47%), Gaps = 37/358 (10%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +  L+NG  + G +E  F +   + +    P++ T + ++  LC   Q+ +A+ LF  + 
Sbjct: 270 FNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMC 329

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  PN VTF+TLIN  CK  +++ A ++Y  M    L  DL++Y+ LIDGL K G  +
Sbjct: 330 DRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFR 389

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  + +     RGL  D   +++++D     GD+  A++    M+  G   + ++++ +I
Sbjct: 390 EARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAII 449

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC+ G++V+A     ++L   L+P   TY+ ++DGFCK G ++ GF L   M   G  
Sbjct: 450 SGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHI 509

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           P  +                               +N LM+G C+  +  +   L   M 
Sbjct: 510 PGVIT------------------------------YNVLMNGLCKQGQVKNADMLLNAML 539

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR--GLTPDVITYSAIIHGLFKG 536
              + PD IT+ +L++G    G L       FQ +K   GL  D  +Y +++H L K 
Sbjct: 540 NLGVVPDDITYNILLQGHCKHGKLGD-----FQNVKTEMGLVSDYASYRSLLHELSKA 592



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 205/440 (46%), Gaps = 43/440 (9%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
           +K H   + FN    +L  +IK ++P  A++F+    +    PN+    +VL+    ++ 
Sbjct: 188 TKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTF-NVLMNRLCKE- 245

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
              V D  +I       F  + +  L      ++ LI  Y + G ++E   +   M +  
Sbjct: 246 -GKVKDAQLI-------FDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFR 297

Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHR 202
           ++  PD+                               Y  L++GL ++  +E+A H+ +
Sbjct: 298 VF--PDVF-----------------------------TYSALIDGLCKECQLEDANHLFK 326

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++  RG VPN VT   ++   C NG++  A  ++  +   G K ++V ++TLI+  CK  
Sbjct: 327 EMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGG 386

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
              +A +    M +  L+PD   Y+ L+DG  K G L+   E+    +  G++LD V F+
Sbjct: 387 YFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFT 446

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++      G +  A +T   ML  G  P+  +Y++++ G C++G +     L  ++   
Sbjct: 447 AIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSD 506

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
              P ++TY+ L++G CK G++++   L + M+  G+ PD +  ++L+ G         F
Sbjct: 507 GHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDF 566

Query: 443 QSVR--MTLIPNLFIFNTLM 460
           Q+V+  M L+ +   + +L+
Sbjct: 567 QNVKTEMGLVSDYASYRSLL 586



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 35/186 (18%)

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK---------------------------- 485
           F+F+ LM         +D ++ F L   +N+K                            
Sbjct: 163 FVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLE 222

Query: 486 -------PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
                  P+V T  VL+  +  +G +  A L+F ++ K GL P  ++++ +I+G  K  N
Sbjct: 223 ILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGN 282

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +  G  +  +ME   V PD+  Y+ L++ L KEC L+ A  LF ++ DRGL P+ +T+ T
Sbjct: 283 LEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTT 342

Query: 599 IICGYC 604
           +I G C
Sbjct: 343 LINGQC 348


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 275/595 (46%), Gaps = 37/595 (6%)

Query: 33  NQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDK 89
           N ANA L  LI  ++   A +      +   +P++    +LI  L +      A+ V  +
Sbjct: 44  NPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVL-R 102

Query: 90  MVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD- 148
              + G   + F             Y+ L+  Y R G++D +  + A M      ++PD 
Sbjct: 103 AAERSGTAVDVFA------------YNTLVAGYCRYGQLDAARRLIASMP-----VAPDA 145

Query: 149 -LVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQ 203
                ++  L D   VG+   L   M  +G       Y  L+  + +      A  +  +
Sbjct: 146 YTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDE 205

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +  +G  PNIVT N I+  +C  G++ +A    + L   G +P+ V+++T++   C   +
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
            E   +L+  MME + +P+ + + +L+    + G ++   ++L      G   +  + + 
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           V++     G V  A Q  + M + G  P+ ISY+ ++KGLC+  R  +A  L  +++ + 
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
             P+ +T+++ I   C+ G +     L + M + G + + V  + L+NG      +  AL
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F+    M   PN   + TL+ G C  +R     +L   M   +  P+V+T  VL+   
Sbjct: 446 ELFYS---MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
             +G +  AI L  QM++ G TP++ITY+ ++ G+ K  N    L +   +  NGV+PDI
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 562

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
             Y+ ++ +L +E  ++ A+K+F  + D G+ P  + YN I+   C    C  DG
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK--RCNTDG 615



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 235/497 (47%), Gaps = 12/497 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I      G++ E++ +   M   G   S      L+  +  S   GQ  ++   MR
Sbjct: 148 YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  ++NG+ R+G +++A     ++   GF P+ V+   +LK LC   +  
Sbjct: 208 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 267

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +   LF  ++     PN VTF  L+  FC+   +E+A Q+   M       +  + +I+I
Sbjct: 268 DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVI 327

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + + K GR+ +  + L      G   D + +++V+           A +    M+     
Sbjct: 328 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 387

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN ++++  I  LCQ+G + +A  L  Q+     E +++TY++L++GFC  G++     L
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 447

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + +M     KP+ +  + L+ GL     +  A     + ++    PN+  FN L+   C+
Sbjct: 448 FYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 504

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                + ++L   M  +   P++IT+  L+ GI    +   A+ L   ++  G++PD++T
Sbjct: 505 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVT 564

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           YS+II  L +   +   + MF +++  G+ P   IYN +L  L K CN D A+  F  + 
Sbjct: 565 YSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV 624

Query: 586 DRGLEPDIITYNTIICG 602
             G  P+ +TY T+I G
Sbjct: 625 SNGCMPNELTYITLIEG 641



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 160/328 (48%), Gaps = 13/328 (3%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           + +I    + G++D++   F ++++MG Y  SPD +    ++  L  +       +L + 
Sbjct: 324 NIVINTICKQGRVDDA---FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 173 MRGKGFCVYEFLMNG----LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  K     E   N     L +KG+IE A  +  Q+ + G   NIVT N ++   C+ G+
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  LF  +     KPN +T++TL+   C   +L+ A +L   M++ D  P+++ +++
Sbjct: 441 VDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+    + G + E  EL+   ++ G   +++ +++++D      +   A++    +++ G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++++YS +I  L ++ R+ EA  +F  V    + P  + Y+ ++   CK        
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD 436
             +  M+  G  P+ +    LI GL  +
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANE 645



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 156/338 (46%), Gaps = 13/338 (3%)

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           + + G+  + F+ F +++G +GC      Y+ +++   R  + +++ E+   M       
Sbjct: 330 ICKQGRVDDAFQ-FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMH 201
           +       +  L     + Q   L   M   G       Y  L+NG   +G +++A  + 
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
             +  +   PN +T   +L  LC   ++  A+ L   +L     PNVVTF+ L++ FC++
Sbjct: 449 YSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
             +++A +L   MME    P+LI Y+ L+DG+ K    +E  ELL   +  G+  D+V +
Sbjct: 506 GLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTY 565

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           SS++        V  A++ +  + + G  P  + Y+ ++  LC++     A   F  ++ 
Sbjct: 566 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 625

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
               P+ LTY +LI+G      L++   L   +  RG+
Sbjct: 626 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 218/424 (51%), Gaps = 8/424 (1%)

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK---RLCINGQIGNASSLFDVLLLVGPK 245
           ++ G   +AF + +++ +    PN++TCN +L    R   +  +  +   F+  + +G  
Sbjct: 146 VQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIV 205

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNV TF+ +I  +C E K + A +  N+M + +  PD + Y+ ++D L K GRL +  +L
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDL 265

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L+    RGL  +   ++ ++  Y  +G +  A    + M     LP+V +Y++LI GLC 
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +GR+ EA  L  ++   +L P +++Y++LI+G  +  K+ + F L + M ++G+KP+AV 
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385

Query: 426 CSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            ++++      G M DA     +       P+   +NTL++G C+     +  +    MG
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
             N+K D +T   ++R +  +  L  A  L     KRG   D ++Y  +I G FK  N+ 
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             L ++  M+   + P    YN ++  L +    + A+    +L + GL PD  TYNTI+
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565

Query: 601 CGYC 604
            GYC
Sbjct: 566 HGYC 569



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 203/399 (50%), Gaps = 5/399 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+ VT N IL  LC  G++G+A  L   +   G  PN  T++ L+  +CK   L++A  +
Sbjct: 241 PDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
             LM + +L+PD+  Y++LI+GL   GR++E  +L     +  L  DVV ++++++  + 
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
              +  A +  + M   G  PN ++++I++K  C++G++ +A     ++      P  +T
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           Y++LI+G+CK+G + + F   D M ++ +K D+V  + ++  L     + +A +    + 
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +     +   + TL+ G  +       +KL+  M    I P  +T+  +I G+   G   
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            AI    ++L+ GL PD  TY+ I+HG  +  ++         M  N   PD+   N+LL
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             L  E  L+ ALKLF     +G   D +TYNT+I   C
Sbjct: 601 RGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 209/428 (48%), Gaps = 5/428 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++ L +KG + +A  +   +  RG +PN  T N ++   C  G +  A+++ +++
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P+V T++ LIN  C E ++E+AF+L + M  + L+PD++ Y+ LI+G  +  ++
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +LL    ++G+K + V  + ++  Y   G +  A  T  +M   GF P+ ++Y+ L
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+ G + EA     ++  + ++   +T ++++   C+  KL + + L  +  KRG 
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             D V    LI G   D     AL+ + +     +IP+   +N ++ G C+  +    + 
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
               +    + PD  T+  ++ G   +G +  A     +M++    PDV T + ++ GL 
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +   L +F      G A D   YN L+  L KE  LD A  L  ++ ++ L PD  
Sbjct: 605 MEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664

Query: 595 TYNTIICG 602
           TYN II  
Sbjct: 665 TYNAIITA 672



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 224/488 (45%), Gaps = 32/488 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+  Y ++G + E+  +   M+   +         L++ L +   + + +KL   M 
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340

Query: 175 G----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L+NG L    I  AF +  ++ ++G  PN VT N ++K  C  G++ 
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +AS+    +   G  P+ VT++TLIN +CK   + +AF+  + M   ++  D +  + ++
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L +  +L+E  +LL +A  RG  +D V + +++  Y   G+V RA++ +D M     +
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEII 520

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y+ +I GLCQ G+  +A     ++L   L P   TY++++ G+C+ G +   F  
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++ M++   KPD   C++L+ GL     +  AL+ F   V      +   +NTL+   C+
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP---- 521
             R  D   L   M    + PD  T+  +I  +   G +  A     +ML++G  P    
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL 700

Query: 522 -------------------DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
                                + YS  I  L         + +F   ++ G+  D + Y 
Sbjct: 701 QLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYI 760

Query: 563 VLLNMLIK 570
            L++ LIK
Sbjct: 761 NLMDGLIK 768



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 180/366 (49%), Gaps = 8/366 (2%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK---AGRLKEG 302
           P+     T I A+ +  +   AFQ++  M  + L P+L+  + L++ L +   +  +   
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            E    A+  G+  +V  F+ V+  Y        AV+  + M      P+ ++Y+ ++  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC++GRL +A  L   +  R L P+  TY+ L+ G+CK G L++  ++ + M +  L PD
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
               ++LINGL     + +A +   +   + L+P++  +NTL++GC    + ++  KL  
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    +KP+ +TH ++++    +G +  A     +M + G +PD +TY+ +I+G  K  
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           N+         M R  +  D    N +L  L +E  L+ A KL      RG   D ++Y 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 598 TIICGY 603
           T+I GY
Sbjct: 493 TLIVGY 498



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/449 (23%), Positives = 190/449 (42%), Gaps = 77/449 (17%)

Query: 95  GKTYNFFRLFRDSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G+    F+L RD + +         Y+ LI   +   KI E+ ++   MS+ G+   P+ 
Sbjct: 327 GRIEEAFKL-RDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV--KPNA 383

Query: 150 VQR--LMSCLVDSNSVGQYYKLCRAMRGKGF---CV-YEFLMNGLLRKGVIENAFHMHRQ 203
           V    ++        +         M   GF   CV Y  L+NG  + G +  AF    +
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           + ++    + VT N IL+ LC   ++  A  L       G   + V++ TLI  + K+  
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +++A +L++ M E +++P  + Y+ +I GL + G+ ++    L   L+ GL  D   +++
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++  Y   GDV +A Q +++M+   F P+V + +IL++GLC +G L +A  LF   + + 
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDN------------------------------ 413
                +TY++LI   CK G+L D F+L                                 
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683

Query: 414 -----MIKRGLKPDAV----------------------------VCSLLINGLMGDALRF 440
                M+++G  P  V                            +  L   G   DA+R 
Sbjct: 684 EFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRI 743

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           F +S +  +  +   +  LMDG  + +++
Sbjct: 744 FGESKQKGITVDKSTYINLMDGLIKRRKS 772



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 124/231 (53%), Gaps = 8/231 (3%)

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM----G 435
           ++R   PS     + I  + +SG+    F ++  M +  L+P+ + C+ L+N L+     
Sbjct: 127 ILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSS 186

Query: 436 DALRF----FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
            ++ F    F  ++++ ++PN+  FN ++ G C   +  D V+   +MG YN  PD +T+
Sbjct: 187 HSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTY 246

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             ++  +  +G L  A  L   M  RGL P+  TY+ +++G  K   +    ++ +LM +
Sbjct: 247 NTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           N + PD+  YN+L+N L  E  ++ A KL  ++ +  L PD+++YNT+I G
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 19/205 (9%)

Query: 422 DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA----------TD 471
           D  + + + +G    A + F +  R+ L PNL   NTL++   R   +           D
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFND 198

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            +KL        I P+V T  ++I G   +     A+     M K   +PD +TY+ I+ 
Sbjct: 199 AIKL-------GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            L K   +     +   M+  G+ P+   YN+L+    K   L  A  +   +T   L P
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 592 DIITYNTIICGYCSLNSCLIDGYFK 616
           D+ TYN +I G C  N   I+  FK
Sbjct: 312 DVWTYNMLINGLC--NEGRIEEAFK 334



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 3/183 (1%)

Query: 427 SLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           SLL+  +  D       S+     P+  + +T +    +  +     ++F  M    ++P
Sbjct: 109 SLLLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRP 168

Query: 487 DVITHTVLIRGI---ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           +++T   L+  +    S  S+S +   F   +K G+ P+V T++ +I+G          +
Sbjct: 169 NLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAV 228

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
               +M +   +PD   YN +L+ L K+  L  A  L   +  RGL P+  TYN ++ GY
Sbjct: 229 EFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGY 288

Query: 604 CSL 606
           C +
Sbjct: 289 CKM 291


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 130/410 (31%), Positives = 214/410 (52%), Gaps = 32/410 (7%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +   +++RGF  N+   N +LK LC N + G A SL   +      P+V +++T+I 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
            FC+  +LEKA +L N M        L+ + ILID   KAG++ E    L      GL+ 
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D+VV++S++  +   G++ R    +D +L  G  P  I+Y+ LI+G C+ G+L EA  +F
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
             ++ R + P++ TY+ LIDG C  GK ++   L + MI++  +P+AV  +++IN L  D
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
            L                                D V++  LM     +PD IT+ +L+ 
Sbjct: 366 GL------------------------------VADAVEIVELMKKRRTRPDNITYNILLG 395

Query: 497 GIASQGSLSSAILLFFQMLKRG--LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           G+ ++G L  A  L + MLK      PDVI+Y+A+IHGL K   +   L ++ L+     
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A D    N+LLN  +K  +++ A++L+ Q++D  +  +  TY  +I G+C
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/594 (24%), Positives = 287/594 (48%), Gaps = 35/594 (5%)

Query: 28  SDLQFNQANAILANLIKTNNPTPAIQFFK---WTHNCVSSPNIAQLIHVLLQSDMRDVAS 84
           S L F   N ++A L+++ N   A  F++    T   ++  +++ L+   +Q      A 
Sbjct: 69  SSLAF-AGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAF 127

Query: 85  HVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
            V   ++++ G  +N +            +++ L++   R  +  ++V +   M      
Sbjct: 128 GVL-ALMLKRGFAFNVY------------NHNILLKGLCRNLECGKAVSLLREMRRNS-- 172

Query: 145 LSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL-----RKGVIENA 197
           L PD+     ++    +   + +  +L   M+G G C +  +  G+L     + G ++ A
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG-CSWSLVTWGILIDAFCKAGKMDEA 231

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
               +++   G   ++V    +++  C  G++    +LFD +L  G  P  +T++TLI  
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           FCK  +L++A +++  M+E  + P++  Y+ LIDGL   G+ KE  +LL   +++  + +
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
            V ++ +++     G V  AV+  + M      P+ I+Y+IL+ GLC +G L EA  L  
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411

Query: 378 QVLIRR--LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
            +L      +P +++Y++LI G CK  +L     +YD ++++    D V  ++L+N    
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLK 471

Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            G +  A+  + Q     ++ N   +  ++DG C+         L   M +  ++P V  
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  L+  +  +GSL  A  LF +M +    PDV++++ +I G  K  +I     +   M 
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           R G++PD+  Y+ L+N  +K   LD A+  F ++ D G EPD    ++++  YC
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-KYC 644



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 125/260 (48%), Gaps = 6/260 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQY---YKL 169
           Y+ L+      G +DE+ ++   M     Y  PD++    L+  L   N + Q    Y L
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449

Query: 170 CRAMRGKGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
                G G  V    L+N  L+ G +  A  + +Q+     V N  T   ++   C  G 
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L   + +   +P+V  ++ L+++ CKE  L++A++L+  M   +  PD++ ++I
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +IDG  KAG +K    LL+     GL  D+  +S +++ ++ +G +  A+  +D+M++ G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629

Query: 349 FLPNVISYSILIKGLCQQGR 368
           F P+      ++K    QG 
Sbjct: 630 FEPDAHICDSVLKYCISQGE 649


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 241/498 (48%), Gaps = 14/498 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ---RLMS-CLVDSNSVGQYYKLC 170
           Y+ +++  V     D++ +++  M   G+  SPDL     RL S CL     +    +L 
Sbjct: 89  YNAIMDALVDAAYHDQAHKVYVRMLAAGV--SPDLHTHTIRLRSFCLTARPHIA--LRLL 144

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           RA+  +G   Y  ++ GL   G   +A  +  Q++     PN+   NK+L  LC  G + 
Sbjct: 145 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVL 204

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   ++  G   N+ T++  I   C+  +L +A +L + M     VPD++ Y+ LI
Sbjct: 205 EAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAY-AVPDVVTYNTLI 263

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K    +E    L   +++G   D   +++++D Y  I  V  A +     +  GF+
Sbjct: 264 RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV 323

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y  LI GLC +G +  A  LF +   + ++P ++ Y+SL+ G C  G +     +
Sbjct: 324 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 383

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            + M + G  PD    +++INGL     + DA      ++    +P++F FNTL+DG C+
Sbjct: 384 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 443

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +    ++L   M  Y I PD IT+  ++ G+   G ++     F +M+ +G  P+ IT
Sbjct: 444 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 503

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ +I    +   +     +   M + G+ PD   +N L+    +  +L+ A  LF +L 
Sbjct: 504 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 563

Query: 586 DRGLEPDIITYNTIICGY 603
           ++G      T+NT+I  +
Sbjct: 564 EKGYSATADTFNTLIGAF 581



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 233/504 (46%), Gaps = 24/504 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   I  Y R G++ ++V+ F  M       +      +M  LVD+    Q +K+   M 
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN-IVTCNKILKRLCINGQI 229
             G       +   +           A  + R +  RG V    V C      L  +G  
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCG-----LYAHGHT 168

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A  LFD +L     PN+  F+ +++A CK   + +A  L   +++  +  +L  Y+I 
Sbjct: 169 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKL----DVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           I GL +AGRL E   L+      G++     DVV +++++           A+    RM+
Sbjct: 229 IRGLCEAGRLPEAVRLV-----DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 283

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           N G LP+  +Y+ +I G C+   + EA  L    + +   P  +TY SLI+G C  G + 
Sbjct: 284 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 343

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLM 460
               L++    +G+KPD VV + L+      GL+  AL+   +       P++  +N ++
Sbjct: 344 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 403

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +G C++   +D   +     M    PDV T   LI G   +  L SA+ L  +M + G+ 
Sbjct: 404 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 463

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD ITY+++++GL K   ++     F+ M   G  P+   YN+L+    +   ++ A K+
Sbjct: 464 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 523

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
             +++  GL PD +++NT+I G+C
Sbjct: 524 IVKMSQEGLHPDAVSFNTLIYGFC 547



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 232/493 (47%), Gaps = 30/493 (6%)

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           VIQ G + N F             Y+  I      G++ E+V +   +  M  Y  PD+V
Sbjct: 213 VIQRGMSINLFT------------YNIWIRGLCEAGRLPEAVRL---VDGMRAYAVPDVV 257

Query: 151 --QRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQ 203
               L+  L   +   +     R M  +G C+     Y  +++G  +  +++ A  + + 
Sbjct: 258 TYNTLIRGLCKKSMPQEAMHYLRRMMNQG-CLPDDFTYNTIIDGYCKISMVQEATELLKD 316

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
            + +GFVP+ VT   ++  LC  G +  A  LF+     G KP++V +++L+   C +  
Sbjct: 317 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 376

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +  A Q+ N M E    PD+  Y+I+I+GL K G + +   ++  A+ +G   DV  F++
Sbjct: 377 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 436

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D Y     +  A+Q  +RM   G  P+ I+Y+ ++ GLC+ G++ E    F +++++ 
Sbjct: 437 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 496

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDAL 438
             P+ +TY+ LI+ FC+S K+ +   +   M + GL PDAV  + LI     NG +  A 
Sbjct: 497 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 556

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F +            FNTL+             K+F  M     + D  T+ VLI G 
Sbjct: 557 LLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 616

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
               ++  A +   +M+K+G  P + T+  +I+ L     +   + +  +M + GV P++
Sbjct: 617 CKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 676

Query: 559 AIYNVLLNMLIKE 571
              + +LN   KE
Sbjct: 677 V--DTILNADKKE 687



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 209/433 (48%), Gaps = 10/433 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +M+ L+     + A  ++ +++  G  P++ T    L+  C+  +   A  L   L
Sbjct: 88  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 147

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
               P    V + T++           A QL++ M+   + P+L  ++ ++  L K G +
Sbjct: 148 ----PHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 203

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   LL   + RG+ +++  ++  +      G +  AV+  D M     +P+V++Y+ L
Sbjct: 204 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTL 262

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+GLC++    EA     +++ +   P   TY+++IDG+CK   +++   L  + + +G 
Sbjct: 263 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 322

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V    LINGL  +     AL  F ++    + P++ ++N+L+ G C        ++
Sbjct: 323 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 382

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M      PD+ T+ ++I G+   G++S A ++    + +G  PDV T++ +I G  
Sbjct: 383 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 442

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +   L + + M   G+APD   YN +LN L K   ++   + F ++  +G  P+ I
Sbjct: 443 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 502

Query: 595 TYNTIICGYCSLN 607
           TYN +I  +C  N
Sbjct: 503 TYNILIENFCRSN 515



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 171/380 (45%), Gaps = 35/380 (9%)

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++ +A   F+ + L    P    ++ +++A    A  ++A ++Y  M+   + PDL  +
Sbjct: 65  GRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTH 124

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +I +       R      LL     RG     V + +V+      G    A Q +D+ML+
Sbjct: 125 TIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLH 180

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               PN+ +++ ++  LC++G ++EA  L G+V+ R +  +L TY+  I G C++G+L +
Sbjct: 181 THVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPE 240

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
              L D M                               R   +P++  +NTL+ G C+ 
Sbjct: 241 AVRLVDGM-------------------------------RAYAVPDVVTYNTLIRGLCKK 269

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
               + +     M      PD  T+  +I G      +  A  L    + +G  PD +TY
Sbjct: 270 SMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 329

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            ++I+GL    ++   L +F   +  G+ PDI +YN L+  L  +  +  AL++  ++ +
Sbjct: 330 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 389

Query: 587 RGLEPDIITYNTIICGYCSL 606
            G  PDI TYN +I G C +
Sbjct: 390 EGCHPDIQTYNIVINGLCKM 409


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 252/498 (50%), Gaps = 14/498 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I    R G++ ++  +F  M   G+   PD+V    ++  L  + ++ +   + R 
Sbjct: 230 YNTVIHGLFREGEVSKACNLFHEMMQQGVV--PDVVTYTSIIDALCKARAMDKAELVLRQ 287

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   GF      Y  +++G    G  +    M R++  +G +PNIVTCN  +  LC +G+
Sbjct: 288 MISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGK 347

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A+  FD +   G KPN+VT+S L++ +  E        L+N M    +V D  +++I
Sbjct: 348 SKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNI 407

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +ID   K G + E   +     ++G+  D   +  V+ A+  +G +  A+  +++M+  G
Sbjct: 408 VIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL-EPSLLTYSSLIDGFCKSGKLRDG 407
             P  I Y  LI+G C  G LV+A  L  +++ R +  P+++ ++S+I+  CK G++ + 
Sbjct: 468 LKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEA 527

Query: 408 FSLYDNMIKRGLKPDAVVCSLLING--LMGDALRFFF---QSVRMTLIPNLFIFNTLMDG 462
             ++D +I  G +PD +  + LI+G  L+G   + F      +   + P++  +NTL+DG
Sbjct: 528 HDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDG 587

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            CR  R  D + LF  M    +KP  IT+ +++ G+ + G    A  +  +M++ G T D
Sbjct: 588 YCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           + T   I+ GL +       + MFK +    V  +IAI N +++ + K    + A +LF 
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFD 707

Query: 583 QLTDRGLEPDIITYNTII 600
            ++  GL P+  TY  +I
Sbjct: 708 SISATGLVPNASTYGVMI 725



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 216/462 (46%), Gaps = 41/462 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC--------------- 224
            Y  +++GL R+G +  A ++  +++Q+G VP++VT   I+  LC               
Sbjct: 229 TYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQM 288

Query: 225 --------------------INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
                               I+GQ    + +F  +   G  PN+VT ++ +++ CK  K 
Sbjct: 289 ISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKS 348

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           ++A + ++ M      P+L+ YS+L+ G    G   +   L  +    G+  D  VF+ V
Sbjct: 349 KEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIV 408

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +DAY   G +   +  + +M   G +P+  +Y I+I    + GRL +A   F Q++   L
Sbjct: 409 IDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL-KP-----DAVVCSLLINGLMGDAL 438
           +P  + Y SLI GFC  G L     L   M+ RG+ +P     ++++ SL   G + +A 
Sbjct: 469 KPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAH 528

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F   + +   P++  FN+L+DG   + +      +   M    I+PDV+++  LI G 
Sbjct: 529 DIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGY 588

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G +   ++LF +ML +G+ P  ITY  I+HGLF          M   M  +G   DI
Sbjct: 589 CRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +   ++L  L +    D A+ +F +L    ++ +I   NT+I
Sbjct: 649 STCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMI 690



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 226/469 (48%), Gaps = 14/469 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  Y   G+  E+  +F  M+  G  L P++V     MS L       +  +   +
Sbjct: 300 YNCMIHGYSISGQWKETAGMFREMTSQG--LMPNIVTCNSYMSSLCKHGKSKEAAEFFDS 357

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  L++G   +G   +  ++   +   G V +    N ++      G 
Sbjct: 358 MAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGM 417

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +     +F  +   G  P+  T+  +I AF +  +L  A   +N M+ M L P+ I+Y  
Sbjct: 418 MDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHS 477

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGL-KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           LI G    G L +  EL+   + RG+ + ++V F+S++++    G V  A   +D +++ 
Sbjct: 478 LIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHI 537

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+VI+++ LI G    G++ +A G+   ++   +EP +++Y++LIDG+C++G++ DG
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDG 597

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+  M+ +G+KP  +   ++++GL  D     A +   + +      ++     ++ G
Sbjct: 598 LILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            CR     + + +F  +G  N+K ++     +I  +        A  LF  +   GL P+
Sbjct: 658 LCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPN 717

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             TY  +I  L K  ++    +MF LME++G AP   + N ++ +L+++
Sbjct: 718 ASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEK 766



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 186/367 (50%), Gaps = 8/367 (2%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P V T++ L++  C+  +    F L+   ++  L  D+I+ SIL+  L+ A R  +   L
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 306 LLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML--NGGFLPNVISYSILIKG 362
           LL  +   G++ D + +++V+          RA+     M+  +GG  PNV++Y+ +I G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           L ++G + +AC LF +++ + + P ++TY+S+ID  CK+  +     +   MI  G +P+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + +I+G        +    F +     L+PN+   N+ M   C+  ++ +  + F 
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M     KP+++T++VL+ G A++G     + LF  M   G+  D   ++ +I    K  
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +   + +F  M+  GV PD   Y +++    +   L  A+  F Q+   GL+P+ I Y+
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476

Query: 598 TIICGYC 604
           ++I G+C
Sbjct: 477 SLIQGFC 483



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 136/282 (48%), Gaps = 17/282 (6%)

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP-----SLLT 390
           + +   +R LNG F     + S      C+ G  + A  LF ++      P     ++ T
Sbjct: 66  QTIPVPERSLNGFFTALARAPS---SAACRDGPSL-AVALFNRICREEARPRVALPTVCT 121

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSV 445
           Y+ L+D  C++ +   GF+L+   +K GLK D +V S+L+  L       D +      +
Sbjct: 122 YNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRM 181

Query: 446 -RMTLIPNLFIFNTLMDGCCRLKRATDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQG 502
             + + P+   +NT++   C   R+   + L   M+       P+V+T+  +I G+  +G
Sbjct: 182 PELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREG 241

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +S A  LF +M+++G+ PDV+TY++II  L K + +     + + M  NG  P+   YN
Sbjct: 242 EVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYN 301

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +++             +F ++T +GL P+I+T N+ +   C
Sbjct: 302 CMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLC 343



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/322 (21%), Positives = 143/322 (44%), Gaps = 42/322 (13%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
            C Y  +I  + R+G++ ++++ F  M  MG+     +   L+       ++ +  +L  
Sbjct: 437 ACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVS 496

Query: 172 AMRGKGF-----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            M  +G        +  ++N L ++G +  A  +   VI  G  P+++T N ++    + 
Sbjct: 497 EMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLV 556

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+I  A  + D ++  G +P+VV+++TLI+ +C+  +++    L+  M+   + P  I Y
Sbjct: 557 GKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITY 616

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRG--------------------------------- 313
            I++ GLF  GR     ++    ++ G                                 
Sbjct: 617 GIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGA 676

Query: 314 --LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
             +K ++ + ++++DA   +     A + +D +   G +PN  +Y ++IK L ++G + E
Sbjct: 677 MNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEE 736

Query: 372 ACGLFGQVLIRRLEPS--LLTY 391
           A  +F  +      PS  LL Y
Sbjct: 737 ADNMFSLMEKSGCAPSSRLLNY 758



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/377 (19%), Positives = 149/377 (39%), Gaps = 56/377 (14%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +A  +++ ++    P P I FF    N              L  + R V +H     VI 
Sbjct: 490 KAKELVSEMMSRGIPRPNIVFFNSIINS-------------LCKEGRVVEAHDIFDFVIH 536

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
            G+  +               ++ LI+ Y  +GKI+++  +   M   GI   PD+V   
Sbjct: 537 IGERPDVI------------TFNSLIDGYGLVGKIEKAFGVLDAMISAGI--EPDVVS-- 580

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
                                      Y  L++G  R G I++   +  +++ +G  P  
Sbjct: 581 ---------------------------YNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTT 613

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           +T   IL  L  +G+   A  +   ++  G   ++ T   ++   C+    ++A  ++  
Sbjct: 614 ITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKK 673

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           +  M++  ++ I + +ID ++K  + +E  EL  +    GL  +   +  ++   +  G 
Sbjct: 674 LGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGS 733

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           V  A   +  M   G  P+    + +I+ L ++G +V+A     +V  +R+     T S 
Sbjct: 734 VEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSL 793

Query: 394 LIDGFCKSGKLRDGFSL 410
           L+  F + GK  +   L
Sbjct: 794 LMALFSREGKYWEDVKL 810


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 242/516 (46%), Gaps = 37/516 (7%)

Query: 98  YNFFRLFRDSLG-DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
           + F    RD LG      + +LI++   + + DE+ E F  M + G+  + +    L+S 
Sbjct: 136 FEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSL 195

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
                    + KL R                       E A+ ++ ++ +     ++ T 
Sbjct: 196 ---------FLKLNRT----------------------EAAWVLYAEMFRLRIKSSVYTF 224

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++  LC  G++  A      +   G KPN+VT++T+++ +C   ++E A  +   M  
Sbjct: 225 NIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKR 284

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             + PD   Y  LI G+ K GRL+E +++    + +GL+   V++++++D +   G++  
Sbjct: 285 QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDM 344

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A    D ML  G  P + +Y+ LI  L  + R  EA  +  ++  + + P  +TY+ LI+
Sbjct: 345 ASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           G+C+    +  F L+D M+  G+KP     + L++ L     M +A   F +     ++P
Sbjct: 405 GYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLP 464

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           ++ +FN L+DG C         +L   M    + PD +T   +++G   +G +  A  LF
Sbjct: 465 DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M +RG+ PD I+++ +I G  +  +I     +   M   G  P +  YN L+  L K 
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
              D A +L  ++  +G+ PD  TY T+I G   +N
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 87/184 (47%)

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +A   F+      ++P +   N+L+    +L R      L+  M    IK  V T  ++I
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
             +  +G L  A      M   G+ P+++TY+ I+HG      +     +   M+R  + 
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
           PD   Y  L++ + K+  L+ A K+F ++  +GL P  + YNT+I G+C+  +  +   +
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 616 KSQI 619
           K ++
Sbjct: 349 KDEM 352


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 260/550 (47%), Gaps = 51/550 (9%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAY-MSDMGIYLSPDLVQR---LMS 155
           F RL R  L   G   +  ++      + DE++ +  + MS++G    PD       + S
Sbjct: 188 FARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCV--PDAFSYNTVIKS 245

Query: 156 CLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
               S S      L R  +G G       Y  +++GL  +G I  A ++  +++Q+G VP
Sbjct: 246 LCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVP 305

Query: 212 NIVTCNKILKRLCIN-----------------------------------GQIGNASSLF 236
           N+VT N I+  LC                                     G+   A+ +F
Sbjct: 306 NVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMF 365

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             +   G  P++VTF++L+++ CK  + ++A ++++ +      PD+I YSIL+ G    
Sbjct: 366 KEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATE 425

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GR  + N L  +  D G+  D   F+ +++A+   G +  A+  +  M   G  PNV++Y
Sbjct: 426 GRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTY 485

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + +I  LC+ GRL +A     Q++   L+P+ + Y SLI GFC  G L     L   M+ 
Sbjct: 486 ATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMD 545

Query: 417 RGL-KPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +G+ +P+     +++ SL   G + +A   F   + +   P++F FN+L+DG C + +  
Sbjct: 546 QGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMD 605

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
               +   M     +PDV+T++ LI G    G +   ++LF +ML + + P  +TYS ++
Sbjct: 606 KAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVL 665

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GLF+    S    MF  M  +G A  I+ Y ++L  L +    D A+ LF +L    L+
Sbjct: 666 DGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLK 725

Query: 591 PDIITYNTII 600
            +I   NT+I
Sbjct: 726 FEIAILNTMI 735



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/567 (24%), Positives = 257/567 (45%), Gaps = 51/567 (8%)

Query: 103 LFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           L R + GD GC      Y+ +I      G+I ++  +F  M   G+  +      ++  L
Sbjct: 259 LLRMTKGD-GCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHAL 317

Query: 158 VDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
             + ++ +   + R M           Y  +++G    G  + A  M +++ + G +P+I
Sbjct: 318 CKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDI 377

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL------------------- 254
           VT N ++  LC + +   A+ +F  +   G KP+++++S L                   
Sbjct: 378 VTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHS 437

Query: 255 ----------------INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
                           INA  K   +++A  ++  M    + P+++ Y+ +I  L + GR
Sbjct: 438 MTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGR 497

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF-LPNVISYS 357
           L +  E L   +  GLK + VV+ S++  +   GD+ +A +    M++ G   PN+  +S
Sbjct: 498 LADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFS 557

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I  LC +GR++ A  +F  V+     P + T++SLIDG+C  GK+   F + D M+  
Sbjct: 558 SIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSA 617

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G +PD V  S LING      + D L  F + +   + P    ++ ++DG  R  R +  
Sbjct: 618 GTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAA 677

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            K+F  M        + T+T++++G+        AI LF ++    L  ++   + +IH 
Sbjct: 678 KKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHA 737

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L+K K       +F  +  +G+ P+ + Y V++  L+KE +++ A  +F  +   G  P 
Sbjct: 738 LYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPS 797

Query: 593 IITYNTIICGYCSLNSCLIDGYFKSQI 619
               N II         +  GY+ S++
Sbjct: 798 SRLLNDIIRMLLQKGEIVKAGYYMSKV 824



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 193/386 (50%), Gaps = 12/386 (3%)

Query: 232 ASSLFDVLLLVGPKPNVV-----TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           A +LF+ +      P VV     T+  L++  C+  + +     +  ++   L  D I+ 
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT 203

Query: 287 SILIDGLFKAGRLKEGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           +  +  L  A R  E   +LL  +   G   D   +++V+ +  G      A+    RM 
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 346 NG-GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
            G G  P+V+SY+++I GL  +G + +AC LF +++ + + P+++TY+S++   CK+  +
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
                +   M    ++PD V  + +I+G        +A + F +  R  LIP++  FN+L
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           MD  C+ KR+ +  ++F  +     KPD+I++++L+ G A++G       LF  M   G+
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             D   ++ +I+   K   +   L +F  M   GV+P++  Y  ++  L +   L  A++
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCS 605
              Q+   GL+P+ + Y+++I G+C+
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFCT 529



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 175/348 (50%), Gaps = 12/348 (3%)

Query: 99  NFFRLFRDS--LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLM 154
           N F    D+  + D  C ++ LI  + + G +DE++ IF  M   G+  SP++V    ++
Sbjct: 433 NLFHSMTDNGIVADSHC-FNILINAHAKRGMMDEALLIFTEMRGQGV--SPNVVTYATVI 489

Query: 155 SCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
           + L     +    +    M   G      VY  L+ G    G +  A  +  +++ +G  
Sbjct: 490 AALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIP 549

Query: 211 -PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PNI   + I+  LC  G++ NA  +F++++ +G +P++ TF++LI+ +C   K++KAF 
Sbjct: 550 RPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFG 609

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           + + M+     PD++ YS LI+G FK+GR+ +G  L    L + +K   V +S V+D   
Sbjct: 610 VLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLF 669

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G    A + +  M+  G   ++ +Y+I+++GLC+     EA  LF ++    L+  + 
Sbjct: 670 RAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIA 729

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
             +++I    K  +  +   L+ ++   GL P+A    ++I  L+ + 
Sbjct: 730 ILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEG 777


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 243/523 (46%), Gaps = 38/523 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+  +++  ++     I + M + G   +P L   L+    ++      YKL   M 
Sbjct: 312 YRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMA 371

Query: 175 G----KGFCVYEFLMNG------LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           G     G+ VY   +        L    ++  A  ++ +++    V N V      + LC
Sbjct: 372 GCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLC 431

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   A  +  +++  G  P+  T+S +I   C+  K+EKAF L+  M  + ++PD+ 
Sbjct: 432 GMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVY 491

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ILID   K G +++           G    VV +++++ AY+    V +A   + RM
Sbjct: 492 TYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRM 551

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL----------------IRRLEPSL 388
           ++ G  PN I+YS L+ GLC+ G   +AC ++ +++                   + P++
Sbjct: 552 VDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNV 611

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +TY +LIDG CK+ K+ D   L D M   G +P+ ++   LI+G      + +A   FF+
Sbjct: 612 VTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFR 671

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
             +   +P +  + +L+D   + +R    +K+   M   +  P+V+T+T +I G+   G 
Sbjct: 672 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGE 731

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A+ L   M KRG  P+V+TY+++I GL K   + + L +F  M   G AP+   Y V
Sbjct: 732 CQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRV 791

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           L+N       LD A  L  ++           +   + GYCS+
Sbjct: 792 LINHCCAAGLLDEAHSLLSEMKQ-------TYWPKYVQGYCSV 827



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 138/663 (20%), Positives = 265/663 (39%), Gaps = 107/663 (16%)

Query: 38  ILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKT 97
           ++A L     P   ++FF W    V   +     + L +    D  +   ++++ + G+ 
Sbjct: 107 VVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREIGED 166

Query: 98  YNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
                  R+ LG      + ++    R G   +++E    + D G   S      L+  L
Sbjct: 167 D------REVLGRL---LNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVL 217

Query: 158 VDSNSVGQYYKLCRAMRGKGFCVYEF---------------------------------- 183
             +  +   +++ + M   GFC  +F                                  
Sbjct: 218 ATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLC 277

Query: 184 --LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +++GL+   + + A     ++     +PN+VT   +L       Q+G    +  +++ 
Sbjct: 278 TQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMN 337

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G  PN   F++L++++C       A++L N M      P  ++Y+I I  +     L  
Sbjct: 338 EGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPS 397

Query: 302 GNELLLTA------LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            + L L        L     L+ V  ++      G+G   +A Q    M+  GF+P+  +
Sbjct: 398 PDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTST 457

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN-- 413
           YS +I  LC+  ++ +A  LF ++    + P + TY+ LID FCK G +    S +D   
Sbjct: 458 YSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEME 517

Query: 414 ---------------------------------MIKRGLKPDAVVCSLLINGL--MGDAL 438
                                            M+  G  P+ +  S L++GL   G++ 
Sbjct: 518 SVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQ 577

Query: 439 R------------------FFFQSVRM-TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           +                  F+F+     ++ PN+  +  L+DG C+  +  D  +L  +M
Sbjct: 578 KACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVM 637

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                +P+ I +  LI G    G L +A  +FF+M K G  P V TY+++I  +FK + +
Sbjct: 638 SSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRL 697

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
            + + +   M  +   P++  Y  +++ L +      ALKL   +  RG  P+++TY ++
Sbjct: 698 DLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSL 757

Query: 600 ICG 602
           I G
Sbjct: 758 IDG 760



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 130/544 (23%), Positives = 241/544 (44%), Gaps = 85/544 (15%)

Query: 121 NYVR----IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
           N+ R    +GK D++ +I   M   G         ++++ L ++  V + + L + M+  
Sbjct: 425 NFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV 484

Query: 177 GFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G       Y  L++   + G+IE A     ++   G  P++VT   +L       Q+  A
Sbjct: 485 GVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQA 544

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD-------------- 278
           S +F  ++  G  PN +T+S L++  CK  + +KA ++Y  M+                 
Sbjct: 545 SDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHT 604

Query: 279 --LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             + P+++ Y  LIDGL KA ++ +  ELL      G + + +++ +++D +  +G +  
Sbjct: 605 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDN 664

Query: 337 AVQTYDRMLNGGFLP-----------------------------------NVISYSILIK 361
           A + + RM   G+LP                                   NV++Y+ +I 
Sbjct: 665 AQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMID 724

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GLC+ G   +A  L   +  R   P+++TY+SLIDG  KSGK+     L+  MI +G  P
Sbjct: 725 GLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAP 784

Query: 422 DAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL-----KRATD 471
           + V   +LIN     GL+ +A       ++ T  P        + G C +     K+   
Sbjct: 785 NYVTYRVLINHCCAAGLLDEA-HSLLSEMKQTYWPK------YVQGYCSVVQGFSKKFIA 837

Query: 472 TVKLFMLM---GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI---T 525
           ++ L   +   GM +I P    + +LI   +  G L  A+ L  +M++   + ++    T
Sbjct: 838 SLGLLEELESHGMVSIAP---VYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDT 894

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+++I  L     +     ++  + R GV P+++ +  L+  LIK    + AL+L   + 
Sbjct: 895 YTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMC 954

Query: 586 DRGL 589
           D G+
Sbjct: 955 DEGV 958



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/365 (20%), Positives = 132/365 (36%), Gaps = 53/365 (14%)

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++++    + G   +  E L    D G +     +++++      G +    +    M  
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY--SSLIDGFCKSGKL 404
            GF  +  +     + LC++GR  +A      V+I R +  L T   + +I G  ++   
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDAL-----VMIEREDFKLDTVLCTQMISGLMEASLF 290

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
            +  S    M      P+ V    L+ G      +G   R     +     PN  +FN+L
Sbjct: 291 DEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSL 350

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL--------- 510
           +   C  +      KL   M      P  + + + I  I S   L S  LL         
Sbjct: 351 VHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEE 410

Query: 511 ----------------------------FFQ----MLKRGLTPDVITYSAIIHGLFKGKN 538
                                        FQ    M+++G  PD  TYS +I  L +   
Sbjct: 411 MLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMK 470

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F+ M+  GV PD+  Y +L++   K   ++ A   F ++   G  P ++TY  
Sbjct: 471 VEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTA 530

Query: 599 IICGY 603
           ++  Y
Sbjct: 531 LLHAY 535



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/270 (20%), Positives = 101/270 (37%), Gaps = 39/270 (14%)

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           R +   DR + G  L      +++++  C+ G   +A    G++      PS  TY++L+
Sbjct: 161 REIGEDDREVLGRLL------NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALV 214

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
                +G++  GF +   M + G   D                               F 
Sbjct: 215 QVLATAGQMDMGFRVQKEMSELGFCTDK------------------------------FT 244

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
                   C+  R +D +   +++   + K D +  T +I G+        AI    +M 
Sbjct: 245 VGCFAQALCKEGRWSDAL---VMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMR 301

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
                P+V+TY  ++ G  K K +     +  +M   G  P+ +++N L++      +  
Sbjct: 302 CNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYP 361

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            A KL  ++   G  P  + YN  I   CS
Sbjct: 362 YAYKLLNRMAGCGCPPGYVVYNIFIGSICS 391


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 236/452 (52%), Gaps = 36/452 (7%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           D++ L+    ++ + D  + +F  M  +GI  SP     L +C +  N V +  + CRA 
Sbjct: 84  DFTRLLSVIAKMKRFDVVISLFEQMQILGI--SP----VLYTCNIVMNCVCRSSQPCRAS 137

Query: 174 RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
              G                         ++++ GF P++VT   +L   C   +I +A 
Sbjct: 138 CFLG-------------------------KMMKLGFEPDLVTFTSLLHGFCHWNRIEDAL 172

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           +LFD ++ +G +PNVVT++TLI+  CK   L  A +++N M +  + P+++ Y+ L+ GL
Sbjct: 173 ALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGL 232

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + GR  +   LL   + RG++ +V+ F++++DA+V +G +  A + Y  M+     P+V
Sbjct: 233 CEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDV 292

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            +Y+ LI GLC  GRL EA  +F  +      P+ +TY++LI GFCKS ++ DG  ++  
Sbjct: 293 FTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYE 352

Query: 414 MIKRGLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M ++GL  + +  ++LI G  L+G    A   F Q       P++  +N L+DG C    
Sbjct: 353 MSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGY 412

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               + +F  M    +  +++T+T++I+G+   G +  A  LF  +  +G+ P+VITY+ 
Sbjct: 413 VEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTT 472

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           +I G  +   I     +FK M+ +G  P+ ++
Sbjct: 473 MISGFCRRGFIHEADALFKKMKEDGFLPNESV 504



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 227/441 (51%), Gaps = 14/441 (3%)

Query: 177 GFCVY--------EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           GFC +        + L NGL      E A  +  +++    +P+IV   ++L  +    +
Sbjct: 39  GFCFWIRAFSNYRKILRNGLHNLQFNE-ALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKR 97

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
                SLF+ + ++G  P + T + ++N  C+ ++  +A      MM++   PDL+ ++ 
Sbjct: 98  FDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTS 157

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ G     R+++   L    +  G + +VV +++++        +  AV+ +++M + G
Sbjct: 158 LLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNG 217

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV++Y+ L+ GLC+ GR  +A  L   ++ R ++P+++T+++LID F K GK+ +  
Sbjct: 218 IRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAK 277

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            LY  MI+  + PD    + LINGL     + +A + F+        PN   + TL+ G 
Sbjct: 278 ELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGF 337

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+ KR  D  K+F  M    +  + IT+TVLI+G    G    A  +F QM  R   PD+
Sbjct: 338 CKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDI 397

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ ++ GL     +   L +FK M +  +  +I  Y +++  + K   ++ A  LF  
Sbjct: 398 RTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCS 457

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           L  +G++P++ITY T+I G+C
Sbjct: 458 LFSKGMKPNVITYTTMISGFC 478



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 217/434 (50%), Gaps = 20/434 (4%)

Query: 193 VIENAFHMHR---QVIQRGFVPNIVTC------------NKILKRLCINGQIGNASSLFD 237
           +++  FH+HR   Q+   G  P +  C             KIL+    N Q   A  LF 
Sbjct: 12  IVKKGFHLHRHRLQISNHGASPTLSLCGFCFWIRAFSNYRKILRNGLHNLQFNEALDLFT 71

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            ++   P P++V F+ L++   K  + +    L+  M  + + P L   +I+++ + ++ 
Sbjct: 72  RMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSS 131

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           +    +  L   +  G + D+V F+S++  +     +  A+  +D+++  GF PNV++Y+
Sbjct: 132 QPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYT 191

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI  LC+   L  A  +F Q+    + P+++TY+SL+ G C+ G+  D   L  +M+KR
Sbjct: 192 TLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKR 251

Query: 418 GLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G++P+ +  + LI+     G + +A   +   ++M++ P++F +  L++G C   R  + 
Sbjct: 252 GIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEA 311

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            ++F LM      P+ +T+T LI G      +     +F++M ++GL  + ITY+ +I G
Sbjct: 312 RQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQG 371

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
                   V   +F  M      PDI  YNVLL+ L     ++ AL +F  +  R ++ +
Sbjct: 372 YCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDIN 431

Query: 593 IITYNTIICGYCSL 606
           I+TY  II G C +
Sbjct: 432 IVTYTIIIQGMCKV 445



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 31/183 (16%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F+ + +  L      Y+ LI+ Y  +G+ D + E+F   + MG   +P  ++        
Sbjct: 350 FYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVF---NQMGSRRAPPDIR-------- 398

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
                                Y  L++GL   G +E A  + + + +R    NIVT   I
Sbjct: 399 --------------------TYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTII 438

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           ++ +C  G++ +A  LF  L   G KPNV+T++T+I+ FC+   + +A  L+  M E   
Sbjct: 439 IQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGF 498

Query: 280 VPD 282
           +P+
Sbjct: 499 LPN 501



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/105 (22%), Positives = 56/105 (53%)

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
             + A+ LF +M+     P ++ ++ ++  + K K   V + +F+ M+  G++P +   N
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +++N + +      A    G++   G EPD++T+ +++ G+C  N
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWN 166


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 250/504 (49%), Gaps = 11/504 (2%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS--CLV-DSNSVGQYYK 168
           GC Y+ L+ +  R G +DE  +++  M +  +  +     ++++  C V +     QY  
Sbjct: 184 GC-YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242

Query: 169 L-CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           +   A     F  Y  L+ G  ++  +++AF + +++  +G   N V    ++  LC+  
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +I  A  LF  +      P V T++ LI A C   +  +A  L   M E  + P++  Y+
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           +LID L    +L++  ELL   L++GL  +V+ ++++++ Y   G +  A+   + M + 
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR 422

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              PN  +Y+ LIKG C++  + +A G+  ++L R++ P ++TY+SLIDG C+SG     
Sbjct: 423 NLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           + L   M  RGL PD    + +I+ L     + +A   F    +  +IPN+ ++  L+DG
Sbjct: 482 YRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDG 541

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+  +  +   +   M   N  P+ +T   LI G+ + G L  A LL  +M+K  L P 
Sbjct: 542 YCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPT 601

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V T + +IH L K  +       F+ M  +G  PD   Y   +    +E  L  A  +  
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVA 661

Query: 583 QLTDRGLEPDIITYNTIICGYCSL 606
           ++ + G+ PD+ TY+++I GY  L
Sbjct: 662 KMKENGVSPDLFTYSSLIKGYGDL 685



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 138/621 (22%), Positives = 249/621 (40%), Gaps = 134/621 (21%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI       +IDE++++F  M D   Y +      L+  L  S    +   L + M 
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME 350

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++ L  +  +E A  +  Q++++G +PN++T N ++   C  G I 
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  + +++     +PN  T++ LI  +CK   + KA  + N M+E  ++PD++ Y+ LI
Sbjct: 411 DALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLI 469

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  ++G       LL    DRGL  D   ++S++D+      V  A   +D +     +
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVI 529

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD---- 406
           PNV+ Y+ LI G C+ G++ EA  +  ++L +   P+ LT+++LI G C  GKL++    
Sbjct: 530 PNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLL 589

Query: 407 -------------------------------GFSLYDNMIKRGLKPDAVVCSLLI----- 430
                                           +  +  M+  G KPDA   +  I     
Sbjct: 590 EEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCR 649

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC----------CRLKRATDT-------- 472
            G + DA     +     + P+LF +++L+ G             LKR  DT        
Sbjct: 650 EGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHT 709

Query: 473 -----------------------------------VKLFMLMGMYNIKPDVITHTVLIRG 497
                                              V+L   M  + + P+  ++  L+ G
Sbjct: 710 FLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLG 769

Query: 498 IASQGSLSSAILLFFQML-KRGLTPDVITYSAI--------------------------- 529
           I   G+L  A  +F  M  K G++P  + ++A+                           
Sbjct: 770 ICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLP 829

Query: 530 --------IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
                   I  L+K      G  +F+ + + G   D   + ++++ + K+  ++A  +LF
Sbjct: 830 QLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELF 889

Query: 582 GQLTDRGLEPDIITYNTIICG 602
             +   G      TY+ +I G
Sbjct: 890 NVMEKNGCTFSSQTYSLLIEG 910



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 5/257 (1%)

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ L+  L + G + E   ++ ++L  ++ P++ TY+ +++G+CK G + +       ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + GL PD    + LI G      +  A + F +        N   +  L+ G C  +R  
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + + LF+ M   +  P V T+TVLI+ +      S A+ L  +M ++G+ P++ TY+ +I
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
             L     +     +   M   G+ P++  YN L+N   K   ++ AL +   +  R L 
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425

Query: 591 PDIITYNTIICGYCSLN 607
           P+  TYN +I GYC  N
Sbjct: 426 PNTRTYNELIKGYCKRN 442


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 239/471 (50%), Gaps = 45/471 (9%)

Query: 176 KGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           + FC Y E L NGL      E A  +   +++   +P+I+   K+L  +    +     +
Sbjct: 35  RAFCNYREILRNGLHSLQFNE-ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVIN 93

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L D L ++G   ++ T + L+N FC+ ++   A      MM++   PD++ ++ LI+G  
Sbjct: 94  LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
              R++E   ++   ++ G+K DVV++++++D+    G V  A+  +D+M N G  P+V+
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ L+ GLC  GR  +A  L   +  R+++P ++T+++LID F K GK  D   LY+ M
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           I+  + P+    + LING      + +A + F+        P++  + +L++G C+ K+ 
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            D +K+F  M    +  + IT+T LI+G    G  + A  +F  M+ RG+ P++ TY+ +
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393

Query: 530 IHGLFKGKNISVGLHMFKLMER---NGVAPDIAIYNVLLNMLIKECNLDAAL-------- 578
           +H L     +   L +F+ M++   +GVAP+I  YNVLL+ L     L+ AL        
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453

Query: 579 ---------------------------KLFGQLTDRGLEPDIITYNTIICG 602
                                       LF  L  +G++P+++TY T+I G
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 256/508 (50%), Gaps = 13/508 (2%)

Query: 95  GKTYNFFRLFRDSLGDFG-CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
           GK  +F RL   S      C+Y  ++ N +   + +E++++F +M +     S     +L
Sbjct: 19  GKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKL 78

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           ++ +           LC  ++  G          LMN   +      A     ++++ GF
Sbjct: 79  LNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF 138

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P+IVT   ++   C+  ++  A S+ + ++ +G KP+VV ++T+I++ CK   +  A  
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L++ M    + PD+++Y+ L++GL  +GR ++ + LL     R +K DV+ F++++DA+V
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G    A + Y+ M+     PN+ +Y+ LI G C +G + EA  +F  +  +   P ++
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQS 444
            Y+SLI+GFCK  K+ D   ++  M ++GL  + +  + LI G   +G    A   F   
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378

Query: 445 VRMTLIPNLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
           V   + PN+  +N L+   C   ++K+A    +      M  + P++ T+ VL+ G+   
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G L  A+++F  M KR +   +ITY+ II G+ K   +   +++F  +   GV P++  Y
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGL 589
             +++ L +E     A  LF ++ + G+
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 200/385 (51%), Gaps = 8/385 (2%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           Q   A  LF  ++   P P+++ F+ L+N   K  K +    L + +  M +  DL   +
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           +L++   ++ +    +  L   +  G + D+V F+S+++ +     +  A+   ++M+  
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V+ Y+ +I  LC+ G +  A  LF Q+    + P ++ Y+SL++G C SG+ RD 
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDG 462
            SL   M KR +KPD +  + LI+  +      DA   + + +RM++ PN+F + +L++G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C      +  ++F LM      PDV+ +T LI G      +  A+ +F++M ++GLT +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            ITY+ +I G  +    +V   +F  M   GV P+I  YNVLL+ L     +  AL +F 
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411

Query: 583 QLTDR---GLEPDIITYNTIICGYC 604
            +  R   G+ P+I TYN ++ G C
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLC 436



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 212/454 (46%), Gaps = 47/454 (10%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           D++ L+    ++ K D  + +  ++  MG+         LM+C   S+           M
Sbjct: 74  DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              GF      +  L+NG      +E A  M  Q+++ G  P++V    I+  LC NG +
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193

Query: 230 GNASSLFDVL------------------------------LLVGP-----KPNVVTFSTL 254
             A SLFD +                              LL G      KP+V+TF+ L
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I+AF KE K   A +LYN M+ M + P++  Y+ LI+G    G + E  ++      +G 
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             DVV ++S+++ +     V  A++ +  M   G   N I+Y+ LI+G  Q G+   A  
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR---GLKPDAVVCSLLIN 431
           +F  ++ R + P++ TY+ L+   C +GK++    ++++M KR   G+ P+    ++L++
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           GL     +  AL  F    +  +   +  +  ++ G C+  +  + V LF  +    +KP
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +V+T+T +I G+  +G    A +LF +M + G++
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 427 SLLINGL----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            +L NGL      +AL  F   V    +P++  F  L++   ++K+    + L   + + 
Sbjct: 42  EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101

Query: 483 NIKPDVITHTVLIRGI--ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
            +  D+ T  +L+     +SQ  L+S+ L   +M+K G  PD++T++++I+G   G  + 
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFL--GKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             + M   M   G+ PD+ +Y  +++ L K  +++ AL LF Q+ + G+ PD++ Y +++
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 601 CGYCS 605
            G C+
Sbjct: 220 NGLCN 224


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 246/500 (49%), Gaps = 12/500 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ Y +   +++++ ++  M+     L PD+V    +M+ L  S  V +   + R 
Sbjct: 90  YTTLIDAYCKSQCLEDALYMYDEMTVKS--LVPDVVTYTCIMNGLCKSGKVEEAKSVFRE 147

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  L++ L ++G +  AF +  +++ RG   ++V    ++  L   G 
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGM 207

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             NA  +F VLL     PN VT+S LI+  CK   + K   L   M E  + P++I+YS 
Sbjct: 208 ANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS 267

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++DG  K G L E  +++   + R +  +V V+ +++D Y      G A+  +  M + G
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N       +  L + GR+ EA  LF  ++ R L P  + Y+S++DGF K+GK  D F
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           ++   M ++    D V  ++LINGL      ++  F     ++ L P+   FNT+++  C
Sbjct: 388 NIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYC 447

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +     + +KL   M  Y +KP+ IT  +L++ + + G +   + L   ML  G  P   
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           T+ A++    K +   V LHM   +   GV  D++ YN L++   +   +  A  +F  +
Sbjct: 508 THKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567

Query: 585 TDRGLEPDIITYNTIICGYC 604
             +G+  DIITYN +I GYC
Sbjct: 568 MGKGILADIITYNALIHGYC 587



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 163/640 (25%), Positives = 279/640 (43%), Gaps = 109/640 (17%)

Query: 64  SPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE 120
            PN+     LI    +S   + A +++D+M ++             SL      Y+ ++ 
Sbjct: 84  EPNVITYTTLIDAYCKSQCLEDALYMYDEMTVK-------------SLVPDVVTYTCIMN 130

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM--RGKGF 178
              + GK++E+  +F  M ++G+  +      L+  L    +V + + L   M  RG GF
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190

Query: 179 --CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
              VY  LM+GL + G+  NA  M + +++   VPN VT + ++   C  G +     L 
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             +      PNV+ +S++++ + K+  L +A  +   M++ +++P++ +Y  LIDG FKA
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 297 -----------------------------------GRLKEGNELLLTALDRGLKLDVVVF 321
                                              GR++E +EL    + RGL  D V +
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +S+MD +   G    A      M       +V++Y++LI GL + G+  E+      +  
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQ 429

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-------- 433
             L P   T++++I+ +CK G L +   L + M   GLKP+++ C++L+  L        
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 434 ----------MG------------DA----------LRFFFQSVRMTLIPNLFIFNTLMD 461
                     MG            DA          L    Q V M +  +L  +NTL+ 
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549

Query: 462 GCCRL---KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
             CRL   +RAT   K  M  G   I  D+IT+  LI G      L  A  +  QML  G
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKG---ILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           ++P+V TY+ ++ GL   + I     +   M+  G+ P+   Y++L++   K  N+   +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
           KL+ ++  +G  P   TYN +I       SC   G   SQ
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLI-------SCFAKGKKMSQ 699



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 199/378 (52%), Gaps = 16/378 (4%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           + +V  F+ LI+ +C+  ++ +A +L   M      PD++ Y+ L++G  K G L    +
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           L+       L+ +V+ +++++DAY     +  A+  YD M     +P+V++Y+ ++ GLC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + G++ EA  +F ++    + P+  +Y++LID   K G + + F L   M+ RG+  D V
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 425 VCSLLINGL----MGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           V + L++GL    M +     FQ +   +L+PN   ++ L+DG C+L        L   M
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              +I P+VI ++ ++ G   +G L+ A+ +  +M++R + P+V  Y  +I G FK    
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
            + L +FK M+  G+  +  + +  +N L +   ++ A +LF  +  RGL PD + Y + 
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS- 372

Query: 600 ICGYCSLNSCLIDGYFKS 617
                     ++DG+FK+
Sbjct: 373 ----------MMDGFFKA 380



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 171/312 (54%), Gaps = 22/312 (7%)

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++  V  F+ ++D Y   G++ RAV+  + M   G  P++++Y+ L+ G C+ G L  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L G++ +  LEP+++TY++LID +CKS  L D   +YD M  + L PD V  + ++NGL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP-- 486
                + +A   F +   + ++PN F + TL+D    L +  +  + F+L G   ++   
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDS---LFKEGNVAEAFVLQGRMVVRGIG 189

Query: 487 -DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
            DV+ +T L+ G+   G  ++A  +F  +L+  L P+ +TYSA+I G  K  +++ G  +
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            + ME   + P++ +Y+ +++   K+  L+ A+ +  ++  R + P++  Y T       
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGT------- 302

Query: 606 LNSCLIDGYFKS 617
               LIDGYFK+
Sbjct: 303 ----LIDGYFKA 310



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 127/551 (23%), Positives = 223/551 (40%), Gaps = 101/551 (18%)

Query: 65  PNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           PN+     LI    ++D R +A  +F +M  +  +  NF                  + N
Sbjct: 295 PNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFV-------------IDSFVNN 341

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGK--G 177
             R G+++E+ E+F  M   G  L PD V    +M     +      + + + M  K  G
Sbjct: 342 LKRSGRMEEADELFKDMMSRG--LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSG 399

Query: 178 FCV--YEFLMNGLLRKGVIE----------------------------------NAFHMH 201
           F V  Y  L+NGL + G  E                                  NA  + 
Sbjct: 400 FDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLL 459

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            ++   G  PN +TCN +++RLC  G+I     L + +L++G  P   T   +++A  K 
Sbjct: 460 NEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            + +    +++ ++ M +  DL  Y+ LI    + G ++    +    + +G+  D++ +
Sbjct: 520 RRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY 579

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++  Y     + +A   + +ML  G  PNV +Y+IL+ GL     + EA GL  Q+  
Sbjct: 580 NALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE 639

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           R L P+  TY  L+ G  K G +++   LY  MI +G                       
Sbjct: 640 RGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG----------------------- 676

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG---I 498
                   +P    +N L+    + K+ +   +L   M +  I P+  T+ +LI G   +
Sbjct: 677 -------FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKL 729

Query: 499 ASQGSL---------SSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKL 548
           + Q  L         + A  LF +M ++G  P   T + I   L K GK       + KL
Sbjct: 730 SKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789

Query: 549 MERNGVAPDIA 559
            ++  V   +A
Sbjct: 790 YKKKTVQELLA 800


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 224/428 (52%), Gaps = 5/428 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++GL   G +E AF +  Q+ ++G  P+  T   ++K LC  G I  A +LFD ++
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G KPNV T++ LI+  C++ K+E+A  +   M++  + P +I Y+ LI+G  K GR+ 
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              ELL     R  K +V  F+ +M+    +G   +AV    RML+ G  P+++SY++LI
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC++G +  A  L   +    +EP  LT++++I+ FCK GK     +    M+++G+ 
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            D V  + LI+G+       DAL      V+M ++      N ++D   +  +  + + +
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              +    + P V+T+T L+ G+   G ++ +  +   M   G  P+V  Y+ II+GL +
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +     +   M+ +GV+P+   Y V++   +    LD AL+    + +RG E +   
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI 688

Query: 596 YNTIICGY 603
           Y++++ G+
Sbjct: 689 YSSLLQGF 696



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 219/426 (51%), Gaps = 8/426 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A+  +R++   GFV  ++    I+  LC NG    A      +L +G   +    ++L+ 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238

Query: 257 AFCKEAKLEKAFQLYNLM-MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
            FC+   L  A +++++M  E+   P+ + YSILI GL + GRL+E   L     ++G +
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
                ++ ++ A    G + +A   +D M+  G  PNV +Y++LI GLC+ G++ EA G+
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
             +++  R+ PS++TY++LI+G+CK G++   F L   M KR  KP+    + L+ GL  
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418

Query: 434 MGDALRFFFQSVRM---TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           +G   +      RM    L P++  +N L+DG CR        KL   M  ++I+PD +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
            T +I     QG    A      ML++G++ D +T + +I G+ K       L + + + 
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
           +  +       NV+L+ML K C +   L + G++   GL P ++TY T++ G   + S  
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL--IRSGD 596

Query: 611 IDGYFK 616
           I G F+
Sbjct: 597 ITGSFR 602



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 155/632 (24%), Positives = 273/632 (43%), Gaps = 77/632 (12%)

Query: 21  SESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKW----THNCVSSPNIAQLIHVLLQ 76
           S  K+ +S +  N A+ +++ L +++N    ++FF W    +  C       QL+ +++ 
Sbjct: 58  SSLKSLVSHMNPNVASQVIS-LQRSDNDI-CVRFFMWVCKHSSYCFDPTQKNQLLKLIVS 115

Query: 77  SDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFA 136
           S +  VA  V   ++ +  +                C+   L   Y      DE  E+F 
Sbjct: 116 SGLYRVAHAVIVALIKECSR----------------CEKEMLKLMYC----FDELREVFG 155

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKG 192
           +  +   Y S      L+  L   +     Y   R M   GF V    Y  ++N L + G
Sbjct: 156 FRLNYPCYSS------LLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNG 209

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL-LLVGPKPNVVTF 251
             E A     ++++ GFV +      +L   C    + +A  +FDV+   V   PN V++
Sbjct: 210 YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSY 269

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S LI+  C+  +LE+AF L + M E    P    Y++LI  L   G + +   L    + 
Sbjct: 270 SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP 329

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           RG K +V  ++ ++D     G +  A     +M+     P+VI+Y+ LI G C+ GR+V 
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  L   +  R  +P++ T++ L++G C+ GK      L   M+  GL PD V  ++LI+
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           GL     M  A +         + P+   F  +++  C+  +A        LM    I  
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKR----------------------------- 517
           D +T T LI G+   G    A+ +   ++K                              
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569

Query: 518 ------GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
                 GL P V+TY+ ++ GL +  +I+    + +LM+ +G  P++  Y +++N L + 
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             ++ A KL   + D G+ P+ +TY  ++ GY
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 187/381 (49%), Gaps = 13/381 (3%)

Query: 236 FDVLLLV-GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD---LVPDLIIYSILID 291
           FD L  V G + N   +S+L+ +    AKL+  F  Y     M+    V  +I Y  +++
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSL---AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVN 203

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-GFL 350
            L K G  +     +   L  G  LD  + +S++  +    ++  A++ +D M       
Sbjct: 204 ALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCA 263

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN +SYSILI GLC+ GRL EA GL  Q+  +  +PS  TY+ LI   C  G +   F+L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +D MI RG KP+    ++LI+GL  D     A     + V+  + P++  +N L++G C+
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             R     +L  +M     KP+V T   L+ G+   G    A+ L  +ML  GL+PD+++
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ +I GL +  +++    +   M    + PD   +  ++N   K+   D A    G + 
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503

Query: 586 DRGLEPDIITYNTIICGYCSL 606
            +G+  D +T  T+I G C +
Sbjct: 504 RKGISLDEVTGTTLIDGVCKV 524



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 126/531 (23%), Positives = 220/531 (41%), Gaps = 81/531 (15%)

Query: 96  KTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           K +N F    D +   GC      Y+ LI+   R GKI+E+  +   M    I+ S    
Sbjct: 319 KAFNLF----DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVI 205
             L++       V   ++L   M  +  C      +  LM GL R G    A H+ ++++
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
             G  P+IV+ N ++  LC  G +  A  L   +     +P+ +TF+ +INAFCK+ K +
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN------------------ELLL 307
            A     LM+   +  D +  + LIDG+ K G+ ++                     ++L
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553

Query: 308 TALDRGLKL-----------------DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L +G K+                  VV +++++D  +  GD+  + +  + M   G L
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV  Y+I+I GLCQ GR+ EA  L   +    + P+ +TY+ ++ G+  +GKL      
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD---------------ALRFFFQSVRMTLIPNLFI 455
              M++RG + +  + S L+ G +                 ALR         LI  +  
Sbjct: 674 VRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQ 733

Query: 456 FNTLMDGCC-----------RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
               + G C           R   + D V+  +  G++  K       +++    S+   
Sbjct: 734 LGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK----AMDIIMESYCSKKKH 789

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM-FKLMERNGV 554
           +  + L   +LK G  P   ++  +I GL K  +      +  +L+  NGV
Sbjct: 790 TKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGV 840


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 222/464 (47%), Gaps = 38/464 (8%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C Y  L+ G    G   +AF +  ++ + G  P +VT N ++  LC  G++  A  LFD 
Sbjct: 255 CSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDE 314

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG- 297
           +  VG + N +TF+ LI+ + K  ++++A   Y  M    LVPD   ++I+  G +K G 
Sbjct: 315 MAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGH 374

Query: 298 -------------------------------RLKEGNELLLTALDRGLKLDVVVFSSVMD 326
                                          RL +  ELL  A+++G  L V  F++++ 
Sbjct: 375 AAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIA 434

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           AY   G    A + Y  M   G  P+  +++ LI GLC QGRL EA  L   ++ +    
Sbjct: 435 AYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCL 494

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           S  +++  +D   + G        +D+M K GL+PD +  S  INGL     + +A + F
Sbjct: 495 ST-SFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAF 553

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +     ++PN F +N+++   CR    T+ +KL   M    + PD+ T  +LI G+  +
Sbjct: 554 AEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCRE 613

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G L     L   M   GLTPD +TY+ II+   + K+++  ++    M   G  PDI  Y
Sbjct: 614 GKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTY 673

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           N+ ++ L     L+ A K+  +L   G  PD +TYNT++ G CS
Sbjct: 674 NIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICS 717



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 214/492 (43%), Gaps = 73/492 (14%)

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++  L  G+   A  +  +V + G  P++     +L+ L  +G++  A ++F+ +   GP
Sbjct: 156 LHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGP 215

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +P++ TF+ +I  FC    +  A  L  +M E  +VP++  Y+ILI G    G  ++  +
Sbjct: 216 RPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFK 275

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           L       G +  VV ++ ++D     G +  A + +D M   G   N I++++LI G  
Sbjct: 276 LFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYA 335

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYS-------------------------SLIDG-- 397
           + GR+ +AC  + ++  R L P   T++                          L DG  
Sbjct: 336 KTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMD 395

Query: 398 -----FCKSGKLRDGFSLYDNMIKRGLKP------DAVVCSLLINGLMGDALRFFFQSVR 446
                 C   +L D + L    I++G  P      +A++ +    GL  +A   +    +
Sbjct: 396 MLVCRLCWDCRLDDAWELLRGAIEQG-APLSVTGFNALIAAYSKEGLHEEAFELYRIMNK 454

Query: 447 MTLIPNLFIFNTLMDGCCRLKR----------------------------------ATDT 472
           + L P+   FN L+ G C   R                                  A   
Sbjct: 455 LGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNAVCA 514

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           +K +  MG   ++PD I  +  I G+     ++ A   F +M  RG+ P+  TY++II  
Sbjct: 515 LKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISA 574

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L +  N++  L + + M +NG+ PDI   N+L++ L +E  L+    L   +   GL PD
Sbjct: 575 LCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPD 634

Query: 593 IITYNTIICGYC 604
            +TYNTII  YC
Sbjct: 635 TVTYNTIINAYC 646



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 155/349 (44%), Gaps = 47/349 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI  Y + G  +E+ E++  M+ +G+  S      L+  L +   + +   L   M 
Sbjct: 429 FNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMV 488

Query: 175 GKGFCV---YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            KG+C+   +   ++   R+G    A      + + G  P+ +  +  +  LC    +  
Sbjct: 489 SKGYCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNE 548

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A   F  +   G  PN  T++++I+A C+   + +A +L   M +  LVPD+   +ILID
Sbjct: 549 AYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILID 608

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL + G+L+  + LLL     GL  D V ++++++AY    D+  A+   ++ML  G  P
Sbjct: 609 GLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEP 668

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG-------------- 397
           ++ +Y+I +  LC    L +A  +  +++     P  +TY++L+DG              
Sbjct: 669 DIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSDVLDRAMILTG 728

Query: 398 --------------------FCKSG----------KLRDGFSLYDNMIK 416
                               FCK G          KLR+   ++D+  +
Sbjct: 729 RLIKMAFQPNTITLNVFLSHFCKQGFGKRALMWAEKLREDSFVFDDATR 777



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 139/347 (40%), Gaps = 71/347 (20%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G+V  A   ++ M   G  P++ +++ +I G C +G +  A GL G +    + P++ +Y
Sbjct: 198 GEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSY 257

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVR 446
           + LI G C  G  RD F L++ M + G +P  V  ++L++     G M +A R F +  +
Sbjct: 258 NILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQ 317

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI-----ASQ 501
           + +  N   FN L+DG  +  R       +  M    + PD  T  ++  G      A+Q
Sbjct: 318 VGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQ 377

Query: 502 --------GS-------------------LSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
                   GS                   L  A  L    +++G    V  ++A+I    
Sbjct: 378 LVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYS 437

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVL------------------------------ 564
           K         ++++M + G+AP  + +N L                              
Sbjct: 438 KEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTS 497

Query: 565 ----LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
               L+   +E N   ALK +  +   GL+PD I ++  I G C L+
Sbjct: 498 FTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLD 544


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 246/500 (49%), Gaps = 12/500 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ Y +   +++++ ++  M+     L PD+V    +M+ L  S  V +   + R 
Sbjct: 90  YTTLIDAYCKSQCLEDALYMYDEMTVKS--LVPDVVTYTCIMNGLCKSGKVEEAKSVFRE 147

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  L++ L ++G +  AF +  +++ RG   ++V    ++  L   G 
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGM 207

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             NA  +F VLL     PN VT+S LI+  CK   + K   L   M E  + P++I+YS 
Sbjct: 208 ANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS 267

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++DG  K G L E  +++   + R +  +V V+ +++D Y      G A+  +  M + G
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N       +  L + GR+ EA  LF  ++ R L P  + Y+S++DGF K+GK  D F
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           ++   M ++    D V  ++LINGL      ++  F     ++ L P+   FNT+++  C
Sbjct: 388 NIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYC 447

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +     + +KL   M  Y +KP+ IT  +L++ + + G +   + L   ML  G  P   
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           T+ A++    K +   V LHM   +   GV  D++ YN L++   +   +  A  +F  +
Sbjct: 508 THKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567

Query: 585 TDRGLEPDIITYNTIICGYC 604
             +G+  DIITYN +I GYC
Sbjct: 568 MGKGILADIITYNALIHGYC 587



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 163/640 (25%), Positives = 279/640 (43%), Gaps = 109/640 (17%)

Query: 64  SPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE 120
            PN+     LI    +S   + A +++D+M ++             SL      Y+ ++ 
Sbjct: 84  EPNVITYTTLIDAYCKSQCLEDALYMYDEMTVK-------------SLVPDVVTYTCIMN 130

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM--RGKGF 178
              + GK++E+  +F  M ++G+  +      L+  L    +V + + L   M  RG GF
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190

Query: 179 --CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
              VY  LM+GL + G+  NA  M + +++   VPN VT + ++   C  G +     L 
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             +      PNV+ +S++++ + K+  L +A  +   M++ +++P++ +Y  LIDG FKA
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 297 -----------------------------------GRLKEGNELLLTALDRGLKLDVVVF 321
                                              GR++E +EL    + RGL  D V +
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +S+MD +   G    A      M       +V++Y++LI GL + G+  E+      +  
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQ 429

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-------- 433
             L P   T++++I+ +CK G L +   L + M   GLKP+++ C++L+  L        
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 434 ----------MG------------DA----------LRFFFQSVRMTLIPNLFIFNTLMD 461
                     MG            DA          L    Q V M +  +L  +NTL+ 
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549

Query: 462 GCCRL---KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
             CRL   +RAT   K  M  G   I  D+IT+  LI G      L  A  +  QML  G
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKG---ILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           ++P+V TY+ ++ GL   + I     +   M+  G+ P+   Y++L++   K  N+   +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
           KL+ ++  +G  P   TYN +I       SC   G   SQ
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLI-------SCFAKGKKMSQ 699



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 199/378 (52%), Gaps = 16/378 (4%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           + +V  F+ LI+ +C+  ++ +A +L   M      PD++ Y+ L++G  K G L    +
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           L+       L+ +V+ +++++DAY     +  A+  YD M     +P+V++Y+ ++ GLC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + G++ EA  +F ++    + P+  +Y++LID   K G + + F L   M+ RG+  D V
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 425 VCSLLINGL----MGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           V + L++GL    M +     FQ +   +L+PN   ++ L+DG C+L        L   M
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              +I P+VI ++ ++ G   +G L+ A+ +  +M++R + P+V  Y  +I G FK    
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
            + L +FK M+  G+  +  + +  +N L +   ++ A +LF  +  RGL PD + Y + 
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS- 372

Query: 600 ICGYCSLNSCLIDGYFKS 617
                     ++DG+FK+
Sbjct: 373 ----------MMDGFFKA 380



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 171/312 (54%), Gaps = 22/312 (7%)

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++  V  F+ ++D Y   G++ RAV+  + M   G  P++++Y+ L+ G C+ G L  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L G++ +  LEP+++TY++LID +CKS  L D   +YD M  + L PD V  + ++NGL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP-- 486
                + +A   F +   + ++PN F + TL+D    L +  +  + F+L G   ++   
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDS---LFKEGNVAEAFVLQGRMVVRGIG 189

Query: 487 -DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
            DV+ +T L+ G+   G  ++A  +F  +L+  L P+ +TYSA+I G  K  +++ G  +
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            + ME   + P++ +Y+ +++   K+  L+ A+ +  ++  R + P++  Y T       
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGT------- 302

Query: 606 LNSCLIDGYFKS 617
               LIDGYFK+
Sbjct: 303 ----LIDGYFKA 310



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 117/512 (22%), Positives = 208/512 (40%), Gaps = 100/512 (19%)

Query: 65  PNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           PN+     LI    ++D R +A  +F +M  +  +  NF                  + N
Sbjct: 295 PNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFV-------------IDSFVNN 341

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGK--G 177
             R G+++E+ E+F  M   G  L PD V    +M     +      + + + M  K  G
Sbjct: 342 LKRSGRMEEADELFKDMMSRG--LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSG 399

Query: 178 FCV--YEFLMNGLLRKGVIE----------------------------------NAFHMH 201
           F V  Y  L+NGL + G  E                                  NA  + 
Sbjct: 400 FDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLL 459

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            ++   G  PN +TCN +++RLC  G+I     L + +L++G  P   T   +++A  K 
Sbjct: 460 NEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            + +    +++ ++ M +  DL  Y+ LI    + G ++    +    + +G+  D++ +
Sbjct: 520 RRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY 579

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++  Y     + +A   + +ML  G  PNV +Y+IL+ GL     + EA GL  Q+  
Sbjct: 580 NALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE 639

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           R L P+  TY  L+ G  K G +++   LY  MI +G                       
Sbjct: 640 RGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG----------------------- 676

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG---I 498
                   +P    +N L+    + K+ +   +L   M +  I P+  T+ +LI G   +
Sbjct: 677 -------FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKL 729

Query: 499 ASQGSL---------SSAILLFFQMLKRGLTP 521
           + Q  L         + A  LF +M ++G  P
Sbjct: 730 SKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 239/467 (51%), Gaps = 23/467 (4%)

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L+S L       Q + L   MR  G     C    L+N L     +     +   +++R
Sbjct: 101 HLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRR 160

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G++P+IVT   ++K LC+  +I  A+ LF  +  +G  PN +T+ TL+   C+   +  A
Sbjct: 161 GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIA 220

Query: 268 FQLYNLMME------MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            +L+  M+       ++  P +I YSI+ID L K  R  E  +L      +G+   V+ +
Sbjct: 221 LKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISY 280

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +S+M           A + ++ M+N G  PNV+++++LI  LC++G+++EA  L   ++ 
Sbjct: 281 TSLMWE--------EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQ 332

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           R + P+LLTY+SLI+GFC  G L     L+ +M  +G +PD +  ++LING      + +
Sbjct: 333 RGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEE 392

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A++ +   +++   P++  +  L+ G  +  +  D  KLF +M +Y I  D+  + + + 
Sbjct: 393 AMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLN 452

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+   G L  A+ LF ++    +  D+  ++ +I GL K   +     +F+ + +  + P
Sbjct: 453 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP 512

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           D+  YN++++   +   +  A  LF ++   G  PD ITY T+I G+
Sbjct: 513 DVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGF 559



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 267/552 (48%), Gaps = 39/552 (7%)

Query: 28  SDLQFNQANAILANLIKTNNPTP--AIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASH 85
           + + F Q  ++  +  KT N T   A QFF        +P ++   H+L         S 
Sbjct: 55  TPISFQQQLSMFLHNCKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQ 114

Query: 86  VFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           VF          YN  RL    +    C  + L+     + ++ E + + A +   G Y+
Sbjct: 115 VF--------YLYNQMRL--SGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRG-YI 163

Query: 146 SPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFH 199
            PD+V    L+  L   + + +   L   M+  G       Y  LM GL R G I  A  
Sbjct: 164 -PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALK 222

Query: 200 MHRQVIQRG------FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +H++++         F P +++ + I+  LC + +   A  LF+ + + G  P V+++++
Sbjct: 223 LHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTS 282

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L+         E+A +L+N M+   + P+++ +++LID L K G++ E  +LL   + RG
Sbjct: 283 LM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRG 334

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  +++ ++S+++ +  +GD+  A + +  M + G  P+VI Y++LI G C+  ++ EA 
Sbjct: 335 IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAM 394

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L+  +L     P + TY +L+ G  + GK+ D   L+  M   G+  D  +  + +NGL
Sbjct: 395 KLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGL 454

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                + +A+  F +     +  ++  FN L+DG C+  +     +LF  +    ++PDV
Sbjct: 455 CKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDV 514

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+ ++I      G +  A +LF +M K G TPD ITY+ +I G F+ K +   + +  +
Sbjct: 515 VTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHM 574

Query: 549 MERNGVAPDIAI 560
           M +  V+ D+ I
Sbjct: 575 MVQRDVSLDVNI 586



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 200/382 (52%), Gaps = 21/382 (5%)

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L++ + L G  P+  T + L+N  C   ++ +   +   ++    +PD++ Y+ LI GL 
Sbjct: 118 LYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLC 177

Query: 295 KAGRLKEGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG----- 348
              R+ +   LL T + + G   + + + ++M      G++  A++ +  MLN       
Sbjct: 178 MEHRISKA-ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGI 236

Query: 349 -FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
            F P VISYSI+I  LC+  R  EA  LF ++ ++ + P++++Y+SL+          + 
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEA 288

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L++ M+ +G++P+ V  ++LI+     G + +A       ++  ++PNL  +N+L++G
Sbjct: 289 KRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEG 348

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C +       +LF+ M     +PDVI +TVLI G      +  A+ L+  ML+ G  PD
Sbjct: 349 FCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPD 408

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TY A++ GLF+G  +     +F +M+  G+  D+ IY + LN L K   L  A++LF 
Sbjct: 409 VKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFN 468

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
           +L    ++ DI  +N +I G C
Sbjct: 469 KLKSYNIKLDIECFNCLIDGLC 490



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 63/136 (46%)

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
           A    + F LM   N  P + + T L+ G+A     S    L+ QM   G++PD  T + 
Sbjct: 77  AIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNI 136

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +++ L     +  GL +   + R G  PDI  Y  L+  L  E  +  A  LF ++   G
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196

Query: 589 LEPDIITYNTIICGYC 604
             P+ ITY T++ G C
Sbjct: 197 CTPNAITYGTLMKGLC 212


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 232/467 (49%), Gaps = 12/467 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAM---RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVI 205
           L+  L D N   +  +L   M   RG G       Y  ++NG  ++G  + A+  + +++
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            R   P++VT + I+  LC    +  A  +   ++  G  PN +T++++++ +C   + +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A      M    + PD++ Y+ L+D L K GR  E  ++  +   RGL+ D+  + +++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
             Y   G +       D M+  G  P+   ++ILI    +Q ++ EA  +F ++    L 
Sbjct: 344 QGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLN 403

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P+++TY ++I   CKSG + D    ++ MI  GL P+ +V + LI+ L        A   
Sbjct: 404 PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL 463

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             + +   +  N   FN+++   C+  R  ++ KLF LM    +KP+VIT++ LI G   
Sbjct: 464 ILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCL 523

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G +  A  L   M   G+ PD +TY+ +I+G  +   +   L +FK M  +GV+P+I  
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           YN++L  L       AA +L+  +T  G + ++ TYN I+ G C  N
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNN 630



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 242/496 (48%), Gaps = 53/496 (10%)

Query: 162 SVGQYYKLCRAMRGK---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           +V +Y ++ RA  GK       Y  L+    R G ++  F     V+++GF    +T   
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 219 ILKRLCINGQIGNASSLFDVLLL----VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           +LK LC + +  +A    D++L     +   P+V + + L+   C E + ++A +L ++M
Sbjct: 128 LLKGLCADKRTSDA---MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184

Query: 275 ME---MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
            +       PD++ Y+ +I+G FK G   +        LDR +  DVV +SS++ A    
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
             + +A++    M+  G +PN ++Y+ ++ G C   +  EA G   ++    +EP ++TY
Sbjct: 245 QAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTY 304

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-AVVCSLL----INGLMGDALRFFFQSVR 446
           +SL+D  CK+G+  +   ++D+M KRGL+PD A  C+LL      G + +        VR
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR 364

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             + P+  +FN L+    + ++  + + +F  M  + + P+V+T+  +I  +   GS+  
Sbjct: 365 NGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDD 424

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGL--------------------------------- 533
           A+L F QM+  GLTP++I Y+++IH L                                 
Sbjct: 425 AMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIH 484

Query: 534 --FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
              K   +     +F LM R GV P++  Y+ L++       +D A KL   +   G++P
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544

Query: 592 DIITYNTIICGYCSLN 607
           D +TYNT+I GYC ++
Sbjct: 545 DCVTYNTLINGYCRVS 560



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 245/493 (49%), Gaps = 13/493 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  + + G  D++   +  M D  I  SPD+V    +++ L    ++ +  ++   
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRRI--SPDVVTYSSIIAALCKGQAMDKAMEVLTT 256

Query: 173 MRGKGF---CV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G    C+ Y  +++G       + A    +++   G  P++VT N ++  LC NG+
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +FD +   G +P++ T+ TL+  +  +  L +   L +LM+   + PD  +++I
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    K  ++ E   +       GL  +VV + +V+      G V  A+  +++M++ G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN+I Y+ LI  LC   +  +A  L  ++L R +  + + ++S+I   CK G++ +  
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D M++ G+KP+ +  S LI+G      M +A +       + + P+   +NTL++G 
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           CR+ R  D + LF  M    + P++IT+ ++++G+      ++A  L+  + K G   ++
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ I+HGL K       L MF+ +    +  +   +N+++  L+K    D A  LF  
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVA 676

Query: 584 LTDRGLEPDIITY 596
            +  GL P+  TY
Sbjct: 677 FSSNGLVPNYWTY 689



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 195/405 (48%), Gaps = 20/405 (4%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---DLVPDLIIYS 287
           +A  +FD LL  G   ++   +  +    + +    A   YN M       + P +  Y 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLN 346
           ILI    +AGRL  G   L   + +G +++ + F+ ++           A+     RM  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR---LEPSLLTYSSLIDGFCKSGK 403
              +P+V S +IL+KGLC + R  EA  L   +   R     P +++Y+++I+GF K G 
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
               +S Y  M+ R + PD V  S +I  L     M  A+      V+  ++PN   +N+
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C  ++  + +     M    ++PDV+T+  L+  +   G  + A  +F  M KRG
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           L PD+ TY  ++ G +  K   V +H +  LM RNG+ PD  ++N+L+    K+  +D A
Sbjct: 332 LEPDIATYCTLLQG-YATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 578 LKLFGQLTDRGLEPDIITYNTII---CGYCSLNSCLIDGYFKSQI 619
           + +F ++   GL P+++TY  +I   C   S++  ++  YF+  I
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML--YFEQMI 433



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 217/474 (45%), Gaps = 13/474 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y    +  E++     M   G+   PD+V    LM  L  +    +  K+  +
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGV--EPDVVTYNSLMDYLCKNGRSTEARKIFDS 326

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  P+    N ++       +
Sbjct: 327 MTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEK 386

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  PNVVT+  +I   CK   ++ A   +  M++  L P++I+Y+ 
Sbjct: 387 VDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 446

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L    +  +  EL+L  LDRG+ L+ + F+S++ ++   G V  + + +D M+  G
Sbjct: 447 LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNVI+YS LI G C  G++ EA  L   +    ++P  +TY++LI+G+C+  ++ D  
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+  M+  G+ P+ +  ++++ GL        A   +    +      L  +N ++ G 
Sbjct: 567 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+     + +++F  + + +++ +  T  ++I  +   G    A  LF      GL P+ 
Sbjct: 627 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNY 686

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            TY  +   +     +     +F  ME NG   D  + N ++  L++   +  A
Sbjct: 687 WTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 164/371 (44%), Gaps = 28/371 (7%)

Query: 37  AILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQ 93
           A++  L K+ +   A+ +F+   +   +PNI     LIH L   D  D A  +  +M+ +
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
                  F             ++ +I ++ + G++ ES ++F  M  +G+   P+++   
Sbjct: 471 GICLNTIF-------------FNSIIHSHCKEGRVIESEKLFDLMVRIGV--KPNVIT-- 513

Query: 154 MSCLVD----SNSVGQYYKLCRAMRGKGF---CV-YEFLMNGLLRKGVIENAFHMHRQVI 205
            S L+D    +  + +  KL  +M   G    CV Y  L+NG  R   +++A  + ++++
Sbjct: 514 YSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMV 573

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
             G  PNI+T N IL+ L    +   A  L+  +   G +  + T++ +++  CK    +
Sbjct: 574 SSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTD 633

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A +++  +   DL  +   ++I+I  L K GR  E  +L +     GL  +   +  + 
Sbjct: 634 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 693

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           +  +G G +    Q +  M + G   +    + +++ L Q+G +  A      +  +   
Sbjct: 694 ENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS 753

Query: 386 PSLLTYSSLID 396
               T S  ID
Sbjct: 754 LEASTASLFID 764



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 51/263 (19%), Positives = 102/263 (38%), Gaps = 44/263 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV------QRLMSCLVDSNSVGQYYK 168
           Y+ LI  Y R+ ++D+++ +F  M   G+  SP+++      Q L      + +   Y  
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGV--SPNIITYNIILQGLFHTRRTAAAKELYVG 606

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + ++        Y  +++GL +  + + A  M                            
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRM---------------------------- 638

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
                  F  L L   +    TF+ +I A  K  + ++A  L+       LVP+   Y +
Sbjct: 639 -------FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           + + +   G L+E ++L  +  D G  +D  + + ++   +  G++ RA  TY  M++  
Sbjct: 692 MAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEK 750

Query: 349 FLPNVISYSILIKGLCQQGRLVE 371
                 S + L   L   G+  E
Sbjct: 751 HFSLEASTASLFIDLLSGGKYQE 773


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 218/424 (51%), Gaps = 8/424 (1%)

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK---RLCINGQIGNASSLFDVLLLVGPK 245
           ++ G   +AF + +++ +    PN++TCN +L    R   +  +  +   F+  + +G  
Sbjct: 146 VQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIV 205

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNV TF+ +I  +C E K + A +  N+M + +  PD + Y+ ++D L K GRL +  +L
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDL 265

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L+    RGL  +   ++ ++  Y  +G +  A    + M     LP+V +Y++LI GLC 
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +GR+ EA  L  ++   +L P +++Y++LI+G  +  K+ + F L + M ++G+KP+AV 
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385

Query: 426 CSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            ++++      G M DA     +       P+   +NTL++G C+     +  +    MG
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
             N+K D +T   ++R +  +  L  A  L     KRG   D ++Y  +I G FK  N+ 
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             L ++  M+   + P    YN ++  L +    + A+    +L + GL PD  TYNTI+
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565

Query: 601 CGYC 604
            GYC
Sbjct: 566 HGYC 569



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 231/497 (46%), Gaps = 21/497 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+  Y ++G + E+  +   M+   +         L++ L +   + + +KL   M 
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340

Query: 175 G----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L+NG L    I  AF +  ++ ++G  PN VT N ++K  C  G++ 
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +AS+    +   G  P+ VT++TLIN +CK   + +AF+  + M   ++  D +  + ++
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L +  +L+E  +LL +A  RG  +D V + +++  Y   G+V RA++ +D M     +
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEII 520

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y+ +I GLCQ G+  +A     ++L   L P   TY++++ G+C+ G +   F  
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++ M++   KPD   C++L+ GL     +  AL+ F   V      +   +NTL+   C+
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             R  D   L   M    + PD  T+  +I  +   G +  A     +ML++G  PD + 
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV- 699

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
                  L   KN +V                   Y+  +  L  E     A+++FG+  
Sbjct: 700 -------LQLDKNETV----VTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESK 748

Query: 586 DRGLEPDIITYNTIICG 602
            +G+  D  TY  ++ G
Sbjct: 749 QKGITVDKSTYINLMDG 765



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 203/399 (50%), Gaps = 5/399 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+ VT N IL  LC  G++G+A  L   +   G  PN  T++ L+  +CK   L++A  +
Sbjct: 241 PDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
             LM + +L+PD+  Y++LI+GL   GR++E  +L     +  L  DVV ++++++  + 
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
              +  A +  + M   G  PN ++++I++K  C++G++ +A     ++      P  +T
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           Y++LI+G+CK+G + + F   D M ++ +K D+V  + ++  L     + +A +    + 
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +     +   + TL+ G  +       +KL+  M    I P  +T+  +I G+   G   
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            AI    ++L+ GL PD  TY+ I+HG  +  ++         M  N   PD+   N+LL
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             L  E  L+ ALKLF     +G   D +TYNT+I   C
Sbjct: 601 RGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 209/428 (48%), Gaps = 5/428 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++ L +KG + +A  +   +  RG +PN  T N ++   C  G +  A+++ +++
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P+V T++ LIN  C E ++E+AF+L + M  + L+PD++ Y+ LI+G  +  ++
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +LL    ++G+K + V  + ++  Y   G +  A  T  +M   GF P+ ++Y+ L
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+ G + EA     ++  + ++   +T ++++   C+  KL + + L  +  KRG 
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             D V    LI G   D     AL+ + +     +IP+   +N ++ G C+  +    + 
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
               +    + PD  T+  ++ G   +G +  A     +M++    PDV T + ++ GL 
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +   L +F      G A D   YN L+  L KE  LD A  L  ++ ++ L PD  
Sbjct: 605 MEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664

Query: 595 TYNTIICG 602
           TYN II  
Sbjct: 665 TYNAIITA 672



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 180/366 (49%), Gaps = 8/366 (2%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK---AGRLKEG 302
           P+     T I A+ +  +   AFQ++  M  + L P+L+  + L++ L +   +  +   
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            E    A+  G+  +V  F+ V+  Y        AV+  + M      P+ ++Y+ ++  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC++GRL +A  L   +  R L P+  TY+ L+ G+CK G L++  ++ + M +  L PD
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
               ++LINGL     + +A +   +   + L+P++  +NTL++GC    + ++  KL  
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    +KP+ +TH ++++    +G +  A     +M + G +PD +TY+ +I+G  K  
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           N+         M R  +  D    N +L  L +E  L+ A KL      RG   D ++Y 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 598 TIICGY 603
           T+I GY
Sbjct: 493 TLIVGY 498



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/449 (22%), Positives = 190/449 (42%), Gaps = 77/449 (17%)

Query: 95  GKTYNFFRLFRDSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G+    F+L RD + +         Y+ LI   +   KI E+ ++   MS+ G+   P+ 
Sbjct: 327 GRIEEAFKL-RDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV--KPNA 383

Query: 150 VQR--LMSCLVDSNSVGQYYKLCRAMRGKGF---CV-YEFLMNGLLRKGVIENAFHMHRQ 203
           V    ++        +         M   GF   CV Y  L+NG  + G +  AF    +
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           + ++    + VT N IL+ LC   ++  A  L       G   + V++ TLI  + K+  
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +++A +L++ M E +++P  + Y+ +I GL + G+ ++    L   L+ GL  D   +++
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNV------------------------------ 353
           ++  Y   GDV +A Q +++M+   F P+V                              
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKG 623

Query: 354 -----ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
                ++Y+ LI  LC++GRL +A  L  ++  + L P   TY+++I     SG++R+  
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683

Query: 409 SLYDNMIKRGLKPDAV----------------------------VCSLLINGLMGDALRF 440
                M+++G  PD V                            +  L   G   DA+R 
Sbjct: 684 EFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRI 743

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           F +S +  +  +   +  LMDG  + +++
Sbjct: 744 FGESKQKGITVDKSTYINLMDGLIKRRKS 772



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 124/231 (53%), Gaps = 8/231 (3%)

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM----G 435
           ++R   PS     + I  + +SG+    F ++  M +  L+P+ + C+ L+N L+     
Sbjct: 127 ILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSS 186

Query: 436 DALRF----FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
            ++ F    F  ++++ ++PN+  FN ++ G C   +  D V+   +MG YN  PD +T+
Sbjct: 187 HSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTY 246

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             ++  +  +G L  A  L   M  RGL P+  TY+ +++G  K   +    ++ +LM +
Sbjct: 247 NTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           N + PD+  YN+L+N L  E  ++ A KL  ++ +  L PD+++YNT+I G
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 19/205 (9%)

Query: 422 DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA----------TD 471
           D  + + + +G    A + F +  R+ L PNL   NTL++   R   +           D
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFND 198

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            +KL        I P+V T  ++I G   +     A+     M K   +PD +TY+ I+ 
Sbjct: 199 AIKL-------GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            L K   +     +   M+  G+ P+   YN+L+    K   L  A  +   +T   L P
Sbjct: 252 TLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 592 DIITYNTIICGYCSLNSCLIDGYFK 616
           D+ TYN +I G C  N   I+  FK
Sbjct: 312 DVWTYNMLINGLC--NEGRIEEAFK 334



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 3/183 (1%)

Query: 427 SLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           SLL+  +  D       S+     P+  + +T +    +  +     ++F  M    ++P
Sbjct: 109 SLLLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRP 168

Query: 487 DVITHTVLIRGI---ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           +++T   L+  +    S  S+S +   F   +K G+ P+V T++ +I+G          +
Sbjct: 169 NLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAV 228

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
               +M +   +PD   YN +L+ L K+  L  A  L   +  RGL P+  TYN ++ GY
Sbjct: 229 EFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGY 288

Query: 604 CSL 606
           C +
Sbjct: 289 CKM 291


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 232/429 (54%), Gaps = 5/429 (1%)

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           E L    LR   + +A ++ R++++    P+IV  N++L  +    +     SL   + +
Sbjct: 54  ERLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEV 113

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G + ++ TF+ +IN FC   ++  A  +   M+++   PD +    L++G  +  R+ +
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              L+   ++ G + D+V +++++D+      V  A+  +  +   G  PNV++Y+ L+ 
Sbjct: 174 AVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVN 233

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GLC  GR  +A  L   ++ R++ P+++TYS+L+D F K+GK+ +   +++ M++  + P
Sbjct: 234 GLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP 293

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D V  S LINGL     + +A + F   V     P++  +NTL++G C+ KR  D +KLF
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    +  + +T+  LI+G    G +  A   F QM   G++PD+ TY+ ++ GL   
Sbjct: 354 RKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDN 413

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +   L +F+ M+++ +  DI  Y  ++  + K   ++ A  LF  L+ +GL+PDI+TY
Sbjct: 414 GLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTY 473

Query: 597 NTIICGYCS 605
            T++ G C+
Sbjct: 474 TTMMSGLCT 482



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 194/380 (51%), Gaps = 11/380 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NG  R+  + +A  +  ++++ G+ P+IV  N I+  LC   ++ +A   F  +   G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKG 220

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNVVT++ L+N  C   +   A +L   M++  + P++I YS L+D   K G++ E  
Sbjct: 221 IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAK 280

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           E+    +   +  D+V +SS+++       +  A Q +D M++ G  P+V+SY+ LI G 
Sbjct: 281 EIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGF 340

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+  R+ +   LF ++  R L  + +TY++LI GF + G +      +  M   G+ PD 
Sbjct: 341 CKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDI 400

Query: 424 VVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              ++L+     NGL+  AL  F    +  +  ++  + T++ G C+  +  D   LF  
Sbjct: 401 WTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCS 460

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           + +  +KPD++T+T ++ G+ ++G       L+ +M + GL  +    S +  G     +
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN---DSMLCLG---DGD 514

Query: 539 ISVGLHMFKLMERNGVAPDI 558
           I++   + K M   G AP +
Sbjct: 515 ITISAELIKKMLSCGYAPSL 534



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 187/334 (55%), Gaps = 8/334 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG 175
           L+  + R  ++ ++V +   M ++G    PD+V    ++  L  +  V       + +  
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIG--YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGR 218

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           KG       Y  L+NGL   G   +A  + R +I+R   PN++T + +L     NG++  
Sbjct: 219 KGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLE 278

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  +F+ ++ +   P++VT+S+LIN  C   ++++A Q+++LM+     PD++ Y+ LI+
Sbjct: 279 AKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLIN 338

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G  KA R+++G +L      RGL  + V +++++  +  +GDV +A + + +M + G  P
Sbjct: 339 GFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP 398

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           ++ +Y+IL+ GLC  G L +A  +F  +    ++  ++TY+++I G CK+GK+ D + L+
Sbjct: 399 DIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLF 458

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
            ++  +GLKPD V  + +++GL    L+   +++
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEAL 492



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 172/317 (54%), Gaps = 5/317 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I++  +  +++++++ F  +   GI  +      L++ L +S       +L R M 
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  L++  ++ G +  A  +  ++++    P+IVT + ++  LC++ +I 
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ +FD+++  G  P+VV+++TLIN FCK  ++E   +L+  M +  LV + + Y+ LI
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G F+ G + +  E        G+  D+  ++ ++      G + +A+  ++ M      
Sbjct: 373 QGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMD 432

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            ++++Y+ +I+G+C+ G++ +A GLF  + ++ L+P ++TY++++ G C  G   +  +L
Sbjct: 433 LDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEAL 492

Query: 411 YDNMIKRGL-KPDAVVC 426
           Y  M + GL K D+++C
Sbjct: 493 YTKMKQEGLMKNDSMLC 509



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 150/326 (46%), Gaps = 24/326 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           NAI+ +L KT     A+ FFK        PN+     L++ L  S   + A+ +   M I
Sbjct: 194 NAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDM-I 252

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +   T N               YS L++ +V+ GK+ E+ EIF  M  M I   PD+V  
Sbjct: 253 KRKITPNVIT------------YSALLDAFVKNGKVLEAKEIFEEMVRMSI--DPDIVTY 298

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L++ L   + + +  ++   M  KG       Y  L+NG  +   +E+   + R++ Q
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ 358

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           RG V N VT N +++     G +  A   F  +   G  P++ T++ L+   C    LEK
Sbjct: 359 RGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEK 418

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  ++  M + ++  D++ Y+ +I G+ K G++++   L  +   +GLK D+V ++++M 
Sbjct: 419 ALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMS 478

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPN 352
                G        Y +M   G + N
Sbjct: 479 GLCTKGLQHEVEALYTKMKQEGLMKN 504



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 55/104 (52%)

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L  AI LF +M+K    P ++ ++ ++  + K K   V + + K ME  G+  D+  +N+
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           ++N       +  AL + G++   G EPD +T  +++ G+C  N
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRN 169


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 241/516 (46%), Gaps = 37/516 (7%)

Query: 98  YNFFRLFRDSLG-DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
           + F    RD LG      + +LI++   + + DE+ E F  M + G+  + +    L+S 
Sbjct: 136 FEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSL 195

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
                    + KL R                       E A+ ++ ++ +     ++ T 
Sbjct: 196 ---------FLKLNRT----------------------EAAWVLYAEMFRLRIKSSVYTF 224

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++  LC  G++  A      +   G KPN+VT++T+++ +C   ++E A  +   M  
Sbjct: 225 NIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKR 284

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             + PD   Y  LI G+ K GRL+E +++    + +GL+   V++++++D +   G++  
Sbjct: 285 QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDM 344

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A    D ML  G  P + +Y+ LI  L  + R  EA  +  ++  + + P  +TY+ LI+
Sbjct: 345 ASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           G+C+    +  F L+D M+  G+KP     + L++ L     M +A   F +     ++P
Sbjct: 405 GYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLP 464

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +  +FN L+DG C         +L   M    + PD +T   +++G   +G +  A  LF
Sbjct: 465 DAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M +RG+ PD I+++ +I G  +  +I     +   M   G  P +  YN L+  L K 
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
              D A +L  ++  +G+ PD  TY T+I G   +N
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 87/184 (47%)

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +A   F+      ++P +   N+L+    +L R      L+  M    IK  V T  ++I
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
             +  +G L  A      M   G+ P+++TY+ I+HG      +     +   M+R  + 
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
           PD   Y  L++ + K+  L+ A K+F ++  +GL P  + YNT+I G+C+  +  +   +
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 616 KSQI 619
           K ++
Sbjct: 349 KDEM 352


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 263/544 (48%), Gaps = 55/544 (10%)

Query: 110 DFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----S 160
           + GC      YS L+++    GK  ++ ++   M++ G   SPD+V    S ++D     
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA--YSTVIDGFFKE 232

Query: 161 NSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN---- 212
             V +   L + M  +G    F  Y  +++ L +   ++ A    RQ++ +G +PN    
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTY 292

Query: 213 -------------------------------IVTCNKILKRLCINGQIGNASSLFDVLLL 241
                                          +VT + ++  LC  G+I  A  +FD + +
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 352

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G  PNV +++ ++N +  +  L     L++LM+   + PD+  +++LI      G L +
Sbjct: 353 KGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDK 412

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              +     D G+K DVV + +V+ A   IG +  A++ +++M++ G  P+  +Y  LI+
Sbjct: 413 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQ 472

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C  G L++A  L  +++   +   ++ +SS+I+  CK G++ D  +++D  +  GL P
Sbjct: 473 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
            AVV S+L++G      M  ALR F   V   + PN  ++ TL++G C++ R  + + LF
Sbjct: 533 TAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLF 592

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    IKP  I + ++I G+   G    A + F +M + G+  +  TY+ ++ GLFK 
Sbjct: 593 REMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKN 652

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
           +     + +FK +    V  +I   N ++  + +   ++ A  LF  ++  GL P ++TY
Sbjct: 653 RCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTY 712

Query: 597 NTII 600
           + +I
Sbjct: 713 SIMI 716



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 256/511 (50%), Gaps = 38/511 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKL--C 170
           Y+ LI  Y   G+  E+V +F  M    I   PD+V    LM  L     + +   +   
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRHSIL--PDVVTLSMLMGSLCKYGKIKEARDVFDT 349

Query: 171 RAMRGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            AM+G+   V+ +  ++NG   KG + +   +   ++  G  P+I T N ++K     G 
Sbjct: 350 MAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 409

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F+ +   G KP+VVT+ T+I A C+  K++ A + +N M++  + PD   Y  
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G    G L +  EL+   ++ G+ LD+V FSS+++    +G V  A   +D  +N G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P  + YS+L+ G C  G++ +A  +F  ++   +EP+ + Y +L++G+CK G++ +G 
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           SL+  M+++G+KP  ++ +++I+GL        F++ R   +P    F+ + +    + +
Sbjct: 590 SLFREMLQKGIKPSTILYNIIIDGL--------FEAGRT--VPAKVKFHEMTESGIAMNK 639

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            T           YNI         ++RG+        AI LF ++    +  ++IT + 
Sbjct: 640 CT-----------YNI---------VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I G+F+ + +     +F  + R+G+ P +  Y++++  LIKE  ++ A  +F  + + G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 589 LEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            EPD    N ++      N  +  G + S+I
Sbjct: 740 CEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 250/534 (46%), Gaps = 51/534 (9%)

Query: 118 LIENYVRIGKIDESVEIFAYMS-DMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAM- 173
           L++ +    + DE+++I  + + ++G    PD+     L+  L D    GQ   L R M 
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCV--PDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 174 RGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            G   C      Y  +++G  ++G +  A  + ++++QRG  P+ VT + ++  LC    
Sbjct: 210 EGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARA 269

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A +    ++  G  PN  T++ LI  +    + ++A +++  M    ++PD++  S+
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329

Query: 289 LIDGLFKAGRLKEGNELLLT-----------------------------------ALDRG 313
           L+  L K G++KE  ++  T                                    L  G
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 389

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  D+  F+ ++ AY   G + +A+  ++ M + G  P+V++Y  +I  LC+ G++ +A 
Sbjct: 390 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
             F Q++ + + P    Y  LI GFC  G L     L   ++  G+  D V  S +IN  
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509

Query: 432 ---GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
              G + DA   F  +V + L P   +++ LMDG C + +    +++F  M    I+P+ 
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           + +  L+ G    G +   + LF +ML++G+ P  I Y+ II GLF+          F  
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 629

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           M  +G+A +   YN++L  L K    D A+ LF +L    ++ +IIT NT+I G
Sbjct: 630 MTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAG 683



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 223/473 (47%), Gaps = 49/473 (10%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  LM+   R    E A     Q+++ G   NI+  N +LK  C   +        D+L
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFC---EAKRTDEALDIL 169

Query: 240 LLVGPK----PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV--PDLIIYSILIDGL 293
           L   P+    P+V ++S L+ + C + K  +A  L  +M E   V  PD++ YS +IDG 
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGF 229

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA-------------------------- 327
           FK G + +  +L    + RG+  D V +SSV+ A                          
Sbjct: 230 FKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNN 289

Query: 328 ---------YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
                    Y   G    AV+ +  M     LP+V++ S+L+  LC+ G++ EA  +F  
Sbjct: 290 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 349

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GL 433
           + ++   P++ +Y+ +++G+   G L D   L+D M+  G+ PD    ++LI      G+
Sbjct: 350 MAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 409

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           +  A+  F +     + P++  + T++   CR+ +  D ++ F  M    + PD   +  
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI+G  + GSL  A  L  +++  G+  D++ +S+II+ L K   +    ++F L    G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + P   +Y++L++       ++ AL++F  +   G+EP+ + Y T++ GYC +
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKI 582



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 132/290 (45%), Gaps = 16/290 (5%)

Query: 337 AVQTYDRMLNGGFLPNVIS-----YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           AV  ++R  +    P V+S     Y+IL+    +  R   A   FGQ+L   L  +++  
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149

Query: 392 SSLIDGFCKSGKLRDGFS-LYDNMIKRGLKPDAVVCSLLI--------NGLMGDALRFFF 442
           + L+ GFC++ +  +    L     + G  PD    S+L+        +G   D LR   
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +       P++  ++T++DG  +         LF  M    I PD +T++ ++  +    
Sbjct: 210 EG-GAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++  A     QM+ +G+ P+  TY+ +I+G          + +FK M R+ + PD+   +
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 328

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
           +L+  L K   +  A  +F  +  +G  P++ +Y  ++ GY +   CL+D
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYAT-KGCLVD 377



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 137/301 (45%), Gaps = 14/301 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS--CLVDSNSVGQYYKLCR- 171
           +S +I N  ++G++ ++  IF    ++G++ +  +   LM   CLV     G+  K  R 
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLV-----GKMEKALRV 556

Query: 172 --AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
             AM   G      VY  L+NG  + G I+    + R+++Q+G  P+ +  N I+  L  
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            G+   A   F  +   G   N  T++ ++    K    ++A  L+  +  M++  ++I 
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 676

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
            + +I G+F+  R++E  +L  +    GL   VV +S ++   +  G V  A   +  M 
Sbjct: 677 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           N G  P+    + +++ L ++  +V A     ++  R      LT   L+D F   G  R
Sbjct: 737 NAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCR 796

Query: 406 D 406
           +
Sbjct: 797 E 797


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 251/523 (47%), Gaps = 22/523 (4%)

Query: 98  YNFFRLFRDSLGDFGCD--------YSFLIENYVRIGKIDESVEIFAYMSDMGIYLS-PD 148
           Y  F    D LG+   +         S ++  Y   G + ++VEI+ Y+ ++  Y S PD
Sbjct: 112 YRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVEL--YDSVPD 169

Query: 149 LV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHR 202
           ++    L+S LV S  +G   K+   M  +G  V  +    L+ G+  +G +E    +  
Sbjct: 170 VIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIE 229

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
               +G +PNIV  N I+   C  G I NA  +F  L L G  P + TF T+IN FCKE 
Sbjct: 230 GRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEG 289

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
               + +L + + E  L   +   + +ID  ++ G   +  E +   +    K DV  ++
Sbjct: 290 DFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYN 349

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            +++     G    AV   D     G +PN +SY+ LI+  C+      A  L  Q+  R
Sbjct: 350 ILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER 409

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DA 437
             +P ++TY  LI G   SG + D  ++   +I RG+ PDA + ++L++GL        A
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
              F + +   ++P+ +++ TL+DG  R     +  K+F L     +K DV+ H  +I+G
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
               G L  A+    +M +  L PD  TYS II G  K ++++  + +F+ ME+N   P+
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +  Y  L+N    + +   A + F ++  R L P+++TY T+I
Sbjct: 590 VVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/517 (24%), Positives = 237/517 (45%), Gaps = 30/517 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  Y ++G I+ +  +F  +   G   + +    +++            +L   ++
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302

Query: 175 GKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G  V  + +N ++    R G   +       +I     P++ T N ++ RLC  G+  
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A    D     G  PN ++++ LI A+CK  + + A +L   M E    PD++ Y ILI
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL  +G + +   + +  +DRG+  D  +++ +M      G    A   +  ML+   L
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+   Y+ LI G  + G   EA  +F   + + ++  ++ ++++I GFC+SG L +  + 
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG-CC 464
            + M +  L PD    S +I+G      M  A++ F    +    PN+  + +L++G CC
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602

Query: 465 R--LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS-LSSAILLFFQMLKRGLTP 521
           +   K A +T   F  M + ++ P+V+T+T LIR +A + S L  A+  +  M+     P
Sbjct: 603 QGDFKMAEET---FKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVP 659

Query: 522 DVITYSAIIHGLFK-----------GKN---ISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           + +T++ ++ G  K           G N    S+    F  M+ +G +   A YN  L  
Sbjct: 660 NEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVC 719

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L     +  A     ++  +G  PD +++  I+ G+C
Sbjct: 720 LCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 138/312 (44%), Gaps = 27/312 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ ++R G  DE+ ++F+   + G+ +       ++     S  + +       M 
Sbjct: 488 YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  +++G +++  +  A  + R + +    PN+VT   ++   C  G   
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK-LEKAFQLYNLMMEMDLVPDLIIYSIL 289
            A   F  + L    PNVVT++TLI +  KE+  LEKA   + LMM    VP+ + ++ L
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           + G  K    K     +L   D        +FS                + + RM + G+
Sbjct: 668 LQGFVKKTSGK-----VLAEPDGSNHGQSSLFS----------------EFFHRMKSDGW 706

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             +  +Y+  +  LC  G +  AC    +++ +   P  +++++++ GFC  G  +   +
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRN 766

Query: 410 L-YDNMIKRGLK 420
           + + N+ ++GL+
Sbjct: 767 MDFCNLGEKGLE 778



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 44/318 (13%)

Query: 331 IGDVGRAVQTYDRMLN---GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           I DV   V+ +D + +     F  N  + S  +K L +     E   + G +    ++ +
Sbjct: 74  IQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLT 133

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIK-RGLKPDAVVCSLLINGL-----MGDALRFF 441
               S ++  + +SG L     +YD +++     PD + C+ L++ L     +GDA + +
Sbjct: 134 HEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVY 193

Query: 442 FQ--------------------------SVRMTL---------IPNLFIFNTLMDGCCRL 466
            +                           V   L         IPN+  +NT++ G C+L
Sbjct: 194 DEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
               +   +F  + +    P + T   +I G   +G   ++  L  ++ +RGL   V   
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + II   ++             +  N   PD+A YN+L+N L KE   + A+    + + 
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373

Query: 587 RGLEPDIITYNTIICGYC 604
           +GL P+ ++Y  +I  YC
Sbjct: 374 KGLIPNNLSYAPLIQAYC 391


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 248/485 (51%), Gaps = 14/485 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS +I++ V+  K +ES ++   M  M    +PD+     +M     SN++ +  ++ + 
Sbjct: 13  YSSIIKSLVKEAKPEESYKVLEEM--MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQH 70

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G+      Y  L++GL + G ++ +  +  +++ RG  P++   + +++ L    +
Sbjct: 71  MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARR 130

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +ASSLFD ++  G  P+ + F  LI   C+  K++ A + +  M +    P++ +Y++
Sbjct: 131 VDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNV 190

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ GL  +G+L++ N L           DVV +++++DA      V    + ++ M   G
Sbjct: 191 LLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAG 250

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           ++PNVI++S LI GLC+ G L +A  +FG +L    +P+  TY++LI G C++ K+    
Sbjct: 251 YVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAR 310

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQ-SVRMTLIPNLFIFNTLMDG 462
            L++ M +  + PDAV  + LI      G M +A + + + S    L P +  FNTL+DG
Sbjct: 311 ELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDG 370

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+L +     +L   MG   +  D  T+ +LI G++    L  A+ ++ QM ++    D
Sbjct: 371 FCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLD 430

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            ++  + + GL K  NI     +F+   ++G  P+   + +L   LIK   ++ A KL  
Sbjct: 431 PVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490

Query: 583 QLTDR 587
               R
Sbjct: 491 PAKAR 495



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 195/401 (48%), Gaps = 31/401 (7%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +    N+ T + I+K L    +   +  + + ++  G  P+V  F+ ++  F +   +EK
Sbjct: 4   KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 63

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A ++Y  M+E    PD + Y ILI GL K G+L E  ++L   + RG    +  +SS++ 
Sbjct: 64  AREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVR 123

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A      V  A   +D M+ GG  P+ + +  LI GLCQ G++ +A   F Q+     +P
Sbjct: 124 ALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQP 183

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
           ++  Y+ L+ G C SG+L    +L+  M      PD V                      
Sbjct: 184 NVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVT--------------------- 222

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
                    +NTL+D  C+ +R  +  KLF  M      P+VIT + LI G+   G L  
Sbjct: 223 ---------YNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEK 273

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A+ +F  ML+ G  P+  TY+ +I GL + + +     +F+ M +  + PD   YN L+ 
Sbjct: 274 ALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 333

Query: 567 MLIKECNLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSL 606
              K  ++D A KL+ +++   GL+P I+T+NT+I G+C L
Sbjct: 334 GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 374



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 211/431 (48%), Gaps = 6/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++  L+++   E ++ +  +++  G  P++   N +++    +  +  A  ++  +
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G KP+ V++  LI+   K  KL+++ ++ + M+     P +  YS L+  L KA R+
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
              + L    +  G   D ++F  ++      G V  A + + +M   G  PNV  Y++L
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GLC  G+L +A  LF ++      P ++TY++L+D  CK+ ++ +G  L++ M   G 
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ +  S LI+GL     +  AL  F   +     PN + + TL+ G CR ++     +
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARE 311

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK-RGLTPDVITYSAIIHGL 533
           LF  M    I PD + +  LI G   +GS+  A  L+ +M    GL P ++T++ +I G 
Sbjct: 312 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 371

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K   +     +   M   G+A D   Y +L+  L +   LD AL+++ Q+ ++    D 
Sbjct: 372 CKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 431

Query: 594 ITYNTIICGYC 604
           ++  + + G C
Sbjct: 432 VSCVSFVGGLC 442



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 171/340 (50%), Gaps = 5/340 (1%)

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M + ++  ++  YS +I  L K  + +E  ++L   +  G   DV  F+ VM  +    +
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           + +A + Y  M+  G+ P+ +SY ILI GL + G+L E+  +  ++++R   PS+  YSS
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           L+    K+ ++    SL+D MI+ G  PD ++   LI GL     + DA   F Q  +  
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
             PN+ ++N L+ G C   +      LF  M  ++  PDV+T+  L+  +     +    
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            LF  M   G  P+VIT+S +IHGL +   +   L +F  M   G  P+   Y  L++ L
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            +   +  A +LF ++T   + PD + YN++I GYC   S
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGS 340



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 182/417 (43%), Gaps = 46/417 (11%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKM 90
           + +++  IL+ ++     TP++Q +            + L+  L ++   D AS +FD+M
Sbjct: 95  KLDESLKILSEMV-MRGQTPSMQAY------------SSLVRALAKARRVDHASSLFDEM 141

Query: 91  V------------------IQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGK 127
           +                   Q GK  +    F+  +   GC      Y+ L+      G+
Sbjct: 142 IRGGHHPDRLMFYELILGLCQAGKVKDASERFKQ-MPKHGCQPNVPVYNVLLHGLCSSGQ 200

Query: 128 IDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VY 181
           ++++  +FA M       SPD+V    L+  +  +  V +  KL  AMR  G+      +
Sbjct: 201 LEQANTLFAEMKSHSC--SPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             L++GL R G +E A  +   +++ G  PN  T   ++  LC   ++  A  LF+ +  
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQ 318

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME-MDLVPDLIIYSILIDGLFKAGRLK 300
               P+ V +++LI  +CK   +++A +LY  M     L P ++ ++ LIDG  K G+L 
Sbjct: 319 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 378

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
             NEL+     +GL  D   +  ++        +  A++ Y +M    FL + +S    +
Sbjct: 379 RANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFV 438

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            GLC+ G + +A  +F         P+  T+  L +   K G++ D   L +    R
Sbjct: 439 GGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 495


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 241/498 (48%), Gaps = 14/498 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ---RLMS-CLVDSNSVGQYYKLC 170
           Y+ +++  V     D++ +++  M   G+  SPDL     RL S CL     +    +L 
Sbjct: 91  YNAIMDALVDAAYHDQAHKVYVRMLAAGV--SPDLHTHTIRLRSFCLTARPHIA--LRLL 146

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           RA+  +G   Y  ++ GL   G   +A  +  Q++     PN+   NK+L  LC  G + 
Sbjct: 147 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVL 206

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   ++  G   N+ T++  I   C+  +L +A +L + M     VPD++ Y+ LI
Sbjct: 207 EAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAY-AVPDVVTYNTLI 265

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K    +E    L   +++G   D   +++++D Y  I  V  A +     +  GF+
Sbjct: 266 RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV 325

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y  LI GLC +G +  A  LF +   + ++P ++ Y+SL+ G C  G +     +
Sbjct: 326 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 385

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            + M + G  PD    +++INGL     + DA      ++    +P++F FNTL+DG C+
Sbjct: 386 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 445

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +    ++L   M  Y I PD IT+  ++ G+   G ++     F +M+ +G  P+ IT
Sbjct: 446 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 505

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ +I    +   +     +   M + G+ PD   +N L+    +  +L+ A  LF +L 
Sbjct: 506 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 565

Query: 586 DRGLEPDIITYNTIICGY 603
           ++G      T+NT+I  +
Sbjct: 566 EKGYSATADTFNTLIGAF 583



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 231/500 (46%), Gaps = 16/500 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   I  Y R G++ ++V+ F  M       +      +M  LVD+    Q +K+   M 
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN-IVTCNKILKRLCINGQI 229
             G       +   +           A  + R +  RG V    V C      L  +G  
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCG-----LYAHGHT 170

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A  LFD +L     PN+  F+ +++A CK   + +A  L   +++  +  +L  Y+I 
Sbjct: 171 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 230

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I GL +AGRL E   L+   +      DVV +++++           A+    RM+N G 
Sbjct: 231 IRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           LP+  +Y+ +I G C+   + EA  L    + +   P  +TY SLI+G C  G +     
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349

Query: 410 LYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L++    +G+KPD VV + L+      GL+  AL+   +       P++  +N +++G C
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 409

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           ++   +D   +     M    PDV T   LI G   +  L SA+ L  +M + G+ PD I
Sbjct: 410 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 469

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+++++GL K   ++     F+ M   G  P+   YN+L+    +   ++ A K+  ++
Sbjct: 470 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 529

Query: 585 TDRGLEPDIITYNTIICGYC 604
           +  GL PD +++NT+I G+C
Sbjct: 530 SQEGLHPDAVSFNTLIYGFC 549



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 232/493 (47%), Gaps = 30/493 (6%)

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           VIQ G + N F             Y+  I      G++ E+V +   +  M  Y  PD+V
Sbjct: 215 VIQRGMSINLF------------TYNIWIRGLCEAGRLPEAVRL---VDGMRAYAVPDVV 259

Query: 151 --QRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQ 203
               L+  L   +   +     R M  +G C+     Y  +++G  +  +++ A  + + 
Sbjct: 260 TYNTLIRGLCKKSMPQEAMHYLRRMMNQG-CLPDDFTYNTIIDGYCKISMVQEATELLKD 318

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
            + +GFVP+ VT   ++  LC  G +  A  LF+     G KP++V +++L+   C +  
Sbjct: 319 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 378

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +  A Q+ N M E    PD+  Y+I+I+GL K G + +   ++  A+ +G   DV  F++
Sbjct: 379 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 438

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D Y     +  A+Q  +RM   G  P+ I+Y+ ++ GLC+ G++ E    F +++++ 
Sbjct: 439 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 498

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDAL 438
             P+ +TY+ LI+ FC+S K+ +   +   M + GL PDAV  + LI     NG +  A 
Sbjct: 499 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 558

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F +            FNTL+             K+F  M     + D  T+ VLI G 
Sbjct: 559 LLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 618

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
               ++  A +   +M+K+G  P + T+  +I+ L     +   + +  +M + GV P++
Sbjct: 619 CKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 678

Query: 559 AIYNVLLNMLIKE 571
              + +LN   KE
Sbjct: 679 V--DTILNADKKE 689



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 209/433 (48%), Gaps = 10/433 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +M+ L+     + A  ++ +++  G  P++ T    L+  C+  +   A  L   L
Sbjct: 90  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 149

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
               P    V + T++           A QL++ M+   + P+L  ++ ++  L K G +
Sbjct: 150 ----PHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 205

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   LL   + RG+ +++  ++  +      G +  AV+  D M     +P+V++Y+ L
Sbjct: 206 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTL 264

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+GLC++    EA     +++ +   P   TY+++IDG+CK   +++   L  + + +G 
Sbjct: 265 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 324

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V    LINGL  +     AL  F ++    + P++ ++N+L+ G C        ++
Sbjct: 325 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 384

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M      PD+ T+ ++I G+   G++S A ++    + +G  PDV T++ +I G  
Sbjct: 385 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 444

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +   L + + M   G+APD   YN +LN L K   ++   + F ++  +G  P+ I
Sbjct: 445 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 504

Query: 595 TYNTIICGYCSLN 607
           TYN +I  +C  N
Sbjct: 505 TYNILIENFCRSN 517



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 172/382 (45%), Gaps = 35/382 (9%)

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++ +A   F+ + L    P    ++ +++A    A  ++A ++Y  M+   + PDL  +
Sbjct: 67  GRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTH 126

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +I +       R      LL     RG     V + +V+      G    A Q +D+ML+
Sbjct: 127 TIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLH 182

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               PN+ +++ ++  LC++G ++EA  L G+V+ R +  +L TY+  I G C++G+L +
Sbjct: 183 THVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPE 242

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
              L D M                               R   +P++  +NTL+ G C+ 
Sbjct: 243 AVRLVDGM-------------------------------RAYAVPDVVTYNTLIRGLCKK 271

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
               + +     M      PD  T+  +I G      +  A  L    + +G  PD +TY
Sbjct: 272 SMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 331

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            ++I+GL    ++   L +F   +  G+ PDI +YN L+  L  +  +  AL++  ++ +
Sbjct: 332 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 391

Query: 587 RGLEPDIITYNTIICGYCSLNS 608
            G  PDI TYN +I G C + +
Sbjct: 392 EGCHPDIQTYNIVINGLCKMGN 413


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 248/502 (49%), Gaps = 13/502 (2%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G  +  L   Y R   I +++ + A M D+    S      L+  +  ++ +   Y   +
Sbjct: 170 GLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIK 229

Query: 172 AMRG-KGFCVYEFLMNGLLRKGVIENA---FHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                +  C    L++GL  +  +E+A    H   +V+     P+IV+ N I+ + C  G
Sbjct: 230 VSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVG----PSIVSINTIMSKFCKVG 285

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            I  A S F +++  G   +  +++ L++  C    +++A    + M +  + PD++ Y+
Sbjct: 286 LIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYN 345

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L  G    G +    +++   L +GL  D+V +++++  +  +G++  A++     L+ 
Sbjct: 346 TLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSR 405

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GF  NVI Y++L+  LC+ GR+ EA  LF ++   RLEP  + YS LI G CK G ++  
Sbjct: 406 GFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRA 465

Query: 408 FSLYDNM-IKRGLKPD----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           + LY+ M +KR         AV+  L  NG + +A  +F    RM L+ ++ ++N ++DG
Sbjct: 466 YQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG 525

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             RL    + ++L+  M    I P V+T   LI G   +G L  A  +   +  +GL P 
Sbjct: 526 YVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPS 585

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V+TY+ +++   +  N+    H    ME N V P    Y VL+  L ++  +  +L+L  
Sbjct: 586 VVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLE 645

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
            +  +GL PD +TYNTII  +C
Sbjct: 646 YMYAKGLLPDSVTYNTIIQCFC 667



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 166/647 (25%), Positives = 288/647 (44%), Gaps = 65/647 (10%)

Query: 1   VLLKFKNLLT---VWRSINKCYCSESKTH--------ISDLQFNQA----NAILANLIKT 45
           +L KF+N  +   VW  +   Y      H        + DL F  +    N++L N+  T
Sbjct: 159 LLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHT 218

Query: 46  NNPTPAIQFFKWTHNCVSSPNIAQLIHVLL-QSDMRDVASHVFDK-------------MV 91
           +         K +    S    + LIH L  QS + D  S + D              ++
Sbjct: 219 DIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIM 278

Query: 92  IQFGK------TYNFFRLF-RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
            +F K        +FF L  ++ L      Y+ L+      G +DE++     M   G+ 
Sbjct: 279 SKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGV- 337

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGL--------------LR 190
             PD+V          N++ + + L   M G    V + L+ GL               +
Sbjct: 338 -EPDVVTY--------NTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
            G IE A  + ++ + RGF  N++  N +L  LC  G+I  A +LFD +  +  +P+ + 
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           +S LI+  CKE  +++A+QLY  M      P       ++ GLFK G + E      T  
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
              L  DVV+++ ++D YV +  +  A+Q Y +M+  G  P+V++++ LI G C++G L+
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           EA  +   + ++ L PS++TY++L++ +C+ G +++ F     M    + P  V  ++LI
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 431 NGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
            GL     M ++L+         L+P+   +NT++   C+ K  T  ++L+ +M ++N  
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P  +T+ VLI  +   G L     +   +  R +T   +TY  II        +S  L  
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGY 748

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           F  M   G    I  Y+ ++N L K   +  A   F  +   G+ PD
Sbjct: 749 FNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPD 795



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 219/462 (47%), Gaps = 40/462 (8%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +M+   + G+I+ A      +++ G + +  + N +L  LC+ G +  A    D +   G
Sbjct: 277 IMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHG 336

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +P+VVT++TL   F     +  A ++   M+   L PDL+ Y+ LI G  + G ++E  
Sbjct: 337 VEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEAL 396

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L    L RG KL+V+ ++ ++     +G +  A+  +D M      P+ I YSILI GL
Sbjct: 397 KLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGL 456

Query: 364 CQQGRLVEACGLFGQVLIRRLEP-----------------------------------SL 388
           C++G +  A  L+ Q+ ++R  P                                    +
Sbjct: 457 CKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDV 516

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDAL--RFFFQS 444
           + Y+ +IDG+ +   + +   LY  MI+RG+ P  V  + LING    GD +  R   + 
Sbjct: 517 VLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEV 576

Query: 445 VRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
           +R+  L+P++  + TLM+  C +    +       M    + P  +T+TVLI+G+  Q  
Sbjct: 577 IRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNK 636

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  ++ L   M  +GL PD +TY+ II    KGK I+  L ++ +M  +   P    Y V
Sbjct: 637 MHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKV 696

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L+N L    +L    ++   + DR +    +TY TII  +C+
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCA 738



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 155/308 (50%), Gaps = 4/308 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+ YVR+  I E+++++  M + GI  S      L++       + +  K+   +R
Sbjct: 519 YNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIR 578

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  LMN     G ++  FH   ++     VP  VT   ++K LC   ++ 
Sbjct: 579 LKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMH 638

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            +  L + +   G  P+ VT++T+I  FCK  ++ KA QLYN+M+  +  P  + Y +LI
Sbjct: 639 ESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLI 698

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + L   G LK+ + ++++  DR + L  V + +++ A+   G V +A+  +++ML  GF+
Sbjct: 699 NALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFV 758

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            ++  YS +I  LC++G + EA   F  +L   + P      ++++ F + G     F  
Sbjct: 759 ISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEF 818

Query: 411 YDNMIKRG 418
              ++K G
Sbjct: 819 LAMVVKSG 826



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 185/398 (46%), Gaps = 43/398 (10%)

Query: 215 TCNKILKRLCINGQIGNASS-LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           T + ++  LC   ++ +A S L D   +VGP  ++V+ +T+++ FCK   ++ A   + L
Sbjct: 239 TTSILIHGLCEQSKLEDAISFLHDSNKVVGP--SIVSINTIMSKFCKVGLIDVARSFFCL 296

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M++  L+ D   Y+IL+ GL  AG                           MD  +G  D
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGS--------------------------MDEALGFTD 330

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
                     M   G  P+V++Y+ L KG    G +  A  +  ++L++ L P L+TY++
Sbjct: 331 ---------DMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTT 381

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMT 448
           LI G C+ G + +   L    + RG K + +  ++L++     G + +AL  F +   + 
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           L P+  +++ L+ G C+        +L+  M +    P       ++ G+   G++S A 
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEAR 501

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
             F    +  L  DV+ Y+ +I G  +   I+  + ++  M   G+ P +  +N L+N  
Sbjct: 502 NYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGF 561

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +  +L  A K+   +  +GL P ++TY T++  YC +
Sbjct: 562 CRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEV 599


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 247/523 (47%), Gaps = 23/523 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++    +  ++D+++E+   MS+  I L+   +  ++  L+DS  + +  ++ R  R
Sbjct: 148 YNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENR 207

Query: 175 GKGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
            +   V    L+ G   +G ++ A  + R +      P+ V+   +L  LC  G++  A 
Sbjct: 208 REPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAV 267

Query: 234 SLFDVLLLVGPKPNVVT------FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            LF    L     +  +      ++ +I   C+  ++++A Q++  M E ++ PD   Y 
Sbjct: 268 RLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYG 327

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ILIDGL KAG+L +   L    L  G+    V ++S++           A + +  M   
Sbjct: 328 ILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR 387

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+ ++Y+++I   C++G L EAC L  +++     P ++TY++++DG CKS ++ + 
Sbjct: 388 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 447

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL--------------MGDALRFFFQSVRMTLIPNL 453
             L++ M + G  P+    + +I GL              + +A R   +      +P++
Sbjct: 448 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDV 507

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             ++TL+ G C + R  D   L   M     KP V+T   LI G+   G +  A  +   
Sbjct: 508 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M+  G +PDV+TY+ ++HG  +         +   M   G+AP++  Y  L++ L K   
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
           L  A  +F Q+   G  P++ TY  +I G+CS     +DG  K
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ--VDGGLK 668



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 234/495 (47%), Gaps = 38/495 (7%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKL------ 169
           L+E +   G++D++ E+   M D     +PD V    ++  L  +  V +  +L      
Sbjct: 218 LLEGFCSRGQVDKARELLRAMPDE--ECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDREL 275

Query: 170 ---------CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
                      ++RG     Y  ++ GL +   I+ A  M  ++ +R   P+  +   ++
Sbjct: 276 PSSSSSSSSPPSLRG-----YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILI 330

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             L   G++ +A +LF  LL  G  P+ V +++LI+  C     + A +L+  M      
Sbjct: 331 DGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCP 390

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P  + Y+++ID   K G L+E  +L+   ++ G   DVV +++VMD       V  A+  
Sbjct: 391 PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 450

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC--GLFGQV--LIRRLE-----PSLLTY 391
           ++ M   G  PN  S++ +I GLCQQ ++ +AC  G   +   L++R+      P ++TY
Sbjct: 451 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTY 510

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
           S+LI G C   ++ D   L ++M+KR  KP  V  + LI+GL     + +A       V 
Sbjct: 511 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 570

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
               P++  +NTL+ G CR  +     +L   M    + P+V+T+T L+ G+     L  
Sbjct: 571 SGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE 630

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +F QM   G  P++ TY+A+I G      +  GL +F  M   G++PD  +Y  L  
Sbjct: 631 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAA 690

Query: 567 MLIKECNLDAALKLF 581
            L K      AL++ 
Sbjct: 691 ELCKSGRSARALEIL 705



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 231/506 (45%), Gaps = 47/506 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    +  +IDE+V++F  M++  +  SPD                          
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNV--SPDSWS----------------------- 325

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++GL + G + +A ++ ++++  G  P+ V    ++  LC+     +A  
Sbjct: 326 ------YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 379

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF  +   G  P+ VT++ +I+A CK   LE+A  L   M+E   VPD++ Y+ ++DGL 
Sbjct: 380 LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 439

Query: 295 KAGRLKEG----NELLLTALDRGLKLDVVVF-----SSVMDAYVGIGDVGRAVQTYDRML 345
           K+ R++E     NE+         +    +       S +D     G +  A +   RM 
Sbjct: 440 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMT 499

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           + G +P+V++YS LI GLC   R+ +A  L   ++ R+ +P+++T ++LI G CK+G+++
Sbjct: 500 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 559

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLM 460
           +   + D M+  G  PD V  + L++G         A       V   L PN+  +  L+
Sbjct: 560 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 619

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
            G C+  R  +   +F  M      P++ T+T LI G  S G +   + LF +M+  G++
Sbjct: 620 SGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGIS 679

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERN--GVAPDIAIYNVLLNMLIKECNLDAAL 578
           PD + Y  +   L K    +  L + +    +    A    +Y   ++ L++   ++ AL
Sbjct: 680 PDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMAL 739

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYC 604
                +   G  P      +++ G C
Sbjct: 740 GFVRDMVRGGQLPAPERCASLVAGLC 765



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/582 (23%), Positives = 246/582 (42%), Gaps = 98/582 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I+ +  +G+  E+V+IF+ M +      PD+   L+  L          K+ + M 
Sbjct: 13  FTSVIQGWCNVGRTFEAVKIFSLMEECHSPY-PDVYNVLIDSLSKRQETEAVKKMVQVMV 71

Query: 175 GKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            +G C      +  ++ GL + G ++ A  +  ++  R   P   T + +   LC+ G +
Sbjct: 72  DRG-CFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSM 130

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME---------MDLV 280
             A  L +++    P  N   ++ ++ A CK A+++ A +L   M E         +D V
Sbjct: 131 ERAFQLLEIM----PVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSV 186

Query: 281 -----------------------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
                                  P L+  ++L++G    G++ +  ELL    D     D
Sbjct: 187 LVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPD 246

Query: 318 VVVFSSVMDAYVGIGDV-----------------------------------------GR 336
            V + +V+D     G V                                           
Sbjct: 247 EVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDE 306

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           AVQ +++M      P+  SY ILI GL + G+L +A  LF ++L   + PS + Y+SLI 
Sbjct: 307 AVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIH 366

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIP 451
           G C +    D   L+ +M +RG  P  V  +++I+     G++ +A     + +    +P
Sbjct: 367 GLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVP 426

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ---------G 502
           ++  +NT+MDG C+  R  + + LF  M      P+  +H  +I G+  Q         G
Sbjct: 427 DVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRG 486

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A  L  +M   G  PDV+TYS +I GL     +    H+ + M +    P +   N
Sbjct: 487 KLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 546

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L++ L K   +  A ++   +   G  PD++TYNT++ G+C
Sbjct: 547 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 588



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 191/400 (47%), Gaps = 61/400 (15%)

Query: 74  LLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVE 133
           L Q+D  D A  +F+KM        N   +  DS       Y  LI+   + GK++++  
Sbjct: 298 LCQNDRIDEAVQMFEKM--------NERNVSPDSW-----SYGILIDGLAKAGKLNDARN 344

Query: 134 IFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLL 189
           +F  +   G+  S      L+  L  +NS     +L   M  +G       Y  +++   
Sbjct: 345 LFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASC 404

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           ++G++E A  + +++I+ G VP++VT N ++  LC + ++  A  LF+ +  +G  PN  
Sbjct: 405 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 464

Query: 250 TFSTLI---------NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF------ 294
           + +T+I         +  C+  KL++AF+L   M +   VPD++ YS LI GL       
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524

Query: 295 -----------------------------KAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
                                        KAGR+KE  E+L   +  G   DVV +++++
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
             +   G   RA +    M+  G  PNV++Y+ L+ GLC+  RL EACG+F Q+      
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 644

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           P+L TY++LI GFC +G++  G  L+  M+  G+ PD VV
Sbjct: 645 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 684



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 68/322 (21%)

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
           I+   + GK+DE+  +   M+D G    PD+V                            
Sbjct: 479 IDQACQRGKLDEAFRLLKRMTDDGHV--PDVV---------------------------- 508

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
             Y  L++GL     +++A H+   +++R   P +VT N ++  LC  G+I  A  + D 
Sbjct: 509 -TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           ++  G  P+VVT++TL++  C+  + E+A +L + M+   L P+++ Y+ L+ GL KA R
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L E   +       G   ++  +++++  +   G V   ++ +  M+  G  P+ + Y  
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 687

Query: 359 LIKGLCQQGRLVEACGL------------FGQVLIR----------RLE----------- 385
           L   LC+ GR   A  +            +G  + R          ++E           
Sbjct: 688 LAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVR 747

Query: 386 ----PSLLTYSSLIDGFCKSGK 403
               P+    +SL+ G CKSG+
Sbjct: 748 GGQLPAPERCASLVAGLCKSGQ 769



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 154/366 (42%), Gaps = 37/366 (10%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           N ++  L K++    A+  F        +PN      +I  L Q    D A         
Sbjct: 432 NTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA--------C 483

Query: 93  QFGKTYNFFRLFRDSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           Q GK    FRL +  + D G       YS LI     I ++D++  +   M  +     P
Sbjct: 484 QRGKLDEAFRLLK-RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM--VKRQCKP 540

Query: 148 DLVQR--LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMH 201
            +V +  L+  L  +  + +  ++  AM   G       Y  L++G  R G  E A  + 
Sbjct: 541 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 600

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
             ++ RG  PN+VT   ++  LC   ++  A  +F  +   G  PN+ T++ LI  FC  
Sbjct: 601 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 660

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR-------LKEGNELLLTALDRGL 314
            +++   +L+  M+   + PD ++Y  L   L K+GR       L+EG E L     R  
Sbjct: 661 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL-----RSE 715

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
                V+   +D  +  G +  A+     M+ GG LP     + L+ GLC+ G+  EA  
Sbjct: 716 AWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARA 775

Query: 375 LFGQVL 380
           +  +++
Sbjct: 776 VLEEIM 781



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER-NGVAPDIAIYNVLLNMLIKEC 572
           M ++G+ P  + ++++I G          + +F LME  +   PD+  YNVL++ L K  
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQ 58

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             +A  K+   + DRG  PD  T+ TI+CG C
Sbjct: 59  ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLC 90



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 3/134 (2%)

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM-YNIKPDVITHTVLIRGIASQGSLSSA 507
           + P   +F +++ G C + R  + VK+F LM   ++  PDV  + VLI  ++ +    + 
Sbjct: 6   IFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQETEAV 63

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             +   M+ RG  PD  T++ I+ GL K   +     +   M    + P  A  + L + 
Sbjct: 64  KKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHE 123

Query: 568 LIKECNLDAALKLF 581
           L    +++ A +L 
Sbjct: 124 LCLRGSMERAFQLL 137


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 222/426 (52%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL  +  +  A  +  ++++ G  PN+VT N I+  +C +G    A  L   +
Sbjct: 137 TFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKM 196

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                K +V T+ST+I++ C++  ++ A  L+  M    +   L+ Y+ L+ GL KAG+ 
Sbjct: 197 DERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKW 256

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +G +LL     R +  +V+ F+ ++D +V  G +  A + Y  M+  G  PN I+Y+ L
Sbjct: 257 NDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSL 316

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G C Q RL EA  +   ++     P ++T++SLI G+CK  ++ +G  L+  + KRGL
Sbjct: 317 MDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGL 376

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             + V  S+L+ G         A   F + V + ++P++  +  L+DG C   +    ++
Sbjct: 377 VANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALE 436

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  +    +  D++ +T++I G+   G +  A  LF  +  +G+ P+V+TY+ +I GL 
Sbjct: 437 IFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 496

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  ++S    + + ME +G  P+   YN L+   +++ +L A+ KL  ++   G   D  
Sbjct: 497 KKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 556

Query: 595 TYNTII 600
           +   +I
Sbjct: 557 SIKMVI 562



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 227/433 (52%), Gaps = 20/433 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG+ + G    A  + R++ +R    ++ T + I+  LC +G I  A SLF  +
Sbjct: 172 TYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 231

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G K ++VT+++L+   CK  K     QL   M    ++P++I +++LID   K G+L
Sbjct: 232 ETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKL 291

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E NEL    + +G+  + + ++S+MD Y     +  A    D M+     P++++++ L
Sbjct: 292 QEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSL 351

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKG C+  R+ E   LF ++  R L  + +TYS L+ GFC+SGKL     L+  M+  G+
Sbjct: 352 IKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGV 411

Query: 420 KPDAVVCSLLINGL-----MGDALRFF--FQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            PD +   +L++GL     +  AL  F   Q  +M L  ++ ++  +++G C+  +  D 
Sbjct: 412 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNL--DIVMYTIIIEGMCKGGKVEDA 469

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             LF  +    +KP+V+T+TV+I G+  +GSLS A +L  +M + G  P+  TY+ +I  
Sbjct: 470 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRA 529

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML------IKECNLDAALKLFGQLTD 586
             +  +++    + + M+  G + D +   ++++ML       KE      +K F     
Sbjct: 530 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAVWWFKEPRRSPGVKRF----- 584

Query: 587 RGLEPDIITYNTI 599
           RG +  ++ +NTI
Sbjct: 585 RGTQAYLMPFNTI 597



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 216/409 (52%), Gaps = 5/409 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A+ +  +V++ G+ P+  T N ++  LC+  ++  A  L   ++  G +PNVVT+++++N
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK      A  L   M E ++  D+  YS +ID L + G +     L      +G+K 
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            +V ++S++      G     VQ    M +   +PNVI++++LI    ++G+L EA  L+
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            +++ + + P+ +TY+SL+DG+C   +L +  ++ D M++    PD V  + LI G    
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + + ++ F +  +  L+ N   ++ L+ G C+  +     +LF  M    + PDV+T+
Sbjct: 359 KRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTY 418

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L+ G+   G L  A+ +F  + K  +  D++ Y+ II G+ KG  +    ++F  +  
Sbjct: 419 GILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPC 478

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            GV P++  Y V+++ L K+ +L  A  L  ++ + G EP+  TYNT+I
Sbjct: 479 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLI 527



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 149/285 (52%), Gaps = 7/285 (2%)

Query: 330 GIGDVGR--AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           GI D+    A+  +  M+    LP+++ +S    G+    +         ++ +  +  +
Sbjct: 40  GIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHN 99

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           + T + +I+ FC+  K    +S+   ++K G +PD    + LINGL     + +A+    
Sbjct: 100 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVA 159

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           + V     PN+  +N++++G C+    +  + L   M   N+K DV T++ +I  +   G
Sbjct: 160 RMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDG 219

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            + +AI LF +M  +G+   ++TY++++ GL K    + G+ + K M    + P++  +N
Sbjct: 220 CIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFN 279

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           VL+++ +KE  L  A +L+ ++  +G+ P+ ITYN+++ GYC  N
Sbjct: 280 VLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQN 324



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 92/188 (48%), Gaps = 8/188 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQ----YYK 168
           YS L++ + + GK++ + E+F  M  +G+   PD++    L+  L D+  + +    +  
Sbjct: 383 YSILVQGFCQSGKLEIAEELFQEMVSLGVL--PDVMTYGILLDGLCDNGKLEKALEIFED 440

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           L ++       +Y  ++ G+ + G +E+A+++   +  +G  PN++T   ++  LC  G 
Sbjct: 441 LQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A+ L   +   G +PN  T++TLI A  ++  L  + +L   M       D     +
Sbjct: 501 LSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 560

Query: 289 LIDGLFKA 296
           +ID L  A
Sbjct: 561 VIDMLSSA 568


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 225/405 (55%), Gaps = 5/405 (1%)

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           ++ G+ PN+VT + ++K +C  G++ +A  LFD +   G + +++ +  LINA  K  + 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
            +A +L+  M+      +   Y ++ID L K G   +G ++    ++ G+  +V+V+SS+
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           ++    +G +  AV  +D M++ G   NVI+Y+ LI   C+ G   EA   F Q++   +
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
            P ++T+++LID   K GK+++ + +++ MIK+G  P+ V  + L+NGL     M  A+R
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F   V   +  ++  +NTL++G C   +  + + LF  M    + P + T+T+L++ + 
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G + +A  LF  M   G +P + TY+ ++ GL K   I   + +F+ ++     P I 
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIR 360

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           IY++L+  + +    ++A+++F ++   GL P+I+TYN +I G C
Sbjct: 361 IYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLC 405



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 237/451 (52%), Gaps = 9/451 (1%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK----GFCVY 181
           GK+ +++E+F  M+  G      L   L++ L  +    +  +L R M  +     F  Y
Sbjct: 23  GKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTY 82

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +++ L + G+      M R++I  G  PN++  + ++  LC  G++  A +LFD ++ 
Sbjct: 83  GLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVS 142

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G K NV+T+++LI+A C+    ++A + ++ M+   ++PD++ ++ LID L K G+++E
Sbjct: 143 QGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQE 202

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             ++    + +G   ++V ++S+++       +  AV+ ++ M+  G   +VISY+ LI 
Sbjct: 203 AYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLIN 262

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C  G+  EA  LF ++    L PS+ TY+ L+    ++G++R    L++NM   G  P
Sbjct: 263 GYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSP 322

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
                ++L++GL     + +A+  F     +   P++ I++ L+ G  + +R    +++F
Sbjct: 323 SLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIF 382

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             +    + P+++T+ ++I G+  +G L  A  LF QM + G   D I+++ II G  + 
Sbjct: 383 DEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQE 442

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             +   +   K M     +P+ ++  +L+N+
Sbjct: 443 NQVQKAMEFLKRMREKNFSPNDSVTLMLVNL 473



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 212/430 (49%), Gaps = 5/430 (1%)

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           K+ R+       +Y +L+N L +      A  +HR+++      N  T   ++  LC +G
Sbjct: 34  KMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDG 93

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
                  +F  ++ +G  PNV+ +S+LIN  C+  KL +A  L++ M+   +  ++I Y+
Sbjct: 94  LAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYN 153

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI    + G  KE        +  G+  DVV F++++D     G V  A + ++ M+  
Sbjct: 154 SLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQ 213

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PN+++Y+ L+ GLC   ++  A  LF  ++ R ++  +++Y++LI+G+C SGK  + 
Sbjct: 214 GEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEA 273

Query: 408 FSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            +L+  M    L P     ++L+     NG +  A   F         P+L  +  L+DG
Sbjct: 274 MTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDG 333

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+     + + +F  +     KP +  +++LI G+       SA+ +F ++   GL P+
Sbjct: 334 LCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPN 393

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           ++TY+ +I+GL K   +     +F  ME +G   D   +N ++   ++E  +  A++   
Sbjct: 394 IVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLK 453

Query: 583 QLTDRGLEPD 592
           ++ ++   P+
Sbjct: 454 RMREKNFSPN 463



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 148/266 (55%), Gaps = 5/266 (1%)

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +  G+ PN+++ S L+KG+C +G++++A  LF ++     +  +L Y  LI+   K+ + 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 405 RDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           R    L+  M+      +      V+ SL  +GL    L+ F + + M + PN+ ++++L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           ++G CR+ +  + V LF  M    IK +VIT+  LI      G    A   F QM+  G+
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PDV+T++ +I  L K   +     +F+LM + G AP+I  YN LLN L     +D A++
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCS 605
           LF  + +RG++ D+I+YNT+I GYC+
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCT 266



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 185/383 (48%), Gaps = 49/383 (12%)

Query: 101 FRLFRDSLGDFGCD----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
            ++FR+ +    C     YS LI    R+GK+ E+V +F  M   GI  +   V    S 
Sbjct: 99  LKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKAN---VITYNSL 155

Query: 157 LVDSNSVGQYYKLCRA---MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +  S   G + +  R    M G+G       +  L++ L +KG ++ A+ +   +I++G 
Sbjct: 156 IHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGE 215

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PNIVT N +L  LC++ Q+ +A  LF+V++  G K +V++++TLIN +C   K E+A  
Sbjct: 216 APNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMT 275

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL--------------LTALDRGL- 314
           L+  M   +L P +  Y+IL+  L++ GR++   EL                T L  GL 
Sbjct: 276 LFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLC 335

Query: 315 --------------------KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
                               K  + ++S ++           A++ +D +   G +PN++
Sbjct: 336 KNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIV 395

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+I+I GLC++G+L+EA  LF Q+     E   ++++ +I GF +  +++        M
Sbjct: 396 TYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRM 455

Query: 415 IKRGLKPDAVVCSLLINGLMGDA 437
            ++   P+  V  +L+N    DA
Sbjct: 456 REKNFSPNDSVTLMLVNLYAADA 478


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 244/505 (48%), Gaps = 43/505 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+      +IDE+ E+F  +   G   SP++V    ++  L+ +  +    K    
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAG--CSPNVVAYTAVIDGLLKAGRIEDGLKNFEE 168

Query: 173 MRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           M G   CV     Y  +++GL +  ++ +A  +  Q++Q+G VP+ +T   ++       
Sbjct: 169 MSGSS-CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 227

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  L DV+L  GP+P  VT+ ++++ FCK   + +A ++   M E    P L I++
Sbjct: 228 KMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFT 287

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+      GR +E  ++L     RG   DV++++S++D     G V  A   +D M+  
Sbjct: 288 SLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 347

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRD 406
           G  P+ ++Y  +I+   + G  VEA G   +++ +  + P    Y+SL+DG+ K  ++  
Sbjct: 348 GCAPDALTYGTIIQNFSKIGN-VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 406

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
            F +YD M+  G+KP+AV                               FN LM G  + 
Sbjct: 407 AFGVYDRMVASGIKPNAVT------------------------------FNVLMHGLFKD 436

Query: 467 KRATDTVKLFM-LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            +      LF  ++    + P ++++T+LI G+   G +S A L F +M+ RG+ P+  T
Sbjct: 437 GKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHT 496

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+++I+ L K   I     + + M + GV PD+  Y+ L+  LI    +D A  +F ++ 
Sbjct: 497 YTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMM 556

Query: 586 DRGLEPDIITYNTIICGYCSLNSCL 610
            RG  P+ +TY  +  G+ +    L
Sbjct: 557 KRGCAPNEVTYKVLRRGFRAAGRAL 581



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 210/432 (48%), Gaps = 38/432 (8%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P IV+ N ++  L    ++  A   F+ ++  G +P+V+ F+TLI+ FCK  + +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAG------------------------------ 297
            +L N  ++    PD+ +Y+ +I G  KAG                              
Sbjct: 62  HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 298 --RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
             R+ E  EL       G   +VV +++V+D  +  G +   ++ ++ M     +P   +
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+++I GLC+   L +AC +F Q++ +   P  +TY++LIDGF K+ K+ +   L D M+
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 416 KRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            +G +P AV    +++G     ++ +A     Q       P LFIF +L+       RA 
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  ++   M      PDVI +T LI  + S G +  A  +F  M+++G  PD +TY  II
Sbjct: 301 EAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 360

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
               K  N+     + +LM ++GV PD   YN L++  +K   +D A  ++ ++   G++
Sbjct: 361 QNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIK 420

Query: 591 PDIITYNTIICG 602
           P+ +T+N ++ G
Sbjct: 421 PNAVTFNVLMHG 432



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 197/406 (48%), Gaps = 44/406 (10%)

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G +P +V+++T+I+      K+++A++ +N M++    PD+I ++ LI G  KAG+ + 
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
           G++LL  AL R  + DV +++SV+  Y   GD+      Y R +      +VISY+ +IK
Sbjct: 61  GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIK 116

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GL    R+ EAC LF ++      P+++ Y+++IDG  K+G++ DG   ++ M      P
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
                +++I+GL     + DA + F Q V+   +P+   + TL+DG  +  +  +  KL 
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236

Query: 477 MLMGMYNIKPDVITHTVLIRGIA-----------------------------------SQ 501
            +M     +P  +T+  ++ G                                     S+
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A  +  +M  RG  PDVI Y+++I  LF    +    H+F  M   G APD   Y
Sbjct: 297 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 356

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             ++    K  N++AA ++   +   G+ PD   YN+++ GY  L 
Sbjct: 357 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 402



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/556 (24%), Positives = 250/556 (44%), Gaps = 66/556 (11%)

Query: 112 GCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMS--CLVDSNS 162
           GC+     Y+ +I     I K+DE+ + F  M D G    PD++    L+   C      
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNG--CEPDVIAFTTLIHGFCKAGQPQ 59

Query: 163 VGQYY--KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           VG     +  +  R   F +Y  +++G  + G ++  +   R V  +  + ++++   ++
Sbjct: 60  VGHKLLNQALKRFRPDVF-LYTSVIHGYCKAGDLDTGYF--RAVTPKASL-DVISYTTVI 115

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
           K L  + +I  A  LF+ L   G  PNVV ++ +I+   K  ++E   + +  M     V
Sbjct: 116 KGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCV 175

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P    Y+++IDGL KA  L +  ++    + +G   D + +++++D +     +  A + 
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQ----------------------------------- 365
            D ML  G  P  ++Y  ++ G C+                                   
Sbjct: 236 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 295

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +GR  EA  +  ++  R   P ++ Y+SLID    +G++ +   ++D+MI++G  PDA+ 
Sbjct: 296 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 355

Query: 426 CSLLINGL--------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
              +I            G+ L    +S    + P+ F +N+LMDG  +L+R      ++ 
Sbjct: 356 YGTIIQNFSKIGNVEAAGEILELMAKS---GVGPDCFAYNSLMDGYVKLERVDQAFGVYD 412

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML-KRGLTPDVITYSAIIHGLFKG 536
            M    IKP+ +T  VL+ G+   G    A  LF +ML K  + P +++Y+ +I GL K 
Sbjct: 413 RMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKA 472

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +S     F+ M   G+ P+   Y  L+  L K   +  A KL   +   G+ PD+  Y
Sbjct: 473 GRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAY 532

Query: 597 NTIICGYCSLNSCLID 612
           + +I G   ++S ++D
Sbjct: 533 SALITGL--IDSSMVD 546



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 154/332 (46%), Gaps = 40/332 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++  + ++  I+E+ E+ A M + G      +   L+S  +      + Y++   M 
Sbjct: 251 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 310

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP----------------NIV 214
            +G      +Y  L++ L   G +  A H+   +I++G  P                N+ 
Sbjct: 311 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 370

Query: 215 TCNKILKRLCING-------------------QIGNASSLFDVLLLVGPKPNVVTFSTLI 255
              +IL+ +  +G                   ++  A  ++D ++  G KPN VTF+ L+
Sbjct: 371 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 430

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPD-LIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           +   K+ K ++AF L+  M+E + VP  L+ Y+ILIDGL KAGR+ E        +DRG+
Sbjct: 431 HGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGI 490

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             +   ++S++ +    G +  A +  + M+  G  P+V +YS LI GL     +  A  
Sbjct: 491 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 550

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
           +F +++ R   P+ +TY  L  GF  +G+  D
Sbjct: 551 VFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 582



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 142/317 (44%), Gaps = 58/317 (18%)

Query: 64  SPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DY 115
           +P++     LI +L  +     A HVFD M+                  + GC      Y
Sbjct: 315 APDVILYTSLIDLLFSTGRVPEARHVFDSMI------------------EKGCAPDALTY 356

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
             +I+N+ +IG ++ + EI   M+  G+   PD                     C A   
Sbjct: 357 GTIIQNFSKIGNVEAAGEILELMAKSGV--GPD---------------------CFA--- 390

Query: 176 KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                Y  LM+G ++   ++ AF ++ +++  G  PN VT N ++  L  +G+   A SL
Sbjct: 391 -----YNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSL 445

Query: 236 FDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           F  +L      P +V+++ LI+   K  ++ +AF  +  M++  ++P+   Y+ LI  L 
Sbjct: 446 FKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLA 505

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           KAGR+ E  +L+   +  G+  DV  +S+++   +    V  A   +  M+  G  PN +
Sbjct: 506 KAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEV 565

Query: 355 SYSILIKGLCQQGRLVE 371
           +Y +L +G    GR ++
Sbjct: 566 TYKVLRRGFRAAGRALD 582


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/572 (25%), Positives = 272/572 (47%), Gaps = 33/572 (5%)

Query: 62  VSSPNIAQLIHVLLQSDMRDVASHVF--DKMV---IQFGKTYNFFRLFRDS-LGDFGCD- 114
            +SP  A+L+    ++  R  A  V+   K++    + G+T +  R+ R +       D 
Sbjct: 88  TTSPRAARLVD---RATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDV 144

Query: 115 --YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLC 170
             Y+ L+  Y R G++D +  + A M      ++PD      ++  L D   VG+   L 
Sbjct: 145 FAYNTLVAGYCRYGQLDAARRLIASMP-----VAPDAYTYTPIIRGLCDRGRVGEALSLL 199

Query: 171 RAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M  +G       Y  L+  + +      A  +  ++  +G  PNIVT N I+  +C  
Sbjct: 200 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 259

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++ +A    + L   G +P+ V+++T++   C   + E   +L+  MME + +P+ + +
Sbjct: 260 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 319

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            +L+    + G ++   ++L      G   +  + + V++     G V  A Q  + M +
Sbjct: 320 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 379

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P+ ISY+ ++KGLC+  R  +A  L  +++ +   P+ +T+++ I   C+ G +  
Sbjct: 380 YGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQ 439

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              L + M + G + + V  + L+NG      +  AL  F+    M   PN   + TL+ 
Sbjct: 440 ATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS---MPCKPNTITYTTLLT 496

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C  +R     +L   M   +  P+V+T  VL+     +G +  AI L  QM++ G TP
Sbjct: 497 GLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTP 556

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           ++ITY+ ++ G+ K  N    L +   +  NGV+PDI  Y+ ++ +L +E  ++ A+K+F
Sbjct: 557 NLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMF 616

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
             + D G+ P  + YN I+   C    C  DG
Sbjct: 617 HIVQDLGMRPKAVIYNKILLALC--KRCNTDG 646



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 235/497 (47%), Gaps = 12/497 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I      G++ E++ +   M   G   S      L+  +  S   GQ  ++   MR
Sbjct: 179 YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 238

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  ++NG+ R+G +++A     ++   GF P+ V+   +LK LC   +  
Sbjct: 239 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 298

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +   LF  ++     PN VTF  L+  FC+   +E+A Q+   M       +  + +I+I
Sbjct: 299 DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVI 358

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + + K GR+ +  + L      G   D + +++V+           A +    M+     
Sbjct: 359 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 418

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN ++++  I  LCQ+G + +A  L  Q+     E +++TY++L++GFC  G++     L
Sbjct: 419 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 478

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + +M     KP+ +  + L+ GL     +  A     + ++    PN+  FN L+   C+
Sbjct: 479 FYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 535

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                + ++L   M  +   P++IT+  L+ GI    +   A+ L   ++  G++PD++T
Sbjct: 536 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVT 595

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           YS+II  L +   +   + MF +++  G+ P   IYN +L  L K CN D A+  F  + 
Sbjct: 596 YSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV 655

Query: 586 DRGLEPDIITYNTIICG 602
             G  P+ +TY T+I G
Sbjct: 656 SNGCMPNELTYITLIEG 672



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 160/328 (48%), Gaps = 13/328 (3%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           + +I    + G++D++   F ++++MG Y  SPD +    ++  L  +       +L + 
Sbjct: 355 NIVINTICKQGRVDDA---FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 411

Query: 173 MRGKGFCVYEFLMNG----LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  K     E   N     L +KG+IE A  +  Q+ + G   NIVT N ++   C+ G+
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 471

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  LF  +     KPN +T++TL+   C   +L+ A +L   M++ D  P+++ +++
Sbjct: 472 VDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 528

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+    + G + E  EL+   ++ G   +++ +++++D      +   A++    +++ G
Sbjct: 529 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 588

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++++YS +I  L ++ R+ EA  +F  V    + P  + Y+ ++   CK        
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 648

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD 436
             +  M+  G  P+ +    LI GL  +
Sbjct: 649 DFFAYMVSNGCMPNELTYITLIEGLANE 676



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 156/338 (46%), Gaps = 13/338 (3%)

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           + + G+  + F+ F +++G +GC      Y+ +++   R  + +++ E+   M       
Sbjct: 361 ICKQGRVDDAFQ-FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 419

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMH 201
           +       +  L     + Q   L   M   G       Y  L+NG   +G +++A  + 
Sbjct: 420 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 479

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
             +  +   PN +T   +L  LC   ++  A+ L   +L     PNVVTF+ L++ FC++
Sbjct: 480 YSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 536

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
             +++A +L   MME    P+LI Y+ L+DG+ K    +E  ELL   +  G+  D+V +
Sbjct: 537 GLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTY 596

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           SS++        V  A++ +  + + G  P  + Y+ ++  LC++     A   F  ++ 
Sbjct: 597 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 656

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
               P+ LTY +LI+G      L++   L   +  RG+
Sbjct: 657 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 156/629 (24%), Positives = 295/629 (46%), Gaps = 77/629 (12%)

Query: 63  SSPNIAQLIHVLLQSDMRDVASHVF------DKMVIQFGKTYNFFRLFRDSLGDFGCDYS 116
           SSP+    +  L  + M+ + S +        KMV +  + Y   +  +D +       +
Sbjct: 94  SSPSHLYTLFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMK--KDGVLPSVASLN 151

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR-- 174
             +E+ V   + ++++++F+ + + G+     +  + +   V    + +  +L   M+  
Sbjct: 152 LFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRG 211

Query: 175 --GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
               G  VY  ++ GL ++  +++A  +  +++ R   PN +T N ++   C  GQ+  A
Sbjct: 212 GVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEA 271

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
            ++ + + +   +P ++TF++L+N  C+   +E+A ++   M     VPD   Y+ L DG
Sbjct: 272 FNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDG 331

Query: 293 LFKAGRL------------------------------KEGN-----ELLLTALDRGLKLD 317
             K G +                              KEGN     E+L   L+ GL   
Sbjct: 332 HLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPV 391

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
            V F+++++ Y  +GD+ +A  T ++M   G  PN ++Y+ L+K  C+   + EA     
Sbjct: 392 GVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIK 451

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD- 436
           +++ + + P++ TY++LIDG+ +S      F + + M K+GLKP+ +    LIN L  D 
Sbjct: 452 KMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDA 511

Query: 437 ----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
               A       V   ++PN  I+N L+DG C   +  D  + F  M    I P ++T+ 
Sbjct: 512 NILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYN 571

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           +LI G+  +G +  A  L  ++ ++GL+ DVITY+++I G     N+   L +++ M+++
Sbjct: 572 ILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKS 631

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY--------- 603
           G+ P +  Y+ L+    KE  L    K++ ++    L PD + YN +I  Y         
Sbjct: 632 GIKPTLNTYHRLIAGCGKE-GLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKA 690

Query: 604 CSLNS---------------CLIDGYFKS 617
           CSL+S               CLI G+FK 
Sbjct: 691 CSLHSAMEAQGIQPDKMTYNCLILGHFKE 719



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 243/510 (47%), Gaps = 12/510 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y ++G+++E+  I   M    +  +      L++ L  +  + +  ++   M 
Sbjct: 255 YNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEME 314

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF      Y  L +G L+ G ++ +  +  + +++G      TC+ +L  LC  G + 
Sbjct: 315 VYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNME 374

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +    L  G  P  V F+T++N +C+   + KA+     M  + L P+ + Y+ L+
Sbjct: 375 KAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLV 434

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
               +   ++E  + +   +++G+  +V  +++++D Y       R  Q  + M   G  
Sbjct: 435 KKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLK 494

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNVISY  LI  LC+   ++EA  + G ++ R + P+   Y+ LIDG C +GKL+D F  
Sbjct: 495 PNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRF 554

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +D M+ R + P  V  ++LINGL     + +A     +  R  L  ++  +N+L+ G   
Sbjct: 555 FDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSS 614

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                  ++L+  M    IKP + T+  LI G   +G L     ++ +ML+  L PD + 
Sbjct: 615 AGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVI 673

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+A+IH   +  ++     +   ME  G+ PD   YN L+    KE  +     L   + 
Sbjct: 674 YNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMK 733

Query: 586 DRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
            RGL P   TY+ +I G+C L     DG +
Sbjct: 734 IRGLIPKTETYDILIVGHCKLKD--FDGAY 761



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 239/510 (46%), Gaps = 21/510 (4%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           L++ L ++ M + A  V ++M + +G   + F             Y+ L + +++ G +D
Sbjct: 293 LLNGLCRAQMMEEAQRVLEEMEV-YGFVPDRF------------TYTTLFDGHLKCGNVD 339

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLM 185
            S+ +       G+ +       L++ L    ++ +  ++ +     G       +  ++
Sbjct: 340 ASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIV 399

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           NG  + G I  A+    ++   G  PN VT N ++K+ C    +  A      ++  G  
Sbjct: 400 NGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVL 459

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNV T++TLI+ + +    ++ FQ+   M +  L P++I Y  LI+ L K   + E   +
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVI 519

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L   + RG+  +  +++ ++D     G +  A + +D M+    +P +++Y+ILI GLC+
Sbjct: 520 LGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCK 579

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G+++EA  L  ++  + L   ++TY+SLI G+  +G ++    LY+ M K G+KP    
Sbjct: 580 KGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNT 639

Query: 426 CSLLINGLMGDAL----RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
              LI G   + L    + + + ++M L+P+  I+N L+              L   M  
Sbjct: 640 YHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEA 699

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             I+PD +T+  LI G   +G +     L   M  RGL P   TY  +I G  K K+   
Sbjct: 700 QGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDG 759

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
               ++ M  NG  P ++I + L+  L +E
Sbjct: 760 AYVWYREMFENGFTPSVSICDNLITGLREE 789



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 132/333 (39%), Gaps = 77/333 (23%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ Y R    D   +I   M   G  L P+++    L++CL    ++ +   +   
Sbjct: 465 YNTLIDGYGRSCLFDRCFQILEEMEKKG--LKPNVISYGCLINCLCKDANILEAEVILGD 522

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G      +Y  L++G    G +++AF    +++ R  VP +VT N ++  LC  G+
Sbjct: 523 MVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGK 582

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM-------------- 274
           +  A +L   +   G   +V+T+++LI+ +     ++KA +LY  M              
Sbjct: 583 VMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHR 642

Query: 275 --------------------MEMDLVPDLIIYSILID----------------------- 291
                               ++M+LVPD +IY+ LI                        
Sbjct: 643 LIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGI 702

Query: 292 ------------GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
                       G FK GR+ +   L+     RGL      +  ++  +  + D   A  
Sbjct: 703 QPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYV 762

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            Y  M   GF P+V     LI GL ++GR  +A
Sbjct: 763 WYREMFENGFTPSVSICDNLITGLREEGRSHDA 795


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 216/426 (50%), Gaps = 6/426 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++  +RK   + A+ + +  +     P+ +T + ++   C       A  L D +   G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+   ++T+I   C   +++ A   Y   M+    P +I Y+IL+D L K+ R+ + +
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYR-DMQRHCAPSVITYTILVDALCKSARISDAS 122

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +L   ++ G   +VV ++++++ +  +G++  AV  +++ML     P+V +Y+ILI G 
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+Q R  +   L  +++    EP+ +TY++L+D   KSGK  D F+L   M++R  KP  
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              +L+I+     G +  A   F        +P+++ +N ++ G CR  R  D  +L   
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      PDV+T+  ++ G+     +  A  ++  +   G   DV+T S +I GL K + 
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 362

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     + + MERNG APD+  Y +L++   K   LD +L  F ++ D+G  P +ITY+ 
Sbjct: 363 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 422

Query: 599 IICGYC 604
           +I   C
Sbjct: 423 VIDKLC 428



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 227/448 (50%), Gaps = 14/448 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG 175
           L+  +VR  K  E+ ++F   + +    SPD +    L++    +    Q Y+L   M  
Sbjct: 4   LLSAFVRKKKAQEAYDLFK--NHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +G      VY  ++ GL   G +++A  +H + +QR   P+++T   ++  LC + +I +
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRHCAPSVITYTILVDALCKSARISD 120

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           AS + + ++  G  PNVVT++TLIN FCK   +++A  L+N M+E    PD+  Y+ILID
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G  K  R ++G +LL   +  G + + + ++++MD+ V  G    A      ML     P
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  +++++I   C+ G+L  A  LF  +  R   P + TY+ +I G C++ ++ D   L 
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 412 DNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRM-TLIPNLFIFNTLMDGCCRL 466
           + M + G  PD V  + +++GL      D     ++ +R      ++   +TL+DG C+ 
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           +R  D  KL   M      PDV+ +T+LI G      L  ++  F +ML +G  P VITY
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 420

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGV 554
           S +I  L K   +  G  + K M   GV
Sbjct: 421 SIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 202/415 (48%), Gaps = 6/415 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NG  +    + A+ +  ++ +RG VP+    N I+K LC NG++ +A   +  +
Sbjct: 35  TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM 94

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P+V+T++ L++A CK A++  A  +   M+E    P+++ Y+ LI+G  K G +
Sbjct: 95  QR-HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 153

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   L    L+     DV  ++ ++D Y          +    M+  G  PN I+Y+ L
Sbjct: 154 DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL 213

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  L + G+ ++A  L   +L R  +PS  T++ +ID FCK G+L   + L+  M  RG 
Sbjct: 214 MDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 273

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    +++I+G      + DA +   +       P++  +N+++ G C+  +  +  +
Sbjct: 274 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 333

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           ++ ++       DV+T + LI G+     L  A  L  +M + G  PDV+ Y+ +IHG  
Sbjct: 334 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 393

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           K   +   L  F  M   G  P +  Y+++++ L K   +     L   + +RG+
Sbjct: 394 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 158/354 (44%), Gaps = 66/354 (18%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L++AF ++ K ++A+ L+   +     PD I YS LI+G  KA                 
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKAR---------------- 47

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
                              D  +A +  D M   G +P+   Y+ +IKGLC  GR V++ 
Sbjct: 48  -------------------DFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGR-VDSA 87

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +  + + R   PS++TY+ L+D  CKS ++ D   + ++MI+ G  P            
Sbjct: 88  LVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAP------------ 135

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
                             N+  +NTL++G C+L    + V LF  M   +  PDV T+ +
Sbjct: 136 ------------------NVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 177

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI G   Q        L  +M+K G  P+ ITY+ ++  L K        ++ ++M R  
Sbjct: 178 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             P    +N++++M  K   LD A +LF  +TDRG  PDI TYN +I G C  N
Sbjct: 238 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 291



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 162/311 (52%), Gaps = 8/311 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  + ++G +DE+V +F  M +     SPD+     L+             KL + 
Sbjct: 140 YNTLINGFCKLGNMDEAVVLFNQMLENSC--SPDVFTYNILIDGYCKQERPQDGAKLLQE 197

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G    F  Y  LM+ L++ G   +AF++ + +++R   P+  T N ++   C  GQ
Sbjct: 198 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ 257

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  LF ++   G  P++ T++ +I+  C+  +++ A QL   M E    PD++ Y+ 
Sbjct: 258 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 317

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++ GL KA ++ E  E+     + G  LDVV  S+++D       +  A +    M   G
Sbjct: 318 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 377

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V++Y+ILI G C+  +L ++   F ++L +   P+++TYS +ID  CKS ++RDG 
Sbjct: 378 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 437

Query: 409 SLYDNMIKRGL 419
            L   M++RG+
Sbjct: 438 MLLKTMLERGV 448



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 85/188 (45%), Gaps = 29/188 (15%)

Query: 457 NTLMDGCCRLKRATDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           N L+    R K+A +   LF   L G+    PD IT++ LI G         A  L  +M
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGL--CSPDSITYSTLINGFCKARDFQQAYRLLDEM 59

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            KRG+ P    Y+ II GL     +   L  ++ M+R+  AP +  Y +L++ L K   +
Sbjct: 60  EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARI 118

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSL---------------NSC---------L 610
             A  +   + + G  P+++TYNT+I G+C L               NSC         L
Sbjct: 119 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178

Query: 611 IDGYFKSQ 618
           IDGY K +
Sbjct: 179 IDGYCKQE 186


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 245/506 (48%), Gaps = 50/506 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  LI  +  +G ++E++ ++  M  +    + ++V   +  LV        +K+   M 
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMV---LDGLVKKGRFDTMWKVYGDMV 185

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L++G  R+G    AF +  ++I++   P +V    +++ LC   +I 
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+F  +   G  PN+ T++T+++ +CK A ++KA +LY  M+   L+P+++ + ILI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K   +    + L+     G+  ++ V++ ++D Y   G++  A+  +  +     L
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +YSILIKGLC   R+ EA GL  ++  +   P+ +TY++LIDG+CK G +     +
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M ++G++P                              N+  F+TL+DG C+  +  
Sbjct: 426 CSQMTEKGIEP------------------------------NIITFSTLIDGYCKAGKME 455

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + L+  M +  + PDV+ +T LI G    G+   A  L  +M + GL P+V T S +I
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 531 HGLFKGKNISVGLHMF-------------KLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            GL K   IS  + +F               ++R+  +P+  +Y  L+  L  +  +  A
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKA 575

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGY 603
            K F  +   GL PD+ T   II G+
Sbjct: 576 SKFFSDMRCSGLRPDVFTCIVIIQGH 601



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 159/381 (41%), Gaps = 78/381 (20%)

Query: 101 FRLFRDSLGDFGCDYSFLIENYVRIG-------KIDESVEIFAYMSDMGIY-LSPDLVQR 152
             L+++ LGD       L+ N V  G       K DE V    ++ DM  + + P++   
Sbjct: 283 LELYQEMLGDG------LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF-- 334

Query: 153 LMSCLVD--------SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQV 204
           + +CL+D        S ++  + ++ +         Y  L+ GL     +E A  + +++
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
            ++GF+PN VT N ++   C  G +  A  +   +   G +PN++TFSTLI+ +CK  K+
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E A  LY  M+   L+PD++ Y+ LIDG FK G  KE   L     + GL  +V   S +
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 325 MD----------------AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
           +D                A  G    G      DR L     PN + Y+ LI+GLC  GR
Sbjct: 515 IDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCS---PNHVMYTALIQGLCTDGR 571

Query: 369 LVEACGLFGQVLIRRLEPSLLT-----------------------------------YSS 393
           + +A   F  +    L P + T                                   Y  
Sbjct: 572 IFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRV 631

Query: 394 LIDGFCKSGKLRDGFSLYDNM 414
           L  G+ +SG L+      +++
Sbjct: 632 LAKGYEESGYLKSALRCSEDL 652


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 245/506 (48%), Gaps = 50/506 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  LI  +  +G ++E++ ++  M  +    + ++V   +  LV        +K+   M 
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMV---LDGLVKKGRFDTMWKVYGDMV 185

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L++G  R+G    AF +  ++I++   P +V    +++ LC   +I 
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+F  +   G  PN+ T++T+++ +CK A ++KA +LY  M+   L+P+++ + ILI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILI 305

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K   +    + L+     G+  ++ V++ ++D Y   G++  A+  +  +     L
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +YSILIKGLC   R+ EA GL  ++  +   P+ +TY++LIDG+CK G +     +
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M ++G++P                              N+  F+TL+DG C+  +  
Sbjct: 426 CSQMTEKGIEP------------------------------NIITFSTLIDGYCKAGKME 455

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + L+  M +  + PDV+ +T LI G    G+   A  L  +M + GL P+V T S +I
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 531 HGLFKGKNISVGLHMF-------------KLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            GL K   IS  + +F               ++R+  +P+  +Y  L+  L  +  +  A
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKA 575

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGY 603
            K F  +   GL PD+ T   II G+
Sbjct: 576 SKFFSDMRCSGLRPDVFTCIVIIQGH 601



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 135/580 (23%), Positives = 229/580 (39%), Gaps = 113/580 (19%)

Query: 101 FRLFRDSLGDFGCDYSFLIENYVRIG-------KIDESVEIFAYMSDMGIY-LSPDLVQR 152
             L+ + LGD       L+ N V  G       K DE V    ++ DM  + + P++   
Sbjct: 283 LELYXEMLGDG------LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF-- 334

Query: 153 LMSCLVD--------SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQV 204
           + +CL+D        S ++  + ++ +         Y  L+ GL     +E A  + +++
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
            ++GF+PN VT N ++   C  G +  A  +   +   G +PN++TFSTLI+ +CK  K+
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E A  LY  M+   L+PD++ Y+ LIDG FK G  KE   L     + GL  +V   S +
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 325 MD----------------AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
           +D                A  G    G      DR L     PN + Y+ LI+GLC  GR
Sbjct: 515 IDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCS---PNHVMYTALIQGLCTDGR 571

Query: 369 LVEACGLFGQVLIRRLEPSLLT-----------------------------------YSS 393
           + +A   F  +    L P + T                                   Y  
Sbjct: 572 IFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRV 631

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS-------------------------- 427
           L  G+ +SG L+   S        G++P   V S                          
Sbjct: 632 LAKGYEESGYLKSALSF----CGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSS 687

Query: 428 -LLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
            L   G+    L ++F ++     P+  +      G    +R    ++LF  M M + +P
Sbjct: 688 YLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQP 747

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           D++T TV +   A  G+L     +   +  RGL  D+   +++I+   K   I     +F
Sbjct: 748 DIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLF 807

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
              ++     D+  +  ++         + AL+LF ++ +
Sbjct: 808 DGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKE 843



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/246 (21%), Positives = 104/246 (42%), Gaps = 29/246 (11%)

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +L  P P+ +           + +  KA QL+  M   D  PD++  ++ +      G L
Sbjct: 706 ILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGAL 765

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
             G  +      RGL  D+ + +S+++ Y   G++G A     R+ +G    +V +++ +
Sbjct: 766 DMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTA----RRLFDGTQKKDVTTWTSM 821

Query: 360 IKGLCQQGRLVEACGLF----------------GQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           I G    G+  EA  LF                G+     + P+ +T+  ++     +G 
Sbjct: 822 IVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGL 881

Query: 404 LRDGFSLYDNMIKR-GLKP-----DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
           + +G   + +M +   L+P       +V  L   GL+ +A  F    ++M + PN  ++ 
Sbjct: 882 VEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFI---LKMPVRPNAVVWR 938

Query: 458 TLMDGC 463
           TL+  C
Sbjct: 939 TLLGAC 944



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 62/308 (20%), Positives = 120/308 (38%), Gaps = 48/308 (15%)

Query: 192  GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
            G ++    +H  +  RG   ++   N ++      G+IG A  LFD       K +V T+
Sbjct: 763  GALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGT----QKKDVTTW 818

Query: 252  STLINAFCKEAKLEKAFQLYNLMMEMD----------------LVPDLIIYSILIDGLFK 295
            +++I       + E+A QL+  M E +                ++P+ + +  ++     
Sbjct: 819  TSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSH 878

Query: 296  AGRLKEGNELLLT-ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            AG ++EG +   +   D  L+  +  F  ++D    +   G   + Y+ +L     PN +
Sbjct: 879  AGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDL---LCRAGLLTEAYEFILKMPVRPNAV 935

Query: 355  SYSILIKGLCQQGR-----------LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
             +  L+     QG              EA     +  +  LEPS +  + ++     +  
Sbjct: 936  VWRTLLGACSLQGDSNGNGNSNIKIXSEA-----RRQLLELEPSHVGDNVIMSNLYAAKG 990

Query: 404  LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            + D   L  N IK+   P    CS +  G+  D   F     +   +P ++    ++D  
Sbjct: 991  MWDKKMLVRNQIKQRRDPG---CSSIEVGI--DIKEFVAADDQHPCMPQIY---EILDHL 1042

Query: 464  CRLKRATD 471
             R  RA+D
Sbjct: 1043 TRTMRASD 1050


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/587 (25%), Positives = 274/587 (46%), Gaps = 37/587 (6%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQF- 94
           N +L++L+K N    + Q F    +C  +P++                 ++F  MV  F 
Sbjct: 166 NFLLSSLVKANEVKMSYQVFDIMCHCGVTPDV-----------------YLFSTMVNAFC 208

Query: 95  --GKTYNFFRLFRD----SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
             G+  +   LFR      +      Y+ +I    + G++DE+ +    M    +   P 
Sbjct: 209 TGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERV--KPS 266

Query: 149 LVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHR 202
           LV    L++ LV      +   + + M  +G+     VY  L++G  R G I  A  +  
Sbjct: 267 LVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRD 326

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            +I  G  PN VTCN +++  C + Q+ +A  L + +L  G   N  TF+++I+  C + 
Sbjct: 327 DMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKC 386

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           + + A      M+  +  P+  + ++L+ GL + G+  E  EL    L++G   + V  +
Sbjct: 387 RFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSN 446

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++      G    A +    ML  G + + ISY+ LI   C++G++ E   L  +++ R
Sbjct: 447 ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR 506

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            ++P + TY+ L+ G C  GK+ +   L+    K G  PDA    ++I+G      + + 
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            + F + V M +  N  ++ TL+   C      +  +L   M    I     T++ LI G
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHG 626

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +++ G + SA  L  +M K GL+P+V+ Y+A+I G  K   +     + + M  N V P+
Sbjct: 627 LSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPN 686

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              Y +++N   K  N+ AA KL  ++  +G+ PD +TYN +  G+C
Sbjct: 687 KITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFC 733



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 244/503 (48%), Gaps = 13/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           +S ++  +   G++D+++E+F  M  +G+  +P++V    ++  L  +  + + ++    
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKMEKVGV--APNVVTYNNIIHGLCKNGRLDEAFQFKEK 257

Query: 173 MRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +        Y  L+NGL++    + A  + +++  RG+ PN V  N ++   C  G 
Sbjct: 258 MEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGN 317

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  + D ++  G  PN VT ++LI  +CK  ++E A  L   M+    V +   ++ 
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTS 377

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I  L    R       ++  L R  K +  + + ++      G    A++ + R+L  G
Sbjct: 378 VIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F  N ++ + LI GLC+ G   EA  L  ++L R L    ++Y++LI   CK GK+ +GF
Sbjct: 438 FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGF 497

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL--MG---DALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L + M++RG++PD    ++L++GL  MG   +A   + +  +    P+ + +  ++DG 
Sbjct: 498 KLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGY 557

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  R  +  KLF  M    I+ + + +  LIR     G++  A  L   M  RG+    
Sbjct: 558 CKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTS 617

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TYS++IHGL     +     +   M + G++P++  Y  L+    K   +     +  +
Sbjct: 618 ATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQE 677

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           ++   + P+ ITY  +I G+C L
Sbjct: 678 MSINNVHPNKITYTIMINGHCKL 700



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 256/550 (46%), Gaps = 34/550 (6%)

Query: 51  AIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKM--------VIQFGKTYN 99
           AI+ F+       +PN+     +IH L ++   D A    +KM        ++ +G   N
Sbjct: 216 AIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLIN 275

Query: 100 -FFRLFR--------DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
              +L R          + D G       Y+ LI+ Y RIG I  +++I   M   GI  
Sbjct: 276 GLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISP 335

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMH 201
           +      L+     SN +     L   M   G  +    +  +++ L  K   ++A    
Sbjct: 336 NSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFI 395

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            +++ R F PN      ++  LC NG+   A  L+  LL  G   N VT + LI+  C+ 
Sbjct: 396 MEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEA 455

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
              E+A +L   M+E  LV D I Y+ LI    K G+++EG +L    + RG++ D+  +
Sbjct: 456 GSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTY 515

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           + ++     +G +  A   +      G  P+  +Y I+I G C+  R+ E   LF +++ 
Sbjct: 516 NMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVT 575

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
            ++E + + Y +LI  +C++G +R+ F L D+M  RG+   +   S LI+GL     +  
Sbjct: 576 MKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDS 635

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A +   +  +  L PN+  +  L+ G C+L +      +   M + N+ P+ IT+T++I 
Sbjct: 636 ANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMIN 695

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G    G++ +A  L  +M ++G+ PD +TY+A+ +G  K   +   L +  LM   G++ 
Sbjct: 696 GHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISL 755

Query: 557 DIAIYNVLLN 566
           D   Y  L++
Sbjct: 756 DDITYTTLID 765



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 202/415 (48%), Gaps = 5/415 (1%)

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
           F +   +  +G  P++ TCN +L  L    ++  +  +FD++   G  P+V  FST++NA
Sbjct: 147 FELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNA 206

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           FC   +++ A +L+  M ++ + P+++ Y+ +I GL K GRL E  +         +K  
Sbjct: 207 FCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPS 266

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           +V +  +++  V +     A      M + G+ PN + Y+ LI G C+ G +  A  +  
Sbjct: 267 LVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRD 326

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLING 432
            ++   + P+ +T +SLI G+CKS ++     L + M+  G   +     +V+  L +  
Sbjct: 327 DMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKC 386

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
               AL F  + +     PN  +   L+ G C+  + ++ ++L+  +       + +T  
Sbjct: 387 RFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSN 446

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G+   GS   A  L  +ML+RGL  D I+Y+ +I    K   +  G  + + M R 
Sbjct: 447 ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR 506

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           G+ PD+  YN+LL+ L     ++ A  L+ +    G  PD  TY  +I GYC  N
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKAN 561



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 160/356 (44%), Gaps = 39/356 (10%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + L+    + GK  E++E++  + + G   +      L+  L ++ S  +  KL + M  
Sbjct: 411 TLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLE 470

Query: 176 KGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +G  +    Y  L+    ++G +E  F +  ++++RG  P++ T N +L  LC  G+I  
Sbjct: 471 RGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEE 530

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L+      G  P+  T+  +I+ +CK  ++E+  +L+  M+ M +  + ++Y  LI 
Sbjct: 531 AGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIR 590

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
              + G ++E   L      RG+      +SS++     IG V  A Q  D M   G  P
Sbjct: 591 AYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSP 650

Query: 352 NV-----------------------------------ISYSILIKGLCQQGRLVEACGLF 376
           NV                                   I+Y+I+I G C+ G +  A  L 
Sbjct: 651 NVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLL 710

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            ++  + + P  +TY++L +GFCK GK+ +   + D M   G+  D +  + LI+G
Sbjct: 711 NEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 112/218 (51%), Gaps = 4/218 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I+ Y +  +++E  ++F  M  M I  +  +   L+    ++ ++ + ++L   MR
Sbjct: 550 YGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMR 609

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L++GL   G++++A  +  ++ + G  PN+V    ++   C  GQ+ 
Sbjct: 610 SRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMH 669

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
              S+   + +    PN +T++ +IN  CK   ++ A +L N M +  +VPD + Y+ L 
Sbjct: 670 KVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALT 729

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           +G  K G+++E  ++       G+ LD + +++++D +
Sbjct: 730 NGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGW 767


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 227/434 (52%), Gaps = 5/434 (1%)

Query: 176 KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           + F  Y  ++   L      +A  +  +++    +P+I+   ++L  +    +     SL
Sbjct: 46  RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F+ + ++G  P + T + +++  C  ++  +A      MM++   PDL+ ++ L++G   
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH 165

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
             R+++   L    L  G K +VV +++++        +  AV+ +++M   G  PNV++
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ L+ GLC+ GR  +A  L   ++ RR+EP+++T+++LID F K GKL +   LY+ MI
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285

Query: 416 KRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +  + PD      LIN     GL+ +A + F+   R    PN  I+ TL+ G C+ KR  
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D +K+F  M    +  + IT+TVLI+G    G    A  +F QM  R   PD+ TY+ ++
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL     +   L +F+ M +  +  +I  Y +++  + K   ++ A  LF  L  +G++
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465

Query: 591 PDIITYNTIICGYC 604
           P++ITY T+I G+C
Sbjct: 466 PNVITYTTMISGFC 479



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 202/394 (51%), Gaps = 5/394 (1%)

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           KIL+    N Q  +A  LF  ++   P P+++ F+ L++   K  + +    L+  M  +
Sbjct: 53  KILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + P L   +I++  +  + +    +  L   +  G + D+V F+S+++ Y     +  A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +  +D++L  GF PNV++Y+ LI+ LC+   L  A  LF Q+      P+++TY++L+ G
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPN 452
            C+ G+  D   L  +M+KR ++P+ +  + LI+     G + +A   +   ++M++ P+
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +F + +L++G C      +  ++F LM      P+ + +T LI G      +   + +F+
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M ++G+  + ITY+ +I G        V   +F  M      PDI  YNVLL+ L    
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            ++ AL +F  +  R ++ +I+TY  II G C L
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 188/392 (47%), Gaps = 36/392 (9%)

Query: 141 MGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVI 194
           M +   PDLV    L++     N +     L   + G GF      Y  L+  L +   +
Sbjct: 145 MKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHL 204

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
            +A  +  Q+   G  PN+VT N ++  LC  G+ G+A+ L   ++    +PNV+TF+ L
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I+AF K  KL +A +LYN+M++M + PD+  Y  LI+GL   G L E  ++       G 
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             + V++++++  +     V   ++ +  M   G + N I+Y++LI+G C  GR   A  
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
           +F Q+  RR  P + TY+ L+DG C +GK+     +++ M KR +  + V  +++I G+ 
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM- 443

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
                                        C+L +  D   LF  +    +KP+VIT+T +
Sbjct: 444 -----------------------------CKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           I G   +G +  A  LF +M + G  P+   Y
Sbjct: 475 ISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 176/352 (50%), Gaps = 43/352 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           ++ L+  Y    +I++++ +F  +  MG    P++V    L+ CL  +  +    +L   
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMG--FKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  L+ GL   G   +A  + R +++R   PN++T   ++      G+
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L++V++ +   P+V T+ +LIN  C    L++A Q++ LM      P+ +IY+ 
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY--VGIGDVGRAV-------- 338
           LI G  K+ R+++G ++      +G+  + + ++ ++  Y  VG  DV + V        
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393

Query: 339 -----QTYDRMLNG----GFLP----------------NVISYSILIKGLCQQGRLVEAC 373
                +TY+ +L+G    G +                 N+++Y+I+I+G+C+ G++ +A 
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            LF  +  + ++P+++TY+++I GFC+ G + +  SL+  M + G  P+  V
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 132/249 (53%), Gaps = 10/249 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD------LVQRL-MSCLVDSNSVGQYY 167
           ++ LI+ +V++GK+ E+ E++  M  M +Y  PD      L+  L M  L+D  +   +Y
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVY--PDVFTYGSLINGLCMYGLLDE-ARQMFY 317

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            + R        +Y  L++G  +   +E+   +  ++ Q+G V N +T   +++  C+ G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A  +F+ +      P++ T++ L++  C   K+EKA  ++  M + ++  +++ Y+
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I+I G+ K G++++  +L  +   +G+K +V+ +++++  +   G +  A   + +M   
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497

Query: 348 GFLPNVISY 356
           GFLPN   Y
Sbjct: 498 GFLPNESVY 506


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 244/531 (45%), Gaps = 44/531 (8%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L++ Y + G++ ++ E+   M D G+  S      L+  L+ ++++   +K+   M G G
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112

Query: 178 --------------FC-------------------------VYEFLMNGLLRKGVIENAF 198
                         +C                          Y  L+ GL R G +E AF
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
              + +   G VP+  T   ++  LC + +   A +L D +     KPNVV ++ LI+ F
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
            +E   ++AF++   M+   + P+ I Y  L+ GL K G++   + LL   +    + D 
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           + ++ +++ +    +   A +    M N G  PNV +YSI+I GLCQ G   +A  L  +
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----- 433
           +  + L+P+   Y+ LI G+C+ G +     ++D M K  + PD    + LI GL     
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + ++ ++F Q     L+PN F ++ L+ G  +        +L   M    +KP+ + +  
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L+        +      F  ML +G+  D   Y  +IH L    N+     +   +E+NG
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNG 532

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             PD+ +Y+ L++ L K  + + A  +  +++ +G++P+I+ YN +I G C
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 583



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 257/537 (47%), Gaps = 51/537 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPD--LVQRLMSCLVDSNSVGQYYKLCR 171
           Y+ LI    R G ++E+   F +  DM  Y L PD      L++ L  S    +   L  
Sbjct: 155 YNVLIAGLCRSGAVEEA---FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 211

Query: 172 AMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M          VY  L++G +R+G  + AF M ++++  G  PN +T + +++ LC  G
Sbjct: 212 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 271

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           Q+  AS L   ++    +P+ +T++ +I    +    + AF+L + M    + P++  YS
Sbjct: 272 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYS 331

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I+I GL ++G  ++ ++LL     +GLK +  V++ ++  Y   G+V  A + +D+M   
Sbjct: 332 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV 391

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
             LP++  Y+ LI GL + GR+ E+   F Q+  R L P+  TYS LI G+ K+G L   
Sbjct: 392 NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA 451

Query: 408 FSLYDNMIKRGLKPDAVVC---------------------SLLINGLMGD---------- 436
             L   M+  GLKP+ V+                      S+L  G+M D          
Sbjct: 452 EQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHN 511

Query: 437 ---------ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                    A R   +  +   +P++ ++++L+ G C+         +   M    + P+
Sbjct: 512 LSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 571

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           ++ +  LI G+   G +S A  +F  +L +GL P+ +TY+++I G  K  +IS   +++ 
Sbjct: 572 IVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYN 631

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            M   G+ PD  +Y+VL        +L+ A+ L  ++  RG    I ++N ++ G+C
Sbjct: 632 EMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFC 687



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 232/512 (45%), Gaps = 78/512 (15%)

Query: 171 RAMRGKGF---CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           RA+   G     V + L++   + G +++A  +   +  RG  P+I  CN +LK L    
Sbjct: 37  RALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRAD 96

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK--------------------------- 260
            +     + + ++  G  P+V T+STLI A+CK                           
Sbjct: 97  AMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYN 156

Query: 261 --------EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
                      +E+AF     M +  LVPD   Y  LI+GL K+ R  E   LL      
Sbjct: 157 VLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCA 216

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            LK +VVV+++++D ++  G+   A +    M+  G  PN I+Y  L++GLC+ G++  A
Sbjct: 217 ELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRA 276

Query: 373 CGLFGQV------------------------------LIRRLE-----PSLLTYSSLIDG 397
             L  Q+                              L+  +E     P++ TYS +I G
Sbjct: 277 SLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHG 336

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPN 452
            C+SG+      L + M  +GLKP+A V + LI+G   +     A   F +  ++ ++P+
Sbjct: 337 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 396

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           L+ +N+L+ G  ++ R  ++ K F  M    + P+  T++ LI G    G L SA  L  
Sbjct: 397 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 456

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +ML  GL P+ + Y  ++   FK  +I      FK M   GV  D  IY +L++ L    
Sbjct: 457 RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG 516

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N++AA ++  ++   G  PD+  Y+++I G C
Sbjct: 517 NMEAAFRVLSEIEKNGSVPDVHVYSSLISGLC 548



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 158/588 (26%), Positives = 259/588 (44%), Gaps = 74/588 (12%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N I+    + +N   A +      N   SPN+   + +IH L QS   + AS + ++M  
Sbjct: 296 NLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 355

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +  K   F              Y+ LI  Y R G +  + EIF  M+ + +   PDL   
Sbjct: 356 KGLKPNAFV-------------YAPLISGYCREGNVSLACEIFDKMTKVNVL--PDL--- 397

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                                    +C Y  L+ GL + G +E +     Q+ +RG +PN
Sbjct: 398 -------------------------YC-YNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 431

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
             T + ++     NG + +A  L   +L  G KPN V +  L+ ++ K   +EK    + 
Sbjct: 432 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 491

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M++  ++ D  IY ILI  L  +G ++    +L      G   DV V+SS++       
Sbjct: 492 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTA 551

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           D  +A    D M   G  PN++ Y+ LI GLC+ G +  A  +F  +L + L P+ +TY+
Sbjct: 552 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 611

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLI 450
           SLIDG CK G + + F LY+ M+  G+ PDA V S+L  G    GD  +  F    M L 
Sbjct: 612 SLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 671

Query: 451 PNLFI--FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
            +  I  FN L+DG C+  +  +T+KL  ++    + P+ +T   +I G++  G LS   
Sbjct: 672 GHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 731

Query: 509 L-------------------LFFQMLKRGLTP-DVITYSAIIHGLFKGKNISVGLHMFKL 548
                               LF  M+ +G  P DV+    +I    K  N+   L +  +
Sbjct: 732 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDV 789

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG-LEPDIIT 595
           +         + Y  +++ L ++  L  AL L  ++  RG L+P ++ 
Sbjct: 790 IVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 837


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 248/502 (49%), Gaps = 13/502 (2%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G  +  L   Y R   I +++ + A M D+    S      L+  +  ++ +   Y   +
Sbjct: 170 GLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIK 229

Query: 172 AMRG-KGFCVYEFLMNGLLRKGVIENA---FHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                +  C    L++GL  +  +E+A    H   +V+     P+IV+ N I+ + C  G
Sbjct: 230 VSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVG----PSIVSINTIMSKFCKVG 285

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            I  A S F +++  G   +  +++ L++  C    +++A    + M +  + PD++ Y+
Sbjct: 286 LIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYN 345

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L  G    G +    +++   L +GL  D+V +++++  +  +G++  A++     L+ 
Sbjct: 346 TLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSR 405

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GF  NVI Y++L+  LC+ GR+ EA  LF ++   RLEP  + YS LI G CK G ++  
Sbjct: 406 GFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRA 465

Query: 408 FSLYDNM-IKRGLKPD----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           + LY+ M +KR         AV+  L  NG + +A  +F    RM L+ ++ ++N ++DG
Sbjct: 466 YQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDG 525

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             RL    + ++L+  M    I P V+T   LI G   +G L  A  +   +  +GL P 
Sbjct: 526 YVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPS 585

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V+TY+ +++   +  N+    H    ME N V P    Y VL+  L ++  +  +L+L  
Sbjct: 586 VVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLE 645

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
            +  +GL PD +TYNTII  +C
Sbjct: 646 YMYAKGLLPDSVTYNTIIQCFC 667



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 245/528 (46%), Gaps = 64/528 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+      G +DE++     M   G+   PD+V          N++ + + L   M 
Sbjct: 309 YNILLHGLCVAGSMDEALGFTDDMEKHGV--EPDVVTY--------NTLAKGFLLLGLMS 358

Query: 175 GKGFCVYEFLMNGL--------------LRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           G    V + L+ GL               + G IE A  + ++ + RGF  N++  N +L
Sbjct: 359 GARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLL 418

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC  G+I  A +LFD +  +  +P+ + +S LI+  CKE  +++A+QLY  M      
Sbjct: 419 SCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKF 478

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P       ++ GLFK G + E      T     L  DVV+++ ++D YV +  +  A+Q 
Sbjct: 479 PHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQL 538

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           Y +M+  G  P+V++++ LI G C++G L+EA  +   + ++ L PS++TY++L++ +C+
Sbjct: 539 YYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCE 598

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
            G +++ F     M    + P  V  ++LI GL     M ++L+         L+P+   
Sbjct: 599 VGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVT 658

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI----------------- 498
           +NT++   C+ K  T  ++L+ +M ++N  P  +T+ VLI  +                 
Sbjct: 659 YNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIE 718

Query: 499 ------------------ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                              ++G +S A+  F QML +G    +  YSA+I+ L K   I+
Sbjct: 719 DRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLIT 778

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
              + F +M   GV PD  I   +LN   ++ N  +  +    +   G
Sbjct: 779 EAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 218/462 (47%), Gaps = 40/462 (8%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +M+   + G+I+ A      +++ G + +  + N +L  LC+ G +  A    D +   G
Sbjct: 277 IMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHG 336

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +P+VVT++TL   F     +  A ++   M+   L PDL+ Y+ LI G  + G ++E  
Sbjct: 337 VEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEAL 396

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L    L RG KL+V+ ++ ++     +G +  A+  +D M      P+ I YSILI GL
Sbjct: 397 KLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGL 456

Query: 364 CQQGRLVEACGLFGQVLIRRLEP-----------------------------------SL 388
           C++G +  A  L+ Q+ ++R  P                                    +
Sbjct: 457 CKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDV 516

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDAL--RFFFQS 444
           + Y+ +IDG+ +   + +   LY  MI+RG+ P  V  + LING    GD +  R   + 
Sbjct: 517 VLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEV 576

Query: 445 VRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
           +R+  L+P++  + TLM+  C +    +       M    + P  +T+TVLI+G+  Q  
Sbjct: 577 IRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNK 636

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  ++ L   M  +GL PD +TY+ II    KGK I+  L ++ +M  +   P    Y V
Sbjct: 637 MHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKV 696

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L+N L    +L    ++   + DR +     TY TII  +C+
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCA 738



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 199/432 (46%), Gaps = 9/432 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ L     R  +I +A  +  ++    F  ++ T N +L  +     + +   +++ +
Sbjct: 172 VWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWD---VYNEI 228

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            + G   +  T S LI+  C+++KLE A    +   ++ + P ++  + ++    K G +
Sbjct: 229 KVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLI 287

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                     +  GL  D   ++ ++      G +  A+   D M   G  P+V++Y+ L
Sbjct: 288 DVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTL 347

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
            KG    G +  A  +  ++L++ L P L+TY++LI G C+ G + +   L    + RG 
Sbjct: 348 AKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGF 407

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           K + +  ++L++     G + +AL  F +   + L P+  +++ L+ G C+        +
Sbjct: 408 KLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQ 467

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L+  M +    P       ++ G+   G++S A   F    +  L  DV+ Y+ +I G  
Sbjct: 468 LYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYV 527

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +   I+  + ++  M   G+ P +  +N L+N   +  +L  A K+   +  +GL P ++
Sbjct: 528 RLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587

Query: 595 TYNTIICGYCSL 606
           TY T++  YC +
Sbjct: 588 TYTTLMNAYCEV 599



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/312 (20%), Positives = 120/312 (38%), Gaps = 74/312 (23%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+ YVR+  I E+++++  M + GI  S      L++       + +  K+   +R
Sbjct: 519 YNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIR 578

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFH-----------------------------MH 201
            KG       Y  LMN     G ++  FH                             MH
Sbjct: 579 LKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMH 638

Query: 202 R--QVIQ----RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS--- 252
              Q+++    +G +P+ VT N I++  C   +I  A  L++++LL    P  VT+    
Sbjct: 639 ESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLI 698

Query: 253 --------------------------------TLINAFCKEAKLEKAFQLYNLMMEMDLV 280
                                           T+I A C + ++ KA   +N M+    V
Sbjct: 699 NALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFV 758

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
             +  YS +I+ L K G + E     +  L  G+  D  +  +V++A+   G+     + 
Sbjct: 759 ISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEF 818

Query: 341 YDRMLNGGFLPN 352
              ++  GF+ +
Sbjct: 819 LAMVVKSGFISH 830


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/606 (24%), Positives = 270/606 (44%), Gaps = 93/606 (15%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
           DVA  V +KMV             ++ L      Y+ L+  YV  G  +    +   MS+
Sbjct: 243 DVAMEVLEKMV-------------KEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSE 289

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIE 195
            G+  +      LM        + +  KL R +      V     Y  L++G  + G +E
Sbjct: 290 RGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRME 349

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           +A  +  ++++ G   N+V CN ++K  C  GQ+  A  +F  ++    KP+  +++TL+
Sbjct: 350 DAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLL 409

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           + +C+E K+ KAF L   M+   + P ++ Y+ +I GL   G   +   L    ++RG+ 
Sbjct: 410 DGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVT 469

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            + +   +++D +  +GD  RA+  +  +L  GF  + ++++ +I GLC+ G+L+EA  +
Sbjct: 470 PNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAV 529

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF-------------------SLYDNMIK 416
           F ++    L P  +TY +L DG+CK+G +++ F                   SL D + K
Sbjct: 530 FDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFK 589

Query: 417 ----------------RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
                           RGL P+ V    LI+G      +  A   +F+ +     PN+ +
Sbjct: 590 IRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVV 649

Query: 456 FNTLMDGCCRLKRATDTVKL------FMLMGMYN------IKPDV--------------- 488
            + ++    R  R ++   +      F ++ ++N      +K D+               
Sbjct: 650 CSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSD 709

Query: 489 --------ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                   I + + I G+   G L  A  +   ++ RG  PD  TY  +IH      N+ 
Sbjct: 710 ICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVD 769

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               +   M   G+ P+I IYN L+N L K  N+D A +LF +L  +GL P+ +TYN +I
Sbjct: 770 EAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILI 829

Query: 601 CGYCSL 606
             YC +
Sbjct: 830 GCYCRI 835



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 224/443 (50%), Gaps = 6/443 (1%)

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           ++ R  R  G     FL+  L++KG    A  +  Q++  G VP++  C+ ++   C  G
Sbjct: 181 EMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVG 240

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  + + ++  G +PNVVT++ L+N +      E   ++  LM E  +  +++  +
Sbjct: 241 RVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCT 300

Query: 288 ILIDGLFKAGRLKEGNELLL-TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +L+ G  K G++ E  +LL     D  L +D  V+  ++D Y  +G +  AV+  D ML 
Sbjct: 301 MLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLR 360

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G   N++  + LIKG C+ G++ EA  +F  ++   L+P   +Y++L+DG+C+ GK+  
Sbjct: 361 VGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSK 420

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMD 461
            F L + M+  G+ P  V  + +I GL+      DAL  +   V   + PN     T++D
Sbjct: 421 AFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLD 480

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
              ++  +   + L+  +         +    +I G+   G L  A  +F +M + GL+P
Sbjct: 481 CFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP 540

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D ITY  +  G  K  N+     +  +MER  ++  I +YN L++ L K   L+    L 
Sbjct: 541 DEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLL 600

Query: 582 GQLTDRGLEPDIITYNTIICGYC 604
            ++  RGL P+++TY T+I G+C
Sbjct: 601 VEMQTRGLSPNVVTYGTLISGWC 623



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 10/312 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L + Y + G + E+ +I   M    +  S ++   L+  L     +     L   M+
Sbjct: 545 YRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQ 604

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L++G   +  ++ AFH++ ++I+RGF PN+V C+KI+  L  + +I 
Sbjct: 605 TRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRIS 664

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL---IIYS 287
            A+ + D +L       +   +   +   K     +A ++ + + + D+   L   I+Y+
Sbjct: 665 EATVILDKMLDFDI---LAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYN 721

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I IDGL K+G+L E   +L   + RG   D   + +++ A    G+V  A +  D ML  
Sbjct: 722 IAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEK 781

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +PN+  Y+ LI GLC+ G +  A  LF ++  + L P+ +TY+ LI  +C+ G L   
Sbjct: 782 GLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKA 841

Query: 408 FSLYDNMIKRGL 419
             L + M + G+
Sbjct: 842 SRLREKMTEEGI 853



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/287 (20%), Positives = 130/287 (45%), Gaps = 26/287 (9%)

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS------------ 393
           N  + P+ +SYSIL+  L       EA  +  Q++      +   Y+             
Sbjct: 94  NSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFG 153

Query: 394 --------LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRF 440
                   L+  F + G  +    ++D M + G  P    CS L+  L+       A+  
Sbjct: 154 FCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMV 213

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F Q V   ++P++++ + +++  C++ R    +++   M    ++P+V+T+  L+ G   
Sbjct: 214 FDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVG 273

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG-VAPDIA 559
           +G       +   M +RG++ +V+T + ++ G  K   +     + + +E +  +  D  
Sbjct: 274 RGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDER 333

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +Y VL++   +   ++ A+++  ++   GL+ +++  NT+I GYC L
Sbjct: 334 VYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKL 380



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 78/145 (53%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           + N +  N  +  LC +G++  A S+  VL+  G  P+  T+ TLI+A      +++AF+
Sbjct: 714 LSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFK 773

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L + M+E  L+P++ IY+ LI+GL K G +     L      +GL  + V ++ ++  Y 
Sbjct: 774 LRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYC 833

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVI 354
            IGD+ +A +  ++M   G    +I
Sbjct: 834 RIGDLDKASRLREKMTEEGISTRII 858


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 258/543 (47%), Gaps = 34/543 (6%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           Q G+  +  R+ RD + D G       Y+ +I  Y ++G++ E  ++       G+ L  
Sbjct: 282 QRGRMEDANRV-RDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDE 340

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQ 203
                L+        + + ++ C  M   GF      Y  L+NG   +G I++A  +   
Sbjct: 341 YSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFL 400

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +++RG VPN ++C+ +L      G+   A +L+   L  G   NVVT +T+IN  CK  +
Sbjct: 401 MLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRR 460

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           + +A +L++ M E     D + Y  LIDG  K G L    ++ +   + G    V +F+S
Sbjct: 461 MTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNS 520

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
            +         G+       M   G  PN ++Y  LI G C++G L +AC L+ +++ + 
Sbjct: 521 FITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKG 580

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL-------LINGLMGD 436
           L+P+L   S L+  F + GK+ +   +   +    +  D    +L       +I  L G 
Sbjct: 581 LKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGG 640

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
                 QS ++       ++N ++ G C+L R  D   LF  + +    PD  T++ LI 
Sbjct: 641 N----HQSAKI-------MWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIH 689

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G ++ GS+  A  L  +ML   LTP+++TY+++I+GL K  N+S  + +F  ++  G++P
Sbjct: 690 GCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISP 749

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
           +   YN L++   K+ N   A KL  ++   G++P + TY  +I G C+       GY +
Sbjct: 750 NAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCT------QGYME 803

Query: 617 SQI 619
             I
Sbjct: 804 EAI 806



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 260/590 (44%), Gaps = 73/590 (12%)

Query: 47  NPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRD 106
           +P  A+  F+      S    AQL+H+L  +     A  +   ++         F    +
Sbjct: 26  DPDAALHLFRLAPCRPSLLAHAQLLHILAHARRFPAARALLASLLSAHSVAPTLFPDLVE 85

Query: 107 SLGDF---GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
              DF      +  L+  +   G++ +++ +F  M   G   +     RL++ LV +  +
Sbjct: 86  VYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDI 145

Query: 164 GQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
           G    + + MR  G    +F    +     R G + +A    +++ + G   N+V  + +
Sbjct: 146 GTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAV 205

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD- 278
           +   C  GQ   A  L   L + G  PNVVT++ L+  +CKE ++E+A ++   + E + 
Sbjct: 206 MDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEK 265

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG--- 335
           +V D + Y  LI+G  + GR+++ N +    +D G+++++ V++++++ Y  +G +G   
Sbjct: 266 IVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVE 325

Query: 336 --------------------------------RAVQTYDRMLNGGFLPNVISYSILIKGL 363
                                           +A +T D M+  GF    ++Y+ L+ G 
Sbjct: 326 KLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGF 385

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C +G + +A  L+  +L R + P+ ++ S+L+DGF K+GK     +L+   + RGL  + 
Sbjct: 386 CSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNV 445

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           V  + +INGL                              C+ +R T+  +LF  M  ++
Sbjct: 446 VTINTVINGL------------------------------CKNRRMTEAEELFHRMKEWS 475

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
              D +T+  LI G    G L  A  +  +M   G  P V  +++ I GLF  K      
Sbjct: 476 CPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVN 535

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            +   M   G++P+   Y  L+    KE NL  A  L+ ++ ++GL+P++
Sbjct: 536 DIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNL 585



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 211/432 (48%), Gaps = 41/432 (9%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           ++ L+      G +++A ++  ++ + G    + +CN++L +L   G IG A ++F  + 
Sbjct: 97  FDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMR 156

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+  T + +  A+C++ ++  A                            A  LK
Sbjct: 157 CAGTLPDDFTVAIMAKAYCRDGRVAHA----------------------------ADFLK 188

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  E+       GL +++V + +VMD Y  IG    A +    +   G  PNV++Y++L+
Sbjct: 189 EMEEM-------GLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLV 241

Query: 361 KGLCQQGRLVEACGLFGQVLI-RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           KG C++GR+ EA  +  ++    ++    + Y +LI+G+C+ G++ D   + D MI  G+
Sbjct: 242 KGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGV 301

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + +  V + +ING      MG+  +    +    +  + + +NTL+DG CR    T   +
Sbjct: 302 QVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFE 361

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
              +M         +T+  L+ G  S+G++  A+ L+F MLKRG+ P+ I+ S ++ G F
Sbjct: 362 TCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFF 421

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K       L+++K     G+A ++   N ++N L K   +  A +LF ++ +     D +
Sbjct: 422 KAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSL 481

Query: 595 TYNTIICGYCSL 606
           TY T+I GYC L
Sbjct: 482 TYRTLIDGYCKL 493



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 235/514 (45%), Gaps = 39/514 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ Y R G + ++ E    M   G   +      L++      ++    KL   M 
Sbjct: 343 YNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLML 402

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G    E     L++G  + G  E A ++ ++ + RG   N+VT N ++  LC N ++ 
Sbjct: 403 KRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMT 462

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF  +       + +T+ TLI+ +CK   L +A Q+   M  +  VP + +++  I
Sbjct: 463 EAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFI 522

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GLF A +  + N++ +    +GL  + V + +++  +   G++  A   Y  M+  G  
Sbjct: 523 TGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLK 582

Query: 351 PNVISYSILIKGLCQQGRLVEA---------------CGL----FGQV--LIRRL----- 384
           PN+   S+L+    ++G++ EA               C       G+V  +I  L     
Sbjct: 583 PNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNH 642

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA------- 437
           + + + ++ +I G CK G++ D  +L++++  +G  PD    S LI+G            
Sbjct: 643 QSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFG 702

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           LR    S R+T  PN+  +N+L+ G C+    +  V LF  +    I P+ IT+  LI G
Sbjct: 703 LRDEMLSARLT--PNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDG 760

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
               G+ + A  L  +M+K G+ P V TY+ +IHGL     +   + +   M  N V P+
Sbjct: 761 HCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPN 820

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
              Y  L+    +  N+ A  KL+ ++   GL P
Sbjct: 821 FITYWTLIQGYARCGNMKAITKLYNEMHICGLLP 854



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 157/353 (44%), Gaps = 33/353 (9%)

Query: 113 CD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           CD   Y  LI+ Y ++G +  + +I   M ++G   S ++    ++ L  +   G+   +
Sbjct: 478 CDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDI 537

Query: 170 CRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC--------- 216
              M  KG       Y  L+ G  ++G + +A  ++ +++++G  PN+  C         
Sbjct: 538 RVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYR 597

Query: 217 -------NKILKRLCING----------QIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
                  N +L++L               IG  + + + L     +   + ++ +I   C
Sbjct: 598 EGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLC 657

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K  ++  A  L+  +     +PD   YS LI G   +G +     L    L   L  ++V
Sbjct: 658 KLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIV 717

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            ++S++       +V RAV  ++++ + G  PN I+Y+ LI G C+ G   EA  L  ++
Sbjct: 718 TYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKM 777

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
           +   ++P++ TY+ LI G C  G + +   L D MI+  + P+ +    LI G
Sbjct: 778 IKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQG 830



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 11/173 (6%)

Query: 443 QSVRMTLIPNLF-----------IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
            SV  TL P+L             F+ L+       +  D + +F  MG    +  + + 
Sbjct: 73  HSVAPTLFPDLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSC 132

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             L+  +   G + +A+ +F QM   G  PD  T + +     +   ++      K ME 
Sbjct: 133 NRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEE 192

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            G+  ++  Y+ +++   +    + A KL   L  +GL P+++TY  ++ GYC
Sbjct: 193 MGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYC 245


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 250/529 (47%), Gaps = 36/529 (6%)

Query: 95  GKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G       + RD  G  GC      Y+ L+  + R G++D +  +   M + G  L P+L
Sbjct: 204 GHRKEALSILRDMRG-AGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGG--LKPNL 260

Query: 150 V--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQ 203
           V    +++ +  +  +    K+   M  +G       Y  L+ G  + G    A  +  +
Sbjct: 261 VTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAE 320

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           + Q+G +P++VT   ++  +C  G +  A +L   +   G + N VTF+ LI+ FCK+  
Sbjct: 321 MTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 380

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L+ A      M +  + P ++ Y+ LI+G    GR+ E  ELL     +GLK DVV +S+
Sbjct: 381 LDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 440

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++ AY    D   A +   +ML  G LP+ I+YS LI+ LC + RL +A  LF  ++   
Sbjct: 441 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLG 500

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DAL 438
           L+P   TY+SLIDG CK G +    SL+D M+K G+ PD V  S+LINGL       +A 
Sbjct: 501 LQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 560

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVI------ 489
           +  F+      IP    ++ LM  CCR   LK     +K F + G+ N    V       
Sbjct: 561 QLLFKLYHEDPIPANTKYDALMH-CCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDR 619

Query: 490 -------THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
                   ++VLI G    G++  A+    QML+ G  P+  +  ++I GLF+   +   
Sbjct: 620 NWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEA 679

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             + + +       D      L+++ + E N+DA L +   +   GL P
Sbjct: 680 DQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 213/400 (53%), Gaps = 6/400 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G+VP+++  N +L  L  +  + +A   FD +L  G  PNV T++ L+ A C     ++A
Sbjct: 151 GYVPSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             +   M      P+++ Y+ L+   F+AG +     L+    + GLK ++V F+S+++ 
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G +  A + +D M+  G  P+ +SY+ L+ G C+ G   EA  +F ++  + + P 
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
           ++T++SLI   CK+G L    +L   M +RGL+ + V  + LI+     G + DAL    
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
              +  + P++  +N L++G C + R  +  +L   M    +KPDV+T++ +I       
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
              SA  L  QML++G+ PD ITYS++I  L   K +S    +FK M + G+ PD   Y 
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            L++   KE N+++AL L  ++   G+ PD++TY+ +I G
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLING 549



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 212/415 (51%), Gaps = 7/415 (1%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            ++  G  PN+ T N +++ LC  G    A S+   +   G  PNVVT++TL+ AF +  
Sbjct: 180 SMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAG 239

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +++ A +L  +M E  L P+L+ ++ +++G+ KAG++++  ++    +  GL  D V ++
Sbjct: 240 EVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYN 299

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++  Y   G    A+  +  M   G +P+V++++ LI  +C+ G L  A  L  Q+  R
Sbjct: 300 TLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRER 359

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            L+ + +T+++LIDGFCK G L D       M +  +KP  V  + LING      M +A
Sbjct: 360 GLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEA 419

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                +     L P++  ++T++   C+        +L   M    + PD IT++ LIR 
Sbjct: 420 RELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRV 479

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +  +  LS A +LF  M+K GL PD  TY+++I G  K  N+   L +   M + GV PD
Sbjct: 480 LCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPD 539

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII--CGYCSLNSCL 610
           +  Y+VL+N L K      A +L  +L      P    Y+ ++  C    L S L
Sbjct: 540 VVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVL 594



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 231/461 (50%), Gaps = 22/461 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+  L  +G  + A  + R +   G  PN+VT N ++      G++  A  L  ++
Sbjct: 192 TYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM 251

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KPN+VTF++++N  CK  K+E A ++++ M+   L PD + Y+ L+ G  KAG  
Sbjct: 252 REGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCS 311

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   +      +G+  DVV F+S++      G++ RAV    +M   G   N ++++ L
Sbjct: 312 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTAL 371

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C++G L +A      +   R++PS++ Y++LI+G+C  G++ +   L   M  +GL
Sbjct: 372 IDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 431

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KPD V  S +I+    +     A     Q +   ++P+   +++L+   C  KR +D   
Sbjct: 432 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHV 491

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    ++PD  T+T LI G   +G++ SA+ L  +M+K G+ PDV+TYS +I+GL 
Sbjct: 492 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLS 551

Query: 535 K-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE------------CN---LDAAL 578
           K  + +     +FKL   + + P    Y+ L++   K             C    ++ A 
Sbjct: 552 KSARAMEAQQLLFKLYHEDPI-PANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 610

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           K++  + DR    D   Y+ +I G+C   + +    F  Q+
Sbjct: 611 KVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQM 651



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 226/457 (49%), Gaps = 26/457 (5%)

Query: 171 RAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           R MRG G       Y  L+    R G ++ A  +   + + G  PN+VT N ++  +C  
Sbjct: 214 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKA 273

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++ +A  +FD ++  G  P+ V+++TL+  +CK     +A  ++  M +  ++PD++ +
Sbjct: 274 GKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF 333

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LI  + KAG L+    L+    +RGL+++ V F++++D +   G +  A+     M  
Sbjct: 334 TSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQ 393

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               P+V+ Y+ LI G C  GR+ EA  L  ++  + L+P ++TYS++I  +CK+     
Sbjct: 394 CRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHS 453

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMD 461
            F L   M+++G+ PDA+  S LI  L G     DA   F   +++ L P+ F + +L+D
Sbjct: 454 AFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 513

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+       + L   M    + PDV+T++VLI G++       A  L F++      P
Sbjct: 514 GHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIP 573

Query: 522 DVITYSAIIHGLFKGKNISV-----GLHMFKLM-----------ERNGVAPDIAIYNVLL 565
               Y A++H   K +  SV     G  M  LM           +RN    D ++Y+VL+
Sbjct: 574 ANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNL-DGSVYSVLI 632

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +   +  N+  AL    Q+   G  P+  +  ++I G
Sbjct: 633 HGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRG 669



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 87/176 (49%)

Query: 429 LINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
           L +  +  A RFF   +   + PN++ +N L+   C      + + +   M      P+V
Sbjct: 166 LSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNV 225

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+  L+      G +  A  L   M + GL P+++T++++++G+ K   +     +F  
Sbjct: 226 VTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDE 285

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M R G+APD   YN L+    K      AL +F ++T +G+ PD++T+ ++I   C
Sbjct: 286 MVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMC 341



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/329 (19%), Positives = 119/329 (36%), Gaps = 93/329 (28%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  Y  +G++DE+ E+   M   G  L PD+V    ++S    +      ++L + 
Sbjct: 403 YNALINGYCMVGRMDEARELLHEMEAKG--LKPDVVTYSTIISAYCKNCDTHSAFELNQQ 460

Query: 173 MRGKG--------------FC-------------------------VYEFLMNGLLRKGV 193
           M  KG               C                          Y  L++G  ++G 
Sbjct: 461 MLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 520

Query: 194 IENAFHMHRQVIQRGFVPNIVT-------------------------------------- 215
           +E+A  +H ++++ G +P++VT                                      
Sbjct: 521 VESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDA 580

Query: 216 ----CNK--------ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
               C K        +LK  C+ G +  A  ++  +L      +   +S LI+  C+   
Sbjct: 581 LMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGN 640

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           + KA   +  M++    P+      LI GLF+ G + E ++++   L+     D     +
Sbjct: 641 VMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKA 700

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           ++D  +  G+V   +     M   G LP+
Sbjct: 701 LIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 267/548 (48%), Gaps = 39/548 (7%)

Query: 69  QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKI 128
           +L+  L +    D AS VF +M+ +  +   F              ++ L+    R  ++
Sbjct: 12  KLLLQLTREHRHDKASAVFQEMIDKSCQPDAF-------------TFAILLRGLCRSNQL 58

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEF 183
           +++ ++   M +MG      +   L+S    +   GQ +K    M  K  C+     Y  
Sbjct: 59  EKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMV-KNHCLPTVVTYTN 117

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++GL +     +A  +  ++  +G  PNI T N I++ LC   ++  A  + + + + G
Sbjct: 118 IVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVT+++ I   CK  ++++A +    +  M + PD++ Y+ +I+GL K+G L   +
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSAS 234

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +L    +RG   DVV +SS++D +   G+V RA+   D ML  G  PN+++Y+ L+  L
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
            + G + +A  +  ++  R   P +++Y++ IDG CK+ +++   +++D M++RG  P+A
Sbjct: 295 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354

Query: 424 VVCSLLI---------------NGLMGDALRFFFQSVRMTLI-PNLFIFNTLMDGCCRLK 467
              S+LI                G   +A   F + +   +  P++F +N ++D  C+ +
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 414

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +    +++   M   N   +V+T  +L+ G+     LS A  +   M+  G  PD +TY 
Sbjct: 415 QIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYG 473

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++  + K    +  L +F+   + G  PD+  Y+ L+  L+ E   + A  LF +L +R
Sbjct: 474 TLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVER 533

Query: 588 GLEPDIIT 595
              PD  T
Sbjct: 534 RWVPDDKT 541



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 202/414 (48%), Gaps = 19/414 (4%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G+  N+ T NK+L +L    +   AS++F  ++    +P+  TF+ L+   C+  +LEKA
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +L   M EM  VPD  IY+ LI G  KA    +  + L   +       VV +++++D 
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                    AV+  D M + G  PN+ +Y+++++GLC++ +L EA  +  ++ +R   P 
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++TY+S I G CK  ++ +       M    + PD V  + +INGL     +  A R   
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                   P++  +++L+DG C+       + L   M     +P+++ +  L+  +   G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP------ 556
            +  A  +  +M +RG TPDV++Y+A I GL K + +     +F  M   G  P      
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 557 ----DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL-EPDIITYNTIICGYCS 605
               DI +Y VLL+ L K    D A  LF ++ D  + EPD+  YN ++  +C 
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCK 412



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 219/441 (49%), Gaps = 20/441 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+  L R+   + A  + +++I +   P+  T   +L+ LC + Q+  A  L   +
Sbjct: 9   TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             +G  P+   ++ LI+ + K     +AF+    M++   +P ++ Y+ ++DGL KA R 
Sbjct: 69  KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++  +LL    D+G   ++  ++ +++       +  A +  + M   G+ P+V++Y+  
Sbjct: 129 RDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSF 188

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKGLC+  R+ EA     ++ +    P +++Y+++I+G CKSG L     + D+M  RG 
Sbjct: 189 IKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGC 245

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V  S LI+G      +  A+      +++   PN+  +N+L+    RL        
Sbjct: 246 TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAED 305

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP----------DVI 524
           + + M      PDV+++   I G+     +  A  +F +M++RG TP          D++
Sbjct: 306 MLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDIL 365

Query: 525 TYSAIIHGLFKGKNISVGLHMF-KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            Y+ ++ GL KG        +F K+++     PD+  YNV+L+   K   +D AL++  Q
Sbjct: 366 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQ 425

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           + ++    +++T+N ++ G C
Sbjct: 426 MLEKNC-CNVVTWNILVHGLC 445



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 206/443 (46%), Gaps = 22/443 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+ GL R   +E A  +  ++ + G VP+    N ++         G A      +
Sbjct: 44  TFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 103

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +     P VVT++ +++  CK  +   A +L + M +    P++  Y+++++GL +  +L
Sbjct: 104 VKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 163

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  ++L     RG   DVV ++S +        V  A +   RM      P+V+SY+ +
Sbjct: 164 DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTV 220

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+ G L  A  +   +  R   P ++TYSSLIDGFCK G++     L D+M+K G 
Sbjct: 221 INGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 280

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +P+ V  + L+  L     +G A     +  R    P++  +N  +DG C+ +R      
Sbjct: 281 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 340

Query: 475 LFMLMGMYNIKP----------DVITHTVLIRGIASQGSLSSAILLFFQMLKRGL-TPDV 523
           +F  M      P          D++ +TVL+ G+   G    A  LF ++L   +  PDV
Sbjct: 341 VFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDV 400

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLM-ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
             Y+ ++    K + I   L + K M E+N    ++  +N+L++ L  +  L  A  +  
Sbjct: 401 FFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC--NVVTWNILVHGLCVDDRLSDAETMLL 458

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
            + D G  PD +TY T++   C 
Sbjct: 459 TMVDEGFIPDFVTYGTLVDAMCK 481



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 185/363 (50%), Gaps = 6/363 (1%)

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G + NV T++ L+    +E + +KA  ++  M++    PD   ++IL+ GL ++ +L++
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             +LL    + G   D  ++++++  Y    D G+A +    M+    LP V++Y+ ++ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GLC+  R  +A  L  ++  +   P++ TY+ +++G C+  KL +   + + M  RG  P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 422 DAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
           D V  +  I GL      D  R F    RM + P++  + T+++G C+        ++  
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFL--ARMPVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M      PDV+T++ LI G    G +  A+ L   MLK G  P+++ Y++++  L +  
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           +I     M   MER G  PD+  YN  ++ L K   +  A  +F ++ +RG  P+  +Y+
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 598 TII 600
            +I
Sbjct: 359 MLI 361



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 208/464 (44%), Gaps = 64/464 (13%)

Query: 93  QFGKTYNFF-RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
            FG+ + F   + ++        Y+ +++   +  +  ++V++   M D G   SP++  
Sbjct: 92  DFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGC--SPNIYT 149

Query: 152 R--LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVI 205
              ++  L +   + +  K+   M  +G+      Y   + GL +   ++ A    R+ +
Sbjct: 150 YNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA----RKFL 205

Query: 206 QR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
            R    P++V+   ++  LC +G + +AS + D +   G  P+VVT+S+LI+ FCK  ++
Sbjct: 206 ARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEV 265

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E+A  L + M+++   P+++ Y+ L+  L + G + +  ++L+    RG   DVV +++ 
Sbjct: 266 ERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNAC 325

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI----------KGLCQQGRLVEACG 374
           +D       V +A   +DRM+  G  PN  SYS+LI           GLC+ GR  EAC 
Sbjct: 326 IDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACA 385

Query: 375 LFGQVLIRRL-EPSLLTYSSLIDGFCK--------------------------------- 400
           LF +VL  ++ EP +  Y+ ++D  CK                                 
Sbjct: 386 LFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLC 445

Query: 401 -SGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLF 454
              +L D  ++   M+  G  PD V    L++     G    AL  F ++V+   +P++ 
Sbjct: 446 VDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVV 505

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
            ++ L+ G      A +   LF  +      PD  T  +L R +
Sbjct: 506 TYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKL 549


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 152/575 (26%), Positives = 274/575 (47%), Gaps = 30/575 (5%)

Query: 44  KTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRL 103
           + + P  A+ FF             QL+   L+ D+  +A+H+  K   +  +T     +
Sbjct: 123 RAHRPELALAFF------------GQLLRTGLRVDII-IANHLL-KGFCEAKRTDEALDI 168

Query: 104 FRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSC 156
                 + GC      YS L+++    GK  ++ ++   M++ G   SPD+V    ++  
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 157 LVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                 V +   L + M  +G    F  Y  +++ L +   ++ A    RQ++ +G +PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
             T N ++      GQ   A  +F  +      P+VVTF+ L+ + CK  K+++A  +++
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M      PD+  Y+I+++G    G L +  +L    L  G+   +  F+ ++ AY   G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
            + +A+  ++ M + G  PNV++Y+ +I  LC+ G++ +A   F Q++ + + P    Y 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRM 447
            LI GFC  G L     L   ++  G+  D V+ S +IN     G + DA   F  +V +
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            L P   +++ LMDG C + +    +++F  M    I+P+ + +  L+ G    G +   
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           + LF +ML++G+ P  I Y+ II GLF+          F  M  +G+A +   Y+++L  
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 648

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L K    D A+ LF +L    ++ DIIT NT+I G
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 683



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/593 (25%), Positives = 281/593 (47%), Gaps = 54/593 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N ++    K  +   A   FK        P+    + ++H L ++   D A     +MV 
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVN 282

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +     N+              Y+ LI  Y   G+  E+V +F  M    I   PD+V  
Sbjct: 283 KGVLPNNW-------------TYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL--PDVVTF 327

Query: 151 QRLMSCLVDSNSVGQYYKL--CRAMRGKGFCV--YEFLMNGLLRKGVIENAFHMHRQVIQ 206
             LM  L     + +   +    AM+G+   V  Y  ++NG   KG + +   +   ++ 
Sbjct: 328 NMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 387

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P I T N ++K     G +  A  +F+ +   G KPNV+T++T+I A C+  K++ 
Sbjct: 388 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDD 447

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A + +N M++  + PD   Y  LI G    G L +  EL+   ++ G+ LD+V+FSS+++
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIIN 507

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               +G V  A   +D  +N G  P  + YS+L+ G C  G++ +A  +F  ++   +EP
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
           + + Y +L++G+CK G++ +G SL+  M+++G+KP  ++ +++I+GL        F++ R
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL--------FEAGR 619

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              +P    F+ + +                      I  +  T+++++RG+        
Sbjct: 620 T--VPAKVKFHEMTES--------------------GIAMNKCTYSIVLRGLFKNRCFDE 657

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           AI LF ++    +  D+IT + +I G+F+ + +     +F  + R+G+ P +  Y++++ 
Sbjct: 658 AIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMIT 717

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            LIKE  ++ A  +F  + + G EPD    N ++      N  +  G + S+I
Sbjct: 718 NLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 16/290 (5%)

Query: 337 AVQTYDRMLNGGFLPNVIS-----YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           AV  ++R  +    P V+S     Y+IL+    +  R   A   FGQ+L   L   ++  
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 149

Query: 392 SSLIDGFCKSGKLRDGFS-LYDNMIKRGLKPDAVVCSLLI--------NGLMGDALRFFF 442
           + L+ GFC++ +  +    L     + G  PD    S+L+        +G   D LR   
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +       P++  +NT++DG  +         LF  M    I PD +T++ ++  +    
Sbjct: 210 EG-GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++  A     QM+ +G+ P+  TY+ +I+G          + +FK M R  + PD+  +N
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFN 328

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
           +L+  L K   +  A  +F  +  +G  PD+ +YN ++ GY +   CL+D
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT-KGCLVD 377



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 14/301 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS--CLVDSNSVGQYYKLCR- 171
           +S +I N  ++G++ ++  IF    ++G++ +  +   LM   CLV     G+  K  R 
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLV-----GKMEKALRV 556

Query: 172 --AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
             AM   G      VY  L+NG  + G I+    + R+++Q+G  P+ +  N I+  L  
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            G+   A   F  +   G   N  T+S ++    K    ++A  L+  +  M++  D+I 
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIIT 676

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
            + +I G+F+  R++E  +L  +    GL   VV +S ++   +  G V  A   +  M 
Sbjct: 677 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           N G  P+    + +++ L ++  +V A     ++  R      LT   L+D F   G  R
Sbjct: 737 NAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCR 796

Query: 406 D 406
           +
Sbjct: 797 E 797


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 226/491 (46%), Gaps = 34/491 (6%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI+   R  ++  +V +   MS   +         LM   ++  S+    ++   M   G
Sbjct: 201 LIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETG 260

Query: 178 ----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                     L+NG  + G +E+A    ++ I  GF P+ VT N  +  LC NG + +A 
Sbjct: 261 CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHAL 320

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            + D++L  G  P+V T++T+IN   K  +L++A  + N M++   +PD   ++ LI  L
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
               RL+E  +L      +GL  DV  F+ +++A   +GD    ++ ++ M + G  P+ 
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDE 440

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ILI  LC  G+LV A  L  ++       S +TY+++ID  CK  ++ +   ++D 
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ 500

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           M   G+   AV  + LI+GL                              C+ KR  D  
Sbjct: 501 MDAHGISRSAVTFNTLIDGL------------------------------CKAKRIDDAT 530

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +L   M    ++P  IT+  ++     QG L  A  +   M   G   DV+TY  +I+GL
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K     V L + + M   G+ P    YN ++  L +  NL  AL LF ++T+ G  PD 
Sbjct: 591 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDA 650

Query: 594 ITYNTIICGYC 604
           +TY  +  G C
Sbjct: 651 LTYKIVFRGLC 661



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 206/431 (47%), Gaps = 5/431 (1%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            VY  L+N L     ++    ++ ++  RG  P++VT N ++K LC   Q+  A  + + 
Sbjct: 161 AVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEE 220

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +      P+  TF+TL+  F +E  +E A ++   MME    P  +  ++LI+G  K GR
Sbjct: 221 MSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGR 280

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +++    +   +  G + D V +++ +      G V  A++  D ML  G  P+V +Y+ 
Sbjct: 281 VEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNT 340

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +I  L + G L EA G+  Q++ R   P   T+++LI   C   +L +   L   +  +G
Sbjct: 341 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG 400

Query: 419 LKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           L PD    ++LIN L  +GD    +R F +       P+   +N L+D  C + +  + +
Sbjct: 401 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNAL 460

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M         +T+  +I  +  Q  +  A  +F QM   G++   +T++ +I GL
Sbjct: 461 DLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGL 520

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K K I     + + M + G+ P    YN +L    K+ +L  A  +   +T  G E D+
Sbjct: 521 CKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDV 580

Query: 594 ITYNTIICGYC 604
           +TY T+I G C
Sbjct: 581 VTYGTLINGLC 591



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 176/367 (47%), Gaps = 5/367 (1%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G + +   ++ L+N   + ++++    +YN M +  + PD++  + LI  L +A +++  
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTA 214

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             +L       +  D   F+++M  ++  G +  A++   +M+  G  P  ++ ++LI G
Sbjct: 215 VLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLING 274

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C+ GR+ +A G   + +    EP  +TY++ +   C++G +     + D M++ G  PD
Sbjct: 275 YCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334

Query: 423 -----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
                 V+  L  NG + +A     Q V    +P+   FNTL+   C   R  + + L  
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            + +  + PDV T  +LI  +   G     I LF +M   G  PD +TY+ +I  L    
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +   L + K ME NG       YN +++ L K+  ++ A ++F Q+   G+    +T+N
Sbjct: 455 KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFN 514

Query: 598 TIICGYC 604
           T+I G C
Sbjct: 515 TLIDGLC 521



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 185/402 (46%), Gaps = 23/402 (5%)

Query: 71  IHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDE 130
           +H L Q+     A  V D M +Q G   + F             Y+ +I    + G++DE
Sbjct: 307 VHCLCQNGHVSHALKVMDLM-LQEGHDPDVFT------------YNTVINCLSKNGELDE 353

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--VYEF--LMN 186
           +  I   M D G          L+  L   N + +   L R +  KG    VY F  L+N
Sbjct: 354 AKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILIN 413

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
            L + G       +  ++   G  P+ VT N ++  LC  G++ NA  L   +   G   
Sbjct: 414 ALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPR 473

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           + VT++T+I+A CK+ ++E+A ++++ M    +    + ++ LIDGL KA R+ +  EL+
Sbjct: 474 STVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELI 533

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              +  GL+   + ++S++  Y   GD+ +A    + M   GF  +V++Y  LI GLC+ 
Sbjct: 534 EQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKA 593

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           GR   A  L   + I+ + P+   Y+ +I    +   LRD  SL+  M + G  PDA+  
Sbjct: 594 GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTY 653

Query: 427 SLLINGL------MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            ++  GL      + +A  F  + V    +P    F  L +G
Sbjct: 654 KIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEG 695



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 2/167 (1%)

Query: 455 IFNTLMDGCCRLKRATDTVKLFM-LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
           +  + ++   RL+R  D V L    +  + ++ D   +  L+  +A    +     ++ +
Sbjct: 126 VVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNE 185

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M  RG+ PDV+T + +I  L +   +   + M + M  + VAPD   +  L+   I+E +
Sbjct: 186 MTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGS 245

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID-GYFKSQI 619
           ++AAL++  ++ + G  P  +T N +I GYC +       GY + +I
Sbjct: 246 IEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEI 292


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 232/467 (49%), Gaps = 12/467 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAM---RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVI 205
           L+  L D N   +  +L   M   RG G       Y  ++NG  ++G  + A+  + +++
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            R   P++VT + I+  LC    +  A  +   ++  G  PN +T++++++ +C   + +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A      M    + PD++ Y+ L+D L K GR  E  ++  +   RGL+ D+  + +++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
             Y   G +       D M+  G  P+   ++ILI    +Q ++ EA  +F ++    L 
Sbjct: 344 QGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLN 403

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P+++TY ++I   CKSG + D    ++ MI  GL P+ +V + LI+ L        A   
Sbjct: 404 PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL 463

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             + +   +  N   FN+++   C+  R  ++ KLF LM    +KP+VIT++ LI G   
Sbjct: 464 ILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCL 523

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G +  A  L   M   G+ PD +TY+ +I+G  +   +   L +FK M  +GV+P+I  
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           YN++L  L       AA +L+  +T  G + ++ TYN I+ G C  N
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNN 630



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 242/496 (48%), Gaps = 53/496 (10%)

Query: 162 SVGQYYKLCRAMRGK---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           +V +Y ++ RA  GK       Y  L+    R G ++  F     V+++GF    +T   
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 219 ILKRLCINGQIGNASSLFDVLLL----VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           +LK LC + +  +A    D++L     +   P+V + + L+   C E + ++A +L ++M
Sbjct: 128 LLKGLCADKRTSDA---MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184

Query: 275 ME---MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
            +       PD++ Y+ +I+G FK G   +        LDR +  DVV +SS++ A    
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
             + +A++    M+  G +PN ++Y+ ++ G C   +  EA G   ++    +EP ++TY
Sbjct: 245 QAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTY 304

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-AVVCSLL----INGLMGDALRFFFQSVR 446
           +SL+D  CK+G+  +   ++D+M KRGL+PD A  C+LL      G + +        VR
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR 364

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             + P+  +FN L+    + ++  + + +F  M  + + P+V+T+  +I  +   GS+  
Sbjct: 365 NGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDD 424

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGL--------------------------------- 533
           A+L F QM+  GLTP++I Y+++IH L                                 
Sbjct: 425 AMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIH 484

Query: 534 --FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
              K   +     +F LM R GV P++  Y+ L++       +D A KL   +   G++P
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544

Query: 592 DIITYNTIICGYCSLN 607
           D +TYNT+I GYC ++
Sbjct: 545 DCVTYNTLINGYCRVS 560



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 248/494 (50%), Gaps = 13/494 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  + + G  D++   +  M D  I  SPD+V    +++ L    ++ +  ++   
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRRI--SPDVVTYSSIIAALCKGQAMDKAMEVLTT 256

Query: 173 MRGKGF---CV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G    C+ Y  +++G       + A    +++   G  P++VT N ++  LC NG+
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +FD +   G +P++ T+ TL+  +  +  L +   L +LM+   + PD  +++I
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    K  ++ E   +       GL  +VV + +V+      G V  A+  +++M++ G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN+I Y+ LI  LC   +  +A  L  ++L R +  + + ++S+I   CK G++ +  
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D M++ G+KP+ +  S LI+G      M +A +       + + P+   +NTL++G 
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           CR+ R  D + LF  M    + P++IT+ ++++G+      ++A  L+  + K G   ++
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ I+HGL K       L MF+ +    +  +   +N+++  L+K    D A  LF  
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 676

Query: 584 LTDRGLEPDIITYN 597
           L+  GL PD+ TY+
Sbjct: 677 LSANGLVPDVRTYS 690



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 222/474 (46%), Gaps = 13/474 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y    +  E++     M   G+   PD+V    LM  L  +    +  K+  +
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGV--EPDVVTYNSLMDYLCKNGRSTEARKIFDS 326

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L+ G   KG +     +   +++ G  P+    N ++       +
Sbjct: 327 MTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEK 386

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +   G  PNVVT+  +I   CK   ++ A   +  M++  L P++I+Y+ 
Sbjct: 387 VDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 446

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L    +  +  EL+L  LDRG+ L+ + F+S++ ++   G V  + + +D M+  G
Sbjct: 447 LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNVI+YS LI G C  G++ EA  L   +    ++P  +TY++LI+G+C+  ++ D  
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+  M+  G+ P+ +  ++++ GL        A   +    +      L  +N ++ G 
Sbjct: 567 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+     + +++F  + + +++ +  T  ++I  +   G    A  LF  +   GL PDV
Sbjct: 627 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 686

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            TYS +   L +   +     +F  ME NG   +  + N ++  L++  ++  A
Sbjct: 687 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 195/405 (48%), Gaps = 20/405 (4%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---DLVPDLIIYS 287
           +A  +F+ LL  G   ++   +  +    + +    A   YN M       + P +  Y 
Sbjct: 33  DARHVFEELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLN 346
           ILI    +AGRL  G   L   + +G +++ + F+ ++           A+     RM  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR---LEPSLLTYSSLIDGFCKSGK 403
              +P+V S +IL+KGLC + R  EA  L   +   R     P +++Y+++I+GF K G 
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
               +S Y  M+ R + PD V  S +I  L     M  A+      V+  ++PN   +N+
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C  ++  + +     M    ++PDV+T+  L+  +   G  + A  +F  M KRG
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           L PD+ TY  ++ G +  K   V +H +  LM RNG+ PD  ++N+L+    K+  +D A
Sbjct: 332 LEPDIATYCTLLQG-YATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 578 LKLFGQLTDRGLEPDIITYNTII---CGYCSLNSCLIDGYFKSQI 619
           + +F ++   GL P+++TY  +I   C   S++  ++  YF+  I
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML--YFEQMI 433



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 100/238 (42%), Gaps = 44/238 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV------QRLMSCLVDSNSVGQYYK 168
           Y+ LI  Y R+ ++D+++ +F  M   G+  SP+++      Q L      + +   Y  
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGV--SPNIITYNIILQGLFHTRRTAAAKELYVG 606

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + ++        Y  +++GL +  + + A  M                            
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRM---------------------------- 638

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
                  F  L L   +    TF+ +I A  K  + ++A  L+  +    LVPD+  YS+
Sbjct: 639 -------FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 691

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + + L + G L+E ++L L+  + G   +  + +S++   +  GD+ RA  TY  M++
Sbjct: 692 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA-GTYLSMID 748


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 264/555 (47%), Gaps = 26/555 (4%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSF--LIENYVRIGK 127
           +I VL +++  D A  +F+++               DS     C Y++  +I  Y  +GK
Sbjct: 313 MIGVLCKAERVDEAVELFEEL---------------DSNKSVPCVYAYNTMIMGYGSVGK 357

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR---GKGFCVYEFL 184
            +E+  +       G   S      +++CL     V +  ++  AM+         Y  L
Sbjct: 358 FNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNIL 417

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++ L + G +E A  +   + + G  PNI+T N ++ RLC   ++  A S+F  L     
Sbjct: 418 IDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVC 477

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
            P+ VTF +LI+   +  K+  A+ LY  M++    P+ ++Y+ LI   FK GR ++G++
Sbjct: 478 TPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHK 537

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +    + RG   D+++ ++ MD     G++ +    ++ +   G  P+V SYSILI GL 
Sbjct: 538 IYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLV 597

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + G   +   LF ++  + L      Y+ +IDGFCKSGK+   + L + M  +GL+P  V
Sbjct: 598 KGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVV 657

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
               +I+GL     + +A   F ++    +  N+ ++++L+DG  ++ R  +   +   +
Sbjct: 658 TYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEEL 717

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               + P+  T   L+  +     +  A++ F  M      P+ +TYS +++GL K +  
Sbjct: 718 MQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKF 777

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +     ++ M++ G+ P+   Y  +++ L +  N+  A  LF +    G  PD   YN +
Sbjct: 778 NKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAM 837

Query: 600 ICGYCSLNSCLIDGY 614
           I G  + N  + D Y
Sbjct: 838 IEGLSNANKAM-DAY 851



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 250/503 (49%), Gaps = 14/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+  I+ + ++GK+D + + F  +   G  L PD V    ++  L  +  V +  +L   
Sbjct: 275 YNVCIDCFGKVGKVDMAWKFFHELKSQG--LVPDDVTFTSMIGVLCKAERVDEAVELFEE 332

Query: 173 MRGKGF--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +       CVY +  ++ G    G    A+ +  +  ++G +P+++  N IL  L   G+
Sbjct: 333 LDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGK 392

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  + + + +    PN+ +++ LI+  CK  +LE A ++ + M E  L P++I  +I
Sbjct: 393 VEEALRILEAMKM-DAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNI 451

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +ID L KA RL E   + L    +    D V F S++D     G V  A   Y++ML+ G
Sbjct: 452 MIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSG 511

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN + Y+ LI+   + GR  +   ++ +++ R   P L+  ++ +D   K+G++  G 
Sbjct: 512 QTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGR 571

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L++ +  +GL PD    S+LI+GL+      D  + F++     L  +   +N ++DG 
Sbjct: 572 ALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGF 631

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +     +L   M    ++P V+T+  +I G+A    L  A +LF +   + +  +V
Sbjct: 632 CKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNV 691

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + YS++I G  K   I     + + + + G+ P+   +N LL+ L+K   +D AL  F  
Sbjct: 692 VVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQN 751

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + +    P+ +TY+ ++ G C +
Sbjct: 752 MKNLKCPPNEVTYSIMVNGLCKV 774



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 225/497 (45%), Gaps = 35/497 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI       + D  + +   M ++G  ++  L   L+        V     L   M+
Sbjct: 205 YTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMK 264

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
              F     +Y   ++   + G ++ A+    ++  +G VP+ VT   ++  LC   ++ 
Sbjct: 265 SNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVD 324

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF+ L      P V  ++T+I  +    K  +A+ L         +P +I Y+ ++
Sbjct: 325 EAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCIL 384

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L + G+++E   +L  A+      ++  ++ ++D     G++  A++  D M   G  
Sbjct: 385 TCLGRKGKVEEALRIL-EAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLF 443

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN+I+ +I+I  LC+  RL EAC +F  +  +   P  +T+ SLIDG  + GK+ D + L
Sbjct: 444 PNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYML 503

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           Y+ M+  G  P+AVV + LI        R FF                      +  R  
Sbjct: 504 YEKMLDSGQTPNAVVYTSLI--------RNFF----------------------KCGRKE 533

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D  K++  M      PD++     +  +   G +     LF ++  +GLTPDV +YS +I
Sbjct: 534 DGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILI 593

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           HGL KG        +F  M+  G+  D   YN++++   K   ++ A +L  ++  +GL+
Sbjct: 594 HGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQ 653

Query: 591 PDIITYNTIICGYCSLN 607
           P ++TY ++I G   ++
Sbjct: 654 PTVVTYGSVIDGLAKID 670



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/463 (21%), Positives = 207/463 (44%), Gaps = 41/463 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+  + R   +E    +  ++   GF P+  TC +++     + ++  A  + + +
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                +P    ++TLI A     + +    L   M E+     + +++ LI    + GR+
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                LL          D+V+++  +D +  +G V  A + +  + + G +P+ ++++ +
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC+  R+ EA  LF ++   +  P +  Y+++I G+   GK  + +SL +   ++G 
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMT-------------------------- 448
            P  +  + ++      G + +ALR   ++++M                           
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALR-ILEAMKMDAAPNLTSYNILIDMLCKAGELEAALK 432

Query: 449 ---------LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                    L PN+   N ++D  C+ +R  +   +F+ +      PD +T   LI G+ 
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLG 492

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G ++ A +L+ +ML  G TP+ + Y+++I   FK      G  ++K M   G +PD+ 
Sbjct: 493 RHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLM 552

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           + N  ++ + K   ++    LF ++  +GL PD+ +Y+ +I G
Sbjct: 553 LLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHG 595



 Score = 42.7 bits (99), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 42/208 (20%), Positives = 78/208 (37%), Gaps = 5/208 (2%)

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT-LIPN 452
           ++D +     L D  + +D M +    P+ VV  +     +  AL +F    R T  + +
Sbjct: 76  VLDTYPWGAALEDALNTFDEMPQ----PELVVGVIRRLKDVRVALHYFRWVERKTKQLHS 131

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              +N L+    R +      ++   M M    P   T   ++        L  A  +  
Sbjct: 132 PEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIE 191

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            M K    P    Y+ +I  L         L + + M+  G    + ++  L+ +  +E 
Sbjct: 192 TMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREG 251

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTII 600
            +DAAL L  ++       D++ YN  I
Sbjct: 252 RVDAALSLLDEMKSNSFNADLVLYNVCI 279


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 217/421 (51%), Gaps = 23/421 (5%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++ + GF P +VT N +L  LC+  ++  A  LF  +     KPNVVTF+TL+N  C+E 
Sbjct: 40  KLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC----KPNVVTFTTLMNGLCREG 95

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVVVF 321
           ++ +A  L + M+E  L P+ I Y  ++DG+ K G       LL    +   +K DVV++
Sbjct: 96  RVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIY 155

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           S+++D     G    A   +  M + G  P++++YS +I G C  G+  EA  L  ++L+
Sbjct: 156 SAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLV 215

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           R++ P ++T+S LI+   K G L     L   MI  G+ P+ V C+ L++GL     + D
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKD 275

Query: 437 ALRFFFQSVRMTLI------------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           AL  F ++++ +++            P++  +N L+ G     +  +  +L+  M    I
Sbjct: 276 ALEMF-KAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 334

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PD +T++ +I G+  Q  L  A  +F  M  +  +P+++T++ +I G  K   +  GL 
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +F  M R G+  +   Y  L+    K  N++ +L +F ++   G+ PD IT   ++ G  
Sbjct: 395 LFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLW 454

Query: 605 S 605
           S
Sbjct: 455 S 455



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 226/458 (49%), Gaps = 20/458 (4%)

Query: 113 CD-YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           CD YSF  LI+ +    K+  ++  F  ++ +G + +      L+  L   + V +   L
Sbjct: 13  CDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDL 72

Query: 170 CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              M       +  LMNGL R+G +  A  +  ++++ G  PN +T   I+  +C  G  
Sbjct: 73  FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 230 GNASSLFDVLL-LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            +A +L   +  L   KP+VV +S +I+   K+ +   A  L+  M +  + PD++ YS 
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+G   +G+  E   LL   L R +  DVV FS +++A V  GD+  A      M++ G
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQV-----------LIRRLEPSLLTYSSLIDG 397
             PNV++ + L+ GLC  G+L +A  +F  +               +EP + TY+ LI G
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
               GK  +   LY+ M  RG+ PD V  S +INGL     + +A + F      +  PN
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  FNTL+ G C+     D ++LF  MG   I  + IT+  LIRG    G+++ ++ +F 
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +M+  G+ PD IT   ++ GL+  + +   L M + ++
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 218/409 (53%), Gaps = 21/409 (5%)

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           +I + N ++K  C   ++  A S F  L  +G  P +VTF+TL++  C E ++ +A  L+
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           + M +    P+++ ++ L++GL + GR+ E   LL   ++ GL+ + + + +++D    +
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 332 GDVGRAVQTYDRMLNGGFL-PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
           GD   A+    +M     + P+V+ YS +I GL + GR  +A  LF ++  + + P ++T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSV 445
           YS +I+GFC SGK  +   L   M+ R + PD V  S LIN L+  GD   A     + +
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM-----------GMYNIKPDVITHTVL 494
              + PN+   NTL+DG C   +  D +++F  M               ++PDV T+ +L
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+ ++G    A  L+ +M  RG+ PD +TYS++I+GL K   +     MF  M     
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           +P+I  +N L+    K   +D  L+LF ++  RG+  + ITY T+I G+
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGF 418



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 232/454 (51%), Gaps = 23/454 (5%)

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L++   SC     ++  + KL +         +  L++GL  +  +  A  +  Q+ +  
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK-- 78

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN+VT   ++  LC  G++  A +L D ++  G +PN +T+ T+++  CK      A 
Sbjct: 79  --PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 269 QLYNLMMEMDLV-PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            L   M E+  + PD++IYS +IDGL+K GR  +   L +   D+G+  D+V +S +++ 
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +   G    A +    ML     P+V+++S LI  L ++G L  A  L  +++   + P+
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIK-----------RGLKPDAVVCSLLINGLMGD 436
           ++T ++L+DG C SGKL+D   ++  M K            G++PD    ++LI+GL+ +
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316

Query: 437 -----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
                A   + +     ++P+   ++++++G C+  R  +  ++F  MG  +  P+++T 
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             LI G    G +   + LF +M +RG+  + ITY  +I G  K  NI+  L +F+ M  
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMIS 436

Query: 552 NGVAPD-IAIYNVLLNMLIKECNLDAALKLFGQL 584
           +GV PD I I N+L  +  KE  L  AL +  +L
Sbjct: 437 SGVYPDTITIRNMLTGLWSKE-ELKRALAMLEEL 469



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 158/298 (53%), Gaps = 37/298 (12%)

Query: 310 LDRGLKL--DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
           +  GL++  D+  F+ ++  +     +  A+ T+ ++   GF P +++++ L+ GLC + 
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           R+ EA  LF Q+     +P+++T+++L++G C+ G++ +  +L D M++ GL+P+ +   
Sbjct: 65  RVSEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQIT-- 118

Query: 428 LLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG-MYNIKP 486
                                       + T++DG C++      + L   M  + +IKP
Sbjct: 119 ----------------------------YGTIVDGMCKMGDTVSALNLLRKMEELSHIKP 150

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           DV+ ++ +I G+   G  + A  LF +M  +G+ PD++TYS +I+G       S    + 
Sbjct: 151 DVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLL 210

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + M    ++PD+  ++ L+N L+KE +L++A  L  ++   G+ P+++T NT++ G C
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLC 268



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 164/349 (46%), Gaps = 18/349 (5%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVD 159
           R+  D L      Y  +++   ++G    ++ +   M ++  ++ PD+V    ++  L  
Sbjct: 106 RMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELS-HIKPDVVIYSAIIDGLWK 164

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
                    L   M+ KG       Y  ++NG    G    A  + ++++ R   P++VT
Sbjct: 165 DGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVT 224

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM- 274
            + ++  L   G + +A  L   ++  G  PNVVT +TL++  C   KL+ A +++  M 
Sbjct: 225 FSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQ 284

Query: 275 ---MEMDLV-------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
              M++D         PD+  Y+ILI GL   G+  E  EL      RG+  D V +SS+
Sbjct: 285 KSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSM 344

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           ++       +  A Q +D M +  F PN+++++ LI G C+ G + +   LF ++  R +
Sbjct: 345 INGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGI 404

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             + +TY +LI GF K G +     ++  MI  G+ PD +    ++ GL
Sbjct: 405 VANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 4/124 (3%)

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            I  D+ +  +LI+   S   L  A+  F ++ K G  P ++T++ ++HGL     +S  
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L +F  M      P++  +  L+N L +E  +  A+ L  ++ + GL+P+ ITY TI+ G
Sbjct: 70  LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 603 YCSL 606
            C +
Sbjct: 126 MCKM 129


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 217/421 (51%), Gaps = 23/421 (5%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++ + GF P +VT N +L  LC+  ++  A  LF  +     KPNVVTF+TL+N  C+E 
Sbjct: 40  KLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC----KPNVVTFTTLMNGLCREG 95

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVVVF 321
           ++ +A  L + M+E  L P+ I Y  ++DG+ K G       LL    +   +K DVV++
Sbjct: 96  RVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIY 155

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           S+++D     G    A   +  M + G  P++++YS +I G C  G+  EA  L  ++L+
Sbjct: 156 SAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLV 215

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           R++ P ++T+S LI+   K G L     L   MI  G+ P+ V C+ L++GL     + D
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKD 275

Query: 437 ALRFFFQSVRMTLI------------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           AL  F ++++ +++            P++  +N L+ G     +  +  +L+  M    I
Sbjct: 276 ALEMF-KAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 334

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PD +T++ +I G+  Q  L  A  +F  M  +  +P+++T++ +I G  K   +  GL 
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +F  M R G+  +   Y  L+    K  N++ +L +F ++   G+ PD IT   ++ G  
Sbjct: 395 LFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLW 454

Query: 605 S 605
           S
Sbjct: 455 S 455



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 226/458 (49%), Gaps = 20/458 (4%)

Query: 113 CD-YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           CD YSF  LI+ +    K+  ++  F  ++ +G + +      L+  L   + V +   L
Sbjct: 13  CDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDL 72

Query: 170 CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              M       +  LMNGL R+G +  A  +  ++++ G  PN +T   I+  +C  G  
Sbjct: 73  FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 230 GNASSLFDVLL-LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            +A +L   +  L   KP+VV +S +I+   K+ +   A  L+  M +  + PD++ YS 
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+G   +G+  E   LL   L R +  DVV FS +++A V  GD+  A      M++ G
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQV-----------LIRRLEPSLLTYSSLIDG 397
             PNV++ + L+ GLC  G+L +A  +F  +               +EP + TY+ LI G
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
               GK  +   LY+ M  RG+ PD V  S +INGL     + +A + F      +  PN
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  FNTL+ G C+     D ++LF  MG   I  + IT+  LIRG    G+++ ++ +F 
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +M+  G+ PD IT   ++ GL+  + +   L M + ++
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 218/409 (53%), Gaps = 21/409 (5%)

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           +I + N ++K  C   ++  A S F  L  +G  P +VTF+TL++  C E ++ +A  L+
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           + M +    P+++ ++ L++GL + GR+ E   LL   ++ GL+ + + + +++D    +
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 332 GDVGRAVQTYDRMLNGGFL-PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
           GD   A+    +M     + P+V+ YS +I GL + GR  +A  LF ++  + + P ++T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSV 445
           YS +I+GFC SGK  +   L   M+ R + PD V  S LIN L+  GD   A     + +
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM-----------GMYNIKPDVITHTVL 494
              + PN+   NTL+DG C   +  D +++F  M               ++PDV T+ +L
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+ ++G    A  L+ +M  RG+ PD +TYS++I+GL K   +     MF  M     
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           +P+I  +N L+    K   +D  L+LF ++  RG+  + ITY T+I G+
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGF 418



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 232/454 (51%), Gaps = 23/454 (5%)

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L++   SC     ++  + KL +         +  L++GL  +  +  A  +  Q+ +  
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK-- 78

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN+VT   ++  LC  G++  A +L D ++  G +PN +T+ T+++  CK      A 
Sbjct: 79  --PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 269 QLYNLMMEMDLV-PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            L   M E+  + PD++IYS +IDGL+K GR  +   L +   D+G+  D+V +S +++ 
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +   G    A +    ML     P+V+++S LI  L ++G L  A  L  +++   + P+
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIK-----------RGLKPDAVVCSLLINGLMGD 436
           ++T ++L+DG C SGKL+D   ++  M K            G++PD    ++LI+GL+ +
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316

Query: 437 -----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
                A   + +     ++P+   ++++++G C+  R  +  ++F  MG  +  P+++T 
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             LI G    G +   + LF +M +RG+  + ITY  +I G  K  NI+  L +F+ M  
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMIS 436

Query: 552 NGVAPD-IAIYNVLLNMLIKECNLDAALKLFGQL 584
           +GV PD I I N+L  +  KE  L  AL +  +L
Sbjct: 437 SGVYPDTITIRNMLTGLWSKE-ELKKALAMLEEL 469



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 158/298 (53%), Gaps = 37/298 (12%)

Query: 310 LDRGLKL--DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
           +  GL++  D+  F+ ++  +     +  A+ T+ ++   GF P +++++ L+ GLC + 
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           R+ EA  LF Q+     +P+++T+++L++G C+ G++ +  +L D M++ GL+P+ +   
Sbjct: 65  RVSEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQIT-- 118

Query: 428 LLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG-MYNIKP 486
                                       + T++DG C++      + L   M  + +IKP
Sbjct: 119 ----------------------------YGTIVDGMCKMGDTVSALNLLRKMEELSHIKP 150

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           DV+ ++ +I G+   G  + A  LF +M  +G+ PD++TYS +I+G       S    + 
Sbjct: 151 DVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLL 210

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + M    ++PD+  ++ L+N L+KE +L++A  L  ++   G+ P+++T NT++ G C
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLC 268



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 164/349 (46%), Gaps = 18/349 (5%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVD 159
           R+  D L      Y  +++   ++G    ++ +   M ++  ++ PD+V    ++  L  
Sbjct: 106 RMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELS-HIKPDVVIYSAIIDGLWK 164

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
                    L   M+ KG       Y  ++NG    G    A  + ++++ R   P++VT
Sbjct: 165 DGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVT 224

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM- 274
            + ++  L   G + +A  L   ++  G  PNVVT +TL++  C   KL+ A +++  M 
Sbjct: 225 FSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQ 284

Query: 275 ---MEMDLV-------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
              M++D         PD+  Y+ILI GL   G+  E  EL      RG+  D V +SS+
Sbjct: 285 KSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSM 344

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           ++       +  A Q +D M +  F PN+++++ LI G C+ G + +   LF ++  R +
Sbjct: 345 INGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGI 404

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             + +TY +LI GF K G +     ++  MI  G+ PD +    ++ GL
Sbjct: 405 VANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 4/124 (3%)

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            I  D+ +  +LI+   S   L  A+  F ++ K G  P ++T++ ++HGL     +S  
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L +F  M      P++  +  L+N L +E  +  A+ L  ++ + GL+P+ ITY TI+ G
Sbjct: 70  LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 603 YCSL 606
            C +
Sbjct: 126 MCKM 129


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/595 (24%), Positives = 274/595 (46%), Gaps = 37/595 (6%)

Query: 33  NQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDK 89
           N ANA L  LI  ++   A +      +   +P++    +LI  L +      A+ V  +
Sbjct: 44  NPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVL-R 102

Query: 90  MVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD- 148
              + G   + F             Y+ L+  Y R G++D +  + A M      ++PD 
Sbjct: 103 AAERSGTAVDVFA------------YNTLVAGYCRYGQLDAARRLIASMP-----VAPDA 145

Query: 149 -LVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQ 203
                ++  L D   VG+   L   M  +G       Y  L+  + +      A  +  +
Sbjct: 146 YTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDE 205

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +  +G  PNIVT N I+  +C  G++ +A    + L   G +P+ V+++T++   C   +
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
            E   +L+  MME + +P+ + + +L+    + G ++   ++L      G   +  + + 
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           V++     G V  A Q  + M + G  P+ ISY+ ++KGLC+  R  +A  L  +++ + 
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
             P+ +T+++ I   C+ G +     L + M + G + + V  + L+NG      +  AL
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F+    M   PN   + TL+ G C  +R     +L   M   +  P+V+T  VL+   
Sbjct: 446 ELFYS---MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
             +G +  AI L  QM++ G TP++ITY+ ++ G+    N    L +   +  NGV+PDI
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDI 562

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
             Y+ ++ +L +E  ++ A+K+F  + D G+ P  + YN I+   C    C  DG
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK--RCNTDG 615



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 236/497 (47%), Gaps = 12/497 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I      G++ E++ +   M   G   S      L+  +  S   GQ  ++   MR
Sbjct: 148 YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  ++NG+ R+G +++A     ++   GF P+ V+   +LK LC   +  
Sbjct: 208 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 267

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +   LF  ++     PN VTF  L+  FC+   +E+A Q+   M       +  + +I+I
Sbjct: 268 DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVI 327

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + + K GR+ +  + L      G   D + +++V+           A +    M+     
Sbjct: 328 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 387

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN ++++  I  LCQ+G + +A  L  Q+     E +++TY++L++GFC  G++     L
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 447

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + +M     KP+ +  + L+ GL     +  A     + ++    PN+  FN L+   C+
Sbjct: 448 FYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 504

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                + ++L   M  +   P++IT+  L+ GI +  +   A+ L   ++  G++PD++T
Sbjct: 505 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVT 564

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           YS+II  L +   +   + MF +++  G+ P   IYN +L  L K CN D A+  F  + 
Sbjct: 565 YSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV 624

Query: 586 DRGLEPDIITYNTIICG 602
             G  P+ +TY T+I G
Sbjct: 625 SNGCMPNELTYITLIEG 641



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 160/328 (48%), Gaps = 13/328 (3%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           + +I    + G++D++   F ++++MG Y  SPD +    ++  L  +       +L + 
Sbjct: 324 NIVINTICKQGRVDDA---FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 173 MRGKGFCVYEFLMNG----LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  K     E   N     L +KG+IE A  +  Q+ + G   NIVT N ++   C+ G+
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  LF  +     KPN +T++TL+   C   +L+ A +L   M++ D  P+++ +++
Sbjct: 441 VDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+    + G + E  EL+   ++ G   +++ +++++D      +   A++    +++ G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++++YS +I  L ++ R+ EA  +F  V    + P  + Y+ ++   CK        
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD 436
             +  M+  G  P+ +    LI GL  +
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANE 645



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 155/338 (45%), Gaps = 13/338 (3%)

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           + + G+  + F+ F +++G +GC      Y+ +++   R  + +++ E+   M       
Sbjct: 330 ICKQGRVDDAFQ-FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMH 201
           +       +  L     + Q   L   M   G       Y  L+NG   +G +++A  + 
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
             +  +   PN +T   +L  LC   ++  A+ L   +L     PNVVTF+ L++ FC++
Sbjct: 449 YSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
             +++A +L   MME    P+LI Y+ L+DG+      +E  ELL   +  G+  D+V +
Sbjct: 506 GLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTY 565

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           SS++        V  A++ +  + + G  P  + Y+ ++  LC++     A   F  ++ 
Sbjct: 566 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 625

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
               P+ LTY +LI+G      L++   L   +  RG+
Sbjct: 626 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/593 (24%), Positives = 277/593 (46%), Gaps = 49/593 (8%)

Query: 38  ILANLIKTNNPTPAIQFFK-WTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQ 93
           ++  L        A++ F+    +C  +P++     L+H L ++   D A  +  +MV Q
Sbjct: 98  LMKGLCDAGRVVEALEHFRAMAKDC--APDVMTYTALVHALCKAGKFDEAQGMLREMVAQ 155

Query: 94  FGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
                             GC      +S LI+   + G  +++  +   +   G+  S  
Sbjct: 156 ------------------GCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDA 197

Query: 149 LVQRLMSCLVDS-NSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQ 203
             + ++  L +  NSV    K+   +  KGF     ++  ++NG  +   +++A+ +   
Sbjct: 198 AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEV 257

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +I++G VPN+ T   ++  LC   ++G A  L + +++ G  PNVVT+ST+IN  CK+ +
Sbjct: 258 MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQ 317

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           ++ A++L+ LM   +  P+++ ++ILIDGL KA R++E  +L     + G   D++ ++S
Sbjct: 318 VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 377

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGF-LPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           ++D       V  A Q +  +   G    N ++YS L  G    GR+ +AC +F  ++ +
Sbjct: 378 LIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 437

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----A 437
              P L TY+SLI  +CK+ +  +   L + M  +G  P     S ++ GL        A
Sbjct: 438 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERA 497

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY------NIKPDVITH 491
           ++ F          +  I+N +++G   + RA+   K   ++            P     
Sbjct: 498 IQLFDSMAARGCTDDALIYNLVVEG---MARASKHDKALAVLEQVIDKRDRKFNPSSSAV 554

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             L+  +   G    A  L  +M +RG    V +Y+ ++ GL + +       +F+ M  
Sbjct: 555 DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVS 614

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            G AP+I+  NV+++ L     +D A +L  +++  G  PDI T NT+I GYC
Sbjct: 615 AGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 667



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 251/510 (49%), Gaps = 21/510 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           ++ L++     G++ E++E F  M+      +PD++    L+  L  +    +   + R 
Sbjct: 95  HTTLMKGLCDAGRVVEALEHFRAMAK---DCAPDVMTYTALVHALCKAGKFDEAQGMLRE 151

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN-G 227
           M  +G       +  L++GL + G  E AF +   VIQRG   +      I++RLC    
Sbjct: 152 MVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYN 211

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            +  AS +  V++  G  P V+ F+ +IN FCK   L+ A++L  +M+E   VP++  ++
Sbjct: 212 SVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFT 271

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ILI GL KA R+ E  +LL   +  G   +VV +S+V++     G V  A + +  M   
Sbjct: 272 ILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERR 331

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              PNV++++ILI GLC+  R+ EA  L+ ++      P ++TY+SLIDG CKS ++ + 
Sbjct: 332 NCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEA 391

Query: 408 FSLYDNMIKRGLK-PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
           F L+  + + G+   +AV  S L +G      M DA R F   V     P+L  + +L+ 
Sbjct: 392 FQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLIL 451

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C+  RA + V+L   M      P V T + ++ G+        AI LF  M  RG T 
Sbjct: 452 EYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTD 511

Query: 522 DVITYSAIIHGLFKG----KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           D + Y+ ++ G+ +     K ++V   +    +R    P  +  + L+  L +    D A
Sbjct: 512 DALIYNLVVEGMARASKHDKALAVLEQVIDKRDRK-FNPSSSAVDALVESLCQVGKTDDA 570

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            +L  ++++RG    + +YN ++ G   L 
Sbjct: 571 KQLLHKMSERGFAAAVSSYNRLLSGLSRLQ 600



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 224/465 (48%), Gaps = 43/465 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+ G    G ++ A  +  ++   GF  N V    ++K LC  G++  A   F   
Sbjct: 59  TYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRA- 117

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +     P+V+T++ L++A CK  K ++A  +   M+     PD + +S LIDGL K G  
Sbjct: 118 MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSE 177

Query: 300 KEGNELLLTALDRGL------------------------------------KLDVVVFSS 323
           ++   +L   + RG+                                       V++F+ 
Sbjct: 178 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 237

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           V++ +    D+  A +  + M+  G +PNV +++ILI GLC+  R+ EA  L  ++++  
Sbjct: 238 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGG 297

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALR 439
             P+++TYS++I+G CK G++ D + L+  M +R   P+ V  ++LI+GL      +  R
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 357

Query: 440 FFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK-PDVITHTVLIRG 497
             +  +R T   P++  +N+L+DG C+  +  +  +LF  +    +   + +T++ L  G
Sbjct: 358 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 417

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
            A+ G ++ A  +F  ++ +G +PD+ TY+++I    K       + + + M   G  P 
Sbjct: 418 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 477

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +   + +L  L +  + + A++LF  +  RG   D + YN ++ G
Sbjct: 478 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG 522



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 187/366 (51%), Gaps = 11/366 (3%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           NV + +  ++  C+  + ++A  L+   M    +P+   Y ILI G   AG L    +LL
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD--RMLNGGFLPNVISYSILIKGLC 364
                 G + + VV +++M    G+ D GR V+  +  R +     P+V++Y+ L+  LC
Sbjct: 81  EEMKSSGFEGNAVVHTTLMK---GLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALC 137

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + G+  EA G+  +++ +   P  +T+S+LIDG CK G     F + +++I+RG+     
Sbjct: 138 KAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDA 197

Query: 425 VCSLLINGLMGD------ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
               +I  L         A +     +     P + +FN +++G C+ K      KL  +
Sbjct: 198 AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEV 257

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      P+V T T+LI G+     +  A  L  +M+  G +P+V+TYS +I+GL K   
Sbjct: 258 MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQ 317

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F+LMER    P++  +N+L++ L K   ++ A +L+ ++ + G  PDIITYN+
Sbjct: 318 VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 377

Query: 599 IICGYC 604
           +I G C
Sbjct: 378 LIDGLC 383



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 7/262 (2%)

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV S +  +  LC+  R  EA  LF   + R   P+  TY  LI GF  +G L     L 
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRF-----FFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + M   G + +AVV + L+ GL  DA R       F+++     P++  +  L+   C+ 
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLC-DAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKA 139

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  +   +   M      PD +T + LI G+   GS   A  +   +++RG+      +
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199

Query: 527 SAIIHGLF-KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
             II  L  K  ++ +   +  ++   G  P + ++N+++N   K  +LD+A KL   + 
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259

Query: 586 DRGLEPDIITYNTIICGYCSLN 607
           ++G  P++ T+  +I G C  N
Sbjct: 260 EKGCVPNVFTFTILITGLCKAN 281



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 1/169 (0%)

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            FF   R  +  N+F  N  +D  CRL R  + + LF         P+  T+ +LIRG +
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
           S G L  AI L  +M   G   + + ++ ++ GL     +   L  F+ M ++  APD+ 
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVM 127

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            Y  L++ L K    D A  +  ++  +G  PD +T++T+I G C   S
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGS 176



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 69/132 (52%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+  L + G  ++A  +  ++ +RGF   + + N++L  L    +   A+ +F+ ++  G
Sbjct: 557 LVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAG 616

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P P + T + +I+  C  AK++ A++L   M ++   PD+   + LI G  K+GR     
Sbjct: 617 PAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLAR 676

Query: 304 ELLLTALDRGLK 315
           +LL    + GL+
Sbjct: 677 KLLEEMTEAGLE 688



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 108/262 (41%), Gaps = 44/262 (16%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFK--WTHNCVSSPNIAQL-IHVLLQSDMRDVASHVF 87
           + N  +A+L  L + N+   AIQ F       C     I  L +  + ++   D A  V 
Sbjct: 477 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVL 536

Query: 88  DKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           ++++ +  + +N      D+          L+E+  ++GK D++ ++   MS+ G     
Sbjct: 537 EQVIDKRDRKFNPSSSAVDA----------LVESLCQVGKTDDAKQLLHKMSERGF---- 582

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
                       + +V  Y +               L++GL R    + A  +   ++  
Sbjct: 583 ------------AAAVSSYNR---------------LLSGLSRLQRWDEATQVFEAMVSA 615

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P I T N ++  LC   ++ +A  L   +  +G  P++ T +TLI  +CK  + + A
Sbjct: 616 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLA 675

Query: 268 FQLYNLMMEMDLVPDLIIYSIL 289
            +L   M E  L P+   + +L
Sbjct: 676 RKLLEEMTEAGLEPNDTTHDLL 697


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 242/461 (52%), Gaps = 12/461 (2%)

Query: 128  IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG--KG-FCVYEFL 184
            I ++V++F  M+  G+         L++ L  +   G   KL   M+G  KG    Y  +
Sbjct: 1032 IPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMI 1091

Query: 185  MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
            ++ L + G+   A  M  ++I  G +P++V  + ++  LC  G++  A   F  +   G 
Sbjct: 1092 IDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGI 1151

Query: 245  KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
              +V T+++LI+   +    ++     NLM++    PD   ++ILIDGL K G++ E  +
Sbjct: 1152 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 1211

Query: 305  LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
            +L     +G + D++ ++++M+    +G +  A + ++ + + G   NV SY+ILI G C
Sbjct: 1212 ILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 1271

Query: 365  QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG--LKPD 422
            +  ++ EA   F ++  + L+PS +TY++LI   C+SG++R    L+  M   G  LK  
Sbjct: 1272 KDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL- 1330

Query: 423  AVVCSLL----INGLMGDALRFFFQSVRMTL-IPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            +  C LL     NG + +A+  F QS++ T   PN+ +F+ L+DG CR  +  +  K F 
Sbjct: 1331 STYCVLLDGLCKNGHLEEAMDLF-QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 1389

Query: 478  LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
             +    ++PD I + +LI G+ ++G LS A+ L +QM ++G  PD IT++ II  L K  
Sbjct: 1390 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 1449

Query: 538  NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             I   + + + M     +PD A+ ++LL +   +    AAL
Sbjct: 1450 EIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAAL 1490



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 222/451 (49%), Gaps = 10/451 (2%)

Query: 160  SNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
             N +    +L   M  KG       Y  L+NGL +      A  +H + ++     ++ T
Sbjct: 1029 ENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEK-MKGNCKGDVFT 1087

Query: 216  CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
               I+  LC +G    A  +F  ++  G  P+VV +S+L++  C+  +L++A + +  M 
Sbjct: 1088 YGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 1147

Query: 276  EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
               +  D+  Y+ LI GL +AG  KE    L   +DRG   D   F+ ++D     G VG
Sbjct: 1148 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVG 1207

Query: 336  RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
             A Q  + M + G  P++++Y+ L+ GLC  G+L +A  LF  +  R ++ ++ +Y+ LI
Sbjct: 1208 EAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 1267

Query: 396  DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLI 450
            +G+CK  K+ + F  ++ M  +GLKP  V  + LI     +G +  A + F +       
Sbjct: 1268 NGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 1327

Query: 451  PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
              L  +  L+DG C+     + + LF  +     KP++   ++L+ G+   G L  A   
Sbjct: 1328 LKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 1387

Query: 511  FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
            F ++ K GL PD I Y+ +I+GL     +S  + +   ME  G  PD   +NV++  L+K
Sbjct: 1388 FDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK 1447

Query: 571  ECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            E  +  A++L  ++ +R   PD    + ++C
Sbjct: 1448 ENEIHEAIQLLEEMRNRNFSPDEAVTSMLLC 1478



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 207/406 (50%), Gaps = 6/406 (1%)

Query: 205  IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
            ++RGF P+ VT   ++K + +   I +A  LFD +   G   +  T+  LIN  CK  K 
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067

Query: 265  EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
              A +L+   M+ +   D+  Y ++ID L K G   E  ++    +  G+  DVVV+SS+
Sbjct: 1068 GLAIKLHE-KMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126

Query: 325  MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
            MD     G +  A++ +  M   G   +V +Y+ LI GL + G   E       ++ R  
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186

Query: 385  EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
             P   T++ LIDG CK GK+ +   + + M  +G +PD +  + L+NGL     + DA +
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246

Query: 440  FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
             F       +  N+F +N L++G C+ ++  +  + F  M    +KP  +T+  LI  + 
Sbjct: 1247 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALC 1306

Query: 500  SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
              G + +A  LF +M   G    + TY  ++ GL K  ++   + +F+ +++    P+I 
Sbjct: 1307 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIE 1366

Query: 560  IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            ++++LL+ + +   L+ A K F +++  GLEPD I YN +I G C+
Sbjct: 1367 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCN 1412



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 206/416 (49%), Gaps = 13/416 (3%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
            Y  +I+   + G   E++++F+ M   GI   PD+V    LM  L     + +  +  + 
Sbjct: 1088 YGMIIDALCKDGMTTEALDMFSEMIGAGIL--PDVVVYSSLMDGLCRFGRLKEALEFFKE 1145

Query: 173  MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            M G+G       Y  L++GL R G+ +        ++ RGF P+  T   ++  LC  G+
Sbjct: 1146 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 1205

Query: 229  IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            +G A  + +++   G +P+++T++TL+N  C   +LE A +L+  + +  +  ++  Y+I
Sbjct: 1206 VGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 1265

Query: 289  LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            LI+G  K  ++ E          +GLK   V +++++ A    G V  A + +  M   G
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325

Query: 349  FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
                + +Y +L+ GLC+ G L EA  LF  +     +P++  +S L+DG C++GKL + +
Sbjct: 1326 QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 1385

Query: 409  SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
              +D + K GL+PD +  ++LINGL     + +A++  +Q      +P+   FN ++   
Sbjct: 1386 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 1445

Query: 464  CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
             +     + ++L   M   N  PD    ++L+   +      +A++     L++G+
Sbjct: 1446 LKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 182/383 (47%), Gaps = 6/383 (1%)

Query: 228  QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            ++ +A  LFD  L   P P   TF+ L+ +  K       F +Y  + ++ + PDL   +
Sbjct: 926  KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985

Query: 288  ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            ILI        +  G  +    L RG + D V  ++++        +  AVQ +D M   
Sbjct: 986  ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045

Query: 348  GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
            G L +  +Y ILI GLC+  +   A  L  + +    +  + TY  +ID  CK G   + 
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLAIKLH-EKMKGNCKGDVFTYGMIIDALCKDGMTTEA 1104

Query: 408  FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
              ++  MI  G+ PD VV S L++GL     + +AL FF +     +  +++ +N+L+ G
Sbjct: 1105 LDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHG 1164

Query: 463  CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
              R     +      LM      PD  T T+LI G+  +G +  A  +   M  +G  PD
Sbjct: 1165 LSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPD 1224

Query: 523  VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            ++TY+ +++GL     +     +F+ +   G+  ++  YN+L+N   K+  +D A + F 
Sbjct: 1225 ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFE 1284

Query: 583  QLTDRGLEPDIITYNTIICGYCS 605
            ++  +GL+P  +TYNT+I   C 
Sbjct: 1285 EMRPKGLKPSTVTYNTLIGALCQ 1307


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 213/410 (51%), Gaps = 32/410 (7%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +   +++RGF  N+   N +LK LC N + G A SL   +      P+V +++T+I 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
            FC+  +LEKA +L N M        L+ + ILID   KAG++ E    L      GL+ 
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D+VV++S++  +   G++ R    +D +L  G  P  I+Y+ LI+G C+ G+L EA  +F
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
             ++ R + P++ TY+ LIDG C  GK ++     + MI++  +P+AV  +++IN L  D
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKD 365

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
            L                                D V++  LM     +PD IT+ +L+ 
Sbjct: 366 GL------------------------------VADAVEIVELMKKRRTRPDNITYNILLG 395

Query: 497 GIASQGSLSSAILLFFQMLKRG--LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           G+ ++G L  A  L + MLK      PDVI+Y+A+IHGL K   +   L ++ L+     
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A D    N+LLN  +K  +++ A++L+ Q++D  +  +  TY  +I G+C
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/594 (24%), Positives = 287/594 (48%), Gaps = 35/594 (5%)

Query: 28  SDLQFNQANAILANLIKTNNPTPAIQFFK---WTHNCVSSPNIAQLIHVLLQSDMRDVAS 84
           S L F  +N ++A L+++ N   A  F++    T   ++  +++ L+   +Q      A 
Sbjct: 69  SSLAFAGSN-LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAF 127

Query: 85  HVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
            V   ++++ G  +N +            +++ L++   R  +  ++V +   M      
Sbjct: 128 GVL-ALMLKRGFAFNVY------------NHNILLKGLCRNLECGKAVSLLREMRRNS-- 172

Query: 145 LSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL-----RKGVIENA 197
           L PD+     ++    +   + +  +L   M+G G C +  +  G+L     + G ++ A
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG-CSWSLVTWGILIDAFCKAGKMDEA 231

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
               +++   G   ++V    +++  C  G++    +LFD +L  G  P  +T++TLI  
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           FCK  +L++A +++  M+E  + P++  Y+ LIDGL   G+ KE  + L   +++  + +
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPN 351

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
            V ++ +++     G V  AV+  + M      P+ I+Y+IL+ GLC +G L EA  L  
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411

Query: 378 QVLIRR--LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
            +L      +P +++Y++LI G CK  +L     +YD ++++    D V  ++L+N    
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLK 471

Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            G +  A+  + Q     ++ N   +  ++DG C+         L   M +  ++P V  
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  L+  +  +GSL  A  LF +M +    PDV++++ +I G  K  +I     +   M 
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           R G++PD+  Y+ L+N  +K   LD A+  F ++ D G EPD    ++++  YC
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-KYC 644



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 125/260 (48%), Gaps = 6/260 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQY---YKL 169
           Y+ L+      G +DE+ ++   M     Y  PD++    L+  L   N + Q    Y L
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449

Query: 170 CRAMRGKGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
                G G  V    L+N  L+ G +  A  + +Q+     V N  T   ++   C  G 
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L   + +   +P+V  ++ L+++ CKE  L++A++L+  M   +  PD++ ++I
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +IDG  KAG +K    LL+     GL  D+  +S +++ ++ +G +  A+  +D+M++ G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629

Query: 349 FLPNVISYSILIKGLCQQGR 368
           F P+      ++K    QG 
Sbjct: 630 FEPDAHICDSVLKYCISQGE 649


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 213/421 (50%), Gaps = 30/421 (7%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L + L+R    +    + +Q+   G   ++++   ++   C    +    S+   ++ +G
Sbjct: 97  LFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLG 156

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNV+TFSTLIN FC E K+ +A +L+++M+     P++  YSI+I GL + G+  E  
Sbjct: 157 LEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVI 216

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +LL      G + DVV++++++D       V  AV  + +M   G LP V++Y+ LI GL
Sbjct: 217 KLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGL 276

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
              GR  EA GL  ++    + P L+ +S LID  CK G++ +   +   M + G++PD 
Sbjct: 277 RNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDV 336

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
                                           +NTLM+G C      +  K+F +M    
Sbjct: 337 AT------------------------------YNTLMNGYCLRMEVVEARKVFEVMISKG 366

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
             PDV + ++L+ G      +  A  LF +M  RGL PD ++Y+ +I GL + +      
Sbjct: 367 RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAE 426

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +FK M  NG  P++  Y++LL+ L K+  LD A+ LF  + + GL+PD++TYN +I G 
Sbjct: 427 ELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGM 486

Query: 604 C 604
           C
Sbjct: 487 C 487



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 232/473 (49%), Gaps = 9/473 (1%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEF 183
           I++++  F +M +     S      L S LV          L + M   G          
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N   R   ++  F +  ++I+ G  PN++T + ++   CI G+IG A  LFDV++  G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            KPNV ++S +I   C+  K  +  +L   M  +   PD++IY+ ++D L K   + E  
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +       G+   VV ++S++     +G    A    + M  G  +P+++++S+LI  +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G + EA  +   +    +EP + TY++L++G+C   ++ +   +++ MI +G  PD 
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              S+L+NG      + +A + F +     LIP+   +NTL+ G C+ +R  +  +LF  
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      P+++T+++L+  ++ QG L  A+ LF  M   GL PD++TY+ +I G+ K   
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
                 +F  +   G+ P+  +    ++ + K   LD A K F Q+      P
Sbjct: 492 FKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 181/411 (44%), Gaps = 34/411 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S LI  +   GKI  ++E+F  M   G   +      ++  L       +  KL   M+
Sbjct: 164 FSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMK 223

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      +Y  +++ L +  ++  A H+  ++   G +P +VT   ++  L   G+  
Sbjct: 224 VVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWK 283

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L + +      P++V FS LI+  CKE ++ +A  +   M EM + PD+  Y+ L+
Sbjct: 284 EAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM 343

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G      + E  ++    + +G   DV  FS +++ Y     +  A Q +D M + G +
Sbjct: 344 NGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLI 403

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ +SY+ LI GLCQ  R +EA  LF  +      P+L+TYS L+D   K G L     L
Sbjct: 404 PDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGL 463

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +  M   GLKPD                              L  +N ++DG C+  +  
Sbjct: 464 FRAMENSGLKPD------------------------------LVTYNIMIDGMCKYGKFK 493

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           D  +LF  + +  ++P+    T  I G+   G L  A   F QM K   +P
Sbjct: 494 DARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 146/277 (52%), Gaps = 5/277 (1%)

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           ++  A+  ++ M+N   LP+++ +  L   L +         L  Q+ +  +   +L+ +
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM 447
            LI+ FC+   +  GFS+   +IK GL+P+ +  S LING      +G A+  F   V  
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
              PN+  ++ ++ G CR+ + T+ +KL   M +   +PDV+ +  ++  +     ++ A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           + +F +M   G+ P V+TY+++IHGL           +   M+   + PD+  ++VL+++
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + KE  +  A  +   +T+ G+EPD+ TYNT++ GYC
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYC 347


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 222/442 (50%), Gaps = 40/442 (9%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++I+ G +P++  CN+IL+ L     +  A +++ ++   G KP VVT++T+++++CKE 
Sbjct: 170 KMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEG 229

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           ++++A +L + M E    P+ + Y++L++GL K G L++   L+   L+ GL +    ++
Sbjct: 230 RVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYN 289

Query: 323 SVMDAYVGIGDVGRA---------------VQTYDR--------------------MLNG 347
            +++ +   G    A               + TY+                     ML  
Sbjct: 290 PLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKS 349

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
            F P+++S++ L+ G C+ G + EA  LF ++  R L P+++TY++LI G C  G L   
Sbjct: 350 KFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAA 409

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L   M  +GL PD    ++L+N     G +  A  FF + +   L P+ F +NT + G
Sbjct: 410 LRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             ++   +    +   M      PDVIT+ V +  +  QG+   A  L   M+  GL PD
Sbjct: 470 EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPD 529

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +TY++II+G  K  ++     +F  M   GVAP +  Y VL++    +  LD A   F 
Sbjct: 530 HVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFS 589

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
           ++ ++ +  ++ITYN II G C
Sbjct: 590 KMLEKSVPANVITYNAIINGLC 611



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 223/469 (47%), Gaps = 44/469 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++++Y + G++D+++E+ + M + G Y +      L++ L     + Q   L   M 
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 277

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQR----------------------- 207
             G  V    Y  L+NG  +KG+   AF +  +++ R                       
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 337

Query: 208 ------------GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
                        F P+IV+ N +L   C  G I  A  LFD L      P V+T++TLI
Sbjct: 338 GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLI 397

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +  C    L+ A +L   M +  L PD+  Y+IL++G FK G +          L +GLK
Sbjct: 398 HGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK 457

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D   +++ +   + I D   A    + ML  GF P+VI+Y++ +  LCQQG   EAC L
Sbjct: 458 PDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 517

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--- 432
              ++   L P  +TY+S+I+GF K+G LR    +++ M+ +G+ P  V  ++LI+    
Sbjct: 518 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 577

Query: 433 --LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
             ++  A  +F + +  ++  N+  +N +++G C  +R  +  K F  M    I P+  +
Sbjct: 578 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 637

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
           +T+LI    + G    A+ L+ +ML R + PD  T+S  +  L +   +
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQV 686



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 188/374 (50%), Gaps = 5/374 (1%)

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +FD ++  G  P+V   + ++     E  L KA  +Y +M +  + P ++ Y+ ++D   
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K GR+ +  ELL    +RG   + V ++ +++     G++ +A    + MLN G   +  
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI G CQ+G  VEA  L  +++ RR  P+L TY++L+ G CK  ++      + +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 415 IKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           +K    PD V  + L+      G + +A   F +     L+P +  +NTL+ G C     
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              ++L   M    + PD+ T+T+L+ G    G +S A   F +ML +GL PD   Y+  
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  K  + SV   M + M   G  PD+  YNV ++ L ++ N + A  L   +   GL
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 590 EPDIITYNTIICGY 603
            PD +TY +II G+
Sbjct: 527 IPDHVTYTSIINGF 540



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 7/299 (2%)

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G+K  VV +++++D+Y   G V +A++    M   G  PN ++Y++L+ GL ++G L +A
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA 269

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            GL  ++L   L  S  TY+ LI+GFC+ G   + F L + M+ R   P     + L+ G
Sbjct: 270 KGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYG 329

Query: 433 L------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           L       G  LRF    ++    P++  FN+L+ G CR    ++   LF  +   ++ P
Sbjct: 330 LCKWVQVTGVRLRFS-DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
            VIT+  LI G+   G L +A+ L  +M  +GL PD+ TY+ +++G FK   +S+    F
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             M   G+ PD   YN  +   +K  +   A  +  ++   G  PD+ITYN  +   C 
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQ 507



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 57/95 (60%)

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           +L+F +M++ GL PDV   + I+  L     +S   +++ +ME+ G+ P +  YN +L+ 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             KE  +D AL+L  ++ +RG  P+ +TYN ++ G
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNG 259



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L +F  M RNG+ PD+   N +L +L  E  L  A  ++G +   G++P ++TYNT++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 603 YC 604
           YC
Sbjct: 225 YC 226


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 231/490 (47%), Gaps = 61/490 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L+E +V  G I+ ++ + A MS+MG   SP  V                        
Sbjct: 234 FTTLMEGFVEEGSIEAALRLKARMSEMGC--SPTSV------------------------ 267

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                    L+NG  + G + +A    +Q I  GF P+ VT +  +  LC NG + +A  
Sbjct: 268 -----TVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALK 322

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +  ++L  G +P+V T+ST+IN  C   +LE+A  + N M++   +PD   ++ LI  L 
Sbjct: 323 VLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALC 382

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
              +L+E  +L      +GL  +V  F+ +++A   +GD   AV+ ++ M + G  P+ +
Sbjct: 383 TENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEV 442

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ILI  LC  G+L +A  L  ++ +     S +TY+++IDG CK  ++ +   ++D M
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM 502

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
              G+  +A+                               FNTL+DG C  +R  D  +
Sbjct: 503 DVTGIGRNAIT------------------------------FNTLIDGLCNAERIDDAAE 532

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M    ++P+ +T+  ++     QG++S A  +   M   G   DV+TY+ +I+GL 
Sbjct: 533 LVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLC 592

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K +     L + + M   G+ P    YN ++  L +  N   AL LF ++T+ G  PD  
Sbjct: 593 KARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAF 652

Query: 595 TYNTIICGYC 604
           TY  +  G C
Sbjct: 653 TYKIVFRGLC 662



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 226/479 (47%), Gaps = 10/479 (2%)

Query: 136 AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRK 191
           A   D G+  S D+ + ++  L  + +      L   MR +G  V     +  +    R 
Sbjct: 79  ALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARL 138

Query: 192 GVIENAFHM-HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
            + ++AF +   Q+   G   N    N +L  L    +I    S +  +   G +P+VVT
Sbjct: 139 QLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVT 198

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           F+T+I+A C+  +   A  +   M   D+ PD   ++ L++G  + G ++    L     
Sbjct: 199 FNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMS 258

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
           + G     V  + +++ Y  +G VG A+    + +  GF P+ +++S  + GLCQ G + 
Sbjct: 259 EMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVD 318

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
            A  + G +L    EP + TYS++I+  C +G+L +   + + M+  G  PD    + LI
Sbjct: 319 HALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLI 378

Query: 431 NGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
             L     + +AL    +     L PN++ FN L++  C++      V+LF  M      
Sbjct: 379 VALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCT 438

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PD +T+ +LI  + S G L+ A+ L  +M   G     +TY+ II GL K + I     +
Sbjct: 439 PDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEV 498

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           F  M+  G+  +   +N L++ L     +D A +L  Q+   GL+P+ +TYN+I+  YC
Sbjct: 499 FDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYC 557



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 145/357 (40%), Gaps = 33/357 (9%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMD--LVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           L+ A  ++A  E A ++ N  +  D  L P   +Y  +I  L  AG       L+     
Sbjct: 59  LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRR 118

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-GFLPNVISYSILIKGLCQQGRLV 370
            G ++ + +  S + +Y  +     A       L+  G   N   Y+ L+  L +  ++ 
Sbjct: 119 EGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIK 178

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
                + ++  + +EP ++T++++ID  C++ + R    + + M    + PD        
Sbjct: 179 LLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETT----- 233

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
                                    F TLM+G          ++L   M      P  +T
Sbjct: 234 -------------------------FTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVT 268

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
             VLI G    G +  A+    Q +  G  PD +T+S  ++GL +  ++   L +  LM 
Sbjct: 269 VNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLML 328

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           + G  PD+  Y+ ++N L     L+ A  +  Q+ D G  PD  T+NT+I   C+ N
Sbjct: 329 QEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN 385



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 11/285 (3%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G  +   RLF + +   GC      Y+ LI+N    GK+ +++++   M   G   S 
Sbjct: 418 KVGDPHLAVRLFEE-MKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQST 476

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQ 203
                ++  L     + +  ++   M     G+    +  L++GL     I++A  +  Q
Sbjct: 477 VTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQ 536

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +I  G  PN VT N IL   C  G I  A+ +   +   G + +VVT++TLIN  CK  +
Sbjct: 537 MISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARR 596

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
            + A +L   M    + P    Y+ +I  LF+    ++   L     + G   D   +  
Sbjct: 597 TQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKI 656

Query: 324 VMDAYV-GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
           V      G G +  A      M + GF+P   S+ +L +GL   G
Sbjct: 657 VFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLG 701


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 222/442 (50%), Gaps = 40/442 (9%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++I+ G +P++  CN+IL+ L     +  A +++ ++   G KP VVT++T+++++CKE 
Sbjct: 170 KMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEG 229

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           ++++A +L + M E    P+ + Y++L++GL K G L++   L+   L+ GL +    ++
Sbjct: 230 RVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYN 289

Query: 323 SVMDAYVGIGDVGRA---------------VQTYDR--------------------MLNG 347
            +++ +   G    A               + TY+                     ML  
Sbjct: 290 PLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKS 349

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
            F P+++S++ L+ G C+ G + EA  LF ++  R L P+++TY++LI G C  G L   
Sbjct: 350 KFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAA 409

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L   M  +GL PD    ++L+N     G +  A  FF + +   L P+ F +NT + G
Sbjct: 410 LRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             ++   +    +   M      PDVIT+ V +  +  QG+   A  L   M+  GL PD
Sbjct: 470 EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPD 529

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +TY++II+G  K  ++     +F  M   GVAP +  Y VL++    +  LD A   F 
Sbjct: 530 HVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFS 589

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
           ++ ++ +  ++ITYN II G C
Sbjct: 590 KMLEKSVPANVITYNAIINGLC 611



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 223/469 (47%), Gaps = 44/469 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++++Y + G++D+++E+ + M + G Y +      L++ L     + Q   L   M 
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 277

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQR----------------------- 207
             G  V    Y  L+NG  +KG+   AF +  +++ R                       
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 337

Query: 208 ------------GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
                        F P+IV+ N +L   C  G I  A  LFD L      P V+T++TLI
Sbjct: 338 GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLI 397

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +  C    L+ A +L   M +  L PD+  Y+IL++G FK G +          L +GLK
Sbjct: 398 HGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK 457

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D   +++ +   + I D   A    + ML  GF P+VI+Y++ +  LCQQG   EAC L
Sbjct: 458 PDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 517

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--- 432
              ++   L P  +TY+S+I+GF K+G LR    +++ M+ +G+ P  V  ++LI+    
Sbjct: 518 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 577

Query: 433 --LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
             ++  A  +F + +  ++  N+  +N +++G C  +R  +  K F  M    I P+  +
Sbjct: 578 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 637

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
           +T+LI    + G    A+ L+ +ML R + PD  T+S  +  L +   +
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQV 686



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 7/299 (2%)

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G+K  VV +++++D+Y   G V +A++    M   G  PN ++Y++L+ GL ++G L +A
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA 269

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            GL  ++L   L  S  TY+ LI+GFC+ G   + F L + M+ R   P     + L+ G
Sbjct: 270 KGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYG 329

Query: 433 L------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           L       G  LRF    ++    P++  FN+L+ G CR    ++   LF  +   ++ P
Sbjct: 330 LCKWVQVTGVRLRFS-DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
            VIT+  LI G+   G L +A+ L  +M  +GL PD+ TY+ +++G FK   +S+    F
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             M   G+ PD   YN  +   +K  +   A  +  ++   G  PD+ITYN  +   C 
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQ 507



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 57/95 (60%)

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           +L+F +M++ GL PDV   + I+  L     +S   +++ +ME+ G+ P +  YN +L+ 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             KE  +D AL+L  ++ +RG  P+ +TYN ++ G
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNG 259



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L +F  M RNG+ PD+   N +L +L  E  L  A  ++G +   G++P ++TYNT++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 603 YC 604
           YC
Sbjct: 225 YC 226


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 229/456 (50%), Gaps = 12/456 (2%)

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           L R +R  G        N +L +  ++ A  + +++  +    N+ + N +LK LC  G+
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRLPLDEAIELFQELPHK----NVCSYNILLKALCDAGR 274

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  LFD +      P+VVT+  LI+  C   +LE A +L + M+   + P+  +Y+ 
Sbjct: 275 VKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTS 331

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++  L   G + +   ++   + R + LD  ++++V+  +   GD+  A + +D M   G
Sbjct: 332 VVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKG 391

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              + ++Y+ +I GLC+   L EA  L  ++  RRL+   +TY+ LIDG+CK GK+ + F
Sbjct: 392 LATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAF 451

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +++ M++RG+ P+ V  + L +GL   GD   A     +     L  N   +N+L++G 
Sbjct: 452 QMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGL 511

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+       ++    M    +KPDV T+T LI  +   G L  A  L  +ML +G+ P +
Sbjct: 512 CKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTI 571

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY+ +++G      +  G  +   M    + P+ A YN L+     E N+ +  +++  
Sbjct: 572 VTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKG 631

Query: 584 LTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           +  R + P+  TYN +I G+C   +     YF  ++
Sbjct: 632 MRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEM 667



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 229/485 (47%), Gaps = 16/485 (3%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLC 170
           C Y+ L++     G++ ++ ++F  M+      +PD+V    L+        +    KL 
Sbjct: 260 CSYNILLKALCDAGRVKDARQLFDEMAS-----APDVVTYGILIHGHCALGELENAVKLL 314

Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M   G      VY  ++  L  KG I +A  +   ++QR  + +      +L   C  
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G + +A   FD +   G   + VT++T+IN  C+  +LE+A +L   M    L  D + Y
Sbjct: 375 GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++LIDG  K G++ E  ++    + RG+  +VV ++++ D     GDV  A +    M N
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G   N  +Y+ LI GLC+ G L +A      +    L+P + TY++LID  CKSG L  
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDR 554

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
             SL   M+ +G+KP  V  ++L+NG      +    +     +   + PN   +N+LM 
Sbjct: 555 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMK 614

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C       T +++  M   ++ P+  T+ +LI+G     ++  A+    +M+++G   
Sbjct: 615 QYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRL 674

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
              +YSA+I  L K K       +F  M + G+  +  +Y+  +++   E NL++ L L 
Sbjct: 675 TATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALC 734

Query: 582 GQLTD 586
            +L +
Sbjct: 735 DELVE 739


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 262/508 (51%), Gaps = 13/508 (2%)

Query: 95  GKTYNFFRLFRDSLGDFG-CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
           GK  +F RL   S      C+Y  ++ N +   + +E++++F++M +     S     RL
Sbjct: 18  GKALSFSRLLGLSFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRL 77

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           ++ +           LC+ ++  G          LMN   +      A     ++++ GF
Sbjct: 78  LNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGF 137

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P+I T   ++   C+  +I  A S+ + ++ +G KP+VV ++T+I++ CK   ++ A  
Sbjct: 138 EPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALS 197

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L+N M    + PD+++Y+ L++GL  +GR ++ + LL   + R +K DV+ F++++DA+V
Sbjct: 198 LFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFV 257

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G +  A + Y+ M+     PN+ +Y+ LI GLC +GRL EA  +F  +  +   P ++
Sbjct: 258 KEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVV 317

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN--GLMGD---ALRFFFQS 444
            Y+SLI+GFCK  K+ D   ++  M ++GL  + +  + LI   GL+G    A   F   
Sbjct: 318 AYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHM 377

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI---KPDVITHTVLIRGIASQ 501
           V   + PN+  +N L+   C   +    + +F  M    I    P++ T+ VL+ G+   
Sbjct: 378 VSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYN 437

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G L  A+++F  M KR +   +ITY+ II G+ K   +   L++F  +   GV P++  Y
Sbjct: 438 GKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTY 497

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGL 589
             +++ L +E  +  A  LF ++ + G+
Sbjct: 498 TTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 241/471 (51%), Gaps = 45/471 (9%)

Query: 176 KGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           + FC Y E L NGL      E A  +   +++   +P+I+   ++L  +    +     +
Sbjct: 34  RAFCNYREILRNGLHSLQFNE-ALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVIN 92

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   L ++G   ++ T + L+N FC+ ++   A      +M++   PD+  ++ LI+G  
Sbjct: 93  LCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFC 152

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
              R++E   ++   ++ G+K DVV++++++D+    G V  A+  +++M N G  P+V+
Sbjct: 153 LGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVV 212

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ L+ GLC  GR  +A  L   ++ R+++P ++T+++LID F K GKL D   LY+ M
Sbjct: 213 MYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEM 272

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           I+  + P+    + LINGL     + +A + F+        P++  + +L++G C+ K+ 
Sbjct: 273 IQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 332

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            D +K+F  M    +  + IT+T LI+G    G  + A  +F  M+ RG+ P++ TY+ +
Sbjct: 333 EDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVL 392

Query: 530 IHGLFKGKNISVGLHMFKLMER---NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           +H L     ++  L +F+ M++   +GV P+I  YNVLL+ L     L+ AL +FG +  
Sbjct: 393 LHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQK 452

Query: 587 R-----------------------------------GLEPDIITYNTIICG 602
           R                                   G++P+++TY T+I G
Sbjct: 453 RDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISG 503



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 200/385 (51%), Gaps = 8/385 (2%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           Q   A  LF  ++   P P+++ F+ L+N   K  K +    L   +  M +  DL   +
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           +L++   ++ +    +  L   +  G + D+  F+S+++ +     +  A+   ++M+  
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V+ Y+ +I  LC+ G +  A  LF Q+    + P ++ Y+SL++G C SG+ RD 
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L   M+KR +KPD +  + LI+     G + DA   + + ++M++ PN+F + +L++G
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C   R  +  ++F LM      PDV+ +T LI G      +  A+ +F++M ++GLT +
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            ITY+ +I G       +V   +F  M   GV P+I  YNVLL+ L     ++ AL +F 
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFE 410

Query: 583 QLTDR---GLEPDIITYNTIICGYC 604
            +  R   G+ P+I TYN ++ G C
Sbjct: 411 DMQKREIDGVPPNIRTYNVLLHGLC 435



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 427 SLLINGL----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            +L NGL      +AL  F   V    +P++  F  L++   ++K+    + L   + + 
Sbjct: 41  EILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIM 100

Query: 483 NIKPDVITHTVLIRGI--ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
            +  D+ T  +L+     +SQ  L+S+ L   +++K G  PD+ T++++I+G   G  I 
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFL--GKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             + M   M   G+ PD+ IY  +++ L K  ++D AL LF Q+ + G+ PD++ Y +++
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 601 CGYCS 605
            G C+
Sbjct: 219 NGLCN 223


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 206/389 (52%), Gaps = 10/389 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+NG+ + G    A  + +++  R   PN+V  + I+  LC    +  A  LF  + 
Sbjct: 167 YGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMT 226

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           + G   +VVT+STLI  FC E KL++A  L N M+   + P++  Y+IL+D L K G++K
Sbjct: 227 VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   +L   L   +K DV+ +S++MD Y  + +V +A   ++ M   G  P+V +Y+ILI
Sbjct: 287 EAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+   + EA  LF ++  + + P ++TYSSLIDG CKSG++   + L D M  RG  
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQP 406

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            + +  S LI+GL     +  A+  F +     + PN F F  L+DG C+  R  D  ++
Sbjct: 407 ANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEV 466

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  +       +V T+ V+I G   QG L  A+ +  +M   G  PD +T+  II  LFK
Sbjct: 467 FQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526

Query: 536 ----GKNISVGLHMFKLME-RNGVAPDIA 559
               G N+     +++++E + G  P I 
Sbjct: 527 KDENGGNVGFDKKVWEIVEHKKGETPSIT 555



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 213/403 (52%), Gaps = 5/403 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G  P+++T N ++   C  GQI    S+   +L  G  P+ VT +TLI   C + +++K
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A   ++ ++      + + Y  LI+G+ K G  +   +LL     R  K +VV++S+++D
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIID 207

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A      V  A   +  M   G   +V++YS LI G C +G+L EA GL  +++++ + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           ++ TY+ L+D  CK GK+++  S+   M+K  +KPD +  S L++G      +  A   F
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
                M + P++  +  L++G C+ K   + + LF  M   N+ P ++T++ LI G+   
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +     L  +M  RG   +VITYS++I GL K  ++   + +F  M+  G+ P+   +
Sbjct: 388 GRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTF 447

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +LL+ L K   L  A ++F  L  +G   ++ TYN +I G+C
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHC 490



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 250/489 (51%), Gaps = 17/489 (3%)

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK----LCRAMRGKG--- 177
           I  +D++V  F  M  + +  +P ++Q   + ++DS +  ++Y     L   +  KG   
Sbjct: 37  IQNVDDAVSQFNRM--LCMRHTPPIIQ--FNKILDSFAKMKHYSTAVSLSHRLELKGIQP 92

Query: 178 -FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
                  L+N     G I   F +  ++++RG+ P+ VT N ++K LC+ GQ+  A    
Sbjct: 93  DLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFH 152

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           D LL  G + N V++ TLIN  CK      A +L   +      P++++YS +ID L K 
Sbjct: 153 DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKY 212

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
             + E   L      +G+  DVV +S+++  +   G +  A+   + M+     PNV +Y
Sbjct: 213 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           +IL+  LC++G++ EA  +   +L   ++P ++TYS+L+DG+    +++    +++ M  
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 417 RGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G+ PD    ++LING     ++ +AL  F +  +  ++P +  +++L+DG C+  R   
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPY 392

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              L   M       +VIT++ LI G+   G L  AI LF +M  +G+ P+  T++ ++ 
Sbjct: 393 VWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLD 452

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL KG  +     +F+ +   G   ++  YNV+++   K+  L+ AL +  ++ D G  P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIP 512

Query: 592 DIITYNTII 600
           D +T+  II
Sbjct: 513 DAVTFEIII 521



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 205/400 (51%), Gaps = 5/400 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P I+  NKIL           A SL   L L G +P+++T + LIN FC   ++   F 
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +   +++    PD +  + LI GL   G++K+        L +G +L+ V + ++++   
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVC 175

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            IGD   A++   ++      PNV+ YS +I  LC+   + EA GLF ++ ++ +   ++
Sbjct: 176 KIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL 449
           TYS+LI GFC  GKL++   L + M+ + + P+    ++L++ L  +      +SV   +
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295

Query: 450 I-----PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           +     P++  ++TLMDG   +        +F  M +  + PDV T+T+LI G      +
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ LF +M ++ + P ++TYS++I GL K   I     +   M   G   ++  Y+ L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSL 415

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           ++ L K  +LD A+ LF ++ D+G+ P+  T+  ++ G C
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLC 455



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 122/229 (53%), Gaps = 2/229 (0%)

Query: 207  RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            +G  P++ T N ++   C  GQI    S+   +L  G  P+ +TF+TLIN  C + ++ K
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 267  AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
            A   ++ ++      + + Y  LI+G+ K G  +   +LL     R  K DVV++++++D
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 327  AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            A      V +A   +  M   G   +V++Y+ LI G C  G+L EA GL  +++++ + P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 387  SLLTYSSLIDGFCKSGK--LRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            ++ TY+ L+D  CK GK  L +  S+   M   G K +AV   ++I+ L
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 131/260 (50%), Gaps = 7/260 (2%)

Query: 337  AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
            AV    R+   G  P++ + +ILI   C  G++     +  ++L R   P  +T+++LI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 397  GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIP 451
            G C  G++      +D ++ +G + + V    LING+  +GD   A++   +       P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 452  NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
            ++ ++NT++D  C+ +  +    LF  M +  I  DV+T+  LI G    G L  AI L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 512  FQMLKRGLTPDVITYSAIIHGLFK-GKNI-SVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
             +M+ + + P+V TY+ ++  L K GK++    L M   ME NG   +   + ++++ L 
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 570  KECNLDAALKLFGQLTDRGL 589
            ++   D   KL  ++  RGL
Sbjct: 1185 EKDENDKVEKLLHEMIARGL 1204



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 7/236 (2%)

Query: 372  ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
            A  L  ++ ++ ++P L T + LI+ FC  G++   FS+   ++KRG  PD +  + LIN
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 432  GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
            GL     +  AL F  + +      N   + TL++G C++      +KL   +     KP
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 487  DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
            DV+ +  +I  +     +S A  LFF+M  +G++ DV+TY+ +I+G      +   + + 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 547  KLMERNGVAPDIAIYNVLLNMLIKECN--LDAALKLFGQLTDRGLEPDIITYNTII 600
              M    + P++  YN+L++ L KE    LD +L +  ++ D G + + +T+  II
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIII 1180



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 134/268 (50%), Gaps = 9/268 (3%)

Query: 232  ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
            A SL   L L G +P++ T + LIN FC   ++   F +   +++    PD I ++ LI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 292  GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            GL   G++ +        L +G +L+ V + ++++    IGD   A++   ++      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 352  NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
            +V+ Y+ +I  LC+   + +A GLF ++ ++ +   ++TY++LI GFC  GKL++   L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 412  DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            + M+ + + P+    ++L++ L  +      +S+ M         + + D  C+    T 
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSM--------LSKMEDNGCKANAVTF 1176

Query: 472  TVKLFMLMGM-YNIKPDVITHTVLIRGI 498
             + +  L     N K + + H ++ RG+
Sbjct: 1177 EIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 82/154 (53%)

Query: 451  PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
            P+LF  N L++  C + + T    +   +      PD IT T LI G+  +G ++ A+  
Sbjct: 959  PDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHF 1018

Query: 511  FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
              ++L +G   + ++Y  +I+G+ K  +    + + + ++     PD+ +YN +++ L K
Sbjct: 1019 HDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCK 1078

Query: 571  ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
               +  A  LF ++  +G+  D++TYNT+I G+C
Sbjct: 1079 HQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFC 1112



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 6/218 (2%)

Query: 116  SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
            + LI  +  +G+I  +  I A +   G +        L++ L     V +       +  
Sbjct: 965  NILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLA 1024

Query: 176  KGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            +GF +    Y  L+NG+ + G    A  + R++  R   P++V  N I+  LC +  +  
Sbjct: 1025 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSK 1084

Query: 232  ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
            A  LF  + + G   +VVT++TLI  FC   KL++A  L N M+   + P++  Y+IL+D
Sbjct: 1085 AYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVD 1144

Query: 292  GLFKAGR--LKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L K G+  L E   +L    D G K + V F  ++ A
Sbjct: 1145 ALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISA 1182



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 70/139 (50%)

Query: 466  LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            +K  +  V L   + +  I+PD+ T  +LI      G ++    +  ++LKRG  PD IT
Sbjct: 939  MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998

Query: 526  YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            ++ +I+GL     ++  LH    +   G   +   Y  L+N + K  +  AA+KL  ++ 
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 586  DRGLEPDIITYNTIICGYC 604
             R  +PD++ YNTII   C
Sbjct: 1059 GRLTKPDVVMYNTIIDALC 1077



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 54/115 (46%)

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           +H+       S  ++  A+  F +ML    TP +I ++ I+    K K+ S  + +   +
Sbjct: 26  SHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL 85

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           E  G+ PD+   N+L+N       +     +  ++  RG  PD +T NT+I G C
Sbjct: 86  ELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLC 140



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 63/141 (44%)

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           ++   D V  F  M      P +I    ++   A     S+A+ L  ++  +G+ PD+IT
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            + +I+       I+ G  +   + + G  PD    N L+  L  +  +  AL    +L 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 586 DRGLEPDIITYNTIICGYCSL 606
            +G + + ++Y T+I G C +
Sbjct: 157 AQGFQLNQVSYGTLINGVCKI 177



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 11/122 (9%)

Query: 496  RGIASQGSL-----------SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            RG+ S G+            S+A+ L  ++  +G+ PD+ T + +I+       I+    
Sbjct: 923  RGVTSVGAYIRIPHNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFS 982

Query: 545  MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +   + + G  PD   +  L+N L  +  ++ AL    +L  +G + + ++Y T+I G C
Sbjct: 983  ILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVC 1042

Query: 605  SL 606
             +
Sbjct: 1043 KI 1044


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 246/500 (49%), Gaps = 13/500 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  +V +   ++++  +     +G+ L   +   L+  LV+ N +     L   M+
Sbjct: 146 YATVIRVFVELSMFEDALVTYVEAKKVGVELQ--VCNFLLKGLVEGNQIMYVRSLFDDMK 203

Query: 175 GKG----FCVYEFLMNGLLR--KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
             G       Y  LM+      K  +E A  +  ++   G  PN  T    L  LC   Q
Sbjct: 204 ISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQ 263

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A +   +L   G   N   F+ +I+ FC + ++ KA ++++ M +   VPD+  YSI
Sbjct: 264 VKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSI 323

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+DGL K G +  G  +L+     G+  ++V +SS++      G V  A + + R+ + G
Sbjct: 324 LVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQG 383

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F  + I YSI++ G CQ   L     L+  ++     P    YSSLI  +C+  +L++  
Sbjct: 384 FKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEAL 443

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +++ MI  G+ P+ V C++L++     GL+G+A  F  +  +  ++PNL  +  +++G 
Sbjct: 444 EVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGL 503

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C++ +  D   +F  M      PD + ++++I G      L  A  L+++M+  G  P++
Sbjct: 504 CKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNI 563

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+++I+GL     +   + +FK M   G+ PD  +Y  L+    K  N+ AAL++F +
Sbjct: 564 FTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFRE 623

Query: 584 LTDRGLEPDIITYNTIICGY 603
           +   GL  D   Y  +I G+
Sbjct: 624 METEGLSADSFVYTCLIGGF 643



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 205/413 (49%), Gaps = 12/413 (2%)

Query: 164 GQYYKLCRAMRGKGFC-------VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
           GQ +K      G   C        Y  L++GL ++G +   ++M  ++ + G  PN+V+ 
Sbjct: 297 GQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSY 356

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           + +L  LC  G++  A  LF  L   G K + + +S +++  C+   LE  + L+N M+ 
Sbjct: 357 SSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVH 416

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
            + VPD   YS LI    +  +LKE  E+    +  G+  +VV  + ++  +   G +G 
Sbjct: 417 HNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGE 476

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A    D++   G +PN+ +Y ++I GLC+  +  +  G+F  ++ R   P  + YS +ID
Sbjct: 477 AFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIID 536

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIP 451
           GF K+  L++ F LY  M+  G KP+    + LINGL  D      +  F   +   L P
Sbjct: 537 GFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTP 596

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +  ++ +L+   C+       +++F  M    +  D   +T LI G +   ++  A L  
Sbjct: 597 DRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFM 656

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
            +M+ +GLTP V+TY+ +I G FK  +    + M+  M + G+APD  +  +L
Sbjct: 657 EEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL 709



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 182/410 (44%), Gaps = 63/410 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS L+    R G+++ + E+F  + D G                                
Sbjct: 356 YSSLLHGLCRAGRVELAFELFKRLKDQGF------------------------------- 384

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                VY  +++G  +   +E  + +   ++   FVP+    + ++   C + Q+  A  
Sbjct: 385 KHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALE 444

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F++++  G  PNVVT + L++ F  E  + +AF   + + +  +VP+L  Y ++I+GL 
Sbjct: 445 VFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLC 504

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  +  +   +    + RG   D V++S ++D +V   D+  A + Y +M++ G  PN+ 
Sbjct: 505 KVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIF 564

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI GLC   +L E   LF  ++   L P  + Y+SLI  +CK   ++    ++  M
Sbjct: 565 TYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREM 624

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
              GL  D+ V + LI G                       F+ ++        A D  +
Sbjct: 625 ETEGLSADSFVYTCLIGG-----------------------FSKVL--------AMDGAQ 653

Query: 475 LFMLMGM-YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           LFM   M   + P V+T+T LI G    G    A++++  ML+ G+ PD 
Sbjct: 654 LFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDA 703



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 169/365 (46%), Gaps = 11/365 (3%)

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           ++T+I  F + +  E A   Y    ++ +  +L + + L+ GL +  ++     L     
Sbjct: 146 YATVIRVFVELSMFEDALVTYVEAKKVGV--ELQVCNFLLKGLVEGNQIMYVRSLFDDMK 203

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDV--GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
             G   ++  +S +M  Y     +    A +    M   G  PN  +Y   + GLC+  +
Sbjct: 204 ISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCR-AK 262

Query: 369 LVEACGLFGQVLIRRLEP-SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
            V++   F Q+L +R  P +   ++++I GFC  G++     ++D M K G  PD    S
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYS 322

Query: 428 LLINGL--MGDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +L++GL   GD L  ++  V M    + PNL  +++L+ G CR  R     +LF  +   
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQ 382

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
             K D I +++++ G      L     L+  M+     PD   YS++I+   + + +   
Sbjct: 383 GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEA 442

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L +F+LM  +G+ P++    +L++    E  +  A     ++   G+ P++ TY  II G
Sbjct: 443 LEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIING 502

Query: 603 YCSLN 607
            C +N
Sbjct: 503 LCKVN 507



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 139/292 (47%), Gaps = 9/292 (3%)

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           V+++V+  +V +     A+ TY      G    V ++  L+KGL +  +++    LF  +
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKVGVELQVCNF--LLKGLVEGNQIMYVRSLFDDM 202

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKL--RDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
            I    P++ +YS L+  +    KL   +   L   M   G++P+A      + GL    
Sbjct: 203 KISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAK 262

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            +  A  F     +     N + FN ++ G C   +    V++F  M      PDV +++
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYS 322

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           +L+ G+  QG + +   +  +M + G+TP++++YS+++HGL +   + +   +FK ++  
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQ 382

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           G   D  +Y+++L+   +  +L+    L+  +      PD   Y+++I  YC
Sbjct: 383 GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYC 434



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/183 (20%), Positives = 86/183 (46%), Gaps = 7/183 (3%)

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           DAL  + ++ ++ +   L + N L+ G     +      LF  M +    P++ +++VL+
Sbjct: 161 DALVTYVEAKKVGV--ELQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLM 218

Query: 496 RGIASQGS---LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
             + + G+   L  A  L  +M   G+ P+  TY   ++GL + K +    +  +++ + 
Sbjct: 219 -SMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQR 277

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
           G   +   +N +++    +  +  A+++F  +   G  PD+ +Y+ ++ G C     L  
Sbjct: 278 GYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLT- 336

Query: 613 GYF 615
           GY+
Sbjct: 337 GYY 339


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 229/427 (53%), Gaps = 6/427 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+N   + G +  AF +   +++ GF  ++     ++K LC+ G++  A SL    
Sbjct: 107 TFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEY 166

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G + + V + T+IN  CK  K   A Q++  M ++ + P+LI+Y+ +IDGL K G +
Sbjct: 167 VDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLV 226

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM-LNGGFLPNVISYSI 358
            E   L    ++ G++LDV  ++S++  +  +G    AV+  D M + G   P+V +++I
Sbjct: 227 DEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNI 286

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI GLC+ GR+ EA  +   ++ R  +P +++Y++L++G+C SG + +   ++D M++R 
Sbjct: 287 LIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERT 346

Query: 419 LKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             P+ +    LING     ++ +A+    +     L+P+   +N L+DG  +  R+    
Sbjct: 347 ALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEW 406

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M       D+IT+ VL+           A+ LF  +++ G++P++ TY+ ++ GL
Sbjct: 407 DLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGL 466

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K   +     +F+L+   G  P+I  YN++++ L KE  LD A  L  ++ +    P+ 
Sbjct: 467 CKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNY 526

Query: 594 ITYNTII 600
           IT++TI+
Sbjct: 527 ITFDTIV 533



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 209/401 (52%), Gaps = 41/401 (10%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           KP+++TFS LINAF +  ++  AF L   +++M    D+ I + L+ GL   GR+ E   
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           LL   +DRG + D V + ++++    IG    A+Q + +M      PN+I Y+ +I GLC
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221

Query: 365 QQGRLVEACG-----------------------------------LFGQVLIR-RLEPSL 388
           +QG + EACG                                   L  ++++R ++ P +
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
            T++ LIDG CK G++ + +++   MIKRG KPD V  + L+NG      +G+A + F +
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            V  T +PN+  + TL++G C+++   + + L   M   N+ PD +T+  L+ G++  G 
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
                 L   M   G   D+ITY+ ++   FK +     L +F+ +   G++P+I  YN+
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           LL+ L K   L  A ++F  L+ +G +P+I TYN +I G C
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLC 502



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 216/429 (50%), Gaps = 10/429 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S LI  + ++G++  +  +   +  MG  +   ++  LM  L     V +   L     
Sbjct: 108 FSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYV 167

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y  ++NGL + G   +A  M  ++ +    PN++  N ++  LC  G + 
Sbjct: 168 DRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVD 227

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV-PDLIIYSIL 289
            A  L   ++  G + +V +++++I+ FC   + + A +L + M+    V PD+  ++IL
Sbjct: 228 EACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNIL 287

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDGL K GR+ E   ++   + RG K D+V ++++M+ Y   G VG A Q +D+M+    
Sbjct: 288 IDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTA 347

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           LPNVISY  LI G C+   + EA  L  ++  + L P  +TY+ L+DG  KSG+    + 
Sbjct: 348 LPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWD 407

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L + M   G   D +  ++L++          AL  F   + + + PN+  +N L+DG C
Sbjct: 408 LVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLC 467

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  R     ++F L+     +P++ T+ ++I G+  +G L  A  L ++M+     P+ I
Sbjct: 468 KSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYI 527

Query: 525 TYSAIIHGL 533
           T+  I+  +
Sbjct: 528 TFDTIVRAI 536



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 175/328 (53%), Gaps = 11/328 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR--- 171
           Y+ +I+   + G +DE+  +   M + GI L    V    S +    SVG++    +   
Sbjct: 213 YNTVIDGLCKQGLVDEACGLCTEMVENGIELD---VYSYNSMIHGFCSVGRFQAAVKLLD 269

Query: 172 --AMRGKGFC-VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
              +RGK +  VY F  L++GL + G +  A+++   +I+RG+ P+IV+ N ++   C++
Sbjct: 270 EMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLS 329

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +G A  +FD ++     PNV+++ TLIN +CK   +++A  L   M   +LVPD + Y
Sbjct: 330 GSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTY 389

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + L+DGL K+GR     +L+      G   D++ ++ ++D Y       +A+  +  ++ 
Sbjct: 390 NCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIE 449

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PN+ +Y+IL+ GLC+ GRL  A  +F  +  +  +P++ TY+ +I G CK G L +
Sbjct: 450 IGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDE 509

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLM 434
             +L   M+     P+ +    ++  ++
Sbjct: 510 AEALLYKMVNNNYLPNYITFDTIVRAIL 537



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 140/262 (53%), Gaps = 6/262 (2%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++I++SILI    Q G++  A  L G +L    +  +   ++L+ G C  G++ +  SL
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL 162

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
               + RG + D V    +INGL       DA++ F +  ++ + PNL ++NT++DG C+
Sbjct: 163 LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCK 222

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG-LTPDVI 524
                +   L   M    I+ DV ++  +I G  S G   +A+ L  +M+ RG + PDV 
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           T++ +I GL K   +S   ++  +M + G  PDI  YN L+N      ++  A ++F ++
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
            +R   P++I+Y T+I GYC +
Sbjct: 343 VERTALPNVISYCTLINGYCKV 364



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 86/161 (53%)

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           + T+ P+L  F+ L++   +L +      L   +     + DV   T L++G+  +G + 
Sbjct: 98  KPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVL 157

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ L  + + RG   D + Y  II+GL K       + MF  M++  V P++ +YN ++
Sbjct: 158 EAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVI 217

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + L K+  +D A  L  ++ + G+E D+ +YN++I G+CS+
Sbjct: 218 DGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSV 258



 Score = 45.8 bits (107), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 38/153 (24%)

Query: 456 FNTLMDGCCRLKRATDTVKLF-MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           FN L+    +LKR    V L+ +L     IKP +IT ++LI   A  G +  A  L   +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 515 LKRGLTPDVITYSAIIHGL-FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           LK G   DV   + ++ GL  KG+ +                                  
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLE--------------------------------- 158

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              A+ L  +  DRG   D + Y TII G C +
Sbjct: 159 ---AVSLLHEYVDRGFRFDEVCYGTIINGLCKI 188



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 22/115 (19%), Positives = 61/115 (53%), Gaps = 4/115 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+++Y +  K D+++ +F ++ ++GI  +      L+  L  S  +    ++ + + 
Sbjct: 424 YNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLS 483

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
            KG       Y  +++GL ++G ++ A  +  +++   ++PN +T + I++ + +
Sbjct: 484 AKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAILV 538


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 228/491 (46%), Gaps = 34/491 (6%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI+   R  ++  +V +   MS  G+         LM   ++  S+    ++   M   G
Sbjct: 203 LIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG 262

Query: 178 FC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                     L+NG  + G +E+A    +Q I  GF P+ VT N  +  LC NG + +A 
Sbjct: 263 CSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHAL 322

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            + D++L  G  P+V T++T+IN   K  +L++A  + N M++   +PD   ++ LI  L
Sbjct: 323 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 382

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
               RL+E  +L      +GL  DV  F+ +++A   +GD    ++ ++ M + G  P+ 
Sbjct: 383 SSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDE 442

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ILI  LC  G+L  A  L  ++       S +TY+++ID  CK  ++ +   ++D 
Sbjct: 443 VTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQ 502

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           M  +G+   AV  + LI+GL                              C+ KR  D  
Sbjct: 503 MDAQGISRSAVTFNTLIDGL------------------------------CKAKRIDDAT 532

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +L   M    ++P+ IT+  ++     QG++  A  +   M   G   DV+TY  +I+GL
Sbjct: 533 ELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGL 592

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K     V L + + M   G+ P    YN ++  L +  NL  AL LF ++T+ G  PD 
Sbjct: 593 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDA 652

Query: 594 ITYNTIICGYC 604
           +TY  +    C
Sbjct: 653 LTYKIVFRSLC 663



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 209/430 (48%), Gaps = 5/430 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  L+N L+    ++    ++ ++  RG  P++VT N ++K LC   Q+  A  + + +
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 223

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+  TF+TL+  F +E  +E A ++   MME    P  +  ++LI+G  K GR+
Sbjct: 224 SSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRV 283

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++    +   +  G + D V +++ +      G V  A++  D ML  G  P+V +Y+ +
Sbjct: 284 EDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 343

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  L + G L EA G+  Q++ R   P   T+++LI       +L +   L   +  +GL
Sbjct: 344 INCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGL 403

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    ++LIN L  +GD    +R F +       P+   +N L+D  C + +  + + 
Sbjct: 404 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALD 463

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M         +T+  +I  +  +  +  A  +F QM  +G++   +T++ +I GL 
Sbjct: 464 LLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLC 523

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K I     + + M + G+ P+   YN +L    K+ N+  A  +   +T  G E D++
Sbjct: 524 KAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVV 583

Query: 595 TYNTIICGYC 604
           TY T+I G C
Sbjct: 584 TYGTLINGLC 593



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 202/428 (47%), Gaps = 18/428 (4%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR--LCINGQIGNASSLFDVLLL 241
           LM GL+R+  +    H  R V+ R FV +     +      L +N Q+ N +        
Sbjct: 107 LMEGLVRE--MRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLN-QLDNDT-------- 155

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G + + V F+ L+N   + +KL+    +YN M    + PD++  + LI  L +A +++ 
Sbjct: 156 FGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRT 215

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              +L      G+  D   F+++M  ++  G +  A++   +M+  G  P  ++ ++LI 
Sbjct: 216 AVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLIN 275

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C+ GR+ +A G   Q +    EP  +TY++ + G C++G +     + D M++ G  P
Sbjct: 276 GYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDP 335

Query: 422 D-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D      V+  L  NG + +A     Q V    +P+   FNTL+       R  + + L 
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLA 395

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             + +  + PDV T  +LI  +   G     I LF +M   G TPD +TY+ +I  L   
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSM 455

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +   L +   ME NG       YN +++ L K+  ++ A ++F Q+  +G+    +T+
Sbjct: 456 GKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTF 515

Query: 597 NTIICGYC 604
           NT+I G C
Sbjct: 516 NTLIDGLC 523



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 173/358 (48%), Gaps = 10/358 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    + G++DE+  I   M D G          L+  L   N + +   L R + 
Sbjct: 340 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELT 399

Query: 175 GKGFC--VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG    VY F  L+N L + G       +  ++   G  P+ VT N ++  LC  G++G
Sbjct: 400 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLG 459

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA  L + +   G   + VT++T+I+A CK+ ++E+A ++++ M    +    + ++ LI
Sbjct: 460 NALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLI 519

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL KA R+ +  EL+   +  GL+ + + ++S++  Y   G++ +A    + M   GF 
Sbjct: 520 DGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +V++Y  LI GLC+ GR   A  L   + I+ + P+   Y+ +I    +   LRD  +L
Sbjct: 580 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNL 639

Query: 411 YDNMIKRGLKPDAVVCSLLIN------GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           +  M + G  PDA+   ++        G + +A  F  + V    +P    F  L +G
Sbjct: 640 FREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEG 697



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 4/169 (2%)

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLM---GMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +  + ++   RL+R  D V L +       + ++ D +    L+  +     L     ++
Sbjct: 126 VVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVY 185

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M  RG+ PDV+T + +I  L +   +   + M + M  +GVAPD   +  L+   I+E
Sbjct: 186 NEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEE 245

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID-GYFKSQI 619
            +++AAL++  ++ + G  P  +T N +I GYC +       GY + +I
Sbjct: 246 GSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEI 294


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 243/490 (49%), Gaps = 30/490 (6%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSN----SVGQYYKLCR 171
           LI+ Y+++G  D+++E F  M D     +PD+     ++  L+  N    ++  Y ++ +
Sbjct: 132 LIKVYLKMGLTDKAMETFGSMRDFDC--TPDVYTYNMILDVLIQKNFLLLALTVYTRMMK 189

Query: 172 AMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
                    +  L++GL + G +++A H+  ++ QRG +P+  T   ++  LC + ++ +
Sbjct: 190 LNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDD 249

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  LFD +   G  P+ VT + L+N FC   ++++AF L  L  +   V D+  YS LI 
Sbjct: 250 AYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIR 309

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GLF+A R ++   L    ++  +K DV +++ +M      G V  A++  + M   G +P
Sbjct: 310 GLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVP 369

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE--PSLLTYSSLIDGFCKSGKLRDGFS 409
           + + Y++LIKG C  G L EA  L  Q+ I R +  P++ TYS LI G C++G  RD   
Sbjct: 370 DTVCYNVLIKGFCDMGLLSEARSL--QLEISRHDCFPNVKTYSILISGMCRNGLTRDAQE 427

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFI---------- 455
           +++ M K G  P AV  + LI+GL      +     F  + +   P+LF+          
Sbjct: 428 IFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVL 487

Query: 456 ----FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
                  +++  C         ++ M +      P + T+ +L+ G    G+ + A  LF
Sbjct: 488 DSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLF 547

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M  +GL+PD +TY  +I+GL + +       +F  ME+NG  PD A+Y  ++  + + 
Sbjct: 548 REMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRR 607

Query: 572 CNLDAALKLF 581
             L  A  L+
Sbjct: 608 MELPRAFSLW 617



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 175/361 (48%), Gaps = 40/361 (11%)

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            F  LI  + K    +KA + +  M + D  PD+  Y++++D L +       N LLL  
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQK------NFLLL-- 179

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
                                      A+  Y RM+    LPNV ++SILI GLC+ G +
Sbjct: 180 ---------------------------ALTVYTRMMKLNCLPNVATFSILIDGLCKSGNV 212

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  LF ++  R + P   TY  +I G C+S ++ D + L+D M   G+ PD V C+ L
Sbjct: 213 KDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNAL 272

Query: 430 INGL-MGDALRFFFQSVRM----TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           +NG  M D +   F  +R+      + ++  ++ L+ G  R KR  D   L+  M   N+
Sbjct: 273 LNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNV 332

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           KPDV  +T++++G+A  G +  A+ L  +M + G+ PD + Y+ +I G      +S    
Sbjct: 333 KPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARS 392

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +   + R+   P++  Y++L++ + +      A ++F ++   G  P  +T+N++I G C
Sbjct: 393 LQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLC 452

Query: 605 S 605
            
Sbjct: 453 K 453



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 143/580 (24%), Positives = 247/580 (42%), Gaps = 43/580 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           N IL  LI+ N    A+  +         PN+A    LI  L +S     A H+FD+M  
Sbjct: 165 NMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMT- 223

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           Q G   + F             Y  +I    R  ++D++  +F  M D G+   PD V  
Sbjct: 224 QRGILPDAF------------TYCVVISGLCRSKRVDDAYRLFDKMKDSGV--GPDFVTC 269

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L++     + V + + L R     G+ +    Y  L+ GL R    E+   ++R++I+
Sbjct: 270 NALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIE 329

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
               P++     ++K L   G++ +A  L + +   G  P+ V ++ LI  FC    L +
Sbjct: 330 DNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSE 389

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  L   +   D  P++  YSILI G+ + G  ++  E+       G     V F+S++D
Sbjct: 390 ARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLID 449

Query: 327 AYVGIG------------DVGRAVQTYDRMLNG-GFLPNVISYSILIKGLCQQGRLVEAC 373
                G            ++GR    + R+  G   + +  S   +++ LC  G + +A 
Sbjct: 450 GLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAY 509

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +  Q+      P + TY+ L++GFCK G     + L+  M  +GL PD V    LINGL
Sbjct: 510 RILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGL 569

Query: 434 M-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
           +      DA + F Q  +    P+  ++ T+M   CR         L+ L  + NI+   
Sbjct: 570 LRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLW-LKYLRNIRSQE 628

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
                 I G   +  +  A+    +M  +    D+  Y+  + GL + + +   L +F +
Sbjct: 629 DEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLI 688

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +E   V         L+  L+KE +LD A+ +F    ++G
Sbjct: 689 LEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKG 728



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 150/297 (50%), Gaps = 5/297 (1%)

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G+K+    F  ++  Y+ +G   +A++T+  M +    P+V +Y++++  L Q+  L+ A
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLA 180

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             ++ +++     P++ T+S LIDG CKSG ++D   L+D M +RG+ PDA    ++I+G
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           L     + DA R F +     + P+    N L++G C L R  +   L  L        D
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLD 300

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           V  ++ LIRG+          LL+ +M++  + PDV  Y+ ++ GL +   +   L +  
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLN 360

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            M  +GV PD   YNVL+        L  A  L  +++     P++ TY+ +I G C
Sbjct: 361 EMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMC 417



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 5/273 (1%)

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           QT + + NGG   +  ++ +LIK   + G   +A   FG +      P + TY+ ++D  
Sbjct: 112 QTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVL 171

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
            +   L    ++Y  M+K    P+    S+LI+GL     + DAL  F +  +  ++P+ 
Sbjct: 172 IQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDA 231

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
           F +  ++ G CR KR  D  +LF  M    + PD +T   L+ G      +  A  L   
Sbjct: 232 FTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRL 291

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
             K G   DV  YS +I GLF+ K       +++ M  + V PD+ +Y +++  L +   
Sbjct: 292 FEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGK 351

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +  AL+L  ++T+ G+ PD + YN +I G+C +
Sbjct: 352 VRDALELLNEMTESGVVPDTVCYNVLIKGFCDM 384



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 78/136 (57%)

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++ F  M  ++  PDV T+ +++  +  +  L  A+ ++ +M+K    P+V T+S +I 
Sbjct: 145 AMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILID 204

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL K  N+   LH+F  M + G+ PD   Y V+++ L +   +D A +LF ++ D G+ P
Sbjct: 205 GLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGP 264

Query: 592 DIITYNTIICGYCSLN 607
           D +T N ++ G+C L+
Sbjct: 265 DFVTCNALLNGFCMLD 280


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 245/500 (49%), Gaps = 12/500 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ Y +   +++++ ++  M+     L PD+V    +M+ L  S  V +   + R 
Sbjct: 90  YTTLIDAYCKSQCLEDALYMYDEMTVKS--LVPDVVTYTCIMNGLCKSGKVEEAKSVFRE 147

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  L++ L ++G +  AF +  +++ RG   ++V    ++  L   G 
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGM 207

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             NA  +F VLL     PN VT+S LI+  CK   + K   L   M E  + P++I+YS 
Sbjct: 208 ANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS 267

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++DG  K G L E  +++   + R +  +V V+ +++D Y      G A+  +  M + G
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N       +  L + GR+ EA  LF  ++ R L P  + Y+S++DGF K+GK  D F
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           ++   M ++    D V  ++LINGL      ++  F     ++ L P+   FNT+++  C
Sbjct: 388 NIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYC 447

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +     + +KL   M  Y +KP+ IT  +L++ + + G +   + L   ML  G  P   
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           T+ A++    K +   V LH    +   GV  D++ YN L++   +   +  A  +F  +
Sbjct: 508 THKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567

Query: 585 TDRGLEPDIITYNTIICGYC 604
             +G+  DIITYN +I GYC
Sbjct: 568 MGKGILADIITYNALIHGYC 587



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 242/498 (48%), Gaps = 41/498 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ LI+ Y R G+I  +VE+   M   G   +PD+V    LM+       +    KL   
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGP--APDIVTYNTLMNGFCKIGDLFTAKKLMGE 77

Query: 173 MR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +           Y  L++   +   +E+A +M+ ++  +  VP++VT   I+  LC +G+
Sbjct: 78  ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A S+F  +  VG  PN  +++TLI++  KE  + +AF L   M+   +  D+++Y+ 
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+DGLFKAG      ++    L+  L  + V +S+++D +  +GDV +       M    
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNVI YS ++ G  ++G L EA  +  +++ R + P++  Y +LIDG+ K+ +     
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L+  M  RGL+                               N F+ ++ ++   R  R
Sbjct: 318 DLFKEMKSRGLE------------------------------ENNFVIDSFVNNLKRSGR 347

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +  +LF  M    + PD + +T ++ G    G  S A  +  +M ++    DV+ Y+ 
Sbjct: 348 MEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNV 407

Query: 529 IIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           +I+GLFK GK  S   H    M + G+APD A +N ++N   KE NL  ALKL  ++   
Sbjct: 408 LINGLFKLGKYESESFHTG--MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465

Query: 588 GLEPDIITYNTIICGYCS 605
           GL+P+ IT N ++   C+
Sbjct: 466 GLKPNSITCNILVQRLCA 483



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 161/640 (25%), Positives = 278/640 (43%), Gaps = 109/640 (17%)

Query: 64  SPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE 120
            PN+     LI    +S   + A +++D+M ++             SL      Y+ ++ 
Sbjct: 84  EPNVITYTTLIDAYCKSQCLEDALYMYDEMTVK-------------SLVPDVVTYTCIMN 130

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM--RGKGF 178
              + GK++E+  +F  M ++G+  +      L+  L    +V + + L   M  RG GF
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190

Query: 179 --CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
              VY  LM+GL + G+  NA  M + +++   VPN VT + ++   C  G +     L 
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             +      PNV+ +S++++ + K+  L +A  +   M++ +++P++ +Y  LIDG FKA
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 297 -----------------------------------GRLKEGNELLLTALDRGLKLDVVVF 321
                                              GR++E +EL    + RGL  D V +
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +S+MD +   G    A      M       +V++Y++LI GL + G+  E+      +  
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQ 429

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---------- 431
             L P   T++++I+ +CK G L +   L + M   GLKP+++ C++L+           
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 432 --GLMGDALRFFF----------------------------QSVRMTLIPNLFIFNTLMD 461
              L+ D L   F                            Q V M +  +L  +NTL+ 
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIS 549

Query: 462 GCCRL---KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
             CRL   +RAT   K  M  G   I  D+IT+  LI G      L  A  +  QML  G
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKG---ILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           ++P+V TY+ ++ GL   + I     +   M+  G+ P+   Y++L++   K  N+   +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
           KL+ ++  +G  P   TYN +I       SC   G   SQ
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLI-------SCFAKGKKMSQ 699



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 199/378 (52%), Gaps = 16/378 (4%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           + +V  F+ LI+ +C+  ++ +A +L   M      PD++ Y+ L++G  K G L    +
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           L+       L+ +V+ +++++DAY     +  A+  YD M     +P+V++Y+ ++ GLC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + G++ EA  +F ++    + P+  +Y++LID   K G + + F L   M+ RG+  D V
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 425 VCSLLINGL----MGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           V + L++GL    M +     FQ +   +L+PN   ++ L+DG C+L        L   M
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              +I P+VI ++ ++ G   +G L+ A+ +  +M++R + P+V  Y  +I G FK    
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
            + L +FK M+  G+  +  + +  +N L +   ++ A +LF  +  RGL PD + Y + 
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS- 372

Query: 600 ICGYCSLNSCLIDGYFKS 617
                     ++DG+FK+
Sbjct: 373 ----------MMDGFFKA 380



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 171/312 (54%), Gaps = 22/312 (7%)

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++  V  F+ ++D Y   G++ RAV+  + M   G  P++++Y+ L+ G C+ G L  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L G++ +  LEP+++TY++LID +CKS  L D   +YD M  + L PD V  + ++NGL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP-- 486
                + +A   F +   + ++PN F + TL+D    L +  +  + F+L G   ++   
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDS---LFKEGNVAEAFVLQGRMVVRGIG 189

Query: 487 -DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
            DV+ +T L+ G+   G  ++A  +F  +L+  L P+ +TYSA+I G  K  +++ G  +
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            + ME   + P++ +Y+ +++   K+  L+ A+ +  ++  R + P++  Y T       
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGT------- 302

Query: 606 LNSCLIDGYFKS 617
               LIDGYFK+
Sbjct: 303 ----LIDGYFKA 310



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 127/551 (23%), Positives = 222/551 (40%), Gaps = 101/551 (18%)

Query: 65  PNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           PN+     LI    ++D R +A  +F +M  +  +  NF                  + N
Sbjct: 295 PNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFV-------------IDSFVNN 341

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGK--G 177
             R G+++E+ E+F  M   G  L PD V    +M     +      + + + M  K  G
Sbjct: 342 LKRSGRMEEADELFKDMMSRG--LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSG 399

Query: 178 FCV--YEFLMNGLLRKGVIE----------------------------------NAFHMH 201
           F V  Y  L+NGL + G  E                                  NA  + 
Sbjct: 400 FDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLL 459

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            ++   G  PN +TCN +++RLC  G+I     L + +L++G  P   T   +++A  K 
Sbjct: 460 NEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            + +     ++ ++ M +  DL  Y+ LI    + G ++    +    + +G+  D++ +
Sbjct: 520 RRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY 579

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++  Y     + +A   + +ML  G  PNV +Y+IL+ GL     + EA GL  Q+  
Sbjct: 580 NALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE 639

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           R L P+  TY  L+ G  K G +++   LY  MI +G                       
Sbjct: 640 RGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG----------------------- 676

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG---I 498
                   +P    +N L+    + K+ +   +L   M +  I P+  T+ +LI G   +
Sbjct: 677 -------FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKL 729

Query: 499 ASQGSL---------SSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKL 548
           + Q  L         + A  LF +M ++G  P   T + I   L K GK       + KL
Sbjct: 730 SKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789

Query: 549 MERNGVAPDIA 559
            ++  V   +A
Sbjct: 790 YKKKTVQELLA 800


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 227/445 (51%), Gaps = 13/445 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRG---KGFC-----VYEFLMNGLLRKGVIENAFHMHRQV 204
           L+  L D N   Q   L   M     +G C      Y  ++NGLLR+G ++ A+ +  ++
Sbjct: 173 LLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEM 232

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           + +G  PN +T N +L   C +G+   A  +F  +   G +P+VVT++TL+   CK  + 
Sbjct: 233 LDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRS 292

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
            +A ++++ M++    PD  IY  L+ G    G L + ++LL   +  G + D  +F+ +
Sbjct: 293 MEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNIL 352

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           + AY   G V  A+  + +M   G  PN+++Y  ++  LC+ G++ +A   F +++   L
Sbjct: 353 IGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGL 412

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALR 439
            P+ + + +LI G C   K      L   MI RG+ P+ +  + L+N     G++  A  
Sbjct: 413 TPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKN 472

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F   VR+ +  ++  + TL+DG C   +  +  KL   M +  +KP+ +T+  +I G  
Sbjct: 473 IFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYC 532

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G +  A  LF QM  +G+ P ++ YS I+HGLF+ + I+    ++  M + G+   I 
Sbjct: 533 KNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIG 592

Query: 560 IYNVLLNMLIKECNLDAALKLFGQL 584
            YN++L  L +    D AL++F  L
Sbjct: 593 TYNIILQGLCQNNCTDDALRMFHNL 617



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 224/442 (50%), Gaps = 10/442 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVI----QRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           Y  L+ GL  +   + A H+   ++    + G  P++V+   ++  L   GQ+  A  LF
Sbjct: 170 YNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLF 229

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           D +L  G  PN +T++ L++ +C   K ++A  ++  M    + PD++ Y+ L+  L K 
Sbjct: 230 DEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKN 289

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GR  E  ++  + + +G K D  ++ +++  Y   G + +  Q  D M+  G  P+   +
Sbjct: 290 GRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIF 349

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           +ILI    + G + EA   F ++  + L P+++TY +++D  C+ GK+ D  S +D +I 
Sbjct: 350 NILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLIS 409

Query: 417 RGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            GL P+ VV   LI+GL        A     + +   + PN   FNTL++  C+    T 
Sbjct: 410 EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTR 469

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              +F LM   +++ DVIT+T LI G    G +  A  L   M+  G+ P+ +TY+ II+
Sbjct: 470 AKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIIN 529

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G  K   I     +F+ M   GV P I IY+ +L+ L +   + AA +L+  +   G++ 
Sbjct: 530 GYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKL 589

Query: 592 DIITYNTIICGYCSLNSCLIDG 613
            I TYN I+ G C  N+C  D 
Sbjct: 590 PIGTYNIILQGLCQ-NNCTDDA 610



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 223/437 (51%), Gaps = 10/437 (2%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL-F 236
            C Y  ++    R G ++ AF    +VI+ G+    +T + +LK LC + +  +A  +  
Sbjct: 96  LCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIAL 155

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL----VPDLIIYSILIDG 292
             +  +G  PN  +++ L+   C E + ++A  L + MM  D      PD++ Y+ +I+G
Sbjct: 156 RRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVING 215

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L + G+L +   L    LD+G+  + + ++ ++  Y   G    A+  + +M   G  P+
Sbjct: 216 LLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPD 275

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V++Y+ L+  LC+ GR +EA  +F  ++ +  +P    Y +L+ G+   G L     L D
Sbjct: 276 VVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLD 335

Query: 413 NMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M++ G +PD  + ++LI     +G++ +A+  F +  +  L PN+  + T+MD  CR+ 
Sbjct: 336 VMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVG 395

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  D +  F  +    + P+ +    LI G+ +      A  L  +M+ RG+ P+ I ++
Sbjct: 396 KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFN 455

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +++ L K   ++   ++F LM R  V  D+  Y  L++    +  +D A KL   +   
Sbjct: 456 TLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD 515

Query: 588 GLEPDIITYNTIICGYC 604
           G++P+ +TYNTII GYC
Sbjct: 516 GVKPNEVTYNTIINGYC 532



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 240/515 (46%), Gaps = 32/515 (6%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGK----TYN------------------FFRLFRDS 107
           +I+ LL+    D A  +FD+M+ Q       TYN                  F ++ RD 
Sbjct: 212 VINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDG 271

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
           +      Y+ L+    + G+  E+ ++F  M   G      +   L+        + Q +
Sbjct: 272 VEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMH 331

Query: 168 KLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
           +L   M   G      ++  L+    + G+++ A     ++ Q+G  PNIVT   ++  L
Sbjct: 332 QLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDAL 391

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C  G++ +A S FD L+  G  PN V F TLI+  C   K +KA +L   M+   + P+ 
Sbjct: 392 CRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNT 451

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           I ++ L++ L K G +     +    +   ++ DV+ +++++D Y   G V  A +  + 
Sbjct: 452 IFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEG 511

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+  G  PN ++Y+ +I G C+ GR+ +AC LF Q+  + + P ++ YS+++ G  ++ +
Sbjct: 512 MVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRR 571

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           +     LY  MIK G+K      ++++ GL       DALR F     +        FN 
Sbjct: 572 IAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNI 631

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++D   +  R  +   LF  +    + P+V+T+ ++++ +  QG L     LF  + K G
Sbjct: 632 MIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNG 691

Query: 519 LTPDVITYSAIIHGL-FKGKNISVGLHMFKLMERN 552
            T D    +A++  L  KG+    G+++ K+ E N
Sbjct: 692 CTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENN 726



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 154/322 (47%), Gaps = 20/322 (6%)

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E   + L+  +R  + D+  +S V+      G +  A     R++  G+    I++S L
Sbjct: 78  RESPAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPL 137

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +KGLC   R  +A      + +RR+      P+  +Y+ L+ G C   + +    L   M
Sbjct: 138 LKGLCHDKRTSDAM----DIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTM 193

Query: 415 I----KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +    + G  PD V  + +INGL+ +     A   F + +   + PN   +N L+ G C 
Sbjct: 194 MADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCS 253

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +  + + +F  M    ++PDV+T+  L+  +   G    A  +F  M+K+G  PD   
Sbjct: 254 SGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSI 313

Query: 526 YSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           Y  ++HG +  +   V +H +  +M RNG  PD  I+N+L+    K   +D A+  F ++
Sbjct: 314 YGTLLHG-YATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKM 372

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
             +GL P+I+TY T++   C +
Sbjct: 373 RQQGLHPNIVTYGTVMDALCRV 394



 Score = 40.8 bits (94), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 124/315 (39%), Gaps = 55/315 (17%)

Query: 110 DFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           D  CD   Y+ LI+ Y   GK+DE+ ++   M   G+  +      +++    +  +   
Sbjct: 481 DVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDA 540

Query: 167 YKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
             L R M  KG      +Y  +++GL +   I  A  ++  +I+ G    I T N IL+ 
Sbjct: 541 CSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQG 600

Query: 223 LCIN-----------------------------------GQIGNASSLFDVLLLVGPKPN 247
           LC N                                   G+   A  LF  LL  G  PN
Sbjct: 601 LCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPN 660

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           VVT+  ++ +  ++  LE+   L+  + +     D  + + L+  L + G +++    L 
Sbjct: 661 VVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLS 720

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG---GFLPNVISYSILIKGLC 364
              +    L+    +S  ++ V +   G+    YD+ +N     + P   S ++  +   
Sbjct: 721 KIDENNFSLE----ASTAESLVFLVSSGK----YDQHINSIPEKYRPTAKSRAVFSQK-- 770

Query: 365 QQGRLVEACGLFGQV 379
           +   L +A G +G V
Sbjct: 771 KNPGLFDAAGSYGVV 785


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 144/567 (25%), Positives = 249/567 (43%), Gaps = 85/567 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  LI+ +     ++ +V++F      G+ LS      L+ CL ++N       L   M+
Sbjct: 182 FDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMK 241

Query: 175 GKG----FCVYEFLMN-----------------------------------------GLL 189
             G       Y  +MN                                         GL 
Sbjct: 242 STGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLC 301

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           R G +E+A    R +I    + N+   N I+  LC  G++  A  + + +   G  P+V 
Sbjct: 302 RVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVY 361

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI------------------------- 284
           T+S LI+ FCK+  +EK   L   M   ++ P L+                         
Sbjct: 362 TYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDL 421

Query: 285 ----------IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
                      YSILI G    G L   ++L+   +   L  D   F S++  +  +G  
Sbjct: 422 GAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLW 481

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A++ ++ ML GG LP++ + +++I   C++GR+ EA  L  ++  + + P+L TY+++
Sbjct: 482 VNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAV 541

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTL 449
           I+  CK  K      L+  M+KR + P  VV S LI+G         AL  + + +++ +
Sbjct: 542 INRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGV 601

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            P++  +  L++  C   R  +   LF  M    + PD I++T +I G    G +  A  
Sbjct: 602 TPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWA 661

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF +ML+RG  P V+TY++++ G  K   I +   +   M+R G+ PD+  YNVL+    
Sbjct: 662 LFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHR 721

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITY 596
           +  NLD AL++  ++ + G+ PD +TY
Sbjct: 722 RRGNLDKALEMLNEMKENGVLPDHMTY 748



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 226/478 (47%), Gaps = 46/478 (9%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
            +   V++ L+       ++ENA  +  Q  + G   +  +CN +LK L    +     S
Sbjct: 176 ARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRS 235

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCK----EAKLE--KAFQLYNLMMEMDLVPDLIIYSI 288
           LF+ +   GP PNV T++ ++N +CK    EA ++  +A ++   M      P ++ YS 
Sbjct: 236 LFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYST 295

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            I GL + G ++   + + + +     ++V  +++++      G++  A++  + M + G
Sbjct: 296 YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCG 355

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS--------------- 393
             P+V +YSILI G C+QG + +   L  ++    +EPSL++YSS               
Sbjct: 356 ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISL 415

Query: 394 --------------------LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
                               LI GFC  G L     L + M++  L PD      L++G 
Sbjct: 416 DIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGF 475

Query: 434 --MG---DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
             MG   +AL FF   +   ++P++   N ++D  CR  R  + + L   M    I P++
Sbjct: 476 CKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNL 535

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
            T+  +I  +  +     A+ LF  MLKR + P V+ YS +I G  K  N    L ++  
Sbjct: 536 FTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYAR 595

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           M + GV PD+  Y +L+N+L     +  A  LF ++T+ G+ PD I+Y ++I G+C +
Sbjct: 596 MLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRI 653



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 211/461 (45%), Gaps = 37/461 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    + G++DE++++   M   GI  SPD+                         
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGI--SPDVY------------------------ 361

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++G  ++G +E   ++  ++      P++V+ + +   LC       +  
Sbjct: 362 -----TYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLD 416

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  L   G K +   +S LI  FC +  L+ A +L   M+  +L PD   +  L+ G  
Sbjct: 417 IFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFC 476

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G      E     L+ G+   +   + ++DA+   G V  A+   + M   G  PN+ 
Sbjct: 477 KMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLF 536

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ +I  LC++ +   A  LF  +L R + PS++ YS+LIDGF K    +    LY  M
Sbjct: 537 TYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARM 596

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           +K G+ PD V  ++LIN L     M +A   F +     + P+   + +++ G CR+   
Sbjct: 597 LKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDM 656

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
                LF  M      P V+T+T L+ G      +  A +L  +M ++G+TPDV+TY+ +
Sbjct: 657 RKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVL 716

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           I    +  N+   L M   M+ NGV PD   Y ++L  L+K
Sbjct: 717 IAAHRRRGNLDKALEMLNEMKENGVLPDHMTY-MMLEWLLK 756


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 253/500 (50%), Gaps = 10/500 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++  I+++ R  +   ++ +   M   G  L+      +++   + N   + Y+L   M 
Sbjct: 149 FTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDML 208

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       +  L++ L +KG ++ +  +  +V+++G   N+ T N  ++ LC  G + 
Sbjct: 209 RIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLS 268

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+ D ++  G  P+VVT++TLI   CK + + +A +  + ++   L PD   Y+ LI
Sbjct: 269 GAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLI 328

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  K G L+   ++L  A+ +G   D   + S+++      ++ RA+  ++  L  G  
Sbjct: 329 DGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLK 388

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P VI Y++LIKGLCQ+G +++A  +  ++        + TY+ +I+G CK G + D  +L
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNL 448

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            ++ I +G  PD    + LI+G      M   ++   +     + P++  +N++++G  +
Sbjct: 449 MNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSK 508

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +  D ++ F  M      P+ IT+ +L   +   G ++ A+ L  ++L +G+TPD ++
Sbjct: 509 AVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVS 568

Query: 526 YSAIIHGLFKGKNISVGLHMFKLM-ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           ++ II G     ++     +F+ M E+  V+   A YN+++N   ++ +L    KLF ++
Sbjct: 569 FATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEM 628

Query: 585 TDRGLEPDIITYNTIICGYC 604
              G  PD  TY  +I G+C
Sbjct: 629 GAGGCAPDTYTYRVMIDGFC 648



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 238/498 (47%), Gaps = 15/498 (3%)

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
           F  ENY R+    E+ E+F  M  +GI+       +L+  L     V +  +L   +  K
Sbjct: 191 FYEENY-RV----EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKK 245

Query: 177 GFCVYEFLMN----GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G C   F  N    GL RKG++  A  M   VI+ G  P++VT N ++  LC N  +  A
Sbjct: 246 GMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEA 305

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
                 L+  G +P+  T++TLI+ +CK   L+ A ++    +    VPD   Y  LI+G
Sbjct: 306 EKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLING 365

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L +   +     L   AL +GLK  V++++ ++      G + +A+Q  + M   G   +
Sbjct: 366 LCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSD 425

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           + +Y+++I GLC+ G + +A  L    + +   P + T+++LIDG+CK  K+     + +
Sbjct: 426 IWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILN 485

Query: 413 NMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M   G+ PD +  + ++NGL       D +  F   V    +PN   +N L +  C+  
Sbjct: 486 KMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAG 545

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDVITY 526
           +  + + L   +    I PD ++   +I G A+ G L  A  LF +M ++  ++    TY
Sbjct: 546 KVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATY 605

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I+   +  ++ +G  +F  M   G APD   Y V+++      N D+  K   ++ +
Sbjct: 606 NIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIE 665

Query: 587 RGLEPDIITYNTIICGYC 604
           +G  P + T+  +I   C
Sbjct: 666 KGFIPSLTTFGRVINCLC 683



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 246/496 (49%), Gaps = 9/496 (1%)

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
           +++Y R GK+ E+V++F  M       S      +M+ LV+S    Q +K+   M+  G 
Sbjct: 83  MKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGI 142

Query: 179 C--VYEFLM--NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
              VY F +      R     +A  +   ++ +G   N V    ++           A  
Sbjct: 143 VPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYE 202

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF+ +L +G  P+V TF+ L++  CK+ +++++ +L N +++  +  +L  ++I I GL 
Sbjct: 203 LFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLC 262

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + G L     +L + +  GL  DVV +++++       +V  A +   +++NGG  P+  
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF 322

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI G C+ G L  A  +    + +   P   TY SLI+G C++ ++    +L++  
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAA 382

Query: 415 IKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + +GLKP  ++ ++LI GL  +     AL+   +        +++ +N +++G C++   
Sbjct: 383 LGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCV 442

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           +D   L          PDV T   LI G   Q  + + I +  +M   G+TPDVITY+++
Sbjct: 443 SDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSV 502

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           ++GL K       +  F+ M   G  P+   YN+L   L K   ++ AL L  ++ ++G+
Sbjct: 503 LNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGI 562

Query: 590 EPDIITYNTIICGYCS 605
            PD +++ TII G+ +
Sbjct: 563 TPDTVSFATIISGFAN 578



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 215/428 (50%), Gaps = 5/428 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY   M    RKG ++ A  +  ++      P++++ N I+  L  +G    A  +F  +
Sbjct: 78  VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             VG  P+V TF+  I +FC+  +   A +L N M+      + + Y  ++ G ++    
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  EL    L  G+  DV  F+ ++      G+V  + +  +++L  G   N+ +++I 
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIF 257

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+GLC++G L  A  +   V+   L P ++TY++LI G CK+  + +       ++  GL
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD    + LI+     G++ +A +    ++    +P+ F + +L++G C+       + 
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF       +KP VI + +LI+G+  +G +  A+ +  +M + G + D+ TY+ +I+GL 
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +S   ++       G  PD+  +N L++   K+  ++  +++  ++   G+ PD+I
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVI 497

Query: 595 TYNTIICG 602
           TYN+++ G
Sbjct: 498 TYNSVLNG 505



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 212/427 (49%), Gaps = 14/427 (3%)

Query: 145 LSPDLV--QRLMSCLVDSNSVGQYYKLCR-----AMRGKGFCVYEFLMNGLLRKGVIENA 197
           L+PD+V    L+  L  +++V +  K         +   GF  Y  L++G  + G+++NA
Sbjct: 282 LTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF-TYNTLIDGYCKMGMLQNA 340

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
             + +  I +GFVP+  T   ++  LC N +I  A +LF+  L  G KP V+ ++ LI  
Sbjct: 341 EKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKG 400

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
            C+E  + +A Q+ N M E     D+  Y+++I+GL K G + + N L+  A+ +G   D
Sbjct: 401 LCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPD 460

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           V  F++++D Y     +   +Q  ++M + G  P+VI+Y+ ++ GL +  +  +    F 
Sbjct: 461 VFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFE 520

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
            ++ +   P+ +TY+ L +  CK+GK+ +   L D ++ +G+ PD V  + +I+G   + 
Sbjct: 521 TMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNG 580

Query: 438 -LRFFFQSVR-----MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
            L+  +Q  R       +      +N +++            KLF+ MG     PD  T+
Sbjct: 581 DLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTY 640

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            V+I G    G+  S      +M+++G  P + T+  +I+ L     +   + +   M  
Sbjct: 641 RVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVH 700

Query: 552 NGVAPDI 558
           NG+ P++
Sbjct: 701 NGIVPEV 707



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 184/387 (47%), Gaps = 31/387 (8%)

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++  A  +F+ +     +P+V++++ ++N   +    ++A +++  M  + +VPD+  +
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTF 149

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +I I    +  R      LL   + +G +L+ V + +V+  +        A + ++ ML 
Sbjct: 150 TIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLR 209

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P+V +++ L+  LC++G + E+  L  +VL + +  +L T++  I G C+ G L  
Sbjct: 210 IGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSG 269

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             S+ D++I+ GL                               P++  +NTL+ G C+ 
Sbjct: 270 AMSMLDSVIREGL------------------------------TPDVVTYNTLICGLCKN 299

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
               +  K    +    ++PD  T+  LI G    G L +A  +    + +G  PD  TY
Sbjct: 300 SNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTY 359

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            ++I+GL +   I   L +F      G+ P + +YN+L+  L +E  +  AL++  ++++
Sbjct: 360 CSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSE 419

Query: 587 RGLEPDIITYNTIICGYCSLNSCLIDG 613
            G   DI TYN +I G C +  C+ D 
Sbjct: 420 NGCSSDIWTYNLVINGLCKM-GCVSDA 445



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 32/283 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI+ Y +  K++ +++I   M   G+  +PD++                        
Sbjct: 464 FNTLIDGYCKQLKMETTIQILNKMWSHGV--TPDVI------------------------ 497

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++NGL +    E+       ++++G VPN +T N + + LC  G++  A  
Sbjct: 498 -----TYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD 552

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI-IYSILIDGL 293
           L D +L  G  P+ V+F+T+I+ F     L+ A+QL+  M E   V      Y+I+I+  
Sbjct: 553 LVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAF 612

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            +   L  G +L L     G   D   +  ++D +   G+     +    M+  GF+P++
Sbjct: 613 AEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSL 672

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
            ++  +I  LC Q R+ EA  +   ++   + P ++   S  D
Sbjct: 673 TTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSISEAD 715


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 221/405 (54%), Gaps = 6/405 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+ GL   G I  A  +  +++  GF PN+VT   ++  LC + Q+  A +LF  +
Sbjct: 128 TFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEM 187

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  P++ T+++LI+A C   + +    L N M++  ++P+++  +I++D L K G++
Sbjct: 188 IAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKV 247

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E ++++   +  G++ DVV ++++MD +    ++  AV+ +D M+  G + NV+SY+ L
Sbjct: 248 TEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTL 307

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+  R+ +A  LF ++  + L P+ +TYS+LI G C  G+L+D  +L++ M+  G 
Sbjct: 308 INGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQ 367

Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ V  S+L+     N  + +A+          L P++ ++N  +DG CR         
Sbjct: 368 IPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARD 427

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  +    ++PDV TH ++IRG+  +G L  A  LF +M + G   +  TY+ I  GL 
Sbjct: 428 LFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLL 487

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
           +    S  + + + M   G + D++   +L+ ML  +  LD ++K
Sbjct: 488 QNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDD-GLDQSVK 531



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 209/416 (50%), Gaps = 40/416 (9%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A S F  +L + P P +  F+ L+ +  K         L   M    + PD+   +I
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+      R+     +L   L  G + D   F++++     +G +G A+  +D+M+  G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI------------- 395
           F PNV++Y  L+ GLC+  +L EA  LF +++ + + P + TY+SLI             
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 396 ----------------------DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
                                 D  CK GK+ +   + D MI+ G++PD V  + L++G 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                M +A++ F   VR   + N+  +NTL++G C+++R    + LF  M    + P+ 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T++ LI G+   G L  AI LF +M+  G  P+++TYS ++  L K   ++  + + K 
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +E + + PD+ +YN+ ++ + +  +L+AA  LF  L  RGL+PD+ T+N +I G C
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLC 452



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 216/417 (51%), Gaps = 5/417 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++N       ++ A  +  ++++ G  P+  T   +++ LC+ G+IG A  +FD ++  G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNVVT+ TL+N  CK+ +L +A  L++ M+   + PD+  Y+ LI  L      K   
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            LL   +   +  +VV  + V+DA    G V  A    D M+ GG  P+V++Y+ L+ G 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C +  + EA  +F  ++      ++++Y++LI+G+CK  ++     L++ M ++ L P+ 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  S LI+GL     + DA+  F + V    IPNL  ++ L+D  C+  R  + + L   
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +   N+ PDV  + + I G+   G L +A  LF  +  RGL PDV T++ +I GL K   
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           +     +F+ M+ NG   +   YN +   L++      A++L  ++  RG   D+ T
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVST 513



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 218/430 (50%), Gaps = 7/430 (1%)

Query: 180 VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           ++EF  L+  + +         + +++   G  P++ T   ++   C   ++  A S+  
Sbjct: 56  IFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLA 115

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L +G +P+  TF+TL+   C   K+ +A  +++ M+     P+++ Y  L++GL K  
Sbjct: 116 KILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDR 175

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           +L E   L    + +G+  D+  ++S++ A   + +        + M+    +PNV+S +
Sbjct: 176 QLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLN 235

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           I++  LC++G++ EA  +   ++   +EP ++TY++L+DG C   ++ +   ++D M++ 
Sbjct: 236 IVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRN 295

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G   + V  + LING      +  A+  F +  R  LIPN   ++TL+ G C + R  D 
Sbjct: 296 GCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDA 355

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           + LF  M      P+++T+++L+  +     L+ A+ L   +    L PDV  Y+  I G
Sbjct: 356 IALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDG 415

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           + +  ++     +F  +   G+ PD+  +N+++  L K   LD A KLF ++ + G   +
Sbjct: 416 MCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRN 475

Query: 593 IITYNTIICG 602
             TYNTI  G
Sbjct: 476 GCTYNTITQG 485



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 87/173 (50%)

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + DAL  F + + M   P +F F  L+    ++K  +  + L   M  + I PDV T T+
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I        +  A+ +  ++LK G  PD  T++ ++ GL     I   L +F  M   G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             P++  Y  L+N L K+  L  AL LF ++  +G+ PDI TYN++I   C+L
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNL 209



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 123/257 (47%), Gaps = 4/257 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS--CLVDSNSVGQYY--KLC 170
           Y+ L++ +    ++DE+V++F  M   G   +      L++  C +       Y   ++C
Sbjct: 269 YAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMC 328

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           R         Y  L++GL   G +++A  +  +++  G +PN+VT + +L  LC N ++ 
Sbjct: 329 RQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLA 388

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +L   +      P+V  ++  I+  C+   LE A  L++ +    L PD+  ++I+I
Sbjct: 389 EAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMI 448

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K G L E ++L     + G   +   ++++    +      RA+Q  + ML  GF 
Sbjct: 449 RGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFS 508

Query: 351 PNVISYSILIKGLCQQG 367
            +V + ++L+K L   G
Sbjct: 509 ADVSTTALLVKMLSDDG 525


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 230/464 (49%), Gaps = 44/464 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V + L++ L  +G++++A     +V +    PN  TCN IL RL  +        LF+ L
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQL 183

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
               P PNV TF+ +I+  CKE +L +A  L++ M EM  +PD++ ++ LIDG  K G L
Sbjct: 184 ----PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGEL 239

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +L+      G K DVV ++++++ +   G +  A   +  M   G + NV+++S  
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +   C++G + EA  LF Q+ +R +  +  TY+ LIDG CK+G+L D   L D M+++G+
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359

Query: 420 KPDAVVCSLLINGL--------MGDALRFFFQS-VR------MTLIPNLF---------- 454
             + V  ++L++GL          D LR   ++ VR       TLI   F          
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 455 ---------------IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                          ++  L+ G C + +  +   L   M    ++P+ I +T ++    
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF 479

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G +  AI +  ++L  G  P+VITY A+I GL K  +I   +  F  M   G+ P++ 
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            Y  L++ L K   L+ A++LF ++  +G+  D + Y  ++ GY
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 247/512 (48%), Gaps = 24/512 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLC 170
           ++ +I+   + G++ E+  +F+ M +MG    PD+V    + L+D       + +  +L 
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCL--PDVVT--FNSLIDGYGKCGELDEVEQLV 246

Query: 171 RAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             MR  G       Y  L+N   + G +E A+     + + G + N+VT +  +   C  
Sbjct: 247 EEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKE 306

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A  LF  + + G   N  T++ LI+  CK  +L+ A  L + M+   +  +++ Y
Sbjct: 307 GLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTY 366

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++L+DGL K  ++ E  ++L      G++ + +++++++  +    +  +A+     M N
Sbjct: 367 TVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKN 426

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G   ++  Y  LI+GLC   +L EA  L  ++    LEP+ + Y++++D   KSGK+ +
Sbjct: 427 KGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPE 486

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
             ++   ++  G +P+ +    LI+GL     + +A+  F +   + L PN+  +  L+D
Sbjct: 487 AIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVD 546

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+     + V+LF  M    +  D + +T L+ G   QG+L  A  L  +M+  GL  
Sbjct: 547 GLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQL 606

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D+  Y+  I G      +     +F  M  +G+APD A+YN L++   K  NL+ A+ L 
Sbjct: 607 DLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQ 666

Query: 582 GQL-------TDRGLEPDIITYNTIICGYCSL 606
            ++       TD     D  +  T  C  C +
Sbjct: 667 DEMERVLPSCTDSDTATDAGSVCTTKCIRCQI 698


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 241/508 (47%), Gaps = 31/508 (6%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG----KGFCVYE 182
           K+     I + M   G Y SP +   L+     S      YKL + M       G+ VY 
Sbjct: 92  KLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYN 151

Query: 183 FLMNGLLR-----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
            L+ G+       K V++ A   + ++++ G V N V  +   + LC  G+   A ++  
Sbjct: 152 ILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIR 211

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            ++  G  P+  T+S +I   C  +K+EKAFQL+  M    + PD+ +Y+ LID   KAG
Sbjct: 212 EMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAG 271

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            +++           G   +VV +++++ AY+    V +A + Y+ ML+ G  PN+++Y+
Sbjct: 272 FIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYT 331

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLE-----------------PSLLTYSSLIDGFCK 400
            LI GLC+ G++ +A  ++  +    +E                 P++ TY +L+DG CK
Sbjct: 332 ALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCK 391

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
           + ++++   L  +M   G +P+ VV   LI+G      + +A   F   +     PN++ 
Sbjct: 392 AYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYT 451

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +++L+D   + KR    +K+   M   +  P+V+ +T +I G+   G    A  L   M 
Sbjct: 452 YSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMME 511

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           ++G  P+V+TY+A+I G  K   +   L + + M   G AP+   Y VL+N       LD
Sbjct: 512 EKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLD 571

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGY 603
            A KL  ++        +  Y  +I G+
Sbjct: 572 EAHKLLEEMKQTYWPRHVAGYRKVIEGF 599



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/627 (23%), Positives = 255/627 (40%), Gaps = 128/627 (20%)

Query: 58  THNCVSSPNI-AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS 116
           T  C  SP I   L+H   +S     A  +  KMV                    GC   
Sbjct: 105 TEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMV------------------QCGCQPG 146

Query: 117 FLIENYVRIGKIDESVE-----------IFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ 165
           +++ N + IG I  S E            +  M + G+ L+   +     CL       +
Sbjct: 147 YVVYN-ILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEK 205

Query: 166 YYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
            Y + R M  KGF      Y  ++  L     +E AF + +++ + G  P++     ++ 
Sbjct: 206 AYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLID 265

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
             C  G I  A + FD +   G  PNVVT++ LI+A+ K  K+ KA ++Y +M+     P
Sbjct: 266 SFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTP 325

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +++ Y+ LIDGL KAG++++ ++               ++  +    V I DV    +  
Sbjct: 326 NIVTYTALIDGLCKAGKIEKASQ---------------IYKIMKKENVEIPDVDMHFRVV 370

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           D   N    PNV +Y  L+ GLC+  ++ EA  L   + +   EP+ + Y +LIDG CK+
Sbjct: 371 DGASNE---PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKA 427

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIF 456
           GKL +   ++  M++ G  P+    S LI+ L  D     AL+   + +  +  PN+ I+
Sbjct: 428 GKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIY 487

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
             ++DG C++ +  +  KL ++M      P+V+T+T +I G    G +   + L  QM  
Sbjct: 488 TEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSS 547

Query: 517 RGLTPDVITYSAII------------HGLFK---------------------GKNISVGL 543
           +G  P+ +TY  +I            H L +                      +     L
Sbjct: 548 KGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASL 607

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNL----------------------------- 574
           ++   +  N   P   +Y VL++  IK   L                             
Sbjct: 608 YLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIE 667

Query: 575 --------DAALKLFGQLTDRGLEPDI 593
                   D A +L+  +  RG  P++
Sbjct: 668 NLSLAHKADKAFELYADMISRGSIPEL 694



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 214/457 (46%), Gaps = 33/457 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ-IGNASSLFDV 238
           +Y  +++GL    + E A     ++     +PN++T  +IL   C+N + +G    +  +
Sbjct: 44  LYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLT-YRILLCGCLNKEKLGRCKRILSM 102

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           ++  G  P+   F++L++A+C+      A++L   M++    P  ++Y+ILI G+  +  
Sbjct: 103 MITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSE- 161

Query: 299 LKEGNELLLTA-------LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            + G ++L  A       L+ G+ L+ V  S+      GIG   +A      M++ GF+P
Sbjct: 162 -EPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIP 220

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  +YS +I  LC   ++ +A  LF ++    + P +  Y++LID FCK+G +    + +
Sbjct: 221 DTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWF 280

Query: 412 DNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           D M + G  P+ V  + LI+  +       A   +   +     PN+  +  L+DG C+ 
Sbjct: 281 DEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKA 340

Query: 467 KRATDTVKLFMLMGMYNIK-----------------PDVITHTVLIRGIASQGSLSSAIL 509
            +     +++ +M   N++                 P+V T+  L+ G+     +  A  
Sbjct: 341 GKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARD 400

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           L   M   G  P+ + Y A+I G  K   +     +F  M   G  P++  Y+ L++ L 
Sbjct: 401 LLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLF 460

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           K+  LD ALK+  ++ +    P+++ Y  +I G C +
Sbjct: 461 KDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKV 497



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 185/409 (45%), Gaps = 30/409 (7%)

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC +G+   A SL +    V   P+ V ++ +I+  C+ +  E+A      M     +P+
Sbjct: 20  LCKSGKWREALSLLEKEEFV---PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPN 76

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           ++ Y IL+ G     +L     +L   +  G      +F+S++ AY   GD   A +   
Sbjct: 77  VLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLK 136

Query: 343 RMLNGGFLPNVISYSILIKGLC---QQGR--LVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +M+  G  P  + Y+ILI G+C   + G+  L  A   +G++L   +  + +  S+    
Sbjct: 137 KMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRC 196

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
            C  GK    +++   M+ +G  PD    S +I  L     +  A + F +  R  + P+
Sbjct: 197 LCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPD 256

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           ++++ TL+D  C+          F  M      P+V+T+T LI        +S A  ++ 
Sbjct: 257 VYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYE 316

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV-----------------A 555
            ML +G TP+++TY+A+I GL K   I     ++K+M++  V                  
Sbjct: 317 MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNE 376

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           P++  Y  L++ L K   +  A  L   ++  G EP+ + Y+ +I G C
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCC 425



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 105/295 (35%), Gaps = 83/295 (28%)

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQ 443
            T        CKSGK R+  SL +   K    PD V+ + +I+G     L  +A+ F  +
Sbjct: 11  FTLGCFAHSLCKSGKWREALSLLE---KEEFVPDTVLYTKMISGLCEASLFEEAMDFLTR 67

Query: 444 SVRMTLIPNLF-----------------------------------IFNTLMDGCCRLKR 468
               + +PN+                                    IFN+L+   CR   
Sbjct: 68  MRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGD 127

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ--------------------------- 501
                KL   M     +P  + + +LI GI S                            
Sbjct: 128 YAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNK 187

Query: 502 -------------GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
                        G    A  +  +M+ +G  PD  TYS +I  L     +     +F+ 
Sbjct: 188 VNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQE 247

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           M+RNG+APD+ +Y  L++   K   ++ A   F ++   G  P+++TY  +I  Y
Sbjct: 248 MKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAY 302



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 53/120 (44%)

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PD + +T +I G+        A+    +M      P+V+TY  ++ G    + +     +
Sbjct: 40  PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             +M   G  P   I+N L++   +  +   A KL  ++   G +P  + YN +I G CS
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS 159


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 223/426 (52%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+ GL  +G +  A  +  ++++ G  P++VT N I+  +C +G    A  L   +
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                K +V T+ST+I++ C++  ++ A  L+  M    +   ++ Y+ L+ GL KAG+ 
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +G  LL   + R +  +V+ F+ ++D +V  G +  A + Y  M+  G  PN+I+Y+ L
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G C Q RL EA  +   ++  +  P ++T++SLI G+C   ++ DG  ++ N+ KRGL
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             +AV  S+L+ G         A   F + V   ++P++  +  L+DG C   +    ++
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  +    +   ++ +T +I G+   G +  A  LF  +  +G+ P+V+TY+ +I GL 
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  ++S    + + ME +G AP+   YN L+   +++ +L A+ KL  ++   G   D  
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579

Query: 595 TYNTII 600
           +   +I
Sbjct: 580 SIKMVI 585



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 215/397 (54%), Gaps = 9/397 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG+ R G    A  + R++ +R    ++ T + I+  LC +G I  A SLF  +
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G K +VVT+++L+   CK  K      L   M+  ++VP++I +++L+D   K G+L
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E NEL    + RG+  +++ ++++MD Y     +  A    D M+     P++++++ L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKG C   R+ +   +F  +  R L  + +TYS L+ GFC+SGK++    L+  M+  G+
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434

Query: 420 KPDAVVCSLLINGL-----MGDALRFF--FQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            PD +   +L++GL     +  AL  F   Q  +M L   + ++ T+++G C+  +  D 
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL--GIVMYTTIIEGMCKGGKVEDA 492

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             LF  +    +KP+V+T+TV+I G+  +GSLS A +L  +M + G  P+  TY+ +I  
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
             +  +++    + + M+  G + D +   ++++ML+
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 239/466 (51%), Gaps = 8/466 (1%)

Query: 151 QRLMSCLVD---SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           +RL S +VD    +++  + ++ R+        +    + + R           +Q+   
Sbjct: 58  ERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   NI T N ++   C   +   A S+   ++ +G +P+  TF+TLI     E K+ +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L + M+E    PD++ Y+ +++G+ ++G      +LL    +R +K DV  +S+++D+
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G +  A+  +  M   G   +V++Y+ L++GLC+ G+  +   L   ++ R + P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++T++ L+D F K GKL++   LY  MI RG+ P+ +  + L++G      + +A     
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             VR    P++  F +L+ G C +KR  D +K+F  +    +  + +T+++L++G    G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A  LF +M+  G+ PDV+TY  ++ GL     +   L +F+ ++++ +   I +Y 
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            ++  + K   ++ A  LF  L  +G++P+++TY  +I G C   S
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 216/409 (52%), Gaps = 5/409 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A+ +  +V++ G+ P+  T N ++K L + G++  A  L D ++  G +P+VVT+++++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C+      A  L   M E ++  D+  YS +ID L + G +     L      +G+K 
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            VV ++S++      G           M++   +PNVI++++L+    ++G+L EA  L+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            +++ R + P+++TY++L+DG+C   +L +  ++ D M++    PD V  + LI G    
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + D ++ F    +  L+ N   ++ L+ G C+  +     +LF  M  + + PDV+T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L+ G+   G L  A+ +F  + K  +   ++ Y+ II G+ KG  +    ++F  +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            GV P++  Y V+++ L K+ +L  A  L  ++ + G  P+  TYNT+I
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/543 (23%), Positives = 256/543 (47%), Gaps = 24/543 (4%)

Query: 16  NKCYCSESKTHISDLQFNQANAILANLIKTNNPTPA-IQFFKWTHNCVSSPNIAQLIHVL 74
           N C+    ++ I D++ + A A+   +I++  P P+ + F ++      +     ++   
Sbjct: 53  NVCFRERLRSGIVDIKKDDAIALFQEMIRSR-PLPSLVDFSRFFSAIARTKQFNLVLDFC 111

Query: 75  LQSDMRDVASHVF--DKMVIQFGK------TYNFF-RLFRDSLGDFGCDYSFLIENYVRI 125
            Q ++  +A +++  + M+  F +       Y+   ++ +         ++ LI+     
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC---- 179
           GK+ E+V +   M + G    PD+V    +++ +  S        L R M  +       
Sbjct: 172 GKVSEAVVLVDRMVENGC--QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++ L R G I+ A  + +++  +G   ++VT N +++ LC  G+  + + L   +
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +     PNV+TF+ L++ F KE KL++A +LY  M+   + P++I Y+ L+DG     RL
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E N +L   +      D+V F+S++  Y  +  V   ++ +  +   G + N ++YSIL
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           ++G CQ G++  A  LF +++   + P ++TY  L+DG C +GKL     +++++ K  +
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
               V+ + +I G+     + DA   F       + PN+  +  ++ G C+    ++   
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M      P+  T+  LIR     G L+++  L  +M   G + D  +   +I  L 
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589

Query: 535 KGK 537
            G+
Sbjct: 590 SGE 592


>gi|449442212|ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Cucumis sativus]
 gi|449499387|ref|XP_004160802.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Cucumis sativus]
          Length = 633

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 221/451 (49%), Gaps = 50/451 (11%)

Query: 169 LCRAMRGKGFCV--------YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           +C A  G   CV        Y  ++  L  KG    A  + R++I+ GF  ++VT N +L
Sbjct: 117 ICLAKSGLQKCVLEATQQPDYTVMVRDLCLKGKFGAALLLRRKLIKEGFAVDLVTHNYLL 176

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LCIN  +  A SLF  +L +GP PN  T++ +I  FC    ++KA  L+  M+   + 
Sbjct: 177 NGLCINCDMEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIR 236

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL--DVVVFSSVMDAYVGIGDVGRAV 338
           P  I Y+IL+  L K G L +  +LL   L   +K   D +  + +MD+    GD  +AV
Sbjct: 237 PSRITYNILLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAV 296

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             +D+M+      +V++Y++LI GLC       A G    +L R   P + TY++LI  F
Sbjct: 297 ALWDKMVEKKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAF 356

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GDALR---FFFQSVRMTLIPNL 453
           CK G+  D + ++D M + G+ PD ++  ++I  L   GDA++   F    +  +++P  
Sbjct: 357 CKEGQFGDAYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPEP 416

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
            I+N ++D                  G Y                   G LS+AI    Q
Sbjct: 417 HIWNLIID----------------CYGRY-------------------GYLSNAISKRDQ 441

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           ML  G+ P+V TY+A+IH   +G NI     + K M   G+ PD+  YN+L+N   K   
Sbjct: 442 MLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFPDVVTYNLLINGACKHGQ 501

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L  AL+L+ ++  +G E D ITY  +I G+C
Sbjct: 502 LRFALQLYDEMLRKGYEADKITYTELINGHC 532



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 178/358 (49%), Gaps = 15/358 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+ +     +D+++++F  M + GI  S      L+  L     +    KL   + 
Sbjct: 207 YNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNILLHALCKRGILVDARKLLEVIL 266

Query: 175 GKGFCVYE------FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           G      +       LM+   + G    A  +  +++++    ++V  N ++  LC+N  
Sbjct: 267 GDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMVEKKTEIDVVAYNVLIHGLCLNQD 326

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A      +L  G  P++ T++TLI+AFCKE +   A+ ++++M  M + PD I+Y +
Sbjct: 327 KKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQFGDAYYIHDVMSRMGVSPDQILYKM 386

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I  L   G   + +E L + L++ +  +  +++ ++D Y   G +  A+   D+ML  G
Sbjct: 387 IIQALCMNGDAIKADEFLHSMLEKSMVPEPHIWNLIIDCYGRYGYLSNAISKRDQMLVAG 446

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV +Y+ LI    + G +  A  L  ++L+  L P ++TY+ LI+G CK G+LR   
Sbjct: 447 VQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFPDVVTYNLLINGACKHGQLRFAL 506

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVR----MTLIPNLFIFN 457
            LYD M+++G + D +  + LIN     G M +A   FF+  R    M ++P   IF 
Sbjct: 507 QLYDEMLRKGYEADKITYTELINGHCMCGEMKEAEDLFFELHRSGLPMDIVPFKVIFE 564


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 223/426 (52%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+ GL  +G +  A  +  ++++ G  P++VT N I+  +C +G    A  L   +
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                K +V T+ST+I++ C++  ++ A  L+  M    +   ++ Y+ L+ GL KAG+ 
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +G  LL   + R +  +V+ F+ ++D +V  G +  A + Y  M+  G  PN+I+Y+ L
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G C Q RL EA  +   ++  +  P ++T++SLI G+C   ++ DG  ++ N+ KRGL
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             +AV  S+L+ G         A   F + V   ++P++  +  L+DG C   +    ++
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  +    +   ++ +T +I G+   G +  A  LF  +  +G+ P+V+TY+ +I GL 
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  ++S    + + ME +G AP+   YN L+   +++ +L A+ KL  ++   G   D  
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579

Query: 595 TYNTII 600
           +   +I
Sbjct: 580 SIKMVI 585



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 215/397 (54%), Gaps = 9/397 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG+ R G    A  + R++ +R    ++ T + I+  LC +G I  A SLF  +
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G K +VVT+++L+   CK  K      L   M+  ++VP++I +++L+D   K G+L
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E NEL    + RG+  +++ ++++MD Y     +  A    D M+     P++++++ L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKG C   R+ +   +F  +  R L  + +TYS L+ GFC+SGK++    L+  M+  G+
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434

Query: 420 KPDAVVCSLLINGL-----MGDALRFF--FQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            PD +   +L++GL     +  AL  F   Q  +M L   + ++ T+++G C+  +  D 
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL--GIVMYTTIIEGMCKGGKVEDA 492

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             LF  +    +KP+V+T+TV+I G+  +GSLS A +L  +M + G  P+  TY+ +I  
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
             +  +++    + + M+  G + D +   ++++ML+
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 239/466 (51%), Gaps = 8/466 (1%)

Query: 151 QRLMSCLVD---SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           +RL S +VD    +++  + ++ R+        +    + + R           +Q+   
Sbjct: 58  ERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   NI T N ++   C   +   A S+   ++ +G +P+  TF+TLI     E K+ +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L + M+E    PD++ Y+ +++G+ ++G      +LL    +R +K DV  +S+++D+
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G +  A+  +  M   G   +V++Y+ L++GLC+ G+  +   L   ++ R + P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++T++ L+D F K GKL++   LY  MI RG+ P+ +  + L++G      + +A     
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             VR    P++  F +L+ G C +KR  D +K+F  +    +  + +T+++L++G    G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A  LF +M+  G+ PDV+TY  ++ GL     +   L +F+ ++++ +   I +Y 
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            ++  + K   ++ A  LF  L  +G++P+++TY  +I G C   S
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 216/409 (52%), Gaps = 5/409 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A+ +  +V++ G+ P+  T N ++K L + G++  A  L D ++  G +P+VVT+++++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C+      A  L   M E ++  D+  YS +ID L + G +     L      +G+K 
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            VV ++S++      G           M++   +PNVI++++L+    ++G+L EA  L+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            +++ R + P+++TY++L+DG+C   +L +  ++ D M++    PD V  + LI G    
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + D ++ F    +  L+ N   ++ L+ G C+  +     +LF  M  + + PDV+T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L+ G+   G L  A+ +F  + K  +   ++ Y+ II G+ KG  +    ++F  +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            GV P++  Y V+++ L K+ +L  A  L  ++ + G  P+  TYNT+I
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 194/422 (45%), Gaps = 61/422 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I++  R G ID ++ +F  M   GI  S                            
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSS---------------------------- 262

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+ GL + G   +   + + ++ R  VPN++T N +L      G++  A+ 
Sbjct: 263 ---VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L+  ++  G  PN++T++TL++ +C + +L +A  + +LM+     PD++ ++ LI G  
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
              R+ +G ++      RGL  + V +S ++  +   G +  A + +  M++ G LP+V+
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y IL+ GLC  G+L +A  +F  +   +++  ++ Y+++I+G CK GK+ D ++L+ ++
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             +G+KP+ +  +++I+GL                              C+    ++   
Sbjct: 500 PCKGVKPNVMTYTVMISGL------------------------------CKKGSLSEANI 529

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M      P+  T+  LIR     G L+++  L  +M   G + D  +   +I  L 
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589

Query: 535 KG 536
             
Sbjct: 590 SA 591



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 155/302 (51%), Gaps = 15/302 (4%)

Query: 321 FSSVMDAYV--------GIGDVGR--AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
           FSS+ +  V        GI D+ +  A+  +  M+    LP+++ +S     + +  +  
Sbjct: 46  FSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN 105

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
                  Q+ +  +  ++ T + +I+ FC+  K    +S+   ++K G +PD    + LI
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165

Query: 431 NGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
            GL     + +A+    + V     P++  +N++++G CR    +  + L   M   N+K
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
            DV T++ +I  +   G + +AI LF +M  +G+   V+TY++++ GL K    + G  +
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            K M    + P++  +NVLL++ +KE  L  A +L+ ++  RG+ P+IITYNT++ GYC 
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345

Query: 606 LN 607
            N
Sbjct: 346 QN 347


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 248/536 (46%), Gaps = 45/536 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S +I    + GK+ E   +   M +M +Y +      L+  L  +N       L   M 
Sbjct: 264 FSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV 323

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G      VY  LM+GL + G +  A    + +++   VPN+VT   ++  LC  G + 
Sbjct: 324 VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLS 383

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  +   +L     PNVVT+S++IN + K+  LE+A  L   M + ++VP+   Y  +I
Sbjct: 384 SAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVI 443

Query: 291 DGLFKAG-----------------------------------RLKEGNELLLTALDRGLK 315
           DGLFKAG                                   R+KE   L+   + +G+ 
Sbjct: 444 DGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 503

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           LD + ++S++D +   GD   A+   + M   G   +V+SY++LI G+ + G+ V A   
Sbjct: 504 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWA 562

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI----- 430
           +  +  + +EP + T++ +++   K G       L+D M   G+KP  + C++++     
Sbjct: 563 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 622

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           NG M +A+    Q + M + PNL  +   +D   + KRA    K    +  Y IK     
Sbjct: 623 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 682

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  LI  +   G    A ++   M  RG  PD +T+++++HG F G ++   L  + +M 
Sbjct: 683 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 742

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             G++P++A YN ++  L     +    K   ++  RG+ PD  TYN +I G   +
Sbjct: 743 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 798



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 232/495 (46%), Gaps = 42/495 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQYYK---LC 170
           Y+ +I      G  DE+ +  + M  MGI   PD V    + L+D    VG + +   L 
Sbjct: 166 YNTVISGLCEHGLADEAYQFLSEMVKMGIL--PDTVS--YNTLIDGFCKVGNFVRAKALV 221

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             +       +  L++       IE A+   R ++  GF P++VT + I+ RLC  G++ 
Sbjct: 222 DEISELNLITHTILLSSYYNLHAIEEAY---RDMVMSGFDPDVVTFSSIINRLCKGGKVL 278

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               L   +  +   PN VT++TL+++  K      A  LY+ M+   +  DL++Y++L+
Sbjct: 279 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLM 338

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGLFKAG L+E  +     L+     +VV +++++D     GD+  A     +ML    +
Sbjct: 339 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 398

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV++YS +I G  ++G L EA  L  ++  + + P+  TY ++IDG  K+GK      L
Sbjct: 399 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 458

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M   G++                               N +I + L++   R+ R  
Sbjct: 459 SKEMRLIGVE------------------------------ENNYILDALVNHLKRIGRIK 488

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +   L   M    +  D I +T LI      G   +A+    +M +RG+  DV++Y+ +I
Sbjct: 489 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 548

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G+ K   +      +K M   G+ PDIA +N+++N   K+ + +  LKL+ ++   G++
Sbjct: 549 SGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK 607

Query: 591 PDIITYNTIICGYCS 605
           P +++ N ++   C 
Sbjct: 608 PSLMSCNIVVGMLCE 622



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 223/432 (51%), Gaps = 31/432 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +++F +NGL+   V      ++ ++I  G  P++   N ++   C  G++  A SL    
Sbjct: 102 IHQFNVNGLVHDQV----SLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNR 157

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           ++     + VT++T+I+  C+    ++A+Q  + M++M ++PD + Y+ LIDG  K G  
Sbjct: 158 VI---SIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNF 214

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L    +D   +L+++  + ++ +Y  +  +  A   Y  M+  GF P+V+++S +
Sbjct: 215 VRAKAL----VDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSI 267

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           I  LC+ G+++E     G +L+R +E     P+ +TY++L+D   K+   R   +LY  M
Sbjct: 268 INRLCKGGKVLE-----GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 322

Query: 415 IKRGLKPDAVVCSLLINGLM--GDALRFFFQSVRMTL----IPNLFIFNTLMDGCCRLKR 468
           + RG+  D VV ++L++GL   GD LR   ++ +M L    +PN+  +  L+DG C+   
Sbjct: 323 VVRGIPVDLVVYTVLMDGLFKAGD-LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 381

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            +    +   M   ++ P+V+T++ +I G   +G L  A+ L  +M  + + P+  TY  
Sbjct: 382 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 441

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I GLFK     + + + K M   GV  +  I + L+N L +   +     L   +  +G
Sbjct: 442 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 501

Query: 589 LEPDIITYNTII 600
           +  D I Y ++I
Sbjct: 502 VTLDQINYTSLI 513



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 232/501 (46%), Gaps = 45/501 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I  YV+ G ++E+V +   M D  +   P+                          
Sbjct: 404 YSSMINGYVKKGMLEEAVSLLRKMEDQNVV--PN-------------------------- 435

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
             GF  Y  +++GL + G  E A  + +++   G   N    + ++  L   G+I     
Sbjct: 436 --GF-TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 492

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   ++  G   + + +++LI+ F K    E A      M E  +  D++ Y++LI G+ 
Sbjct: 493 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML 552

Query: 295 KAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
           K G++  G +     + ++G++ D+  F+ +M++    GD    ++ +D+M + G  P++
Sbjct: 553 KFGKV--GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSL 610

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           +S +I++  LC+ G++ EA  +  Q+++  + P+L TY   +D   K  +    F  ++ 
Sbjct: 611 MSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHET 670

Query: 414 MIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG---CCR 465
           ++  G+K    V + LI      G+   A            IP+   FN+LM G      
Sbjct: 671 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 730

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           +++A  T  + M  G   I P+V T+  +IRG++  G +        +M  RG+ PD  T
Sbjct: 731 VRKALSTYSVMMEAG---ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFT 787

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+A+I G  K  N+   + ++  M  +G+ P  + YNVL++       +  A +L  ++ 
Sbjct: 788 YNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMG 847

Query: 586 DRGLEPDIITYNTIICGYCSL 606
            RG+ P+  TY T+I G C L
Sbjct: 848 KRGVSPNTSTYCTMISGLCKL 868



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 237/530 (44%), Gaps = 18/530 (3%)

Query: 87  FDKMVIQFGKTYNFFRL--FRDSLGDFG-CDYSFLIENYVRIGKIDESVEIFAYMSDMGI 143
           ++ ++  F K  NF R     D + +     ++ L+ +Y  +  I+E     AY   +  
Sbjct: 201 YNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEE-----AYRDMVMS 255

Query: 144 YLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG----KGFCVYEFLMNGLLRKGVIENA 197
              PD+V    +++ L     V +   L R M           Y  L++ L +  +  +A
Sbjct: 256 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 315

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
             ++ Q++ RG   ++V    ++  L   G +  A   F +LL     PNVVT++ L++ 
Sbjct: 316 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 375

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
            CK   L  A  +   M+E  ++P+++ YS +I+G  K G L+E   LL    D+ +  +
Sbjct: 376 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 435

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
              + +V+D     G    A++    M   G   N      L+  L + GR+ E  GL  
Sbjct: 436 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 495

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--- 434
            ++ + +    + Y+SLID F K G      +  + M +RG+  D V  ++LI+G++   
Sbjct: 496 DMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG 555

Query: 435 GDALRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
                + ++ +R   I P++  FN +M+   +   +   +KL+  M    IKP +++  +
Sbjct: 556 KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNI 615

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           ++  +   G +  AI +  QM+   + P++ TY   +    K K         + +   G
Sbjct: 616 VVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG 675

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           +     +YN L+  L K      A  + G +  RG  PD +T+N+++ GY
Sbjct: 676 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 725



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 169/362 (46%), Gaps = 10/362 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           +Y+ LI+ + + G  + ++     M + G+         L+S ++    VG  +   + M
Sbjct: 508 NYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY-KGM 566

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           R KG       +  +MN   ++G  E    +  ++   G  P++++CN ++  LC NG++
Sbjct: 567 REKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKM 626

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  + + ++L+   PN+ T+   ++   K  + +  F+ +  ++   +     +Y+ L
Sbjct: 627 EEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 686

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I  L K G  K+   ++     RG   D V F+S+M  Y     V +A+ TY  M+  G 
Sbjct: 687 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 746

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            PNV +Y+ +I+GL   G + E      ++  R + P   TY++LI G  K G ++   +
Sbjct: 747 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 806

Query: 410 LYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           +Y  MI  GL P     ++LI+     G M  A     +  +  + PN   + T++ G C
Sbjct: 807 IYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 866

Query: 465 RL 466
           +L
Sbjct: 867 KL 868



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 165/366 (45%), Gaps = 16/366 (4%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP-DLIIYSILIDGLFK----AGRLKE 301
           N  +FS++      E++ E +  +     + DL P    +Y  L   LF+      RL  
Sbjct: 20  NCRSFSSIKRPQIPESE-ETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYG 78

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLNGGFLPNVISYSILI 360
               L      G+  D  +++S++  +   G V   V   Y +M+  G  P+V + ++LI
Sbjct: 79  AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 138

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              C+ GRL  A  L      R +    +TY+++I G C+ G   + +     M+K G+ 
Sbjct: 139 HSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 195

Query: 421 PDAVVCSLLINGL--MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           PD V  + LI+G   +G+ +R       ++ + NL     L+     L    +  +  ++
Sbjct: 196 PDTVSYNTLIDGFCKVGNFVRAKALVDEISEL-NLITHTILLSSYYNLHAIEEAYRDMVM 254

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
            G     PDV+T + +I  +   G +    LL  +M +  + P+ +TY+ ++  LFK   
Sbjct: 255 SG---FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 311

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
               L ++  M   G+  D+ +Y VL++ L K  +L  A K F  L +    P+++TY  
Sbjct: 312 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 371

Query: 599 IICGYC 604
           ++ G C
Sbjct: 372 LVDGLC 377



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 11/194 (5%)

Query: 415 IKRGLKPDAVVCSLLINGLMGDA-LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           IKR   P++   SL I     D  L      V ++L   LF    L   C RL  A  T+
Sbjct: 27  IKRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSLFHTLF---RLYLSCERLYGAARTL 83

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI-LLFFQMLKRGLTPDVITYSAIIHG 532
                M  + + PD      LI      G +   + L++ +M+  G++PDV   + +IH 
Sbjct: 84  SA---MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHS 140

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
             K   +S  +    L+    ++ D   YN +++ L +    D A +   ++   G+ PD
Sbjct: 141 FCKVGRLSFAI---SLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPD 197

Query: 593 IITYNTIICGYCSL 606
            ++YNT+I G+C +
Sbjct: 198 TVSYNTLIDGFCKV 211


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 147/593 (24%), Positives = 283/593 (47%), Gaps = 54/593 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N ++    K  +   A   FK        P++   + ++H L ++   D A     +MV 
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +     N+              Y+ LI  Y   G+  E+V +F  M    I   PD+V  
Sbjct: 285 KGVLPDNW-------------TYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL--PDVVAL 329

Query: 151 QRLMSCLVDSNSVGQYYKL--CRAMRGKGFCV--YEFLMNGLLRKGVIENAFHMHRQVIQ 206
             LM  L     + +   +    AM+G+   V  Y  ++NG   KG + +   +   ++ 
Sbjct: 330 NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P+I T N ++K     G +  A  +F+ +   G KP+VVT+ T+I A C+  K++ 
Sbjct: 390 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A + +N M++  +VPD   Y  LI G    G L +  EL+   ++ G++LD+V F S+++
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               +G V  A   +D  +N G  P+ + Y++L+ G C  G++ +A  +F  ++   +EP
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
           +++ Y +L++G+CK G++ +G SL+  M+++G+KP  ++ +++I+GL        F++ R
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL--------FEAGR 621

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              +P    F+ + +                      I  +  T+++++RG+        
Sbjct: 622 T--VPAKVKFHEMTES--------------------GIAMNKCTYSIVLRGLFKNRCFDE 659

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           AI LF ++    +  D+IT + +I G+F+ + +     +F  + R+G+ P    Y++++ 
Sbjct: 660 AIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMIT 719

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            L+KE  ++ A  +F  + + G EPD    N ++      N  +  G + S+I
Sbjct: 720 NLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 772



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/552 (26%), Positives = 258/552 (46%), Gaps = 51/552 (9%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMS-DMGIYLSPDLVQR--LMSC 156
           F +L R  L       S L++ +    + DE+++I  + + ++G    PD+     L+  
Sbjct: 136 FGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCV--PDVFSYNILLKS 193

Query: 157 LVDSNSVGQYYKLCRAM-RGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
           L +    GQ   L R M  G   C      Y  +++G  ++G +  A  + ++++QRG  
Sbjct: 194 LCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 253

Query: 211 PNIVTCNKILKRLC-----------------------------------INGQIGNASSL 235
           P++VT + ++  LC                                     GQ   A  +
Sbjct: 254 PDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 313

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F  +      P+VV  +TL+ + CK  K+++A  +++ M      PD+  Y+I+++G   
Sbjct: 314 FKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYAT 373

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G L +  +L    L  G+  D+  F+ ++ AY   G + +A+  ++ M + G  P+V++
Sbjct: 374 KGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVT 433

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  +I  LC+ G++ +A   F Q++ + + P    Y  LI GFC  G L     L   ++
Sbjct: 434 YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM 493

Query: 416 KRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G++ D V    +IN     G + DA   F  +V + L P+  ++N LMDG C + +  
Sbjct: 494 NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKME 553

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             +++F  M    I+P+V+ +  L+ G    G +   + LF +ML++G+ P  I Y+ II
Sbjct: 554 KALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII 613

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GLF+          F  M  +G+A +   Y+++L  L K    D A+ LF +L    ++
Sbjct: 614 DGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVK 673

Query: 591 PDIITYNTIICG 602
            DIIT NT+I G
Sbjct: 674 IDIITLNTMIAG 685



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 132/282 (46%), Gaps = 17/282 (6%)

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-----LEPSLLT 390
           R     DR LNG FL  +          C  G  + A  LF +   R      L P+  T
Sbjct: 60  RGTPVLDRDLNG-FLAALARAPS--SAACGSGPAL-AVALFNRAASRAQGPRVLSPTSYT 115

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF-QS 444
           Y+ L+D   ++ +     + +  +++ GL+ DA++ S L+ G        +AL     ++
Sbjct: 116 YAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRT 175

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVITHTVLIRGIASQG 502
             +  +P++F +N L+   C   ++     L  +M  G     PDV+ +  +I G   +G
Sbjct: 176 PELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEG 235

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            ++ A  LF +M++RG+ PD++TYS+++H L K + +       + M   GV PD   YN
Sbjct: 236 DVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYN 295

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L+           A+++F ++  + + PD++  NT++   C
Sbjct: 296 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLC 337



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 16/290 (5%)

Query: 337 AVQTYDRMLNGGFLPNVIS-----YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           AV  ++R  +    P V+S     Y+IL+    +  R   A   FGQ+L   L    +  
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151

Query: 392 SSLIDGFCKSGKLRDGFS-LYDNMIKRGLKPDAVVCSLLI--------NGLMGDALRFFF 442
           S L+ GFC++ +  +    L     + G  PD    ++L+        +G   D LR   
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA 211

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +       P++  +NT++DG  +         LF  M    I PD++T++ ++  +    
Sbjct: 212 EG-GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR 270

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++  A     QM+ +G+ PD  TY+ +I+G          + +FK M R  + PD+   N
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALN 330

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
            L+  L K   +  A  +F  +  +G  PD+ +Y  ++ GY +   CL+D
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYAT-KGCLVD 379



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 31/292 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ Y  +GK+++++ +F  M   GI               + N VG          
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGI---------------EPNVVG---------- 573

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+NG  + G I+    + R+++Q+G  P+ +  N I+  L   G+   A  
Sbjct: 574 ------YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            F  +   G   N  T+S ++    K    ++A  L+  +  M++  D+I  + +I G+F
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           +  R++E  +L  +    GL    V +S ++   +  G V  A   +  M N G  P+  
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSR 747

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
             + +++ L ++  +V A     ++  R      LT   L+D F   G  R+
Sbjct: 748 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 223/426 (52%), Gaps = 5/426 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+ GL  +G +  A  +  ++++ G  P++VT N I+  +C +G    A  L   +
Sbjct: 150 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 209

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                K +V T+ST+I++ C++  ++ A  L+  M    +   ++ Y+ L+ GL KAG+ 
Sbjct: 210 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 269

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +G  LL   + R +  +V+ F+ ++D +V  G +  A + Y  M+  G  PN+I+Y+ L
Sbjct: 270 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 329

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G C Q RL EA  +   ++  +  P ++T++SLI G+C   ++ DG  ++ N+ KRGL
Sbjct: 330 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 389

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             +AV  S+L+ G         A   F + V   ++P++  +  L+DG C   +    ++
Sbjct: 390 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 449

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  +    +   ++ +T +I G+   G +  A  LF  +  +G+ P+V+TY+ +I GL 
Sbjct: 450 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 509

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  ++S    + + ME +G AP+   YN L+   +++ +L A+ KL  ++   G   D  
Sbjct: 510 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 569

Query: 595 TYNTII 600
           +   +I
Sbjct: 570 SIKMVI 575



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 215/397 (54%), Gaps = 9/397 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG+ R G    A  + R++ +R    ++ T + I+  LC +G I  A SLF  +
Sbjct: 185 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 244

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G K +VVT+++L+   CK  K      L   M+  ++VP++I +++L+D   K G+L
Sbjct: 245 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 304

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E NEL    + RG+  +++ ++++MD Y     +  A    D M+     P++++++ L
Sbjct: 305 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 364

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKG C   R+ +   +F  +  R L  + +TYS L+ GFC+SGK++    L+  M+  G+
Sbjct: 365 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 424

Query: 420 KPDAVVCSLLINGL-----MGDALRFF--FQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            PD +   +L++GL     +  AL  F   Q  +M L   + ++ T+++G C+  +  D 
Sbjct: 425 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL--GIVMYTTIIEGMCKGGKVEDA 482

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             LF  +    +KP+V+T+TV+I G+  +GSLS A +L  +M + G  P+  TY+ +I  
Sbjct: 483 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 542

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
             +  +++    + + M+  G + D +   ++++ML+
Sbjct: 543 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 579



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 239/466 (51%), Gaps = 8/466 (1%)

Query: 151 QRLMSCLVD---SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           +RL S +VD    +++  + ++ R+        +    + + R           +Q+   
Sbjct: 48  ERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 107

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   NI T N ++   C   +   A S+   ++ +G +P+  TF+TLI     E K+ +A
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L + M+E    PD++ Y+ +++G+ ++G      +LL    +R +K DV  +S+++D+
Sbjct: 168 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 227

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G +  A+  +  M   G   +V++Y+ L++GLC+ G+  +   L   ++ R + P+
Sbjct: 228 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 287

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++T++ L+D F K GKL++   LY  MI RG+ P+ +  + L++G      + +A     
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 347

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             VR    P++  F +L+ G C +KR  D +K+F  +    +  + +T+++L++G    G
Sbjct: 348 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 407

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A  LF +M+  G+ PDV+TY  ++ GL     +   L +F+ ++++ +   I +Y 
Sbjct: 408 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 467

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            ++  + K   ++ A  LF  L  +G++P+++TY  +I G C   S
Sbjct: 468 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 513



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 216/409 (52%), Gaps = 5/409 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A+ +  +V++ G+ P+  T N ++K L + G++  A  L D ++  G +P+VVT+++++N
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C+      A  L   M E ++  D+  YS +ID L + G +     L      +G+K 
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            VV ++S++      G           M++   +PNVI++++L+    ++G+L EA  L+
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 311

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            +++ R + P+++TY++L+DG+C   +L +  ++ D M++    PD V  + LI G    
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 371

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + D ++ F    +  L+ N   ++ L+ G C+  +     +LF  M  + + PDV+T+
Sbjct: 372 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L+ G+   G L  A+ +F  + K  +   ++ Y+ II G+ KG  +    ++F  +  
Sbjct: 432 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 491

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            GV P++  Y V+++ L K+ +L  A  L  ++ + G  P+  TYNT+I
Sbjct: 492 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 540



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 190/422 (45%), Gaps = 61/422 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I++  R G ID ++ +F  M   GI  S                            
Sbjct: 221 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSS---------------------------- 252

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+ GL + G   +   + + ++ R  VPN++T N +L      G++  A+ 
Sbjct: 253 ---VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 309

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L+  ++  G  PN++T++TL++ +C + +L +A  + +LM+     PD++ ++ LI G  
Sbjct: 310 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 369

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
              R+ +G ++      RGL  + V +S ++  +   G +  A + +  M++ G LP+V+
Sbjct: 370 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 429

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y IL+ GLC  G+L +A  +F  +   +++  ++ Y+++I+G CK GK+ D ++L+   
Sbjct: 430 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF--- 486

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
                      CSL   G+                 PN+  +  ++ G C+    ++   
Sbjct: 487 -----------CSLPCKGVK----------------PNVMTYTVMISGLCKKGSLSEANI 519

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M      P+  T+  LIR     G L+++  L  +M   G + D  +   +I  L 
Sbjct: 520 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 579

Query: 535 KG 536
             
Sbjct: 580 SA 581



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/339 (20%), Positives = 139/339 (41%), Gaps = 40/339 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L++     GK+++++EIF  +    + L   +   ++  +     V   + L  ++ 
Sbjct: 431 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 490

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  +++GL +KG +  A  + R++ + G  PN  T N +++    +G + 
Sbjct: 491 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 550

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK-------LEKAFQLYNLMMEMDLVPDL 283
            ++ L + +   G   +  +   +I+      K       L K  +    ++E+     +
Sbjct: 551 ASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKI 610

Query: 284 IIYSILIDGLFKAGRLK--------EGNELLLTALDRGLK-------------LDVVVFS 322
            + S+    +F    +         E   +    L+R L+              DV V  
Sbjct: 611 RLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLV 670

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR---LVEACGLFGQV 379
           +      G+ D        D M++     + + Y+     + + GR   +V A  L  ++
Sbjct: 671 TNELLTWGLEDA-----ECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEM 725

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           + R + P+ +TYSSLIDGFCK  +L +   + D M+ +G
Sbjct: 726 IQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 230/464 (49%), Gaps = 44/464 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V + L++ L  +G++++A     +V +    PN  TCN IL RL  +        LF+ L
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQL 183

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
               P PNV TF+ +I+  CKE +L +A  L++ M EM  +PD++ ++ LIDG  K G L
Sbjct: 184 ----PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGEL 239

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +L+      G K DVV ++++++ +   G +  A   +  M   G + NV+++S  
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +   C++G + EA  LF Q+ +R +  +  TY+ LIDG CK+G+L D   L D M+++G+
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359

Query: 420 KPDAVVCSLLINGL--------MGDALRFFFQS-VR------MTLIPNLF---------- 454
             + V  ++L++GL          D LR   ++ VR       TLI   F          
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 455 ---------------IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                          ++  L+ G C + +  +   L   M    ++P+ I +T ++    
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF 479

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G +  AI +  ++L  G  P+VITY A+I GL K  +I   +  F  M   G+ P++ 
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            Y  L++ L K   L+ A++LF ++  +G+  D + Y  ++ GY
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 239/483 (49%), Gaps = 17/483 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLC 170
           ++ +I+   + G++ E+  +F+ M +MG    PD+V    + L+D       + +  +L 
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCL--PDVVT--FNSLIDGYGKCGELDEVEQLV 246

Query: 171 RAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             MR  G       Y  L+N   + G +E A+     + + G + N+VT +  +   C  
Sbjct: 247 EEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKE 306

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A  LF  + + G   N  T++ LI+  CK  +L+ A  L + M+   +  +++ Y
Sbjct: 307 GLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTY 366

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++L+DGL K  ++ E  ++L      G++ + +++++++  +    +  +A+     M N
Sbjct: 367 TVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKN 426

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G   ++  Y  LI+GLC   +L EA  L  ++    LEP+ + Y++++D   KSGK+ +
Sbjct: 427 KGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPE 486

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
             ++   ++  G +P+ +    LI+GL     + +A+  F +   + L PN+  +  L+D
Sbjct: 487 AIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVD 546

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+     + V+LF  M    +  D + +T L+ G   QG+L  A  L  +M+  GL  
Sbjct: 547 GLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQL 606

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D+  Y+  I G      +     +F  M  +G+APD A+YN L++   K  NL+ A+ L 
Sbjct: 607 DLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQ 666

Query: 582 GQL 584
            ++
Sbjct: 667 DEM 669


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 248/536 (46%), Gaps = 45/536 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S +I    + GK+ E   +   M +M +Y +      L+  L  +N       L   M 
Sbjct: 262 FSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV 321

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G      VY  LM+GL + G +  A    + +++   VPN+VT   ++  LC  G + 
Sbjct: 322 VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLS 381

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  +   +L     PNVVT+S++IN + K+  LE+A  L   M + ++VP+   Y  +I
Sbjct: 382 SAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVI 441

Query: 291 DGLFKAG-----------------------------------RLKEGNELLLTALDRGLK 315
           DGLFKAG                                   R+KE   L+   + +G+ 
Sbjct: 442 DGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           LD + ++S++D +   GD   A+   + M   G   +V+SY++LI G+ + G+ V A   
Sbjct: 502 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWA 560

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI----- 430
           +  +  + +EP + T++ +++   K G       L+D M   G+KP  + C++++     
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 620

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           NG M +A+    Q + M + PNL  +   +D   + KRA    K    +  Y IK     
Sbjct: 621 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 680

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  LI  +   G    A ++   M  RG  PD +T+++++HG F G ++   L  + +M 
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             G++P++A YN ++  L     +    K   ++  RG+ PD  TYN +I G   +
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 796



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 232/495 (46%), Gaps = 42/495 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQYYK---LC 170
           Y+ +I      G  DE+ +  + M  MGI   PD V    + L+D    VG + +   L 
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGIL--PDTVS--YNTLIDGFCKVGNFVRAKALV 219

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             +       +  L++       IE A+   R ++  GF P++VT + I+ RLC  G++ 
Sbjct: 220 DEISELNLITHTILLSSYYNLHAIEEAY---RDMVMSGFDPDVVTFSSIINRLCKGGKVL 276

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               L   +  +   PN VT++TL+++  K      A  LY+ M+   +  DL++Y++L+
Sbjct: 277 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLM 336

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGLFKAG L+E  +     L+     +VV +++++D     GD+  A     +ML    +
Sbjct: 337 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 396

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV++YS +I G  ++G L EA  L  ++  + + P+  TY ++IDG  K+GK      L
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M   G++                               N +I + L++   R+ R  
Sbjct: 457 SKEMRLIGVE------------------------------ENNYILDALVNHLKRIGRIK 486

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +   L   M    +  D I +T LI      G   +A+    +M +RG+  DV++Y+ +I
Sbjct: 487 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 546

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G+ K   +      +K M   G+ PDIA +N+++N   K+ + +  LKL+ ++   G++
Sbjct: 547 SGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK 605

Query: 591 PDIITYNTIICGYCS 605
           P +++ N ++   C 
Sbjct: 606 PSLMSCNIVVGMLCE 620



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 223/432 (51%), Gaps = 31/432 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +++F +NGL+   V      ++ ++I  G  P++   N ++   C  G++  A SL    
Sbjct: 100 IHQFNVNGLVHDQV----SLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNR 155

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           ++     + VT++T+I+  C+    ++A+Q  + M++M ++PD + Y+ LIDG  K G  
Sbjct: 156 VI---SIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNF 212

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L    +D   +L+++  + ++ +Y  +  +  A   Y  M+  GF P+V+++S +
Sbjct: 213 VRAKAL----VDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSI 265

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           I  LC+ G+++E     G +L+R +E     P+ +TY++L+D   K+   R   +LY  M
Sbjct: 266 INRLCKGGKVLE-----GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 320

Query: 415 IKRGLKPDAVVCSLLINGLM--GDALRFFFQSVRMTL----IPNLFIFNTLMDGCCRLKR 468
           + RG+  D VV ++L++GL   GD LR   ++ +M L    +PN+  +  L+DG C+   
Sbjct: 321 VVRGIPVDLVVYTVLMDGLFKAGD-LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 379

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            +    +   M   ++ P+V+T++ +I G   +G L  A+ L  +M  + + P+  TY  
Sbjct: 380 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I GLFK     + + + K M   GV  +  I + L+N L +   +     L   +  +G
Sbjct: 440 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499

Query: 589 LEPDIITYNTII 600
           +  D I Y ++I
Sbjct: 500 VTLDQINYTSLI 511



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 232/501 (46%), Gaps = 45/501 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I  YV+ G ++E+V +   M D  +   P+                          
Sbjct: 402 YSSMINGYVKKGMLEEAVSLLRKMEDQNVV--PN-------------------------- 433

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
             GF  Y  +++GL + G  E A  + +++   G   N    + ++  L   G+I     
Sbjct: 434 --GF-TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 490

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   ++  G   + + +++LI+ F K    E A      M E  +  D++ Y++LI G+ 
Sbjct: 491 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML 550

Query: 295 KAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
           K G++  G +     + ++G++ D+  F+ +M++    GD    ++ +D+M + G  P++
Sbjct: 551 KFGKV--GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSL 608

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           +S +I++  LC+ G++ EA  +  Q+++  + P+L TY   +D   K  +    F  ++ 
Sbjct: 609 MSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHET 668

Query: 414 MIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG---CCR 465
           ++  G+K    V + LI      G+   A            IP+   FN+LM G      
Sbjct: 669 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 728

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           +++A  T  + M  G   I P+V T+  +IRG++  G +        +M  RG+ PD  T
Sbjct: 729 VRKALSTYSVMMEAG---ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFT 785

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+A+I G  K  N+   + ++  M  +G+ P  + YNVL++       +  A +L  ++ 
Sbjct: 786 YNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMG 845

Query: 586 DRGLEPDIITYNTIICGYCSL 606
            RG+ P+  TY T+I G C L
Sbjct: 846 KRGVSPNTSTYCTMISGLCKL 866



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 237/530 (44%), Gaps = 18/530 (3%)

Query: 87  FDKMVIQFGKTYNFFRL--FRDSLGDFG-CDYSFLIENYVRIGKIDESVEIFAYMSDMGI 143
           ++ ++  F K  NF R     D + +     ++ L+ +Y  +  I+E     AY   +  
Sbjct: 199 YNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEE-----AYRDMVMS 253

Query: 144 YLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG----KGFCVYEFLMNGLLRKGVIENA 197
              PD+V    +++ L     V +   L R M           Y  L++ L +  +  +A
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
             ++ Q++ RG   ++V    ++  L   G +  A   F +LL     PNVVT++ L++ 
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
            CK   L  A  +   M+E  ++P+++ YS +I+G  K G L+E   LL    D+ +  +
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
              + +V+D     G    A++    M   G   N      L+  L + GR+ E  GL  
Sbjct: 434 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--- 434
            ++ + +    + Y+SLID F K G      +  + M +RG+  D V  ++LI+G++   
Sbjct: 494 DMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG 553

Query: 435 GDALRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
                + ++ +R   I P++  FN +M+   +   +   +KL+  M    IKP +++  +
Sbjct: 554 KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNI 613

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           ++  +   G +  AI +  QM+   + P++ TY   +    K K         + +   G
Sbjct: 614 VVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG 673

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           +     +YN L+  L K      A  + G +  RG  PD +T+N+++ GY
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 723



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 169/362 (46%), Gaps = 10/362 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           +Y+ LI+ + + G  + ++     M + G+         L+S ++    VG  +   + M
Sbjct: 506 NYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY-KGM 564

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           R KG       +  +MN   ++G  E    +  ++   G  P++++CN ++  LC NG++
Sbjct: 565 REKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKM 624

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  + + ++L+   PN+ T+   ++   K  + +  F+ +  ++   +     +Y+ L
Sbjct: 625 EEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 684

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I  L K G  K+   ++     RG   D V F+S+M  Y     V +A+ TY  M+  G 
Sbjct: 685 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 744

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            PNV +Y+ +I+GL   G + E      ++  R + P   TY++LI G  K G ++   +
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 804

Query: 410 LYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           +Y  MI  GL P     ++LI+     G M  A     +  +  + PN   + T++ G C
Sbjct: 805 IYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864

Query: 465 RL 466
           +L
Sbjct: 865 KL 866



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 165/366 (45%), Gaps = 16/366 (4%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP-DLIIYSILIDGLFK----AGRLKE 301
           N  +FS++      E++ E +  +     + DL P    +Y  L   LF+      RL  
Sbjct: 18  NCRSFSSIKRPQIPESE-ETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYG 76

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLNGGFLPNVISYSILI 360
               L      G+  D  +++S++  +   G V   V   Y +M+  G  P+V + ++LI
Sbjct: 77  AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              C+ GRL  A  L      R +    +TY+++I G C+ G   + +     M+K G+ 
Sbjct: 137 HSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 193

Query: 421 PDAVVCSLLINGL--MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           PD V  + LI+G   +G+ +R       ++ + NL     L+     L    +  +  ++
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISEL-NLITHTILLSSYYNLHAIEEAYRDMVM 252

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
            G     PDV+T + +I  +   G +    LL  +M +  + P+ +TY+ ++  LFK   
Sbjct: 253 SG---FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 309

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
               L ++  M   G+  D+ +Y VL++ L K  +L  A K F  L +    P+++TY  
Sbjct: 310 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 369

Query: 599 IICGYC 604
           ++ G C
Sbjct: 370 LVDGLC 375



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 11/194 (5%)

Query: 415 IKRGLKPDAVVCSLLINGLMGDA-LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           IKR   P++   SL I     D  L      V ++L   LF    L   C RL  A  T+
Sbjct: 25  IKRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSLFHTLF---RLYLSCERLYGAARTL 81

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI-LLFFQMLKRGLTPDVITYSAIIHG 532
                M  + + PD      LI      G +   + L++ +M+  G++PDV   + +IH 
Sbjct: 82  SA---MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHS 138

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
             K   +S  +    L+    ++ D   YN +++ L +    D A +   ++   G+ PD
Sbjct: 139 FCKVGRLSFAI---SLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPD 195

Query: 593 IITYNTIICGYCSL 606
            ++YNT+I G+C +
Sbjct: 196 TVSYNTLIDGFCKV 209


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 231/468 (49%), Gaps = 42/468 (8%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C Y  L+ G    G   +AF +  ++ + G  P +VT N ++  LC +G + +A  LFD 
Sbjct: 246 CSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDE 305

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK--- 295
           ++ VG + N +TF+ L++ + K  ++++A+     M    LVPD   ++IL  G +K   
Sbjct: 306 MVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGK 365

Query: 296 ---------------------------------AGRLKEGNELLLTALDRGLKLDVVVFS 322
                                             GRL +  +L+ +A+++G+ + V  F+
Sbjct: 366 AVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFN 425

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++ AY   G   +A++ Y  M   G +P+  +++ LI GLC QGRL +A  L   ++ +
Sbjct: 426 ALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICK 485

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
                  +++  +D + +SG +      +D+M+K G++PD +  S  I+GL     + +A
Sbjct: 486 GYCVGT-SFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEA 544

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            + F +      +PN   +N+L+   CR+   ++ +KL   M    + PDV T  +LI G
Sbjct: 545 YQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDG 604

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
              +G L      F  M   GLTPDV+TY+ II+     +++S  +     M  +G  PD
Sbjct: 605 FCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPD 664

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           I  YN+ ++ L     L+ A+K+  +L   G  P+ +TYNT++ G CS
Sbjct: 665 IFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICS 712



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 238/521 (45%), Gaps = 43/521 (8%)

Query: 94  FGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           FG+  + F+L  D + + GC      Y+ L+      G + ++  +F  M  +GI  +  
Sbjct: 258 FGQAGDAFQLL-DEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTI 316

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
               L+     +  + + Y  CR M+ +G     C +  L  G  + G      H  +++
Sbjct: 317 TFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQEL 376

Query: 205 IQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
            +  G   +  + + ++ RLC +G++ +A  L    +  G   +V  F+ L+ A+ KE  
Sbjct: 377 HEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGF 436

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
            E+A ++Y++M ++ LVP    ++ LI GL   GRL +   LL   + +G  +    F+ 
Sbjct: 437 DEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVG-TSFTI 495

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
            MD+Y   G+V  A++ +D M+  G  P+ I++S  I GLC+   + EA   F ++  R 
Sbjct: 496 YMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRG 555

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQ 443
             P+ +TY+SLI  FC+ G + +   L   M + GL PD                     
Sbjct: 556 FVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPD--------------------- 594

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                    +F  N L+DG C+  R     K F+ M    + PDV+T+  +I        
Sbjct: 595 ---------VFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQD 645

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +SSA++   +ML  G  PD+ TY+  +H L     ++  + M   +   G  P+   YN 
Sbjct: 646 MSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNT 705

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L++ +  +  LD A+ L G+L     +P+ +T N     +C
Sbjct: 706 LMDGICSDV-LDRAMILTGKLIKMAFQPNTVTVNVFFSHFC 745



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 198/426 (46%), Gaps = 7/426 (1%)

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++  L  G+   A  +   +   G  P++     +L+ L   G++  A  +F  +   GP
Sbjct: 147 LHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGP 206

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +P++  F+ +I  FC    +     L  +M   +++PD   Y+ILI G    G+  +  +
Sbjct: 207 RPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQ 266

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           LL    + G +  VV ++ +++     G++  A + +D M+  G   N I++++L+ G  
Sbjct: 267 LLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYA 326

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK---LRDGFSLYDNMIKRGLKP 421
           + GR+ EA     ++  R L P   T++ L  G  K GK   L  G      M    +  
Sbjct: 327 KAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISA 386

Query: 422 DA---VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           D+   VVC L  +G + DA +    ++   +  ++  FN L+    +       ++++ +
Sbjct: 387 DSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSV 446

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    + P   T   LI G+ +QG L  A LL   M+ +G      +++  +   F+  N
Sbjct: 447 MNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGT-SFTIYMDSYFRSGN 505

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   L  +  M + GV PD   ++  ++ L +  +++ A + F ++T RG  P+ ITYN+
Sbjct: 506 VEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNS 565

Query: 599 IICGYC 604
           +I  +C
Sbjct: 566 LISAFC 571



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 151/325 (46%), Gaps = 37/325 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L+  Y + G  ++++E+++ M+ +G+  S      L+  L +   +     L   M 
Sbjct: 424 FNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMI 483

Query: 175 GKGFCV---YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            KG+CV   +   M+   R G +E A      +++ G  P+ +  +  +  LC    +  
Sbjct: 484 CKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNE 543

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A   F  +   G  PN +T+++LI+AFC+   + +A +L   M +  L+PD+   +ILID
Sbjct: 544 AYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILID 603

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G  K GRL   N+  L   + GL  DVV ++++++AY G  D+  A+   ++ML  G  P
Sbjct: 604 GFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEP 663

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG-------------- 397
           ++ +Y+I +  LC    L  A  +  +++     P+ +TY++L+DG              
Sbjct: 664 DIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSDVLDRAMILTG 723

Query: 398 --------------------FCKSG 402
                               FCK G
Sbjct: 724 KLIKMAFQPNTVTVNVFFSHFCKQG 748



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 125/263 (47%), Gaps = 11/263 (4%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKL 169
           G  ++  +++Y R G ++ +++ +  M  +G+   PD +     +S L   + V + Y+ 
Sbjct: 490 GTSFTIYMDSYFRSGNVEGALKCWDDMVKVGV--QPDFIAFSAYISGLCRLDHVNEAYQA 547

Query: 170 CRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
              M G+GF      Y  L++   R G +  A  + +++ Q G +P++ T N ++   C 
Sbjct: 548 FVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCK 607

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            G++   +  F  +   G  P+VVT++T+INA+C    +  A    N M+     PD+  
Sbjct: 608 EGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFT 667

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV-GRAVQTYDRM 344
           Y+I +  L     L    ++L   +  G   + V ++++MD      DV  RA+    ++
Sbjct: 668 YNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICS--DVLDRAMILTGKL 725

Query: 345 LNGGFLPNVISYSILIKGLCQQG 367
           +   F PN ++ ++     C+QG
Sbjct: 726 IKMAFQPNTVTVNVFFSHFCKQG 748


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 249/533 (46%), Gaps = 45/533 (8%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S L+E   R GK+ ++ ++   +  +G   S  +   L++ L       +   L + M  
Sbjct: 335 SSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGE 394

Query: 176 KGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           KG C     Y  L++   R+G ++ A H   ++I  G    +   N ++   C  G +  
Sbjct: 395 KGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSA 454

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A S FD ++  G KP VV++++LI+ +C + KL +AF+LY+ M    + P+   ++ LI 
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            LF+A R+ +   L    L++ +  + V ++ +++ +   G+  +A +  ++M+  G +P
Sbjct: 515 ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVP 574

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  +Y  LI  LC  GR+ EA      +     + + + YS+L+ G+CK G+LRD   + 
Sbjct: 575 DTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVC 634

Query: 412 DNMIKRG-----------------------------------LKPDAVVCSLLINGL--- 433
             M+KRG                                   L+PD V+ + +I+G    
Sbjct: 635 REMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKA 694

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             +  A   +   +     PN+  + TL++  C+         L+  M + N  P+ +T+
Sbjct: 695 GSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTY 754

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
              +  +A +GS+  A+ L   MLK GL  + ++Y+ ++ G  K   +     +   M  
Sbjct: 755 CCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMID 813

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N + PD   Y+ ++    +  NLD A++ +  + ++GL+PD + YN +I G C
Sbjct: 814 NAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCC 866



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 216/407 (53%), Gaps = 5/407 (1%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++I+ GFVP     + +++ L   G++ +A  L + +  VG  P++  ++ LIN+ CK+ 
Sbjct: 321 EMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDG 380

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           K ++A  L+  M E  L  + + YSILID   + G+L      L   +  G+K+ V  ++
Sbjct: 381 KFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYN 440

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           S+++ +  +G++  AV  +D M++ G  P V+SY+ LI G C +G+L EA  L+ ++  +
Sbjct: 441 SLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGK 500

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----A 437
            + P+  T+++LI    ++ ++ D F L+D M+++ + P+ V  +++I G   +     A
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKA 560

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                Q V+  L+P+ + +  L+   C   R  +  K    +   + K + + ++ L+ G
Sbjct: 561 FELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHG 620

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
              +G L  A+ +  +M+KRG+  D++ Y+ +I G  K ++ S    + K M    + PD
Sbjct: 621 YCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPD 680

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             IY  +++   K  ++  A  ++  + D G  P+I+TY T+I   C
Sbjct: 681 KVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELC 727



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 235/493 (47%), Gaps = 7/493 (1%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF--CV 180
            +I ++D  + +F  +  MGI     +   ++    +  +  +  ++ + M        V
Sbjct: 204 AKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVV 263

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++GL +   +  A  +   +IQ+G   + VT   ++  LC   +    + + D ++
Sbjct: 264 YNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMI 323

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +G  P     S+L+    ++ K+  AF L N + ++  +P L +Y+ LI+ L K G+  
Sbjct: 324 ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFD 383

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   L     ++GL  + V +S ++D++   G +  A+    +M+  G    V  Y+ LI
Sbjct: 384 EAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLI 443

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ G L  A   F +++ + L+P++++Y+SLI G+C  GKL + F LY  M  +G+ 
Sbjct: 444 NGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIA 503

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+    + LI+ L     M DA R F + +   ++PN   +N +++G C+        +L
Sbjct: 504 PNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFEL 563

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M    + PD  T+  LI  + S G +  A      + +     + + YSA++HG  K
Sbjct: 564 LNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCK 623

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +   L + + M + GV  D+  Y VL++  IKE +  A   L   + D+ L PD + 
Sbjct: 624 EGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVI 683

Query: 596 YNTIICGYCSLNS 608
           Y ++I GY    S
Sbjct: 684 YTSMIDGYSKAGS 696



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 231/499 (46%), Gaps = 14/499 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+++ R GK+D ++     M   GI ++      L++      ++         M 
Sbjct: 404 YSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMI 463

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++G   KG +  AF ++ ++  +G  PN  T   ++  L    ++ 
Sbjct: 464 DKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMT 523

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  LFD +L     PN VT++ +I   CKE    KAF+L N M++  LVPD   Y  LI
Sbjct: 524 DAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLI 583

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L   GR+ E  + +        KL+ + +S+++  Y   G +  A+     M+  G  
Sbjct: 584 SSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVD 643

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +++ Y++LI G  ++       GL   +  +RL P  + Y+S+IDG+ K+G ++  F +
Sbjct: 644 MDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGI 703

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +D MI  G  P+ V  + LIN     GLM  A   + + +     PN   +   +D   R
Sbjct: 704 WDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAR 763

Query: 466 LKRATDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
                  V+L   ML G+     + +++ +L+RG    G +  A  L  +M+   + PD 
Sbjct: 764 EGSMEKAVQLHNDMLKGLL---ANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDC 820

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           ITYS II+   +  N+   +  +  M   G+ PD   YN L+        L  A +L   
Sbjct: 821 ITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDD 880

Query: 584 LTDRGLEPDIITYNTIICG 602
           +  RG++P+  T+ ++  G
Sbjct: 881 MIRRGVKPNQATHKSLSHG 899



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 216/436 (49%), Gaps = 10/436 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  Y   GK+ E+  ++  M+  GI  +      L+S L  +N +   ++L   M 
Sbjct: 474 YTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEML 533

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  ++ G  ++G    AF +  Q++Q+G VP+  T   ++  LC  G++ 
Sbjct: 534 EQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVC 593

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A    D L     K N + +S L++ +CKE +L  A  +   M++  +  DL+ Y++LI
Sbjct: 594 EAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLI 653

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  K         LL    D+ L+ D V+++S++D Y   G V +A   +D M++ G  
Sbjct: 654 DGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCT 713

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN+++Y+ LI  LC+ G + +A  L+ ++L+    P+ +TY   +D   + G +     L
Sbjct: 714 PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +++M+K GL  + V  ++L+ G      + +A +   + +   + P+   ++T++  CCR
Sbjct: 774 HNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR 832

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                  ++ +  M    +KPD + +  LI G    G L  A  L   M++RG+ P+  T
Sbjct: 833 RGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQAT 892

Query: 526 YSAIIHGLFKGKNISV 541
           + ++ HG  +  +IS 
Sbjct: 893 HKSLSHGASRKFSIST 908


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 233/494 (47%), Gaps = 34/494 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L++   R  ++  +V +   MS  G+         LM   V+  S+    ++   M 
Sbjct: 92  FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 151

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G    +     L+NG  + G +E+A    +Q I  GF P+ +T N  +  LC N  +G
Sbjct: 152 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 211

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  + DV++  G  P+V T++ ++N  CK  +LE+A  + N M++   +PD+  ++ LI
Sbjct: 212 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 271

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L    RL+E  +L      +G+  DV  F+ +++A   +GD   A++ ++ M N G  
Sbjct: 272 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 331

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y+ LI  LC  G+L +A  L   +       S +TY+++IDG CK  ++ +   +
Sbjct: 332 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 391

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +D M  +G+  +A+  + LI+GL                              C+ K+  
Sbjct: 392 FDQMDLQGISRNAITFNTLIDGL------------------------------CKDKKID 421

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D  +L   M    ++P+ IT+  ++     QG +  A  +   M   G   DV+TY  +I
Sbjct: 422 DAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLI 481

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +GL K     V L + + M   G+ P    YN +L  L +  N+  AL LF ++ + G  
Sbjct: 482 NGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 541

Query: 591 PDIITYNTIICGYC 604
           PD +TY  +  G C
Sbjct: 542 PDALTYKIVFRGLC 555



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 216/431 (50%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  L+N L+    ++    ++ ++  RG  P++VT N ++K LC   Q+  A  + + +
Sbjct: 56  VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 115

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+  TF+TL+  F +E  +E A ++   M+EM      +  ++LI+G  K GR+
Sbjct: 116 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 175

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++    +   +  G + D + +++ ++       VG A++  D M+  G  P+V +Y+I+
Sbjct: 176 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 235

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  LC+ G+L EA G+  Q++ R   P + T+++LI   C   +L +   L   +  +G+
Sbjct: 236 VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 295

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    ++LIN L  +GD   ALR F +       P+   +NTL+D  C L +    + 
Sbjct: 296 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 355

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M         IT+  +I G+  +  +  A  +F QM  +G++ + IT++ +I GL 
Sbjct: 356 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 415

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K I     +   M   G+ P+   YN +L    K+ ++  A  +   +T  G E D++
Sbjct: 416 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 475

Query: 595 TYNTIICGYCS 605
           TY T+I G C 
Sbjct: 476 TYGTLINGLCK 486



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 194/403 (48%), Gaps = 5/403 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   + V  N +L  L    ++    S++  +   G KP+VVTF+TL+ A C+  ++  A
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             +   M    + PD   ++ L+ G  + G ++    +    L+ G     V  + +++ 
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y  +G V  A+    + +  GF P+ I+Y+  + GLCQ   +  A  +   ++    +P 
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           + TY+ +++  CK+G+L +   + + M+ RG  PD    + LI  L     + +AL    
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           Q     + P+++ FN L++  C++      ++LF  M      PD +T+  LI  + S G
Sbjct: 289 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 348

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A+ L   M   G     ITY+ II GL K   I     +F  M+  G++ +   +N
Sbjct: 349 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 408

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            L++ L K+  +D A +L  Q+   GL+P+ ITYN+I+  YC 
Sbjct: 409 TLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 451



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 184/370 (49%), Gaps = 5/370 (1%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L G + + V ++ L+N   + +K++    +Y+ M    + PD++ ++ L+  L +A +++
Sbjct: 47  LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 106

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               +L     RG+  D   F+++M  +V  G +  A++   RML  G     ++ ++LI
Sbjct: 107 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 166

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ GR+ +A G   Q +    EP  +TY++ ++G C++  +     + D M++ G  
Sbjct: 167 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226

Query: 421 PDA-----VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD      VV  L  NG + +A     Q V    +P++  FNTL+   C   R  + + L
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              + +  + PDV T  +LI  +   G    A+ LF +M   G TPD +TY+ +I  L  
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +   L + K ME  G       YN +++ L K+  ++ A ++F Q+  +G+  + IT
Sbjct: 347 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 406

Query: 596 YNTIICGYCS 605
           +NT+I G C 
Sbjct: 407 FNTLIDGLCK 416



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 3/152 (1%)

Query: 471 DTVKLFM--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
           D V L +  L  ++ I+ D + +  L+  +     +     ++ +M  RG+ PDV+T++ 
Sbjct: 35  DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 94

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++  L +   +   + M + M   GVAPD   +  L+   ++E +++AAL++  ++ + G
Sbjct: 95  LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 154

Query: 589 LEPDIITYNTIICGYCSLNSCLID-GYFKSQI 619
                +T N +I GYC L       GY + +I
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEI 186


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 249/489 (50%), Gaps = 11/489 (2%)

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDL-VQRLMSCLVDSNSVGQYYKLCRAMRGKGFC---- 179
           I  +D++V  F ++  M  +  P     +++S LV  N         + M  KG      
Sbjct: 30  IDNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMF 89

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+N       +  AF M  ++++ G+ P+ VT N +L+ LC+NG++  A +  D +
Sbjct: 90  TFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHV 149

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV-PDLIIYSILIDGLFKAGR 298
           +      + V++ TLIN  CK  +   A QL   +  + LV PD+I+Y+ +ID   K   
Sbjct: 150 IRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKL 209

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + +  +L    + + +  +VV F+S++  +  +G +  AV   + M      PNV +++I
Sbjct: 210 VIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNI 269

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI GLC++G + +A  +   ++ + +EP+++TY+SL+DG+    ++     +++ +  RG
Sbjct: 270 LIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRG 329

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           + P+    S++INGL     + +A++ F +     + PN   +++L+DG C+  R +D  
Sbjct: 330 VTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVW 389

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   +       ++IT+  L+ G+     +  AI L  +M   G+ PD+ TY+ ++ GL
Sbjct: 390 DLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGL 449

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K   +     +++ +   G   +I +Y V++N L KE   D AL L  Q+ D G  PD 
Sbjct: 450 CKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDA 509

Query: 594 ITYNTIICG 602
           +TY T+I  
Sbjct: 510 VTYETLISA 518



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 211/410 (51%), Gaps = 35/410 (8%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFV---PNIVTCNKILKRLCINGQIGNASSLFD 237
           Y  L+NGL + G    A  + R++   G +   P+++    I+   C +  + +A  L+ 
Sbjct: 161 YGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYS 218

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +++    PNVVTF++LI  FC   +L++A  L N M   ++ P++  ++ILIDGL K G
Sbjct: 219 EMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEG 278

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            +K+   +L   + +G++ +VV ++S+MD Y  + +V +A   ++ +   G  PNV SYS
Sbjct: 279 EVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYS 338

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           ++I GLC+   + EA  LF ++ ++ + P+ +TYSSLIDG CKSG++ D + L D +  R
Sbjct: 339 VMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNR 398

Query: 418 GLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
           G +P                              N+  +N+L++G C+  +    + L  
Sbjct: 399 G-QP-----------------------------ANIITYNSLLNGLCKNHQVDKAIALLT 428

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I+PD+ T+T L+ G+   G L  A  ++  +L +G   ++  Y+ +I+GL K  
Sbjct: 429 KMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEG 488

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
                L +   ME NG  PD   Y  L++ L K      A+KL  ++  R
Sbjct: 489 FFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 219/433 (50%), Gaps = 43/433 (9%)

Query: 180 VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL---KRLCINGQIGNASS 234
           ++EF  +++ L++    + A    +Q+  +G  P + T N ++     LC   Q+  A S
Sbjct: 53  IFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLC---QLNFAFS 109

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +L +G +P+ VT +TL+   C   K+++A   ++ ++      D + Y  LI+GL 
Sbjct: 110 MVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLC 169

Query: 295 KAGRLKEGNELLLTALDRGLKL---DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           K+G  +   +LL      GL L   DV+++++++D++     V  A   Y  M+     P
Sbjct: 170 KSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYP 227

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV++++ LI G C  G+L EA GL  ++ +  + P++ T++ LIDG CK G+++   S+ 
Sbjct: 228 NVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVL 287

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             MIK+G++P+ V                               + +LMDG   +K    
Sbjct: 288 SVMIKQGVEPNVVT------------------------------YTSLMDGYFLVKEVNK 317

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              +F  + +  + P+V +++V+I G+     +  A+ LF +M  + +TP+ +TYS++I 
Sbjct: 318 AKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLID 377

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL K   IS    +   +   G   +I  YN LLN L K   +D A+ L  ++ D G++P
Sbjct: 378 GLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQP 437

Query: 592 DIITYNTIICGYC 604
           D+ TY T++ G C
Sbjct: 438 DMSTYTTLVDGLC 450



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 200/429 (46%), Gaps = 35/429 (8%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG-----KGFCV 180
           GK+ E++    ++     +L       L++ L  S       +L R + G         +
Sbjct: 137 GKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIM 196

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  +++   +  ++ +A+ ++ ++I +   PN+VT N ++   CI GQ+  A  L + + 
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS 256

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L    PNV TF+ LI+  CKE +++KA  + ++M++  + P+++ Y+ L+DG F    + 
Sbjct: 257 LNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN 316

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +   +  T   RG+  +V  +S +++       V  AV+ +  M      PN ++YS LI
Sbjct: 317 KAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLI 376

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC+ GR+ +   L  ++  R    +++TY+SL++G CK+ ++    +L   M   G++
Sbjct: 377 DGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQ 436

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           PD                              +  + TL+DG C+  R  D  +++  + 
Sbjct: 437 PD------------------------------MSTYTTLVDGLCKNGRLKDAQRIYQDLL 466

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                 ++  +TV+I G+  +G    A+ L  QM   G  PD +TY  +I  LFK     
Sbjct: 467 CKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNG 526

Query: 541 VGLHMFKLM 549
             + + + M
Sbjct: 527 KAVKLLREM 535



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 186/350 (53%), Gaps = 11/350 (3%)

Query: 264 LEKAFQLYNLMMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           L+ A   +N ++ M+   P +  ++ ++  L K    K           +G++ ++  F+
Sbjct: 33  LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            +++ +  +  +  A     ++L  G+ P+ ++ + L++GLC  G++ EA      V+ +
Sbjct: 93  ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL---KPDAVVCSLLING-----LM 434
           R     ++Y +LI+G CKSG+ R    L   +   GL   +PD ++ + +I+      L+
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLV 210

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            DA   + + +   + PN+  FN+L+ G C + +  + V L   M + N+ P+V T  +L
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNIL 270

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+  +G +  A  +   M+K+G+ P+V+TY++++ G F  K ++   H+F  +   GV
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            P++  Y+V++N L K   +D A+KLF ++  + + P+ +TY+++I G C
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLC 380



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 140/275 (50%), Gaps = 8/275 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSC--LVDSNSVGQYYKLC 170
           ++ LI+   + G++ ++  + + M   G+   P++V    LM    LV   +  ++    
Sbjct: 267 FNILIDGLCKEGEVKKATSVLSVMIKQGV--EPNVVTYTSLMDGYFLVKEVNKAKHVFNT 324

Query: 171 RAMRG--KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            ++RG       Y  ++NGL +  +++ A  + +++  +   PN VT + ++  LC +G+
Sbjct: 325 ISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGR 384

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +   L D +   G   N++T+++L+N  CK  +++KA  L   M +  + PD+  Y+ 
Sbjct: 385 ISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTT 444

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+DGL K GRLK+   +    L +G  L++ +++ +++     G    A+    +M + G
Sbjct: 445 LVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNG 504

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
            +P+ ++Y  LI  L +  +  +A  L  +++ R 
Sbjct: 505 CMPDAVTYETLISALFKNNKNGKAVKLLREMIARE 539



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 7/185 (3%)

Query: 434 MGDALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
           + DA+  F   + M    P +F FN ++    ++      +     M +  I+P++ T  
Sbjct: 33  LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           +LI   +    L+ A  +  ++LK G  PD +T + ++ GL     +   L+    + R 
Sbjct: 93  ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL---EPDIITYNTIICGYCSLNSC 609
               D   Y  L+N L K     AAL+L  ++   GL    PD+I Y  II  +C  +  
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCK-DKL 209

Query: 610 LIDGY 614
           +ID Y
Sbjct: 210 VIDAY 214


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 224/432 (51%), Gaps = 6/432 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++G  + G ++ AF M  ++ ++   PNI+T N +L  LC   ++  A SL   +
Sbjct: 248 TYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM 307

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            + G  P+  T+S L +   +      A +LY    E  +  +    SIL++GL K G++
Sbjct: 308 EVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKV 367

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++  E+L    + GL  D V++++ ++ Y  IGD+ +A+ T +RM + G  PN I+++ L
Sbjct: 368 EKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSL 427

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I   C    + +A     ++  + + PS+ TY++LIDG+ K       F + + M + G+
Sbjct: 428 IDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGV 487

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLI-----PNLFIFNTLMDGCCRLKRATDTVK 474
           KP+ V    LIN L  D      + V   +I     PN  ++N L+DG C + +  D ++
Sbjct: 488 KPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALR 547

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
            F  M    I P ++T+ VLI G+  +G L+ A     Q+   G +PDVITY+++I G  
Sbjct: 548 FFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYA 607

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
              N+S  L +++ M+  G+ P +  Y+ L++   KE  ++   KL+ ++    L PD +
Sbjct: 608 NAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKE-GIELVEKLYNEMLQMNLLPDRV 666

Query: 595 TYNTIICGYCSL 606
            YN +I  Y  +
Sbjct: 667 VYNAMIHCYAEI 678



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 236/503 (46%), Gaps = 14/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ Y ++G++D + ++   M +  +  +P+++    L+S L     + +   L + 
Sbjct: 249 YNTLIDGYCKVGELDAAFKMRERMKEKSV--APNIITFNSLLSGLCKMRKMKEARSLLKE 306

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   GF      Y  L +GLLR      A  ++ Q  ++G   N  T + +L  LC  G+
Sbjct: 307 MEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGK 366

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +       G   + V ++T +N +C+   + KA      M    L P+ I ++ 
Sbjct: 367 VEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNS 426

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID       + +  E +    ++G+   V  +++++D Y  +    R  Q  ++M   G
Sbjct: 427 LIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIG 486

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV+SY  LI  LC+ G+++EA  +   ++ R + P+   Y+ LIDG C  GK++D  
Sbjct: 487 VKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDAL 546

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
             +D M++  + P  V  ++LI+GL     + +A  F  Q       P++  +N+L+ G 
Sbjct: 547 RFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGY 606

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
                 +  + L+  M    IKP V T+  LI G + +G +     L+ +ML+  L PD 
Sbjct: 607 ANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDR 665

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + Y+A+IH   +  N      + + M   G+ PD   YN L+    +E  L     L   
Sbjct: 666 VVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNN 725

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           +  + L P   TY+ ++ G+C L
Sbjct: 726 MKAKELAPKADTYDILVKGHCDL 748



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 235/485 (48%), Gaps = 9/485 (1%)

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
           E+VE++ +M   G   S   +  L SCLV+     +   L   +   GF    F+    +
Sbjct: 124 EAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAI 183

Query: 190 RKGVIENAFHMHRQVI----QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           +  V      M  + +    +RG  PN+   N ++  LC   +I +A  +FD +  +   
Sbjct: 184 QAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLV 243

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
            ++VT++TLI+ +CK  +L+ AF++   M E  + P++I ++ L+ GL K  ++KE   L
Sbjct: 244 GSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSL 303

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L      G   D   +S + D  +   D   A++ Y++    G   N  + SIL+ GLC+
Sbjct: 304 LKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCK 363

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           QG++ +A  +  +     L    + Y++ ++G+C+ G +       + M   GL+P+++ 
Sbjct: 364 QGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSIT 423

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            + LI+       M  A  +  +     + P++  +NTL+DG  +L       ++   M 
Sbjct: 424 FNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME 483

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              +KP+V+++  LI  +   G +  A ++   M+ RG+ P+   Y+ +I G      + 
Sbjct: 484 EIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVK 543

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             L  F  M R+ ++P +  YNVL++ L K+  L  A     Q+T  G  PD+ITYN++I
Sbjct: 544 DALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603

Query: 601 CGYCS 605
            GY +
Sbjct: 604 SGYAN 608



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 227/486 (46%), Gaps = 8/486 (1%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G  YS L +  +R    + ++E++   ++ GI ++      L++ L     V +  ++ +
Sbjct: 316 GYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILK 375

Query: 172 AMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                G      +Y   +NG  R G +  A     ++   G  PN +T N ++ + C   
Sbjct: 376 KFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMK 435

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A      +   G  P+V T++TLI+ + K    ++ FQ+   M E+ + P+++ Y 
Sbjct: 436 EMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYG 495

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI+ L K G++ E   +L   + RG+  +  V++ ++D    +G V  A++ +D M+  
Sbjct: 496 SLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRS 555

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              P +++Y++LI GLC++G+L EA     Q+      P ++TY+SLI G+  +G +   
Sbjct: 556 EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKC 615

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDAL----RFFFQSVRMTLIPNLFIFNTLMDGC 463
             LY+ M   G+KP       LI+G   + +    + + + ++M L+P+  ++N ++   
Sbjct: 616 LGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCY 675

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
             +        L   M    I PD +T+  LI G   +G LS+   L   M  + L P  
Sbjct: 676 AEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKA 735

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY  ++ G    K+ S     ++ M  N   P+ +I N L   L +E  L     +  +
Sbjct: 736 DTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSE 795

Query: 584 LTDRGL 589
           +  +G+
Sbjct: 796 MNVKGI 801



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 187/374 (50%), Gaps = 9/374 (2%)

Query: 246 PNVVTFST-LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           P  +T S  L++  CK   L +A +LY  M     +P L+  S+L   L    +  +  +
Sbjct: 103 PLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVD 162

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           L +   + G + D  +++  + A V + ++   ++  D M   G  PNV  Y++LI GLC
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           ++ R+ +A  +F ++    L  S++TY++LIDG+CK G+L   F + + M ++ + P+ +
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + L++GL     M +A     +      +P+ + ++ L DG  R       ++L+   
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               I+ +  T ++L+ G+  QG +  A  +  +  + GL  D + Y+  ++G  +  ++
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +  +   + ME  G+ P+   +N L++       +D A +   ++ ++G+ P + TYNT+
Sbjct: 403 NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTL 462

Query: 600 ICGY---CSLNSCL 610
           I GY   C+ + C 
Sbjct: 463 IDGYGKLCTFDRCF 476


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 256/537 (47%), Gaps = 51/537 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPD--LVQRLMSCLVDSNSVGQYYKLCR 171
           Y+ LI    R G ++E+   F +  DM  Y L PD      L++ L  S    +   L  
Sbjct: 260 YNVLIAGLCRSGAVEEA---FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 316

Query: 172 AMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M          VY  L++G +R+G  + AF M ++++  G  PN +T + +++ LC  G
Sbjct: 317 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 376

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           Q+  AS L   ++    +P+ +T++ +I    +    + AF+L + M    + P++  YS
Sbjct: 377 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYS 436

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I+I GL ++G  ++ ++LL     +GLK +  V++ ++  Y   G+V  A + +D+M   
Sbjct: 437 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV 496

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
             LP++  Y+ LI GL + GR+ E+   F Q+  R L P+  TYS LI G+ K+G L   
Sbjct: 497 NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA 556

Query: 408 FSLYDNMIKRGLKPDAVVC---------------------SLLINGLMGD---------- 436
             L   M+  GLKP+ V+                      S+L  G+M D          
Sbjct: 557 EQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHN 616

Query: 437 ---------ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                    A R      +   +P++ ++++L+ G C+         +   M    + P+
Sbjct: 617 LSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 676

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           ++ +  LI G+   G +S A  +F  +L +GL P+ +TY+++I G  K  +IS   +++ 
Sbjct: 677 IVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYN 736

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            M   G+ PD  +Y+VL        +L+ A+ L  ++  RG    I ++N ++ G+C
Sbjct: 737 EMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFC 792



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 216/446 (48%), Gaps = 9/446 (2%)

Query: 168 KLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
           K+   MR +G       Y  L+ GL R G +E AF   + +   G VP+  T   ++  L
Sbjct: 243 KVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGL 302

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C + +   A +L D +     KPNVV ++ LI+ F +E   ++AF++   M+   + P+ 
Sbjct: 303 CKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNK 362

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           I Y  L+ GL K G++   + LL   +    + D + ++ +++ +        A +    
Sbjct: 363 ITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSE 422

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M N G  PNV +YSI+I GLCQ G   +A  L  ++  + L+P+   Y+ LI G+C+ G 
Sbjct: 423 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 482

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           +     ++D M K  + PD    + LI GL     + ++ ++F Q     L+PN F ++ 
Sbjct: 483 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 542

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+ G  +        +L   M    +KP+ + +  L+        +      F  ML +G
Sbjct: 543 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 602

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           +  D   Y  +IH L    N+     +   +E+NG  PD+ +Y+ L++ L K  + + A 
Sbjct: 603 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 662

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYC 604
            +  +++ +G++P+I+ YN +I G C
Sbjct: 663 GILDEMSKKGVDPNIVCYNALIDGLC 688



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 157/588 (26%), Positives = 259/588 (44%), Gaps = 74/588 (12%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N I+    + ++   A +      N   SPN+   + +IH L QS   + AS + ++M  
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 460

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +  K   F              Y+ LI  Y R G +  + EIF  M+ + +   PDL   
Sbjct: 461 KGLKPNAFV-------------YAPLISGYCREGNVSLACEIFDKMTKVNVL--PDL--- 502

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                                    +C Y  L+ GL + G +E +     Q+ +RG +PN
Sbjct: 503 -------------------------YC-YNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 536

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
             T + ++     NG + +A  L   +L  G KPN V +  L+ ++ K   +EK    + 
Sbjct: 537 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 596

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M++  ++ D  IY ILI  L  +G ++    +L      G   DV V+SS++       
Sbjct: 597 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTA 656

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           D  +A    D M   G  PN++ Y+ LI GLC+ G +  A  +F  +L + L P+ +TY+
Sbjct: 657 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 716

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLI 450
           SLIDG CK G + + F LY+ M+  G+ PDA V S+L  G    GD  +  F    M L 
Sbjct: 717 SLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 776

Query: 451 PNLFI--FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
            +  I  FN L+DG C+  +  +T+KL  ++    + P+ +T   +I G++  G LS   
Sbjct: 777 GHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 836

Query: 509 L-------------------LFFQMLKRGLTP-DVITYSAIIHGLFKGKNISVGLHMFKL 548
                               LF  M+ +G  P DV+    +I    K  N+   L +  +
Sbjct: 837 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDV 894

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG-LEPDIIT 595
           +         + Y  +++ L ++  L  AL L  ++  RG L+P ++ 
Sbjct: 895 IVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 942



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 169/376 (44%), Gaps = 51/376 (13%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           N VT++ LI   C+   +E+AF     M +  LVPD   Y  LI+GL K+ R  E   LL
Sbjct: 256 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 315

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
                                              D M      PNV+ Y+ LI G  ++
Sbjct: 316 -----------------------------------DEMSCAELKPNVVVYANLIDGFMRE 340

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G   EA  +  +++   ++P+ +TY +L+ G CK G++     L   M++   +PD +  
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400

Query: 427 SLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           +L+I G        DA R   +     + PN++ ++ ++ G C+         L   M  
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 460

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             +KP+   +  LI G   +G++S A  +F +M K  + PD+  Y+++I GL K   +  
Sbjct: 461 KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEE 520

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
               F  M+  G+ P+   Y+ L++  +K  +L++A +L  ++ D GL+P+ + Y     
Sbjct: 521 STKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID--- 577

Query: 602 GYCSLNSCLIDGYFKS 617
                   L++ YFKS
Sbjct: 578 --------LLESYFKS 585



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 5/285 (1%)

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           S ++AY  + +   A +    M   G   N ++Y++LI GLC+ G + EA G    +   
Sbjct: 227 SALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY 286

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDA 437
            L P   TY +LI+G CKS +  +  +L D M    LKP+ VV + LI+G M      +A
Sbjct: 287 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 346

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            +   + V   + PN   ++ L+ G C++ +      L   M   + +PD IT+ ++I G
Sbjct: 347 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEG 406

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
                S   A  L  +M   G++P+V TYS +IHGL +         + + M   G+ P+
Sbjct: 407 HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 466

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +Y  L++   +E N+  A ++F ++T   + PD+  YN++I G
Sbjct: 467 AFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFG 511



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 116/269 (43%), Gaps = 42/269 (15%)

Query: 378 QVLIRRLEPSLLT--YSSLID-----------------------------------GFCK 400
            VL R +E S     + S ++                                   G C+
Sbjct: 210 SVLQRAVEGSAARGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 269

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
           SG + + F    +M   GL PD      LINGL       +A     +     L PN+ +
Sbjct: 270 SGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV 329

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +  L+DG  R   A +  K+   M    ++P+ IT+  L+RG+   G +  A LL  QM+
Sbjct: 330 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 389

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           +    PD ITY+ II G F+  +      +   ME  G++P++  Y+++++ L +    +
Sbjct: 390 RDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 449

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            A  L  ++T +GL+P+   Y  +I GYC
Sbjct: 450 KASDLLEEMTTKGLKPNAFVYAPLISGYC 478


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 222/411 (54%), Gaps = 5/411 (1%)

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
           H+ +++   G   N +T N ++   C   QI +A S+F  +L +G +P+++T++TLI   
Sbjct: 70  HLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGL 129

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C   +++++   ++ ++   +  D + Y  LI+GL K G+      LL        + DV
Sbjct: 130 CLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDV 189

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           V++++++D       V  A   Y  M      PNV++Y+ LI G C  G+L +A GL  +
Sbjct: 190 VMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNE 249

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM---- 434
           ++++ + P++ T+++L+DG CK GK+R+  SL   M+K G+ PD    + L++G      
Sbjct: 250 MVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKE 309

Query: 435 -GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
            G A   F    +M +  ++  ++ ++ G  ++K   + + LF  M   N+ PDV+ ++ 
Sbjct: 310 AGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSS 369

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI G+   G ++SA+    +M  RG  P+VITY+++I  L K   +   + + K ++  G
Sbjct: 370 LIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQG 429

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  ++  YN+L++ L K+  L  A K+F  L  +G   D++TY+ +I G C
Sbjct: 430 IQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLC 480



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 211/399 (52%), Gaps = 5/399 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P I+   KIL  L           LF  + L G + N +T + LIN++C   ++  AF +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           +  ++++   PD+I Y+ LI GL   G++KE        + +G+KLD V + ++++    
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
           IG  G A++   ++      P+V+ Y+ +I GLC+   + +A  L+ ++  +R+ P+++T
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           Y+SLI GFC  G+L   F L + M+ + + P+    + L++GL     M +A       +
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +  + P++F +N LMDG   +K A     +F +M    +  DV +++V+I G++    L 
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLD 346

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ LF  M    + PDV+ YS++I GL K   I+  L     M   G  P++  Y  L+
Sbjct: 347 EAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLI 406

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + L K   +D A+ L  ++ D+G++ ++ TYN ++ G C
Sbjct: 407 DALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLC 445



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 148/571 (25%), Positives = 261/571 (45%), Gaps = 65/571 (11%)

Query: 23  SKTHISDL-QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRD 81
           S TH   L   N A      +++   P P I+F              +++  L+++    
Sbjct: 20  SHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKF-------------GKILGSLVKTKHYP 66

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           +  H+F +M +  G   N+  L            + LI +Y  + +I+ +  +FA +  +
Sbjct: 67  IVIHLFQRMELH-GIQSNYITL------------NILINSYCHLRQINSAFSVFAKILKL 113

Query: 142 GIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIE 195
           G    PD++    L+  L  +  V +       +  +G  +    Y  L+NGL + G   
Sbjct: 114 G--YQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTG 171

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  + R++      P++V  N I+  LC +  + +A  L+  +      PNVVT+++LI
Sbjct: 172 PALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLI 231

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
             FC   +L+KAF L N M+  ++ P++  ++ L+DGL K G+++E   L+   +  G+ 
Sbjct: 232 YGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVG 291

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            DV  ++++MD Y  + + G+A   ++ M   G   +V SYS++I GL +   L EA  L
Sbjct: 292 PDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDL 351

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
           F  +    + P ++ YSSLIDG CKSG++       D M  RG +P              
Sbjct: 352 FEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRG-QP-------------- 396

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
                          PN+  + +L+D  C+  +    + L   +    I+ ++ T+ +L+
Sbjct: 397 ---------------PNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILV 441

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G+   G L+ A  +F  +L +G   DV+TYS +I+GL K       L +   ME  G  
Sbjct: 442 DGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCV 501

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           PD   Y  ++N   ++   D A KL  ++ D
Sbjct: 502 PDAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 179/355 (50%), Gaps = 8/355 (2%)

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L  A   +N M+ M   P +I +  ++  L K         L       G++ + +  + 
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++++Y  +  +  A   + ++L  G+ P++I+Y+ LI+GLC  G++ E+     +++ + 
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           ++   ++Y +LI+G CK G+      L   +     +PD V+ + +I+GL     + DA 
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             + +     + PN+  + +L+ G C + +      L   M + N+ P+V T   L+ G+
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
             +G +  A  L   M+K G+ PDV TY+A++ G F  K      ++F +M + GV  D+
Sbjct: 270 CKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDV 329

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS---LNSCL 610
             Y+V+++ L K   LD A+ LF  + +  + PD++ Y+++I G C    +NS L
Sbjct: 330 HSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSAL 384


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 235/497 (47%), Gaps = 14/497 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +I +Y R G  +++++ F  M D  +  +  +   ++  L+D N       +   M+  G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L+  L +   ++ A  +  ++  +G  P+ V+   ++  LC  G++  A 
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L      +   P+V  ++ LIN  CKE   E+AFQL + MM   + P++I Y+ +I+ L
Sbjct: 237 EL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
             AG ++    +L     RG   ++  F+S++  +   G    A+  +DRM+  G +PNV
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNV 351

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ L+ GLC +  L +A  +F Q+ I    P++ TYS+LIDG+ K+G L     +++ 
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 414 MIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           MI  G  P+ V  + ++     N +   A             PN   FNT + G C   R
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               +K+F  MG     P+  T+  L+  +        A  L   M  RG+  +++TY+ 
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNT 531

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           II+G      +   L +   M   G  PD    N++++   K+  ++ A++L  +L+   
Sbjct: 532 IIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK 591

Query: 589 LEPDIITYNTIICGYCS 605
             PDII Y ++I G C+
Sbjct: 592 WHPDIIAYTSLISGICT 608



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/474 (23%), Positives = 198/474 (41%), Gaps = 80/474 (16%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            + F    +T   ++++L    ++     L   + L G   +   F ++I ++ +    E
Sbjct: 69  SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSE 128

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A + +  M +  + P + IY+ ++D L    R +  N +       G++ +V  ++ ++
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
            A      V  A +    M + G  P+ +SY+ LI  LC+ G++ EA     + L     
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----RELAMSFT 243

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG---------- 435
           PS+  Y++LI+G CK     + F L D M+ +G+ P+ +  + +IN L            
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303

Query: 436 ------------------------------DALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
                                         +AL F+ + +R  ++PN+  +N LM G C 
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            +   D V +F  M +    P+V T++ LI G A  G L  A  ++  M+  G  P+V+ 
Sbjct: 364 KRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVA 423

Query: 526 YSAI-----------------------------------IHGLFKGKNISVGLHMFKLME 550
           Y+ +                                   I GL     +   + +F  M 
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMG 483

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +G  P+   YN LL+ L+K+     A  L   +  RG+E +++TYNTII GYC
Sbjct: 484 NSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC 537



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 152/326 (46%), Gaps = 4/326 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI+ +   G   E+++ +  M   G+  +      LM  L    S+G    +   M 
Sbjct: 319 FTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME 378

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G C     Y  L++G  + G ++ A  +   +I  G  PN+V    ++  LC N    
Sbjct: 379 INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFN 438

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L + + +    PN VTF+T I   C   +++ A ++++ M      P+   Y+ L+
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELL 498

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L K  R  E   L+     RG++L++V +++++  Y   G +G A++   +M+  G  
Sbjct: 499 DSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ I+ +I+I   C+QG++  A  L  ++   +  P ++ Y+SLI G C    + +    
Sbjct: 559 PDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVY 618

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD 436
              M+  G+ P+    ++L+  L  +
Sbjct: 619 LRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/381 (20%), Positives = 160/381 (41%), Gaps = 46/381 (12%)

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAK-LEKAFQLYNLMMEMDLVPDL----------IIYS 287
           +L   P PN+   +   ++  KEA  L++    +++ + ++    +          + Y 
Sbjct: 21  VLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQ 80

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ++I+ L     +     LL      G+     +F SV+ +Y   G   +A++T+ RM + 
Sbjct: 81  MMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDF 140

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              P V  Y+ ++  L  + R      ++  +    +EP++ TY+ L+   CK+ ++   
Sbjct: 141 RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGA 200

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             L   M  +G  PD V                               + TL+   C+L 
Sbjct: 201 HKLLVEMSSKGCDPDEVS------------------------------YTTLISSLCKLG 230

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  +  +L M     +  P V  +  LI G+  + +   A  L  +M+ +G+ P+VI+Y+
Sbjct: 231 KVKEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYT 285

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            II+ L    N+ + L +   M   G +P++  +  L+     +     AL  + ++   
Sbjct: 286 TIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE 345

Query: 588 GLEPDIITYNTIICGYCSLNS 608
           G+ P+++ YN ++ G CS  S
Sbjct: 346 GVVPNVVAYNALMHGLCSKRS 366



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 6/156 (3%)

Query: 465 RLKRATD-TVKLFMLMGMYN---IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           RLK   D T+ L     + N    K   +T+ ++I  +AS+  +     L  QM   G++
Sbjct: 49  RLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGIS 108

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
                + ++I    +  +    L  F  M+   V P + IYN +L+ L+ E        +
Sbjct: 109 CSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPI 168

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
           +  +   G+EP++ TYN ++   C  N   +DG  K
Sbjct: 169 YSNMKKDGMEPNVFTYNILLKALCKNNR--VDGAHK 202


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 155/589 (26%), Positives = 267/589 (45%), Gaps = 27/589 (4%)

Query: 32  FNQANAILANLIKTNNPTPAIQFFK--WTHNCVSSPNIA---QLIHVLLQSDMRDVASHV 86
           ++ ANA+L  LI      P+   F   W    V  P       L   L++  M + AS  
Sbjct: 148 YSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASEC 207

Query: 87  FDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLS 146
           F KM           R FR       C+   L+    ++G+ D S + F  M   GI  S
Sbjct: 208 FLKM-----------RKFRVFPKPRSCNA--LLHRLSKVGRGDLSRKFFKDMGAAGIKRS 254

Query: 147 PDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHR 202
                 ++  L     +     L   M+  GF      Y  L++G  + G+++    +  
Sbjct: 255 VFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFE 314

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           Q+      P+++T N ++   C   ++  A      +   G KPNVVT+ST I+AFCKE 
Sbjct: 315 QMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEG 374

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L++A + +  M  + L P+   Y+ LID   KAG L E  +L+   L  G+KL+VV ++
Sbjct: 375 MLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYT 434

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++D     G +  A + +  MLN G  PN  +Y+ L+ G  +   +  A  +  ++  +
Sbjct: 435 ALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 494

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDA 437
            ++P LL Y +++ G C   +L +   L   + + G+  +AV+ + L++     G   +A
Sbjct: 495 CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEA 554

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           L    + + + LI     +  L+DG C+     + +  F  M    ++P+V  +T L+ G
Sbjct: 555 LTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDG 614

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +        A  LF +ML +G+ PD I Y+A+I G  K  N+   L++   M   G+  D
Sbjct: 615 LCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELD 674

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +  Y  L+  L     +  A  L  ++  +G+ PD + Y  +I  Y +L
Sbjct: 675 LHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYAL 723



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 213/439 (48%), Gaps = 6/439 (1%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           GF V++ L + L+  G++E A     ++ +    P   +CN +L RL   G+   +   F
Sbjct: 184 GFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFF 243

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             +   G K +V T++ +I+  CKE  LE A  L+  M E    PD++ Y+ LIDG  K 
Sbjct: 244 KDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKL 303

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G L E   +     D     DV+ ++++++ +     + +A +    M   G  PNV++Y
Sbjct: 304 GLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY 363

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           S  I   C++G L EA   F  +    L P+  TY+SLID  CK+G L +   L + +++
Sbjct: 364 STFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ 423

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G+K + V  + L++GL     M +A   F   +   + PN   +  L+ G  + K    
Sbjct: 424 AGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEY 483

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              +   M    IKPD++ +  ++ G+ ++  L  A LL  ++ + G+  + + Y+ ++ 
Sbjct: 484 AKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMD 543

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             FK    +  L + + M   G+      Y  L++ L K   +  A+  FG++++ GL+P
Sbjct: 544 AYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQP 603

Query: 592 DIITYNTIICGYCSLNSCL 610
           ++  Y  ++ G C  N+C 
Sbjct: 604 NVAVYTALVDGLCK-NNCF 621



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/490 (23%), Positives = 217/490 (44%), Gaps = 73/490 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ + ++G +DE + IF  M D      PD++    L++C      + + ++    
Sbjct: 293 YNSLIDGHGKLGLLDECICIFEQMKDADC--DPDVITYNALINCFCKFERMPKAFEFLHE 350

Query: 173 MRGKG--------------FC-------------------------VYEFLMNGLLRKGV 193
           M+  G              FC                          Y  L++   + G 
Sbjct: 351 MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 410

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +  A  +  +++Q G   N+VT   +L  LC  G++  A  +F  +L  G  PN  T++ 
Sbjct: 411 LAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTA 470

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L++ F K  ++E A  +   M E  + PDL++Y  ++ GL    RL+E   L+    + G
Sbjct: 471 LVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG 530

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  + V+++++MDAY   G    A+   + ML+ G +   ++Y  LI GLC+ G + EA 
Sbjct: 531 INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAM 590

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             FG++    L+P++  Y++L+DG CK+        L+D M+ +G+ PD +  + LI+G 
Sbjct: 591 HHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGN 650

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           M                               L+ A +     + +GM   + D+  +T 
Sbjct: 651 MKHG---------------------------NLQEALNLRDRMIEIGM---ELDLHAYTA 680

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI G++  G +  A  L  +M+ +G+ PD + Y  +I   +    +   L +   M + G
Sbjct: 681 LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740

Query: 554 VAPDIAIYNV 563
           +   ++ + V
Sbjct: 741 MITGLSDHAV 750



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 20/330 (6%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
            A+L  L +      A + F+   N   +PN      L+H  +++   + A  +  +M  
Sbjct: 434 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 493

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +  K      L+   L    C+ S L E  + IG+I ES          GI  +  +   
Sbjct: 494 KCIKPD--LLLYGTILWGL-CNESRLEEAKLLIGEIKES----------GINTNAVIYTT 540

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRG 208
           LM     S    +   L   M   G    E     L++GL + G+++ A H   ++ + G
Sbjct: 541 LMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG 600

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN+     ++  LC N     A  LFD +L  G  P+ + ++ LI+   K   L++A 
Sbjct: 601 LQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL 660

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            L + M+E+ +  DL  Y+ LI GL  +G++++   LL   + +G+  D VV+  ++  Y
Sbjct: 661 NLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY 720

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
             +G V  A++  + M   G +  +  +++
Sbjct: 721 YALGKVDEALELQNEMAKRGMITGLSDHAV 750


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 215/421 (51%), Gaps = 5/421 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL + G    A  +   ++ RG  P+  T   I+  LC  G+   A+ LF  +
Sbjct: 47  TFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKM 106

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G + NVVT+STLI++ CK  ++ +A  +++ M   D+ P +  Y+ LI GL    R 
Sbjct: 107 EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRW 166

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE + LL       +  +VV F+ ++D +   G V  A      M   G  P+V++Y+ L
Sbjct: 167 KEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSL 226

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G      +VEA  LF  ++ +  +P + +YS LI+G+CK+ ++ +   L++ MI +G 
Sbjct: 227 MYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGS 286

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ V  + LI+GL     + +A   F        +PNL+ +  L+DG C+        +
Sbjct: 287 TPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFR 346

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M    +KP+++ + +L+  +   G+L  A  LF ++   GL P+V  Y+ II+GL 
Sbjct: 347 LFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLC 406

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +   L  F+ ME +G  PD   YNV++   ++  +   A+ L G++ DRG   D  
Sbjct: 407 KEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAG 466

Query: 595 T 595
           T
Sbjct: 467 T 467



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 214/430 (49%), Gaps = 5/430 (1%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C    L+N   +   ++  F +  + I+ G  P IVT   ++  L   G+   A  LFD 
Sbjct: 11  CTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDD 70

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           ++  G +P+  T++T+IN  CK  +   A  L+  M E     +++ YS LI  L K  R
Sbjct: 71  MVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRR 130

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + E  ++      + +   +  ++S++           A    + M +   +PNV+++++
Sbjct: 131 VNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNV 190

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+   C++G+++ A G+   +    +EP ++TY+SL+ G+    ++ +   L+D MI +G
Sbjct: 191 LVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKG 250

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
            KPD    S+LING      + +A + F + +     PN   +NTL+ G C+L R  +  
Sbjct: 251 CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQ 310

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            LF  M      P++ T+ +L+ G   QG L  A  LF  M    L P+++ Y+ +++ +
Sbjct: 311 DLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAM 370

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K  N+     +F  +   G+ P++ IY  ++N L KE  LD AL+ F  + D G  PD 
Sbjct: 371 CKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDE 430

Query: 594 ITYNTIICGY 603
            +YN II G+
Sbjct: 431 FSYNVIIRGF 440



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 203/402 (50%), Gaps = 5/402 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  PN  T N ++   C   ++    S+    + +G +P +VTF+TLIN   K  K  +A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +L++ M+     PD   Y+ +I+GL K G       L     + G +L+VV +S+++ +
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                 V  A+  +  M      P + +Y+ LI+GLC   R  EA  L  ++    + P+
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++T++ L+D FCK GK+     +   M + G++PD V  + L+ G      + +A + F 
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             +     P++F ++ L++G C+ KR  +  +LF  M      P+ +++  LI G+   G
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A  LF  M   G  P++ TY+ ++ G  K   +     +F+ M+   + P++ +YN
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYN 364

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +L+N + K  NL  A +LF +L   GL+P++  Y TII G C
Sbjct: 365 ILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLC 406



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 190/369 (51%), Gaps = 5/369 (1%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L G  PN  T + LIN FC+  +++  F +    +++ L P ++ ++ LI+GL K G+  
Sbjct: 3   LAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFA 62

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +  EL    + RG + D   ++++++    IG+   A   + +M   G   NV++YS LI
Sbjct: 63  QAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLI 122

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC+  R+ EA  +F  +  + + P++ TY+SLI G C   + ++  +L + M    + 
Sbjct: 123 HSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIM 182

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLI-----PNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  ++L++    +      + V  T+      P++  +N+LM G        +  KL
Sbjct: 183 PNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKL 242

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F +M     KPDV ++++LI G      +  A  LF +M+ +G TP+ ++Y+ +IHGL +
Sbjct: 243 FDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQ 302

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +     +FK M  NG  P++  Y +LL+   K+  L  A +LF  +    L+P+++ 
Sbjct: 303 LGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 362

Query: 596 YNTIICGYC 604
           YN ++   C
Sbjct: 363 YNILVNAMC 371



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 204/420 (48%), Gaps = 9/420 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGI----YLSPDLVQRLMSCLVDSNSVGQYYKLC 170
           ++ LI    ++GK  ++VE+F  M   G     Y    ++  L      + + G + K+ 
Sbjct: 48  FTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKME 107

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            A        Y  L++ L +   +  A  +   +  +   P I T   +++ LC   +  
Sbjct: 108 EAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWK 167

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS+L + +  +   PNVVTF+ L++ FCKE K+  A  +   M EM + PD++ Y+ L+
Sbjct: 168 EASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLM 227

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G      + E  +L    + +G K DV  +S +++ Y     +  A Q ++ M++ G  
Sbjct: 228 YGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGST 287

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN +SY+ LI GLCQ GRL EA  LF  +      P+L TY+ L+DGFCK G L   F L
Sbjct: 288 PNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRL 347

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M    LKP+ V+ ++L+N     G + DA   F +   + L PN+ I+ T+++G C+
Sbjct: 348 FRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCK 407

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                + ++ F  M      PD  ++ V+IRG       S A+ L  +M  RG   D  T
Sbjct: 408 EGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 137/264 (51%), Gaps = 5/264 (1%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P +++++ LI GL + G+  +A  LF  ++ R  +P   TY+++I+G CK G+    
Sbjct: 40  GLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALA 99

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+  M + G + + V  S LI+ L     + +AL  F       + P +F + +L+ G
Sbjct: 100 AGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQG 159

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C   R  +   L   M   NI P+V+T  VL+     +G + +A  +   M + G+ PD
Sbjct: 160 LCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPD 219

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V+TY+++++G      +     +F +M   G  PD+  Y++L+N   K   +D A +LF 
Sbjct: 220 VVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFN 279

Query: 583 QLTDRGLEPDIITYNTIICGYCSL 606
           ++  +G  P+ ++YNT+I G C L
Sbjct: 280 EMIHQGSTPNNVSYNTLIHGLCQL 303



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 82/159 (51%)

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           L PN    N L++  C+L+R      +        ++P ++T T LI G+   G  + A+
Sbjct: 6   LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            LF  M+ RG  PD  TY+ II+GL K    ++   +FK ME  G   ++  Y+ L++ L
Sbjct: 66  ELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSL 125

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            K   ++ AL +F  +  + + P I TY ++I G C+ +
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFS 164



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 4/144 (2%)

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M +  + P+  T  +LI        +     +  + +K GL P ++T++ +I+GL K   
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
            +  + +F  M   G  PD   Y  ++N L K      A  LF ++ + G + +++TY+T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 599 II---CGYCSLNSCL-IDGYFKSQ 618
           +I   C Y  +N  L I  Y K++
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAK 144


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 235/497 (47%), Gaps = 14/497 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +I +Y R G  +++++ F  M D  +  +  +   ++  L+D N       +   M+  G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L+  L +   ++ A  +  ++  +G  P+ V+   ++  LC  G++  A 
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L      +   P+V  ++ LIN  CKE   E+AFQL + MM   + P++I Y+ +I+ L
Sbjct: 237 EL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
             AG ++    +L     RG   ++  F+S++  +   G    A+  +DRM+  G +PNV
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNV 351

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ L+ GLC +  L +A  +F Q+ I    P++ TYS+LIDG+ K+G L     +++ 
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 414 MIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           MI  G  P+ V  + ++     N +   A             PN   FNT + G C   R
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               +K+F  MG     P+  T+  L+  +        A  L   M  RG+  +++TY+ 
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNT 531

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           II+G      +   L +   M   G  PD    N++++   K+  ++ A++L  +L+   
Sbjct: 532 IIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK 591

Query: 589 LEPDIITYNTIICGYCS 605
             PDII Y ++I G C+
Sbjct: 592 WHPDIIAYTSLISGICT 608



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/474 (23%), Positives = 198/474 (41%), Gaps = 80/474 (16%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            + F    +T   ++++L    ++     L   + L G   +   F ++I ++ +    E
Sbjct: 69  SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSE 128

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A + +  M +  + P + IY+ ++D L    R +  N +       G++ +V  ++ ++
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
            A      V  A +    M + G  P+ +SY+ LI  LC+ G++ EA     + L     
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----RELAMSFT 243

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG---------- 435
           PS+  Y++LI+G CK     + F L D M+ +G+ P+ +  + +IN L            
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303

Query: 436 ------------------------------DALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
                                         +AL F+ + +R  ++PN+  +N LM G C 
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            +   D V +F  M +    P+V T++ LI G A  G L  A  ++  M+  G  P+V+ 
Sbjct: 364 KRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVA 423

Query: 526 YSAI-----------------------------------IHGLFKGKNISVGLHMFKLME 550
           Y+ +                                   I GL     +   + +F  M 
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMG 483

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +G  P+   YN LL+ L+K+     A  L   +  RG+E +++TYNTII GYC
Sbjct: 484 NSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC 537



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 152/326 (46%), Gaps = 4/326 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI+ +   G   E+++ +  M   G+  +      LM  L    S+G    +   M 
Sbjct: 319 FTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME 378

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G C     Y  L++G  + G ++ A  +   +I  G  PN+V    ++  LC N    
Sbjct: 379 INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFN 438

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L + + +    PN VTF+T I   C   +++ A ++++ M      P+   Y+ L+
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELL 498

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L K  R  E   L+     RG++L++V +++++  Y   G +G A++   +M+  G  
Sbjct: 499 DSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ I+ +I+I   C+QG++  A  L  ++   +  P ++ Y+SLI G C    + +    
Sbjct: 559 PDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVY 618

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD 436
              M+  G+ P+    ++L+  L  +
Sbjct: 619 LRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/381 (20%), Positives = 160/381 (41%), Gaps = 46/381 (12%)

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAK-LEKAFQLYNLMMEMDLVPDL----------IIYS 287
           +L   P PN+   +   ++  KEA  L++    +++ + ++    +          + Y 
Sbjct: 21  VLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQ 80

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ++I+ L     +     LL      G+     +F SV+ +Y   G   +A++T+ RM + 
Sbjct: 81  MMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDF 140

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              P V  Y+ ++  L  + R      ++  +    +EP++ TY+ L+   CK+ ++   
Sbjct: 141 RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGA 200

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             L   M  +G  PD V                               + TL+   C+L 
Sbjct: 201 HKLLVEMSSKGCDPDEVS------------------------------YTTLISSLCKLG 230

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  +  +L M     +  P V  +  LI G+  + +   A  L  +M+ +G+ P+VI+Y+
Sbjct: 231 KVKEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYT 285

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            II+ L    N+ + L +   M   G +P++  +  L+     +     AL  + ++   
Sbjct: 286 TIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE 345

Query: 588 GLEPDIITYNTIICGYCSLNS 608
           G+ P+++ YN ++ G CS  S
Sbjct: 346 GVVPNVVAYNALMHGLCSKRS 366



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 6/156 (3%)

Query: 465 RLKRATD-TVKLFMLMGMYN---IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           RLK   D T+ L     + N    K   +T+ ++I  +AS+  +     L  QM   G++
Sbjct: 49  RLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGIS 108

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
                + ++I    +  +    L  F  M+   V P + IYN +L+ L+ E        +
Sbjct: 109 CSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPI 168

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
           +  +   G+EP++ TYN ++   C  N   +DG  K
Sbjct: 169 YSNMKKDGMEPNVFTYNILLKALCKNNR--VDGAHK 202


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 228/492 (46%), Gaps = 79/492 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS ++    + G++D++ E+   + + G+ L+                            
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLN---------------------------- 107

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQ-RGFVPNIVTCNKILKRLCINGQIGNAS 233
                 Y  +++G  +   +++A  + + +    G VP++VT N +LK LC   ++  A 
Sbjct: 108 ---VITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAF 164

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            LF+ +   G +PNV+++STL++  CK  +L++A +L+  M+E   VPDL+ Y+  + GL
Sbjct: 165 VLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGL 224

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI-GDVGRAVQTYDRMLNGGFLPN 352
            KA R+ E  +     + +G K D V FS+V    +GI    G A +  ++M        
Sbjct: 225 CKANRVAEACDCCRKMVTKGSKADAVAFSTV----IGILCKKGHAEEAQNQM-------- 272

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
                  I+ LC+ G L EAC  F +++ R   PS   +++LI   CKS +L DG  L+ 
Sbjct: 273 -------IEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQ 325

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            M                      +++ F+        PNL  +N ++D  C+ K+  + 
Sbjct: 326 RM---------------------KSMKEFY------CPPNLETYNIMVDNLCKAKQLDEA 358

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            +L   M  Y + PDV+T++ L+ G+   G L  A  L  +M K G+ PD  T ++I++ 
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K   +   L   + M+  G  PD+  YN LL+ L K   +D A+    ++      PD
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478

Query: 593 IITYNTIICGYC 604
           + +Y  II   C
Sbjct: 479 VFSYTIIITALC 490



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 204/440 (46%), Gaps = 62/440 (14%)

Query: 227 GQIGNASSLFDVL-LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           G+I     LFD L    G + +V T++  ++A  K    + A++ +  M      PD   
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           YSI++ GL KAG L +  ELL    + G+KL+V+ +S V+D       V  A++ +  M 
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 346 NGGFL------------------------------------PNVISYSILIKGLCQQGRL 369
           +GG                                      PNVISYS L+ GLC+ GRL
Sbjct: 136 SGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EAC L+ +++ +   P L+ Y+S + G CK+ ++ +       M+ +G K DAV  S +
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255

Query: 430 I----------------------NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           I                      +G++ +A + F + +     P+  +FNTL+   C+ K
Sbjct: 256 IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315

Query: 468 RATDTVKLFMLMGM---YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           R  D V LF  M     +   P++ T+ +++  +     L  A  L  +M   GL+PDV+
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVV 375

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TYSA++ GL K   +     + + M + GV PD      +LN L K   +D AL     +
Sbjct: 376 TYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETM 435

Query: 585 TDRGLEPDIITYNTIICGYC 604
             RG  PD++TYNT++ G C
Sbjct: 436 KARGSTPDLVTYNTLLDGLC 455



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 208/440 (47%), Gaps = 36/440 (8%)

Query: 101 FRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RL 153
           F LF + +   GC+     YS L++   + G++DE+  ++  M +      PDLV     
Sbjct: 164 FVLF-EYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV--PDLVAYTSF 220

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKG--------------FC-------VYEFLMNGLLRKG 192
           ++ L  +N V +    CR M  KG               C           ++  L R G
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG 280

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP---KPNVV 249
           +++ A     ++I R   P+    N ++  +C + ++ +   LF  +  +      PN+ 
Sbjct: 281 MLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           T++ +++  CK  +L++A +L N M    L PD++ YS L+DGL K G+L    +LL   
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
              G+  D    +S+++A    G V  A+   + M   G  P++++Y+ L+ GLC+ GR+
Sbjct: 401 SKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRI 460

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA     +++  +  P + +Y+ +I   C+SG+     +++  M+KRG+ PD V+   L
Sbjct: 461 DEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSL 520

Query: 430 INGLMGDALR-FFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           ++GL  + L     + ++ +L  P+  +   ++DG C+  +A D  ++   M       D
Sbjct: 521 LDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPAD 580

Query: 488 VITHTVLIRGIASQGSLSSA 507
             T+  ++ G+   G +  A
Sbjct: 581 AFTYISVVSGLRKLGKVDKA 600



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 163/370 (44%), Gaps = 59/370 (15%)

Query: 69  QLIHVLLQSDMRDVASHVFDKM------------------VIQFGKTYNFFRLFR--DSL 108
           Q+I  L +S M D A   F++M                  V +  +  +   LF+   S+
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330

Query: 109 GDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
            +F C      Y+ +++N  +  ++DE+ E+   M++ G  LSPD+V             
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG--LSPDVV------------- 375

Query: 164 GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
                            Y  L++GL + G ++ A  +  ++ + G  P+  T   IL  L
Sbjct: 376 ----------------TYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL 419

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
              G++  A S  + +   G  P++VT++TL++  CK  ++++A      M+     PD+
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDV 479

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
             Y+I+I  L ++G+    + +    + RG+  D V++ S++D     G    A++    
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT 539

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
            L     P+ + + +++ GLC+ G+  +AC +  ++          TY S++ G  K GK
Sbjct: 540 SL---CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGK 596

Query: 404 LRDGFSLYDN 413
           +     L D+
Sbjct: 597 VDKARQLVDD 606



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 1/172 (0%)

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A   F Q  R    P+ F ++ ++ G C+        +L   +    +K +VIT++V+I 
Sbjct: 57  AYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVID 116

Query: 497 GIASQGSLSSAILLFFQMLKRG-LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           G      +  A+ +F  M   G   PDV+T+++++ GL  G+ +S    +F+ M + G  
Sbjct: 117 GCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCE 176

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           P++  Y+ LL+ L K   LD A +L+ ++ ++   PD++ Y + + G C  N
Sbjct: 177 PNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKAN 228



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 10/128 (7%)

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-LKRGLTPDVITYSAIIHGLFKG 536
           ++G Y +  +V+ H          G +S+ + LF  +  ++G    V TY+  +  L K 
Sbjct: 1   MLGRYTVVGEVLRHL---------GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKA 51

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
               +    F+ M+R G  PD   Y+++L  L K   LD A +L GQL + G++ ++ITY
Sbjct: 52  NAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITY 111

Query: 597 NTIICGYC 604
           + +I G C
Sbjct: 112 SVVIDGCC 119


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 228/465 (49%), Gaps = 43/465 (9%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++  L R+G   +A     +V+     P  V+   +++ LC   + G A  L   + 
Sbjct: 81  YNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQ 140

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G +P+VVT+ TLI   C  A ++KA +L   M E  + P++++YS L+ G  KAGR +
Sbjct: 141 ASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWE 200

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
             +++      RG++ DVV+++ ++D+    G V +A Q  D+M+  G  PNV++Y++LI
Sbjct: 201 CVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLI 260

Query: 361 KGLCQQGRLVEACGLFGQVLIR-------------------------------------R 383
             +C++G + EA  L   +L +                                      
Sbjct: 261 NSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETM 320

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDAL 438
           +EP+++T++S+I G CK+G++R  F + D M + G   + V  +LLI GL+       A+
Sbjct: 321 VEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAM 380

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
               +     L P+ F ++ L++G C++ +      L   M    I+P+++ +  L+  +
Sbjct: 381 ELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAAL 440

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
             QG +  A   FF  + +    DV+ YS +IHG  + ++        K M   G+ PD 
Sbjct: 441 CEQGMMEQA-RNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDS 499

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             Y++L+NM     +L AA ++  Q+T  G  PD+  ++++I GY
Sbjct: 500 VTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGY 544



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 212/404 (52%), Gaps = 8/404 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           V + V+ N +L  LC  G   +A+     ++    +P  V+++TL+ A C E +  +A  
Sbjct: 75  VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L   M    + PD++ Y  LI GL  A  + +  ELL    + G++ +VVV+S ++  Y 
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G      + ++ M   G  P+V+ Y+ LI  LC++G++ +A  +  +++ R LEP+++
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQS 444
           TY+ LI+  CK G +++  SL +NM+++G+  DAV  + LI GL G     +A+    + 
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314

Query: 445 VR-MTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +   T++ PN+  FN+++ G C+  R     ++  +M       +++T  +LI G+    
Sbjct: 315 IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVH 374

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A+ L  +M   GL PD  TYS +I+G  K   +     +   M R+G+ P++  Y 
Sbjct: 375 KVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYI 434

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            LL  L ++  ++ A   F ++  +  + D++ Y+T+I G C L
Sbjct: 435 PLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRL 477



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 226/458 (49%), Gaps = 12/458 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           LM  L      GQ   L R M+  G       Y  L+ GL     ++ A  + R++ + G
Sbjct: 119 LMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG 178

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN+V  + +L+  C  G+    S +F+ +   G +P+VV ++ LI++ C+E K++KA 
Sbjct: 179 IEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKAT 238

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           Q+ + MME  L P+++ Y++LI+ + K G +KE   L    L++G+ LD V +++++   
Sbjct: 239 QVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298

Query: 329 VGIGDVGRAVQTYDRMLNGGFL--PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            G+ ++  A+   + M++G  +  PNV++++ +I GLC+ GR+ +A  +   +       
Sbjct: 299 SGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCAC 358

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           +L+T++ LI G  +  K++    L D M   GL+PD+   S+LING      +  A    
Sbjct: 359 NLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLL 418

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +  R  + P L  +  L+   C           F  M   N K DV+ ++ +I G    
Sbjct: 419 SKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRL 477

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
               SA      ML  GL PD +TYS +I+      ++     + K M  +G  PD+A++
Sbjct: 478 RDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVF 537

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           + L+     + + +  L+L  ++T + +  D    +TI
Sbjct: 538 DSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTI 575



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 226/468 (48%), Gaps = 16/468 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+       +  ++V +   M   G+   PD+V    L+  L D+  V +  +L R 
Sbjct: 116 YTTLMRALCAERRTGQAVGLLRDMQASGV--RPDVVTYGTLIRGLCDAADVDKAVELLRE 173

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G      VY  L+ G  + G  E    +  ++  RG  P++V    ++  LC  G+
Sbjct: 174 MCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGK 233

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A+ + D ++  G +PNVVT++ LIN+ CKE  +++A  L N M+E  +  D + Y+ 
Sbjct: 234 VKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNT 293

Query: 289 LIDGLFKAGRLKEGNELLLTAL--DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           LI GL     + E   LL   +  +  ++ +VV F+SV+      G + +A Q  D M  
Sbjct: 294 LITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAE 353

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G   N++++++LI GL +  ++ +A  L  ++    LEP   TYS LI+GFCK  ++  
Sbjct: 354 NGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDR 413

Query: 407 GFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
             SL   M + G++P+ V     + +L   G+M  A R FF  +      ++  ++T++ 
Sbjct: 414 AESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQA-RNFFDEMHKNCKLDVVAYSTMIH 472

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G CRL+      +    M    + PD +T+++LI   A+ G L +A  +  QM   G  P
Sbjct: 473 GACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVP 532

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           DV  + ++I G     +    L + + M    +A D  I + +   L+
Sbjct: 533 DVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLV 580



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 174/341 (51%), Gaps = 7/341 (2%)

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
           L+  +  V D + Y+ ++  L + G   +    LL  +    +   V ++++M A     
Sbjct: 68  LLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAER 127

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
             G+AV     M   G  P+V++Y  LI+GLC    + +A  L  ++    +EP+++ YS
Sbjct: 128 RTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYS 187

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRM 447
            L+ G+CK+G+      +++ M  RG++PD V+ + LI+     G +  A +   + +  
Sbjct: 188 CLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMER 247

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            L PN+  +N L++  C+     + + L   M    +  D +T+  LI G++    +  A
Sbjct: 248 GLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEA 307

Query: 508 ILLFFQML--KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           + L  +M+  +  + P+V+T++++IHGL K   +     +  +M  NG A ++  +N+L+
Sbjct: 308 MGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLI 367

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             L++   +  A++L  ++   GLEPD  TY+ +I G+C +
Sbjct: 368 GGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKM 408



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 96/194 (49%)

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           ++  +  + V+ +L   G   DA  F  + +     P    + TLM   C  +R    V 
Sbjct: 75  VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M    ++PDV+T+  LIRG+     +  A+ L  +M + G+ P+V+ YS ++ G  
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K         +F+ M   G+ PD+ +Y  L++ L +E  +  A ++  ++ +RGLEP+++
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254

Query: 595 TYNTIICGYCSLNS 608
           TYN +I   C   S
Sbjct: 255 TYNVLINSMCKEGS 268



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 167/376 (44%), Gaps = 49/376 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI++  R GK+ ++ ++   M + G  L P++V    L++ +    SV +   L   
Sbjct: 221 YTGLIDSLCREGKVKKATQVMDKMMERG--LEPNVVTYNVLINSMCKEGSVKEAMSLRNN 278

Query: 173 MRGKGFCV----YEFLMNGLLRKGVIE--NAFHMHRQVI--QRGFVPNIVTCNKILKRLC 224
           M  KG  +    Y  L+ GL   GV+E   A  +  ++I  +    PN+VT N ++  LC
Sbjct: 279 MLEKGVALDAVTYNTLITGL--SGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLC 336

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G++  A  + D++   G   N+VTF+ LI    +  K++KA +L + M    L PD  
Sbjct: 337 KTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSF 396

Query: 285 IYSILIDGLFKAGRLKEGNELL------------------LTAL-DRGL----------- 314
            YSILI+G  K  ++     LL                  L AL ++G+           
Sbjct: 397 TYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM 456

Query: 315 ----KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
               KLDVV +S+++     + D   A +    ML+ G +P+ ++YS+LI      G L 
Sbjct: 457 HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLG 516

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
            A  +  Q+      P +  + SLI G+   G       L   M  + +  D+ + S + 
Sbjct: 517 AAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIY 576

Query: 431 NGLMG-DALRFFFQSV 445
             L+  +  +   QSV
Sbjct: 577 TCLVANNEGKALLQSV 592


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 231/437 (52%), Gaps = 7/437 (1%)

Query: 175 GKGFCVYE--FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G GF +Y    L+  L +  ++E A ++++Q++  G  P+++T N ++  L   G++  A
Sbjct: 158 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 217

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             +   +      P+V T+++LI   C+   L+ AF +++ M++    P+ + YS LI+G
Sbjct: 218 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 277

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L   GR+ E  ++L   +++G++  V  ++  + A   I     A++   RM   G  PN
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V +Y+ LI GL + G+L  A GL+ ++L   L P+ +TY++LI+  C  G+      ++ 
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397

Query: 413 NMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M   G   +    + +I GL   GD   A+  F + ++M  +P +  +NTL++G     
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
              +  +L  LM     +PD  T+  L+ G +  G L SA   F +M++ GL P+ ++Y+
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           A+I G  K   + + L + K ME  G  P++  YN ++N L KE     A K+  ++ ++
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577

Query: 588 GLEPDIITYNTIICGYC 604
           GL P++ITY T+I G C
Sbjct: 578 GLLPNVITYTTLIDGLC 594



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 259/563 (46%), Gaps = 67/563 (11%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIF 135
           D+A  VFD+MV +                  GCD     YS LI      G++DE++++ 
Sbjct: 250 DLAFGVFDRMVKE------------------GCDPNSVTYSTLINGLCNEGRVDEALDML 291

Query: 136 AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRK 191
             M + GI  +       ++ L       +  +L   M+ +G       Y  L++GL R 
Sbjct: 292 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 351

Query: 192 GVIENAFHMHRQVIQRGFVPNIVT--------C--------------------------- 216
           G +E A  ++ ++++ G VPN VT        C                           
Sbjct: 352 GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 411

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N+I+K LC+ G I  A  LF+ +L +GP P VVT++TLIN +  +  +  A +L +LM E
Sbjct: 412 NEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 471

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
               PD   Y+ L+ G  K G+L+  +      ++ GL  + V +++++D +   G V  
Sbjct: 472 NGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDI 531

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+    RM   G  PNV SY+ +I GL ++ R  EA  +  +++ + L P+++TY++LID
Sbjct: 532 ALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLID 591

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI---PNL 453
           G C++G+ +  F ++ +M KR   P+    S LI GL  +      ++ RM+ I   P L
Sbjct: 592 GLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA--DEAERMSEIGCEPTL 649

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             ++TL+ G CR  R  +  +L   M      PD   +  L+        +  A+ +F  
Sbjct: 650 DTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHS 709

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           +  +G    +  Y A+I  L K   +     +F  M       D  ++ VL++ L+KE  
Sbjct: 710 IEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGE 769

Query: 574 LDAALKLFGQLTDRGLEPDIITY 596
           LD  +KL   +  +   P+I TY
Sbjct: 770 LDLCMKLLHIMESKNFTPNIQTY 792



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 205/431 (47%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+N L +KG +  A  +  Q+ Q    P++ T   ++   C N  +  A  +FD +
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PN VT+STLIN  C E ++++A  +   M+E  + P +  Y++ I  L      
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E  EL+     RG + +V  +++++     +G +  A+  Y +ML  G +PN ++Y+ L
Sbjct: 320 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC  GR   A  +F  +       +  TY+ +I G C  G +     L++ M+K G 
Sbjct: 380 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439

Query: 420 KPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P  V  + LING +      +A R           P+ + +N L+ G  +  +      
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
            F  M    + P+ +++T LI G +  G +  A+ L  +M + G  P+V +Y+A+I+GL 
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K    S    +   M   G+ P++  Y  L++ L +      A K+F  +  R   P++ 
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619

Query: 595 TYNTIICGYCS 605
           TY+++I G C 
Sbjct: 620 TYSSLIYGLCQ 630



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 188/396 (47%), Gaps = 40/396 (10%)

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           +TL+    K   +E A  LY  M+   + P L+ ++ LI+ L K G+++E   +L     
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
             L  DV  ++S++  +    ++  A   +DRM+  G  PN ++YS LI GLC +GR+ E
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  +  +++ + +EP++ TY+  I   C      +   L   M KRG +P+    + LI+
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           GL     +  A+  + + ++  L+PN   +N L++  C   R +  +K+F  M  +    
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +  T+  +I+G+   G +  A++LF +MLK G  P V+TY+ +I+G     N++    + 
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 547 KLMERNGVAPDIAIYNVLLNMLIK---------------ECNL----------------- 574
            LM+ NG  PD   YN L++   K               EC L                 
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526

Query: 575 ---DAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
              D AL L  ++ + G  P++ +YN +I G    N
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKEN 562



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 160/375 (42%), Gaps = 68/375 (18%)

Query: 37  AILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGK 96
           A L +L+K N   P     +WT+N        +L+    +    + AS  F +MV     
Sbjct: 463 ARLLDLMKENGCEPD----EWTYN--------ELVSGFSKWGKLESASFYFQEMV----- 505

Query: 97  TYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
                      L      Y+ LI+ + + GK+D ++ +   M +MG   + +    +++ 
Sbjct: 506 --------ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVING 557

Query: 157 LVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           L   N   +  K+C  M  +G       Y  L++GL R G  + AF +   + +R  +PN
Sbjct: 558 LSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPN 617

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           + T + ++  LC  G+   A  + ++    G +P + T+STL++  C++ +  +A QL  
Sbjct: 618 LYTYSSLIYGLCQEGKADEAERMSEI----GCEPTLDTYSTLVSGLCRKGRFYEAEQLVK 673

Query: 273 LMMEMDLVPD-----------------------------------LIIYSILIDGLFKAG 297
            M E    PD                                   L IY  LI  L KAG
Sbjct: 674 DMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAG 733

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           +++E   L    L++    D +V++ ++D  +  G++   ++    M +  F PN+ +Y 
Sbjct: 734 QVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYV 793

Query: 358 ILIKGLCQQGRLVEA 372
           IL + L + G+ +E+
Sbjct: 794 ILGRELSRIGKSIES 808



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 121/285 (42%), Gaps = 35/285 (12%)

Query: 51  AIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQ-------------- 93
           A+   K       +PN+     +I+ L + +    A  + DKMV Q              
Sbjct: 532 ALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLID 591

Query: 94  ----FGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
                G+T   F++F D +    C      YS LI    + GK DE+      MS++G  
Sbjct: 592 GLCRNGRTQFAFKIFHD-MEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCE 646

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHM 200
            + D    L+S L       +  +L + M+ +GFC    +Y  L+    +   +++A  +
Sbjct: 647 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 706

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
              +  +GF  ++     ++  LC  GQ+  A +LFD +L      + + ++ L++   K
Sbjct: 707 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 766

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           E +L+   +L ++M   +  P++  Y IL   L + G+  E   L
Sbjct: 767 EGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPL 811


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/593 (24%), Positives = 282/593 (47%), Gaps = 54/593 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N ++    K  +   A   FK        P++   + ++H L ++   D A     +MV 
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +     N+              Y+ LI  Y   G+  E+V +F  M    I   PD+V  
Sbjct: 285 KGVLPDNW-------------TYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL--PDVVAL 329

Query: 151 QRLMSCLVDSNSVGQYYKL--CRAMRGKGFCV--YEFLMNGLLRKGVIENAFHMHRQVIQ 206
             LM  L     + +   +    AM+G+   V  Y  ++NG   KG + +   +   ++ 
Sbjct: 330 NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P I T N ++K     G +  A  +F+ +   G KP+VVT+ T+I A C+  K++ 
Sbjct: 390 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A + +N M++  +VPD   Y  LI G    G L +  EL+   ++ G++LD+V F S+++
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               +G V  A   +D  +N G  P+ + Y++L+ G C  G++ +A  +F  ++   +EP
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
           +++ Y +L++G+CK G++ +G SL+  M+++G+KP  ++ +++I+GL        F++ R
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL--------FEAGR 621

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              +P    F+ + +                      I  +  T+++++RG+        
Sbjct: 622 T--VPAKVKFHEMTES--------------------GIAMNKCTYSIVLRGLFKNRCFDE 659

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           AI LF ++    +  D+IT + +I G+F+ + +     +F  + R+G+ P    Y++++ 
Sbjct: 660 AIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMIT 719

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            LIKE  ++ A  +F  + + G EPD    N ++      N  +  G + S+I
Sbjct: 720 NLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 772



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 257/552 (46%), Gaps = 51/552 (9%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMS-DMGIYLSPDLVQR--LMSC 156
           F +L R  L       S L++ +    + DE+++I  + + ++G    PD+     L+  
Sbjct: 136 FGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCV--PDVFSYNILLKS 193

Query: 157 LVDSNSVGQYYKLCRAM-RGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
           L +    GQ   L R M  G   C      Y  +++G  ++G +  A  + ++++QRG  
Sbjct: 194 LCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 253

Query: 211 PNIVTCNKILKRLC-----------------------------------INGQIGNASSL 235
           P++VT + ++  LC                                     GQ   A  +
Sbjct: 254 PDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 313

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F  +      P+VV  +TL+ + CK  K+++A  +++ M      PD+  Y+I+++G   
Sbjct: 314 FKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYAT 373

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G L +  +L    L  G+   +  F+ ++ AY   G + +A+  ++ M + G  P+V++
Sbjct: 374 KGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVT 433

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  +I  LC+ G++ +A   F Q++ + + P    Y  LI GFC  G L     L   ++
Sbjct: 434 YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM 493

Query: 416 KRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G++ D V    +IN     G + DA   F  +V + L P+  ++N LMDG C + +  
Sbjct: 494 NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKME 553

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             +++F  M    I+P+V+ +  L+ G    G +   + LF +ML++G+ P  I Y+ II
Sbjct: 554 KALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII 613

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GLF+          F  M  +G+A +   Y+++L  L K    D A+ LF +L    ++
Sbjct: 614 DGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVK 673

Query: 591 PDIITYNTIICG 602
            DIIT NT+I G
Sbjct: 674 IDIITLNTMIAG 685



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 132/282 (46%), Gaps = 17/282 (6%)

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-----LEPSLLT 390
           R     DR LNG FL  +          C  G  + A  LF +   R      L P+  T
Sbjct: 60  RGTPVLDRDLNG-FLAALARAPS--SAACGSGPAL-AVALFNRAASRAQGPRVLSPTSYT 115

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF-QS 444
           Y+ L+D   ++ +     + +  +++ GL+ DA++ S L+ G        +AL     ++
Sbjct: 116 YAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRT 175

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVITHTVLIRGIASQG 502
             +  +P++F +N L+   C   ++     L  +M  G     PDV+ +  +I G   +G
Sbjct: 176 PELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEG 235

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            ++ A  LF +M++RG+ PD++TYS+++H L K + +       + M   GV PD   YN
Sbjct: 236 DVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYN 295

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L+           A+++F ++  + + PD++  NT++   C
Sbjct: 296 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLC 337



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 16/290 (5%)

Query: 337 AVQTYDRMLNGGFLPNVIS-----YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           AV  ++R  +    P V+S     Y+IL+    +  R   A   FGQ+L   L    +  
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151

Query: 392 SSLIDGFCKSGKLRDGFS-LYDNMIKRGLKPDAVVCSLLI--------NGLMGDALRFFF 442
           S L+ GFC++ +  +    L     + G  PD    ++L+        +G   D LR   
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA 211

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +       P++  +NT++DG  +         LF  M    I PD++T++ ++  +    
Sbjct: 212 EG-GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR 270

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++  A     QM+ +G+ PD  TY+ +I+G          + +FK M R  + PD+   N
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALN 330

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
            L+  L K   +  A  +F  +  +G  PD+ +Y  ++ GY +   CL+D
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYAT-KGCLVD 379



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 31/292 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ Y  +GK+++++ +F  M   GI               + N VG          
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGI---------------EPNVVG---------- 573

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+NG  + G I+    + R+++Q+G  P+ +  N I+  L   G+   A  
Sbjct: 574 ------YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            F  +   G   N  T+S ++    K    ++A  L+  +  M++  D+I  + +I G+F
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           +  R++E  +L  +    GL    V +S ++   +  G V  A   +  M N G  P+  
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 747

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
             + +++ L ++  +V A     ++  R      LT   L+D F   G  R+
Sbjct: 748 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 204/409 (49%), Gaps = 30/409 (7%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+NG+ + G    A  + R++  R   PN+   N I+  LC    +  A  LF  + 
Sbjct: 167 YGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 226

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G   +VVT++TLI  FC  +KL++A  L N M+   + P++  Y+IL+D L K G++K
Sbjct: 227 AKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   +L   L   +K DV+ +S++MD Y  + ++ +A   ++ M   G  P+V SY+ILI
Sbjct: 287 EAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILI 346

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+   + EA  LF ++  + + P ++TYSSLIDG CKSG++   + L D M  RG+ 
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIP 406

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
                                          N+  +N+L+DG C+       + LF  M 
Sbjct: 407 A------------------------------NVITYNSLIDGLCKNGHLDRAIALFNKMK 436

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              I+P   T T+L+ G+   G L  A   F  +L +G   DV  Y+ +I+G  K   + 
Sbjct: 437 DQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLE 496

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
             L M   ME NG  P+   +++++N L K+   D A KL  Q+  RGL
Sbjct: 497 EALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 211/403 (52%), Gaps = 5/403 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G  P+++T N ++   C  GQI    S+   +L  G +P+ +TF+TLI   C + ++ K
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNK 147

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A   ++ ++   +  D + Y  LI+G+ K G  +   +L+     R  K +V ++++++D
Sbjct: 148 ALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIID 207

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A      V  A   +  M   G   +V++Y+ LI G C   +L EA GL  +++++ + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINP 267

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           ++ TY+ L+D  CK GK+++  ++   M+K  +KPD +  S L++G      +  A   F
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVF 327

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
                M + P++  +  L++G C+ K   + + LF  M   N+ P ++T++ LI G+   
Sbjct: 328 NAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +S    L  +M  RG+  +VITY+++I GL K  ++   + +F  M+  G+ P    +
Sbjct: 388 GRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTF 447

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +LL+ L K   L  A + F  L  +G   D+  YN +I G+C
Sbjct: 448 TILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHC 490



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 247/489 (50%), Gaps = 17/489 (3%)

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK----LCRAMRGKG--- 177
           I  +D++V  F  M  + +  +P ++Q   + ++DS +  ++Y     L   +  KG   
Sbjct: 37  IQNVDDAVSQFNRM--LCMRHTPPIIQ--FNKILDSFAKIKHYSTAVSLSHRLELKGIQP 92

Query: 178 -FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
                  L+N     G I   F +  ++++RG+ P+ +T   ++K LC+ GQ+  A    
Sbjct: 93  DLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFH 152

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           D LL  G K + V++ TLIN  CK      A +L   +      P++ +Y+ +ID L K 
Sbjct: 153 DKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKY 212

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
             + E   L      +G+  DVV +++++  +     +  A+   + M+     PNV +Y
Sbjct: 213 QLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           +IL+  LC++G++ EA  +   +L   ++P ++TYS+L+DG+    +L+    +++ M  
Sbjct: 273 NILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSL 332

Query: 417 RGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G+ PD    ++LING     ++ +AL  F +  +  ++P +  +++L+DG C+  R + 
Sbjct: 333 MGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              L   M    I  +VIT+  LI G+   G L  AI LF +M  +G+ P   T++ ++ 
Sbjct: 393 VWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLD 452

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL KG  +      F+ +   G   D+  YNV++N   K+  L+ AL +  ++ + G  P
Sbjct: 453 GLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVP 512

Query: 592 DIITYNTII 600
           + +T++ II
Sbjct: 513 NAVTFDIII 521



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 212/419 (50%), Gaps = 11/419 (2%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +++A     +++     P I+  NKIL           A SL   L L G +P+++T + 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LIN FC   ++   F +   +++    P  I ++ LI GL   G++ +        L +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +K D V + ++++    IGD   A++   ++      PNV  Y+ +I  LC+   + EA 
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           GLF ++  + +   ++TY++LI GFC + KL++   L + M+ + + P+    ++L++ L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDG---CCRLKRATDTVKLFMLMGMYNIK 485
                + +A       ++  + P++  ++TLMDG      LK+A        LMG   + 
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMG---VT 336

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PDV ++T+LI G      +  A+ LF +M ++ + P ++TYS++I GL K   IS    +
Sbjct: 337 PDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              M   G+  ++  YN L++ L K  +LD A+ LF ++ D+G+ P   T+  ++ G C
Sbjct: 397 IDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLC 455



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 150/350 (42%), Gaps = 75/350 (21%)

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            I +V  AV  ++RML     P +I ++ ++    +      A  L  ++ ++ ++P L+
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLI 95

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF---- 440
           T + LI+ FC  G++  GFS+   ++KRG +P  +  + LI GL     +  AL F    
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 155

Query: 441 ------FFQSVRMTLI-------------------------PNLFIFNTLMDGCCRLKRA 469
                 F Q    TLI                         PN+ ++NT++D  C+ +  
Sbjct: 156 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 215

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ---------------- 513
           ++   LF  M    I  DV+T+T LI G      L  AI L  +                
Sbjct: 216 SEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 514 -------------------MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
                              MLK  + PDVITYS ++ G F    +    H+F  M   GV
Sbjct: 276 VDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGV 335

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            PD+  Y +L+N   K   +D AL LF ++  + + P I+TY+++I G C
Sbjct: 336 TPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC 385



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 119/242 (49%), Gaps = 8/242 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           YS L++ Y  + ++ ++  +F  MS MG+  +PD+     L++    +  V +   L + 
Sbjct: 307 YSTLMDGYFLVYELKKAQHVFNAMSLMGV--TPDVHSYTILINGFCKNKMVDEALNLFKE 364

Query: 173 MRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  K    G   Y  L++GL + G I   + +  ++  RG   N++T N ++  LC NG 
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGH 424

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A +LF+ +   G +P   TF+ L++  CK  +L+ A + +  ++      D+  Y++
Sbjct: 425 LDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNV 484

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+G  K G L+E   +L    + G   + V F  +++A     +  +A +   +M+  G
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544

Query: 349 FL 350
            L
Sbjct: 545 LL 546



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 37/172 (21%)

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           DA+  F + + M   P +  FN ++D   ++K  +  V L   + +  I+PD+IT  +LI
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL-FKGKNISVGLHMFKLMERNGV 554
                 G ++    +  ++LKRG  P  IT++ +I GL  KG+                 
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQ----------------- 144

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
                              ++ AL    +L  +G++ D ++Y T+I G C +
Sbjct: 145 -------------------VNKALHFHDKLLAQGIKFDQVSYGTLINGVCKI 177


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/431 (31%), Positives = 217/431 (50%), Gaps = 13/431 (3%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAM 173
           + LI  +  +G+I     + A +   G    PD V    L+  L     V +       +
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRG--YPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 174 RGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +GF +    Y  L+NG+ + G    A  + R++  R   PN+   + I+  LC    +
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 215

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  LF  + + G   +VVT+STLI  FC E KL++A  L N M+   + P++  Y+IL
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           +D L K G++KE   +L   L   +K DV+ +S++MD Y  + +V +A   ++ M   G 
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V +Y+ILI G C+   + EA  LF ++  + + P ++TYSSLIDG CKSG++   + 
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L D M  RG   D +  S LI+GL     +  A+  F +     + PN+F F  L+DG C
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLC 455

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  R  D  ++F  +       +V T+ V+I G   QG L  A+ +  +M   G  P+  
Sbjct: 456 KGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAF 515

Query: 525 TYSAIIHGLFK 535
           T+  II  LFK
Sbjct: 516 TFETIIIALFK 526



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 213/403 (52%), Gaps = 5/403 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G  P+++T N ++   C  GQI    S+   +L  G  P+ VT +TLI   C + +++K
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A   ++ ++      + + Y+ LI+G+ K G  +   +LL     R  K +V ++S+++D
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 207

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A      V  A   +  M   G   +V++YS LI G C +G+L EA GL  +++++ + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           ++ TY+ L+D  CK GK+++  S+   M+K  +KPD +  S L++G      +  A   F
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
                M + P++  +  L++G C+ K   + + LF  M   N+ P ++T++ LI G+   
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +     L  +M  RG   DVITYS++I GL K  ++   + +F  M+   + P+I  +
Sbjct: 388 GRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +LL+ L K   L  A ++F  L  +G   ++ TYN +I G+C
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 250/489 (51%), Gaps = 17/489 (3%)

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK----LCRAMRGKG--- 177
           I  +D++V  F  M  + +  +P ++Q   + ++DS +  ++Y     L   +  KG   
Sbjct: 37  IQNVDDAVSQFNRM--LCMRHTPPIIQ--FNKILDSFAKMKHYSTAVSLSHRLELKGIQP 92

Query: 178 -FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
                  L+N     G I   F +  ++++RG+ P+ VT N ++K LC+ GQ+  A    
Sbjct: 93  DLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFH 152

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           D LL  G + N V+++TLIN  CK      A +L   +      P++ +YS +ID L K 
Sbjct: 153 DKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKY 212

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
             + E   L      +G+  DVV +S+++  +   G +  A+   + M+     PNV +Y
Sbjct: 213 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           +IL+  LC++G++ EA  +   +L   ++P ++TYS+L+DG+    +++    +++ M  
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 417 RGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G+ PD    ++LING     ++ +AL  F +  +  ++P +  +++L+DG C+  R   
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPY 392

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              L   M       DVIT++ LI G+   G L  AI LF +M  + + P++ T++ ++ 
Sbjct: 393 VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL KG  +     +F+ +   G   ++  YNV++N   K+  L+ AL +  ++ D G  P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIP 512

Query: 592 DIITYNTII 600
           +  T+ TII
Sbjct: 513 NAFTFETII 521



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 197/381 (51%), Gaps = 5/381 (1%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A S F+ +L +   P ++ F+ ++++F K      A  L + +    + PDLI  +I
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+     G++  G  +L   L RG   D V  ++++      G V +A+  +D++L  G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F  N +SY+ LI G+C+ G    A  L  ++  R  +P++  YS++ID  CK   + + +
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 409 SLYDNMIKRGLKPDAVVCSLL-----INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M  +G+  D V  S L     I G + +A+    + V  T+ PN++ +N L+D  
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +  +   +  +M    +KPDVIT++ L+ G      +  A  +F  M   G+TPDV
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ +I+G  K K +   L++FK M +  + P I  Y+ L++ L K   +     L  +
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           + DRG   D+ITY+++I G C
Sbjct: 400 MRDRGQPADVITYSSLIDGLC 420



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 145/278 (52%), Gaps = 12/278 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN----SVGQYYKLC 170
           Y+ L++   + GK+ E+  + A M  +   + PD++    S L+D       V +   + 
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVM--LKACVKPDVIT--YSTLMDGYFLVYEVKKAQHVF 327

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            AM   G       Y  L+NG  +  +++ A ++ +++ Q+  VP IVT + ++  LC +
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+I     L D +   G   +V+T+S+LI+  CK   L++A  L+N M + ++ P++  +
Sbjct: 388 GRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +IL+DGL K GRLK+  E+    L +G  L+V  ++ +++ +   G +  A+    +M +
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
            G +PN  ++  +I  L ++    +A  L  Q++ R L
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 116/240 (48%), Gaps = 4/240 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS L++ Y  + ++ ++  +F  MS MG+         L++    +  V +   L + M 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 175 GK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K    G   Y  L++GL + G I   + +  ++  RG   +++T + ++  LC NG + 
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +LF+ +     +PN+ TF+ L++  CK  +L+ A +++  ++      ++  Y+++I
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G  K G L+E   +L    D G   +   F +++ A     +  +A +   +M+  G L
Sbjct: 487 NGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 54/115 (46%)

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           +H+       S  ++  A+  F +ML    TP +I ++ I+    K K+ S  + +   +
Sbjct: 26  SHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL 85

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           E  G+ PD+   N+L+N       +     +  ++  RG  PD +T NT+I G C
Sbjct: 86  ELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLC 140



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 63/141 (44%)

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           ++   D V  F  M      P +I    ++   A     S+A+ L  ++  +G+ PD+IT
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            + +I+       I+ G  +   + + G  PD    N L+  L  +  +  AL    +L 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 586 DRGLEPDIITYNTIICGYCSL 606
            +G + + ++Y T+I G C +
Sbjct: 157 AQGFQLNQVSYATLINGVCKI 177


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 232/492 (47%), Gaps = 19/492 (3%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK----LCRAMRGKG---- 177
           G++ +++ +F  M   G   SP +V    S L+D+      Y+    L   MR KG    
Sbjct: 176 GRVPDALAVFDDMLHRGC--SPSVVT--YSILLDATCKASGYRQAMVLLDEMRAKGCEPD 231

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y  L+N +  +G ++ A ++   +   G  P+ VT   +LK LC + +      LF 
Sbjct: 232 IVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFA 291

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +      P+ VTF+T++ + C++  +++A ++ + M E   +PD++ YS ++DGL   G
Sbjct: 292 EMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVG 351

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           R+ +  ELL      G K D + +++V+     I     A +    M+     P+ ++++
Sbjct: 352 RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFN 411

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I  LCQ+G +  A  +  Q+      P ++TY+S+IDG C    + D   L  N+   
Sbjct: 412 TVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSY 471

Query: 418 GLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G KPD V  + L+ GL       DA +     +     P+   FNT++   C+       
Sbjct: 472 GCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQA 531

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           ++   +M      P+  T+ +++  +   G    A+ L   M     TPD+ITY+ +I  
Sbjct: 532 IETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISN 589

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           + K   +   L + ++M  NG++PD   Y  L   + +E   D A+++  +L D GL PD
Sbjct: 590 ITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPD 649

Query: 593 IITYNTIICGYC 604
              YN I+ G+C
Sbjct: 650 ATFYNDILLGFC 661



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 203/400 (50%), Gaps = 11/400 (2%)

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +V CN ++KRLC  G++ +A  +F  L   G    VVT++T++N +C+  ++E A +L  
Sbjct: 98  VVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRL-- 152

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            +  M   PD   ++ LI  L   GR+ +   +    L RG    VV +S ++DA     
Sbjct: 153 -ISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKAS 211

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
              +A+   D M   G  P++++Y++LI  +C +G + EA  +   +     +P  +TY+
Sbjct: 212 GYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT 271

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRM 447
            ++   C S + ++   L+  M      PD V     V SL   GL+  A++        
Sbjct: 272 PVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEH 331

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
             IP++  +++++DG C + R  D V+L   +  Y  KPD I +T +++G+ S      A
Sbjct: 332 GCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHA 391

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             L  +M+     PD +T++ +I  L +   +   + + + M  NG  PDI  YN +++ 
Sbjct: 392 EELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDG 451

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L  E  +D A++L   L   G +PDI+T+NT++ G CS++
Sbjct: 452 LCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVD 491



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 214/461 (46%), Gaps = 45/461 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG  R G IE+A    R +    F P+  T N +++ LC+ G++ +A ++FD +
Sbjct: 132 TYNTMVNGYCRAGRIEDA---RRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDM 188

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G  P+VVT+S L++A CK +   +A  L + M      PD++ Y++LI+ +   G +
Sbjct: 189 LHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDV 248

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   +L      G K D V ++ V+ +  G        + +  M +    P+ ++++ +
Sbjct: 249 DEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTI 308

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  LCQQG +  A  +   +      P ++TYSS++DG C  G++ D   L   +   G 
Sbjct: 309 VTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 368

Query: 420 KPD----------------------------------------AVVCSLLINGLMGDALR 439
           KPD                                         V+ SL   GL+  A++
Sbjct: 369 KPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIK 428

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              Q       P++  +N+++DG C  +   D ++L   +  Y  KPD++T   L++G+ 
Sbjct: 429 VVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLC 488

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
           S      A  L   M+     PD  T++ +I  L +   +   +   K+M  NG  P+ +
Sbjct: 489 SVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQS 548

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            YN++++ L+K      ALKL   +T+    PD+ITYNT+I
Sbjct: 549 TYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVI 587



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 138/311 (44%), Gaps = 10/311 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ +I +  + G +D ++++   MS+ G   +PD+V    ++  L +   +    +L   
Sbjct: 410 FNTVIASLCQKGLVDRAIKVVEQMSENGC--NPDIVTYNSIIDGLCNERCIDDAMELLSN 467

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           ++  G       +  L+ GL      E+A  +   ++     P+  T N ++  LC  G 
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A     ++   G  PN  T++ +++A  K  K ++A +L + M   +  PDLI Y+ 
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNT 585

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I  + KAG+++E  +LL   +  GL  D + + S+           RA++   R+ + G
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+   Y+ ++ G CQ  R   A   F  ++     P   TY  L++       L +  
Sbjct: 646 LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAK 705

Query: 409 SLYDNMIKRGL 419
            L  N+   G+
Sbjct: 706 QLLVNLCSLGV 716


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 252/539 (46%), Gaps = 74/539 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  Y ++G++ E+  I   M+ +G+   PD                          
Sbjct: 387 YNIMINGYCKLGRMVEAHNILHEMTGVGV--RPDTYS----------------------- 421

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++G  +KG++  AF  +  +++ GF    +T N +LK  C  G I +A  
Sbjct: 422 ------YNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALR 475

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L+ ++L  G  PN ++ STL++ F K  K EKA  L+   +   L  +   ++ +I+GL 
Sbjct: 476 LWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLC 535

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  R+ E  EL+          D++ + ++   Y  IGD+ RA +  + + N GF P + 
Sbjct: 536 KIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIE 595

Query: 355 SYSILIKG---LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
            ++ LI G     Q G++ +   +  ++  R L P+ + Y +LI G+CK G L   ++LY
Sbjct: 596 FFNSLITGHFIAKQHGKVND---ILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLY 652

Query: 412 DNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNL------------- 453
             MI++GL P+  +CS L++     G   +A       V   +IP++             
Sbjct: 653 LEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANF 712

Query: 454 -------------FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
                         ++N ++ G C+L R  D   L   +       D  T++ LI G ++
Sbjct: 713 IDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSA 772

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G +  A  L   ML  GLTP+++TY+++I+GL K   +S  + +FK +   G++P+   
Sbjct: 773 SGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAIT 832

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           YN L++   K+  +  A KL  ++ + G+ P + TY+ +I G C+       GY +  I
Sbjct: 833 YNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCT------QGYMEEAI 885



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 147/577 (25%), Positives = 256/577 (44%), Gaps = 42/577 (7%)

Query: 38  ILANLIKTNNPTPA-----IQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVI 92
           ILA+L+    P P      ++ +K      S+ +   L+  L  +   D A  VFD+M  
Sbjct: 144 ILASLLSARPPAPPLFPHLVEVYK--EFSFSAASFDLLLRALANAGQLDGALQVFDEM-- 199

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
                    R     L    C+   ++    + G +  +V +F  M   G       V  
Sbjct: 200 ---------RTLGCRLSMRSCNS--ILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAI 248

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           +         V    +    M   G  V    Y  +MNG    G   +A  M   +  RG
Sbjct: 249 MAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRG 308

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVL-----LLVGPKPNVVTFSTLINAFCKEAK 263
           F PNIVT   ++K  C    +  A  +   +     L+V    +   F  +IN +C+  +
Sbjct: 309 FSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVV----DEAVFGAVINGYCQMGR 364

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +E A +L N M++  L  +L +Y+I+I+G  K GR+ E + +L      G++ D   ++S
Sbjct: 365 MEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNS 424

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D Y   G + +A +TY+ ML  GF    ++Y+ L+KG C  G + +A  L+  +L + 
Sbjct: 425 LVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKG 484

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           + P+ ++ S+L+DGF KSGK     +L+   + RGL  +    + +INGL     M +A 
Sbjct: 485 IAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAE 544

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG- 497
               +  +    P++  + TL  G C++       ++   +      P +     LI G 
Sbjct: 545 ELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGH 604

Query: 498 -IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
            IA Q    + IL  F+M  RGL+P+ + Y A+I G  K  ++    +++  M   G+ P
Sbjct: 605 FIAKQHGKVNDIL--FEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVP 662

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           ++ I + L++   ++   D A  +   L    + PDI
Sbjct: 663 NLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDI 699



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 205/432 (47%), Gaps = 41/432 (9%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           ++ L+  L   G ++ A  +  ++   G   ++ +CN IL RL   G +G   ++F+ + 
Sbjct: 176 FDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQ 235

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+  T + +  A+CK   +  A +    M +M                       
Sbjct: 236 RAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKM----------------------- 272

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
                       G+++++V + +VM+ Y  +G    A +  D +   GF PN+++Y++L+
Sbjct: 273 ------------GVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLV 320

Query: 361 KGLCQQGRLVEACGLFGQVLI-RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           KG C +  + EA G+  ++   ++L      + ++I+G+C+ G++ D   L + M+   L
Sbjct: 321 KGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRL 380

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + +  V +++ING      M +A     +   + + P+ + +N+L+DG C+        +
Sbjct: 381 QVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFE 440

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
            +  M         +T+  L++G  S GS+  A+ L+F MLK+G+ P+ I+ S ++ G F
Sbjct: 441 TYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFF 500

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K       L+++K     G+A +   +N ++N L K   +  A +L  ++      PDII
Sbjct: 501 KSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDII 560

Query: 595 TYNTIICGYCSL 606
           TY T+  GYC +
Sbjct: 561 TYRTLFSGYCKI 572



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 205/451 (45%), Gaps = 18/451 (3%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           +F + +  +       S L++ + + GK ++++ ++      G+  +      +++ L  
Sbjct: 477 WFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCK 536

Query: 160 SNSVGQYYKLCRAMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
              + +  +L   M+          Y  L +G  + G ++ A  +  ++   GF P I  
Sbjct: 537 IERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEF 596

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N ++    I  Q G  + +   +   G  PN V +  LI  +CKE  L  A+ LY  M+
Sbjct: 597 FNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMI 656

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           E  LVP+L I S L+   ++ G+  E N +L          ++V    + D      ++G
Sbjct: 657 EKGLVPNLFICSSLVSCFYRKGKFDEANLVLQ---------NLVGTDMIPDISAPRLEIG 707

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           +     D +  G      I ++I+I GLC+ GR+ +A  L   +  +       TYSSLI
Sbjct: 708 KVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLI 767

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI 450
            G   SG +   F L D M+  GL P+ V  + LI GL     +  A+  F +     + 
Sbjct: 768 HGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGIS 827

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN   +NTL+D  C+    T+  KL   M    I P V T+++LI G+ +QG +  AI L
Sbjct: 828 PNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKL 887

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             QM++  + P+ +TY  +I G  + +++ V
Sbjct: 888 LDQMIENNVDPNYVTYWTLIQGYVRCESVDV 918



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 185/412 (44%), Gaps = 43/412 (10%)

Query: 95  GKTYNFFRLFRDSLG----DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           GKT     L++++L          ++ +I    +I ++ E+ E+   M        PD++
Sbjct: 503 GKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQW--RCPPDII 560

Query: 151 --QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVI--- 205
             + L S       + +  ++   +   GF       N L+    I         ++   
Sbjct: 561 TYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEM 620

Query: 206 -QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
             RG  PN V    ++   C  G +  A +L+  ++  G  PN+   S+L++ F ++ K 
Sbjct: 621 SNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKF 680

Query: 265 EKAFQLYNLMMEMDLVPDL--------------------------IIYSILIDGLFKAGR 298
           ++A  +   ++  D++PD+                          I+++I+I GL K GR
Sbjct: 681 DEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGR 740

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +++   LL    D+G   D   +SS++      G V  A    D ML+ G  PN+++Y+ 
Sbjct: 741 IEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNS 800

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI GLC+ G L  A  LF ++  + + P+ +TY++LID  CK G + + F L   MI+ G
Sbjct: 801 LIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEG 860

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + P     S+LINGL     M +A++   Q +   + PN   + TL+ G  R
Sbjct: 861 IHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 4/175 (2%)

Query: 173 MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           ++ KGF      Y  L++G    G ++ AF +   ++  G  PNIVT N ++  LC +G+
Sbjct: 751 LKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGE 810

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A SLF  L   G  PN +T++TLI+  CK+  + +AF+L   M+E  + P +  YSI
Sbjct: 811 LSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSI 870

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           LI+GL   G ++E  +LL   ++  +  + V + +++  YV    V   +   D+
Sbjct: 871 LINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/299 (19%), Positives = 131/299 (43%), Gaps = 43/299 (14%)

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  S+ +L++ L   G+L  A  +F ++       S+ + +S+++   ++G L    +++
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 412 DNMIKRGLKPDAVVCSLL------INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + M + G  PD    +++      + G++  AL F  +  +M +  NL  ++ +M+G C 
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVV-HALEFVEEMTKMGVEVNLVAYHAVMNGYCE 290

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ------------------------ 501
           + +  D  ++   +      P+++T+T+L++G  ++                        
Sbjct: 291 VGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEA 350

Query: 502 ------------GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
                       G +  A  L  +M+   L  ++  Y+ +I+G  K   +    ++   M
Sbjct: 351 VFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM 410

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
              GV PD   YN L++   K+  ++ A + +  +   G     +TYN ++ G+CSL S
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGS 469


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 247/493 (50%), Gaps = 19/493 (3%)

Query: 131 SVEIFAYMSDMGIY-LSPDLVQ--RLMSCLVDSN-------SVGQYYKLCRAMRGKGFCV 180
           +V +F  M+  G   ++PD+     L+SC  D+        ++GQ  K    +R +    
Sbjct: 125 AVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKT--GLRAQAVTF 182

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
              L      K   +    + R++ + G  P++ +   +LK LC   +   A+ L  ++ 
Sbjct: 183 TPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMA 242

Query: 241 LVGPK--PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
             G    PNVV+++T+I+ F KE  + KA+ L+  M++  + P+++  + +IDGL K   
Sbjct: 243 EDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA 302

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + +   +L   +D  +  +   ++S++  Y+  G    AV+    M   G  PNV++YS+
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSM 362

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI  LC+ G   EA  +F  ++    +P+  TY SL+ G+   G L D  ++ D M++ G
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG 422

Query: 419 LKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           ++P   V ++ I      G + +A   F +  +   +P++  + T++DG C++ R  D +
Sbjct: 423 MRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAM 482

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
             F  M    + PD+IT   LI G A  G    A  LF++M+ RG+ P+V T++++I  L
Sbjct: 483 SRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKL 542

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           FK   ++    +F LM R G  P++  YN +++       +   +KL   +   GL+P  
Sbjct: 543 FKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTA 602

Query: 594 ITYNTIICGYCSL 606
           +T+NT++ G  S+
Sbjct: 603 VTFNTLLDGMVSM 615



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 233/512 (45%), Gaps = 55/512 (10%)

Query: 96  KTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           +T +   +    + + GC      Y+ L++      K +E+ E+   M++ G    P++V
Sbjct: 194 RTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVV 253

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
                                         Y  +++G  ++G +  A+ +  +++  G  
Sbjct: 254 S-----------------------------YTTVIHGFFKEGDVGKAYTLFCKMLDHGIP 284

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN+VTCN ++  LC    +  A ++   ++     PN  T+++LI+ +    +  +A ++
Sbjct: 285 PNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRI 344

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M      P+++ YS+LID L K+G   E  E+  + +  G K +   + S++  Y  
Sbjct: 345 LKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYAT 404

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G++       D M+  G  P    ++I I   C+ GRL EA   F ++  +   P ++ 
Sbjct: 405 EGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVA 464

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           Y+++IDG CK G+L D  S +  MI  GL PD +  + LI+G         A   F++ +
Sbjct: 465 YTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMM 524

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              + PN+  FN+++D   +  + T+  KLF LM     KP+V+++  +I G    G + 
Sbjct: 525 DRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 584

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
             + L   ML  GL P  +T++ ++ G+     +S+GL            PD+     L+
Sbjct: 585 EVMKLLDDMLLIGLKPTAVTFNTLLDGM-----VSMGLK-----------PDVVTCKTLI 628

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           +   ++  ++  L LF ++  +  + D IT N
Sbjct: 629 DSCCEDGRIEDILTLFREMLGKADKTDTITEN 660



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 208/428 (48%), Gaps = 25/428 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  + + G + ++  +F  M D GI  +      ++  L    ++ +   + + M 
Sbjct: 255 YTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI 314

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  L++G L  G    A  + +++ + G  PN+VT + ++  LC +G   
Sbjct: 315 DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHA 374

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F+ ++  G KPN  T+ +L++ +  E  L     + +LM++  + P   +++I I
Sbjct: 375 EAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEI 434

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
               K GRL E +        +G   D+V +++V+D    IG +  A+  + +M++ G  
Sbjct: 435 YAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLS 494

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++I+++ LI G    G+  +A  LF +++ R + P++ T++S+ID   K GK+ +   L
Sbjct: 495 PDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKL 554

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +D M + G KP+ V  + +I+G      +G+ ++     + + L P    FNTL+DG   
Sbjct: 555 FDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG--- 611

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                      + MG+   KPDV+T   LI      G +   + LF +ML +    D IT
Sbjct: 612 ----------MVSMGL---KPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 658

Query: 526 YSAIIHGL 533
            +  + G+
Sbjct: 659 ENIKLRGV 666



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 223/463 (48%), Gaps = 26/463 (5%)

Query: 68  AQLIHVLLQSDMRDVASHVFDKMVI--------QFGKTYNFF-RLFRDSLGDFGCDYSFL 118
           A+LIH++ + D  +   +V     +          GK Y  F ++    +       + +
Sbjct: 235 AELIHMMAE-DGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSV 293

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG- 177
           I+   ++  +D++  +   M D  I  +      L+   + S    +  ++ + M   G 
Sbjct: 294 IDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ 353

Query: 178 ---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++ L + G+   A  +   +IQ G  PN  T   +L      G + + ++
Sbjct: 354 RPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNN 413

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           + D+++  G +P    F+  I A+CK  +L++A   +N M +   +PD++ Y+ +IDGL 
Sbjct: 414 VKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLC 473

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K GRL +        +D GL  D++ F++++  +   G   +A + +  M++ G  PNV 
Sbjct: 474 KIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVN 533

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +++ +I  L ++G++ EA  LF  +     +P++++Y+++I G+  +G++ +   L D+M
Sbjct: 534 TFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 593

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +  GLKP AV  + L++G+           V M L P++    TL+D CC   R  D + 
Sbjct: 594 LLIGLKPTAVTFNTLLDGM-----------VSMGLKPDVVTCKTLIDSCCEDGRIEDILT 642

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLS-SAILLFFQMLK 516
           LF  M     K D IT  + +RG+  + S   S++++  + L+
Sbjct: 643 LFREMLGKADKTDTITENIKLRGVTVKASYHCSSVVISLKALE 685



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 202/452 (44%), Gaps = 68/452 (15%)

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           E+A  +  +++QR    +I   N++L  +    +   +SS+ D     GP   V  F+ +
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTV---ARAPVSSSVRD-----GPALAVSMFNRM 132

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
             A  K+                 + PD+  + ILI     AG L  G   L   +  GL
Sbjct: 133 ARAGAKK-----------------VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGL 175

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +   V F+ ++           A+     RM   G  P+V SY+ L+KGLC + +  EA 
Sbjct: 176 RAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAA 235

Query: 374 GLFGQVLI--RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
            L   +        P++++Y+++I GF K G +   ++L+  M+  G+ P+ V C+ +I+
Sbjct: 236 ELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVID 295

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           GL     M  A     Q +   ++PN   +N+L+ G     + T+ V++   M     +P
Sbjct: 296 GLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRP 355

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI------- 539
           +V+T+++LI  +   G  + A  +F  M++ G  P+  TY +++HG     N+       
Sbjct: 356 NVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVK 415

Query: 540 --------SVGLHMFKL--------------------MERNGVAPDIAIYNVLLNMLIKE 571
                     G H+F +                    M++ G  PDI  Y  +++ L K 
Sbjct: 416 DLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKI 475

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             LD A+  F Q+ D GL PDIIT+NT+I G+
Sbjct: 476 GRLDDAMSRFCQMIDDGLSPDIITFNTLIHGF 507



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 105/244 (43%), Gaps = 29/244 (11%)

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCK---SGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           +A  LF ++L R    S+   + L+    +   S  +RDG +L  +M  R  +  A    
Sbjct: 82  DALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGA---- 137

Query: 428 LLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                                + P++  F  L+  CC              +    ++  
Sbjct: 138 -------------------KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQ 178

Query: 488 VITHTVLIRGIASQGSLSSAI-LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
            +T T L+R + ++   S A+ ++  +M + G TPDV +Y+ ++ GL   K       + 
Sbjct: 179 AVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELI 238

Query: 547 KLMERNG--VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +M  +G    P++  Y  +++   KE ++  A  LF ++ D G+ P+++T N++I G C
Sbjct: 239 HMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLC 298

Query: 605 SLNS 608
            + +
Sbjct: 299 KVQA 302


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 230/462 (49%), Gaps = 41/462 (8%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++GL  +    +A    RQ   + F P++V+ N I+ R C  G    A S F ++L  G
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+  +++ LI+       +E+A +L N M +  L PD++ Y I+  G    G +    
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 304 ELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           E++   L D GLK D+V ++ ++  +  +G++  A++    +L+ GF  NVI YS+L+  
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY----------- 411
           LC++G++ EA  L  ++    L+P L+TYS LI G CK GK++    LY           
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395

Query: 412 ------------------------DNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFF 442
                                   D++I   L+PD  + +++I+G   +GD   A+R + 
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +     + P++  FN+L+ G C+ ++  +  +L   + ++ ++P  +T+T L+     +G
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           +++    L  +M  + + P V+TY+ +I GL K + +   + + + M   G+APD   YN
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            ++    K  ++  A +L   +    LEP   TYN +I G C
Sbjct: 576 TIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLC 617



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 220/430 (51%), Gaps = 6/430 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++GL+  G +E A  +   + ++G  P++VT   + K   + G +  A  +   +L
Sbjct: 223 YNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKML 282

Query: 241 L-VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KP++VT++ LI   C+   +E+A +L   ++      ++I+YS+L+  L K G++
Sbjct: 283 TDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQV 342

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +LL       L+ D+V +S ++      G V +A+Q Y  M      PN  ++S +
Sbjct: 343 DEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGI 402

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +KGLC++G L +A   F  +++  L P +  Y+ +IDG+ K G + +   LY  +  + +
Sbjct: 403 LKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAI 462

Query: 420 KPDAVVCSLLINGLMGD----ALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVK 474
            P  V  + LI G   +      R   +S+++  L P+   + TLM+  C         +
Sbjct: 463 TPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHE 522

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L + M + +I+P V+T+TV+I+G+  Q  L  ++ L   M  +GL PD ITY+ II    
Sbjct: 523 LLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFC 582

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K++     +   M  + + P  A YNVL++ L +  +++ A ++   L DR +    +
Sbjct: 583 KAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKV 642

Query: 595 TYNTIICGYC 604
            Y T+I  +C
Sbjct: 643 AYTTMIKAHC 652



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 249/526 (47%), Gaps = 51/526 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--------RLMSCLVDSNSVGQY 166
           Y+ LI   +  G ++E++E+   M   G  L PD+V          L+  +  +  + Q 
Sbjct: 223 YNILIHGLIVAGSMEEALELTNDMEKQG--LQPDMVTYKIVAKGFHLLGLMSGAREIIQK 280

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
                 ++      Y  L+ G  + G IE A  + R ++  GF  N++  + +L  LC  
Sbjct: 281 MLTDEGLK-PDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKR 339

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           GQ+  A  L   +     +P++VT+S LI+  CK+ K+++A QLY  M    + P+   +
Sbjct: 340 GQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAH 399

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           S ++ GL + G L +      + +   L+ DV +++ ++D YV +GDV  AV+ Y R+ +
Sbjct: 400 SGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRD 459

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG---- 402
               P++++++ LI G C+  ++VEA  L   + +  LEPS +TY++L++ +C+ G    
Sbjct: 460 KAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINK 519

Query: 403 -------------------------------KLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
                                          KL +   L ++M  +GL PD +  + +I 
Sbjct: 520 LHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQ 579

Query: 432 GL-MGDALRFFFQSVRMTLIPNL----FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                  +R  F+ +   LI NL      +N L+DG CR     D  ++ + +   NI  
Sbjct: 580 CFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINL 639

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
             + +T +I+    +G    A+ +F QM+++G    +  YSA+I+ L K   I+   + F
Sbjct: 640 TKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYF 699

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
            +M  +GV+PD  I+ ++LN   +  ++ +  +L   +   GL  D
Sbjct: 700 CIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 187/367 (50%), Gaps = 9/367 (2%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +P++ T+++L+         +  + +YN + +          SI++DGL    R ++   
Sbjct: 115 RPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVL 171

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
            L     +     VV F+++M  Y  +G    A   +  ML  G LP+  SY+ILI GL 
Sbjct: 172 FLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLI 231

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI-KRGLKPDA 423
             G + EA  L   +  + L+P ++TY  +  GF   G +     +   M+   GLKPD 
Sbjct: 232 VAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDL 291

Query: 424 VVCSLLING--LMG---DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  ++LI G   MG   +ALR     +      N+ +++ L+   C+  +  + ++L   
Sbjct: 292 VTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYE 351

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M   N++PD++T+++LI G+  QG +  AI L+ +M    + P+   +S I+ GL +   
Sbjct: 352 MEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGM 411

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +S     F  +  + + PD+ +YN++++  +K  +++ A++L+ +L D+ + P I+T+N+
Sbjct: 412 LSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNS 471

Query: 599 IICGYCS 605
           +I G+C 
Sbjct: 472 LIYGFCK 478



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 175/366 (47%), Gaps = 41/366 (11%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+VV+F+T+++ +CK    + A   + +M++  ++PD   Y+ILI GL  AG ++E  EL
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALEL 242

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
                                               + M   G  P++++Y I+ KG   
Sbjct: 243 T-----------------------------------NDMEKQGLQPDMVTYKIVAKGFHL 267

Query: 366 QGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
            G +  A  +  ++L    L+P L+TY+ LI G C+ G + +   L  +++  G + + +
Sbjct: 268 LGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVI 327

Query: 425 VCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           + S+L++     G + +AL+  ++     L P+L  ++ L+ G C+  +    ++L+  M
Sbjct: 328 LYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               I P+   H+ +++G+  +G LS A + F  ++   L PDV  Y+ +I G  K  ++
Sbjct: 388 CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDV 447

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              + ++K +    + P I  +N L+    K   +  A +L   +   GLEP  +TY T+
Sbjct: 448 EEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTL 507

Query: 600 ICGYCS 605
           +  YC 
Sbjct: 508 MNAYCE 513



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 44/231 (19%)

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----D 436
           + L PS+ TY+SL+     +  + D   +Y+++   G    A   S++++GL G     D
Sbjct: 112 QNLRPSIQTYNSLLYNLRHTDIMWD---VYNDIKDSGTPQSARTSSIIVDGLCGQSRFRD 168

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A+ F  Q+      P++  FNT+M   C+L  A D  K F  M                 
Sbjct: 169 AVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLA-DVAKSFFCM----------------- 210

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
                            MLK G+ PD  +Y+ +IHGL    ++   L +   ME+ G+ P
Sbjct: 211 -----------------MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQP 253

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQ-LTDRGLEPDIITYNTIICGYCSL 606
           D+  Y ++         +  A ++  + LTD GL+PD++TY  +ICG+C +
Sbjct: 254 DMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQM 304


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 225/419 (53%), Gaps = 26/419 (6%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM  LL++    +  ++++++I+R   PN+ T N ++  LC  G++  A  + + + + G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 244 PKPNVVTFSTLINAFCK---EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             PNVV+++TLI+ +CK     K+ KA  +   M+E D+ P+L  ++ILIDG +K   L 
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              ++    LD+ +K +V+ ++S+++     G +  A+   D+M++ G  PN+I+Y+ LI
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+   L EA  +FG V  +   P+   Y+ LID +CK GK+ DGF+L + M + G+ 
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 421 PDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           PD    + LI GL      +A +  F  +    +P+L  F+ LM+G CR   +     L 
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK-RGLTPDVITYSAIIHGLF- 534
             M    +KP  +T+ ++++G   +G+L +A  +  QM K R L  +V +Y+ ++ G   
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           KGK     + + +++E+ G+ P+   Y +     +KE           ++ D+G  PDI
Sbjct: 554 KGKLEDANMLLNEMLEK-GLVPNRITYEI-----VKE-----------EMVDQGFVPDI 595



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 203/422 (48%), Gaps = 19/422 (4%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL-FDVLLLVGPKPNVVTFSTL 254
           N   + RQ+I     P++  C +    L  N  I  +  L F +L  +          + 
Sbjct: 66  NPNELFRQLISSELDPDL--CLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSF 123

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-- 312
           ++ F +        Q++++   + +  ++ + SI+ D L  A       EL   A  R  
Sbjct: 124 LDGFVRNGS---DHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSG 180

Query: 313 --GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
             G KL  +    +M A +           Y  M+     PNV +++++I  LC+ G++ 
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCK---SGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           +A  +   + +    P++++Y++LIDG+CK   +GK+    ++   M++  + P+    +
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300

Query: 428 LLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +LI+G   D     +++ F + +   + PN+  +N+L++G C   + ++ + +   M   
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            ++P++IT+  LI G      L  A+ +F  +  +G  P    Y+ +I    K   I  G
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             + + MER G+ PD+  YN L+  L +  N++AA KLF QLT +GL PD++T++ ++ G
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEG 479

Query: 603 YC 604
           YC
Sbjct: 480 YC 481



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 185/365 (50%), Gaps = 24/365 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPDLVQRLMSCLVDS----NSVGQYYKL 169
           ++ +I    + GK++++ ++   M DM +Y  SP++V    + L+D        G+ YK 
Sbjct: 226 FNVVINALCKTGKMNKARDV---MEDMKVYGCSPNVVS--YNTLIDGYCKLGGNGKMYKA 280

Query: 170 CRAMR-------GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
              ++             +  L++G  +   +  +  + ++++ +   PN+++ N ++  
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC  G+I  A S+ D ++  G +PN++T++ LIN FCK   L++A  ++  +     VP 
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
             +Y++LID   K G++ +G  L       G+  DV  ++ ++      G++  A + +D
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           ++ + G LP+++++ IL++G C++G   +A  L  ++    L+P  LTY+ ++ G+CK G
Sbjct: 461 QLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519

Query: 403 KLRDGFSLYDNMIK-RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
            L+   ++   M K R L+ +    ++L+ G      + DA     + +   L+PN   +
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579

Query: 457 NTLMD 461
             + +
Sbjct: 580 EIVKE 584



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 131/270 (48%), Gaps = 34/270 (12%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G+  + +S   L+  L ++ R  +   ++ +++ R+++P++ T++ +I+  CK+GK+   
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             + ++M   G       CS                       PN+  +NTL+DG C+L 
Sbjct: 243 RDVMEDMKVYG-------CS-----------------------PNVVSYNTLIDGYCKLG 272

Query: 468 RATDTVK---LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
                 K   +   M   ++ P++ T  +LI G     +L  ++ +F +ML + + P+VI
Sbjct: 273 GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           +Y+++I+GL  G  IS  + M   M   GV P++  YN L+N   K   L  AL +FG +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392

Query: 585 TDRGLEPDIITYNTIICGYCSLNSCLIDGY 614
             +G  P    YN +I  YC L   + DG+
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGK-IDDGF 421


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 227/440 (51%), Gaps = 12/440 (2%)

Query: 172 AMRGKGFCVYEFLMN----GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           +M G  FCV   L +      +R   I   F   ++    GF  ++++CN +L  L    
Sbjct: 75  SMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKES 134

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           + G+   ++  ++    + NV++F+ ++N  CK  KL +A  +   M    + P++I Y+
Sbjct: 135 ENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYN 194

Query: 288 ILIDGLFKAGRLKE---GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            LIDG  K GR+ +    + +L   + +G+  + V ++ ++D +    +V  A++ +  M
Sbjct: 195 TLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEM 254

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
              G  PNV++Y+ILI GLC  G++ EA  L  Q++   LEP+++T++ LI+GFCK+  +
Sbjct: 255 QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTV 314

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTL 459
            +  +L+++M K+G+ P+A+  + LI+     G M DA   +   +   + P +  +N L
Sbjct: 315 NEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCL 374

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           + G CR         L   M    +  DV+T+ +LI  +  +G    A+ L  +M ++GL
Sbjct: 375 IAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGL 434

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P  +TY+ ++ G  +  N+   L +   MER G   ++  +NVL+     +  L+ A  
Sbjct: 435 NPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANG 494

Query: 580 LFGQLTDRGLEPDIITYNTI 599
           L  ++ +RGL P+  TY  I
Sbjct: 495 LLNEMLERGLVPNRTTYEII 514



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 197/382 (51%), Gaps = 10/382 (2%)

Query: 233 SSLFDVLLLVGPK--PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           S++F  + + G     N +    L+ AF +  K+ + F+ +    +      LI  + L+
Sbjct: 68  SAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLL 127

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K     +   +    + R ++L+V+ F+ V++    +G + RA    + M   G  
Sbjct: 128 SGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVS 187

Query: 351 PNVISYSILIKGLCQQGR---LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           PNVI+Y+ LI G C+ GR   + +A  +  +++ + + P+ +TY+ LIDGFCK   +   
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGA 247

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDG 462
             ++  M ++GL+P+ V  ++LINGL  D     A+    Q V   L PN+   N L++G
Sbjct: 248 MRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLING 307

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+ K   + + LF  M    + P+ +T+T LI      G +  A  L+  M+ RG+ P+
Sbjct: 308 FCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPE 367

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TY+ +I GL +  ++     +   M    ++ D+  YN+L++ L K+     A+KL  
Sbjct: 368 VSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLD 427

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
           ++ ++GL P  +TYNT++ GYC
Sbjct: 428 EMFEKGLNPSHVTYNTLMDGYC 449



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 201/370 (54%), Gaps = 8/370 (2%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G K ++++ + L++   KE++      +Y  M++  +  ++I ++I+++GL K G+L   
Sbjct: 115 GFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR---AVQTYDRMLNGGFLPNVISYSIL 359
            +++      G+  +V+ +++++D Y  +G +G+   A      M+  G  PN ++Y+IL
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNIL 234

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+   +  A  +FG++  + L P+++TY+ LI+G C  GK+ +  +L D M+   L
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +P+ V  ++LING      + +A+  F    +  + PN   + TL+D  C+  R  D   
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFA 354

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L+ +M    I P+V T+  LI G+  +G + +A  L  +M+ + L+ DV+TY+ +I  L 
Sbjct: 355 LYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLC 414

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K       + +   M   G+ P    YN L++   +E NL AAL +  ++  +G + +++
Sbjct: 415 KKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVV 474

Query: 595 TYNTIICGYC 604
           T+N +I G+C
Sbjct: 475 THNVLIKGFC 484



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 175/327 (53%), Gaps = 7/327 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDM---GIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           Y+ LI+ Y ++G+I +  +  A + +M   GI  +      L+       +V    ++  
Sbjct: 193 YNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFG 252

Query: 172 AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M+ +G       Y  L+NGL   G ++ A  +  Q++     PN+VT N ++   C N 
Sbjct: 253 EMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNK 312

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            +  A +LF+ +   G  PN +T++TLI+A+CK+ ++E AF LYN+M++  + P++  Y+
Sbjct: 313 TVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYN 372

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL + G +K    L+   + + L  DVV ++ ++D+    G+  +AV+  D M   
Sbjct: 373 CLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEK 432

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+ ++Y+ L+ G C++G L  A  +  ++  +  + +++T++ LI GFC  G+L D 
Sbjct: 433 GLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDA 492

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLM 434
             L + M++RGL P+     ++   +M
Sbjct: 493 NGLLNEMLERGLVPNRTTYEIIKEEMM 519



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 187/361 (51%), Gaps = 16/361 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYK---L 169
           ++ ++    ++GK++ + ++   M   G+  SP+++    L+        +G+ YK   +
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGV--SPNVITYNTLIDGYCKMGRIGKMYKADAI 215

Query: 170 CRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
            + M  KG C     Y  L++G  +   +  A  +  ++ ++G  PN+VT N ++  LC 
Sbjct: 216 LKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCS 275

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           +G++  A +L D ++    +PNVVT + LIN FCK   + +A  L+N M +  + P+ + 
Sbjct: 276 DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMT 335

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LID   K GR+++   L    +DRG+  +V  ++ ++      GDV  A    + M+
Sbjct: 336 YTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMV 395

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           +     +V++Y+ILI  LC++G   +A  L  ++  + L PS +TY++L+DG+C+ G LR
Sbjct: 396 SKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLR 455

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
               +   M ++G + + V  ++LI G      + DA     + +   L+PN   +  + 
Sbjct: 456 AALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIK 515

Query: 461 D 461
           +
Sbjct: 516 E 516



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 182/359 (50%), Gaps = 32/359 (8%)

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD-LIIYSILIDGLFKAG----RLKEGNEL 305
           +S + +   K  K EK + +  +   + +  D   + SIL D L  A     ++  G E 
Sbjct: 48  YSKIRSFLDKFVKYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEA 107

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
              A D G KL ++  + ++   V   + G     Y  M+      NVIS++I++ GLC+
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCK 167

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G+L  A  +   + +  + P+++TY++LIDG+CK G+           I +  K DA++
Sbjct: 168 VGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR-----------IGKMYKADAIL 216

Query: 426 CSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
             ++  G+                 PN   +N L+DG C+ +  +  +++F  M    ++
Sbjct: 217 KEMVAKGI----------------CPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P+V+T+ +LI G+ S G +  A+ L  QM+   L P+V+T++ +I+G  K K ++  +++
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           F  ME+ GV P+   Y  L++   K+  ++ A  L+  + DRG+ P++ TYN +I G C
Sbjct: 321 FNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLC 379



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 3/152 (1%)

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N L+ G  +     D   ++  M    I+ +VI+  +++ G+   G L+ A  +   M  
Sbjct: 124 NPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKV 183

Query: 517 RGLTPDVITYSAIIHGLFKGKNISV---GLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
            G++P+VITY+ +I G  K   I        + K M   G+ P+   YN+L++   K+ N
Sbjct: 184 WGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDEN 243

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           +  A+++FG++  +GL P+++TYN +I G CS
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGLCS 275



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 4/103 (3%)

Query: 508 ILLFFQMLKR----GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           IL  F+  KR    G    +I+ + ++ GL K         +++ M +  +  ++  +N+
Sbjct: 101 ILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNI 160

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           ++N L K   L+ A  +   +   G+ P++ITYNT+I GYC +
Sbjct: 161 VVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKM 203


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 233/494 (47%), Gaps = 34/494 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L++   R  ++  +V +   MS  G+         LM   V+  S+    ++   M 
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G    +     L+NG  + G +E+A    +Q I  GF P+ +T N  +  LC N  +G
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  + DV++  G  P+V T++ ++N  CK  +LE+A  + N M++   +PD+  ++ LI
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L    RL+E  +L      +G+  DV  F+ +++A   +GD   A++ ++ M N G  
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y+ LI  LC  G+L +A  L   +       S +TY+++IDG CK  ++ +   +
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 483

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +D M  +G+  +A+  + LI+GL                              C+ K+  
Sbjct: 484 FDQMDLQGISRNAITFNTLIDGL------------------------------CKDKKID 513

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D  +L   M    ++P+ IT+  ++     QG +  A  +   M   G   DV+TY  +I
Sbjct: 514 DAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLI 573

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +GL K     V L + + M   G+ P    YN +L  L +  N+  AL LF ++ + G  
Sbjct: 574 NGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633

Query: 591 PDIITYNTIICGYC 604
           PD +TY  +  G C
Sbjct: 634 PDALTYKIVFRGLC 647



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 216/431 (50%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  L+N L+    ++    ++ ++  RG  P++VT N ++K LC   Q+  A  + + +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+  TF+TL+  F +E  +E A ++   M+EM      +  ++LI+G  K GR+
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++    +   +  G + D + +++ ++       VG A++  D M+  G  P+V +Y+I+
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 327

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  LC+ G+L EA G+  Q++ R   P + T+++LI   C   +L +   L   +  +G+
Sbjct: 328 VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    ++LIN L  +GD   ALR F +       P+   +NTL+D  C L +    + 
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M         IT+  +I G+  +  +  A  +F QM  +G++ + IT++ +I GL 
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K I     +   M   G+ P+   YN +L    K+ ++  A  +   +T  G E D++
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 595 TYNTIICGYCS 605
           TY T+I G C 
Sbjct: 568 TYGTLINGLCK 578



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 194/403 (48%), Gaps = 5/403 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   + V  N +L  L    ++    S++  +   G KP+VVTF+TL+ A C+  ++  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             +   M    + PD   ++ L+ G  + G ++    +    L+ G     V  + +++ 
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y  +G V  A+    + +  GF P+ I+Y+  + GLCQ   +  A  +   ++    +P 
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           + TY+ +++  CK+G+L +   + + M+ RG  PD    + LI  L     + +AL    
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           Q     + P+++ FN L++  C++      ++LF  M      PD +T+  LI  + S G
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A+ L   M   G     ITY+ II GL K   I     +F  M+  G++ +   +N
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 500

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            L++ L K+  +D A +L  Q+   GL+P+ ITYN+I+  YC 
Sbjct: 501 TLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 543



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 184/370 (49%), Gaps = 5/370 (1%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L G + + V ++ L+N   + +K++    +Y+ M    + PD++ ++ L+  L +A +++
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               +L     RG+  D   F+++M  +V  G +  A++   RML  G     ++ ++LI
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ GR+ +A G   Q +    EP  +TY++ ++G C++  +     + D M++ G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 421 PDA-----VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD      VV  L  NG + +A     Q V    +P++  FNTL+   C   R  + + L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              + +  + PDV T  +LI  +   G    A+ LF +M   G TPD +TY+ +I  L  
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +   L + K ME  G       YN +++ L K+  ++ A ++F Q+  +G+  + IT
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 596 YNTIICGYCS 605
           +NT+I G C 
Sbjct: 499 FNTLIDGLCK 508



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 3/152 (1%)

Query: 471 DTVKLFM--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
           D V L +  L  ++ I+ D + +  L+  +     +     ++ +M  RG+ PDV+T++ 
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++  L +   +   + M + M   GVAPD   +  L+   ++E +++AAL++  ++ + G
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 589 LEPDIITYNTIICGYCSLNSCLID-GYFKSQI 619
                +T N +I GYC L       GY + +I
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 233/494 (47%), Gaps = 34/494 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L++   R  ++  +V +   MS  G+         LM   V+  S+    ++   M 
Sbjct: 184 FNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G    +     L+NG  + G +E+A    +Q I  GF P+ +T N  +  LC N  +G
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  + DV++  G  P+V T++ ++N  CK  +LE+A  + N M++   +PD+  ++ LI
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L    RL+E  +L      +G+  DV  F+ +++A   +GD   A++ ++ M N G  
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y+ LI  LC  G+L +A  L   +       S +TY+++IDG CK  ++ +   +
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 483

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +D M  +G+  +A+  + LI+GL                              C+ K+  
Sbjct: 484 FDQMDLQGISRNAITFNTLIDGL------------------------------CKDKKID 513

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D  +L   M    ++P+ IT+  ++     QG +  A  +   M   G   DV+TY  +I
Sbjct: 514 DAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLI 573

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +GL K     V L + + M   G+ P    YN +L  L +  N+  AL LF ++ + G  
Sbjct: 574 NGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633

Query: 591 PDIITYNTIICGYC 604
           PD +TY  +  G C
Sbjct: 634 PDALTYKIVFRGLC 647



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 216/431 (50%), Gaps = 5/431 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  L+N L+    ++    ++ ++  RG  P++VT N ++K LC   Q+  A  + + +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEM 207

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+  TF+TL+  F +E  +E A ++   M+EM      +  ++LI+G  K GR+
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++    +   +  G + D + +++ ++       VG A++  D M+  G  P+V +Y+I+
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 327

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  LC+ G+L EA G+  Q++ R   P + T+++LI   C   +L +   L   +  +G+
Sbjct: 328 VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    ++LIN L  +GD   ALR F +       P+   +NTL+D  C L +    + 
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M         IT+  +I G+  +  +  A  +F QM  +G++ + IT++ +I GL 
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K I     +   M   G+ P+   YN +L    K+ ++  A  +   +T  G E D++
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 595 TYNTIICGYCS 605
           TY T+I G C 
Sbjct: 568 TYGTLINGLCK 578



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 194/403 (48%), Gaps = 5/403 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   + V  N +L  L    ++    S++  +   G KP+VVTF+TL+ A C+  ++  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             +   M    + PD   ++ L+ G  + G ++    +    L+ G     V  + +++ 
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y  +G V  A+    + +  GF P+ I+Y+  + GLCQ   +  A  +   ++    +P 
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           + TY+ +++  CK+G+L +   + + M+ RG  PD    + LI  L     + +AL    
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           Q     + P+++ FN L++  C++      ++LF  M      PD +T+  LI  + S G
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A+ L   M   G     ITY+ II GL K   I     +F  M+  G++ +   +N
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 500

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            L++ L K+  +D A +L  Q+   GL+P+ ITYN+I+  YC 
Sbjct: 501 TLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 543



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 184/370 (49%), Gaps = 5/370 (1%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L G + + V ++ L+N   + +K++    +Y+ M    + PD++ ++ L+  L +A +++
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               +L     RG+  D   F+++M  +V  G +  A++   RML  G     ++ ++LI
Sbjct: 199 TAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ GR+ +A G   Q +    EP  +TY++ ++G C++  +     + D M++ G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 421 PDA-----VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD      VV  L  NG + +A     Q V    +P++  FNTL+   C   R  + + L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              + +  + PDV T  +LI  +   G    A+ LF +M   G TPD +TY+ +I  L  
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +   L + K ME  G       YN +++ L K+  ++ A ++F Q+  +G+  + IT
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 596 YNTIICGYCS 605
           +NT+I G C 
Sbjct: 499 FNTLIDGLCK 508



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 3/152 (1%)

Query: 471 DTVKLFM--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
           D V L +  L  ++ I+ D + +  L+  +     +     ++ +M  RG+ PDV+T++ 
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++  L +   +   + M + M   GVAPD   +  L+   ++E +++AAL++  ++ + G
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 589 LEPDIITYNTIICGYCSLNSCLID-GYFKSQI 619
                +T N +I GYC L       GY + +I
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 225/453 (49%), Gaps = 14/453 (3%)

Query: 124 RIGKIDESVEIFAYMSDM-GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVY- 181
           R GK D +  +FA + D  G   S  +   LM    DS  V    +  R +R   F +  
Sbjct: 130 RKGK-DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPF 188

Query: 182 ---EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
               +L++ ++        +  + ++++ GF P +   N ++ + C  G I +A  +F+ 
Sbjct: 189 HGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNE 248

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G +P  V+F+TLIN  CK   L++ F+L   M E  + PD+  YS+LI GL K GR
Sbjct: 249 IRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGR 308

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L    +L      RGL+ + + F++++D       +  A+ TY +ML  G  P+++ Y+ 
Sbjct: 309 LDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNT 368

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ GLC+ G + +A  L  ++ +  ++P  +TY++LIDG+CK G L     +   M + G
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           +  D V  + LI+G      + DA R   + V   + P+   +  ++DG C+        
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           KL   M +   KP VIT+ VL+ G+  QG + +A +L   ML  G+TPD ITY+ ++ G 
Sbjct: 489 KLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGH 548

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
            K         + KL    G+  D A Y  L++
Sbjct: 549 CKNGKAE---DLLKLRNEKGLIVDYAYYTSLVS 578



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 202/430 (46%), Gaps = 40/430 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ LM      G + +A    R V    F      C  +L ++  +       + +  +
Sbjct: 155 VFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEI 214

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G  P V  ++ LIN FCKE  +  A  ++N + +  L P  + ++ LI+GL K+  L
Sbjct: 215 LEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNL 274

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            EG  L  T                                   M      P+V +YS+L
Sbjct: 275 DEGFRLKKT-----------------------------------MEENRIYPDVFTYSVL 299

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC++GRL  A  LF ++  R L P+ +T+++LIDG C+S ++    + Y  M+  G+
Sbjct: 300 IHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGV 359

Query: 420 KPDAVVCSLLINGL--MGD--ALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVK 474
           KPD V+ + L+NGL  +GD    R     +RM  + P+   + TL+DG C+       ++
Sbjct: 360 KPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAME 419

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M    +  D +  T LI G    G +  A     +M++ G+ PD  TY+ +I G  
Sbjct: 420 IRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYC 479

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  N+ +G  + K M+ NG  P +  YNVL+N L K+  +  A  L   + + G+ PD I
Sbjct: 480 KKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDI 539

Query: 595 TYNTIICGYC 604
           TYN ++ G+C
Sbjct: 540 TYNILLEGHC 549



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 179/416 (43%), Gaps = 83/416 (19%)

Query: 15  INKCYCSESKTHISDLQFNQA------------NAILANLIKTNNPTPAIQFFKWTHNCV 62
           INK +C E     + L FN+             N ++  L K+ N     +  K      
Sbjct: 230 INK-FCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288

Query: 63  SSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLI 119
             P++   + LIH L +    DVA  +FD+M  Q G   N            G  ++ LI
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ-QRGLRPN------------GITFTALI 335

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +   R  +ID ++  +  M  MG+   PDLV    L++ L     V +  KL   MR  G
Sbjct: 336 DGQCRSRRIDSAMNTYHQMLTMGV--KPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L++G  ++G +E+A  + + + + G V + V    ++   C +G++ +A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
                ++  G KP+  T++ +I+ +CK+  ++  F+L   M      P +I Y++L++GL
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G++K  N LL                                   + MLN G  P+ 
Sbjct: 514 CKQGQMKNANMLL-----------------------------------EAMLNLGVTPDD 538

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT----YSSLIDGFCKSGKLR 405
           I+Y+IL++G C+ G+  +       +L  R E  L+     Y+SL+  + KS K R
Sbjct: 539 ITYNILLEGHCKNGKAED-------LLKLRNEKGLIVDYAYYTSLVSEYNKSLKDR 587



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 83/167 (49%)

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
           F+ + +     P +  +N L++  C+     D   +F  +    ++P  ++   LI G+ 
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
              +L     L   M +  + PDV TYS +IHGL K   + V   +F  M++ G+ P+  
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +  L++   +   +D+A+  + Q+   G++PD++ YNT++ G C +
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKV 376


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 220/424 (51%), Gaps = 10/424 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVI---QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           ++N ++++G    AF  +  V     +GF PN++T N I+K LC  GQI  A   F  + 
Sbjct: 142 VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMP 201

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L    P+V T+STL+N  CKE ++++A  L + M     +P+ + +++LID L K G L 
Sbjct: 202 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 261

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              +L+     +G   + V +++++      G + +A+   ++M++   +PN ++Y  +I
Sbjct: 262 RAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII 321

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GL +Q R  +   +   +  R  + +   YSSLI G  K GK  +   L+  M ++G K
Sbjct: 322 NGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCK 381

Query: 421 PDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ VV    I+GL  D     A     + +    +PN F +++LM G  +   +   + +
Sbjct: 382 PNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILV 441

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           +  M   +++ +V+  +VL+ G+   G L  A+ ++  ML  GL PDV+ YS++I GL  
Sbjct: 442 WKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCD 501

Query: 536 GKNISVGLHMFKLM--ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
             ++  GL +F  M  +     PD+  YN+L N L ++ NL  A+ L   + D G +PD 
Sbjct: 502 VGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDS 561

Query: 594 ITYN 597
           +T N
Sbjct: 562 LTCN 565



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 239/497 (48%), Gaps = 52/497 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+   ++G+ID +V+ F  M              L +C  D               
Sbjct: 177 YNLIIKALCKLGQIDRAVDTFREMP-------------LKNCNPD--------------- 208

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  LMNGL ++  ++ A  +  ++   G +PN VT N ++  L  NG +  A+ 
Sbjct: 209 ---VFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 265

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L D + L G  PN VT++TLI+  C + KL+KA  L   M+    VP+ + Y  +I+GL 
Sbjct: 266 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 325

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  R ++G  +L++  +RG K +  ++SS++      G    AV+ +  M   G  PNV+
Sbjct: 326 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 385

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y   I GLC+  +  EA  +  ++L +   P+  TYSSL+ GF K G  +    ++  M
Sbjct: 386 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 445

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + + ++ + V CS+L+NGL     + +AL  +   +   L P++  +++++ G C +   
Sbjct: 446 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSV 505

Query: 470 TDTVKLFMLMGMYNIK--PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
              +KLF  M     K  PDV+T+ +L   +  Q +L+ AI L   ML  G  PD +T +
Sbjct: 506 DKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN 565

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
             +  L +  N      +F             +  +++ +L +E  L +AL++  ++  R
Sbjct: 566 IFLETLRERINPPQDGRLF-------------LDELVVRLLKRERKL-SALRIVEEMLLR 611

Query: 588 GLEPDIITYNTIICGYC 604
            L P+  T++ +I   C
Sbjct: 612 FLPPEPSTWSRVIQRTC 628



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 189/387 (48%), Gaps = 36/387 (9%)

Query: 228 QIGNASSLFDVLLLV------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
           Q G+ S  F   L V      G +PN++T++ +I A CK  ++++A   +  M   +  P
Sbjct: 148 QEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNP 207

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+  YS L++GL K  R+ E   LL      G   + V F+ ++DA    GD+ RA +  
Sbjct: 208 DVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLV 267

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           D M   G +PN ++Y+ LI GLC +G+L +A  L  +++  +  P+ +TY ++I+G  K 
Sbjct: 268 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQ 327

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            +  DG  +  +M +RG K +  + S LI+GL  +                         
Sbjct: 328 RRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEG------------------------ 363

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
                 ++ + V+L+  M     KP+V+ +   I G+        A  +  +ML +G  P
Sbjct: 364 ------KSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP 417

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           +  TYS+++ G FK  +    + ++K M    +  ++   +VLLN L +   L  AL ++
Sbjct: 418 NAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW 477

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNS 608
             +   GL+PD++ Y+++I G C + S
Sbjct: 478 THMLGEGLKPDVVAYSSMIKGLCDVGS 504



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 152/354 (42%), Gaps = 62/354 (17%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI      GK+D+++ +   M       +      +++ LV          +  +M 
Sbjct: 282 YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSME 341

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G      +Y  L++GL ++G  ENA  + +++ ++G  PN+V     +  LC + +  
Sbjct: 342 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPD 401

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +   +L  G  PN  T+S+L+  F K+   +KA  ++  MM  D+  +++  S+L+
Sbjct: 402 EAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLL 461

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML--NGG 348
           +GL ++GRL+E   +    L  GLK DVV +SS++     +G V + ++ +  M      
Sbjct: 462 NGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPK 521

Query: 349 FLPNVISYSILIKGLCQQGRLVEA------------------CGLF-------------- 376
             P+V++Y+IL   LC+Q  L  A                  C +F              
Sbjct: 522 SRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDG 581

Query: 377 ------------------------GQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
                                    ++L+R L P   T+S +I   CK  ++R+
Sbjct: 582 RLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRE 635



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 174/408 (42%), Gaps = 61/408 (14%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           PK ++   + L  +  K A+L   F   +L +  +  PD      +   +FK+ R + G+
Sbjct: 2   PKFSIHQLNPLTISLHKPARLSPFFYFSSLPLSSNSTPDAQNELSISPQIFKS-RPQFGS 60

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI--LIK 361
                      KL    F  +++ Y    +     Q  DRM   G    V++ +I  LI 
Sbjct: 61  ----------YKLGDATFYRLIENYATSREFHFIHQVLDRMKREG---RVLTETIFILIF 107

Query: 362 GLCQQGRLV-EACGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI---K 416
             C +  L  EA   F ++      + ++ +++S+++   + G     F  Y ++     
Sbjct: 108 KACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANS 167

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           +G +P+ +  +L+I  L     +  A+  F +       P++F ++TLM+G C+ +R  +
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            V L   M      P+ +T  VLI  ++  G LS A  L   M  +G  P+ +TY+ +IH
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 287

Query: 532 GL-FKGK----------------------------------NISVGLHMFKLMERNGVAP 556
           GL  KGK                                      G+H+   ME  G   
Sbjct: 288 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 347

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  IY+ L++ L KE   + A++L+ ++ ++G +P+++ Y   I G C
Sbjct: 348 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLC 395


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 218/438 (49%), Gaps = 10/438 (2%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           F  Y  L++GL +   + +A  + ++++    VP+  T   +++ LC+  ++ +A  L +
Sbjct: 39  FLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVE 98

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L  G   N +T+S L++  CK  +L++A  L   M E    P ++ Y+ +I G  +A 
Sbjct: 99  EMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRAR 158

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           R+ E +  +   +  G   D++ +++++  +    DVGR ++    +   GF P++++YS
Sbjct: 159 RVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYS 218

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I GLC+ GRL +A  +F ++      P+ +TY+SLI G+C++G + +   L   M+  
Sbjct: 219 TVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD 275

Query: 418 GLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
              PD V  + L++     G + DA   F Q V   L P++  F +L+DG C   R  D 
Sbjct: 276 KCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 335

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           ++L   +      P + T+  ++ G      +  A  L      RG  P+ +TY+ ++ G
Sbjct: 336 LELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAG 395

Query: 533 LFKGKNISVGL-HMFKLMERNGVAP-DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
             +       L ++ +L    G  P  +A+Y ++L+ L ++   D A++ + ++  RG  
Sbjct: 396 CCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYV 455

Query: 591 PDIITYNTIICGYCSLNS 608
           P   T+ T++   C  + 
Sbjct: 456 PAAATFATVVFALCKAHQ 473



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 198/399 (49%), Gaps = 9/399 (2%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P  +  N ++  LC  G++ +A  ++  +    P P+ +T++ L++   K  +L  A Q+
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M+    VPD    ++++  L    R+ +  EL+   L RG+  + + +S+++D    
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
              +  AV   + M   G  P V++Y+ +I G C+  R+ EA G   Q++     P ++T
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           Y++LI GFCKS  +  G  L   + +RG  PD V  S +I+GL     + DA+  F +  
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE-- 239

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
            M+  P    +N+L+ G CR     + ++L   M      PDV+T+T L+      G L 
Sbjct: 240 -MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  LF QM+   L+PDV+T+++++ GL     +   L + + + R G  P I  YN ++
Sbjct: 299 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 358

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +   K   +  A +L      RG  P+ +TYN ++ G C
Sbjct: 359 DGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 397



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 184/369 (49%), Gaps = 11/369 (2%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P  +  + +I   C+  +L  A  +Y  M +    PD + Y+ L+ GL KA RL++  ++
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGD-VGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           L   +      D    + V+ +   +GD V  A +  + ML+ G   N I+YS L+ GLC
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLC-LGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           +  RL EA  L   +  R   P+++TY+S+I GFC++ ++ +     + M+  G  PD +
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + LI G      +G  L    +  R    P++  ++T++DG C+  R  D V +F  M
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              +  P  IT+  LI G    G +  AI L  +M+     PDV+TY+ ++    K   +
Sbjct: 241 ---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                +F+ M  N ++PD+  +  L++ L  E  ++ AL+L  ++T RG  P I TYN +
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 357

Query: 600 ICGYCSLNS 608
           + GYC  N 
Sbjct: 358 VDGYCKANQ 366



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 125/538 (23%), Positives = 231/538 (42%), Gaps = 68/538 (12%)

Query: 4   KFKNLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVS 63
           + ++ L V+R +N         H  D  F     ++  L K      A+Q  +   +   
Sbjct: 20  RLRHALGVYRQMND-------AHPPD--FLTYTKLVHGLSKARRLRDAVQVLQEMVSARH 70

Query: 64  SPNIAQLIHVLLQS----DMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLI 119
            P+   L  V++QS    D  D A  + ++M +  G   N               YS L+
Sbjct: 71  VPDNTTLT-VVVQSLCLGDRVDDARELVEEM-LHRGMAANAIT------------YSALV 116

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC 179
           +   +  ++DE+V +   M++ G   +P +V                             
Sbjct: 117 DGLCKCERLDEAVALVETMAERGC--APTVV----------------------------- 145

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++ G  R   ++ A     Q++  G  P+I+T   ++   C +  +G    L   +
Sbjct: 146 TYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEV 205

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P++VT+ST+I+  CK  +L  A  ++    EM   P  I Y+ LI G  +AG +
Sbjct: 206 TRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDM 262

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   LL   +D     DVV ++++M A+  +G +  A + + +M+     P+V++++ L
Sbjct: 263 DEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 322

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GLC +GR+ +A  L  ++  R   P++ TY+ ++DG+CK+ ++R    L  +   RG 
Sbjct: 323 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQ--SVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            P+ V  ++L+ G         AL++  Q  S       ++ ++  ++D  CR  R  D 
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           V+ +  M      P   T   ++  +        A  L  +M+K G TP   T  A++
Sbjct: 443 VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVV 500



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 6/226 (2%)

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           + P  L ++ +I G C++G+LR    +Y  M      PD +  + L++GL     + DA+
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           +   + V    +P+      ++   C   R  D  +L   M    +  + IT++ L+ G+
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                L  A+ L   M +RG  P V+TY++II G  + + +       + M   G  PDI
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             Y  L+    K  ++   L+L G++T RG  PDI+TY+T+I G C
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLC 225



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/302 (21%), Positives = 139/302 (46%), Gaps = 33/302 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  Y R G +DE++ +   M D     +PD+V                        
Sbjct: 249 YNSLIGGYCRAGDMDEAIRLLGKMVD--DKCAPDVV------------------------ 282

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  LM+   + G +++A+ + +Q++     P++VT   ++  LC  G++ +A  
Sbjct: 283 -----TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 337

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G  P + T++ +++ +CK  ++ KA +L         VP+ + Y+IL+ G  
Sbjct: 338 LLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 397

Query: 295 KAGRLKEGNELL--LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           +AGR  +  + L  L +        V +++ ++DA    G    AVQ Y+ M+  G++P 
Sbjct: 398 RAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPA 457

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             +++ ++  LC+  +  +A  L  +++     P   T  +++  +C++G ++    L  
Sbjct: 458 AATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELAS 517

Query: 413 NM 414
            +
Sbjct: 518 EL 519


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 222/439 (50%), Gaps = 9/439 (2%)

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ KG       +  +++  L+    E  + ++ ++ +      + T N ++  LC  G+
Sbjct: 192 MKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGK 251

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A      +  +G KPNVVT++T+I+ +C   ++E A  + ++M    + PD   Y  
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G+ K G+L+E + +L    + GL    V +++++D Y   GD+ +A    D M+   
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP V +Y++LI  L  +G++ EA G+   +    + P  +TY+ LI+G+C+ G  +  F
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+D MI +G++P  V  + LI  L     M  A   F + +R    P+L +FN L+DG 
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C          L   M   NI PD +T+  L++G   +G +  A  L  +M +RG+ PD 
Sbjct: 492 CANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDH 551

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           I+Y+ +I G  K  +I+    +   M   G  P +  YN L+  L K    D A +L  +
Sbjct: 552 ISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKE 611

Query: 584 LTDRGLEPDIITYNTIICG 602
           +  +G+ PD  TY ++I G
Sbjct: 612 MVSKGITPDDSTYFSLIEG 630



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 187/363 (51%), Gaps = 9/363 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++G   +G +E A  +   +  RG  P+  T   ++  +C  G++  AS + + +
Sbjct: 273 TYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKM 332

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             +G  P  VT++TLI+ +C +  L KAF   + M+   ++P +  Y++LI  LF  G++
Sbjct: 333 KEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKM 392

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E + ++    D G+  D + ++ +++ Y   G+  +A   +D M++ G  P +++Y+ L
Sbjct: 393 DEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSL 452

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  L ++ R+  A  LF +++     P L+ +++LIDG C +G L   F+L   M KR +
Sbjct: 453 IYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNI 512

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V  + L+ G      + +A     +  R  + P+   +NTL+ G  +     D   
Sbjct: 513 VPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFT 572

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIA--SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           +   M      P ++T+  LI+G+    QG L+  +L   +M+ +G+TPD  TY ++I G
Sbjct: 573 IRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLK--EMVSKGITPDDSTYFSLIEG 630

Query: 533 LFK 535
           + K
Sbjct: 631 IGK 633



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 183/367 (49%), Gaps = 9/367 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  Y   G+++ +  +   M + G+         L+S +     + +   +   M+
Sbjct: 274 YNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMK 333

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++G   KG +  AF    ++++R  +P + T N ++  L + G++ 
Sbjct: 334 EIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMD 393

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +   +   G  P+ +T++ LIN +C+    +KAF L++ M+   + P L+ Y+ LI
Sbjct: 394 EADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLI 453

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K  R+K  ++L    +  G   D+++F++++D +   G++ RA      M     +
Sbjct: 454 YVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIV 513

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++Y+ L++G C++G++ EA  L  ++  R + P  ++Y++LI G+ K G + D F++
Sbjct: 514 PDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTI 573

Query: 411 YDNMIKRGLKPDAVVCSLLINGL----MGD-ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            D M+  G  P  +  + LI GL     GD A     + V   + P+   + +L++G  +
Sbjct: 574 RDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633

Query: 466 LKRATDT 472
           +  +++ 
Sbjct: 634 VDDSSEA 640



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 156/308 (50%), Gaps = 17/308 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDM---GIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           Y+ LI+ Y   G +   V+ F Y  +M    I  +      L+  L     + +   + +
Sbjct: 344 YNTLIDGYCNKGDL---VKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIK 400

Query: 172 AMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M   G       Y  L+NG  R G  + AF++H ++I +G  P +VT   ++  L    
Sbjct: 401 DMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRN 460

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  LF+ ++  G  P+++ F+ LI+  C    L++AF L   M + ++VPD + Y+
Sbjct: 461 RMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYN 520

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+ G  + G+++E  ELL     RG++ D + +++++  Y   GD+  A    D ML+ 
Sbjct: 521 TLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSI 580

Query: 348 GFLPNVISYSILIKGLC--QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           GF P +++Y+ LI+GLC  QQG L E   L  +++ + + P   TY SLI+G    GK+ 
Sbjct: 581 GFNPTLLTYNALIQGLCKNQQGDLAEE--LLKEMVSKGITPDDSTYFSLIEGI---GKVD 635

Query: 406 DGFSLYDN 413
           D     D+
Sbjct: 636 DSSEASDS 643



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 176/393 (44%), Gaps = 41/393 (10%)

Query: 220 LKRLCINGQIGNASSLFDVLLL----VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
           L +  I  ++     +F  L +    +G K ++V F  LI A C+  + + AF+ +++M 
Sbjct: 135 LLKQTIESRVAGVKDVFHELAITRDRLGTKSSIV-FDMLIRACCELKRGDDAFECFDMMK 193

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           E  +VP +  ++ ++    K  + +    L        +K  V  F+ +++     G + 
Sbjct: 194 EKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLK 253

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           +A      M N G  PNV++Y+ +I G C +GR+  A  +   +  R +EP   TY SLI
Sbjct: 254 KAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLI 313

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
            G CK GKL +   + + M + GL P AV                               
Sbjct: 314 SGMCKGGKLEEASGILEKMKEIGLLPTAVT------------------------------ 343

Query: 456 FNTLMDGCCRLKRATDTVKLFML---MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +NTL+DG C      D VK F     M    I P V T+ +LI  +  +G +  A  +  
Sbjct: 344 YNTLIDGYCN---KGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIK 400

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            M   G+ PD ITY+ +I+G  +  N     ++   M   G+ P +  Y  L+ +L K  
Sbjct: 401 DMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRN 460

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            + AA  LF ++   G  PD+I +N +I G+C+
Sbjct: 461 RMKAADDLFEKIIREGASPDLIMFNALIDGHCA 493


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 231/437 (52%), Gaps = 7/437 (1%)

Query: 175 GKGFCVYE--FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G GF +Y    L+  L +  ++E A ++++Q++  G  P+++T N ++  L   G++  A
Sbjct: 158 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 217

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             +   +      P+V T+++LI   C+   L+ AF +++ M++    P+ + YS LI+G
Sbjct: 218 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 277

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L   GR+ E  ++L   +++G++  V  ++  + A   I     A++   RM   G  PN
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V +Y+ LI GL + G+L  A GL+ ++L   L P+ +TY++LI+  C  G+      ++ 
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397

Query: 413 NMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M   G   +    + +I GL   GD   A+  F + ++M  +P +  +NTL++G     
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
              +  +L  LM     +PD  T+  L+ G +  G L SA   F +M++ GL P+ ++Y+
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           A+I G  K   + + L + K ME  G  P++  YN ++N L KE     A K+  ++ ++
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577

Query: 588 GLEPDIITYNTIICGYC 604
           GL P++ITY T+I G C
Sbjct: 578 GLLPNVITYTTLIDGLC 594



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 210/428 (49%), Gaps = 5/428 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NGL  +G ++ A  M  ++I++G  P + T    +  LC       A  L   +
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +PNV T++ LI+   +  KLE A  LY+ M++  LVP+ + Y+ LI+ L   GR 
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               ++       G   +   ++ ++      GD+ +A+  +++ML  G LP V++Y+ L
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G   +G +  A  L   +     EP   TY+ L+ GF K GKL      +  M++ GL
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ V  + LI+G   D     AL    +   M   PN+  +N +++G  +  R ++  K
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M    + P+VIT+T LI G+   G    A  +F  M KR   P++ TYS++I+GL 
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +         + K MER G+APD   +  L++  +    +D A  L  ++ D G +P+  
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYR 689

Query: 595 TYNTIICG 602
           TY+ ++ G
Sbjct: 690 TYSVLLKG 697



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 223/469 (47%), Gaps = 32/469 (6%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIF 135
           D+A  VFD+MV +                  GCD     YS LI      G++DE++++ 
Sbjct: 250 DLAFGVFDRMVKE------------------GCDPNSVTYSTLINGLCNEGRVDEALDML 291

Query: 136 AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRK 191
             M + GI  +       ++ L       +  +L   M+ +G       Y  L++GL R 
Sbjct: 292 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 351

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G +E A  ++ ++++ G VPN VT N ++  LC+ G+   A  +F  +   G   N  T+
Sbjct: 352 GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 411

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + +I   C    +EKA  L+  M++M  +P ++ Y+ LI+G    G +     LL    +
Sbjct: 412 NEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 471

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G + D   ++ ++  +   G +  A   +  M+  G  PN +SY+ LI G  + G++  
Sbjct: 472 NGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDI 531

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  L  ++      P++ +Y+++I+G  K  +  +   + D M+++GL P+ +  + LI+
Sbjct: 532 ALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLID 591

Query: 432 GLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           GL  +     A + F    +   +PNL+ +++L+ G C+  +A +   L   M    + P
Sbjct: 592 GLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP 651

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           D +T T LI G    G +  A LL  +M+  G  P+  TYS ++ GL K
Sbjct: 652 DEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 173/360 (48%), Gaps = 6/360 (1%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           + ++ ++ L      Y+ LI      G+   +++IF +M   G   +      ++  L  
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420

Query: 160 SNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
              + +   L   M   G       Y  L+NG L KG + NA  +   + + G  P+  T
Sbjct: 421 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N+++      G++ +AS  F  ++  G  PN V+++ LI+   K+ K++ A  L   M 
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           EM   P++  Y+ +I+GL K  R  E  ++    +++GL  +V+ +++++D     G   
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQ 600

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A + +  M     LPN+ +YS LI GLCQ+G+  EA  L  ++  + L P  +T++SLI
Sbjct: 601 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLI 660

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
           DGF   G++   F L   M+  G KP+    S+L+ GL  + L    +     L+ N F+
Sbjct: 661 DGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECL--LLEEKIFPLVDNYFL 718



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 84/170 (49%)

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A   + Q +   + P+L  FNTL++   +  +  +   +   +  Y++ PDV T+T LI 
Sbjct: 182 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 241

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G     +L  A  +F +M+K G  P+ +TYS +I+GL     +   L M + M   G+ P
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +  Y + +  L    + + A++L  ++  RG  P++ TY  +I G   L
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 351


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 241/484 (49%), Gaps = 10/484 (2%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
           K+D+++ +F  M     + S     +L+S +   N       L   M+  G       Y 
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
             +N   R+  +  A  +  ++++ G+ P+IVT N +L   C   +I  A +L D ++ +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G +P+ VTF+TL++   +  K  +A  L   M+     PDL+ Y  +I+GL K G     
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             LL       ++ DVV++++++D       +  A   +++M   G  P+V +Y+ LI  
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK-RGLKP 421
           LC  GR  +A  L   +L + + P L+ +++LID F K GKL +   LYD M+K +   P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D V  + LI G      + + +  F +  +  L+ N   + TL+ G  + +   +   +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    + PD++T+ +L+ G+ + G++ +A+++F  M KR +  D++TY+ +I  L K 
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +  G  +F  +   GV P++  Y  +++   ++   + A  LF ++ + G  P+  TY
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534

Query: 597 NTII 600
           NT+I
Sbjct: 535 NTLI 538



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 241/463 (52%), Gaps = 6/463 (1%)

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           +L ++++  L   +++G +  + ++        +  L++ + +    +    +  Q+   
Sbjct: 45  NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   N+ T +  +   C   Q+  A ++   ++ +G  P++VT ++L+N FC   ++ +A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L + M+EM   PD + ++ L+ GLF+  +  E   L+   + +G + D+V + +V++ 
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G+   A+   ++M  G    +V+ Y+ +I GLC+   + +A  LF ++  + ++P 
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
           + TY+ LI   C  G+  D   L  +M+++ + PD V  + LI+     G + +A + + 
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344

Query: 443 QSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
           + V+     P++  +NTL+ G C+ KR  + +++F  M    +  + +T+T LI G    
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
               +A ++F QM+  G+ PD++TY+ ++ GL    N+   L +F+ M++  +  DI  Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             ++  L K   ++    LF  L+ +G++P+++TY T++ G+C
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 224/439 (51%), Gaps = 7/439 (1%)

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           E L   +L+   +++A  +   +++    P+IV  +K+L  +    +     SL + +  
Sbjct: 44  ENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN 103

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G   N+ T+S  IN FC+ ++L  A  +   MM++   P ++  + L++G     R+ E
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              L+   ++ G + D V F++++           AV   +RM+  G  P++++Y  +I 
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GLC++G    A  L  ++   ++E  ++ Y+++IDG CK   + D F L++ M  +G+KP
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283

Query: 422 DAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D    + LI+     G   DA R     +   + P+L  FN L+D   +  +  +  KL+
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343

Query: 477 -MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
             ++   +  PDV+ +  LI+G      +   + +F +M +RGL  + +TY+ +IHG F+
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            ++      +FK M  +GV PDI  YN+LL+ L    N++ AL +F  +  R ++ DI+T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463

Query: 596 YNTIICGYCSLNSCLIDGY 614
           Y T+I   C     + DG+
Sbjct: 464 YTTMIEALCKAGK-VEDGW 481



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/565 (23%), Positives = 270/565 (47%), Gaps = 36/565 (6%)

Query: 14  SINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHV 73
           S + C  + S+  + DL+ + A  +  +++K+  P P+I  F    + ++  N   L+ +
Sbjct: 38  SSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSR-PFPSIVEFSKLLSAIAKMNKFDLV-I 95

Query: 74  LLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVE 133
            L   M+++            G ++N +             YS  I  + R  ++  ++ 
Sbjct: 96  SLGEQMQNL------------GISHNLYT------------YSIFINYFCRRSQLSLALA 131

Query: 134 IFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLL 189
           I   M  +G   S   +  L++     N + +   L   M   G+      +  L++GL 
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           +      A  +  +++ +G  P++VT   ++  LC  G+   A +L + +     + +VV
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            ++T+I+  CK   ++ AF L+N M    + PD+  Y+ LI  L   GR  + + LL   
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF-LPNVISYSILIKGLCQQGR 368
           L++ +  D+V F++++DA+V  G +  A + YD M+      P+V++Y+ LIKG C+  R
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           + E   +F ++  R L  + +TY++LI GF ++    +   ++  M+  G+ PD +  ++
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431

Query: 429 LINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           L++GL  +     AL  F    +  +  ++  + T+++  C+  +  D   LF  + +  
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           +KP+V+T+T ++ G   +G    A  LF +M + G  P+  TY+ +I    +  + +   
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551

Query: 544 HMFKLMERNGVAPDIAIYNVLLNML 568
            + K M   G A D + + ++ NML
Sbjct: 552 ELIKEMRSCGFAGDASTFGLVTNML 576



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 138/287 (48%), Gaps = 12/287 (4%)

Query: 93  QFGKTYNFFRLFRDSL-GDFGCDYSF---LIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
            +G+  +  RL  D L  +   D  F   LI+ +V+ GK+ E+ +++  M     +  PD
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK-SKHCFPD 355

Query: 149 LV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHR 202
           +V    L+        V +  ++ R M  +G       Y  L++G  +    +NA  + +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           Q++  G  P+I+T N +L  LC NG +  A  +F+ +     K ++VT++T+I A CK  
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           K+E  + L+  +    + P+++ Y+ ++ G  + G  +E + L +   + G   +   ++
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           +++ A +  GD   + +    M + GF  +  ++  L+  +   GRL
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRL 581


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 250/499 (50%), Gaps = 11/499 (2%)

Query: 116 SFLIENYVRI-GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +F++E ++R+  K+++   +F +M    I    D    +   L     + Q   +   MR
Sbjct: 126 NFMLE-FLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMR 184

Query: 175 GKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF +  +  NGL+    + G    A  ++R+++  G  P++ T + ++  L       
Sbjct: 185 KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSE 244

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               L   +  +G +PNV TF+  I    +  K+++A++++  M +    PDL+ Y++LI
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L  AG+L+   EL +     G K D V++ +++D +   GD+    + + +M   G++
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V++++IL+  LC+     EA   F  +  + + P+L TY++LI G  ++G++ D   L
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKL 424

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M   G++P A   ++ I+     G  G A+  F +     ++PN+   N  +     
Sbjct: 425 LGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           + R  +   +F  +    + PD +T+ ++++  +  G +  A+ L  +M++ G  PDVI 
Sbjct: 485 MGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIV 544

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            +++I  L+K   +     MF  M+   ++P +  YN LL+ L KE  +  A++LF  + 
Sbjct: 545 VNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604

Query: 586 DRGLEPDIITYNTIICGYC 604
           ++   P+ I++NT++  +C
Sbjct: 605 EKKCSPNTISFNTLLDCFC 623



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 249/528 (47%), Gaps = 59/528 (11%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQ----FGKTYNFFRLF----RDS---------LGDFG 112
           LIH+L+QS     A  V+ +MV +      KTY+   +     RDS         + D G
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257

Query: 113 CD---YSFLIENYV--RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
                Y+F I   V  R GKIDE+ EIF  M D G    PDLV                 
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGC--GPDLV----------------- 298

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                        Y  L++ L   G +ENA  +  ++   G  P+ V    +L +    G
Sbjct: 299 ------------TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            +      +  +   G  P+VVTF+ L++  CK    ++AF  +++M +  ++P+L  Y+
Sbjct: 347 DLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYN 406

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL +AGR+++  +LL T    G++     ++  +D +   G+ G+AV+T+++M   
Sbjct: 407 TLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAK 466

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +PN+++ +  +  L + GRL EA  +F  +    L P  +TY+ ++  + K G++ + 
Sbjct: 467 GIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEA 526

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            +L   MI+ G +PD +V + LI+     G + +A + F +   M L P +  +NTL+ G
Sbjct: 527 VNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSG 586

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +  R    ++LF  M      P+ I+   L+        +  A+ +F +M      PD
Sbjct: 587 LGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPD 646

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           V+TY+ +I+GL K   ++     F  ++++ + PD      LL  L+K
Sbjct: 647 VLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVK 693



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 133/541 (24%), Positives = 250/541 (46%), Gaps = 49/541 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y  L++ +   G +D   E ++ M   G Y+ PD+V    L+  L  +    + +     
Sbjct: 335 YITLLDKFNDFGDLDTFKEFWSQMEADG-YM-PDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR +G       Y  L+ GLLR G IE+A  +   +   G  P   T N  +     +G+
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGE 452

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            G A   F+ +   G  PN+V  +  + +  +  +L +A  ++N + E  L PD + Y++
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++    K G++ E   LL   +  G + DV+V +S++D+    G V  A Q +DRM +  
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P V++Y+ L+ GL ++GR+ +A  LF  ++ ++  P+ +++++L+D FCK+ ++    
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELAL 632

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD----ALRFFFQSVRMTLIPNLFIFNTLMDG-- 462
            ++  M     KPD +  + +I GL+ +       +FF  ++ ++ P+     TL+ G  
Sbjct: 633 KMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLV 692

Query: 463 -CCRLKRATDTVKLFM--------------LMGMYNIKPD-----VITHTVLIRGIASQG 502
            C ++  A    + FM              LMG   ++ +     +    +++ GI  + 
Sbjct: 693 KCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICRED 752

Query: 503 SL----------SSAILLFFQML-----KRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           S               L  +Q+      K G++P + +Y+ +I  L +         +FK
Sbjct: 753 SFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFK 812

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            M+  G APD   +N+LL +  K   +    +L+ ++  R  +PD ITYN +I      N
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872

Query: 608 S 608
           +
Sbjct: 873 N 873



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 227/498 (45%), Gaps = 22/498 (4%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG--- 177
             +G++ E+  +F  + + G  L+PD V    +M C      V +   L   M   G   
Sbjct: 483 AEMGRLREAKTMFNGLRENG--LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 178 -FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
              V   L++ L + G ++ A+ M  ++      P +VT N +L  L   G++  A  LF
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + ++     PN ++F+TL++ FCK  ++E A ++++ M  MD  PD++ Y+ +I GL K 
Sbjct: 601 ESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLNGGFLPNVIS 355
            ++          L + +  D V   +++   V  G +G A+    D M    F  N   
Sbjct: 661 NKVNHAF-WFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSF 719

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRR---LEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +  L+ G   +  + +A  +F + L+      E S L    L+   CK  +    + ++D
Sbjct: 720 WEDLMGGTLVEAEMDKAI-IFAEELVLNGICREDSFLI--PLVRVLCKHKRELYAYQIFD 776

Query: 413 NMIKR-GLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
              K+ G+ P     + LI  L+       A   F     +   P+ F FN L+    + 
Sbjct: 777 KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKS 836

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            + T+  +L+  M     KPD IT+ ++I  +A   +L  A+  F+ ++     P   TY
Sbjct: 837 GKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTY 896

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
             +I GL K   +   + +F+ M   G  P+ AI+N+L+N   K  + + A +LF ++ +
Sbjct: 897 GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN 956

Query: 587 RGLEPDIITYNTIICGYC 604
            G+ PD+ +Y  ++   C
Sbjct: 957 EGIRPDLKSYTILVDCLC 974



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/551 (23%), Positives = 251/551 (45%), Gaps = 31/551 (5%)

Query: 67   IAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRD-SLGDFGCDYSFLIENYVRI 125
            +  LI  L ++   D A  +FD+M              +D  L      Y+ L+    + 
Sbjct: 545  VNSLIDSLYKAGRVDEAWQMFDRM--------------KDMKLSPTVVTYNTLLSGLGKE 590

Query: 126  GKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMR----GKGFC 179
            G++ +++E+F  M +     SP+ +    L+ C   ++ V    K+   M          
Sbjct: 591  GRVQKAIELFESMIEKKC--SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVL 648

Query: 180  VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF-DV 238
             Y  ++ GL+++  + +AF    Q +++   P+ VT   +L  L   GQIG+A S+  D 
Sbjct: 649  TYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDF 707

Query: 239  LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
            +  V  + N   +  L+     EA+++KA      ++   +  +      L+  L K  R
Sbjct: 708  MYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKR 767

Query: 299  LKEGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
                 ++      + G+   +  ++ ++   + +    +A   +  M N G  P+  +++
Sbjct: 768  ELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFN 827

Query: 358  ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +L+    + G++ E   L+ +++ RR +P  +TY+ +I    KS  L      + +++  
Sbjct: 828  MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 418  GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
              +P       LI+GL     + +A+R F +       PN  IFN L++G  ++      
Sbjct: 888  DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947

Query: 473  VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             +LF  M    I+PD+ ++T+L+  +   G +  A+  F ++   GL PD I Y+ II+G
Sbjct: 948  CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007

Query: 533  LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
            L K + +   L ++  M   G+ PD+  YN L+  L     ++ A +++ +L   GLEPD
Sbjct: 1008 LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067

Query: 593  IITYNTIICGY 603
            + TYN +I GY
Sbjct: 1068 VFTYNALIRGY 1078



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 241/549 (43%), Gaps = 36/549 (6%)

Query: 36   NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
            N +L+ L K      AI+ F+       SPN      L+    ++D  ++A  +F KM +
Sbjct: 581  NTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTV 640

Query: 93   QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESV--EIFAYMSDMGIYLSPDLV 150
                                C    L  N V  G I E+     F +   +   + PD V
Sbjct: 641  ------------------MDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHV 682

Query: 151  Q--RLMSCLVDSNSVGQYYKLCRA-MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQ 203
                L+  LV    +G    + R  M    F V    +E LM G L +  ++ A     +
Sbjct: 683  TICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEE 742

Query: 204  VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL-VGPKPNVVTFSTLINAFCKEA 262
            ++  G          +++ LC + +   A  +FD     +G  P + +++ LI    +  
Sbjct: 743  LVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVH 802

Query: 263  KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
              EKA+ L+  M  +   PD   +++L+    K+G++ E  EL    + R  K D + ++
Sbjct: 803  YTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYN 862

Query: 323  SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
             V+ +     ++ +A+  +  +++  F P   +Y  LI GL + GRL EA  LF ++   
Sbjct: 863  IVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY 922

Query: 383  RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDA 437
              +P+   ++ LI+G+ K G       L+  M+  G++PD    ++L++     G + +A
Sbjct: 923  GCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982

Query: 438  LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            L +F +     L P+   +N +++G  + +R  + + L+  M    I PD+ T+  L+  
Sbjct: 983  LYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLN 1042

Query: 498  IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
            +   G +  A  ++ ++   GL PDV TY+A+I G    +N      ++K M  +G  P+
Sbjct: 1043 LGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPN 1102

Query: 558  IAIYNVLLN 566
            I  Y  L N
Sbjct: 1103 IGTYAQLPN 1111


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 240/498 (48%), Gaps = 15/498 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +I  Y R+G  ++++++F  + + G   +  +   L+  L+  N       L   M+  G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174

Query: 178 FC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L+  L +   ++ A  +  ++  +G  P+ VT   ++  LC  G+I +A 
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L         KP+V  ++ LI+  CKE ++E A +L   MM+  + P+++ YS +I+ L
Sbjct: 235 ELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
             +G ++    L      RG   ++  F+ ++      G +  A+  +  M+  G  PNV
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ LI GLC  G L EA  +  Q+      P++ TYS LIDGF KSG L      ++ 
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSV--RMTL---IPNLFIFNTLMDGCCRLKR 468
           MI  G +P+ V  + +++ L  +++     S+  +MTL    PN   FNT + G C   R
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGR 469

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               +KL   M  +   P++ T+  L+  +        A  LF ++  R L P+++TY+ 
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD-R 587
           +++G  +   +   L +F      G APD   YN +++   K+  +  A +L  +++  +
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK 589

Query: 588 GLEPDIITYNTIICGYCS 605
              PDIITY ++I G C+
Sbjct: 590 EWHPDIITYTSLIWGACN 607



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 236/489 (48%), Gaps = 36/489 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++   +  ++D + ++F  MS+ G    PD V    ++S L  +  +    +L   
Sbjct: 182 YNILLKALCKNDRVDAAHKLFVEMSNKGC--PPDAVTYTTMVSSLCKAGKIDDARELAGR 239

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
            +     VY  L++G+ ++G IE A  +  +++  G  PN+V+ + I+  LC++G +  A
Sbjct: 240 FK-PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
            +LF  + L G   N+ TF+ LI       KL +A  L+ LM++    P+++ Y+ LI G
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L   G L+E  ++       G   +V  +S ++D +   GD+  A +T++RM++ G  PN
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V++Y+ ++  LC+     +A  L  ++ +    P+ +T+++ I G C +G++     L +
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLE 478

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            M   G                               +PN+  +N L+D   R+ +  + 
Sbjct: 479 RMQGHG------------------------------CLPNITTYNELLDALFRMNKYEEA 508

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             LF  +   N++P+++T+  ++ G +  G +  A+ LF + L RG  PD ITY+ +IH 
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568

Query: 533 LFKGKNISVGLHMF-KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             K   + +   +  ++       PDI  Y  L+       N++ A+    +  ++G+ P
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628

Query: 592 DIITYNTII 600
           +  T+N ++
Sbjct: 629 NFATWNALV 637



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 213/448 (47%), Gaps = 43/448 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM- 173
           Y+ LI+   + G+I+ ++++   M D G+   P++V    SC+++S  V    +L  A+ 
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGV--DPNVVS--YSCIINSLCVSGNVELAFALF 302

Query: 174 -----RGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
                RG    ++ F  L+ G   +G +  A  + + +IQ G  PN+V  N ++  LC N
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 362

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A  + D +   G  PNV T+S LI+ F K   L  A + +N M+     P+++ Y
Sbjct: 363 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + ++D L K     + N L+      G   + + F++ +    G G V  A++  +RM  
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 482

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G LPN+ +Y+ L+  L +  +  EA GLF ++  R L+P+L+TY++++ GF ++G + +
Sbjct: 483 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 542

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
              L+   + RG  PD++                               +NT++   C+ 
Sbjct: 543 ALQLFGKALVRGTAPDSIT------------------------------YNTMIHAYCKQ 572

Query: 467 KRATDTVKLF-MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            +     +L   +  M    PD+IT+T LI G  +  ++  A+    + + +G+ P+  T
Sbjct: 573 GKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNG 553
           ++A++   F        +H+   + R G
Sbjct: 633 WNALVRCFFDSLGHMGPIHILDDILRKG 660



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 10/255 (3%)

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +I G  + G   +A  +F ++     +P++  Y+ L+D      K +    LY NM K G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174

Query: 419 LKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           L P+    ++L+  L  +     A + F +       P+   + T++   C+  +  D  
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +L    G +  KP V  +  LI G+  +G +  AI L  +M+  G+ P+V++YS II+ L
Sbjct: 235 EL---AGRF--KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
               N+ +   +F  M   G   +I  +  L+        L  AL L+  +   G EP++
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349

Query: 594 ITYNTIICGYCSLNS 608
           + YNT+I G CS  S
Sbjct: 350 VAYNTLIHGLCSNGS 364



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 50/115 (43%)

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+ V+I  +  +  +     +  QM   G+      +  II+G  +  +    L MF  +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              G  P + IYN LL+ L+ E        L+  +   GL P++ TYN ++   C
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALC 190


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 220/424 (51%), Gaps = 10/424 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVI---QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           ++N ++++G    AF  +  V     +GF PN++T N I+K LC  GQI  A   F  + 
Sbjct: 166 VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMP 225

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L    P+V T+STL+N  CKE ++++A  L + M     +P+ + +++LID L K G L 
Sbjct: 226 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 285

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              +L+     +G   + V +++++      G + +A+   ++M++   +PN ++Y  +I
Sbjct: 286 RAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII 345

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GL +Q R  +   +   +  R  + +   YSSLI G  K GK  +   L+  M ++G K
Sbjct: 346 NGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCK 405

Query: 421 PDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ VV    I+GL  D     A     + +    +PN F +++LM G  +   +   + +
Sbjct: 406 PNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILV 465

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           +  M   +++ +V+  +VL+ G+   G L  A+ ++  ML  GL PDV+ YS++I GL  
Sbjct: 466 WKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCD 525

Query: 536 GKNISVGLHMFKLM--ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
             ++  GL +F  M  +     PD+  YN+L N L ++ NL  A+ L   + D G +PD 
Sbjct: 526 VGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDS 585

Query: 594 ITYN 597
           +T N
Sbjct: 586 LTCN 589



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 239/497 (48%), Gaps = 52/497 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+   ++G+ID +V+ F  M              L +C  D               
Sbjct: 201 YNLIIKALCKLGQIDRAVDTFREMP-------------LKNCNPD--------------- 232

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  LMNGL ++  ++ A  +  ++   G +PN VT N ++  L  NG +  A+ 
Sbjct: 233 ---VFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 289

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L D + L G  PN VT++TLI+  C + KL+KA  L   M+    VP+ + Y  +I+GL 
Sbjct: 290 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 349

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  R ++G  +L++  +RG K +  ++SS++      G    AV+ +  M   G  PNV+
Sbjct: 350 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 409

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y   I GLC+  +  EA  +  ++L +   P+  TYSSL+ GF K G  +    ++  M
Sbjct: 410 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 469

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + + ++ + V CS+L+NGL     + +AL  +   +   L P++  +++++ G C +   
Sbjct: 470 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSV 529

Query: 470 TDTVKLFMLMGMYNIK--PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
              +KLF  M     K  PDV+T+ +L   +  Q +L+ AI L   ML  G  PD +T +
Sbjct: 530 DKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN 589

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
             +  L +  N      +F             +  +++ +L +E  L +AL++  ++  R
Sbjct: 590 IFLETLRERINPPQDGRLF-------------LDELVVRLLKRERKL-SALRIVEEMLLR 635

Query: 588 GLEPDIITYNTIICGYC 604
            L P+  T++ +I   C
Sbjct: 636 FLPPEPSTWSRVIQRTC 652



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 189/387 (48%), Gaps = 36/387 (9%)

Query: 228 QIGNASSLFDVLLLV------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
           Q G+ S  F   L V      G +PN++T++ +I A CK  ++++A   +  M   +  P
Sbjct: 172 QEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNP 231

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+  YS L++GL K  R+ E   LL      G   + V F+ ++DA    GD+ RA +  
Sbjct: 232 DVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLV 291

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           D M   G +PN ++Y+ LI GLC +G+L +A  L  +++  +  P+ +TY ++I+G  K 
Sbjct: 292 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQ 351

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            +  DG  +  +M +RG K +  + S LI+GL  +                         
Sbjct: 352 RRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEG------------------------ 387

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
                 ++ + V+L+  M     KP+V+ +   I G+        A  +  +ML +G  P
Sbjct: 388 ------KSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP 441

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           +  TYS+++ G FK  +    + ++K M    +  ++   +VLLN L +   L  AL ++
Sbjct: 442 NAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW 501

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNS 608
             +   GL+PD++ Y+++I G C + S
Sbjct: 502 THMLGEGLKPDVVAYSSMIKGLCDVGS 528



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 152/354 (42%), Gaps = 62/354 (17%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI      GK+D+++ +   M       +      +++ LV          +  +M 
Sbjct: 306 YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSME 365

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G      +Y  L++GL ++G  ENA  + +++ ++G  PN+V     +  LC + +  
Sbjct: 366 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPD 425

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +   +L  G  PN  T+S+L+  F K+   +KA  ++  MM  D+  +++  S+L+
Sbjct: 426 EAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLL 485

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML--NGG 348
           +GL ++GRL+E   +    L  GLK DVV +SS++     +G V + ++ +  M      
Sbjct: 486 NGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPK 545

Query: 349 FLPNVISYSILIKGLCQQGRLVEA------------------CGLF-------------- 376
             P+V++Y+IL   LC+Q  L  A                  C +F              
Sbjct: 546 SRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDG 605

Query: 377 ------------------------GQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
                                    ++L+R L P   T+S +I   CK  ++R+
Sbjct: 606 RLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRE 659



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 174/408 (42%), Gaps = 61/408 (14%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           PK ++   + L  +  K A+L   F   +L +  +  PD      +   +FK+ R + G+
Sbjct: 26  PKFSIHQLNPLTISLHKPARLSPFFYFSSLPLSSNSTPDAQNELSISPQIFKS-RPQFGS 84

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI--LIK 361
                      KL    F  +++ Y    +     Q  DRM   G    V++ +I  LI 
Sbjct: 85  ----------YKLGDATFYRLIENYATSREFHFIHQVLDRMKREG---RVLTETIFILIF 131

Query: 362 GLCQQGRLV-EACGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI---K 416
             C +  L  EA   F ++      + ++ +++S+++   + G     F  Y ++     
Sbjct: 132 KACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANS 191

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           +G +P+ +  +L+I  L     +  A+  F +       P++F ++TLM+G C+ +R  +
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            V L   M      P+ +T  VLI  ++  G LS A  L   M  +G  P+ +TY+ +IH
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 311

Query: 532 GL-FKGK----------------------------------NISVGLHMFKLMERNGVAP 556
           GL  KGK                                      G+H+   ME  G   
Sbjct: 312 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 371

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  IY+ L++ L KE   + A++L+ ++ ++G +P+++ Y   I G C
Sbjct: 372 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLC 419


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 247/534 (46%), Gaps = 19/534 (3%)

Query: 100 FFRLFRD---SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-QRLMS 155
           F R+ R+    +    C Y+ LI  + R+G++      F  +   G  L+  ++  +L+ 
Sbjct: 77  FNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLK 136

Query: 156 CLVDSNSVGQYYK-LCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRG-- 208
            L D+  V +    L R M   G  +    Y  L+ GL  +   E A  +   +   G  
Sbjct: 137 GLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDG 196

Query: 209 -FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
              PN+VT   ++  LC    +  A  +F  ++  G +PN  T++ LI+ +    K ++ 
Sbjct: 197 SHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEV 256

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            Q+   M    L PD +IY++L+D L K GR  E   +  + + +G+K  V ++  ++  
Sbjct: 257 VQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHG 316

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y   G +       D M+  G  P+   ++I+     ++  + EA  +F ++  + L P 
Sbjct: 317 YATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPG 376

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++ Y +LID  CK G++ D    ++ MI  G+ PD  V S L+ GL        A + FF
Sbjct: 377 VVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFF 436

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           + +   +  N   FN LM   CR  R  +  +L  LM   +++PDVI++  L+ G    G
Sbjct: 437 EVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTG 496

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A  L   M+  GL PD  TY+ ++HG  K + I     +F+ M   G+ P +  YN
Sbjct: 497 RIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYN 556

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
            +L+ L +      A +L+  + +   + DI TY  I+ G C  N   +D  FK
Sbjct: 557 TILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNN--FVDEAFK 608



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/554 (25%), Positives = 252/554 (45%), Gaps = 29/554 (5%)

Query: 64  SPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE 120
           +PN+     +I  L ++ M D A  VF  M+ +  +  N               Y+ LI 
Sbjct: 199 TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNH-------------TYTCLIH 245

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
            Y+  GK  E V++   MS  G  L PD V    L+  L  +    +   +  ++  KG 
Sbjct: 246 GYLSTGKWKEVVQMLQEMSTHG--LQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGI 303

Query: 179 ----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                +Y  L++G   +G +         +++ G  P+    N +         I  A  
Sbjct: 304 KPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMH 363

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +FD +      P VV +  LI+A CK  +++ A   +N M+   + PD+ ++S L+ GL 
Sbjct: 364 IFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLC 423

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
              + ++  +L    LD+G++L+   F+ +M      G V  A +  D ML     P+VI
Sbjct: 424 TVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVI 483

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           SY+ L+ G C  GR+ EA  L   ++   L+P   TY++L+ G+CK+ ++ D +SL+  M
Sbjct: 484 SYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREM 543

Query: 415 IKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           + +GL P  V  + +++GL       +A   +   +      +++ +  +++G CR    
Sbjct: 544 LMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFV 603

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  K+F  +   +++ D+ T  ++I  +   G    A+ LF  +   GL PDV TY  I
Sbjct: 604 DEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLI 663

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
              L K  ++     +F  ME NG AP+  + N L+  L+   ++  A     +L ++  
Sbjct: 664 AENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNF 723

Query: 590 EPDIITYNTIICGY 603
             +  T + +I  Y
Sbjct: 724 SLEASTTSMLISIY 737


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 250/515 (48%), Gaps = 41/515 (7%)

Query: 113 CDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC 170
           C Y++  +I  Y   G+ + + ++   + + G   S      +++CL     V +   L 
Sbjct: 321 CAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF 380

Query: 171 RAMRGKG---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            AM+         Y  +++ L   G +E A+ +  ++   G  PN++T N ++ RLC   
Sbjct: 381 EAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAK 440

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A  +F+     G  PN VT+ +LI+   K+  ++ A++L+  M++     + ++Y+
Sbjct: 441 KFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYT 500

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI   F  GR ++G+++      RG + D+ + ++ MD     GDV +    ++ +   
Sbjct: 501 SLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGY 560

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GFLP+V SYSILI GL + G+  E   +F  +  +        Y++++DGFCKSGKL   
Sbjct: 561 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKA 620

Query: 408 FSLYDNM-IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + + + M +KR                               + P +  + +++DG  ++
Sbjct: 621 YEVLEEMKVKR-------------------------------VPPTVATYGSIIDGLAKI 649

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  +   LF       I+ +VI ++ LI G    G +  A L+  +M+K+GLTP+V T+
Sbjct: 650 DRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 709

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           ++++  L K + I+  L  F+ M+    +P+   Y++L+N L +    + A   + ++  
Sbjct: 710 NSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQK 769

Query: 587 RGLEPDIITYNTIICGYCSL----NSCLIDGYFKS 617
           +GL P+++TY T+I G   +    ++C +   FK+
Sbjct: 770 QGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKA 804



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 239/483 (49%), Gaps = 10/483 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+     GK++E+  I   M   G++ +   V  ++  L  +      Y++     
Sbjct: 394 YNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETAS 453

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L++GL +KG +++A+ +   ++  G   N V    +++   ++G+  
Sbjct: 454 QRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKE 513

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +   +F  +   G +P++   +T ++   K   +EK   ++  +     +PD+  YSILI
Sbjct: 514 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 573

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL KAG+ +E + +      +G  LD   +++V+D +   G + +A +  + M      
Sbjct: 574 HGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVP 633

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P V +Y  +I GL +  RL EA  LF +   + +E +++ YSSLIDGF K G++ + + +
Sbjct: 634 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            + M+K+GL P+    + L++ L     + +AL  F     M   PN + ++ L++G CR
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCR 753

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           +++       +  M    + P+V+T+T +I G+A  G+++ A  LF +    G TPD  +
Sbjct: 754 VQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAAS 813

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK-ECNLDAALKLFGQL 584
           ++A+I G+          H+F+     G   ++     LL+ L K EC   AA+  FG+ 
Sbjct: 814 FNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVVGFGEN 873

Query: 585 TDR 587
           T R
Sbjct: 874 TVR 876



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 151/608 (24%), Positives = 264/608 (43%), Gaps = 70/608 (11%)

Query: 47  NPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVAS--HVFDKM-VIQFGKTYNFFRL 103
           NP+ A  FF  +      P  A   + +L     D+A+   V ++M V+ +G        
Sbjct: 93  NPSLAAPFFLASSAASPHPLPADAYNAVLPFLSHDLAAMEKVLEEMSVLGYG-------- 144

Query: 104 FRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
               + +  C  + L+   VR  ++D++  + A M  +    +      L+  + ++   
Sbjct: 145 ----VPNPAC--ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQP 198

Query: 164 GQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            +  +L R M+  G+ V    +  L+  L R+G +E A  +  +V      P+IV  N  
Sbjct: 199 ERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYN-- 256

Query: 220 LKRLCIN--GQIGN---ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
              +CI+  G+ GN   A   F  L   G KP+ V+++++I   CK  +L +A +L+  M
Sbjct: 257 ---VCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQM 313

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM--------- 325
                VP    Y+ +I G   AG+ +   +LL    +RG    VV F+S++         
Sbjct: 314 ETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKV 373

Query: 326 -------------------------DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
                                    D     G V  A    D M + G  PN+++ +I++
Sbjct: 374 DEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMV 433

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC+  +   A  +F     R   P+ +TY SLIDG  K G + D + L++NM+  G  
Sbjct: 434 DRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHN 493

Query: 421 PDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            + VV + LI     +G   D  + F +  R    P+L + NT MD   +         +
Sbjct: 494 ANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAI 553

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  +  Y   PDV ++++LI G+   G       +F  M ++G   D   Y+A++ G  K
Sbjct: 554 FEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCK 613

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +     + + M+   V P +A Y  +++ L K   LD A  LF +   +G+E ++I 
Sbjct: 614 SGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIV 673

Query: 596 YNTIICGY 603
           Y+++I G+
Sbjct: 674 YSSLIDGF 681



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 183/398 (45%), Gaps = 18/398 (4%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           +F   Y  F    ++    GC+     Y  LI+   + G +D++  +F  M D G   +P
Sbjct: 441 KFEPAYEMF----ETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQ 203
            +   L+            +K+ + M  +G      +    M+ + + G +E    +   
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +   GF+P++ + + ++  L   GQ    SS+F  +   G   +   ++ +++ FCK  K
Sbjct: 557 IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGK 616

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L+KA+++   M    + P +  Y  +IDGL K  RL E   L   A  +G++L+V+V+SS
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 676

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D +  +G +  A    + M+  G  PNV +++ L+  L +   + EA   F  +   +
Sbjct: 677 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK 736

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
             P+  TYS LI+G C+  K    F  +  M K+GL P+ V  + +I GL     + DA 
Sbjct: 737 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDAC 796

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
             F +       P+   FN L++G     RA +   +F
Sbjct: 797 SLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVF 834



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 79/182 (43%)

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           +V +L+    + DA R      R+   P    +  L+      ++    ++L   M    
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
            +  V   T L+R +A +G +  A+ L  ++    L PD++ Y+  I    K  N+ +  
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             F  ++  G+ PD   Y  ++ +L K   L  A +LFGQ+      P    YNT+I GY
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 604 CS 605
            S
Sbjct: 333 GS 334


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 230/452 (50%), Gaps = 7/452 (1%)

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR--KGVIENAFHMHRQVIQRGFVPNIVTCN 217
           +N V  ++++ R         +  ++  +++        A  +  Q+  +G  P IVT N
Sbjct: 39  NNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFN 98

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++   C  G++  A S+F  +L +G  P  +TF+TLIN  C   KL++A   ++ ++ +
Sbjct: 99  ILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIAL 158

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
               D + Y  LI+GL K G  +   ++L     + +  DVV+++ ++++      V  A
Sbjct: 159 GFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDA 218

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            Q Y  M+     P+V++++ LI G C  G+L EA GLF +++++ + P + T+S L+D 
Sbjct: 219 YQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDA 278

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
            CK G +    ++   M+K+G+ PD V  S L++G      +  A   F    R+ + P+
Sbjct: 279 LCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPH 338

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              +N +++G  ++K   + + LF  M    I PD +T+  LI G+   G +S A  L  
Sbjct: 339 AHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVD 398

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M   G+  D++TY+++I  L K  +I   + + K ++  G+ P +  YN+L++ L K  
Sbjct: 399 EMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGG 458

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L  A  +F  L  +G   +  TYN +I G C
Sbjct: 459 RLKNAQDVFQDLLIKGYSVNAWTYNIMINGLC 490



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 224/433 (51%), Gaps = 15/433 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L+  Y  +G++  +  IFA +  +G + +      L++ +  +  + +       + 
Sbjct: 97  FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVI 156

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF +    Y  L+NGL + G    A  M +++  +    ++V  N I+  LC +  + 
Sbjct: 157 ALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVS 216

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  L+  ++     P+VVTF++LI  FC   +L++AF L++ M+  ++ PD+  +SIL+
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L K G +     +L   + +G+  DVV +SS+MD Y  + +V +A   +  M   G  
Sbjct: 277 DALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVA 336

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  SY+I+I GL +   + EA  LF ++  + + P  +TY+SLIDG CK G++   + L
Sbjct: 337 PHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQL 396

Query: 411 YDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC- 464
            D M   G+  D +  + LI     N  +  A+    +     + P+++ +N L+DG C 
Sbjct: 397 VDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCK 456

Query: 465 --RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             RLK A D  +  ++ G Y++  +  T+ ++I G+  +G  + A +L  +M   G+ PD
Sbjct: 457 GGRLKNAQDVFQDLLIKG-YSV--NAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPD 513

Query: 523 VITYSAIIHGLFK 535
            +TY  II  LF+
Sbjct: 514 AVTYETIIRALFR 526



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 185/348 (53%), Gaps = 17/348 (4%)

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD-------RGLKLDVVVFSS 323
           ++ M+ M   P ++ ++ ++  + KA      N    TA+        +G+   +V F+ 
Sbjct: 45  FHRMLRMRPTPSIVEFNKILGSIVKAN-----NNHYTTAISLSHQLELKGITPTIVTFNI 99

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           +++ Y  +G++  A   + ++L  G+ P  I+++ LI G+C  G+L EA      V+   
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
                ++Y +LI+G CK G+ R    +   +  + +  D V+ +++IN L     + DA 
Sbjct: 160 FHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAY 219

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           + + + +   + P++  FN+L+ G C + +  +   LF  M + NI PDV T ++L+  +
Sbjct: 220 QLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDAL 279

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G+++ A  +   M+K+G+ PDV+TYS+++ G      ++   H+F  M R GVAP  
Sbjct: 280 CKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHA 339

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             YN+++N L K   +D AL LF ++  +G+ PD +TYN++I G C L
Sbjct: 340 HSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKL 387



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 149/283 (52%), Gaps = 7/283 (2%)

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ--QGRLVEACGLFGQVLIRRLEPSLLT 390
           DV   V ++ RML     P+++ ++ ++  + +        A  L  Q+ ++ + P+++T
Sbjct: 37  DVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVT 96

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           ++ L++ +C  G++   FS++  ++K G  P  +  + LING+     + +AL F    +
Sbjct: 97  FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVI 156

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
            +    +   + TL++G C++      +++   +    +  DV+ + ++I  +    ++S
Sbjct: 157 ALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVS 216

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  L+ +M+ + ++PDV+T++++I G      +     +F  M    + PD+  +++L+
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           + L K+ N+  A  +   +  +G+ PD++TY++++ GYC +N 
Sbjct: 277 DALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNE 319



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 152/314 (48%), Gaps = 19/314 (6%)

Query: 86  VFDKMVIQF---GKTYNFFRLFRD-SLGDFGCD---YSFLIENYVRIGKIDESVEIFAYM 138
            F+ +++ F   G+    F LF +  L +   D   +S L++   + G I  +  + A M
Sbjct: 236 TFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVM 295

Query: 139 SDMGIYLSPDLV--QRLMS--CLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLR 190
              G+   PD+V    LM   CLV  N V +   +   M   G       Y  ++NGL +
Sbjct: 296 MKQGVI--PDVVTYSSLMDGYCLV--NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGK 351

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
             +++ A  + +++  +G  P+ VT N ++  LC  G+I  A  L D +   G   +++T
Sbjct: 352 IKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILT 411

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           +++LI+  CK   ++KA  L   + +  + P +  Y+ILIDGL K GRLK   ++    L
Sbjct: 412 YNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL 471

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
            +G  ++   ++ +++     G    A     +M N G +P+ ++Y  +I+ L ++    
Sbjct: 472 IKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENE 531

Query: 371 EACGLFGQVLIRRL 384
           +A  L  +++IR L
Sbjct: 532 KAEKLLREMIIRGL 545



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 8/223 (3%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCL 157
           F  + R  +      Y+ +I    +I  +DE++ +F  M   GI  +PD V    L+  L
Sbjct: 327 FSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGI--APDTVTYNSLIDGL 384

Query: 158 VDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
                +   ++L   M   G       Y  L++ L +   I+ A  + +++  +G  P++
Sbjct: 385 CKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSM 444

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T N ++  LC  G++ NA  +F  LL+ G   N  T++ +IN  CKE    +A  L + 
Sbjct: 445 YTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSK 504

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           M    ++PD + Y  +I  LF+    ++  +LL   + RGL L
Sbjct: 505 MENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLLL 547



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 114/240 (47%), Gaps = 4/240 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS L++ Y  + +++++  +F+ MS +G+         +++ L     V +   L + M 
Sbjct: 307 YSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMC 366

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++GL + G I  A+ +  ++   G   +I+T N ++  LC N  I 
Sbjct: 367 CKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHID 426

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +L   +   G +P++ T++ LI+  CK  +L+ A  ++  ++      +   Y+I+I
Sbjct: 427 KAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMI 486

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K G   E   LL    + G+  D V + +++ A     +  +A +    M+  G L
Sbjct: 487 NGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 240/498 (48%), Gaps = 15/498 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +I  Y R+G  ++++++F  + + G   +  +   L+  L+  N       L   M+  G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174

Query: 178 FC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L+  L +   ++ A  +  ++  +G  P+ VT   ++  LC  G+I +A 
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L         KP+V  ++ LI+  CKE ++E A +L   MM+  + P+++ YS +I+ L
Sbjct: 235 ELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
             +G ++    L      RG   ++  F+ ++      G +  A+  +  M+  G  PNV
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ LI GLC  G L EA  +  Q+      P++ TYS LIDGF KSG L      ++ 
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSV--RMTL---IPNLFIFNTLMDGCCRLKR 468
           MI  G +P+ V  + +++ L  +++     S+  +MTL    PN   FNT + G C   R
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGR 469

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               +KL   M  +   P++ T+  L+  +        A  LF ++  R L P+++TY+ 
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD-R 587
           +++G  +   +   L +F      G APD   YN +++   K+  +  A +L  +++  +
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK 589

Query: 588 GLEPDIITYNTIICGYCS 605
              PDIITY ++I G C+
Sbjct: 590 EWHPDIITYTSLIWGACN 607



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 236/489 (48%), Gaps = 36/489 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++   +  ++D + ++F  MS+ G    PD V    ++S L  +  +    +L   
Sbjct: 182 YNILLKALCKNDRVDAAHKLFVEMSNKGC--PPDAVTYTTMVSSLCKAGKIDDARELAGR 239

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
            +     VY  L++G+ ++G IE A  +  +++  G  PN+V+ + I+  LC++G +  A
Sbjct: 240 FK-PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
            +LF  + L G   N+ TF+ LI       KL +A  L+ LM++    P+++ Y+ LI G
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L   G L+E  ++       G   +V  +S ++D +   GD+  A +T++RM++ G  PN
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V++Y+ ++  LC+     +A  L  ++ +    P+ +T+++ I G C +G++     L +
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLE 478

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            M   G                               +PN+  +N L+D   R+ +  + 
Sbjct: 479 RMQGHG------------------------------CLPNITTYNELLDALFRMNKYEEA 508

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             LF  +   N++P+++T+  ++ G +  G +  A+ LF + L RG  PD ITY+ +IH 
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568

Query: 533 LFKGKNISVGLHMF-KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             K   + +   +  ++       PDI  Y  L+       N++ A+    +  ++G+ P
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628

Query: 592 DIITYNTII 600
           +  T+N ++
Sbjct: 629 NFATWNALV 637



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 213/448 (47%), Gaps = 43/448 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM- 173
           Y+ LI+   + G+I+ ++++   M D G+   P++V    SC+++S  V    +L  A+ 
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGV--DPNVVS--YSCIINSLCVSGNVELAFALF 302

Query: 174 -----RGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
                RG    ++ F  L+ G   +G +  A  + + +IQ G  PN+V  N ++  LC N
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 362

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A  + D +   G  PNV T+S LI+ F K   L  A + +N M+     P+++ Y
Sbjct: 363 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + ++D L K     + N L+      G   + + F++ +    G G V  A++  +RM  
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQG 482

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G LPN+ +Y+ L+  L +  +  EA GLF ++  R L+P+L+TY++++ GF ++G + +
Sbjct: 483 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 542

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
              L+   + RG  PD++                               +NT++   C+ 
Sbjct: 543 ALQLFGKALVRGTAPDSIT------------------------------YNTMIHAYCKQ 572

Query: 467 KRATDTVKLF-MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            +     +L   +  M    PD+IT+T LI G  +  ++  A+    + + +G+ P+  T
Sbjct: 573 GKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNG 553
           ++A++   F        +H+   + R G
Sbjct: 633 WNALVRCFFDSLGHMGPIHILDDILRKG 660



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 10/255 (3%)

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +I G  + G   +A  +F ++     +P++  Y+ L+D      K +    LY NM K G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174

Query: 419 LKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           L P+    ++L+  L  +     A + F +       P+   + T++   C+  +  D  
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +L    G +  KP V  +  LI G+  +G +  AI L  +M+  G+ P+V++YS II+ L
Sbjct: 235 EL---AGRF--KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
               N+ +   +F  M   G   +I  +  L+        L  AL L+  +   G EP++
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349

Query: 594 ITYNTIICGYCSLNS 608
           + YNT+I G CS  S
Sbjct: 350 VAYNTLIHGLCSNGS 364



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 50/115 (43%)

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+ V+I  +  +  +     +  QM   G+      +  II+G  +  +    L MF  +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              G  P + IYN LL+ L+ E        L+  +   GL P++ TYN ++   C
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALC 190


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 264/575 (45%), Gaps = 53/575 (9%)

Query: 86  VFDKMVIQFGK------TYNFFRLFRDS---LGDFGCDYSFLIENYVRIGKIDESVEIFA 136
            ++ M++ + K       + +FRL R+S   +  + C+   L+  Y R G + ++  +  
Sbjct: 185 TYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCN--ALLLGYCRTGDLRKACWLLM 242

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKG 192
            M  MG   +      L+  L ++  V +   L   M   G       Y  L+ GL ++G
Sbjct: 243 MMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEG 302

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI-----------GN---------- 231
            I +A  +  ++ +RG VP++ T N ++   C +G++           GN          
Sbjct: 303 RIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYN 362

Query: 232 -------------ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
                        A  L +  +  G  P V+TF+ +IN +CK  K++ A ++ ++M+   
Sbjct: 363 SLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSK 422

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
              DL  Y +LI  L K  RLKE  + L      GL  +VV+++S++DAY  +G VG A+
Sbjct: 423 CKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAAL 482

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           + +    + G  PN  +YS LI GL Q  +L +A  L  ++    + P ++TY++LI G 
Sbjct: 483 EVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQ 542

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLIPNLFIF 456
           CK  +  + F L++ M + GL PD    ++L + L   G A   +   V+  ++     +
Sbjct: 543 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTY 602

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            +L+DG  +         L   M     K D  T++VL++ +  Q  L+ A+ +  QM  
Sbjct: 603 TSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTL 662

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           RG+  +++ Y+ II  + K         MF  M  +G  P    Y V ++   K   ++ 
Sbjct: 663 RGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEE 722

Query: 577 ALKLFGQLTDRGLEPDIITYNTII--CGYCSLNSC 609
           A  L G++   G+ PD++TYN  I  CG+     C
Sbjct: 723 AGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDC 757



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 241/525 (45%), Gaps = 48/525 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I  Y +  KID+++ + + M      L       L+S L+  + + +       + 
Sbjct: 395 FTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIF 454

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      +Y  +++   + G +  A  + +     G  PN  T + ++  L  + ++ 
Sbjct: 455 ANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLH 514

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +L   +   G  P V+T++TLI   CK+ + + AF+L+ +M +  L PD   Y++L 
Sbjct: 515 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 574

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L K+GR +E    L+    +G+ L  V ++S++D +   G+   A    ++M+N G  
Sbjct: 575 DALCKSGRAEEAYSFLV---KKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCK 631

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +  +YS+L++ LC+Q +L EA  +  Q+ +R ++ +++ Y+ +I    K GK     S+
Sbjct: 632 ADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSM 691

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC-- 463
           ++ MI  G KP A+  ++ I+     G + +A     +  R  + P++  +N  ++GC  
Sbjct: 692 FNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGH 751

Query: 464 --------CRLKRATDT------------VKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                     LKR  D             +K F+ M + N       H V   G+ +   
Sbjct: 752 MGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLAN------AHYVDTSGMWNWIK 805

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L +   L  +M+K GL P  +TYS+II G  K   +     +   M    ++P+  IY  
Sbjct: 806 LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIY-- 863

Query: 564 LLNMLIKECN----LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              MLIK C      + A      + + G +P + +Y+ +I G C
Sbjct: 864 --TMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLC 906



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 227/502 (45%), Gaps = 51/502 (10%)

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMR---GKGFCV----YEFLMNGLLRKGVIENAFHMH 201
           LV  ++SC   +  + +     +A+R   GK   +    Y   +  LLR  + E+   ++
Sbjct: 112 LVVSMISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLY 171

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            Q++Q G +P+ VT N ++   C  G +  A   F +L   G + +  T + L+  +C+ 
Sbjct: 172 SQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRT 231

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
             L KA  L  +M  M    +   Y+ILI GL +   ++E   LLL  L  G   ++  +
Sbjct: 232 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTY 291

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           + ++      G +  A    D M   G +P+V +Y+ +I G C+ GRL +A G+   +  
Sbjct: 292 TLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEG 351

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
               P   TY+SLI G C  GK  +   L +  I RG  P  +  + +ING      + D
Sbjct: 352 NGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDD 410

Query: 437 ALR----------------------FFFQSVRMT-------------LIPNLFIFNTLMD 461
           ALR                         +  R+              L PN+ I+ +++D
Sbjct: 411 ALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIID 470

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C++ +    +++F L      +P+  T++ LI G+     L  A+ L  +M + G+TP
Sbjct: 471 AYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITP 530

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            VITY+ +I G  K         +F++ME+NG+ PD   YNVL + L   C    A + +
Sbjct: 531 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDAL---CKSGRAEEAY 587

Query: 582 GQLTDRGLEPDIITYNTIICGY 603
             L  +G+    +TY +++ G+
Sbjct: 588 SFLVKKGVVLTKVTYTSLVDGF 609



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/512 (22%), Positives = 206/512 (40%), Gaps = 63/512 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+ Y ++GK+  ++E+F      G   +      L+  L+    + +   L   M+
Sbjct: 465 YTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 524

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G  +K   +NAF +   + Q G  P+    N +   LC +G+  
Sbjct: 525 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR-- 582

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   +  L+  G     VT+++L++ F K    E A  L   M+      D   YS+L+
Sbjct: 583 -AEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLL 641

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K  +L E   +L     RG+K ++V ++ ++   +  G    A   ++ M++ G  
Sbjct: 642 QALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK 701

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS------------------ 392
           P+ I+Y++ I   C+ GR+ EA  L G++    + P ++TY+                  
Sbjct: 702 PSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFST 761

Query: 393 --SLIDGFCK--------------------------SG-----KLRDGFSLYDNMIKRGL 419
              +ID  C+                          SG     KL   + L + M+K GL
Sbjct: 762 LKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGL 821

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P AV  S +I G      + +A       +   + PN  I+  L+  CC +K       
Sbjct: 822 NPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAAS 881

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
               M     +P + ++  LI G+  +G    A  LF  +L+     + + +  +  GL 
Sbjct: 882 FVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLL 941

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           K  ++ +   +   ME      D   Y+++ N
Sbjct: 942 KAGHVDICSQLLSAMENRHCRIDSETYSMVTN 973



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 93/422 (22%), Positives = 171/422 (40%), Gaps = 27/422 (6%)

Query: 39  LANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTY 98
           L  +++ N  TP  Q +    + +     A+  +  L      +    +  +V  F K  
Sbjct: 554 LFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAG 613

Query: 99  N--FFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           N  F     + + + GC      YS L++   +  K++E++ I   M+  G+  +     
Sbjct: 614 NTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYT 673

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            ++S ++          +   M   G       Y   ++   + G IE A H+  ++ + 
Sbjct: 674 IIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERN 733

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA----- 262
           G  P++VT N  +      G +  A S    ++    +PN  T+  L+  F K +     
Sbjct: 734 GVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAH 793

Query: 263 -----------KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
                      KL+  +QL   M++  L P  + YS +I G  KA RL+E   LL   L 
Sbjct: 794 YVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLG 853

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           + +  +  +++ ++     I    +A      M+  GF P++ SY  LI GLC +G   +
Sbjct: 854 KDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDK 913

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  LF  +L      + + +  L DG  K+G +     L   M  R  + D+   S++ N
Sbjct: 914 AKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTN 973

Query: 432 GL 433
            +
Sbjct: 974 NI 975



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLI-DGYFK 616
           YN+ L  L++    +   KL+ QL   GL PD +TYNT+I  YC   S  I   YF+
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFR 207


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 246/498 (49%), Gaps = 14/498 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           YS +I  +   G+  ++  +F  M+  G+   PD+V    ++  L  + ++ +   + R 
Sbjct: 268 YSTVIHGFFNEGETGKACSLFHEMTRQGV--KPDVVTYNLIIDALCKARAMDKAELVLRQ 325

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  +++G    G ++ A  M R++ +RG +PNIVTCN  L  LC +G+
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGR 385

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A+  FD +   G KP++ ++ TL++ +  E        L+N M    +  +  +++I
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTI 445

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    K G + +   +      +G+  DVV +S+V+  +  +G +  A++ +++M+  G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARG 505

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL-EPSLLTYSSLIDGFCKSGKLRDG 407
             PN   YS +I+G C  G LV+A  L  +++ + +  P ++ +SS+I+  CK G++ D 
Sbjct: 506 IQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDA 565

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             ++D     G +P  +  + LI+G      M  A +       + + P++  +NTL+DG
Sbjct: 566 HDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDG 625

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +  R  D + LF  M    +KP+ +T+ +++ G+   G   +A   F +M++ G T  
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVT 685

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V  Y  I+ GL +       + +F+ +    V   I I N ++N + K    + A +LF 
Sbjct: 686 VSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFA 745

Query: 583 QLTDRGLEPDIITYNTII 600
            ++  GL P+  TY  +I
Sbjct: 746 TISASGLLPNESTYGVMI 763



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/539 (24%), Positives = 249/539 (46%), Gaps = 17/539 (3%)

Query: 79  MRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVE 133
           M  + ++   K +    +T     +    + + GC      YS +++          +++
Sbjct: 190 MDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALD 249

Query: 134 IFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNG 187
           +   M+  G   SPD+V    ++    +    G+   L   M  +G       Y  +++ 
Sbjct: 250 LLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDA 309

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L +   ++ A  + RQ+   G  P+ VT + ++      G++  A+ +F  +   G  PN
Sbjct: 310 LCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPN 369

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           +VT ++ + + CK  + ++A + ++ M      PD+  Y  L+ G    G   +   L  
Sbjct: 370 IVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFN 429

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
           +    G+  +  VF+ ++ AY   G V  A+  +  M   G  P+V++YS +I    + G
Sbjct: 430 SMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMG 489

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL-KPD---- 422
           RL +A   F Q++ R ++P+   YSS+I GFC  G L     L   MI +G+ +PD    
Sbjct: 490 RLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFF 549

Query: 423 -AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
            +V+ SL  +G + DA   F  +  +   P +  FN+L+DG C + +     K+   M +
Sbjct: 550 SSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             ++PD++T+  L+ G    G ++  + LF +M ++G+ P+ +TY  ++ GLF+      
Sbjct: 610 VGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVA 669

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               F  M  +G    ++IY ++L  L +    D A+ LF +L    ++  I   NT+I
Sbjct: 670 ARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMI 728



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 240/496 (48%), Gaps = 14/496 (2%)

Query: 127 KIDESVEIFAY-MSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG------FC 179
           + +E+V +  + MS++G   +      ++  L D++   +   L + M  +G        
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVV 266

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++G   +G    A  +  ++ ++G  P++VT N I+  LC    +  A  +   +
Sbjct: 267 AYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQM 326

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +P+ VT+S +I+ +    +L++A +++  M +  L+P+++  +  +  L K GR 
Sbjct: 327 TTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRS 386

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE  E   +   +G K D+  + +++  Y   G     +  ++ M + G   N   ++IL
Sbjct: 387 KEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTIL 446

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I    ++G + +A  +F ++  + + P ++TYS++I  F + G+L D    ++ M+ RG+
Sbjct: 447 IHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGI 506

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLI------PNLFIFNTLMDGCCRLKRATDTV 473
           +P+  V S +I G          + +   +I      P++  F+++++  C+  R  D  
Sbjct: 507 QPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAH 566

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +F L      +P VIT   LI G    G +  A  +   M   G+ PD++TY+ ++ G 
Sbjct: 567 DIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGY 626

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           FK   I+ GL +F+ M+R GV P+   Y ++L  L +     AA K F ++ + G    +
Sbjct: 627 FKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTV 686

Query: 594 ITYNTIICGYCSLNSC 609
             Y  I+ G C  N+C
Sbjct: 687 SIYGIILGGLCR-NNC 701



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 230/475 (48%), Gaps = 14/475 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS +I  Y  +G++ E+ ++F  M   G  L P++V     ++ L       +  +   +
Sbjct: 338 YSCMIHGYATLGRLKEAAKMFREMKKRG--LIPNIVTCNSFLASLCKHGRSKEAAEFFDS 395

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  L++G   +G   +   +   +   G   N      ++      G 
Sbjct: 396 MTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGM 455

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  +F  +   G  P+VVT+ST+I+ F +  +L  A + +N M+   + P+  +YS 
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSS 515

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGL-KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           +I G    G L +  EL+   +++G+ + D+V FSSV+++    G V  A   +D   + 
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDI 575

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P VI+++ LI G C  G++ +A  +   + +  +EP ++TY++L+DG+ K+G++ DG
Sbjct: 576 GERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDG 635

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDG 462
            +L+  M ++G+KP+ V   +++ GL        A + F + +       + I+  ++ G
Sbjct: 636 LTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGG 695

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            CR   A + + LF  +G  N+K  +     +I  +        A  LF  +   GL P+
Sbjct: 696 LCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPN 755

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
             TY  +I  L K   +    +MF  ME++G+ P   + N ++ ML+++  +  A
Sbjct: 756 ESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 199/404 (49%), Gaps = 9/404 (2%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           VP   T N ++   C   +     +LF  +L  G K + +T +TL+   C   + E+A  
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213

Query: 270 -LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG--LKLDVVVFSSVMD 326
            L + M E+  VP+ + YSI++  L      +   +LL     +G     DVV +S+V+ 
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            +   G+ G+A   +  M   G  P+V++Y+++I  LC+   + +A  +  Q+     +P
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC-----SLLINGLMGDALRFF 441
             +TYS +I G+   G+L++   ++  M KRGL P+ V C     SL  +G   +A  FF
Sbjct: 334 DTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF 393

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
                    P++F + TL+ G        D + LF  M    I  +    T+LI   A +
Sbjct: 394 DSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKR 453

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +  A+L+F +M ++G++PDV+TYS +I    +   ++  +  F  M   G+ P+ A+Y
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGL-EPDIITYNTIICGYC 604
           + ++        L  A +L  ++ ++G+  PDI+ ++++I   C
Sbjct: 514 SSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLC 557



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 11/278 (3%)

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           +P   +Y+IL+   C+  R      LFG +L   L+   +T ++L+   C + +  +  +
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213

Query: 410 -LYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRM--TLIPNLFIFNTLMD 461
            L   M + G  P+AV  S+++     N +   AL       +      P++  ++T++ 
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G            LF  M    +KPDV+T+ ++I  +    ++  A L+  QM   G  P
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D +TYS +IHG      +     MF+ M++ G+ P+I   N  L  L K      A + F
Sbjct: 334 DTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF 393

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSCLID--GYFKS 617
             +T +G +PDI +Y T++ GY S   C  D  G F S
Sbjct: 394 DSMTAKGHKPDIFSYCTLLHGYAS-EGCFADMIGLFNS 430



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 35/345 (10%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKM-VI 92
           +A  +++ +I    P P I FF    N +          V+   D+ D+A+ + ++  VI
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFSSVINSLCKDG-----RVMDAHDIFDLATDIGERPGVI 582

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
            F                       LI+ Y  +GK+D++ +I   M  +G+   PD+V  
Sbjct: 583 TFNS---------------------LIDGYCLVGKMDKAFKILDAMEVVGV--EPDIVTY 619

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L+     +  +     L R M+ KG       Y  ++ GL R G    A     ++I+
Sbjct: 620 NTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G    +     IL  LC N     A  LF  L  +  K ++   +T+INA  K  + E+
Sbjct: 680 SGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEE 739

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A +L+  +    L+P+   Y ++I  L K G +++ N +  +    G+     + + ++ 
Sbjct: 740 AKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIR 799

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
             +  G++ +A     ++     L    + S+++    ++G+  E
Sbjct: 800 MLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQE 844


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 248/497 (49%), Gaps = 10/497 (2%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
            C+Y   I    R  +I++ V +F  M    IY +      +   L     +G+     R
Sbjct: 133 ACNYMLEILREQR--RIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALR 190

Query: 172 AMRGKGFCVYEFLMNGLLR---KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            M   GF +  +  NGL+     G    A  +++++I  G  P++ T + ++  L   G 
Sbjct: 191 KMTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGD 250

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
                +L + +  +G +PN+ T++  I A  +  +++ A+ ++  M +    PD+I Y++
Sbjct: 251 TRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTV 310

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID L  AG+L +  EL +         D V + ++MD +  +GD+    + ++ M   G
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           + P+V++Y+ILI+ LC+ G +  A  +   +  + + P+L TY+++I G  K+ +L +  
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN--GLMGD---ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L +NM   G+KP A    L I+  G  GD   A+  F    +  ++P++   N  +   
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
               R ++   +F  +    + PD +T+ +L++  +  G +  A  L  +M+ +G  PDV
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +  +++I+ L+K   +     MF  ++   +AP +  YN+LL  L KE  +  AL+LFG 
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGS 610

Query: 584 LTDRGLEPDIITYNTII 600
           +T+ G  P+ IT+N+++
Sbjct: 611 MTESGCPPNTITFNSLL 627



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 226/496 (45%), Gaps = 18/496 (3%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG--- 177
              G+I E+ +IF  +   G  LSPD V    LM C   +  + +  +L   M  KG   
Sbjct: 491 AETGRISEAEDIFNDLHKCG--LSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEP 548

Query: 178 -FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
              +   L+N L + G ++ A+ M  ++      P +VT N +L  L   G+I  A  LF
Sbjct: 549 DVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELF 608

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             +   G  PN +TF++L++   K   ++ A +++  M  M+  PD++ Y+ +I GL + 
Sbjct: 609 GSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIRE 668

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL-PNVIS 355
           GR+          + + L  D V   +++   V  G V  A++     ++   L  N   
Sbjct: 669 GRIDYAF-WFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQF 727

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLI-RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +  L++ +  +  + EA   F ++L+   +         LI   CK  K  D  +++D  
Sbjct: 728 WGELMECILTEAEIEEAIS-FAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKF 786

Query: 415 IKR-GLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            K  G+ P     + L++GL+G      AL  F         PN F +N L+D   + KR
Sbjct: 787 TKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKR 846

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 L+  M     +P+ ITH ++I  +    +L+ A+ L+++++    +P   TY  
Sbjct: 847 INKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGP 906

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I GL K       + +F+ M   G  P+  IYN+L+N   K   +D A +LF ++   G
Sbjct: 907 LIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEG 966

Query: 589 LEPDIITYNTIICGYC 604
           + PD+ +Y  ++   C
Sbjct: 967 IRPDLKSYTILVECLC 982



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 141/604 (23%), Positives = 274/604 (45%), Gaps = 37/604 (6%)

Query: 36   NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMV- 91
            NA L  L +T   + A   F   H C  SP+      L+    ++   D A+ +  +M+ 
Sbjct: 484  NASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543

Query: 92   -----------------IQFGKTYNFFRLFRD----SLGDFGCDYSFLIENYVRIGKIDE 130
                              + G+    +++F       L      Y+ L+    + GKI +
Sbjct: 544  KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILK 603

Query: 131  SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL-CRAMR---GKGFCVYEFLMN 186
            ++E+F  M++ G   +      L+ CL  +++V    K+ CR            Y  ++ 
Sbjct: 604  ALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIY 663

Query: 187  GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA-SSLFDVLLLVGPK 245
            GL+R+G I+ AF    Q +++   P+ VT   ++  +  +G++ +A   + + +     +
Sbjct: 664  GLIREGRIDYAFWFFHQ-MKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQ 722

Query: 246  PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR-LKEGNE 304
             N   +  L+     EA++E+A     +++   +  D  +   LI  L K  + L   N 
Sbjct: 723  TNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNV 782

Query: 305  LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
                  + G+   +  ++ +MD  +G     +A++ ++ M + G  PN  +Y++L+    
Sbjct: 783  FDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHG 842

Query: 365  QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
            +  R+ +   L+ ++  R  EP+ +T++ +I    KS  L     LY  ++     P   
Sbjct: 843  KSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPC 902

Query: 425  VCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
                LI+GL+       A++ F + +     PN  I+N L++G  +        +LF  M
Sbjct: 903  TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM 962

Query: 480  GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                I+PD+ ++T+L+  +   G +  A+  F ++   GL PD ++Y+ II+GL K + +
Sbjct: 963  VKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRL 1022

Query: 540  SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
               L +F  M+  G++PD+  YN L+  L     +D A+K++ +L   GLEP + TYN +
Sbjct: 1023 DEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNAL 1082

Query: 600  ICGY 603
            I G+
Sbjct: 1083 IRGH 1086



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 135/547 (24%), Positives = 245/547 (44%), Gaps = 32/547 (5%)

Query: 36   NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
            N +L  L K      A++ F         PN      L+  L ++D  D+A  +F +M +
Sbjct: 589  NILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTM 648

Query: 93   QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ- 151
                         D L      Y+ +I   +R G+ID +   F +   M  +LSPD V  
Sbjct: 649  --------MNCNPDVL-----TYNTIIYGLIREGRIDYA---FWFFHQMKKFLSPDYVTL 692

Query: 152  -RLMSCLVDSNSVGQYYKLC-----RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVI 205
              L+  +V    V    K+      +A        +  LM  +L +  IE A      ++
Sbjct: 693  CTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILV 752

Query: 206  QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL-VGPKPNVVTFSTLINAFCKEAKL 264
                  +      ++K LC   +  +A ++FD     +G  P + +++ L++        
Sbjct: 753  CNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFT 812

Query: 265  EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
            EKA +L+  M      P+   Y++L+D   K+ R+ +  +L      RG + + +  + +
Sbjct: 813  EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872

Query: 325  MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
            + A V   ++ +A+  Y  +++G F P   +Y  LI GL + GR  +A  +F ++L    
Sbjct: 873  ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC 932

Query: 385  EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALR 439
             P+ + Y+ LI+GF KSG++     L+  M+K G++PD      +V  L I G + +A++
Sbjct: 933  GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992

Query: 440  FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            +F +     L P+   +N +++G  + +R  + + LF  M    I PD+ T+  LI  + 
Sbjct: 993  YFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLG 1052

Query: 500  SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
              G +  A+ ++ ++   GL P V TY+A+I G     N      +FK M   G +P+  
Sbjct: 1053 IAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTE 1112

Query: 560  IYNVLLN 566
             +  L N
Sbjct: 1113 TFAQLPN 1119



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 128/547 (23%), Positives = 232/547 (42%), Gaps = 56/547 (10%)

Query: 107 SLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVD 159
            + D GC      Y+ LI+     GK+D++ E++  M       SPD V    LM     
Sbjct: 295 EMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASS--HSPDRVTYITLMDKFGK 352

Query: 160 SNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
              +    +    M   G+      Y  L+  L + G ++ AF M   +  +G  PN+ T
Sbjct: 353 VGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHT 412

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N ++  L    ++  A  L + +  +G KP   ++   I+ + K     KA   +  M 
Sbjct: 413 YNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMK 472

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           +  ++P +   +  +  L + GR+ E  ++       GL  D V ++ +M  Y   G + 
Sbjct: 473 KRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQID 532

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           +A Q    M++ G  P+V+  + LI  L + GR+  A  +FG++   +L P+++TY+ L+
Sbjct: 533 KATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILL 592

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLI 450
            G  K GK+     L+ +M + G  P+ +  + L++ L  +     AL+ F +   M   
Sbjct: 593 TGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCN 652

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P++  +NT++ G  R  R       F  M  + + PD +T   LI G+   G +  AI +
Sbjct: 653 PDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKV 711

Query: 511 FFQ--------------------MLKRGLTPDVITYSAI----------------IHGLF 534
             +                    +L      + I+++ I                I  L 
Sbjct: 712 VMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLC 771

Query: 535 KGKNISVGLHMFKLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           K K      ++F    +N G+ P +  YN L++ L+     + AL+LF  +   G  P+ 
Sbjct: 772 KRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNN 831

Query: 594 ITYNTII 600
            TYN ++
Sbjct: 832 FTYNLLL 838



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 184/407 (45%), Gaps = 36/407 (8%)

Query: 70   LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
            LI VL +      A +VFDK     G           +L  + C    L++  +     +
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLG--------IHPTLESYNC----LMDGLLGSNFTE 813

Query: 130  ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLM 185
            +++E+F  M   G + +      L+     S  + + Y L   MR +G       +  ++
Sbjct: 814  KALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIII 873

Query: 186  NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
            + L++   +  A  ++ +++   F P   T   ++  L   G+   A  +F+ +L  G  
Sbjct: 874  SALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCG 933

Query: 246  PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG--- 302
            PN V ++ LIN F K  +++ A +L+  M++  + PDL  Y+IL++ L   GR+ E    
Sbjct: 934  PNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQY 993

Query: 303  -NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              EL LT LD     D V ++ +++       +  A+  +  M N G  P++ +Y+ LI 
Sbjct: 994  FEELKLTGLDP----DTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALIL 1049

Query: 362  GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
             L   G++  A  ++ ++ +  LEPS+ TY++LI G   SG     FS++  M+  G  P
Sbjct: 1050 HLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSP 1109

Query: 422  DAVVCSLLIN-----GLMGD-------ALRFFFQSVRMTLIPNLFIF 456
            +    + L N     GL+ +        L F F S+R+     +F F
Sbjct: 1110 NTETFAQLPNKYPRAGLVHNPFGAVFIGLFFIFTSIRLNQFYYIFRF 1156



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 39/290 (13%)

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS----ILIKGLCQQGRLVEA 372
           ++  + ++  A    G +GRA     +M   GF+ N  SY+    +L+ G C      EA
Sbjct: 165 NLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCN-----EA 219

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             ++ +++   ++PS+ TYS+L+    + G  R   +L + M   GL+P           
Sbjct: 220 LKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRP----------- 268

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
                              N++ +   +    R +R  D   +F  M      PDVIT+T
Sbjct: 269 -------------------NIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYT 309

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           VLI  + + G L  A  L+ +M     +PD +TY  ++    K  ++      +  ME +
Sbjct: 310 VLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVD 369

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           G APD+  Y +L+  L K  ++D A  +   +T +G+ P++ TYNT+ICG
Sbjct: 370 GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICG 419



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 57/104 (54%)

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G  + A+ ++ +M+  G+ P + TYSA++  L +  +    +++ + M+  G+ P+I  Y
Sbjct: 214 GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTY 273

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            + +  L +   +D A  +F ++ D G  PD+ITY  +I   C+
Sbjct: 274 TICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCA 317


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 248/504 (49%), Gaps = 14/504 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQYYKLCRAM 173
           +S LI+   + G  +++  +   +   G+  S    + ++  L +  NSV    K+   +
Sbjct: 116 FSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVV 175

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             KGF     ++  ++NG  +   +++A+ +   +I++G VPN+ T   ++  LC   ++
Sbjct: 176 IAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRV 235

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           G A  L + ++  G  PNVVT+ST+IN  CK+ +++ A++L+ LM   +  P+++ ++IL
Sbjct: 236 GEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNIL 295

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDGL KA R++E  +L     + G   D++ ++S++D       V  A Q +  +   G 
Sbjct: 296 IDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGV 355

Query: 350 -LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N ++YS L  G    GR+ +AC +F  ++ +   P L TY+SLI  +CK+ +  +  
Sbjct: 356 SAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVV 415

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L + M  +G  P     S ++ GL        A++ F          +  I+N +++G 
Sbjct: 416 ELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM 475

Query: 464 CRLKRATDTVK-LFMLMGMYNIK--PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
            R  +    +  L  ++   + K  P       L+  +   G    A  L  +M +RG  
Sbjct: 476 ARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFA 535

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
             V +Y+ ++ GL + +       +F+ M   G AP+I+  NV+++ L     +D A +L
Sbjct: 536 AAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYEL 595

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
             +++  G  PDI T NT+I GYC
Sbjct: 596 VQRMSKLGCCPDIETCNTLIGGYC 619



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 249/509 (48%), Gaps = 19/509 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           ++ L++     G++ E++E F  M+      +PD++    L+  L  +    +   + R 
Sbjct: 47  HTTLMKGLCDAGRVVEALEHFRAMAK---DCAPDVMTYTALVHALCKAGKFDEAQGMLRE 103

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN-G 227
           M  +G       +  L++GL + G  E AF +   VIQRG   +      I++RLC    
Sbjct: 104 MIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYN 163

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            +  AS +  V++  G  P V+ F+ +IN FCK   L+ A++L  +M+E   VP++  ++
Sbjct: 164 SVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFT 223

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ILI GL KA R+ E  +LL   +  G   +VV +S+V++     G V  A + +  M   
Sbjct: 224 ILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERR 283

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              PNV++++ILI GLC+  R+ EA  L+ ++      P ++TY+SLIDG CKS ++ + 
Sbjct: 284 NCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEA 343

Query: 408 FSLYDNMIKRGLK-PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
           F L+  + + G+   +AV  S L +G      M DA R F   V     P+L  + +L+ 
Sbjct: 344 FQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLIL 403

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C+  RA + V+L   M      P V T + ++ G+        AI LF  M  RG T 
Sbjct: 404 EYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTD 463

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLM---ERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           D + Y+ ++ G+ +    +  L + + +         P  +  + L+  L +    D A 
Sbjct: 464 DALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAK 523

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +L  ++++RG    + +YN ++ G   L 
Sbjct: 524 QLLHKMSERGFAAAVSSYNGLLSGLSRLQ 552



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 223/465 (47%), Gaps = 43/465 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+ G    G ++ A  +  ++   GF  N V    ++K LC  G++  A   F   
Sbjct: 11  TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRA- 69

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +     P+V+T++ L++A CK  K ++A  +   M+     PD + +S LIDGL K G  
Sbjct: 70  MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSE 129

Query: 300 KEGNELLLTALDRGL------------------------------------KLDVVVFSS 323
           ++   +L   + RG+                                       V++F+ 
Sbjct: 130 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 189

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           V++ +    D+  A +  + M+  G +PNV +++ILI GLC+  R+ EA  L  +++   
Sbjct: 190 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG 249

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALR 439
             P+++TYS++I+G CK G++ D + L+  M +R   P+ V  ++LI+GL      +  R
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309

Query: 440 FFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK-PDVITHTVLIRG 497
             +  +R T   P++  +N+L+DG C+  +  +  +LF  +    +   + +T++ L  G
Sbjct: 310 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 369

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
            A+ G ++ A  +F  ++ +G +PD+ TY+++I    K       + + + M   G  P 
Sbjct: 370 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 429

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +   + +L  L +  + + A++LF  +  RG   D + YN ++ G
Sbjct: 430 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG 474



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 158/318 (49%), Gaps = 42/318 (13%)

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +   GD+  A+Q  + M + GF  N + ++ L+KGLC  GR+VEA   F + + +   P 
Sbjct: 19  FSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF-RAMAKDCAPD 77

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-------------- 433
           ++TY++L+   CK+GK  +   +   MI RG  PD V  S LI+GL              
Sbjct: 78  VMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLE 137

Query: 434 ------MGDALRFF----------FQSVRMT-----------LIPNLFIFNTLMDGCCRL 466
                 MG++   F          + SV +              P + +FN +++G C+ 
Sbjct: 138 DVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKA 197

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           K      KL  +M      P+V T T+LI G+     +  A  L  +M+  G +P+V+TY
Sbjct: 198 KDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTY 257

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           S +I+GL K   +     +F+LMER    P++  +N+L++ L K   ++ A +L+ ++ +
Sbjct: 258 STVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE 317

Query: 587 RGLEPDIITYNTIICGYC 604
            G  PDIITYN++I G C
Sbjct: 318 TGCAPDIITYNSLIDGLC 335



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 7/228 (3%)

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRF----- 440
           P+  TY  LI GF  +G L     L + M   G + +AVV + L+ GL  DA R      
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLC-DAGRVVEALE 65

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
            F+++     P++  +  L+   C+  +  +   +   M      PD +T + LI G+  
Sbjct: 66  HFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF-KGKNISVGLHMFKLMERNGVAPDIA 559
            GS   A  +   +++RG+      +  II  L  K  ++ +   +  ++   G  P + 
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           ++N+++N   K  +LD+A KL   + ++G  P++ T+  +I G C  N
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKAN 233



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 1/123 (0%)

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P+  T+ +LIRG +S G L  AI L  +M   G   + + ++ ++ GL     +   L  
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           F+ M ++  APD+  Y  L++ L K    D A  +  ++  RG  PD +T++T+I G C 
Sbjct: 67  FRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 606 LNS 608
             S
Sbjct: 126 FGS 128



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/262 (20%), Positives = 104/262 (39%), Gaps = 44/262 (16%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFK--WTHNCVSSPNIAQL-IHVLLQSDMRDVASHVF 87
           + N  +A+L  L + N+   AIQ F       C     I  L +  + ++   + A  V 
Sbjct: 429 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVL 488

Query: 88  DKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           ++++ +  + +N      D+          L+E+  ++G+ D++ ++   MS+ G     
Sbjct: 489 EQVIDKRDRKFNPSSSAVDA----------LVESLCQVGRTDDAKQLLHKMSERGF---- 534

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
                                            Y  L++GL R    + A  +   ++  
Sbjct: 535 ---------------------------AAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSA 567

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P I T N ++  LC   ++ +A  L   +  +G  P++ T +TLI  +CK  + + A
Sbjct: 568 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLA 627

Query: 268 FQLYNLMMEMDLVPDLIIYSIL 289
            +L   M E  L P+   + +L
Sbjct: 628 RKLLEEMTEAGLEPNDTTHDLL 649


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 225/453 (49%), Gaps = 14/453 (3%)

Query: 124 RIGKIDESVEIFAYMSDM-GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVY- 181
           R GK D +  +FA + D  G   S  +   LM    DS  V    +  R +R   F +  
Sbjct: 130 RKGK-DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPF 188

Query: 182 ---EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
               +L++ ++        +  + ++++ GF P +   N ++ + C  G I +A  +F+ 
Sbjct: 189 HGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNE 248

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G +P  V+F+TLIN  CK   L++ F+L   M E  + PD+  YS+LI GL K GR
Sbjct: 249 IRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGR 308

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L    +L      RGL+ + + F++++D       +  A+ TY +ML  G  P+++ Y+ 
Sbjct: 309 LDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNT 368

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ GLC+ G + +A  L  ++ +  ++P  +TY++LIDG+CK G L     +   M + G
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           +  D V  + LI+G      + DA R   + V   + P+   +  ++DG C+        
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           KL   M +   KP VIT+ VL+ G+  QG + +A +L   ML  G+TPD ITY+ ++ G 
Sbjct: 489 KLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGH 548

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
            K         + KL    G+  D A Y  L++
Sbjct: 549 CKNGKAE---DLLKLRNEKGLIVDYAYYTSLVS 578



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 177/342 (51%), Gaps = 5/342 (1%)

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           +  Y+ ++E    P +  Y+ILI+   K G +++   +      RGL+   V F+++++ 
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                ++    +    M      P+V +YS+LI GLC++GRL  A  LF ++  R L P+
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD--ALRFFFQ 443
            +T+++LIDG  +S ++    + Y  M+  G+KPD V+ + L+NGL  +GD    R    
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 444 SVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
            ++M  + P+   + TL+DG C+       +++   M    +  D +  T LI G    G
Sbjct: 388 EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A     +M++ G+ PD  TY+ +I G  K  N+ +G  + K M+ NG  P +  YN
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYN 507

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           VL+N L K+  +  A  L   + + G+ PD ITYN ++ G+C
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHC 549



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 142/292 (48%), Gaps = 30/292 (10%)

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G +    VF ++M AY   G V  A+Q +  + N  F         L+  +      V  
Sbjct: 148 GTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTI 207

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
              + ++L     P +  Y+ LI+ FCK G +RD   +++ + KRGL+P  V        
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVS------- 260

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
                                  FNTL++G C+ +   +  +L   M    I PDV T++
Sbjct: 261 -----------------------FNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYS 297

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           VLI G+  +G L  A  LF +M +RGL P+ IT++A+I G ++ + +   ++ +  M   
Sbjct: 298 VLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTM 357

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           GV PD+ +YN LLN L K  +++ A KL  ++   G++PD ITY T+I GYC
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYC 409



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 175/410 (42%), Gaps = 71/410 (17%)

Query: 15  INKCYCSESKTHISDLQFNQA------------NAILANLIKTNNPTPAIQFFKWTHNCV 62
           INK +C E     + L FN+             N ++  L K+ N     +  K      
Sbjct: 230 INK-FCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288

Query: 63  SSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLI 119
             P++   + LIH L +    DVA  +FD+M  Q G   N            G  ++ LI
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ-QRGLRPN------------GITFTALI 335

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC 179
           +   R  ++D ++  +  M  MG+   PDLV                             
Sbjct: 336 DGQYRSRRMDSAMNTYHQMLTMGV--KPDLV----------------------------- 364

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y  L+NGL + G +  A  +  ++   G  P+ +T   ++   C  G + +A  +   +
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G   + V F+ LI+ FC++ ++  A +    M+E  + PD   Y+++IDG  K G +
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           K G +LL      G K  V+ ++ +M+     G +  A    + MLN G  P+ I+Y+IL
Sbjct: 485 KMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL 544

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLT----YSSLIDGFCKSGKLR 405
           ++G C+ G+  +       +L  R E  L+     Y+SL+  + KS K R
Sbjct: 545 LEGHCKNGKAED-------LLKLRNEKGLIVDYAYYTSLVSEYNKSLKDR 587



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 83/167 (49%)

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
           F+ + +     P +  +N L++  C+     D   +F  +    ++P  ++   LI G+ 
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
              +L     L   M +  + PDV TYS +IHGL K   + V   +F  M++ G+ P+  
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +  L++   +   +D+A+  + Q+   G++PD++ YNT++ G C +
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKV 376


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 212/430 (49%), Gaps = 9/430 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++  L R+  +  A      +++ G+ P+  T N ++   C   Q+  A  LFD +
Sbjct: 155 TYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 214

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            L G   +VV+++TLI   C+  ++++A +L+    EMD  PD+ +Y+ L+ GL  A R 
Sbjct: 215 PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFG---EMD-QPDMHMYAALVKGLCNAERG 270

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +EG  +L    + G +     +++V+D          A +    M   G  P V++ + +
Sbjct: 271 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV 330

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I   C++GR+ +A  +   + +R  +P++ TY++L+ GFC  GK+    +L + M   G+
Sbjct: 331 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGV 390

Query: 420 KPDAVVCSLLINGLMGDA-LRFFFQSVRMT----LIPNLFIFNTLMDGCCRLKRATDTVK 474
            PDAV  +LLI G   D  +   F+ +R+     LI + + +N L++  C+  R      
Sbjct: 391 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 450

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  +    IKP+ +T   LI G+   G    A     +M+  G TPD  TYS+ I  L 
Sbjct: 451 LFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 510

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K    GL     M +  V P    Y ++++ L+KE N     + +G++   G  PD++
Sbjct: 511 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVV 570

Query: 595 TYNTIICGYC 604
           TY T +  YC
Sbjct: 571 TYTTSMRAYC 580



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/555 (24%), Positives = 249/555 (44%), Gaps = 43/555 (7%)

Query: 76  QSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIF 135
           +++  DVA  +FDKM +         R F   +      Y+ LIE     G+IDE+VE+F
Sbjct: 200 RTNQVDVARDLFDKMPL---------RGFAQDV----VSYATLIEGLCEAGRIDEAVELF 246

Query: 136 AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRK 191
             M    +++   LV+ L  C  +    G    + R M+  G+      Y  +++   R+
Sbjct: 247 GEMDQPDMHMYAALVKGL--CNAERGEEGLL--MLRRMKELGWRPSTRAYAAVVDFRCRE 302

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
              + A  M +++ ++G  P +VTC  ++   C  G++ +A  + +++ L G KPNV T+
Sbjct: 303 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 362

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + L+  FC E K+ KA  L N M    + PD + Y++LI G    G ++    LL     
Sbjct: 363 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 422

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            GL  D   ++++++A    G   +A   +D +   G  PN ++++ LI GLC+ G+   
Sbjct: 423 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 482

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A     +++     P   TYSS I+  CK    ++G S    M+++ +KP  V  +++I+
Sbjct: 483 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 542

Query: 432 GLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
            L+     G   R + + V     P++  + T M   C   R  +   + M M    +  
Sbjct: 543 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 602

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH--------------- 531
           D + +  L+ G AS G    A+ +  QM      P+  TY  ++                
Sbjct: 603 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 662

Query: 532 --GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
             G++K   ++    +F +M++N   P+   Y+ +L    ++   + A  L   + +  +
Sbjct: 663 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 722

Query: 590 EPDIITYNTIICGYC 604
             +   Y  ++  +C
Sbjct: 723 SLNEDIYTALVTCFC 737



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 175/374 (46%), Gaps = 19/374 (5%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P P   T++ +I + C+ A L +A +  +LM+     PD   ++ LI G  +  ++    
Sbjct: 149 PAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVAR 208

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L      RG   DVV ++++++     G +  AV+ +  M      P++  Y+ L+KGL
Sbjct: 209 DLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGL 264

Query: 364 CQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           C   R     G  G +++RR++     PS   Y++++D  C+  K ++   +   M ++G
Sbjct: 265 CNAER-----GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKG 319

Query: 419 LKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           L P  V C+ +IN     G M DALR           PN++ +N L+ G C   +    +
Sbjct: 320 LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAM 379

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M    + PD +T+ +LIRG    G + SA  L   M   GL  D  TY+A+I+ L
Sbjct: 380 TLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINAL 439

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K         +F  +E  G+ P+   +N L+N L K    D A K   ++   G  PD 
Sbjct: 440 CKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDT 499

Query: 594 ITYNTIICGYCSLN 607
            TY++ I   C + 
Sbjct: 500 YTYSSFIEHLCKMK 513



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/521 (22%), Positives = 220/521 (42%), Gaps = 26/521 (4%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            +F   L       + +I  Y + G++ +++ +   M   G   +      L+    +  
Sbjct: 314 EMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEG 373

Query: 162 SVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            V +   L   MR  G       Y  L+ G    G IE+AF + R +   G + +  T N
Sbjct: 374 KVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYN 433

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++  LC +G+   A SLFD L   G KPN VTF++LIN  CK  K + A++    M+  
Sbjct: 434 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA 493

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              PD   YS  I+ L K    +EG   +   L + +K   V ++ V+   +   + G  
Sbjct: 494 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 553

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            +T+  M++ G  P+V++Y+  ++  C +GRL EA  +  ++    +    + Y++L+DG
Sbjct: 554 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 613

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRF----FFQSVRMT 448
               G+     S+   M      P+     +L+  L+      D L       ++++ +T
Sbjct: 614 HASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELT 673

Query: 449 -------------LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
                         +PN   ++++++G     R  +   L  LM   +I  +   +T L+
Sbjct: 674 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 733

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
                      A +L   M++ G  P +++Y  ++ GL           +F        +
Sbjct: 734 TCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 793

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
           PD  ++ V+++ LIK+ + D + ++   L      P   TY
Sbjct: 794 PDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 834



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%)

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGV-APDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           +++++  L +     + L +F  M R+   AP    YN ++  L +  +L  AL+    +
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 585 TDRGLEPDIITYNTIICGYCSLN 607
              G  PD  T+N++I GYC  N
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTN 202


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 218/408 (53%), Gaps = 6/408 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           + R++  +   P+  T N ++   C  GQI  A S+   +L  G +P+ VT +TLI   C
Sbjct: 85  LSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLC 144

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            + +++KA   ++ ++      D + Y  LI+G+ K G  +   +LL     R  + +VV
Sbjct: 145 LKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVV 204

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           ++++++D       V  A   +  M   G   NV++YS +I G C  G+L EA G   ++
Sbjct: 205 MYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEM 264

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR 439
           +++ + P +  Y++L+D   K GK+++  ++   ++K  LKP+ +  + LI+G      +
Sbjct: 265 VLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYA----K 320

Query: 440 FFFQSVR-MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F +V  M + P+++ +N +++  C++KR  + + L+  M   N+ P+ +T+  LI G+
Sbjct: 321 HVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGL 380

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G +S A  L  +M  RG   +VITY+++I+GL K   +   + +   M+  G+ PD+
Sbjct: 381 CKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDM 440

Query: 559 AIYNVLLN-MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
              N+LL+ +L K   L  A  LF  L D+G  P++ TYN II G+C 
Sbjct: 441 YTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCK 488



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 220/431 (51%), Gaps = 14/431 (3%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           F     L+N     G I  AF +  ++++ G+ P+ VT   ++K LC+ GQ+  A    D
Sbjct: 98  FFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHD 157

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            LL  G + + V++ TLIN  CK  +   A QL   +      P++++Y+ +ID L K  
Sbjct: 158 KLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRK 217

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            + E   L      +G+  +VV +S+++  +  +G +  A+   + M+     P+V  Y+
Sbjct: 218 LVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYN 277

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            L+  L ++G++ EA  +   ++   L+P+++TY++LIDG+ K         +++ +   
Sbjct: 278 TLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--------HVFNAVGLM 329

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G+ PD    +++IN L     + +AL  + +  +  ++PN   +N+L+DG C+  R +  
Sbjct: 330 GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYA 389

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             L   M       +VIT+  LI G+   G L  AI L  +M  +G+ PD+ T + ++HG
Sbjct: 390 WDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHG 449

Query: 533 LF-KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           L  KGK +     +F+ +   G  P++  YN+++    KE  LD A  L  ++ D G  P
Sbjct: 450 LLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSP 509

Query: 592 DIITYNTIICG 602
           + IT+  IIC 
Sbjct: 510 NAITFKIIICA 520



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 231/481 (48%), Gaps = 47/481 (9%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           + LI  +  +G+I+ +  + + +   G    PD V    L+  L     V +       +
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILKWG--YQPDTVTLTTLIKGLCLKGQVKKALHFHDKL 159

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +GF      Y  L+NG+ + G    A  + R++  R   PN+V  N I+  LC    +
Sbjct: 160 LAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLV 219

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A +LF  + + G   NVVT+S +I+ FC   KL +A    N M+   + PD+ IY+ L
Sbjct: 220 SEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTL 279

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           +D L K G++KE   +L   +   LK +V+ +++++D Y        A   ++ +   G 
Sbjct: 280 VDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGV 331

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V SY+I+I  LC+  R+ EA  L+ ++  + + P+ +TY+SLIDG CKSG++   + 
Sbjct: 332 TPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWD 391

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           L D M  RG                                 N+  +N+L++G C+  + 
Sbjct: 392 LIDEMHDRGHH------------------------------ANVITYNSLINGLCKNGQL 421

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS-LSSAILLFFQMLKRGLTPDVITYSA 528
              + L   M    I+PD+ T  +L+ G+  +G  L +A  LF  +L +G  P+V TY+ 
Sbjct: 422 DKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNI 481

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           II+G  K   +     +   ME +G +P+   + +++  L+++   D A KL  ++  RG
Sbjct: 482 IIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARG 541

Query: 589 L 589
           L
Sbjct: 542 L 542



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 143/295 (48%), Gaps = 15/295 (5%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           ++ F+ ++D++  +      V    R+      P+  + +ILI   C  G++  A  +  
Sbjct: 63  IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLS 122

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MG 435
           ++L    +P  +T ++LI G C  G+++     +D ++ +G + D V    LING+  +G
Sbjct: 123 KILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIG 182

Query: 436 DALRFFFQSVRMT----LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           +  R   Q +R        PN+ ++NT++D  C+ K  ++   LF  M +  I  +V+T+
Sbjct: 183 ET-RAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTY 241

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           + +I G    G L+ A+    +M+ + + PDV  Y+ ++  L K   +    ++  ++ +
Sbjct: 242 SAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVK 301

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             + P++  YN L++   K         +F  +   G+ PD+ +YN +I   C +
Sbjct: 302 TCLKPNVITYNTLIDGYAKH--------VFNAVGLMGVTPDVWSYNIMINRLCKI 348



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 163/345 (47%), Gaps = 48/345 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS--CLVD--SNSVGQYYKLC 170
           Y+ +I+   +   + E+  +F+ MS  GI  +      ++   C+V   + ++G   ++ 
Sbjct: 206 YNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMV 265

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                    +Y  L++ L ++G ++ A ++   +++    PN++T N ++         G
Sbjct: 266 LKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLID--------G 317

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F+ + L+G  P+V +++ +IN  CK  ++E+A  LY  M + ++VP+ + Y+ LI
Sbjct: 318 YAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLI 377

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM------ 344
           DGL K+GR+    +L+    DRG   +V+ ++S+++     G + +A+   ++M      
Sbjct: 378 DGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQ 437

Query: 345 ------------------------------LNGGFLPNVISYSILIKGLCQQGRLVEACG 374
                                         L+ G+ PNV +Y+I+I G C++G L EA  
Sbjct: 438 PDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYA 497

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           L  ++      P+ +T+  +I    + G+      L   MI RGL
Sbjct: 498 LQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 117/272 (43%), Gaps = 40/272 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++   + GK+ E+  + A +  +   L P+++    + L+D  +   +  +     
Sbjct: 276 YNTLVDALHKEGKVKEAKNVLAVI--VKTCLKPNVIT--YNTLIDGYAKHVFNAVGLMGV 331

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++N L +   +E A ++++++ Q+  VPN VT N ++  LC +G+I  A  
Sbjct: 332 TPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWD 391

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII--------- 285
           L D +   G   NV+T+++LIN  CK  +L+KA  L N M +  + PD+           
Sbjct: 392 LIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLL 451

Query: 286 ---------------------------YSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
                                      Y+I+I G  K G L E   L     D G   + 
Sbjct: 452 CKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNA 511

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + F  ++ A +  G+  +A +    M+  G L
Sbjct: 512 ITFKIIICALLEKGETDKAEKLLCEMIARGLL 543


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 248/499 (49%), Gaps = 11/499 (2%)

Query: 116 SFLIENYVRI-GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +F++E ++R+  K+++   +F +M    I    D    +   L     + Q   +   MR
Sbjct: 126 NFMLE-FLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMR 184

Query: 175 GKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF +  +  NGL+    + G    A  ++R+++  G  P++ T + ++  L       
Sbjct: 185 KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSE 244

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               L   +  +G +PNV TF+  I    +  K+++A++++  M +    PDL+ Y++LI
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L  AG+L+   EL +     G K D V++ +++D +   GD+    + + +M   G++
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V++++IL+  LC+     EA   F  +  + + P+L TY++LI G  ++G++ D   L
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKL 424

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            D M   G++P A      I+     G  G A+  F +     ++PN+   N  +     
Sbjct: 425 LDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           + R  +   +F  +    + PD +T+ ++++  +  G +  A+ L  +M++ G  PDVI 
Sbjct: 485 MGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIV 544

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            +++I  L+K   +     MF  M+   ++P +  YN LL+ L KE  +  A++LF  + 
Sbjct: 545 VNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604

Query: 586 DRGLEPDIITYNTIICGYC 604
            +   P+ I++NT++  +C
Sbjct: 605 XKKCSPNTISFNTLLDCFC 623



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 249/528 (47%), Gaps = 59/528 (11%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQ----FGKTYNFFRLF----RDS---------LGDFG 112
           LIH+L+QS     A  V+ +MV +      KTY+   +     RDS         + D G
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257

Query: 113 CD---YSFLIENYV--RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
                Y+F I   V  R GKIDE+ EIF  M D G    PDLV                 
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGC--GPDLV----------------- 298

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                        Y  L++ L   G +ENA  +  ++   G  P+ V    +L +    G
Sbjct: 299 ------------TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            +      +  +   G  P+VVTF+ L++  CK    ++AF  +++M +  ++P+L  Y+
Sbjct: 347 DLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYN 406

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL +AGR+++  +LL T    G++     + + +D +   G+ G+AV+T+++M   
Sbjct: 407 TLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAK 466

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +PN+++ +  +  L + GRL EA  +F  +    L P  +TY+ ++  + K G++ + 
Sbjct: 467 GIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEA 526

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            +L   MI+ G +PD +V + LI+     G + +A + F +   M L P +  +NTL+ G
Sbjct: 527 VNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSG 586

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +  R    ++LF  M      P+ I+   L+        +  A+ +F +M      PD
Sbjct: 587 LGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPD 646

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           V+TY+ +I+GL K   ++     F  ++++ + PD      LL  L+K
Sbjct: 647 VLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVK 693



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 249/541 (46%), Gaps = 49/541 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y  L++ +   G +D   E ++ M   G Y+ PD+V    L+  L  +    + +     
Sbjct: 335 YITLLDKFNDFGDLDTFKEFWSQMEADG-YM-PDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR +G       Y  L+ GLLR G IE+A  +   +   G  P   T    +     +G+
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            G A   F+ +   G  PN+V  +  + +  +  +L +A  ++N + E  L PD + Y++
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++    K G++ E   LL   +  G + DV+V +S++D+    G V  A Q +DRM +  
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P V++Y+ L+ GL ++GR+ +A  LF  ++ ++  P+ +++++L+D FCK+ ++    
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELAL 632

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD----ALRFFFQSVRMTLIPNLFIFNTLMDG-- 462
            ++  M     KPD +  + +I GL+ +       +FF  ++ ++ P+     TL+ G  
Sbjct: 633 KMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLV 692

Query: 463 -CCRLKRATDTVKLFM--------------LMGMYNIKPD-----VITHTVLIRGIASQG 502
            C ++  A    + FM              LMG   ++ +     +    +++ GI  + 
Sbjct: 693 KCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICRED 752

Query: 503 SL----------SSAILLFFQML-----KRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           S               L  +Q+      K G++P + +Y+ +I  L +         +FK
Sbjct: 753 SFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFK 812

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            M+  G APD   +N+LL +  K   +    +L+ ++  R  +PD ITYN +I      N
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872

Query: 608 S 608
           +
Sbjct: 873 N 873



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 227/498 (45%), Gaps = 22/498 (4%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG--- 177
             +G++ E+  +F  + + G  L+PD V    +M C      V +   L   M   G   
Sbjct: 483 AEMGRLREAKTMFNGLRENG--LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 178 -FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
              V   L++ L + G ++ A+ M  ++      P +VT N +L  L   G++  A  LF
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + ++     PN ++F+TL++ FCK  ++E A ++++ M  MD  PD++ Y+ +I GL K 
Sbjct: 601 ESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLNGGFLPNVIS 355
            ++          L + +  D V   +++   V  G +G A+    D M    F  N   
Sbjct: 661 NKVNHAF-WFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSF 719

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRR---LEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +  L+ G   +  + +A  +F + L+      E S L    L+   CK  +    + ++D
Sbjct: 720 WEDLMGGTLVEAEMDKAI-IFAEELVLNGICREDSFLI--PLVRVLCKHKRELYAYQIFD 776

Query: 413 NMIKR-GLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
              K+ G+ P     + LI  L+       A   F     +   P+ F FN L+    + 
Sbjct: 777 KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKS 836

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            + T+  +L+  M     KPD IT+ ++I  +A   +L  A+  F+ ++     P   TY
Sbjct: 837 GKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTY 896

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
             +I GL K   +   + +F+ M   G  P+ AI+N+L+N   K  + + A +LF ++ +
Sbjct: 897 GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN 956

Query: 587 RGLEPDIITYNTIICGYC 604
            G+ PD+ +Y  ++   C
Sbjct: 957 EGIRPDLKSYTILVDCLC 974



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 130/551 (23%), Positives = 251/551 (45%), Gaps = 31/551 (5%)

Query: 67   IAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRD-SLGDFGCDYSFLIENYVRI 125
            +  LI  L ++   D A  +FD+M              +D  L      Y+ L+    + 
Sbjct: 545  VNSLIDSLYKAGRVDEAWQMFDRM--------------KDMKLSPTVVTYNTLLSGLGKE 590

Query: 126  GKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMR----GKGFC 179
            G++ +++E+F  M  +    SP+ +    L+ C   ++ V    K+   M          
Sbjct: 591  GRVQKAIELFESM--IXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVL 648

Query: 180  VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF-DV 238
             Y  ++ GL+++  + +AF    Q +++   P+ VT   +L  L   GQIG+A S+  D 
Sbjct: 649  TYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDF 707

Query: 239  LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
            +  V  + N   +  L+     EA+++KA      ++   +  +      L+  L K  R
Sbjct: 708  MYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKR 767

Query: 299  LKEGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
                 ++      + G+   +  ++ ++   + +    +A   +  M N G  P+  +++
Sbjct: 768  ELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFN 827

Query: 358  ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +L+    + G++ E   L+ +++ RR +P  +TY+ +I    KS  L      + +++  
Sbjct: 828  MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 418  GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
              +P       LI+GL     + +A+R F +       PN  IFN L++G  ++      
Sbjct: 888  DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947

Query: 473  VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             +LF  M    I+PD+ ++T+L+  +   G +  A+  F ++   GL PD I Y+ II+G
Sbjct: 948  CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007

Query: 533  LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
            L K + +   L ++  M   G+ PD+  YN L+  L     ++ A +++ +L   GLEPD
Sbjct: 1008 LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067

Query: 593  IITYNTIICGY 603
            + TYN +I GY
Sbjct: 1068 VFTYNALIRGY 1078



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 241/549 (43%), Gaps = 36/549 (6%)

Query: 36   NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
            N +L+ L K      AI+ F+       SPN      L+    ++D  ++A  +F KM +
Sbjct: 581  NTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTV 640

Query: 93   QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESV--EIFAYMSDMGIYLSPDLV 150
                                C    L  N V  G I E+     F +   +   + PD V
Sbjct: 641  ------------------MDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHV 682

Query: 151  Q--RLMSCLVDSNSVGQYYKLCRA-MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQ 203
                L+  LV    +G    + R  M    F V    +E LM G L +  ++ A     +
Sbjct: 683  TICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEE 742

Query: 204  VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL-VGPKPNVVTFSTLINAFCKEA 262
            ++  G          +++ LC + +   A  +FD     +G  P + +++ LI    +  
Sbjct: 743  LVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVH 802

Query: 263  KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
              EKA+ L+  M  +   PD   +++L+    K+G++ E  EL    + R  K D + ++
Sbjct: 803  YTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYN 862

Query: 323  SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
             V+ +     ++ +A+  +  +++  F P   +Y  LI GL + GRL EA  LF ++   
Sbjct: 863  IVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY 922

Query: 383  RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDA 437
              +P+   ++ LI+G+ K G       L+  M+  G++PD    ++L++     G + +A
Sbjct: 923  GCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982

Query: 438  LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            L +F +     L P+   +N +++G  + +R  + + L+  M    I PD+ T+  L+  
Sbjct: 983  LYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLN 1042

Query: 498  IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
            +   G +  A  ++ ++   GL PDV TY+A+I G    +N      ++K M  +G  P+
Sbjct: 1043 LGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPN 1102

Query: 558  IAIYNVLLN 566
            I  Y  L N
Sbjct: 1103 IGTYAQLPN 1111


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 246/512 (48%), Gaps = 13/512 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F R+ +D        YS LI      G+++E++++   M D GI  +       +  L D
Sbjct: 260 FDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCD 319

Query: 160 SNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
           +    +  KL   M+ +G       Y  L++GL R G  E A  ++ +++  G VP  VT
Sbjct: 320 AGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVT 379

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            + ++ +L + G+   A ++F+ +L     PN  T++ +I  FC    ++KA  +++ M+
Sbjct: 380 YSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML 439

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           +    P++I Y+I+I   FK G +     LL      GLKLD   +++++  +   G + 
Sbjct: 440 KAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLE 499

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A   ++ M+  G  PNV++Y+ +I G     ++ +A  LF +++     PS  TY+ +I
Sbjct: 500 HAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMI 559

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLI 450
            GF K+ ++ +  +    M+K+GL P+ +  +  I+GL  +     A + F +  +    
Sbjct: 560 SGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYF 619

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PNL  +++L+DG C+  +A D  +L         +P+V T+T L+RG+  +G    A  L
Sbjct: 620 PNLCTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQL 675

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
              M K+GL P    Y A++ G  K   +   L +F  M   G  P ++ Y  L+  L K
Sbjct: 676 VESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCK 735

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
                 A  +F  +  +    D + +  ++ G
Sbjct: 736 ANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDG 767



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 237/529 (44%), Gaps = 67/529 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + + G +D + E+F  M   G                D NSV           
Sbjct: 240 YTSLIIGHCKNGNLDLAFEMFDRMVKDG---------------CDPNSV----------- 273

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+NGL  +G +E A  M  ++I +G  P +      +  LC  G+   A  
Sbjct: 274 -----TYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVK 328

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   +   G  PNV T++ LI+   ++ K E A  +Y+ M+   LVP  + YS LI+ L+
Sbjct: 329 LLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLY 388

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             GR +    +    L      +   ++ ++  +  IG + +A   +D+ML  G  PNVI
Sbjct: 389 VEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVI 448

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+I+I    +QG +  A  L   +    L+    TY++LI GF + GKL   FSL++ M
Sbjct: 449 TYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEM 508

Query: 415 IKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           ++ G+ P+ V  + +ING +      DAL  F++ V    +P+   +N ++ G  +  R 
Sbjct: 509 VEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRI 568

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           ++       M    + P+VIT+T  I G+   G  S A  +F +M KR   P++ TYS++
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSL 628

Query: 530 IHGLFK---------------GKNISV------GL----------HMFKLMERNGVAPDI 558
           I GL +                 N+        GL           + + M++ G+ P  
Sbjct: 629 IDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSE 688

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            IY  LL    K   +++ALK+F  +   G +P +  Y  +IC  C  N
Sbjct: 689 EIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKAN 737



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 218/428 (50%), Gaps = 13/428 (3%)

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           +F M+GL R   IE        ++  G  PN+ T N ++K LC  G++  A  +   +  
Sbjct: 179 KFDMDGLGRDVYIE--------MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFH 230

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G  P+  T+++LI   CK   L+ AF++++ M++    P+ + YS LI+GL   GRL+E
Sbjct: 231 YGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEE 290

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             ++L   +D+G++  V  ++  + +    G    AV+   +M   G  PNV +Y+ LI 
Sbjct: 291 AMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALIS 350

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GL + G+   A G++ ++L   L P+ +TYS+LI+     G+     ++++ M+     P
Sbjct: 351 GLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLP 410

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           +    +++I G      +  A   F Q ++    PN+  +N ++    +     + ++L 
Sbjct: 411 NTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLL 470

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
            +M    +K D  T+  LI G +  G L  A  LF +M++ G++P+V+TY+AII+G    
Sbjct: 471 EMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTV 530

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +   L +F  M  +G  P    YN++++   K   +  A    G++  +GL P++ITY
Sbjct: 531 AKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITY 590

Query: 597 NTIICGYC 604
            + I G C
Sbjct: 591 TSFIDGLC 598



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 219/471 (46%), Gaps = 48/471 (10%)

Query: 183 FLMNGLLR----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           F  N +++    KG ++ A  +   +   G  P+  T   ++   C NG +  A  +FD 
Sbjct: 203 FTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDR 262

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           ++  G  PN VT+S LIN  C E +LE+A  +   M++  + P +  Y+I I  L  AGR
Sbjct: 263 MVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGR 322

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
             E  +LL     RG   +V  +++++      G    A+  Y +ML  G +P  ++YS 
Sbjct: 323 SCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSA 382

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI  L  +GR   A  +F  +L     P+  TY+ +I GFC  G ++   +++D M+K G
Sbjct: 383 LINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAG 442

Query: 419 LKPDAVVCSLLIN-----GLMGDALR---------------------------------- 439
             P+ +  +++I+     G M +A+R                                  
Sbjct: 443 PSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAF 502

Query: 440 -FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F + V   + PN+  +N +++G   + +  D + LF  M      P   T+ ++I G 
Sbjct: 503 SLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGF 562

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
           +    +S A     +M+K+GL P+VITY++ I GL K    S+   +F  M++    P++
Sbjct: 563 SKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNL 622

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             Y+ L++ L +E   + A +L     D G EP++ TY T++ G C    C
Sbjct: 623 CTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGRC 669



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 121/289 (41%), Gaps = 49/289 (16%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           GK  + F LF + + + G       Y+ +I  Y+ + K+D+++ +F  M + G   S   
Sbjct: 496 GKLEHAFSLFNEMV-EHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGT 554

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVI 205
              ++S    +N + +    C  M  +G       Y   ++GL + G    AF +  ++ 
Sbjct: 555 YNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMK 614

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC------ 259
           +R + PN+ T + ++  LC  GQ  +A  L D     G +PNV T++TL+   C      
Sbjct: 615 KRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCY 670

Query: 260 -----------------------------KEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
                                        K  ++E A ++++ M+     P L  Y  LI
Sbjct: 671 EADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALI 730

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
             L KA   ++   +  T L +    D VV++ ++D  +  G+   +++
Sbjct: 731 CALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLE 779


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 226/429 (52%), Gaps = 5/429 (1%)

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           E L    LR   + +A  +   +++    P+IV  N++L  +    +     SL   + +
Sbjct: 54  ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G + ++ TF+ +IN FC   ++  A  +   M+++   PD +    L++G  +  R+ +
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              L+   ++ G K D+V +++++D+      V  A   +  +   G  PNV++Y+ L+ 
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GLC   R  +A  L   ++ +++ P+++TYS+L+D F K+GK+ +   L++ M++  + P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D V  S LINGL     + +A + F   V    + ++  +NTL++G C+ KR  D +KLF
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    +  + +T+  LI+G    G +  A   F QM   G++PD+ TY+ ++ GL   
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +   L +F+ M++  +  DI  Y  ++  + K   ++ A  LF  L+ +GL+PDI+TY
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473

Query: 597 NTIICGYCS 605
            T++ G C+
Sbjct: 474 TTMMSGLCT 482



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 198/387 (51%), Gaps = 5/387 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   ++ T N ++   C   Q+  A S+   +L +G +P+ VT  +L+N FC+  ++  A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L + M+E+   PD++ Y+ +ID L K  R+ +  +       +G++ +VV ++++++ 
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                    A +    M+     PNVI+YS L+    + G+++EA  LF +++   ++P 
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++TYSSLI+G C   ++ +   ++D M+ +G   D V  + LING      + D ++ F 
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +  +  L+ N   +NTL+ G  +        + F  M  + I PD+ T+ +L+ G+   G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A+++F  M KR +  D++TY+ +I G+ K   +     +F  +   G+ PDI  Y 
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGL 589
            +++ L  +  L     L+ ++   GL
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 196/380 (51%), Gaps = 13/380 (3%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NG  R+  + +A  +  ++++ G+ P+IV  N I+  LC   ++ +A   F  +   G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNVVT++ L+N  C  ++   A +L + M++  + P++I YS L+D   K G++ E  
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL    +   +  D+V +SS+++       +  A Q +D M++ G L +V+SY+ LI G 
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+  R+ +   LF ++  R L  + +TY++LI GF ++G +      +  M   G+ PD 
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400

Query: 424 VVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              ++L+     NG +  AL  F    +  +  ++  + T++ G C+  +  +   LF  
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           + +  +KPD++T+T ++ G+ ++G L     L+ +M + GL  +  T S          +
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGD 512

Query: 539 ISVGLHMFKLMERNGVAPDI 558
           I++   + K M   G AP +
Sbjct: 513 ITLSAELIKKMLSCGYAPSL 532



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 181/322 (56%), Gaps = 8/322 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG 175
           L+  + R  ++ ++V +   M ++G    PD+V    ++  L  +  V   +   + +  
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIG--YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           KG       Y  L+NGL       +A  +   +I++   PN++T + +L     NG++  
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  LF+ ++ +   P++VT+S+LIN  C   ++++A Q+++LM+    + D++ Y+ LI+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G  KA R+++G +L      RGL  + V +++++  +   GDV +A + + +M   G  P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           ++ +Y+IL+ GLC  G L +A  +F  +  R ++  ++TY+++I G CK+GK+ + +SL+
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 412 DNMIKRGLKPDAVVCSLLINGL 433
            ++  +GLKPD V  + +++GL
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGL 480



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 166/309 (53%), Gaps = 4/309 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I++  +  +++++ + F  +   GI  +      L++ L +S+      +L   M 
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K        Y  L++  ++ G +  A  +  ++++    P+IVT + ++  LC++ +I 
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ +FD+++  G   +VV+++TLIN FCK  ++E   +L+  M +  LV + + Y+ LI
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G F+AG + +  E        G+  D+  ++ ++      G++ +A+  ++ M      
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            ++++Y+ +I+G+C+ G++ EA  LF  + ++ L+P ++TY++++ G C  G L +  +L
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492

Query: 411 YDNMIKRGL 419
           Y  M + GL
Sbjct: 493 YTKMKQEGL 501



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 167/376 (44%), Gaps = 34/376 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           NAI+ +L KT     A  FFK        PN+     L++ L  S     A+ +   M I
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-I 252

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +   T N               YS L++ +V+ GK+ E+ E+F  M  M I   PD+V  
Sbjct: 253 KKKITPNVIT------------YSALLDAFVKNGKVLEAKELFEEMVRMSI--DPDIVTY 298

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L++ L   + + +  ++   M  KG       Y  L+NG  +   +E+   + R++ Q
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           RG V N VT N +++     G +  A   F  +   G  P++ T++ L+   C   +LEK
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  ++  M + ++  D++ Y+ +I G+ K G+++E   L  +   +GLK D+V ++++M 
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G +      Y +M   G + N  + S         G +  +  L  ++L     P
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAP 530

Query: 387 SLLTYSSLIDGFCKSG 402
           SLL    +  G CK  
Sbjct: 531 SLL--KDIKSGVCKKA 544



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 55/104 (52%)

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L+ AI LF  M+K    P ++ ++ ++  + K K   V + + K ME  G+  D+  +N+
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           ++N       +  AL + G++   G EPD +T  +++ G+C  N
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 224/433 (51%), Gaps = 12/433 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV---TCNKILKRLCINGQIGNASSLF 236
            +   + GL + G IE AF   R + +           TC+ +++ LC  G++ +A SL 
Sbjct: 13  AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM--DLVPDLIIYSILIDGLF 294
           + ++  G  P++ T S LIN  CK  K+++A +    M             Y+ L++ L 
Sbjct: 73  ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLC 132

Query: 295 KAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
           KA ++ +   +  T + +R +  DVV +S ++D +  I ++GRA + Y +M++   +PNV
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 192

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            +Y+  + GL ++GR+ +A G++ +++     P ++TYS+LI GF  + K      L++ 
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEA 252

Query: 414 MIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           MI RG +P+AV  + L++GL       +A   F + V     P+   + TL+ G C + +
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               V++F  M      PDV+ +  L++G    G    A  LF  M+ R   PD ++++ 
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372

Query: 529 IIHGLFKGKNISVGLHMFKLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           +I GL K K +   + +F+ ME++ G +PD+  YN L+  L  E  L  A+K+F ++   
Sbjct: 373 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 432

Query: 588 GLEPDIITYNTII 600
            L PD   +N ++
Sbjct: 433 KLSPDPHAFNVLL 445



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 221/430 (51%), Gaps = 20/430 (4%)

Query: 157 LVDSNSVGQYYKLCRAMRGK---------GFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           L  S  + Q ++ CR M+           G C    ++  L + G +++A  +   +I+R
Sbjct: 21  LCKSGKIEQAFEACRTMQESLSSSQPPSSGTC--HSVIQELCKAGRVDSALSLLETMIKR 78

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVL--LLVGPKPNVVTFSTLINAFCKEAKLE 265
           G+ P++ T + ++  LC   +I  A      +   +     +  ++++L+N+ CK  K+ 
Sbjct: 79  GYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVH 138

Query: 266 KAFQLYNLMM-EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           +AF +++ M+ E  +VPD++ YSILIDG  K   L    +L    +D     +V  +++ 
Sbjct: 139 QAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAF 198

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           ++  +  G +  A   Y+ M++ G  P+VI+YS LI G     +  +A  LF  ++ R  
Sbjct: 199 LNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGC 258

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
            P+ +TY+ L+ G CK  K  +   L+  M++RG  PD V  + L+ G      +  A+ 
Sbjct: 259 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVE 318

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F + V     P++  +N L+ G  R  +  +  +LF +M     KPD ++H ++I G++
Sbjct: 319 VFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLS 378

Query: 500 SQGSLSSAILLFFQMLK-RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
               L  A+ +F +M +  G +PD++TY+++I GL   + +S  + +FK ++R  ++PD 
Sbjct: 379 KAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDP 438

Query: 559 AIYNVLLNML 568
             +NVLL  +
Sbjct: 439 HAFNVLLEAM 448



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 203/393 (51%), Gaps = 17/393 (4%)

Query: 157 LVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFH----MHRQVIQRG 208
           L  +  V     L   M  +G+C     +  L+N L +   I+ A      M+R +  R 
Sbjct: 59  LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRA 118

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK-PNVVTFSTLINAFCKEAKLEKA 267
              +  + N +L  LC   ++  A ++F  ++      P+VV++S LI+ FCK  +L +A
Sbjct: 119 --SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRA 176

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +LY  M++++ VP++  Y+  ++GL + GR+ +   +    +  G   DV+ +S+++  
Sbjct: 177 EKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHG 236

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +       +A + ++ M++ G  PN ++Y+ L+ GLC++ +  EA  LF +++ R  +P 
Sbjct: 237 FSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPD 296

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFF 442
            +TY++L+ GFC  GK+     ++D M+ +G  PD V  + L+ G       G+A + F 
Sbjct: 297 KVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQ 356

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM-YNIKPDVITHTVLIRGIASQ 501
             V     P+    N ++DG  + KR  D V++F  M   +   PD++T+  LI G+  +
Sbjct: 357 VMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGE 416

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
             LS A+ +F ++ +  L+PD   ++ ++  ++
Sbjct: 417 QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMY 449



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 186/361 (51%), Gaps = 13/361 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           +S LI    +  KI E+ E    M+      +        L++ L  +  V Q + +   
Sbjct: 87  HSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFST 146

Query: 173 MRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           M  +   V     Y  L++G  +   +  A  +++Q+I    VPN+ T N  L  L   G
Sbjct: 147 MVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKG 206

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +I +A  +++ ++  G  P+V+T+STLI+ F    K ++A +L+  M+     P+ + Y+
Sbjct: 207 RIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYN 266

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+ GL K  +  E +EL    ++RG   D V +++++  +  +G + +AV+ +D M++ 
Sbjct: 267 CLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 326

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V++Y+ L+KG  + G+  EA  LF  ++ R  +P  ++++ +IDG  K+ +L D 
Sbjct: 327 GHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDA 386

Query: 408 FSLYDNMIK-RGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMD 461
             +++ M +  G  PD V  + LI GL G     +A++ F +  R+ L P+   FN L++
Sbjct: 387 VEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLE 446

Query: 462 G 462
            
Sbjct: 447 A 447



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 169/346 (48%), Gaps = 24/346 (6%)

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV---VFSSVMDAYVGIGDVGRAVQT 340
           + ++  + GL K+G++++  E   T  +              SV+      G V  A+  
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE---PSLLTYSSLIDG 397
            + M+  G+ P++ ++S+LI  LC+  ++ EA   F Q + R +     S  +Y+SL++ 
Sbjct: 72  LETMIKRGYCPDMATHSMLINELCKADKIQEA-QEFLQGMNRTISTRASSCFSYNSLLNS 130

Query: 398 FCKSGKLRDGFSLYDNMI-KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
            CK+ K+   F+++  M+ +R + PD V  S+LI+G      +G A + + Q + +  +P
Sbjct: 131 LCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 190

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+  +N  ++G  R  R  D   ++  M      PDVIT++ LI G +       A  LF
Sbjct: 191 NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             M+ RG  P+ +TY+ ++HGL K         +F+ M   G  PD   Y  LL      
Sbjct: 251 EAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNV 310

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
             ++ A+++F ++  +G +PD++ YN           CL+ G+F++
Sbjct: 311 GKIEQAVEVFDEMVSKGHDPDVVAYN-----------CLLKGFFRA 345



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 197/400 (49%), Gaps = 17/400 (4%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAM-- 173
           +I+   + G++D ++ +   M   G    PD+     L++ L  ++ + +  +  + M  
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRG--YCPDMATHSMLINELCKADKIQEAQEFLQGMNR 112

Query: 174 ----RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVI-QRGFVPNIVTCNKILKRLCINGQ 228
               R      Y  L+N L +   +  AF +   ++ +R  VP++V+ + ++   C   +
Sbjct: 113 TISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDE 172

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +G A  L+  ++ +   PNV T++  +N   ++ ++  A  +Y  M+     PD+I YS 
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G   A +  + +EL    + RG + + V ++ ++           A + + +M+  G
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ ++Y+ L+ G C  G++ +A  +F +++ +  +P ++ Y+ L+ GF ++GK  +  
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAR 352

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR-MTLIPNLFIFNTLMDG 462
            L+  M+ R  KPD V  +++I+GL     + DA+  F +  +     P+L  +N+L+ G
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 412

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
            C  +R ++ +K+F  +    + PD     VL+  + + G
Sbjct: 413 LCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 170/368 (46%), Gaps = 13/368 (3%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI---LIDGLFKAGRLKEGN 303
           N V ++  +   CK  K+E+AF+    M E               +I  L KAGR+    
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA---VQTYDRMLNGGFLPNVISYSILI 360
            LL T + RG   D+   S +++       +  A   +Q  +R ++     +  SY+ L+
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTR-ASSCFSYNSLL 128

Query: 361 KGLCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
             LC+  ++ +A  +F  ++  R + P +++YS LIDGFCK  +L     LY  MI    
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 420 KPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+    +  +NGLM      DA   + + +     P++  ++TL+ G    ++     +
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  M     +P+ +T+  L+ G+  +     A  LF +M++RG  PD +TY+ +++G  
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               I   + +F  M   G  PD+  YN LL    +      A +LF  +  R  +PD +
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTV 368

Query: 595 TYNTIICG 602
           ++N +I G
Sbjct: 369 SHNIMIDG 376



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 147/293 (50%), Gaps = 5/293 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLC 170
           YS LI+ + +I ++  + +++  M D+    +       ++ L+     +++ G Y ++ 
Sbjct: 160 YSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMI 219

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            A        Y  L++G       + A  +   +I RG  PN VT N +L  LC   +  
Sbjct: 220 SAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPD 279

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF  ++  G  P+ VT++TL+  FC   K+E+A ++++ M+     PD++ Y+ L+
Sbjct: 280 EAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 339

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM-LNGGF 349
            G F+AG+  E  +L    + R  K D V  + ++D       +  AV+ ++RM  + G 
Sbjct: 340 KGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 399

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            P++++Y+ LI GLC + RL EA  +F ++   +L P    ++ L++    +G
Sbjct: 400 SPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 124/290 (42%), Gaps = 59/290 (20%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           NA L  L++      A   ++   +   SP++   + LIH    +   D A  +F+ M+ 
Sbjct: 196 NAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMIS 255

Query: 93  QFGK----TYN--------------FFRLFRDSLGDFGCD-----YSFLIENYVRIGKID 129
           +  +    TYN                 LFR  + + GCD     Y+ L+  +  +GKI+
Sbjct: 256 RGCRPNAVTYNCLLHGLCKESKPDEAHELFR-KMVERGCDPDKVTYTTLLYGFCNVGKIE 314

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
           ++VE+F  M   G    PD+V                              Y  L+ G  
Sbjct: 315 QAVEVFDEMVSKG--HDPDVV-----------------------------AYNCLLKGFF 343

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL-VGPKPNV 248
           R G    A  + + ++ R   P+ V+ N ++  L    ++ +A  +F+ +    G  P++
Sbjct: 344 RAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDL 403

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           VT+++LI   C E +L +A +++  +  + L PD   +++L++ ++ AG 
Sbjct: 404 VTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 237/501 (47%), Gaps = 31/501 (6%)

Query: 134 IFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG----KGFCVYEFLMNGLL 189
           I + M   G Y S  +   L+     S+     YKL + M       G+ VY  L+  + 
Sbjct: 365 ILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC 424

Query: 190 RKG------VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
             G        E A   + +++  G V N V      + LC  G+   A  +   ++  G
Sbjct: 425 SGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG 484

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+  T+S +I   C  +++E AF L+  M    +VPD+  Y+ILID   KAG +K+ +
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH 544

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
             L   +  G +  VV +++++ AY+    V  A + ++ M+  G  PNVI+Y+ LI G 
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604

Query: 364 CQQGRLVEACGLF----GQVLIRRLE------------PSLLTYSSLIDGFCKSGKLRDG 407
           C+ G + +AC ++    G   I  ++            P+++TY +L+DG CK+ K++D 
Sbjct: 605 CKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDA 664

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L + M   G +P+ +V   LI+G      + +A   F + V     PN++ +++L+D 
Sbjct: 665 RDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDR 724

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             + KR    +K+   M   +  P+++ +T +I G++       A  L   M ++G  P+
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V+TY+A+I G  K   +   L +F+ M   G AP+   Y VL+N      +LD A  L  
Sbjct: 785 VVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLE 844

Query: 583 QLTDRGLEPDIITYNTIICGY 603
           ++        + +Y  +I GY
Sbjct: 845 EMKQTYWPKHVSSYCKVIEGY 865



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/502 (24%), Positives = 228/502 (45%), Gaps = 91/502 (18%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G  E A+ +  +++  GFVP+  T ++++  LC   ++ NA  LF  +   G  P+V T+
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + LI+ F K   +++A    + M+     P ++ Y+ LI    KA ++   NEL    + 
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML----------------NGGFLPNVIS 355
           +G   +V+ +++++D Y   G++ +A Q Y RM                 N    PNV++
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 647

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  L+ GLC+  ++ +A  L   + +   EP+ + Y +LIDGFCK+ KL +   ++  M+
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707

Query: 416 KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G  P+    S LI+ L  D      L+   + +  +  PN+ I+  ++DG  ++ +  
Sbjct: 708 EHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTD 767

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  KL ++M     KP+V+T+T +I G    G +   + LF +M  +G  P+ +TY+ +I
Sbjct: 768 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827

Query: 531 HG-------------------LFKGKNIS--------------VGLHMFKLMERNGVAPD 557
           +                     +  K++S              + L + + +E+NG AP 
Sbjct: 828 NHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPI 887

Query: 558 IAIYNVLLNMLIKECNLDAALKL------------------------------------- 580
           I +Y VL++  +K   L+ AL+L                                     
Sbjct: 888 ILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFEL 947

Query: 581 FGQLTDRGLEPDIITYNTIICG 602
           F  +   G+ PD+ T+  ++ G
Sbjct: 948 FYDMIRDGVIPDLGTFVHLLMG 969



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 163/683 (23%), Positives = 297/683 (43%), Gaps = 112/683 (16%)

Query: 23  SKTHISDLQFNQ---ANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDM 79
            KTHI   QF Q    + ++  L    +P   ++FF W    +   +   +   LL    
Sbjct: 123 EKTHIVLRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFE 182

Query: 80  RDVASHVFDKMVIQ--------FGKTYN----------FFRLFRDSLG---DFG-----C 113
           R     V ++ + +         GK  N           + +  + LG   DFG      
Sbjct: 183 RGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRM 242

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
            Y+ L++ ++R  K+D +  +   MS++G+ +    +      L     VG++ +    +
Sbjct: 243 TYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALC---KVGKWREALSLI 299

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING-Q 228
             + F     +Y  +++GL      E A     ++     +PN+ T  +IL   C+N  Q
Sbjct: 300 EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQT-YRILLCGCLNKKQ 358

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +G    +  +++  G  P+   F++L++A+CK      A++L   M + +  P  ++Y+I
Sbjct: 359 LGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNI 418

Query: 289 LIDGLFKAGRL----------KEGNELLL--TALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           LI  +   G L          K  NE+L   T L+   K++VV F+  +    G G   +
Sbjct: 419 LIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLN---KVNVVSFARCL---CGFGKFEK 472

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV----------------- 379
           A +    M+  GF+P+  +YS +I  LC   R+  A  LF ++                 
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532

Query: 380 ------LIRRL------------EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
                 +I++             EP+++TY++LI  + K+ K+     L++ MI +G  P
Sbjct: 533 CFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592

Query: 422 DAVVCSLLING----------------LMGDA----LRFFFQ-SVRMTLIPNLFIFNTLM 460
           + +  + LI+G                + GDA    +  +F+    +   PN+  +  L+
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALV 652

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG C+  +  D   L   M +   +P+ I +  LI G      L  A  +F +M++ G  
Sbjct: 653 DGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYN 712

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+V TYS++I  LFK K + + L +   M  N  AP+I IY  +++ L K    D A KL
Sbjct: 713 PNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772

Query: 581 FGQLTDRGLEPDIITYNTIICGY 603
              + ++G +P+++TY  +I G+
Sbjct: 773 MLMMEEKGCKPNVVTYTAMIDGF 795



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/531 (23%), Positives = 235/531 (44%), Gaps = 37/531 (6%)

Query: 87  FDKMVIQFGKTYNFFRLFRDSLGD-FGCD---YSFLIENYVRIGKIDESVEIFAYMSDMG 142
           F + +  FGK    +++  + +G+ F  D   YS +I       +++ +  +F  M   G
Sbjct: 460 FARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519

Query: 143 IYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIEN 196
           +   PD+     L+ C   +  + Q +     M   G       Y  L++  L+   +  
Sbjct: 520 VV--PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSV 577

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF----------DVLLL----- 241
           A  +   +I +G  PN++T   ++   C +G I  A  ++          DV +      
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKN 637

Query: 242 -VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            V  KPNVVT+  L++  CK  K++ A  L   M      P+ I+Y  LIDG  KA +L 
Sbjct: 638 NVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLD 697

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  E+    ++ G   +V  +SS++D       +   ++   +ML     PN++ Y+ +I
Sbjct: 698 EAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMI 757

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GL +  +  EA  L   +  +  +P+++TY+++IDGF K+GK+     L+  M  +G  
Sbjct: 758 DGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCA 817

Query: 421 PDAVVCSLLINGLMG----DALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  ++LIN        D      + ++ T  P ++  +  +++G  R      ++ L
Sbjct: 818 PNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGL 875

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT--YSAIIHGL 533
              +      P ++ + VLI      G L  A+ L  +++   ++       Y+++I+  
Sbjct: 876 LEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSF 935

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
                I     +F  M R+GV PD+  +  LL  LI+    + AL+L   L
Sbjct: 936 SYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/270 (20%), Positives = 106/270 (39%), Gaps = 39/270 (14%)

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           R ++  D+ + G  L      ++LI+  C+ G    A    G++     +P+ +TY++L+
Sbjct: 195 REIRGDDKEVLGKLL------NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALV 248

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
             F ++ KL     ++  M + GL  D               L FF Q++          
Sbjct: 249 QVFLRADKLDTAQLVHREMSELGLSMDEFT------------LGFFAQAL---------- 286

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
                   C++ +  + + L   +   +  P+ I +  +I G+        A+    +M 
Sbjct: 287 --------CKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMR 335

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
                P+V TY  ++ G    K +     +  +M   G  P   I+N L++   K  +  
Sbjct: 336 STSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFS 395

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            A KL  ++     +P  + YN +I   CS
Sbjct: 396 YAYKLLKKMEKCECKPGYVVYNILIGSICS 425


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 221/435 (50%), Gaps = 16/435 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+ G  +   I  A ++  ++   G  P IVT   ++++LC       A  +F  +
Sbjct: 54  TYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQM 113

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           + +  KP+   ++ +I   CK  KL+ A   +  M++   +PD + Y++L+  LFKA + 
Sbjct: 114 IDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKW 173

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++G+++    L +G   ++V +++V++ Y   G + +A+    R+   G  P+   YS L
Sbjct: 174 EQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTL 233

Query: 360 IKGLCQQGRLVEACGLF----GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           I GLC+  R  EA  LF    G V        ++ Y+S I G CK+GKL +  +++  MI
Sbjct: 234 IDGLCKHDRHDEARELFEMAAGDV------QDVIVYTSFISGLCKAGKLDEAKAVHVKMI 287

Query: 416 KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G  PD V  +++I  L  D     A     Q++    +P + +   L+DG C+ +R  
Sbjct: 288 EAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVE 347

Query: 471 DT-VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           +  V L  ++   +  P V+T++ +I G+     L  A ++  +M + G  PDV+TY+AI
Sbjct: 348 EACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAI 407

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I    K   +     +F+ M   G A D+  YN+L+    +   +D A+ +  ++  RG+
Sbjct: 408 IDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 467

Query: 590 EPDIITYNTIICGYC 604
           +P++++ +TI+ G C
Sbjct: 468 QPNVVSLSTIVDGLC 482



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 229/505 (45%), Gaps = 50/505 (9%)

Query: 101 FRLFRDSL------GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--R 152
           +R+F+D L       DF   Y  LI  + +  +I ++V +   M   GI  +P +V    
Sbjct: 37  YRVFKDELVTLFRPDDF--TYGTLIRGFCKAEQIPQAVNLLGEMKAAGI--TPTIVTFGS 92

Query: 153 LMSCLVDSNSVGQYYKLCRAM-----RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           L+  L + N   +  ++   M     +   F +Y  ++  L +   ++ A     +++Q 
Sbjct: 93  LIRKLCELNFTDKALQIFHQMIDMKVKPDAF-LYTVVIGHLCKINKLDLAASYFERMVQS 151

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G +P+ VT   ++  L    +      +F+ +L  G  P +VT++T++N +CK  ++++A
Sbjct: 152 GCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQA 211

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L   +      P   +YS LIDGL K  R  E  EL   A   G   DV+V++S +  
Sbjct: 212 LSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAA--GDVQDVIVYTSFISG 269

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G +  A   + +M+  G  P+ +SY+++I  LC+  R+ EA  L  Q + R+  P 
Sbjct: 270 LCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPG 329

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
           +   + L+DG CKS ++ +   + + M++ G +                           
Sbjct: 330 VPVCTVLVDGLCKSRRVEEACVILERMLETGDRA-------------------------- 363

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
              P++  ++ ++DG C+  R  D   +   M      PDV+T+T +I      G L  A
Sbjct: 364 ---PSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEA 420

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             LF +M +RG   DV+ Y+ +I G  +   +   + M + M   G+ P++   + +++ 
Sbjct: 421 RELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDG 480

Query: 568 LIKECNLDAALKLFGQLTDRGLEPD 592
           L KE  ++ A  L  ++    L PD
Sbjct: 481 LCKESRVEEARLLMEKMNFESL-PD 504



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 200/436 (45%), Gaps = 39/436 (8%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           GF  N  TCN +L+    +G    A  +F   L+   +P+  T+ TLI  FCK  ++ +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L   M    + P ++ +  LI  L +     +  ++    +D  +K D  +++ V+  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
              I  +  A   ++RM+  G LP+ ++Y++L+  L +  +  +   +F ++L +   P 
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----MGDALRFFFQ 443
           L+TY+++++G+CK+G++    SL   +   G  P   + S LI+GL      D  R  F+
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251

Query: 444 -----------------------------SVRMTLI-----PNLFIFNTLMDGCCRLKRA 469
                                        +V + +I     P+   +N ++   C+  R 
Sbjct: 252 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 311

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG-LTPDVITYSA 528
           ++  +L          P V   TVL+ G+     +  A ++  +ML+ G   P V+TYSA
Sbjct: 312 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSA 371

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I GL K   +     + + M R G  PD+  Y  +++   K   LD A +LF ++ +RG
Sbjct: 372 VIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG 431

Query: 589 LEPDIITYNTIICGYC 604
              D++ YN +I GYC
Sbjct: 432 CALDVVAYNILIRGYC 447



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 38/298 (12%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GF  N  + + L++     G   EA  +F   L+    P   TY +LI GFCK+ ++   
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            +L   M   G+ P  V    LI  L        AL+ F Q + M + P+ F++  ++  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C++ +       F  M      PD +T+TVL+  +           +F +ML +G +P+
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           ++TY+ +++G  K   I   L + + ++  G +P  ++Y+ L++ L K    D A +LF 
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251

Query: 583 ---------------------------------QLTDRGLEPDIITYNTIICGYCSLN 607
                                            ++ + G  PD ++YN II   C  N
Sbjct: 252 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 1/127 (0%)

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L+    + G    A  +F   L     PD  TY  +I G  K + I   +++   M+  G
Sbjct: 23  LLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAG 82

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC-LID 612
           + P I  +  L+  L +    D AL++F Q+ D  ++PD   Y  +I   C +N   L  
Sbjct: 83  ITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAA 142

Query: 613 GYFKSQI 619
            YF+  +
Sbjct: 143 SYFERMV 149


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 210/393 (53%), Gaps = 10/393 (2%)

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPK---PNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
           +L R+C   ++  A   F    ++  K   P + T + +++ F K  ++E A+ LY  M 
Sbjct: 184 LLVRVCC--ELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
            + +   +  ++I+++ L K G+LK+  E +      G K +VV +++++  Y   G++ 
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A +  D M   G  P+  +Y  LI G+C++GRL EA GLF +++   L P+ +TY++LI
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 361

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDA-----VVCSLLINGLMGDALRFFFQSVRMTLI 450
           DG+C  G L   FS  D M+K+G+ P       +V +L + G MG+A     +  +  +I
Sbjct: 362 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 421

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P+   +N L++G  R   A     L   M    I+P  +T+T LI  ++ +  +  A  L
Sbjct: 422 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 481

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F ++L +G++PDVI ++A++ G     N+     + K M+R  V PD   +N L+    +
Sbjct: 482 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 541

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           E  ++ A  L  ++  RG++PD I+YNT+I GY
Sbjct: 542 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 574



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 222/430 (51%), Gaps = 5/430 (1%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
            L+   +E A+ ++ ++ +      + T N ++  LC  G++  A      +  +G KPN
Sbjct: 224 FLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPN 283

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           VV+++T+I+ +     +E A ++ + M    + PD   Y  LI G+ K GRL+E + L  
Sbjct: 284 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD 343

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             ++ GL  + V +++++D Y   GD+ RA    D M+  G +P+V +Y++L+  L  +G
Sbjct: 344 KMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEG 403

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           R+ EA  +  ++  + + P  +TY+ LI+G+ + G  +  F L++ M+ +G++P  V  +
Sbjct: 404 RMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYT 463

Query: 428 LLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            LI        M +A   F + +   + P++ +FN ++DG C          L   M   
Sbjct: 464 SLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRK 523

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
           ++ PD +T   L++G   +G +  A +L  +M +RG+ PD I+Y+ +I G  +  +I   
Sbjct: 524 SVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDA 583

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +   M   G  P +  YN L+  L K    D A +L  ++ ++G+ PD  TY ++I G
Sbjct: 584 FRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 643

Query: 603 YCSLNSCLID 612
             ++++ + D
Sbjct: 644 MGNVDTLVED 653



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 197/393 (50%), Gaps = 34/393 (8%)

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G GF      Y  +++G   +G IE A  +   +  +G  P+  T   ++  +C  G+
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 334

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  AS LFD ++ +G  PN VT++TLI+ +C +  LE+AF   + M++  ++P +  Y++
Sbjct: 335 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 394

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+  LF  GR+ E ++++     +G+  D + ++ +++ Y   G+  +A   ++ ML+ G
Sbjct: 395 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P  ++Y+ LI  L ++ R+ EA  LF ++L + + P ++ +++++DG C +G +   F
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 514

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L   M ++ + PD V                               FNTLM G CR  +
Sbjct: 515 MLLKEMDRKSVPPDEVT------------------------------FNTLMQGRCREGK 544

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   L   M    IKPD I++  LI G   +G +  A  +  +ML  G  P ++TY+A
Sbjct: 545 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 604

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           +I  L K +   +   + K M   G++PD + Y
Sbjct: 605 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 637



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 180/389 (46%), Gaps = 49/389 (12%)

Query: 228 QIGNASSLFDVLLLVGPKPNV---VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
           +I     LFD L L   + +V   + F  L+   C+  + ++AF+ + +M E  +VP + 
Sbjct: 156 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 215

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
             + ++    K  R++                          A+V           Y  M
Sbjct: 216 TCNDMLSLFLKLNRMEM-------------------------AWV----------LYAEM 240

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
                   V +++I++  LC++G+L +A    G +     +P++++Y+++I G+   G +
Sbjct: 241 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 300

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
                + D M  +G++PD+     LI+G+     + +A   F + V + L+PN   +NTL
Sbjct: 301 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 360

Query: 460 MDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           +DG C    L+RA       +  G   I P V T+ +L+  +  +G +  A  +  +M K
Sbjct: 361 IDGYCNKGDLERAFSYRDEMVKKG---IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 417

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +G+ PD ITY+ +I+G  +  N      +   M   G+ P    Y  L+ +L +   +  
Sbjct: 418 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 477

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           A  LF ++ D+G+ PD+I +N ++ G+C+
Sbjct: 478 ADDLFEKILDQGVSPDVIMFNAMVDGHCA 506



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 146/371 (39%), Gaps = 91/371 (24%)

Query: 68  AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGK 127
             LI  + +    + AS +FDKMV + G   N               Y+ LI+ Y   G 
Sbjct: 323 GSLISGMCKEGRLEEASGLFDKMV-EIGLVPN------------AVTYNTLIDGYCNKGD 369

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEF 183
           ++ +      M   GI  S      L+  L     +G+   + + MR KG       Y  
Sbjct: 370 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 429

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NG  R G  + AF +H +++ +G  P  VT   ++  L    ++  A  LF+ +L  G
Sbjct: 430 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 489

Query: 244 PKPNV-----------------------------------VTFSTLINAFCKEAKLEKAF 268
             P+V                                   VTF+TL+   C+E K+E+A 
Sbjct: 490 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 549

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            L + M    + PD I Y+ LI G                                   Y
Sbjct: 550 MLLDEMKRRGIKPDHISYNTLISG-----------------------------------Y 574

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC--QQGRLVEACGLFGQVLIRRLEP 386
              GD+  A +  D ML+ GF P +++Y+ LIK LC  Q+G L E   L  +++ + + P
Sbjct: 575 GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE--LLKEMVNKGISP 632

Query: 387 SLLTYSSLIDG 397
              TY SLI+G
Sbjct: 633 DDSTYLSLIEG 643



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN----SVGQYYKLC 170
           Y+ LI    R  ++ E+ ++F  + D G+  SPD++  + + +VD +    +V + + L 
Sbjct: 462 YTSLIYVLSRRNRMKEADDLFEKILDQGV--SPDVI--MFNAMVDGHCANGNVERAFMLL 517

Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           + M  K        +  LM G  R+G +E A  +  ++ +RG  P+ ++ N ++      
Sbjct: 518 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 577

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G I +A  + D +L +G  P ++T++ LI   CK  + + A +L   M+   + PD   Y
Sbjct: 578 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 637

Query: 287 SILIDGLFKAGRLKEGN 303
             LI+G+     L E N
Sbjct: 638 LSLIEGMGNVDTLVEDN 654


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 245/505 (48%), Gaps = 13/505 (2%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSD----MGIYLSPDLVQRLMSCLVDSNSVGQYY 167
           GC Y+ L+ +  R G +DE  +++  M +      IY    +V      L +     QY 
Sbjct: 184 GC-YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK-LGNVEEANQYV 241

Query: 168 -KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            K+  A     F  Y  L+ G  ++  +++AF +  ++  +G   N V    ++  LC+ 
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            +I  A  LF  +      P V T++ LI + C   +  +A  L   M E  + P++  Y
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++LID L    + ++  ELL   L++GL  +V+ ++++++ Y   G +  AV   + M +
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
               PN  +Y+ LIKG C+   + +A G+  ++L R++ P ++TY+SLIDG C+SG    
Sbjct: 422 RKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            + L   M  RGL PD    + +I+ L     + +A   F    +  + PN+ ++  L+D
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+  +  +   +   M   N  P+ +T   LI G+ + G L  A LL  +M+K GL P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            V T + +IH L K  +       F+ M  +G  PD   Y   +    +E  L  A  + 
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660

Query: 582 GQLTDRGLEPDIITYNTIICGYCSL 606
            ++ + G+ PD+ TY+++I GY  L
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDL 685



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 217/514 (42%), Gaps = 62/514 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN---SVGQYYKLCR 171
           Y+ LI  Y + G I+++V++   M    +  +      L+     SN   ++G   K+  
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLE 455

Query: 172 AMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
                    Y  L++G  R G  ++A+ +   +  RG VP+  T   ++  LC + ++  
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  LFD L   G  PNVV ++ LI+ +CK  K+++A  +   M+  + +P+ + ++ LI 
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL   G+LKE   L    +  GL+  V   + ++   +  GD   A   + +ML+ G  P
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  +Y+  I+  C++GRL++A  +  ++    + P L TYSSLI G+   G+    F + 
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----------------MGDALRF------FFQSVRMT 448
             M   G +P       LI  L                 M + + F        + V  +
Sbjct: 696 KRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHS 755

Query: 449 LIPNL------------------------------------FIFNTLMDGCCRLKRATDT 472
           + PN                                      +FN L+  CC+LK+  + 
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            K+   M      P + +  VLI G+  +G       +F  +L+ G   D + +  II G
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDG 875

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           + K   +     +F +ME+NG       Y++L+ 
Sbjct: 876 VGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 157/295 (53%), Gaps = 6/295 (2%)

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
           KL +  +++++++    G V    Q Y  ML     PN+ +Y+ ++ G C+ G + EA  
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ 239

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
              +++   L+P   TY+SLI G+C+   L   F +++ M  +G + + V  + LI+GL 
Sbjct: 240 YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               + +A+  F +       P +  +  L+   C  +R ++ + L   M    IKP++ 
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+TVLI  + SQ     A  L  QML++GL P+VITY+A+I+G  K   I   + + +LM
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           E   ++P+   YN L+    K  N+  A+ +  ++ +R + PD++TYN++I G C
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 5/257 (1%)

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ L+  L + G + E   ++ ++L  ++ P++ TY+ +++G+CK G + +       ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + GL PD    + LI G      +  A + F +        N   +  L+ G C  +R  
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + + LF+ M      P V T+TVLI+ +      S A+ L  +M + G+ P++ TY+ +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
             L           +   M   G+ P++  YN L+N   K   ++ A+ +   +  R L 
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 591 PDIITYNTIICGYCSLN 607
           P+  TYN +I GYC  N
Sbjct: 426 PNTRTYNELIKGYCKSN 442



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 20/252 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD---SNSVGQYYKLCR 171
           YS LI+ Y  +G+ + + ++   M D G   S      L+  L++       G   +LC 
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC- 733

Query: 172 AMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           AM      + EF           +    +  ++++    PN  +  K++  +C  G +  
Sbjct: 734 AMSN----MMEF-----------DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778

Query: 232 ASSLFDVLLL-VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           A  +FD +    G  P+ + F+ L++  CK  K  +A ++ + M+ +  +P L    +LI
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL+K G  + G  +    L  G   D + +  ++D     G V    + ++ M   G  
Sbjct: 839 CGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898

Query: 351 PNVISYSILIKG 362
            +  +YS+LI+G
Sbjct: 899 FSSQTYSLLIEG 910


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 210/393 (53%), Gaps = 10/393 (2%)

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPK---PNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
           +L R+C   ++  A   F    ++  K   P + T + +++ F K  ++E A+ LY  M 
Sbjct: 162 LLVRVCC--ELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
            + +   +  ++I+++ L K G+LK+  E +      G K +VV +++++  Y   G++ 
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A +  D M   G  P+  +Y  LI G+C++GRL EA GLF +++   L P+ +TY++LI
Sbjct: 280 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 339

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDA-----VVCSLLINGLMGDALRFFFQSVRMTLI 450
           DG+C  G L   FS  D M+K+G+ P       +V +L + G MG+A     +  +  +I
Sbjct: 340 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 399

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P+   +N L++G  R   A     L   M    I+P  +T+T LI  ++ +  +  A  L
Sbjct: 400 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 459

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F ++L +G++PDVI ++A++ G     N+     + K M+R  V PD   +N L+    +
Sbjct: 460 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 519

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           E  ++ A  L  ++  RG++PD I+YNT+I GY
Sbjct: 520 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 552



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 220/424 (51%), Gaps = 5/424 (1%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +E A+ ++ ++ +      + T N ++  LC  G++  A      +  +G KPNVV+++T
Sbjct: 208 MEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNT 267

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +I+ +     +E A ++ + M    + PD   Y  LI G+ K GRL+E + L    ++ G
Sbjct: 268 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 327

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L  + V +++++D Y   GD+ RA    D M+  G +P+V +Y++L+  L  +GR+ EA 
Sbjct: 328 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 387

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI--- 430
            +  ++  + + P  +TY+ LI+G+ + G  +  F L++ M+ +G++P  V  + LI   
Sbjct: 388 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 447

Query: 431 --NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                M +A   F + +   + P++ +FN ++DG C          L   M   ++ PD 
Sbjct: 448 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 507

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T   L++G   +G +  A +L  +M +RG+ PD I+Y+ +I G  +  +I     +   
Sbjct: 508 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 567

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           M   G  P +  YN L+  L K    D A +L  ++ ++G+ PD  TY ++I G  ++++
Sbjct: 568 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDT 627

Query: 609 CLID 612
            + D
Sbjct: 628 LVED 631



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 197/393 (50%), Gaps = 34/393 (8%)

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G GF      Y  +++G   +G IE A  +   +  +G  P+  T   ++  +C  G+
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 312

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  AS LFD ++ +G  PN VT++TLI+ +C +  LE+AF   + M++  ++P +  Y++
Sbjct: 313 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 372

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+  LF  GR+ E ++++     +G+  D + ++ +++ Y   G+  +A   ++ ML+ G
Sbjct: 373 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 432

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P  ++Y+ LI  L ++ R+ EA  LF ++L + + P ++ +++++DG C +G +   F
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 492

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L   M ++ + PD V                               FNTLM G CR  +
Sbjct: 493 MLLKEMDRKSVPPDEVT------------------------------FNTLMQGRCREGK 522

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   L   M    IKPD I++  LI G   +G +  A  +  +ML  G  P ++TY+A
Sbjct: 523 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 582

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           +I  L K +   +   + K M   G++PD + Y
Sbjct: 583 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 615



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 180/389 (46%), Gaps = 49/389 (12%)

Query: 228 QIGNASSLFDVLLLVGPKPNV---VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
           +I     LFD L L   + +V   + F  L+   C+  + ++AF+ + +M E  +VP + 
Sbjct: 134 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 193

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
             + ++    K  R++                          A+V           Y  M
Sbjct: 194 TCNDMLSLFLKLNRMEM-------------------------AWV----------LYAEM 218

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
                   V +++I++  LC++G+L +A    G +     +P++++Y+++I G+   G +
Sbjct: 219 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 278

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
                + D M  +G++PD+     LI+G+     + +A   F + V + L+PN   +NTL
Sbjct: 279 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 338

Query: 460 MDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           +DG C    L+RA       +  G   I P V T+ +L+  +  +G +  A  +  +M K
Sbjct: 339 IDGYCNKGDLERAFSYRDEMVKKG---IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +G+ PD ITY+ +I+G  +  N      +   M   G+ P    Y  L+ +L +   +  
Sbjct: 396 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 455

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           A  LF ++ D+G+ PD+I +N ++ G+C+
Sbjct: 456 ADDLFEKILDQGVSPDVIMFNAMVDGHCA 484



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 146/371 (39%), Gaps = 91/371 (24%)

Query: 68  AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGK 127
             LI  + +    + AS +FDKMV + G   N               Y+ LI+ Y   G 
Sbjct: 301 GSLISGMCKEGRLEEASGLFDKMV-EIGLVPN------------AVTYNTLIDGYCNKGD 347

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEF 183
           ++ +      M   GI  S      L+  L     +G+   + + MR KG       Y  
Sbjct: 348 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 407

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NG  R G  + AF +H +++ +G  P  VT   ++  L    ++  A  LF+ +L  G
Sbjct: 408 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467

Query: 244 PKPNV-----------------------------------VTFSTLINAFCKEAKLEKAF 268
             P+V                                   VTF+TL+   C+E K+E+A 
Sbjct: 468 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 527

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            L + M    + PD I Y+ LI G                                   Y
Sbjct: 528 MLLDEMKRRGIKPDHISYNTLISG-----------------------------------Y 552

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC--QQGRLVEACGLFGQVLIRRLEP 386
              GD+  A +  D ML+ GF P +++Y+ LIK LC  Q+G L E   L  +++ + + P
Sbjct: 553 GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE--LLKEMVNKGISP 610

Query: 387 SLLTYSSLIDG 397
              TY SLI+G
Sbjct: 611 DDSTYLSLIEG 621



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN----SVGQYYKLC 170
           Y+ LI    R  ++ E+ ++F  + D G+  SPD++  + + +VD +    +V + + L 
Sbjct: 440 YTSLIYVLSRRNRMKEADDLFEKILDQGV--SPDVI--MFNAMVDGHCANGNVERAFMLL 495

Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           + M  K        +  LM G  R+G +E A  +  ++ +RG  P+ ++ N ++      
Sbjct: 496 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 555

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G I +A  + D +L +G  P ++T++ LI   CK  + + A +L   M+   + PD   Y
Sbjct: 556 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 615

Query: 287 SILIDGLFKAGRLKEGN 303
             LI+G+     L E N
Sbjct: 616 LSLIEGMGNVDTLVEDN 632


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 237/501 (47%), Gaps = 31/501 (6%)

Query: 134 IFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG----KGFCVYEFLMNGLL 189
           I + M   G Y S  +   L+     S+     YKL + M       G+ VY  L+  + 
Sbjct: 365 ILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC 424

Query: 190 RKG------VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
             G        E A   + +++  G V N V      + LC  G+   A  +   ++  G
Sbjct: 425 SGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG 484

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+  T+S +I   C  +++E AF L+  M    +VPD+  Y+ILID   KAG +K+ +
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH 544

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
             L   +  G +  VV +++++ AY+    V  A + ++ M+  G  PNVI+Y+ LI G 
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604

Query: 364 CQQGRLVEACGLF----GQVLIRRLE------------PSLLTYSSLIDGFCKSGKLRDG 407
           C+ G + +AC ++    G   I  ++            P+++TY +L+DG CK+ K++D 
Sbjct: 605 CKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDA 664

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L + M   G +P+ +V   LI+G      + +A   F + V     PN++ +++L+D 
Sbjct: 665 RDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDR 724

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             + KR    +K+   M   +  P+++ +T +I G++       A  L   M ++G  P+
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V+TY+A+I G  K   +   L +F+ M   G AP+   Y VL+N      +LD A  L  
Sbjct: 785 VVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLE 844

Query: 583 QLTDRGLEPDIITYNTIICGY 603
           ++        + +Y  +I GY
Sbjct: 845 EMKQTYWPKHVSSYCKVIEGY 865



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 229/502 (45%), Gaps = 91/502 (18%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G  E A+ +  +++  GFVP+  T ++++  LC   ++ NA  LF  +   G  P+V T+
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + LI+ F K   +++A    + M+     P ++ Y+ LI    KA ++   NEL    + 
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML----------------NGGFLPNVIS 355
           +G   +V+ +++++D Y   G++ +A Q Y RM                 N    PNV++
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 647

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  L+ GLC+  ++ +A  L   + +   EP+ + Y +LIDGFCK+ KL +   ++  M+
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707

Query: 416 KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +RG  P+    S LI+ L  D      L+   + +  +  PN+ I+  ++DG  ++ +  
Sbjct: 708 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTD 767

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  KL ++M     KP+V+T+T +I G    G +   + LF +M  +G  P+ +TY+ +I
Sbjct: 768 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827

Query: 531 HG-------------------LFKGKNIS--------------VGLHMFKLMERNGVAPD 557
           +                     +  K++S              + L + + +E+NG AP 
Sbjct: 828 NHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPT 887

Query: 558 IAIYNVLLNMLIKECNLDAALK-------------------------------------L 580
           I +Y VL++  +K   L+ AL+                                     L
Sbjct: 888 ILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFEL 947

Query: 581 FGQLTDRGLEPDIITYNTIICG 602
           F  +   G+ PD+ T+  ++ G
Sbjct: 948 FYDMIRDGVIPDLGTFVHLLMG 969



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 164/683 (24%), Positives = 298/683 (43%), Gaps = 112/683 (16%)

Query: 23  SKTHISDLQFNQ---ANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDM 79
            KTHI   QF Q    + ++  L    +P   ++FF W    +   +   +   LL    
Sbjct: 123 EKTHIVLRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFE 182

Query: 80  RDVASHVFDKMVIQ--------FGKTYN----------FFRLFRDSLG---DFG-----C 113
           R     V ++ + +         GK  N           + +  + LG   DFG      
Sbjct: 183 RGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRM 242

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
            Y+ L++ ++R  K+D +  +   MS++G+ +    +      L     VG++ +    +
Sbjct: 243 TYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALC---KVGKWREALSLI 299

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING-Q 228
             + F     +Y  +++GL      E A     ++     +PN+ T  +IL   C+N  Q
Sbjct: 300 EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQT-YRILLCGCLNKKQ 358

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +G    +  +++  G  P+   F++L++A+CK      A++L   M + +  P  ++Y+I
Sbjct: 359 LGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNI 418

Query: 289 LIDGLFKAGRL----------KEGNELLL--TALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           LI  +   G L          K  NE+L   T L+   K++VV F+  +    G G   +
Sbjct: 419 LIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLN---KVNVVSFARCL---CGFGKFEK 472

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV----------------- 379
           A +    M+  GF+P+  +YS +I  LC   R+  A  LF ++                 
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532

Query: 380 ------LIRRL------------EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
                 +I++             EP+++TY++LI  + K+ K+     L++ MI +G  P
Sbjct: 533 CFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592

Query: 422 DAVVCSLLING----------------LMGDA----LRFFFQ-SVRMTLIPNLFIFNTLM 460
           + +  + LI+G                + GDA    +  +F+    +   PN+  +  L+
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALV 652

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG C+  +  D   L   M +   +P+ I +  LI G      L  A  +F +M++RG  
Sbjct: 653 DGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYN 712

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+V TYS++I  LFK K + + L +   M  N  AP+I IY  +++ L K    D A KL
Sbjct: 713 PNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772

Query: 581 FGQLTDRGLEPDIITYNTIICGY 603
              + ++G +P+++TY  +I G+
Sbjct: 773 MLMMEEKGCKPNVVTYTAMIDGF 795



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 236/531 (44%), Gaps = 37/531 (6%)

Query: 87  FDKMVIQFGKTYNFFRLFRDSLGD-FGCD---YSFLIENYVRIGKIDESVEIFAYMSDMG 142
           F + +  FGK    +++  + +G+ F  D   YS +I       +++ +  +F  M   G
Sbjct: 460 FARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519

Query: 143 IYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIEN 196
           +   PD+     L+ C   +  + Q +     M   G       Y  L++  L+   +  
Sbjct: 520 VV--PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSV 577

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF----------DVLLL----- 241
           A  +   +I +G  PN++T   ++   C +G I  A  ++          DV +      
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKN 637

Query: 242 -VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            V  KPNVVT+  L++  CK  K++ A  L   M      P+ I+Y  LIDG  KA +L 
Sbjct: 638 NVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLD 697

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  E+    ++RG   +V  +SS++D       +   ++   +ML     PN++ Y+ +I
Sbjct: 698 EAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMI 757

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GL +  +  EA  L   +  +  +P+++TY+++IDGF K+GK+     L+  M  +G  
Sbjct: 758 DGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCA 817

Query: 421 PDAVVCSLLINGLMG----DALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  ++LIN        D      + ++ T  P ++  +  +++G  R      ++ L
Sbjct: 818 PNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGL 875

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR--GLTPDVITYSAIIHGL 533
              +      P ++ + VLI      G L  A+ L  +++     +T     Y+++I+  
Sbjct: 876 LEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSF 935

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
                I     +F  M R+GV PD+  +  LL  LI+    + AL+L   L
Sbjct: 936 SYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/270 (20%), Positives = 106/270 (39%), Gaps = 39/270 (14%)

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           R ++  D+ + G  L      ++LI+  C+ G    A    G++     +P+ +TY++L+
Sbjct: 195 REIRGDDKEVLGKLL------NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALV 248

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
             F ++ KL     ++  M + GL  D               L FF Q++          
Sbjct: 249 QVFLRADKLDTAQLVHREMSELGLSMDEFT------------LGFFAQAL---------- 286

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
                   C++ +  + + L   +   +  P+ I +  +I G+        A+    +M 
Sbjct: 287 --------CKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMR 335

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
                P+V TY  ++ G    K +     +  +M   G  P   I+N L++   K  +  
Sbjct: 336 STSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFS 395

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            A KL  ++     +P  + YN +I   CS
Sbjct: 396 YAYKLLKKMEKCECKPGYVVYNILIGSICS 425


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 273/595 (45%), Gaps = 38/595 (6%)

Query: 33  NQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVI 92
           N A+A L  LI   +   A++  + + +C        L   L+++             + 
Sbjct: 41  NPASAHLRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRN-------------LC 87

Query: 93  QFGKTYNFFRLFRDSLGDFGC----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           + G+T +  R+ R + G         Y+ L+  Y R G +D +  +   M      ++PD
Sbjct: 88  RRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP-----VAPD 142

Query: 149 --LVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHR 202
                 L+  L D   V     L   M  +G       Y  L+  + R    E A  +  
Sbjct: 143 AYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLD 202

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++  +G  PNIVT N I+  +C  G++ +A  L + L   G +P+ V+++TL+   C   
Sbjct: 203 EMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASK 262

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           + +   +L+  MME + +P+ + + +LI    + G ++   ++L    + G   +  + +
Sbjct: 263 RWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCN 322

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            V+++    G V  A +  + M + G  P+ ISY+ ++KGLC+  R  +A  L  +++  
Sbjct: 323 IVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRN 382

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
              P+ +T+++ I   C+ G +     L + M + G     V  + L+NG      +  A
Sbjct: 383 NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSA 442

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           L  F     M   PN   + TL+ G C  +R     +L   M   +  P+V+T  VL+  
Sbjct: 443 LELFRS---MPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSF 499

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
              +G L  AI L  QM++ G TP++ITY+ ++ G+ K  +    L +   +   GV+PD
Sbjct: 500 FCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPD 559

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
           +  ++ ++ +L KE  ++ A++LF  + D G+ P  + YN I+ G C    C ID
Sbjct: 560 VITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCK--RCEID 612



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 205/411 (49%), Gaps = 13/411 (3%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P++  C K+++ LC  G+  +A+ +       G   +V  ++TL+  +C+   L+ A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +   L+  M + PD   Y+ LI  L   GR+ +   LL   L RG + +VV ++ +++A
Sbjct: 131 RR---LIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                   +A+   D M   G  PN+++Y+++I G+C++GR+ +A  L  ++     +P 
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
            ++Y++L+ G C S +  D   L+  M+++   P+ V   +LI      G++  A++   
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           Q        N  + N +++  C+  R  D  KL   MG Y   PD I++T +++G+    
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
               A  L  +M++    P+ +T++  I  L +   I   + + + M  +G    +  YN
Sbjct: 368 RWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYN 427

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
            L+N    + ++D+AL+LF  +     +P+ ITY T++ G C  N+  +DG
Sbjct: 428 ALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLC--NAERLDG 473



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 160/338 (47%), Gaps = 13/338 (3%)

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           + + G+  + F+L  D +G +GC+     Y+ +++   R  + D++ E+   M       
Sbjct: 328 ICKQGRVDDAFKLLND-MGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPP 386

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMH 201
           +       +  L     + Q   L   M   G  V    Y  L+NG   +G I++A  + 
Sbjct: 387 NEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF 446

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           R +  +   PN +T   +L  LC   ++  A+ L   +L     PNVVTF+ L++ FC++
Sbjct: 447 RSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQK 503

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
             LE+A +L   MME    P+LI Y+ L+DG+ K    ++  ELL   + +G+  DV+ F
Sbjct: 504 GFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITF 563

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           SS++        +  AVQ +  + + G  P  + Y+ ++ GLC++  +  A   F  ++ 
Sbjct: 564 SSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVS 623

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
               P+  TY  LI+G    G L++   L   +  RG+
Sbjct: 624 NGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 226/429 (52%), Gaps = 5/429 (1%)

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           E L    LR   + +A  +   +++    P+IV  N++L  +    +     SL   + +
Sbjct: 54  ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G + ++ TF+ +IN FC   ++  A  +   M+++   PD +    L++G  +  R+ +
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              L+   ++ G K D+V +++++D+      V  A   +  +   G  PNV++Y+ L+ 
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GLC   R  +A  L   ++ +++ P+++TYS+L+D F K+GK+ +   L++ M++  + P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D V  S L+NGL     + +A + F   V    + ++  +NTL++G C+ KR  D +KLF
Sbjct: 294 DIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    +  + +T+  LI+G    G +  A   F QM   G++PD+ TY+ ++ GL   
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +   L +F+ M++  +  DI  Y  ++  + K   ++ A  LF  L+ +GL+PDI+TY
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473

Query: 597 NTIICGYCS 605
            T++ G C+
Sbjct: 474 TTMMSGLCT 482



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 198/387 (51%), Gaps = 5/387 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   ++ T N ++   C   Q+  A S+   +L +G +P+ VT  +L+N FC+  ++  A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L + M+E+   PD++ Y+ +ID L K  R+ +  +       +G++ +VV ++++++ 
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                    A +    M+     PNVI+YS L+    + G+++EA  LF +++   ++P 
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++TYSSL++G C   ++ +   ++D M+ +G   D V  + LING      + D ++ F 
Sbjct: 295 IVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +  +  L+ N   +NTL+ G  +        + F  M  + I PD+ T+ +L+ G+   G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A+++F  M KR +  D++TY+ +I G+ K   +     +F  +   G+ PDI  Y 
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGL 589
            +++ L  +  L     L+ ++   GL
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 196/380 (51%), Gaps = 13/380 (3%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NG  R+  + +A  +  ++++ G+ P+IV  N I+  LC   ++ +A   F  +   G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PNVVT++ L+N  C  ++   A +L + M++  + P++I YS L+D   K G++ E  
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL    +   +  D+V +SS+++       +  A Q +D M++ G L +V+SY+ LI G 
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+  R+ +   LF ++  R L  + +TY++LI GF ++G +      +  M   G+ PD 
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400

Query: 424 VVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              ++L+     NG +  AL  F    +  +  ++  + T++ G C+  +  +   LF  
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           + +  +KPD++T+T ++ G+ ++G L     L+ +M + GL  +  T S          +
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGD 512

Query: 539 ISVGLHMFKLMERNGVAPDI 558
           I++   + K M   G AP +
Sbjct: 513 ITLSAELIKKMLSCGYAPSL 532



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 181/322 (56%), Gaps = 8/322 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG 175
           L+  + R  ++ ++V +   M ++G    PD+V    ++  L  +  V   +   + +  
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIG--YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           KG       Y  L+NGL       +A  +   +I++   PN++T + +L     NG++  
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  LF+ ++ +   P++VT+S+L+N  C   ++++A Q+++LM+    + D++ Y+ LI+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G  KA R+++G +L      RGL  + V +++++  +   GDV +A + + +M   G  P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           ++ +Y+IL+ GLC  G L +A  +F  +  R ++  ++TY+++I G CK+GK+ + +SL+
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 412 DNMIKRGLKPDAVVCSLLINGL 433
            ++  +GLKPD V  + +++GL
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGL 480



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 166/309 (53%), Gaps = 4/309 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I++  +  +++++ + F  +   GI  +      L++ L +S+      +L   M 
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K        Y  L++  ++ G +  A  +  ++++    P+IVT + ++  LC++ +I 
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRID 312

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ +FD+++  G   +VV+++TLIN FCK  ++E   +L+  M +  LV + + Y+ LI
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G F+AG + +  E        G+  D+  ++ ++      G++ +A+  ++ M      
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            ++++Y+ +I+G+C+ G++ EA  LF  + ++ L+P ++TY++++ G C  G L +  +L
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492

Query: 411 YDNMIKRGL 419
           Y  M + GL
Sbjct: 493 YTKMKQEGL 501



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 167/376 (44%), Gaps = 34/376 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           NAI+ +L KT     A  FFK        PN+     L++ L  S     A+ +   M I
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-I 252

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           +   T N               YS L++ +V+ GK+ E+ E+F  M  M I   PD+V  
Sbjct: 253 KKKITPNVIT------------YSALLDAFVKNGKVLEAKELFEEMVRMSI--DPDIVTY 298

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L++ L   + + +  ++   M  KG       Y  L+NG  +   +E+   + R++ Q
Sbjct: 299 SSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           RG V N VT N +++     G +  A   F  +   G  P++ T++ L+   C   +LEK
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  ++  M + ++  D++ Y+ +I G+ K G+++E   L  +   +GLK D+V ++++M 
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G +      Y +M   G + N  + S         G +  +  L  ++L     P
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAP 530

Query: 387 SLLTYSSLIDGFCKSG 402
           SLL    +  G CK  
Sbjct: 531 SLL--KDIKSGVCKKA 544



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 55/104 (52%)

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L+ AI LF  M+K    P ++ ++ ++  + K K   V + + K ME  G+  D+  +N+
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           ++N       +  AL + G++   G EPD +T  +++ G+C  N
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 221/427 (51%), Gaps = 5/427 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++  L++         + +++  RG  PN V  N ++   C  G I  A S+   +L +G
Sbjct: 76  ILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMG 135

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +P+ +T +T I  FC + ++ +A   ++ ++ +    D + Y  LI+GL K G  +   
Sbjct: 136 YEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 195

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           ELL     + ++LDVV++S+++D+     +V  A   Y  M++     N+++YS LI G 
Sbjct: 196 ELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGF 255

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C  G+L +A GLF ++    + P + T++ L+D FCK G++++  +    M+K+G+KPD 
Sbjct: 256 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDI 315

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  + L++G      +  A           +   +  +N +++G C++K     +KLF  
Sbjct: 316 VTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKE 375

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    I P+VIT+  LI G+   G +S A+ L   M  RG  PD+ITYS+I+  L K   
Sbjct: 376 MHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHL 435

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   + +   ++  G+ P++  Y +L++ L K   L+ A  +F  L  +G    + TY  
Sbjct: 436 VDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTV 495

Query: 599 IICGYCS 605
           +I G+CS
Sbjct: 496 MIQGFCS 502



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 240/466 (51%), Gaps = 10/466 (2%)

Query: 147 PDL-VQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMH 201
           PD+   +++  LV S        L + M  +G    F  +  L+N   + G+I  AF + 
Sbjct: 69  PDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVL 128

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            ++++ G+ P+ +T N  +K  C+ GQI  A +  D L+ +G   + V++ TLIN  CK 
Sbjct: 129 AKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKV 188

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            +   A +L   +    +  D+++YS +ID + K   + +  +L    + R +  ++V +
Sbjct: 189 GETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTY 248

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           S+++  +  +G +  A+  +++M +    P+V +++IL+   C++GR+ EA      ++ 
Sbjct: 249 SALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMK 308

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGD 436
           + ++P ++TY+SL+DG+C   ++    S+ + M  RG+       +++ING     ++  
Sbjct: 309 QGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQ 368

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A++ F +     + PN+  +N+L+DG C+  R +  ++L  LM     +PD+IT++ ++ 
Sbjct: 369 AMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILD 428

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
            +     +  AI L  ++  +G+ P++ TY+ +I GL KG  +    ++F+ +   G   
Sbjct: 429 ALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNL 488

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            +  Y V++         D AL L  ++ D    PD ITY  IIC 
Sbjct: 489 TVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICS 534



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 242/509 (47%), Gaps = 42/509 (8%)

Query: 39  LANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTY 98
           L N +   NPTP    F             Q++  L++S        +F KM  + G   
Sbjct: 57  LFNCLLRQNPTPPDMEF------------GQILGSLVKSKHYHTVLSLFQKMEYR-GIKP 103

Query: 99  NFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSC 156
           NF             +++ LI  + ++G I  +  + A +  MG    PD +     +  
Sbjct: 104 NFV------------NFNILINCFCQLGLIPFAFSVLAKILKMG--YEPDTITLNTFIKG 149

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                 + Q       +   GF +    Y  L+NGL + G    A  + R+V  +    +
Sbjct: 150 FCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLD 209

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +V  + I+  +C +  + +A  L+  ++      N+VT+S LI+ FC   KL+ A  L+N
Sbjct: 210 VVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFN 269

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M   ++ PD+  ++IL+D   K GR+KE    L   + +G+K D+V ++S+MD Y  + 
Sbjct: 270 KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVN 329

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           +V  A    + M + G    V SY+I+I G C+   + +A  LF ++  +++ P+++TY+
Sbjct: 330 EVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYN 389

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRM 447
           SLIDG CKSG++     L D M  RG +PD +  S ++     N L+  A+    +    
Sbjct: 390 SLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQ 449

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLS 505
            + PN++ +  L+DG C+  R  D   +F  +L+  YN+   V T+TV+I+G  S G   
Sbjct: 450 GIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLT--VNTYTVMIQGFCSHGLFD 507

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLF 534
            A+ L  +M      PD ITY  II  LF
Sbjct: 508 EALSLLSKMKDNSCIPDAITYEIIICSLF 536



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 191/384 (49%), Gaps = 5/384 (1%)

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           N  + +A SLF+ LL   P P  + F  ++ +  K         L+  M    + P+ + 
Sbjct: 48  NNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVN 107

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           ++ILI+   + G +     +L   L  G + D +  ++ +  +   G + +A+  +D+++
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             GF  + +SY  LI GLC+ G    A  L  +V  + ++  ++ YS++ID  CK   + 
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
           D F LY  M+ R +  + V  S LI+G      + DA+  F +     + P+++ FN L+
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILV 287

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           D  C+  R  +      +M    IKPD++T+  L+ G      ++ A  +   M  RG+T
Sbjct: 288 DAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVT 347

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
             V +Y+ +I+G  K K +   + +FK M    + P++  YN L++ L K   +  AL+L
Sbjct: 348 ATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALEL 407

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
              + DRG +PDIITY++I+   C
Sbjct: 408 IDLMHDRGQQPDIITYSSILDALC 431



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 221/476 (46%), Gaps = 37/476 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS--CLVDS--NSVGQYYKLC 170
           YS +I++  +   ++++ ++++ M    I  +      L+S  C+V    +++G + K+ 
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     +  L++   ++G ++ A +    ++++G  P+IVT N ++   C+  ++ 
Sbjct: 273 SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVN 332

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+ + +   G    V +++ +IN FCK   +++A +L+  M    + P++I Y+ LI
Sbjct: 333 MAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLI 392

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K+GR+    EL+    DRG + D++ +SS++DA      V +A+    ++ + G  
Sbjct: 393 DGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIR 452

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN+ +Y+ILI GLC+ GRL +A  +F  +L++    ++ TY+ +I GFC  G   +  SL
Sbjct: 453 PNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSL 512

Query: 411 YDNMIKRGLKPDAV-----VCSL----------------LINGLMGDALRFFFQSVRMTL 449
              M      PDA+     +CSL                +  GL+   L +   S+    
Sbjct: 513 LSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMA 572

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            P  F+ N  +  C   + + +  KL +          +    VL +       +    +
Sbjct: 573 APAHFLNNDSLQ-CTSSQESGNWAKLLL--------ERIYCDCVLTKSNMRDKDVECPSV 623

Query: 510 LFFQML---KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           + +      K+G   DV TY+ +I G          L +   ME NG  PD   Y+
Sbjct: 624 IIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 143/293 (48%), Gaps = 9/293 (3%)

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           F  ++ + V        +  + +M   G  PN ++++ILI   CQ G +  A  +  ++L
Sbjct: 73  FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD-- 436
               EP  +T ++ I GFC  G++    + +D ++  G   D V    LINGL  +G+  
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 192

Query: 437 ALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           A     + V   L+  ++ +++T++D  C+ K   D   L+  M    I  +++T++ LI
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G    G L  AI LF +M    + PDV T++ ++    K   +    +   +M + G+ 
Sbjct: 253 SGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK 312

Query: 556 PDIAIYNVLLN--MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           PDI  YN L++   L+ E N+  A  +   ++ RG+   + +YN +I G+C +
Sbjct: 313 PDIVTYNSLMDGYCLVNEVNM--AKSILNTMSHRGVTATVRSYNIVINGFCKI 363



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 141/281 (50%), Gaps = 5/281 (1%)

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           DV  AV  ++ +L     P  + +  ++  L +         LF ++  R ++P+ + ++
Sbjct: 50  DVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFN 109

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM 447
            LI+ FC+ G +   FS+   ++K G +PD +  +  I G      +  AL F  + V +
Sbjct: 110 ILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVAL 169

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
               +   + TL++G C++      ++L   +    ++ DV+ ++ +I  +    +++ A
Sbjct: 170 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             L+ +M+ R ++ +++TYSA+I G      +   + +F  M    + PD+  +N+L++ 
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDA 289

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
             KE  +  A      +  +G++PDI+TYN+++ GYC +N 
Sbjct: 290 FCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNE 330


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 222/437 (50%), Gaps = 12/437 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL-FDV 238
            Y  +++   R G ++ AF    +VI+ G+    +T + +LK LC   +   A  +    
Sbjct: 93  TYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRR 152

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD-----LVPDLIIYSILIDGL 293
           + ++G  PNV +++ L+   C E + ++A  L + MM  D       PD++ Y+ +I+GL
Sbjct: 153 MPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGL 212

Query: 294 FKAGR-LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
            + GR L     L    LD+GL  DVV ++S++ A      + +A     RM+  G +PN
Sbjct: 213 LREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPN 272

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
            I+++ L+ G C  G+  +A G+F ++    +EP + TY++L+   CK+G+  +   ++D
Sbjct: 273 RITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFD 332

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDA-----LRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           +M+KRG KP++     L++G   +             VR  + P+ +IFN L+    +  
Sbjct: 333 SMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHG 392

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  D + LF  M    + PD +T+ +++  +   G +  A+  F +++  GLTPD + + 
Sbjct: 393 KVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFR 452

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +IHGL           +   M   G+ P+   +N LLN L KE  +  A  +F  +   
Sbjct: 453 NLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRV 512

Query: 588 GLEPDIITYNTIICGYC 604
            ++ D+ITYNT+I GYC
Sbjct: 513 DVQRDVITYNTLIDGYC 529



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 228/476 (47%), Gaps = 16/476 (3%)

Query: 153 LMSCLVDSNSVGQYYKLCRAM------RG---KGFCVYEFLMNGLLRKG-VIENAFHMHR 202
           L+  L D N   Q   L   M      RG        Y  ++NGLLR+G  ++ A+H+  
Sbjct: 168 LLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFD 227

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           Q++ +G  P++VT N I+  L     +  A+ +   ++  G  PN +T ++L++ +C   
Sbjct: 228 QMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSG 287

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           K   A  ++  M    + PD+  Y+ L+  L K GR  E  ++  + + RG K +   + 
Sbjct: 288 KPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYG 347

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++  Y   G + +     D M+  G  P+   ++ILI    + G++ +A  LF ++  +
Sbjct: 348 TLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQ 407

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DA 437
            L P  +TY  ++D  C  GK+ D  + +  +I  GL PDAVV   LI+GL        A
Sbjct: 408 GLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKA 467

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                + +   + PN   FNTL++  C+         +F LM   +++ DVIT+  LI G
Sbjct: 468 EELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDG 527

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
               G +  A  L   M+  G+ P+ +TY+ +I+G  K   I     +F+ M   GV P 
Sbjct: 528 YCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPG 587

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
           I  Y+ +L  L +     AA +L+  +   G++ DI TYN I+ G C  N+C  D 
Sbjct: 588 IVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQ-NNCTDDA 642



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/530 (23%), Positives = 249/530 (46%), Gaps = 35/530 (6%)

Query: 81  DVASHVFDKMVIQFGK----TYN------------------FFRLFRDSLGDFGCDYSFL 118
           D A H+FD+M+ Q       TYN                    R+ ++        ++ L
Sbjct: 220 DTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSL 279

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVGQYYKLCRAMRGK 176
           +  Y   GK ++++ +F  M   G+   PD+     LM  L  +    +  K+  +M  +
Sbjct: 280 LHGYCSSGKPNDAIGVFKRMCRDGV--EPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKR 337

Query: 177 GF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G       Y  L++G   +G +    H+   +++ G  P+    N ++     +G++ +A
Sbjct: 338 GHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDA 397

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             LF  +   G  P+ VT+  +++A C   K++ A   +  ++   L PD +++  LI G
Sbjct: 398 MLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHG 457

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L    +  +  EL +  + RG+  + + F+++++     G V RA   +D M+      +
Sbjct: 458 LCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRD 517

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           VI+Y+ LI G C  G++ EA  L   +++  ++P+ +TY+++I+G+CK+G++ D FSL+ 
Sbjct: 518 VITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFR 577

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M  +G+ P  V  S ++ GL        A   +   ++  +  ++  +N ++ G C+  
Sbjct: 578 QMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNN 637

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
              D +++F  + + +   +  T  ++I  +   G    A  LF  +L RGL P+V+TY 
Sbjct: 638 CTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYW 697

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            ++  L +   +     +F  +E+NG   +  + N L+  L+++  +  A
Sbjct: 698 LMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKA 747



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 208/429 (48%), Gaps = 22/429 (5%)

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG-PK--PNVVTF 251
            +A H   +++ R    +IV  N+ L     +     A SLF  +++V  PK  PN++T+
Sbjct: 36  HHAHHAFDELLHRPTTSSIVDLNRALSDAARHSP-AVAISLFRRMVMVARPKVPPNLITY 94

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S +I+   +   L+ AF     ++      + I +S L+  L    R  E  ++ L  + 
Sbjct: 95  SVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMP 154

Query: 312 -RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM--------LNGGFLPNVISYSILIKG 362
             G   +V  ++ ++    G+ D  R+ Q    +          GG+ P+V+SY+ +I G
Sbjct: 155 VLGCTPNVFSYTILLK---GLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVING 211

Query: 363 LCQQGRLVE-ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           L ++GR ++ A  LF Q+L + L P ++TY+S+I    K+  +     +   M+K G  P
Sbjct: 212 LLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMP 271

Query: 422 DAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           + +  + L++G        DA+  F +  R  + P++F +NTLM   C+  R+ +  K+F
Sbjct: 272 NRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIF 331

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M     KP+  T+  L+ G A++GSL     L   M++ G+ PD   ++ +I    K 
Sbjct: 332 DSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKH 391

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +   + +F  M R G+ PD   Y ++++ L     +D A+  FG+L   GL PD + +
Sbjct: 392 GKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVF 451

Query: 597 NTIICGYCS 605
             +I G C+
Sbjct: 452 RNLIHGLCA 460


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 246/525 (46%), Gaps = 45/525 (8%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL--CRAMRGKGFCVYE- 182
           GK+ E   +   M  MG+ L+      L+  L  +  V +      C  +RG  F V   
Sbjct: 24  GKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIAC 83

Query: 183 -FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             L++GL + G I+ A ++   + Q   VPN +T + ++   C  G I  A S    +  
Sbjct: 84  TVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEE 143

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG---- 297
               PNV+T+S+LIN + K+  L  AF++   M+  + +P++  Y+IL+DG FKAG    
Sbjct: 144 KDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDI 203

Query: 298 -------------------------------RLKEGNELLLTALDRGLKLDVVVFSSVMD 326
                                          R++E  EL+      GLK D+V ++++MD
Sbjct: 204 ALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMD 263

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            ++  G V  A+     M +   + +++++++LI  L + G+  +   ++  +    L P
Sbjct: 264 GFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSP 322

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
            L TY+++++G  K G       L++ M  R L P+A+ C+++INGL     M +A+   
Sbjct: 323 DLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDIL 382

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + V M L P    +  L++   + +RA   ++   L+    +K D   + +LI  +   
Sbjct: 383 KEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKL 442

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A  +   M +RG+  D  TY+A+IHG     ++      +  M    V+PDI  Y
Sbjct: 443 GMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETY 502

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           N+LL  L K   +  A  L  ++  RGL P+  TY T++CG+C +
Sbjct: 503 NLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKV 547



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 251/522 (48%), Gaps = 18/522 (3%)

Query: 98  YNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           Y F  L++ +L      YS LI++  ++G I+ +      M +     +      L++  
Sbjct: 101 YLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGY 160

Query: 158 VDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
           V    +   +K+ R M  K      C Y  L++G  + G  + A  ++ ++ Q G   N+
Sbjct: 161 VKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNV 220

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
              +  +  +  +G++  A  L   +   G KP++V ++ L++ F K  K+  A  L   
Sbjct: 221 FILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQE 280

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIG 332
           M   ++V D++ +++LI+ LFK G  K   E + +A+ + GL  D+  ++++++     G
Sbjct: 281 MTSKNVVFDIVTFNVLINCLFKLG--KSDTESIYSAMREMGLSPDLATYNTMLNGNFKKG 338

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           +   A++ ++ M +   +PN I+ +I+I GLC+ GR+  A  +  ++++  L P+  TY 
Sbjct: 339 NWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYR 398

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRM 447
            L++   KS +       ++ ++   LK D  V ++LI+     G+   A          
Sbjct: 399 ILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEER 458

Query: 448 TLIPNLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            +I +   +N L+ G C    LKRA  T   +  M    + PD+ T+ +L+ G++  G +
Sbjct: 459 GIIADTTTYNALIHGYCISSHLKRAFMT---YSTMLSERVSPDIETYNLLLGGLSKAGLI 515

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  L  ++ KRGL P+  TY  ++ G  K +N    L ++  M   G  P    YN+L
Sbjct: 516 HEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNML 575

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +    K   +  A +L  ++  +G+ P   TY+ +ICG+C+L
Sbjct: 576 IGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNL 617



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 201/403 (49%), Gaps = 33/403 (8%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           ++  G  P++VT   IL  LC +G++     L   +  +G   N V+++ L++A  K  K
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           + +A      M+      D+I  ++LIDGLFK+G++KE   L        L  + + +S+
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D+   +GD+  A      M     +PNVI+YS LI G  +QG L +A  +  +++ + 
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQ 443
             P++ TY+ L+DG  K+G       LY  M + GLK                       
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLK----------------------- 217

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                   N+FI +  ++   R  R  +  +L   M    +KPD++ +T L+ G    G 
Sbjct: 218 -------DNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGK 270

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYN 562
           +SSA+ L  +M  + +  D++T++ +I+ LFK GK+ +  +  +  M   G++PD+A YN
Sbjct: 271 VSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESI--YSAMREMGLSPDLATYN 328

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            +LN   K+ N  +AL+L+ ++  R L P+ IT N +I G C 
Sbjct: 329 TMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCE 371



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/513 (24%), Positives = 211/513 (41%), Gaps = 75/513 (14%)

Query: 65  PNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           PNI   A L+    ++  +D+A  ++ KM  Q G   N F L               + N
Sbjct: 183 PNICTYAILLDGSFKAGWQDIALDLYSKMK-QGGLKDNVFIL------------DAFVNN 229

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG-- 177
             R G+++E+ E+ A M+  G  L PDLV    LM   + S  V     L + M  K   
Sbjct: 230 MKRSGRMEEAEELVAKMASGG--LKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 287

Query: 178 ------------------------------------FCVYEFLMNGLLRKGVIENAFHMH 201
                                                  Y  ++NG  +KG   +A  + 
Sbjct: 288 FDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELW 347

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            ++  R  +PN +TCN ++  LC  G++ NA  +   ++L+G  P   T+  L+N   K 
Sbjct: 348 NEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKS 407

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            + +   Q + L++ M L  D  +Y+ILI  L K G  ++   +L    +RG+  D   +
Sbjct: 408 RRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTY 467

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++  Y     + RA  TY  ML+    P++ +Y++L+ GL + G + EA  L  ++  
Sbjct: 468 NALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKK 527

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGD 436
           R L P+  TY +L+ G CK    ++   +Y  M+ +G  P     ++LI      G M  
Sbjct: 528 RGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQ 587

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD------------TVKLFMLMGMYNI 484
           A     +     + P    ++ L+ G C L +  D              +LF+ M     
Sbjct: 588 AKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGF 647

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            P   T   +    A+ G  + A +L     KR
Sbjct: 648 VPCESTQACISSTFAAPGKKADARMLLKSTYKR 680


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 216/442 (48%), Gaps = 40/442 (9%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +++ G  P++ T   IL  LC  G +  A  LFD +  +G  PN   ++TL++ + K  +
Sbjct: 308 MVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKARE 367

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK---------------------------- 295
           + +A  LY  M    + PD + ++IL+ G +K                            
Sbjct: 368 VAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDV 427

Query: 296 -------AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
                  AGRL E  +LL   L++GL L VV F+S++ AY   G   +A + Y  M+  G
Sbjct: 428 MVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCG 487

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F P+  + + L+ GLC++G L EA  L  ++L +    + + Y+ L+DG+ K   L    
Sbjct: 488 FTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQ 547

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M +RG+ PDAV  + LI+GL     + +A   F +   +  +PN F +N+L+ G 
Sbjct: 548 FLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGL 607

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C   R T+ +KL   M    +  D  T  ++I G   +G +  AI  F  M + GL PD+
Sbjct: 608 CDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDI 667

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            T++ +I G  K  ++     +   M   G+ PDI  YN  ++   +   ++ A+ +  Q
Sbjct: 668 FTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQ 727

Query: 584 LTDRGLEPDIITYNTIICGYCS 605
           L   G+ PD +TYNT++ G CS
Sbjct: 728 LISAGIVPDTVTYNTMLSGICS 749



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 237/499 (47%), Gaps = 10/499 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ ++    R G + E+ ++F  + DMGI  +  +   LM     +  V Q   L   MR
Sbjct: 320 FTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMR 379

Query: 175 GKGF---CV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G    CV +  L+ G  + G IE++  + + +I  G   +    + ++  LC  G++ 
Sbjct: 380 TTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLD 439

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   LL  G   +VV F++LI A+ +    +KAF+ Y +M+     P     + L+
Sbjct: 440 EAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLL 499

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL + G L+E   LL   L++G  ++ V ++ ++D Y  + ++  A   +  M   G  
Sbjct: 500 MGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIY 559

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ ++++ LI GL + G + EA  +F ++      P+   Y+SLI G C  G++ +   L
Sbjct: 560 PDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKL 619

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M ++GL  D    +++I+G      M  A+  F    R+ L+P++F FN L+ G C+
Sbjct: 620 EKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCK 679

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                   ++   M    + PD+ T+   + G      ++ A+++  Q++  G+ PD +T
Sbjct: 680 AFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVT 739

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ ++ G+         +   KL+ + G  P++   N+LL+   K+   + AL    +L 
Sbjct: 740 YNTMLSGICSDILDRAMILTAKLL-KMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLR 798

Query: 586 DRGLEPDIITYNTIICGYC 604
           +     D I+Y  +   YC
Sbjct: 799 EISFGFDEISYRILDQAYC 817


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 207/402 (51%), Gaps = 5/402 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  PN  T    L  LC   Q+ +A +   +L   G   N   F+ +I+ FC + ++ K
Sbjct: 242 EGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHK 301

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A ++++ M +   VPD+  YSIL+DGL K G +  G  +L+     G+  ++V +SS++ 
Sbjct: 302 AIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLH 361

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G V  A + + R+ + GF  + I YSI++ G CQ   L     L+  ++     P
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVP 421

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFF 441
               YSSLI  +C+  +L++   +++ M+  G+ P+ V C++L++     GL+G+A  F 
Sbjct: 422 DAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFL 481

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +  +  ++P+L  +  ++ G C++ +  D   +F  M      PD + ++++I G    
Sbjct: 482 DKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKA 541

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
             L  A  L+++M+  G  P++ TY+++I+GL     +   + +FK M   G+APD  +Y
Sbjct: 542 LDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILY 601

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             L+    K  N+ AAL++F ++   GL  D   Y  +I G+
Sbjct: 602 TSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGF 643



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 221/467 (47%), Gaps = 44/467 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  ++   +   + E+A   + +  + G    +  CN +LKRL    QI  A SLFD +
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKVGV--ELQVCNFLLKRLVEGNQIMYARSLFDDM 202

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM--DLVPDLIIYSILIDGLFKAG 297
              GP PNV ++S L++ +   AKL     L  L       + P+   Y+  + GL  A 
Sbjct: 203 KSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAK 262

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           ++K     L     RG   +   F++V+  +   G V +A++ +D M   GF+P+V SYS
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYS 322

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           IL+ GLC+QG ++    +  ++    + P+L++YSSL+ G C++G++   F L+  +  +
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQ 382

Query: 418 GLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G K D +V S++++G             +   V    +P+ + +++L+   CR ++  + 
Sbjct: 383 GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEA 442

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL----------------------- 509
           +++F LM    I P+V+T T+L+ G +++G +  A L                       
Sbjct: 443 LEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHG 502

Query: 510 ------------LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
                       +F  M+KRG  PD + YS II G  K  ++     ++  M   G  P+
Sbjct: 503 LCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPN 562

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           I  Y  L+N L  +  L   + LF  +   GL PD I Y ++I  YC
Sbjct: 563 IFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYC 609



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 205/413 (49%), Gaps = 12/413 (2%)

Query: 164 GQYYKLCRAMRGKGFC-------VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
           GQ +K      G   C        Y  L++GL ++G +   ++M  ++ + G  PN+V+ 
Sbjct: 297 GQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSY 356

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           + +L  LC  G++  A  LF  L   G K + + +S +++  C+   LE  + L+N M+ 
Sbjct: 357 SSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVH 416

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
            + VPD   YS LI    +  +LKE  E+    +  G+  +VV  + ++  +   G +G 
Sbjct: 417 HNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGE 476

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A    D++   G +P++ +Y ++I GLC+  +  +  G+F  ++ R   P  + YS +ID
Sbjct: 477 AFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIID 536

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIP 451
           GF K+  L++ F LY  M+  G KP+    + LINGL  D      +  F   +   L P
Sbjct: 537 GFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAP 596

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +  ++ +L+   C+       +++F  M    +  D   +T LI G +   ++  A L  
Sbjct: 597 DRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFM 656

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
            +M+ +GLTP V+TY+ +I G FK  +    + M+  M + G+APD  +  +L
Sbjct: 657 EEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDAKLSCIL 709



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 179/410 (43%), Gaps = 63/410 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS L+    R G+++ + E+F  + D G                                
Sbjct: 356 YSSLLHGLCRAGRVELAFELFKRLKDQGF------------------------------- 384

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                VY  +++G  +   +E  + +   ++   FVP+    + ++   C + Q+  A  
Sbjct: 385 KHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALE 444

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F++++  G  PNVVT + L++ F  E  + +AF   + + +  +VP L  Y ++I GL 
Sbjct: 445 VFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLC 504

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  +  +   +    + RG   D V++S ++D +V   D+  A + Y +M++ G  PN+ 
Sbjct: 505 KVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIF 564

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI GLC   +L E   LF  ++   L P  + Y+SLI  +CK   ++    ++  M
Sbjct: 565 TYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREM 624

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
              GL  D+ V + LI G                       F+ ++        A D  +
Sbjct: 625 ETEGLSADSFVYTCLIGG-----------------------FSKVL--------AMDGAQ 653

Query: 475 LFMLMGM-YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           LFM   M   + P V+T+T LI G    G    A+ ++  ML+ G+ PD 
Sbjct: 654 LFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDA 703



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 188/420 (44%), Gaps = 22/420 (5%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNAS-SLFDVLLLVGPK-------PNVVTFSTLI 255
           ++ R F+P  +   + L +  ++   GNA   LF+++ ++          P V  ++T+I
Sbjct: 94  LLMRSFLPRRIRDVRCLIQSVVD-HCGNAGPELFELVPMLASNLGGSMTLPQV--YATVI 150

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
             F + +  E A   Y    ++ +  +L + + L+  L +  ++     L       G  
Sbjct: 151 RVFVELSMFEDALVTYVEAKKVGV--ELQVCNFLLKRLVEGNQIMYARSLFDDMKSSGPS 208

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG--GFLPNVISYSILIKGLCQQGRLVEAC 373
            +V  +S +M  Y     +               G  PN  +Y+  + GLC   + V++ 
Sbjct: 209 PNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCH-AKQVKSA 267

Query: 374 GLFGQVLIRRLEP-SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             F Q+L +R  P +   ++++I GFC  G++     ++D M K G  PD    S+L++G
Sbjct: 268 WNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDG 327

Query: 433 L--MGDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           L   GD L  ++  V M    + PNL  +++L+ G CR  R     +LF  +     K D
Sbjct: 328 LCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHD 387

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            I +++++ G      L     L+  M+     PD   YS++I+   + + +   L +F+
Sbjct: 388 HIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFE 447

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           LM  +G+ P++    +L++    E  +  A     ++   G+ P + TY  II G C +N
Sbjct: 448 LMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVN 507



 Score = 43.1 bits (100), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 20/99 (20%), Positives = 48/99 (48%), Gaps = 1/99 (1%)

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G+ P+  TY+  ++GL   K +    +  +++ + G   +   +N +++    +  +  
Sbjct: 242 EGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHK 301

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
           A+++F  +   G  PD+ +Y+ ++ G C     L  GY+
Sbjct: 302 AIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLT-GYY 339


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 248/523 (47%), Gaps = 25/523 (4%)

Query: 101 FRLFRDSLGDF----GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
            RLF++ L          Y+ LI  + + G++ ++V +F+ M   G+  +   +  L+  
Sbjct: 17  LRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLG 76

Query: 157 LVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           L +   +    KL R M+   F      +  L+ G    G + +A    + + +      
Sbjct: 77  LCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVA 136

Query: 213 IVTCNKILKRLCINGQIGN----ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             T N +LK LC   +  N    A   F  +   G +P++ ++  L++A     ++ +A 
Sbjct: 137 TGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAH 196

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            L++    M   PD++ Y++L+DG  K G+  E   L+   L  G + +V  +S +++ Y
Sbjct: 197 ALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCY 253

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             +  V  A + + +M+    +PN ++++ LI G C+ G L +A  LF ++     + ++
Sbjct: 254 CKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATI 313

Query: 389 LTYSSLIDGFCKS-GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRF-----FF 442
           +TY++LID  CK  G +     L++ +   GL P  V  + LI G   DA R      +F
Sbjct: 314 VTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFC-DARRLSEAMQYF 372

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             +     PN+  ++ L+DG C+++R  +  K    M  +   P V+T+  LI G    G
Sbjct: 373 DEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCG 432

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L SA+L F +M   G  P+ + ++ +I GL K +  + GL +   M   G  PD+  YN
Sbjct: 433 ELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYN 492

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            L++ L     ++ A +LF  +      P++ T+N +I G C+
Sbjct: 493 CLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCA 532



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 156/552 (28%), Positives = 263/552 (47%), Gaps = 62/552 (11%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASH----VFDKM- 90
           NA+L+ L+       A++ FK     + +PN A   +VL++   +    H    VF  M 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPN-AHTYNVLIRGFCKGGQMHQAVSVFSDMK 59

Query: 91  -----------------VIQFGKTYNFFRLFRD-SLGDF---GCDYSFLIENYVRIGKID 129
                            + + G+  +  +LFR+   G F      ++ L+  +   G++ 
Sbjct: 60  SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 130 ESVEIFAYMSDM---------GIYLSPDLVQRLMSCLVD--SNSVGQYYKLCRAMRGKG- 177
           +++   A++ DM         G Y   +LV + + C  +  +N + Q  +  + M+  G 
Sbjct: 120 DAL---AHLQDMRKSSSSVATGTY---NLVLKGL-CWENKSANRLEQAMEFFKEMKASGV 172

Query: 178 ---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++ L   G +  A   H         P+I+T N ++   C  GQ   A S
Sbjct: 173 EPDLESYHILLSALSDSGRMAEA---HALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQS 229

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   +L  G +PNV T+S +IN +CK  K+E+A++++  M+E + VP+ + ++ LI G  
Sbjct: 230 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 289

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI-GDVGRAVQTYDRMLNGGFLPNV 353
           KAG L++  +L       G K  +V +++++D+     G V  AV  ++++   G  P +
Sbjct: 290 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTI 349

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ LI+G C   RL EA   F + +  +  P+++TYS LIDG CK  ++++     ++
Sbjct: 350 VTYNSLIQGFCDARRLSEAMQYFDE-MEGKCAPNVITYSILIDGLCKVRRMKEAAKTLED 408

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M   G  P  V    LING      +  AL FF +       PN  IFNTL+DG C+ +R
Sbjct: 409 MKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAER 468

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
           A D ++L   M     KPDVIT+  LI G+ S   +  A  LF  M      P+V T++ 
Sbjct: 469 ANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNF 525

Query: 529 IIHGLFKGKNIS 540
           +I GL   K + 
Sbjct: 526 LIRGLCAQKKVE 537



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 211/431 (48%), Gaps = 14/431 (3%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++GL+     + A  + ++V+   F PN  T N +++  C  GQ+  A S+F  +   G
Sbjct: 3   LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN  T +TL+   C+  ++  A +L+  M     +P    ++IL+ G F AGR+++  
Sbjct: 63  LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYV----GIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
             L         +    ++ V+            + +A++ +  M   G  P++ SY IL
Sbjct: 123 AHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHIL 182

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  L   GR+ EA  LF  +      P ++TY+ L+DG+CK G+  +  SL   ++K G 
Sbjct: 183 LSALSDSGRMAEAHALFSAMTC---SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 239

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +P+    S++IN       + +A   F + +    +PN   FNTL+ G C+     D +K
Sbjct: 240 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 299

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQ-GSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           LF  M     K  ++T+  LI  +  + G + +A+ LF ++   GLTP ++TY+++I G 
Sbjct: 300 LFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF 359

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
              + +S  +  F  ME    AP++  Y++L++ L K   +  A K    +   G  P +
Sbjct: 360 CDARRLSEAMQYFDEME-GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTV 418

Query: 594 ITYNTIICGYC 604
           +TY  +I G+C
Sbjct: 419 VTYGGLINGFC 429



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 190/390 (48%), Gaps = 15/390 (3%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMR-GKGFCVYEF 183
           ++++++E F  M   G+   PDL     L+S L DS  + + + L  AM        Y  
Sbjct: 156 RLEQAMEFFKEMKASGV--EPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNV 213

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM+G  + G    A  + +++++ G+ PN+ T + I+   C   ++  A  +F  ++   
Sbjct: 214 LMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN 273

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA-GRLKEG 302
             PN VTF+TLI  FCK   LE A +L+  M ++     ++ Y+ LID L K  G +   
Sbjct: 274 CVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 333

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            +L       GL   +V ++S++  +     +  A+Q +D M  G   PNVI+YSILI G
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDG 392

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC+  R+ EA      +      P+++TY  LI+GFCK G+L+     ++ M   G  P+
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPN 452

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V+ + LI+GL       D LR           P++  +N L+ G C   R  D  +LF 
Sbjct: 453 TVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD 512

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            M      P+V T   LIRG+ +Q  +  A
Sbjct: 513 GMA---CAPNVTTFNFLIRGLCAQKKVEEA 539



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 172/363 (47%), Gaps = 13/363 (3%)

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + L++      K ++A +L+  ++     P+   Y++LI G  K G++ +   +      
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            GL  +    ++++     IG +  A++ +  M  G FLP   S++IL++G    GR+ +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFC----KSGKLRDGFSLYDNMIKRGLKPD----- 422
           A      +       +  TY+ ++ G C     + +L      +  M   G++PD     
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 423 AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            ++ +L  +G M +A   F     MT  P++  +N LMDG C++ +  +   L   +   
Sbjct: 181 ILLSALSDSGRMAEAHALF---SAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
             +P+V T++++I        +  A  +F +M++    P+ +T++ +I G  K   +   
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKE-CNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
           + +F  ME+ G    I  YN L++ L K+   +  A+ LF +L   GL P I+TYN++I 
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 602 GYC 604
           G+C
Sbjct: 358 GFC 360



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 9/263 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-----NSVGQYYKL 169
           ++ LI  + + G +++++++FA M  +G   +      L+  L         +V  + KL
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 340

Query: 170 CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             A        Y  L+ G      +  A     + ++    PN++T + ++  LC   ++
Sbjct: 341 EGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDE-MEGKCAPNVITYSILIDGLCKVRRM 399

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A+   + +   G  P VVT+  LIN FCK  +L+ A   +  M      P+ +I++ L
Sbjct: 400 KEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTL 459

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDGL KA R  +G  LL      G K DV+ ++ ++        V  A + +D M     
Sbjct: 460 IDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---AC 516

Query: 350 LPNVISYSILIKGLCQQGRLVEA 372
            PNV +++ LI+GLC Q ++ EA
Sbjct: 517 APNVTTFNFLIRGLCAQKKVEEA 539



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 39/80 (48%)

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           +A++ GL   +     L +FK +     AP+   YNVL+    K   +  A+ +F  +  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 587 RGLEPDIITYNTIICGYCSL 606
            GL P+  T NT++ G C +
Sbjct: 61  SGLLPNASTMNTLLLGLCEI 80


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 274/580 (47%), Gaps = 51/580 (8%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGK-----TYNFF------------------RLFRD 106
           LI    + ++ D A  V D M  +FG      TYNF                   R+   
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSR 205

Query: 107 SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPD--LVQRLMSCLVDSNSV 163
            +      ++ LI+   R  +I  ++     M +MG Y LSPD      LM   ++  ++
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAI---LMMEEMGSYGLSPDEKTFTTLMQGFIEEGNM 262

Query: 164 GQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
               ++   M   G          L++G  ++G IE       ++   GF P+  T N +
Sbjct: 263 NGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSL 322

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  LC  G + +A  + DV+L  G  P++ T+++LI   CK  ++E+A ++ N M+  D 
Sbjct: 323 VNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDF 382

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            P+ + Y+ LI  L K  +++E  EL      +G+  DV  F+S++       +   A++
Sbjct: 383 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAME 442

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            ++ M   G  P+  +Y++LI  LC +GRL EA  L  ++       +++TY++LIDGFC
Sbjct: 443 LFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFC 502

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLF 454
           K+ ++ +   ++D M  +G+  + V  + LI+GL     + +A +   Q +   L P+ F
Sbjct: 503 KNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKF 562

Query: 455 IFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
            +N+L+   CR   +K+A D V+     G    +PD +T+  LI G++  G +  A  L 
Sbjct: 563 TYNSLLTYFCRAGDIKKAADIVQTMTSNG---CEPDSVTYGTLILGLSKAGRVELASRLL 619

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             +  +G+     TY+ +I  LF+ K  S  + +F+ M   G  PD   Y V+   L   
Sbjct: 620 RTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGL--- 676

Query: 572 CN----LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           C+    +  A+    ++TD+G  PD  ++  +  G C+L+
Sbjct: 677 CSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALS 716



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 140/575 (24%), Positives = 259/575 (45%), Gaps = 52/575 (9%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFR--DSLGDFGCD-----YSFLIENYVRIGKIDESVEIF 135
           +S ++++++ + GK  +F  + R    +   GC+     +  LIE+Y +    DE+V + 
Sbjct: 104 SSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVV 163

Query: 136 AYM-SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLR 190
             M  + G+ L       L++ LVD N +     +   M  +G       +  L+  L R
Sbjct: 164 DIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCR 223

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
              I  A  M  ++   G  P+  T   +++     G +  A  + + ++  G   + VT
Sbjct: 224 AHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVT 283

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
            + L++ +CKE ++E+     + M      PD   ++ L++GL + G +K   E+L   L
Sbjct: 284 VNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVML 343

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
             G   D+  ++S++     +G+V  AV+  ++M+   F PN ++Y+ LI  LC++ ++ 
Sbjct: 344 QEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVE 403

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           EA  L   +  + + P + T++SLI G C +   R    L++ M  +G  PD    ++LI
Sbjct: 404 EATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLI 463

Query: 431 N-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           +     G + +AL    +        N+  +NTL+DG C+ KR  +  ++F  M +  I 
Sbjct: 464 DSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGIS 523

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
            +V+T+  LI G+     +  A  L  QML  GL PD  TY++++    +  +I     +
Sbjct: 524 RNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADI 583

Query: 546 FKLMERNGVAPD-----------------------------------IAIYNVLLNMLIK 570
            + M  NG  PD                                      YN ++  L +
Sbjct: 584 VQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFR 643

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           E     A++LF ++ ++G  PD +TY  +  G CS
Sbjct: 644 EKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCS 678



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 218/490 (44%), Gaps = 40/490 (8%)

Query: 105 RDSLGDFGCDYS-----FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           R+ +   GC  S      L+  Y + G+I+E +     MS+ G          L++ L  
Sbjct: 269 REQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCR 328

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
              V    ++   M  +GF      Y  L+ GL + G +E A  +  Q+I R F PN VT
Sbjct: 329 IGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVT 388

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N ++  LC   Q+  A+ L  VL   G  P+V TF++LI   C       A +L+  M 
Sbjct: 389 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK 448

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
                PD   Y++LID L   GRL+E   LL      G   +VV +++++D +     + 
Sbjct: 449 TKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIE 508

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A + +D M   G   NV++Y+ LI GLC+  R+ EA  L  Q+L+  L+P   TY+SL+
Sbjct: 509 EAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLL 568

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
             FC++G ++    +   M   G +PD+V    LI GL                      
Sbjct: 569 TYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGL---------------------- 606

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
                    R++ A+  ++   L GM  + P   T+  +I+ +  +   S A+ LF +M+
Sbjct: 607 -----SKAGRVELASRLLRTVQLKGMV-LAPQ--TYNPVIKALFREKRTSEAVRLFREMM 658

Query: 516 KRGLTPDVITYSAIIHGLFKGKN-ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           ++G  PD +TY  +  GL  G   I   +     M   G  PD + + +L   L      
Sbjct: 659 EKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSME 718

Query: 575 DAALKLFGQL 584
           D  +KL  ++
Sbjct: 719 DTLIKLVNRV 728



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 201/405 (49%), Gaps = 6/405 (1%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           Q  FVP+ V   ++L++L  +G  G+   +   +   G +    TF  LI ++ K    +
Sbjct: 98  QPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFD 157

Query: 266 KAFQLYNLMME-MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           +A  + ++M E   L  D   Y+ L++ L    +LK    +    + RG+K DV  F+ +
Sbjct: 158 EAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNIL 217

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           + A      +  A+   + M + G  P+  +++ L++G  ++G +  A  +  Q++    
Sbjct: 218 IKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGC 277

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
             S +T + L+ G+CK G++ +  S  D M   G +PD    + L+NGL     +  AL 
Sbjct: 278 PSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALE 337

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                ++    P++F +N+L+ G C+L    + V++   M + +  P+ +T+  LI  + 
Sbjct: 338 ILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLC 397

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +  +  A  L   +  +G+ PDV T++++I GL    N  + + +F+ M+  G  PD  
Sbjct: 398 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEF 457

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            YN+L++ L     L+ AL L  ++   G   +++TYNT+I G+C
Sbjct: 458 TYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFC 502



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 163/370 (44%), Gaps = 7/370 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM-DLVPDLIIYSILIDGLFKAGRLKEGNE 304
           P   T   L +A  +++  +    L +   +  + VP  +IY  ++  L K G       
Sbjct: 67  PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-GFLPNVISYSILIKGL 363
           +L      G ++    F  ++++Y        AV   D M    G   +  +Y+ L+  L
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
               +L     +  +++ R ++P + T++ LI   C++ ++R    + + M   GL PD 
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              + L+ G      M  ALR   Q V      +    N L+ G C+  R  + +     
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M     +PD  T   L+ G+   G +  A+ +   ML+ G  PD+ TY+++I GL K   
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   + +   M     +P+   YN L++ L KE  ++ A +L   LT +G+ PD+ T+N+
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426

Query: 599 IICGYCSLNS 608
           +I G C  N+
Sbjct: 427 LIQGLCLTNN 436


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 213/403 (52%), Gaps = 5/403 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G  P+++T N ++   C  GQI    S+   +L  G  P+ VT +TLI   C + +++K
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A   ++ ++      + + Y+ LI+G+ K G  +   + L     R  K DVV++++++D
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIID 207

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A      V  A   +  M   G   +V++Y+ LI G C  G+L EA GL  +++++ + P
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           ++ TY+ L+D  CK GK+++  S+   M+K  +KPD +  S L++G      +  A   F
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
                M + P++  +  L++G C+ K   + + LF  M   N+ P ++T++ LI G+   
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +S    L  +M  RG   DVITYS++I GL K  ++   + +F  M+   + P+I  +
Sbjct: 388 GRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +LL+ L K   L  A ++F  L  +G   ++ TYN +I G+C
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 252/489 (51%), Gaps = 17/489 (3%)

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK----LCRAMRGKG--- 177
           I  +D++V  F  M  + +  +P ++Q   + ++DS +  ++Y     L   +  KG   
Sbjct: 37  IQNVDDAVSQFNRM--LCMRHTPPIIQ--FNKILDSFAKMKHYSTAVSLSHRLELKGIQP 92

Query: 178 -FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
                  L+N     G I   F +  ++++RG+ P+ VT N ++K LC+ GQ+  A    
Sbjct: 93  DLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFH 152

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           D LL  G + N V+++TLIN  CK      A +    +      PD+++Y+ +ID + K 
Sbjct: 153 DKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKY 212

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
             + E   L      +G+  DVV +++++  +  +G +  A+   + M+     PNV +Y
Sbjct: 213 QLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           +IL+  LC++G++ EA  +   +L   ++P ++TYS+L+DG+    +++    +++ M  
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 417 RGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G+ PD    ++LING     ++ +AL  F +  +  ++P +  +++L+DG C+  R + 
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              L   M       DVIT++ LI G+   G L  AI LF +M  + + P++ T++ ++ 
Sbjct: 393 VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL KG  +     +F+ +   G   ++  YNV++N   K+  L+ AL +  ++ D G  P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIP 512

Query: 592 DIITYNTII 600
           +  T+ TII
Sbjct: 513 NAFTFETII 521



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 216/431 (50%), Gaps = 13/431 (3%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAM 173
           + LI  +  +G+I     + A +   G    PD V    L+  L     V +       +
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRG--YPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 174 RGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +GF +    Y  L+NG+ + G    A    R++  R   P++V  N I+  +C    +
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLV 215

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  LF  + + G   +VVT++TLI  FC   KL++A  L N M+   + P++  Y+IL
Sbjct: 216 SEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           +D L K G++KE   +L   L   +K DV+ +S++MD Y  + +V +A   ++ M   G 
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V +Y+ILI G C+   + EA  LF ++  + + P ++TYSSLIDG CKSG++   + 
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWD 395

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L D M  RG   D +  S LI+GL     +  A+  F +     + PN+F F  L+DG C
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLC 455

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  R  D  ++F  +       +V T+ V+I G   QG L  A+ +  +M   G  P+  
Sbjct: 456 KGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAF 515

Query: 525 TYSAIIHGLFK 535
           T+  II  LFK
Sbjct: 516 TFETIIIALFK 526



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 196/381 (51%), Gaps = 5/381 (1%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A S F+ +L +   P ++ F+ ++++F K      A  L + +    + PDLI  +I
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+     G++  G  +L   L RG   D V  ++++      G V +A+  +D++L  G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F  N +SY+ LI G+C+ G    A     ++  R  +P ++ Y+++ID  CK   + + +
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M  +G+  D V  + LI G      + +A+    + V  T+ PN++ +N L+D  
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +  +   +  +M    +KPDVIT++ L+ G      +  A  +F  M   G+TPDV
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ +I+G  K K +   L++FK M +  + P I  Y+ L++ L K   +     L  +
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDE 399

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           + DRG   D+ITY+++I G C
Sbjct: 400 MRDRGQPADVITYSSLIDGLC 420



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 145/278 (52%), Gaps = 12/278 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN----SVGQYYKLC 170
           Y+ L++   + GK+ E+  + A M  +   + PD++    S L+D       V +   + 
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVM--LKACVKPDVIT--YSTLMDGYFLVYEVKKAQHVF 327

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            AM   G       Y  L+NG  +  +++ A ++ +++ Q+  VP IVT + ++  LC +
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+I     L D +   G   +V+T+S+LI+  CK   L++A  L+N M + ++ P++  +
Sbjct: 388 GRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +IL+DGL K GRLK+  E+    L +G  L+V  ++ +++ +   G +  A+    +M +
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
            G +PN  ++  +I  L ++    +A  L  Q++ R L
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 170/398 (42%), Gaps = 22/398 (5%)

Query: 31  QFNQAN-AILAN-LIKTNNPTPAIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASH 85
           Q NQ + A L N + K  +   AI+F +     ++ P++     +I  + +  +   A  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 86  VFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           +F +M ++              +      Y+ LI  +  +GK+ E++ +   M    I  
Sbjct: 221 LFSEMAVK-------------GISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267

Query: 146 SPDLVQRLMSCLVDSNSVGQYYK----LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMH 201
           +      L+  L     V +       + +A        Y  LM+G      ++ A H+ 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
             +   G  P++ T   ++   C N  +  A +LF  +      P +VT+S+LI+  CK 
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            ++   + L + M +     D+I YS LIDGL K G L     L     D+ ++ ++  F
Sbjct: 388 GRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           + ++D     G +  A + +  +L  G+  NV +Y+++I G C+QG L EA  +  ++  
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
               P+  T+ ++I    K  +      L   MI RGL
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 116/240 (48%), Gaps = 4/240 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS L++ Y  + ++ ++  +F  MS MG+         L++    +  V +   L + M 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 175 GK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K    G   Y  L++GL + G I   + +  ++  RG   +++T + ++  LC NG + 
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +LF+ +     +PN+ TF+ L++  CK  +L+ A +++  ++      ++  Y+++I
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G  K G L+E   +L    D G   +   F +++ A     +  +A +   +M+  G L
Sbjct: 487 NGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 54/115 (46%)

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           +H+       S  ++  A+  F +ML    TP +I ++ I+    K K+ S  + +   +
Sbjct: 26  SHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL 85

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           E  G+ PD+   N+L+N       +     +  ++  RG  PD +T NT+I G C
Sbjct: 86  ELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLC 140



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 63/141 (44%)

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           ++   D V  F  M      P +I    ++   A     S+A+ L  ++  +G+ PD+IT
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            + +I+       I+ G  +   + + G  PD    N L+  L  +  +  AL    +L 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 586 DRGLEPDIITYNTIICGYCSL 606
            +G + + ++Y T+I G C +
Sbjct: 157 AQGFQLNQVSYATLINGVCKI 177


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 244/526 (46%), Gaps = 16/526 (3%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           D + + G D     Y+  I  Y R   ++E+ +++  M   G+ L    +  L++ L   
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 161 NSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
               + Y L R M   G       Y  L++ L + G  +    +  +++ RG V ++VT 
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
             ++  L   G+           L     PN VT++ LI+A CK   +++A Q+   M E
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             + P+++ +S +I+G  K G L +  E      +RG+  +VV + +++D +        
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A++ Y  ML  G   N      L+ GL Q G++ EA  LF       L    + Y++LID
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIP 451
           G  K+G +   F     ++ R + PDAVV ++ IN     G   +A  F  +   M L P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +   +NT++   CR       +KL   M M +IKP++IT+  L+ G+   G++  A  L 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M+  G +P  +T+  ++    + + + V L + + M   G+  DI +YN LL +L   
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
                A  +  ++   G+ PD IT+N +I G+C   S  +D  F +
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHC--KSSHLDNAFAT 751



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 238/512 (46%), Gaps = 13/512 (2%)

Query: 106 DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSV 163
           D+L   G  Y+ LI+   +   +DE+ ++   M +  I  SP++V    +++  V    +
Sbjct: 373 DNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI--SPNVVTFSSVINGFVKRGLL 430

Query: 164 GQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            +  +  R M+ +G       Y  L++G  +    + A  ++  ++  G   N    + +
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  L  NG+I  A +LF      G   + V ++TLI+   K   +  AF+    +M+ ++
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +PD ++Y++ I+ L   G+ KE    L    + GLK D   +++++ ++   G+  +A++
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
               M      PN+I+Y+ L+ GL   G + +A  L  +++     PS LT+  ++    
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLF 454
           +S +L     +++ M+  GL  D  V + L+     +G+   A     + +   + P+  
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            FN L+ G C+     +    +  M   NI P++ T   L+ G+ S G +  A  +  +M
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            K GL P+ +TY  +  G  K  N    + ++  M   G  P ++ YN L++   K   +
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             A +LF  +  RG+ P   TY+ ++ G+  L
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGWYDL 882



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 206/436 (47%), Gaps = 36/436 (8%)

Query: 199 HMHRQVI-----QRGFVPNIVTCNKILKRLCINGQIGNASSLFD----VLLLVGPKPNVV 249
           H H   +     +RG   + VT N +L  LC NGQ+  A++L D    +  L     +V+
Sbjct: 116 HAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-----DVI 170

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            ++TLI  +C+      A  + + M    L  D++ Y+ L+ G  +AG++     +L   
Sbjct: 171 GWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMM 230

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
            + G+  +V  ++  +  Y     V  A   Y+ M+  G L +V++ S L+ GLC+ GR 
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  LF ++      P+ +TY +LID   K+G+ ++  SL   M+ RG+  D V  + L
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 430 INGL--------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           ++ L        + D LRF        L PN   +  L+D  C+     +  ++ + M  
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSD---NLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
            +I P+V+T + +I G   +G L  A      M +RG+ P+V+TY  +I G FK +    
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L ++  M   GV  +  I + L+N L +   ++ A+ LF   +  GL  D + Y T   
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT--- 524

Query: 602 GYCSLNSCLIDGYFKS 617
                   LIDG FK+
Sbjct: 525 --------LIDGLFKA 532



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 148/359 (41%), Gaps = 71/359 (19%)

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P  + Y+IL+  L           +L     RG+  D V  ++++      G V  A   
Sbjct: 101 PTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 341 YDRMLNGGFLP-NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            DR   GG    +VI ++ LI G C+ G    A  +  ++  + L   ++ Y++L+ GFC
Sbjct: 158 ADR--GGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           ++G++     + D M + G+ P+                         T  P +  +   
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVA-----------------------TYTPFIVYY--- 249

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
               CR K   +   L+  M    +  DV+T + L+ G+   G  S A  LF +M K G 
Sbjct: 250 ----CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGA 305

Query: 520 TPDVITYSAIIHGLFK-----------GKNISVGLHM----------------------- 545
            P+ +TY  +I  L K           G+ +S G+ M                       
Sbjct: 306 APNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKD 365

Query: 546 -FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             +    + ++P+   Y VL++ L K  N+D A ++  ++ ++ + P+++T++++I G+
Sbjct: 366 TLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGF 424



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 4/219 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMN 186
           ++D  ++I  +M + G++    +   L+  L       +   +   M G G        N
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 187 GLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            L+    +   ++NAF  + Q++ +   PNI T N +L  L   G+IG A ++   +   
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G +PN +T+  L     K++   +A +LY  M+    VP +  Y+ LI    KAG + + 
Sbjct: 794 GLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
            EL      RG+      +  ++  +  +    ++  TY
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTY 892


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 251/519 (48%), Gaps = 45/519 (8%)

Query: 96  KTYNFFRLFRD--SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
           K Y   +  RD  S+      YS +I  + + G++D + EI   M      ++PD+V   
Sbjct: 27  KAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRD-GMAPDVV--- 82

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
                                      Y  +++GL R G ++ A  M R++  +G  P+ 
Sbjct: 83  --------------------------TYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDK 116

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T + ++   C   ++  A  L+  +L    + + V+ S LI   C+E ++ +A++L+  
Sbjct: 117 FTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQE 176

Query: 274 M-MEMD--LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           M M  D    PD++ Y+ LIDG  K+G L++  ++L     R    +VV +SS++     
Sbjct: 177 MEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCK 236

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            GD+ +A+  + RM + G +PNV++Y+ LI GLC   ++  A  L  ++         ++
Sbjct: 237 AGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVS 296

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVR 446
           Y++L+DG+C+ G++ +   L+  M  +   PD +  + L+ G       +  RF  ++++
Sbjct: 297 YNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 356

Query: 447 MT--LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
               + P++  ++ ++ G  R KR  +  +    M   N+ P+ +T++ LI G+   G +
Sbjct: 357 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 416

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           + A+    ++LK    PDV+TY+ +I GL         L + + M    V P +  +N +
Sbjct: 417 NHAM----EVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSV 472

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           +  L +  ++D A KL   +   GLEP ++TY T++ G+
Sbjct: 473 IGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGF 511



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 224/469 (47%), Gaps = 42/469 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQ-RGFVPNIVTCNKILKRLCINGQIGNASSLF-D 237
            Y  ++NGL +  +   A+ + +++   +   P++VT + ++   C  G++  A  +  +
Sbjct: 11  TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
           ++   G  P+VVT++++++  C++ K+++A ++   M    + PD   +S LI G   A 
Sbjct: 71  MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML---NGGFLPNVI 354
           ++ E  +L    L    +LD V  S+++        +G A + +  M    +G + P+V+
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI G C+ G L +A  + G +  R+  P+++TYSSL+ G CK+G L     L+  M
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 250

Query: 415 IKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRA 469
             +G  P+ V  + LI+GL      DA R     +  T  P +   +N L+DG CRL R 
Sbjct: 251 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRI 310

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-LKRGLTPDVITYSA 528
            +  +LF  M   +  PD IT+T L+RG  +   L  A  L   M    G+ PDV+TYS 
Sbjct: 311 EEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSI 370

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE----------------- 571
           ++ G  + K         + M    VAP+   Y+ L++ L K                  
Sbjct: 371 VVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPD 430

Query: 572 -----------CNLD---AALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
                      C  D    AL L  ++ ++ +EP + T+N++I   C L
Sbjct: 431 VVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRL 479



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 192/443 (43%), Gaps = 85/443 (19%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMME-MDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           PN  T++ ++N  CK     KA+++   M +   + PDL+ YS +I+G  K G +    E
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 305 LLLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP------------ 351
           +L   + R G+  DVV ++SV+D     G + RA +    M   G  P            
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 352 -----------------------NVISYSILIKGLCQQGRLVEACGLFGQVLIRR---LE 385
                                  + +S S LI GLC++ R+ EA  LF ++ +R     +
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 386 PSLLTYSSLIDGFCKSGKLR-----------------------------------DGFSL 410
           P ++TY++LIDGFCKSG L                                        L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIP-NLFIFNTLMDGCCR 465
           +  M  +G  P+ V  + LI+GL      DA R     +  T  P +   +N L+DG CR
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-LKRGLTPDVI 524
           L R  +  +LF  M   +  PD IT+T L+RG  +   L  A  L   M    G+ PDV+
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TYS ++ G  + K         + M    VAP+   Y+ L++ L K   ++ A+++   +
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV 426

Query: 585 TDRGLEPDIITYNTIICGYCSLN 607
                +PD++TY  +I G C  +
Sbjct: 427 D----KPDVVTYTIVIEGLCGTD 445



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 178/340 (52%), Gaps = 12/340 (3%)

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVVVFSSVMDAYVGIGDVGRA 337
           + P+   Y+++++GL KA    +  E+L    D + +  D+V +S+V++ +   G++ RA
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 338 VQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
            +    M+   G  P+V++Y+ ++ GLC+ G++  AC +  ++ ++ +EP   T+S+LI 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM---- 447
           G+C + K+ +   LY  ++    + DAV  S LI GL     +G+A   F Q + M    
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELF-QEMEMREDG 183

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
              P++  +  L+DG C+       +K+  +M      P+V+T++ L+ G+   G L  A
Sbjct: 184 AWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 243

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           + LF +M  +G  P+V+TY+ +IHGL     +     +   M       D   YN LL+ 
Sbjct: 244 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDG 303

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             +   ++ A +LF ++  +   PD ITY  ++ G+C+ +
Sbjct: 304 YCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNAS 343



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 140/590 (23%), Positives = 249/590 (42%), Gaps = 87/590 (14%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVS-SPNI---AQLIHVLLQSDMRDVASHVFDKMV 91
           N ++  L K    + A +  K   +  S +P++   + +I+   +    D A  +  +MV
Sbjct: 13  NVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMV 72

Query: 92  IQFGKTYNFFR-------LFRDSLGDFGCD----------------YSFLIENYVRIGKI 128
            + G   +          L RD   D  C+                +S LI  +    K+
Sbjct: 73  TRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKV 132

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM--RGKG-----FCVY 181
           DE+++++  +      L       L++ L     +G+ Y+L + M  R  G        Y
Sbjct: 133 DEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTY 192

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             L++G  + G +E A  M   +  R  VPN+VT + +L  LC  G +  A  LF  +  
Sbjct: 193 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 252

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G  PNVVT++TLI+  C   K++ A  L + M       D + Y+ L+DG  + GR++E
Sbjct: 253 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEE 312

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-GFLPNVISYSILI 360
             +L      +    D + ++ ++  +     +  A    + M    G  P+V++YSI++
Sbjct: 313 AKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVV 372

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G  +  R VEA     +++ R + P+ +TYSSLIDG CK+G++     +  N+ K    
Sbjct: 373 AGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK---- 428

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V  +++I GL G     +AL    + V   + P++  FN+++   CRL    +  KL
Sbjct: 429 PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL 488

Query: 476 FMLMGMYNIKPDVITHT------------------------------------------V 493
            + M  + ++P ++T+T                                           
Sbjct: 489 LVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSA 548

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVG 542
           LIRG+     +  A+ +  ++  R   P      AI+ GL + G+    G
Sbjct: 549 LIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAG 598



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD-RGLEPDIITYNTIICGYC 604
           R  VAP+   YNV++N L K      A ++  ++ D + + PD++TY+T+I G+C
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFC 56


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 206/412 (50%), Gaps = 5/412 (1%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           +AF +  Q       P +    K++  L  +G+   A  ++  L+  G + +   ++ LI
Sbjct: 48  DAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLI 107

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
             F +  +L+ A +++  M      PD   Y  L++ L KAGR++E        L+RGL 
Sbjct: 108 RYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLT 167

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            ++  ++ +MDA+  +G +  A+  +  M   GF P+V++Y+IL+  LC  GR+  A  L
Sbjct: 168 PNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKL 227

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLI 430
           F ++      P   TYS+L++G  KSG++ +   ++  M+ RG+  D     +++ +L  
Sbjct: 228 FHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAK 287

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            G M    +   +  R    P+ F FNT+MD   +  +     ++F  M     KPD+I+
Sbjct: 288 AGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLIS 347

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           + +LI   A  G  + A  +  +M++ G  P+  TY+++IH L     +     + + ME
Sbjct: 348 YNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEME 407

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             G  PD+  YN L++ML K      A +LF Q+ D+G+EPD ++Y   I G
Sbjct: 408 TAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDG 459



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 236/504 (46%), Gaps = 13/504 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VY 181
           G +D    +   M   G  L P+ + +L++     N  G  + L    + + F     V+
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFN--QAESFACSPTVH 66

Query: 182 EF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            F  L++ L+  G  E A  ++++++Q+G   +    N +++    +GQ+ +A  +F  +
Sbjct: 67  AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            + G +P+  T+  L+NA  K  ++++A   ++ M+E  L P++  Y++L+D   K G+L
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L      RG +  VV ++ ++DA    G VG A + + +M   G  P+  +YS L
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GL + GR+ EA  +F +++ R +   L+ Y+SL+    K+G +   + L   M ++G 
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGF 306

Query: 420 KPDAVVCSLLINGL----MGDALR-FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PDA   + +++ L      DA R  F + V     P+L  +N L+D   R   A    +
Sbjct: 307 HPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQ 366

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M      P+  T+  LI  +A+ G +  A  +  +M   G  PDV+TY+ ++  L 
Sbjct: 367 MLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLG 426

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K         +F+ M+  GV PD   Y V ++ L  +  LD AL LF  +   G   D  
Sbjct: 427 KRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKA 486

Query: 595 TYNTIICGYCSLNSCLIDGYFKSQ 618
            Y  +I          ++   K +
Sbjct: 487 MYRILIRAAHRAGDTELEAQLKHE 510



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 219/505 (43%), Gaps = 50/505 (9%)

Query: 44  KTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNF 100
           + N    A   F    +   SP +    +LI +L+ S   + A  V+ K+V Q G   + 
Sbjct: 42  RGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLV-QKGCQLDR 100

Query: 101 FRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           F             Y+ LI  + R G++D ++E+F  M   G          L++ L  +
Sbjct: 101 FA------------YNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKA 148

Query: 161 NSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
             V +      AM  +G       Y  LM+   + G ++ A  +  ++ +RGF P++VT 
Sbjct: 149 GRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTY 208

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N +L  LC  G++G A  LF  +   G  P+  T+STL+N   K  ++E+A +++  M++
Sbjct: 209 NILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVD 268

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             +  DL+ Y+ L+  L KAG +    +L+     +G   D   F+++MDA         
Sbjct: 269 RGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDA 328

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A + + RM+  G  P++ISY+ILI    + G   +A  +  +++     P   TY+SLI 
Sbjct: 329 AREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIH 388

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIF 456
                G++ + F++ + M   G +PD V                               +
Sbjct: 389 WLATDGQVDEAFAVLEEMETAGCRPDVVT------------------------------Y 418

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N LMD   +        +LF  M    ++PD +++ V I G+A    L  A++LF  M  
Sbjct: 419 NRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKA 478

Query: 517 RGLTPDVITYSAIIHGLFKGKNISV 541
            G   D   Y  +I    +  +  +
Sbjct: 479 VGCPVDKAMYRILIRAAHRAGDTEL 503


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/615 (23%), Positives = 276/615 (44%), Gaps = 97/615 (15%)

Query: 42  LIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFF 101
           L +  +P  A  FF+W  N     + A    VLL +              ++  +     
Sbjct: 50  LQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNA-------------FVKAKRHEEAH 96

Query: 102 RLFRDSLGDFGCD----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           RL ++ L          Y+ +I  + + G++D++ E+   M + G+          M  L
Sbjct: 97  RLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVK---------MDVL 147

Query: 158 VDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           + S                       L+ GL RKG I+ A    + + +    PN++T N
Sbjct: 148 LHST----------------------LIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYN 184

Query: 218 KILKRLCINGQIGNASSLFDVL-----LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
            ++  LC   +I  A  LFD +        G +P+V+++ST+I+A CK  +++KA++ + 
Sbjct: 185 TVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFK 244

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M  +   P+++ YS LIDGL K  R  E  ELLL   ++G  ++++ F++++ A     
Sbjct: 245 RMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 304

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           +  +A Q ++R+L  G  PNV++Y++ + GLC+ GR+ EA  +  +++  ++ P ++TYS
Sbjct: 305 EQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYS 364

Query: 393 SLIDGFCKSGKL-----------------------------------RDGFSLYDNMIKR 417
           S+IDGFCK+G++                                   R+ F ++++M+  
Sbjct: 365 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 424

Query: 418 GLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G  P     ++L++ + G      AL  + +  R    P+   +  L+   CR +R  + 
Sbjct: 425 GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEA 484

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            +   +M   N+ P+      L+  +  QG +  A  +   +++ G  P   T+  ++  
Sbjct: 485 KEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEE 544

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L+  K         KL+   G   D A Y++ +  + K    D A+++  Q+  +G+ PD
Sbjct: 545 LYLRKKWEAA---SKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPD 601

Query: 593 IITYNTIICGYCSLN 607
             TY  ++   C L+
Sbjct: 602 EGTYVAVLRSLCGLD 616



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/503 (23%), Positives = 233/503 (46%), Gaps = 48/503 (9%)

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVY--EFLMNGLLRKGVIENAFHMHR 202
           ++P++  R++  + D +    +++      G     Y    L+N  ++    E A  + +
Sbjct: 41  VTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLK 100

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           + ++    PN +    ++   C  GQ+  A  L D +   G K +V+  STLI   C++ 
Sbjct: 101 EELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKG 160

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-----GLKLD 317
           ++++A + +  M E +  P++I Y+ +++GL KA R+ E  EL      R     G + D
Sbjct: 161 RIDEALEQFKSMGE-ECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPD 219

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE------ 371
           V+ +S+V+DA      V +A + + RM   G  PNV++YS LI GLC+  R  E      
Sbjct: 220 VISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLL 279

Query: 372 -----------------------------ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
                                        AC  F ++L    +P+++TY+  + G CK+G
Sbjct: 280 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 339

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
           ++ + + +   M++  + PD +  S +I+G      M  A   F + +    IP+   F 
Sbjct: 340 RVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 399

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           TL+ G    K++ +  ++   M      P + T+ VL+  +    S+ SA+ ++ +M ++
Sbjct: 400 TLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRK 459

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
              PD  TY+ +I  L + + +        +ME + V P+ AI + L+ +L K+  +D A
Sbjct: 460 KRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEA 519

Query: 578 LKLFGQLTDRGLEPDIITYNTII 600
             +   + + G +P   T+  ++
Sbjct: 520 CSVLDNVVEVGCQPLGETFKILV 542



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/516 (23%), Positives = 232/516 (44%), Gaps = 24/516 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMS---DMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKL 169
           Y+ ++    +  +IDE++E+F  M    +      PD++    ++  L  +  V + Y+ 
Sbjct: 183 YNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEY 242

Query: 170 CRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
            + MR  G       Y  L++GL +         +   + ++GF  NI+  N +L  L  
Sbjct: 243 FKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWK 302

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           N +   A   F+ LL  G KPNVVT++  ++  CK  ++++A+++   M+E  + PD+I 
Sbjct: 303 NDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVIT 362

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           YS +IDG  KAGR+ + +++    +        V F +++  +        A + ++ M+
Sbjct: 363 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 422

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           N GF+P + +Y++L+  +C    +  A  ++ ++  ++ +P   TY+ LI   C++ ++ 
Sbjct: 423 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVD 482

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLM 460
           +     D M    + P+  +C  L+      G + +A       V +   P    F  L+
Sbjct: 483 EAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILV 542

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +     K+     KL    G      D  T+++ +  I   G    A+ +  QM+ +G+ 
Sbjct: 543 EELYLRKKWEAASKLLRSPGFV---ADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVR 599

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD  TY A++  L     +   +  F+ M   G AP +  Y +L+         D A ++
Sbjct: 600 PDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRI 659

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
           F  +   G  P   T  T       L+SCL D  ++
Sbjct: 660 FEAMVAAGFTPQAQTMRT-------LSSCLRDAGYQ 688



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 189/400 (47%), Gaps = 18/400 (4%)

Query: 228 QIGNASSLFDVLLLVGPKP----NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           Q+ +    +      G KP    N  T + L+NAF K  + E+A +L    +E    P+ 
Sbjct: 52  QVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNE 111

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           I+Y+ +I+G  KAG++ +  ELL    +RG+K+DV++ S+++      G +  A++ +  
Sbjct: 112 IMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKS 171

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-----LEPSLLTYSSLIDGF 398
           M      PNVI+Y+ ++ GLC+  R+ EA  LF  +  R       EP +++YS++ID  
Sbjct: 172 M-GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDAL 230

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNL 453
           CK+ ++   +  +  M   G  P+ V  S LI+GL       + L             N+
Sbjct: 231 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINI 290

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             FN ++    +        + F  +     KP+V+T+ V + G+   G +  A  +  +
Sbjct: 291 IDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLE 350

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M++  +TPDVITYS+II G  K   +     +F  M  +   P    +  LL+   +   
Sbjct: 351 MVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKK 410

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTI---ICGYCSLNSCL 610
              A ++   + + G  P + TYN +   +CG  S+ S L
Sbjct: 411 SREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 450



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/395 (21%), Positives = 170/395 (43%), Gaps = 23/395 (5%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           NA+L  L K +    A QFF+        PN+      +H L ++   D A  +  +MV 
Sbjct: 294 NAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVE 353

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
                    ++  D +      YS +I+ + + G++D++ ++F  M        P     
Sbjct: 354 S--------KVTPDVI-----TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 400

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+    +     + +++   M   GF      Y  LM+ +     +E+A  ++ ++ ++ 
Sbjct: 401 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 460

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             P+  T   +++ LC   ++  A    DV+      PN      L+   CK+ ++++A 
Sbjct: 461 RQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEAC 520

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            + + ++E+   P    + IL++ L+   + +  ++LL +    G   D   +S  +   
Sbjct: 521 SVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSP---GFVADAATYSLCVAEI 577

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G    AV+  ++M+  G  P+  +Y  +++ LC   R+  A   F ++  R   P L
Sbjct: 578 CKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGL 637

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           +TY+ LI   C +    + F +++ M+  G  P A
Sbjct: 638 VTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQA 672


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 221/426 (51%), Gaps = 5/426 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++ L++      A  + + +  +G   ++VT N ++   C  GQI  + S+   +L  G
Sbjct: 75  ILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRG 134

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+V+T +TLI   C   +++KA + ++ ++ ++   D I Y  LI+GL K G  K   
Sbjct: 135 YHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAI 194

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L+    +R +K DVV+++ ++D+      VG A   Y  M      PNV++Y+ LI G 
Sbjct: 195 QLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGF 254

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C  G L+EA  L  ++ ++ + P + T+S LID   K GK++    +   M+K  +KPD 
Sbjct: 255 CIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDV 314

Query: 424 VVCSLLING--LMGDA--LRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  + L++G  L+ +    ++ F S+  + + P +  +  ++DG C+ K   + + LF  
Sbjct: 315 VTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEE 374

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M   N+ P+ IT   LI G+   G ++    L  +M  R    DVITYS++I  L K  +
Sbjct: 375 MKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCH 434

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   + +FK M    + PD+  Y +L++ L K   L  A ++F  L  +G   DI TY  
Sbjct: 435 LDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTV 494

Query: 599 IICGYC 604
           +I G+C
Sbjct: 495 MISGFC 500



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 205/409 (50%), Gaps = 30/409 (7%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+NGL + G  + A  + R + +R   P++V  N I+  LC N  +G A +L+  + 
Sbjct: 177 YGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMN 236

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                PNVVT++TLI  FC    L +A  L N M   ++ PD+  +SILID L K G++K
Sbjct: 237 AKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMK 296

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               +L   +   +K DVV ++S++D Y  + +V  A   ++ M   G  P V SY+I+I
Sbjct: 297 AAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMI 356

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC+   + EA  LF ++  + + P+ +T++SLIDG CKSG++   + L D M  R   
Sbjct: 357 DGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQL 416

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            D +  S LI+ L  +                           C L +A   + LF  M 
Sbjct: 417 ADVITYSSLIDALCKN---------------------------CHLDQA---IALFKKMI 446

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              I+PD+ T+T+LI G+   G L  A  +F  +L +G   D+ TY+ +I G  K     
Sbjct: 447 TQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFD 506

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
             L +   ME NG  P+   +++++  L ++   D A KL  ++  RGL
Sbjct: 507 EALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 200/415 (48%), Gaps = 40/415 (9%)

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A +LF+ +LL+ P P    F+ ++++  K  +   A  L   +    +  DL+  +IL
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I+     G++     +L T L RG   DV+  ++++      G+V +A++ +D ++   F
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 350 LPNVISYSILIKGLCQQG----------------------------------RLV-EACG 374
             + ISY  LI GLC+ G                                  +LV EAC 
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           L+ ++  +++ P+++TY++LI GFC  G L +  +L + M  + + PD    S+LI+ L 
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALG 290

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               M  A       ++  + P++  +N+L+DG   +        +F  M    + P V 
Sbjct: 291 KEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQ 350

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           ++T++I G+     +  AI LF +M  + + P+ IT++++I GL K   I+    +   M
Sbjct: 351 SYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKM 410

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
                  D+  Y+ L++ L K C+LD A+ LF ++  + ++PD+ TY  +I G C
Sbjct: 411 RDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLC 465



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/240 (20%), Positives = 109/240 (45%), Gaps = 4/240 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ Y  + ++  +  +F  M+  G+         ++  L  +  V +   L   M+
Sbjct: 317 YNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMK 376

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K        +  L++GL + G I   + +  ++  R  + +++T + ++  LC N  + 
Sbjct: 377 HKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLD 436

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +LF  ++    +P++ T++ LI+  CK  +L+ A +++  ++      D+  Y+++I
Sbjct: 437 QAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMI 496

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  KAG   E   LL    D G   + + F  ++ A     +  +A +    M+  G L
Sbjct: 497 SGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 252/510 (49%), Gaps = 14/510 (2%)

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
            G F   +S LI+    +G ++E+ + F+ M    ++        L+             
Sbjct: 63  FGVFDALFSVLID----LGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 118

Query: 168 KLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
           +  + M G G       Y  +++ + ++G IE A  +  ++  RG +P+ VT N ++   
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGY 178

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
              G++ +    F+ +  +  +P+V+T+++LIN FCK  KL K  + Y  M +  L P++
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNV 238

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + YS L+D   K   +++  +  +     G   +   ++S++DA   IG++  A +  + 
Sbjct: 239 VSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANE 298

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           ML  G   NV++Y+ LI GLC   R+ EA  LFG+++   + P+L +Y++LI GF K+  
Sbjct: 299 MLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKN 358

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLI-PNLFIFNT 458
           +     L + +  RG++PD ++    I GL G    +A +     ++   I  N  I+ T
Sbjct: 359 MDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTT 418

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR- 517
           LMD   +    T+ + L   M   + +  V+T  VLI G+     +S AI  F +M    
Sbjct: 419 LMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDF 478

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           GL P+   Y+A+I GL K   +     +F+ M + G+ PD   Y  L++  +K+ N+  A
Sbjct: 479 GLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEA 538

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L L  ++ + G++ D++ Y +++ G+   N
Sbjct: 539 LALRDKMAEIGMKLDLLAYTSLVWGFSQCN 568



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 195/409 (47%), Gaps = 18/409 (4%)

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPK--PNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            N IL+ + ++        +FD L        P    F  L +       LE+A Q ++ 
Sbjct: 29  ANSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSK 88

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M    + P     + L+    K G+           +  G K  V  ++ ++D     GD
Sbjct: 89  MKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGD 148

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           +  A   ++ M   G +P+ ++Y+ +I G  + GRL +    F ++     EP ++TY+S
Sbjct: 149 IEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNS 208

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMT 448
           LI+ FCKSGKL  G   Y  M + GLKP+ V  S L++      +M  A++F+    R+ 
Sbjct: 209 LINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVG 268

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
            +PN F + +L+D  C++   +D  +L   M    ++ +V+T+T LI G+     +  A 
Sbjct: 269 HVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAE 328

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            LF +M+  G+ P++ +Y+A+IHG  K KN+   L +   ++  G+ PD+ +Y   +  L
Sbjct: 329 KLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGL 388

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
                ++AA  +  ++ + G++ + + Y T           L+D YFKS
Sbjct: 389 CGLEKIEAAKVVMNEMQENGIKANTLIYTT-----------LMDAYFKS 426



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 195/433 (45%), Gaps = 40/433 (9%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           GF V++ L + L+  G++E A     ++ +    P   +CN +L +    G+       F
Sbjct: 62  GFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFF 121

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             ++  G KP V T                                   Y+I+ID ++K 
Sbjct: 122 KDMIGAGSKPTVFT-----------------------------------YNIMIDCMWKE 146

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G ++    L      RGL  D V ++S++D Y  +G +   V  ++ M +    P+VI+Y
Sbjct: 147 GDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITY 206

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI   C+ G+L +    + ++    L+P++++YS+L+D FCK   ++     Y +M +
Sbjct: 207 NSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRR 266

Query: 417 RGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G  P+    + L++     G + DA R   + + + +  N+  +  L+DG C  +R  +
Sbjct: 267 VGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKE 326

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             KLF  M    + P++ ++  LI G     ++  A+ L  ++  RG+ PD++ Y   I 
Sbjct: 327 AEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIW 386

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL   + I     +   M+ NG+  +  IY  L++   K  N    L L  ++ +   E 
Sbjct: 387 GLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEV 446

Query: 592 DIITYNTIICGYC 604
            ++T+  +I G C
Sbjct: 447 TVVTFCVLIDGLC 459



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 201/422 (47%), Gaps = 14/422 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ Y ++G++D++V  F  M  M     PD++    L++C   S  + +  +  R 
Sbjct: 171 YNSMIDGYGKVGRLDDTVYFFEEMKSMSC--EPDVITYNSLINCFCKSGKLPKGLEFYRE 228

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G       Y  L++   ++ +++ A   +  + + G VPN  T   ++   C  G 
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGN 288

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  L + +L VG + NVVT++ LI+  C   ++++A +L+  M+   ++P+L  Y+ 
Sbjct: 289 LSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNA 348

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G  KA  +    ELL     RG++ D++++ + +    G+  +  A    + M   G
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG 408

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N + Y+ L+    + G   E   L  ++     E +++T+  LIDG CK+  +    
Sbjct: 409 IKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAI 468

Query: 409 SLYDNMIKR-GLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDG 462
             +  M    GL+P+A V + +I+GL  +     A   F Q  +  L+P+   + +LMDG
Sbjct: 469 DYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDG 528

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +     + + L   M    +K D++ +T L+ G +    L  A     +M+   + PD
Sbjct: 529 NLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPD 588

Query: 523 VI 524
            +
Sbjct: 589 EV 590



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 167/391 (42%), Gaps = 83/391 (21%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLC 170
           Y+ LI  + + GK+ + +E +  M   G  L P++V    S LVD+    + + Q  K  
Sbjct: 206 YNSLINCFCKSGKLPKGLEFYREMKQSG--LKPNVVS--YSTLVDAFCKEDMMQQAIKFY 261

Query: 171 RAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             MR  G    EF    L+    + G + +AF +  ++++ G   N+VT   ++  LC  
Sbjct: 262 VDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDA 321

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            ++  A  LF  ++  G  PN+ +++ LI+ F K   +++A +L N +    + PDL++Y
Sbjct: 322 ERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLY 381

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD------------- 333
              I GL    +++    ++    + G+K + ++++++MDAY   G+             
Sbjct: 382 GTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQE 441

Query: 334 ----------------------VGRAVQTYDRMLNG-GFLPNVISYSILIKGLCQQGRLV 370
                                 V +A+  + RM N  G  PN   Y+ +I GLC++ ++ 
Sbjct: 442 LDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVK 501

Query: 371 EACGLFGQVLIRRLEPS-----------------------------------LLTYSSLI 395
            A  LF Q+    L P                                    LL Y+SL+
Sbjct: 502 AATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLV 561

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
            GF +  +L+   S  + MI   + PD V+C
Sbjct: 562 WGFSQCNQLQKARSFLEEMIGEEILPDEVLC 592



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 9/277 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  +V+   +D ++E+   +   GI   PDL+     +  L     +     +   
Sbjct: 346 YNALIHGFVKAKNMDRALELLNELKGRGI--QPDLLLYGTFIWGLCGLEKIEAAKVVMNE 403

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G      +Y  LM+   + G      H+  ++ +      +VT   ++  LC N  
Sbjct: 404 MQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKL 463

Query: 229 IGNASSLFDVLL-LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +  A   F  +    G +PN   ++ +I+  CKE +++ A  L+  M +  LVPD   Y+
Sbjct: 464 VSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYT 523

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+DG  K G + E   L     + G+KLD++ ++S++  +     + +A    + M+  
Sbjct: 524 SLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGE 583

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
             LP+ +    ++K   + G + EA GL   ++  +L
Sbjct: 584 EILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQL 620



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/394 (19%), Positives = 157/394 (39%), Gaps = 56/394 (14%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N+++    K+      ++F++        PN+   + L+    + DM   A   +  M  
Sbjct: 207 NSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMR- 265

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           + G   N F             Y+ L++   +IG + ++  +   M ++G+  +      
Sbjct: 266 RVGHVPNEFT------------YTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTA 313

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+  L D+  + +  KL   M   G       Y  L++G ++   ++ A  +  ++  RG
Sbjct: 314 LIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 373

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             P+++     +  LC   +I  A  + + +   G K N + ++TL++A+ K     +  
Sbjct: 374 IQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGL 433

Query: 269 QLYNLMMEMD------------------------------------LVPDLIIYSILIDG 292
            L   M E+D                                    L P+  +Y+ +IDG
Sbjct: 434 HLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDG 493

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L K  ++K    L       GL  D   ++S+MD  +  G++  A+   D+M   G   +
Sbjct: 494 LCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLD 553

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           +++Y+ L+ G  Q  +L +A     +++   + P
Sbjct: 554 LLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILP 587


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 214/431 (49%), Gaps = 9/431 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+  L R+  + +A      +++ G+ P+  T N ++   C   Q+  A  LFD +
Sbjct: 131 TYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKM 190

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            L G   + V+++ LI  FC+  ++++A +L+  + +    PD+  ++ L+ GL  A R 
Sbjct: 191 PLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRG 246

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +EG  +L    + G +     +++++D +        A +  + M + G +P  ++ + +
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +   C++GR+  A  +F  + ++  EP++ TY++++ GFC  GK+    +L D M + G+
Sbjct: 307 VNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGV 366

Query: 420 KPDAVVCSLLINGLMGDA-LRFFFQSVRMT----LIPNLFIFNTLMDGCCRLKRATDTVK 474
           +PD V  +LLI G   D  +   F+ +R+     L  + + +N L+D  C+  +  +   
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACS 426

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  +    I+P+ +T   +I G+   G    A     +M+  G  PD  TYS  I  L 
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLC 486

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K    GL     M +  V P    Y ++++ L KE N   A +++GQ+   G  PD++
Sbjct: 487 KTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVV 546

Query: 595 TYNTIICGYCS 605
           TY T +  YC+
Sbjct: 547 TYTTSVRAYCN 557



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 138/551 (25%), Positives = 239/551 (43%), Gaps = 42/551 (7%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
           DVA  +FDKM ++                     Y+ LIE +   G++DE++E+F  +  
Sbjct: 181 DVAQDLFDKMPLR-------------GFSQDAVSYAALIEGFCETGRVDEALELFRELEQ 227

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIEN 196
             +Y    LV+ L  C       G Y  + + M+  G+      Y  L++   R+   E 
Sbjct: 228 PDMYTHAALVKGL--CDARRGEEGLY--MLQKMKELGWRPATRAYAALVDLWCREQKAEE 283

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  M  ++   G VP  VTC  ++   C  G++  A  +F+ + L G +PNV T++ ++ 
Sbjct: 284 AEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQ 343

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
            FC   K+ KA  L + M E  + PD++ Y++LI G    G ++    LL      GL  
Sbjct: 344 GFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAA 403

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D   ++ ++DA    G V  A   +D +   G  PN ++++ +I GLC+ G+   AC   
Sbjct: 404 DQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFL 463

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-- 434
            +++     P   TYS  I+  CK+   R+G S  D M+++ +KP  V  +++I+ L   
Sbjct: 464 EKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKE 523

Query: 435 ---GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
              G A R + Q V +   P++  + T +   C   R  +   + M M    I  D + +
Sbjct: 524 RNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAY 583

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY----------------SAIIHGLFK 535
             LI G  S G    A+ +   M      P+  T+                      ++K
Sbjct: 584 NTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWK 643

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              ++    +F+LM++N V      Y  +L    +E  LD    L   + +  L  +   
Sbjct: 644 TIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDI 703

Query: 596 YNTIICGYCSL 606
           Y +++  +C L
Sbjct: 704 YTSLVNCFCKL 714



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 169/366 (46%), Gaps = 9/366 (2%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P P   T++ LI A C+ A L  A +  +LM+     PD   ++ LI G  +  +L    
Sbjct: 125 PAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQ 184

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L      RG   D V ++++++ +   G V  A++ +  +      P++ +++ L+KGL
Sbjct: 185 DLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGL 240

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C   R  E   +  ++      P+   Y++L+D +C+  K  +   + + M   GL P A
Sbjct: 241 CDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCA 300

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V C+ ++N     G M  A+R F         PN++ +N ++ G C + +    + L   
Sbjct: 301 VTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQ 360

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    ++PDV+T+ +LIRG    G + SA  L   M   GL  D  TY+ +I  L K   
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +F  +E  G+ P+   +N ++N L K    D A     ++   G  PD  TY+ 
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSP 480

Query: 599 IICGYC 604
            I   C
Sbjct: 481 FIENLC 486



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/509 (19%), Positives = 194/509 (38%), Gaps = 105/509 (20%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G+     R+F +S+   GC+     Y+ +++ +  +GK+ +++ +   M + G+   PD+
Sbjct: 314 GRMSGAVRVF-ESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGV--EPDV 370

Query: 150 VQR--LMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQ 203
           V    L+        +   ++L R M G G       Y  L++ L + G ++ A  +   
Sbjct: 371 VTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +  RG  PN VT N ++  LC  G+   A +  + ++  G  P+  T+S  I   CK   
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKG 490

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA--------------------------- 296
             +     + M++ D+ P  + Y+I+ID LFK                            
Sbjct: 491 SREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTT 550

Query: 297 --------GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
                   GRL E   +++     G+ +D + +++++D +  IG    AV     M    
Sbjct: 551 SVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVA 610

Query: 349 FLPNVISYSI-------------------------------------------------- 358
            +PN  ++ I                                                  
Sbjct: 611 SMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYL 670

Query: 359 -LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +++G  ++ RL E   L   +    L  +   Y+SL++ FCK     D ++L  +MI  
Sbjct: 671 AILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGH 730

Query: 418 GLKPDAVVCSLLINGL----MGDALRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDT 472
           G  P+ +    L++G       D  +  F+ +R      +  ++  ++DG  R       
Sbjct: 731 GFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMC 790

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
             +  ++     KP   T+ +L   ++++
Sbjct: 791 HDMISILEQMKCKPSDETYAMLTEELSTR 819


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 217/430 (50%), Gaps = 14/430 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+ GL + G +  A   + Q+++R  VPN+   N +L  LC  G++  A ++F  +
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGI 64

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME-MDLVPDLIIYSILIDGLFKAGR 298
                 P+V+T + LIN FC+   L+KA +L++ M +   LVP+   Y+ +I    K  R
Sbjct: 65  QC---SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY-DRMLNGGFLPNVISYS 357
           L +  +LL  +       DV+  +SV   +     V  A Q   D +      P++++++
Sbjct: 122 LDQARQLLEES--SCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWN 179

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           ++I G C+ GR+ EA  +   ++     P+ +TY++LIDGFCKSG L +   L+  +  R
Sbjct: 180 VIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239

Query: 418 G--LKPDAVVCSLLINGLM-GDALRFFFQSVRM----TLIPNLFIFNTLMDGCCRLKRAT 470
               +P+ V  + LI+GL   D L   F+ V+      L  + F + TLMDG C+  R +
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  ++F  M      P V+T+T L+      GSL  A  +   M+ +G+ PDV TY+ ++
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GLF+   +      F+ + R    P   +Y+ L+    K   +D A+K + ++ DR L 
Sbjct: 360 EGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLA 419

Query: 591 PDIITYNTII 600
           PD  T   ++
Sbjct: 420 PDPATCKLLV 429



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 188/407 (46%), Gaps = 25/407 (6%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG 95
           N +LA+L +      A+  F+      S   +  LI+   +  + D A  +F +M   F 
Sbjct: 42  NLLLASLCQAGKMDQAMAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNF- 100

Query: 96  KTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RL 153
                      +L      Y+ +I+ Y ++ ++D++ ++    S      S D++    +
Sbjct: 101 -----------ALVPEATTYTAIIKCYCKMDRLDQARQLLEESS----CCSSDVIAITSV 145

Query: 154 MSCLVDSNSVGQYYKLCRAMRGK-----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
                 +  V + Y+L   M  K         +  +++G  + G +  A+ M   ++  G
Sbjct: 146 ARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMG 205

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG--PKPNVVTFSTLINAFCKEAKLEK 266
            VPN VT   ++   C +G +  A  LF VL       +PNVVTF+ LI+  CK  +LE 
Sbjct: 206 CVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEH 265

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           AF+L   M   DL  D   Y+ L+DGL K GR  E + +    L  G    VV +++++ 
Sbjct: 266 AFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVH 325

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A+   G +  A Q    M+  G  P+V +Y++L++GL + G++  A   F ++L  R  P
Sbjct: 326 AHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             + YS+L+ G CK+  + +    Y  M+ R L PD   C LL+  L
Sbjct: 386 CAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEML 432



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 137/292 (46%), Gaps = 35/292 (11%)

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFA 136
           VA +V      + G+    + +  ++L   GC      Y+ LI+ + + G + E++++F 
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEML-ETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIEN 196
            +S    +  P++V                              +  L++GL +   +E+
Sbjct: 235 VLSSRDHHAEPNVV-----------------------------TFNALISGLCKADRLEH 265

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF + +Q+  R    +  T   ++  LC  G+    S +F+ +L  G  P+VVT++TL++
Sbjct: 266 AFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVH 325

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           A CK   L+ A Q+   M+   + PD+  Y++L++GLF+ G+++   E     L      
Sbjct: 326 AHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
             VV+S+++        V  AV+ Y  ML+    P+  +  +L++ LC++GR
Sbjct: 386 CAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 230/437 (52%), Gaps = 7/437 (1%)

Query: 175 GKGFCVYE--FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G GF +Y    L+  L +  ++E A ++++Q++  G  P+++T N ++  L   G++  A
Sbjct: 200 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 259

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             +   +      P+V T+++LI   C+   L+ AF +++ M++    P+ + YS LI+G
Sbjct: 260 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 319

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L   GR+ E  ++L   +++G++  V  ++  + A   I     A++   RM   G  PN
Sbjct: 320 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 379

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V +Y+ LI GL + G+L  A GL+ ++L   L P+ +TY++LI+  C  G+      ++ 
Sbjct: 380 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 439

Query: 413 NMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M   G   +    + +I GL   GD   A+  F + ++M  +P +  +NTL++G     
Sbjct: 440 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 499

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
              +  +L  LM     +PD  T+  L+ G +  G L SA   F +M++ GL P+ ++Y+
Sbjct: 500 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 559

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I G  K   + + L + + ME  G  P++  YN ++N L KE     A K+  ++ ++
Sbjct: 560 TLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQ 619

Query: 588 GLEPDIITYNTIICGYC 604
           GL P++ITY T+I G C
Sbjct: 620 GLLPNVITYTTLIDGLC 636



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 266/597 (44%), Gaps = 91/597 (15%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIF 135
           D+A  VFD+MV +                  GCD     YS LI      G++DE++++ 
Sbjct: 292 DLAFGVFDRMVKE------------------GCDPNSVTYSTLINGLCNEGRVDEALDML 333

Query: 136 AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRK 191
             M + GI  +       ++ L       +  +L   M+ +G       Y  L++GL R 
Sbjct: 334 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 393

Query: 192 GVIENAFHMHRQVIQRGFVPNIVT--------C--------------------------- 216
           G +E A  ++ ++++ G VPN VT        C                           
Sbjct: 394 GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 453

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N+I+K LC+ G I  A  LF+ +L +GP P VVT++TLIN +  +  +  A +L +LM E
Sbjct: 454 NEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 513

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
               PD   Y+ L+ G  K G+L+  +      ++ GL  + V +++++D +   G V  
Sbjct: 514 NGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDI 573

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+   +RM   G  PNV SY+ +I GL ++ R  EA  +  ++  + L P+++TY++LID
Sbjct: 574 ALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLID 633

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----MGDALRFFFQSV-RMTLIP 451
           G C++G+ +  F ++ +M KR   P+    S LI GL      D      + + R  L P
Sbjct: 634 GLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP 693

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL-- 509
           +   F +L+DG   L R      L   M     KP+  T++VL++G+  +  L    +  
Sbjct: 694 DEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAV 753

Query: 510 ----------------------LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
                                 L  +M + G  P + TYS ++ GL +         + K
Sbjct: 754 QHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVK 813

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            M+  G  PD  IY  LL    K   +D ALK+F  +  +G +  +  Y  +IC  C
Sbjct: 814 DMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALC 870



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 222/467 (47%), Gaps = 40/467 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+N L +KG +  A  +  Q+ Q    P++ T   ++   C N  +  A  +FD +
Sbjct: 242 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 301

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PN VT+STLIN  C E ++++A  +   M+E  + P +  Y++ I  L      
Sbjct: 302 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 361

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E  EL+     RG + +V  +++++     +G +  A+  Y +ML  G +PN ++Y+ L
Sbjct: 362 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 421

Query: 360 I-----------------------------------KGLCQQGRLVEACGLFGQVLIRRL 384
           I                                   KGLC  G + +A  LF ++L    
Sbjct: 422 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 481

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRF 440
            P+++TY++LI+G+   G + +   L D M + G +PD    + L++G       ++  F
Sbjct: 482 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 541

Query: 441 FFQS-VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
           +FQ  V   L PN   + TL+DG  +  +    + L   M      P+V ++  +I G++
Sbjct: 542 YFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLS 601

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +   S A  +  +M ++GL P+VITY+ +I GL +         +F  ME+    P++ 
Sbjct: 602 KENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            Y+ L+  L +E   D A  L  ++  +GL PD +T+ ++I G+  L
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVL 708



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 235/530 (44%), Gaps = 33/530 (6%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           + ++ ++ L      Y+ LI      G+   +++IF +M   G   +      ++  L  
Sbjct: 403 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 462

Query: 160 SNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
              + +   L   M   G       Y  L+NG L KG + NA  +   + + G  P+  T
Sbjct: 463 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 522

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N+++      G++ +AS  F  ++  G  PN V+++TLI+   K+ K++ A  L   M 
Sbjct: 523 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME 582

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           EM   P++  Y+ +I+GL K  R  E  ++     ++GL  +V+ +++++D     G   
Sbjct: 583 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQ 642

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A + +  M     LPN+ +YS LI GLCQ+G+  EA  L  ++  + L P  +T++SLI
Sbjct: 643 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLI 702

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL----------------- 438
           DGF   G++   F L   M+  G KP+    S+L+ GL  + L                 
Sbjct: 703 DGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFS 762

Query: 439 ------RFFFQS---VRMTLI---PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                  F   S    RM+ I   P L  ++TL+ G CR  R  +  +L   M      P
Sbjct: 763 PHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCP 822

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           D   +  L+        +  A+ +F  +  +G    +  Y A+I  L K   +     +F
Sbjct: 823 DREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALF 882

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             M       D  ++ VL++ L+KE  LD  +KL   +  +   P+I TY
Sbjct: 883 DNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 932



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 188/396 (47%), Gaps = 40/396 (10%)

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           +TL+    K   +E A  LY  M+   + P L+ ++ LI+ L K G+++E   +L     
Sbjct: 209 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 268

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
             L  DV  ++S++  +    ++  A   +DRM+  G  PN ++YS LI GLC +GR+ E
Sbjct: 269 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 328

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  +  +++ + +EP++ TY+  I   C      +   L   M KRG +P+    + LI+
Sbjct: 329 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 388

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           GL     +  A+  + + ++  L+PN   +N L++  C   R +  +K+F  M  +    
Sbjct: 389 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 448

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +  T+  +I+G+   G +  A++LF +MLK G  P V+TY+ +I+G     N++    + 
Sbjct: 449 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 508

Query: 547 KLMERNGVAPDIAIYNVLLNMLIK---------------ECNL----------------- 574
            LM+ NG  PD   YN L++   K               EC L                 
Sbjct: 509 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKD 568

Query: 575 ---DAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
              D AL L  ++ + G  P++ +YN +I G    N
Sbjct: 569 GKVDIALSLLERMEEMGCNPNVESYNAVINGLSKEN 604



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 204/478 (42%), Gaps = 103/478 (21%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G   N  RL  D + + GC+     Y+ L+  + + GK++ +   F              
Sbjct: 499 GNVNNAARLL-DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYF-------------- 543

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
            Q ++ C ++ N V                 Y  L++G  + G ++ A  +  ++ + G 
Sbjct: 544 -QEMVECGLNPNPVS----------------YTTLIDGHSKDGKVDIALSLLERMEEMGC 586

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PN+ + N ++  L    +   A  + D +   G  PNV+T++TLI+  C+  + + AF+
Sbjct: 587 NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK 646

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLKLDVVVFSSVMDAY 328
           +++ M +   +P+L  YS LI GL + G+  E  E+LL  ++R GL  D V F+S++D +
Sbjct: 647 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA-EILLKEMERKGLAPDEVTFTSLIDGF 705

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA---------------- 372
           V +G +  A     RM++ G  PN  +YS+L+KGL ++  L+E                 
Sbjct: 706 VVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHE 765

Query: 373 --------CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-- 422
                     L  ++     EP+L TYS+L+ G C+ G+  +   L  +M +RG  PD  
Sbjct: 766 KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 825

Query: 423 --------------------------------------AVVCSLLINGLMGDALRFFFQS 444
                                                 A++C+L   G + +A   F   
Sbjct: 826 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 885

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +      +  ++  L+DG  +       +KL  +M   N  P++ T+ +L R ++  G
Sbjct: 886 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 943



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 8/200 (4%)

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           GFSLY          + ++  L    ++  A   + Q +   + P+L  FNTL++   + 
Sbjct: 202 GFSLYSC--------NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKK 253

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  +   +   +  Y++ PDV T+T LI G     +L  A  +F +M+K G  P+ +TY
Sbjct: 254 GKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTY 313

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           S +I+GL     +   L M + M   G+ P +  Y + +  L    + + A++L  ++  
Sbjct: 314 STLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK 373

Query: 587 RGLEPDIITYNTIICGYCSL 606
           RG  P++ TY  +I G   L
Sbjct: 374 RGCRPNVQTYTALISGLSRL 393



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 38/313 (12%)

Query: 95  GKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G+T   F++F D +    C      YS LI    + GK DE+  +   M   G  L+PD 
Sbjct: 639 GRTQFAFKIFHD-MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG--LAPDE 695

Query: 150 VQ--RLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIEN------- 196
           V    L+   V    +   + L R M   G    +  Y  L+ GL ++ ++         
Sbjct: 696 VTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQH 755

Query: 197 ----AFHMHRQVI-------------QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
               +F  H + +             + G  P + T + ++  LC  G+   A  L   +
Sbjct: 756 EAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 815

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+   + +L+ A CK  +++ A ++++ +        L IY  LI  L KAG++
Sbjct: 816 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 875

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E   L    L++    D +V++ ++D  +  G++   ++    M +  F PN+ +Y IL
Sbjct: 876 EEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935

Query: 360 IKGLCQQGRLVEA 372
            + L + G+ +E+
Sbjct: 936 GRELSRIGKSIES 948



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 4/176 (2%)

Query: 134 IFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLL 189
           + A MS++G   + D    L+S L       +  +L + M+ +GFC    +Y  L+    
Sbjct: 776 LLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC 835

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           +   +++A  +   +  +GF  ++     ++  LC  GQ+  A +LFD +L      + +
Sbjct: 836 KNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEI 895

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
            ++ L++   KE +L+   +L ++M   +  P++  Y IL   L + G+  E   L
Sbjct: 896 VWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPL 951


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 253/509 (49%), Gaps = 38/509 (7%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F+++  +        +S LIE + + G++++++E +  M  +G  L+P +          
Sbjct: 361 FYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLG--LTPSV---------- 408

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
                             F V+  ++ G L+    E A  +  +  + G   N+  CN I
Sbjct: 409 ------------------FHVHT-IIQGWLKGQKHEEALKLFDESFETGLA-NVFICNTI 448

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           L  LC  G+I  A+ L   +   G  PNVV+++ ++ A C++  ++ A  +++ M+E  L
Sbjct: 449 LSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGL 508

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            P+   YSILIDG FK    +   E++       ++++ VV+ ++++    +G   +A +
Sbjct: 509 KPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARE 568

Query: 340 TYDRMLNGG-FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
               M+    F  + +SY+ +I G  ++G +  A   + ++    + P+++TY+SL+DG 
Sbjct: 569 LLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGL 628

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           CK+ ++     + D M  +G+K D      LI+G      M  A   F + +   L P+ 
Sbjct: 629 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQ 688

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
            ++N+L+ G   L      + L+  M    ++ D+ T+T LI G+  +G+L  A  L+ +
Sbjct: 689 PVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTE 748

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M   GL PD I Y+ I++GL K       + MF+ M++N V P++ IYN ++    +E N
Sbjct: 749 MQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 808

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICG 602
           LD A +L  ++ D+G+ PD  T++ ++ G
Sbjct: 809 LDEAFRLHDEMLDKGILPDGATFDILVSG 837



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 142/575 (24%), Positives = 249/575 (43%), Gaps = 81/575 (14%)

Query: 109 GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK 168
           GD G     L+   +R  K  E++E+F+   + G      L    +     + ++     
Sbjct: 230 GDNGTT-QLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANS 288

Query: 169 LCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
           L R M+ K  CV     Y  ++   +++G +E+A     +++  G   N+V    ++   
Sbjct: 289 LLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGH 348

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C N  +G+A  LF  +   GP PN VTFS LI  F K  ++EKA + Y  M  + L P +
Sbjct: 349 CKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSV 408

Query: 284 IIYSILIDG----------------------------------LFKAGRLKEGNELLLTA 309
                +I G                                  L K G++ +  ELL   
Sbjct: 409 FHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKM 468

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI--------- 360
             RG+  +VV +++VM A+    ++  A   +  ML  G  PN  +YSILI         
Sbjct: 469 ESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDE 528

Query: 361 --------------------------KGLCQQGRLVEACGLFGQVLI-RRLEPSLLTYSS 393
                                      GLC+ G+  +A  L   ++  +R   S ++Y+S
Sbjct: 529 QNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNS 588

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           +IDGF K G++    + Y+ M   G+ P+ +  + L++GL     M  AL    +     
Sbjct: 589 IIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKG 648

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           +  ++  +  L+ G C+         LF  +    + P    +  LI G  + G++ +A+
Sbjct: 649 VKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAAL 708

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L+ +MLK GL  D+ TY+ +I GL K  N+ +   ++  M+  G+ PD  +Y V++N L
Sbjct: 709 DLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGL 768

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            K+      +K+F ++    + P+++ YN +I G+
Sbjct: 769 SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 803



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 203/422 (48%), Gaps = 32/422 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLL---QSDMRDVASHVFDKMVI 92
           N IL+ L K      A +  +   +    PN+    +V+L   +    D+A  VF  M+ 
Sbjct: 446 NTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLE 505

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +  K  N+              YS LI+   +       +E+   M+   I ++  + Q 
Sbjct: 506 KGLKPNNY-------------TYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQT 552

Query: 153 LMSCLVDSNSVGQYYK----LCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQV 204
           +++ L     VGQ  K    L   +  K FCV    Y  +++G +++G ++ A   + ++
Sbjct: 553 IINGLC---KVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEM 609

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
              G  PN++T   ++  LC N ++  A  + D +   G K ++  +  LI+ FCK++ +
Sbjct: 610 CANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNM 669

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E A  L++ ++E  L P   +Y+ LI G    G +    +L    L  GL+ D+  ++++
Sbjct: 670 ESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 729

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D  +  G++  A   Y  M   G +P+ I Y++++ GL ++G+ V+   +F ++    +
Sbjct: 730 IDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 789

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQS 444
            P++L Y+++I G  + G L + F L+D M+ +G+ PD     +L++G +G      FQ 
Sbjct: 790 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGK-----FQP 844

Query: 445 VR 446
           +R
Sbjct: 845 IR 846



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 140/267 (52%), Gaps = 8/267 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ +++ G++D +V  +  M   GI  SP+++    LM  L  +N + Q  ++   
Sbjct: 586 YNSIIDGFIKEGEMDYAVAAYEEMCANGI--SPNVITYTSLMDGLCKNNRMDQALEMRDE 643

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ KG       Y  L++G  +K  +E+A  +  ++++ G  P+    N ++      G 
Sbjct: 644 MKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGN 703

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L+  +L  G + ++ T++TLI+   KE  L  A  LY  M  + LVPD I+Y++
Sbjct: 704 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTV 763

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +++GL K G+  +  ++        +  +V+++++V+  +   G++  A + +D ML+ G
Sbjct: 764 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 823

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGL 375
            LP+  ++ IL+ G   + + + A  L
Sbjct: 824 ILPDGATFDILVSGKVGKFQPIRAASL 850


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 244/526 (46%), Gaps = 16/526 (3%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           D + + G D     Y+  I  Y R   ++E+ +++  M   G+ L    +  L++ L   
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 161 NSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
               + Y L R M   G       Y  L++ L + G  +    +  +++ RG V ++VT 
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
             ++  L   G+           L     PN VT++ LI+A CK   +++A Q+   M E
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             + P+++ +S +I+G  K G L +  E      +RG+  +VV + +++D +        
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A++ Y  ML  G   N      L+ GL Q G++ EA  LF       L    + Y++LID
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIP 451
           G  K+G +   F     ++ R + PDAVV ++ IN     G   +A  F  +   M L P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +   +NT++   CR       +KL   M M +IKP++IT+  L+ G+   G++  A  L 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M+  G +P  +T+  ++    + + + V L + + M   G+  DI +YN LL +L   
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
                A  +  ++   G+ PD IT+N +I G+C   S  +D  F +
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHC--KSSHLDNAFAT 751



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 237/509 (46%), Gaps = 13/509 (2%)

Query: 106 DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSV 163
           D+L   G  Y+ LI+   +   +DE+ ++   M +  I  SP++V    +++  V    +
Sbjct: 373 DNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI--SPNVVTFSSVINGFVKRGLL 430

Query: 164 GQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            +  +  R M+ +G       Y  L++G  +    + A  ++  ++  G   N    + +
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  L  NG+I  A +LF      G   + V ++TLI+   K   +  AF+    +M+ ++
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +PD ++Y++ I+ L   G+ KE    L    + GLK D   +++++ ++   G+  +A++
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
               M      PN+I+Y+ L+ GL   G + +A  L  +++     PS LT+  ++    
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLF 454
           +S +L     +++ M+  GL  D  V + L+     +G+   A     + +   + P+  
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            FN L+ G C+     +    +  M   NI P++ T   L+ G+ S G +  A  +  +M
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            K GL P+ +TY  +  G  K  N    + ++  M   G  P ++ YN L++   K   +
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGY 603
             A +LF  +  RG+ P   TY+ ++ G+
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGW 879



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 122/539 (22%), Positives = 247/539 (45%), Gaps = 43/539 (7%)

Query: 66  NIAQLIHVLLQSDMRDVASHV--FDKMVIQF------GKTYNFFRLFRD-SLGDFGCDYS 116
           N+ +   VLL+ + + ++ +V  F  ++  F       K   + R+ ++  +      Y 
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
            LI+ + +    D ++E++  M   G+ ++  +V  L++ L  +  + +   L +   G 
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513

Query: 177 GFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G  +    Y  L++GL + G +  AF   ++++ R  +P+ V  N  +  LC+ G+   A
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
            S    +  +G KP+  T++T+I + C++ +  KA +L + M    + P+LI Y+ L+ G
Sbjct: 574 KSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           LF  G +++   LL   +  G     +    V+ A      +   +  ++ M+N G   +
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +  Y+ L++ LC  G   +A  +  ++L   + P  +T+++LI G CKS  L + F+ Y 
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            M+ + + P                              N+  FNTL+ G   + R  + 
Sbjct: 754 QMLHQNISP------------------------------NIATFNTLLGGLESVGRIGEA 783

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             + + M    ++P+ +T+ +L  G   Q +   A+ L+ +M+ +G  P V TY+A+I  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             K   ++    +FK M++ GV P    Y++L++   +  N     K    + ++G  P
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSP 902



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 198/419 (47%), Gaps = 7/419 (1%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G    A  +  ++  +G   ++V  N ++   C  GQ+  A  + D++   G  PNV T+
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           +  I  +C+   +E+AF LY  M+   ++ D++  S L+ GL + GR  E   L      
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G   + V + +++D+    G     +     M++ G + ++++Y+ L+  L +QG+  E
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
                   L   L P+ +TY+ LID  CK+  + +   +   M ++ + P+ V  S +IN
Sbjct: 363 VKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVIN 422

Query: 432 -----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                GL+  A  +        + PN+  + TL+DG  + +     ++++  M    +K 
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV 482

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +      L+ G+   G +  A+ LF      GL+ D + Y+ +I GLFK  ++       
Sbjct: 483 NKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFG 542

Query: 547 K-LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + LM+RN + PD  +YNV +N L        A     ++ + GL+PD  TYNT+I  +C
Sbjct: 543 QELMDRN-MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHC 600



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 198/436 (45%), Gaps = 36/436 (8%)

Query: 199 HMHRQVI-----QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           H H   +     +RG   + VT N +L  LC NGQ+   ++        G  P + +  T
Sbjct: 116 HAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQV--DAAAALADRAGGITPWMSSAGT 173

Query: 254 L----INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           L    I  F        A  + + M    L  D++ Y+ L+ G  +AG++     +L   
Sbjct: 174 LSLLDIAGF---GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMM 230

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
            + G+  +V  ++  +  Y     V  A   Y+ M+  G L +V++ S L+ GLC+ GR 
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  LF ++      P+ +TY +LID   K+G+ ++  SL   M+ RG+  D V  + L
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 430 INGL--------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           ++ L        + D LRF        L PN   +  L+D  C+     +  ++ + M  
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSD---NLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
            +I P+V+T + +I G   +G L  A      M +RG+ P+V+TY  +I G FK +    
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L ++  M   GV  +  I + L+N L +   ++ A+ LF   +  GL  D + Y T   
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT--- 524

Query: 602 GYCSLNSCLIDGYFKS 617
                   LIDG FK+
Sbjct: 525 --------LIDGLFKA 532



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 171/375 (45%), Gaps = 19/375 (5%)

Query: 90  MVIQFGKTYNFFRLFRD-SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           M+ +F +  +F    R+  L      Y+ +I ++ R G+  +++++   M    I   P+
Sbjct: 566 MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI--KPN 623

Query: 149 LV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHR 202
           L+    L++ L  + +V +   L   M   GF      +  ++    +   ++    +H 
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            ++  G   +I   N +L+ LC +G    A+ + + +L  G  P+ +TF+ LI   CK +
Sbjct: 684 WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L+ AF  Y  M+  ++ P++  ++ L+ GL   GR+ E   +L+     GL+ + + + 
Sbjct: 744 HLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            +   +    +   A++ Y  M+  GF+P V +Y+ LI    + G + +A  LF  +  R
Sbjct: 804 ILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKR 863

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSL---YDNMIKRGLKPDAVVCSLLINGLMGDALR 439
            + P+  TY  L+ G+    ++R+G  +     +M ++G  P     S +        + 
Sbjct: 864 GVHPTSCTYDILVSGWS---RIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920

Query: 440 FFFQSVRMTLIPNLF 454
           +  Q     L+ NL+
Sbjct: 921 WQAQR----LLKNLY 931



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 141/339 (41%), Gaps = 52/339 (15%)

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
           AL R  +   V ++ ++ A   + D   A      M   G   + ++ + L+ GLC+ G+
Sbjct: 94  ALLRSSRPTTVAYNILLAA---LSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQ 150

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSL----IDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           +  A           + P + +  +L    I GF   G      S+ D M  +GL  D V
Sbjct: 151 VDAA--AALADRAGGITPWMSSAGTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVV 205

Query: 425 VCSLLINGL----MGDALRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + L+ G       DA R     ++   + PN+  +   +   CR K   +   L+  M
Sbjct: 206 GYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGM 265

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK---- 535
               +  DV+T + L+ G+   G  S A  LF +M K G  P+ +TY  +I  L K    
Sbjct: 266 VRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRG 325

Query: 536 -------GKNISVGLHM------------------------FKLMERNGVAPDIAIYNVL 564
                  G+ +S G+ M                         +    + ++P+   Y VL
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVL 385

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           ++ L K  N+D A ++  ++ ++ + P+++T++++I G+
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGF 424


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 246/502 (49%), Gaps = 13/502 (2%)

Query: 113 CDYSFLIENYVRI-GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           C+Y      ++R+ G++++   +F  M    I  +P+    +   L     + Q      
Sbjct: 125 CNYML---EFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALG 181

Query: 172 AMRGKGFCVYEFLMNGL----LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            MR  GF +  +  NGL    L+ G  + A  +++++I  G  P++ T + ++  L    
Sbjct: 182 KMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRR 241

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
             G    L + +  +G +PN+ T++  I    +  +++ A+ +   M +    PD++ Y+
Sbjct: 242 DTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYT 301

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           +LID L  AG+L +  EL         K D+V + ++M  +   GD+    + +  M   
Sbjct: 302 VLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEAD 361

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G+ P+V++Y+IL++ LC+ G++ +A  +   + +R + P+L TY++LI G     +L + 
Sbjct: 362 GYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEA 421

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN--GLMGD---ALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L++NM   G+ P A    L I+  G +GD   AL  F +  +  ++P++   N  +  
Sbjct: 422 LELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYS 481

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
              + R  +   +F  +    + PD +T+ ++++  +  G +  A  L  +ML  G  PD
Sbjct: 482 LAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPD 541

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           +I  +++I  L+K   +     MF  ++   +AP +  YN+L+  L KE  L  AL LFG
Sbjct: 542 IIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFG 601

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
            + + G  P+ +T+N ++   C
Sbjct: 602 SMKESGCPPNTVTFNALLDCLC 623



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 237/507 (46%), Gaps = 16/507 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+E   + GK+D++ ++   M   GI  +      L+S L++   + +  +L   M 
Sbjct: 370 YTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME 429

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y   ++   + G  E A     ++ +RG +P+I  CN  L  L   G+I 
Sbjct: 430 SLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIR 489

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F+ +   G  P+ VT++ ++  + K  +++KA +L   M+     PD+I+ + LI
Sbjct: 490 EAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLI 549

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L+KAGR+ E  ++     D  L   VV ++ ++      G + +A+  +  M   G  
Sbjct: 550 DTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCP 609

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN ++++ L+  LC+   +  A  +F ++ I    P +LTY+++I G  K G+    F  
Sbjct: 610 PNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWF 669

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMT-LIPNLFIFNTLMDGCC 464
           Y  M K+ L PD V    L+ G++      DA++   + V  + L  +  ++  LM+  C
Sbjct: 670 YHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELME--C 726

Query: 465 RLKRATDTVKLFMLMGMY--NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTP 521
            L  A     +    G+   +I  D      LIR +  Q     A  LF +  K  G  P
Sbjct: 727 ILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHP 786

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
              +Y+ ++ GL         L +F  M+  G  P+I  YN+LL+   K   +D   +L+
Sbjct: 787 TPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELY 846

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNS 608
            ++  RG +P+IIT+N II      NS
Sbjct: 847 NEMLCRGCKPNIITHNIIISALVKSNS 873



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 137/604 (22%), Positives = 267/604 (44%), Gaps = 37/604 (6%)

Query: 36   NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
            NA L +L +      A   F   HNC  SP+      ++    ++   D A+ +  +M+ 
Sbjct: 476  NASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLS 535

Query: 93   Q---------------------FGKTYNFFRLFRD-SLGDFGCDYSFLIENYVRIGKIDE 130
            +                       + +  F   +D  L      Y+ LI    + GK+ +
Sbjct: 536  EGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLK 595

Query: 131  SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL-CRAMR---GKGFCVYEFLMN 186
            ++++F  M + G   +      L+ CL  +++V    K+ CR            Y  ++ 
Sbjct: 596  ALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIY 655

Query: 187  GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL-FDVLLLVGPK 245
            GL+++G    AF  + Q +++   P+ VT   +L  +  +G++ +A  +  + +   G +
Sbjct: 656  GLIKEGRAGYAFWFYHQ-MKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQ 714

Query: 246  PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
             +   +  L+     EA++E+A      ++   +  D  +   LI  L K  +  +  +L
Sbjct: 715  TSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKL 774

Query: 306  LLTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
                    G       ++ +MD  +G      A++ +  M N G  PN+ +Y++L+    
Sbjct: 775  FDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHG 834

Query: 365  QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
            +  R+ E   L+ ++L R  +P+++T++ +I    KS  +     LY  +I     P   
Sbjct: 835  KSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPC 894

Query: 425  VCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
                LI GL+      +A++ F +       PN  I+N L++G  +         LF  M
Sbjct: 895  TYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRM 954

Query: 480  GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                I+PD+ ++T+L+  +   G +  A+  F ++   GL PD ++Y+ +I+GL K + +
Sbjct: 955  IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014

Query: 540  SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
               L +F  M+  G++P++  YN L+        +D A K+F +L   GLEP++ TYN +
Sbjct: 1015 EEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNAL 1074

Query: 600  ICGY 603
            I G+
Sbjct: 1075 IRGH 1078



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 237/549 (43%), Gaps = 36/549 (6%)

Query: 36   NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
            N ++  L K      A+  F         PN      L+  L ++D  D+A  +F +M I
Sbjct: 581  NILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTI 640

Query: 93   QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM--SDMGIYLSPDLV 150
                                C    L  N +  G I E    +A+     M  +LSPD V
Sbjct: 641  ------------------MNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHV 682

Query: 151  Q--RLMSCLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQ 203
                L+  +V    V    K+      +        V+  LM  +L +  IE A      
Sbjct: 683  TLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEG 742

Query: 204  VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL-VGPKPNVVTFSTLINAFCKEA 262
            ++      +      +++ LC   +  +A  LFD     +G  P   +++ L++      
Sbjct: 743  LVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCN 802

Query: 263  KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
              E A +L+  M      P++  Y++L+D   K+ R+ E  EL    L RG K +++  +
Sbjct: 803  ITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHN 862

Query: 323  SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
             ++ A V    + +A+  Y  +++G F P   +Y  LI GL + GR  EA  +F ++   
Sbjct: 863  IIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDY 922

Query: 383  RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDA 437
            + +P+   Y+ LI+GF K+G +     L+  MIK G++PD      +V  L + G + DA
Sbjct: 923  QCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDA 982

Query: 438  LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            + +F +     L P+   +N +++G  + +R  + + LF  M    I P++ T+  LI  
Sbjct: 983  VHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILH 1042

Query: 498  IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
              + G +  A  +F ++   GL P+V TY+A+I G  K  N      +FK M   G +P+
Sbjct: 1043 FGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPN 1102

Query: 558  IAIYNVLLN 566
               +  L N
Sbjct: 1103 AGTFAQLPN 1111



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 196/437 (44%), Gaps = 48/437 (10%)

Query: 210 VPNIV----TCNKILKRLCINGQIGNASSLFDVLL--LVGPKPNVVTFSTLINAFCKEAK 263
           +PNIV    TCN +L+ L ++G++ + + +FD++   ++   PN  T+ T+  A   +  
Sbjct: 115 LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPN--TYLTIFKALSIKGG 172

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           + +A      M +   V +   Y+ LI  L + G  KE  ++    +  GLK  +  +S+
Sbjct: 173 IRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSA 232

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           +M A     D G  +   + M   G  PN+ +Y+I I+ L + GR+ +A G+   +    
Sbjct: 233 LMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEG 292

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN--GLMGD--ALR 439
             P ++TY+ LID  C +GKL     LY  M     KPD V    L++  G  GD   ++
Sbjct: 293 CGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVK 352

Query: 440 FFFQSVRMT------------------------------------LIPNLFIFNTLMDGC 463
            F+  +                                       ++PNL  +NTL+ G 
Sbjct: 353 RFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGL 412

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
             L+R  + ++LF  M    + P   ++ + I      G    A+  F +M KRG+ P +
Sbjct: 413 LNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSI 472

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
              +A ++ L +   I     +F  +   G++PD   YN+++    K   +D A KL  +
Sbjct: 473 AACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTE 532

Query: 584 LTDRGLEPDIITYNTII 600
           +   G EPDII  N++I
Sbjct: 533 MLSEGCEPDIIVVNSLI 549



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 160/336 (47%), Gaps = 9/336 (2%)

Query: 137  YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKG 192
            +   +G + +P+    LM  L+  N      KL   M+  G C     Y  L++   +  
Sbjct: 778  FTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSK 837

Query: 193  VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
             I+  F ++ +++ RG  PNI+T N I+  L  +  I  A  L+  ++     P   T+ 
Sbjct: 838  RIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYG 897

Query: 253  TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
             LI    K  + E+A +++  M +    P+  IY+ILI+G  KAG +    +L    +  
Sbjct: 898  PLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKE 957

Query: 313  GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            G++ D+  ++ +++     G V  AV  ++ +   G  P+ +SY+++I GL +  RL EA
Sbjct: 958  GIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEA 1017

Query: 373  CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
              LF ++  R + P L TY++LI  F  +G +     +++ +   GL+P+    + LI G
Sbjct: 1018 LSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRG 1077

Query: 433  --LMGDALRFFFQSVRMTLI---PNLFIFNTLMDGC 463
                G+  R F    +M ++   PN   F  L + C
Sbjct: 1078 HSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNKC 1113


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 229/494 (46%), Gaps = 39/494 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  +I  Y R G  +++++ F  + + G   S  +   ++  L+  N       +   M+
Sbjct: 111 FVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMK 170

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+  L +   ++ A  +  ++  +G +P+ V+   ++  +C  G++ 
Sbjct: 171 RDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVE 230

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   +     K  V  ++ LIN FC+E K+E+ F+L+N M    + PD+I YS +I
Sbjct: 231 EARELSMRI-----KSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVI 285

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + L + G ++    +L     RG   +V  F+S+M  Y   G +  A+  ++RM+  G  
Sbjct: 286 NTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSE 345

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN ++Y+ LI GLC  G++VEA  +  ++    + P+  TYS+LIDGF K+G L     +
Sbjct: 346 PNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEI 405

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           ++ MI  G                               +PN+ ++  ++D  CR     
Sbjct: 406 WNKMITNG------------------------------CLPNVVVYTCMVDVLCRNSMFN 435

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + L   M   N  P+ IT    I+G+   G    A+ +  QM + G  P+V TY+ ++
Sbjct: 436 HALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVL 495

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GLF  K     L +   +E   +  ++  YN +L+          AL++ G+L   G +
Sbjct: 496 DGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTK 555

Query: 591 PDIITYNTIICGYC 604
           PD ITYNT+I  YC
Sbjct: 556 PDSITYNTVIYAYC 569



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 224/460 (48%), Gaps = 13/460 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++   +  ++D + ++ A MS  G    PD V    ++S +     V +  +L  +
Sbjct: 181 YNMLLKALCKNDRVDAARKLLAEMSYKGCI--PDAVSYTTVVSSMCRLGKVEEAREL--S 236

Query: 173 MRGKGFC-VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           MR K F  VY  L+NG  R+  +E  F +  ++   G  P+++T + ++  L   G +  
Sbjct: 237 MRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEM 296

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A ++   + L G  PNV TF++L+  +    +L +A  L+N M++    P+ + Y+ LI 
Sbjct: 297 ALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIH 356

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL   G++ E   +       G+  +   +S+++D +   GD+  A + +++M+  G LP
Sbjct: 357 GLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLP 416

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV+ Y+ ++  LC+      A  L   +      P+ +T+++ I G C SGK      + 
Sbjct: 417 NVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVL 476

Query: 412 DNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + M + G  P+    + +++GL       +AL+   +   M +  NL  +NT++ G C  
Sbjct: 477 NQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHA 536

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT-PDVIT 525
                 +++   + +   KPD IT+  +I     QG + +AI L  ++ K+G   PDV T
Sbjct: 537 GMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFT 596

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           Y++++ G+     +   +     M   G+ P+ A +N L+
Sbjct: 597 YTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALV 636



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/511 (23%), Positives = 232/511 (45%), Gaps = 22/511 (4%)

Query: 108 LGDFGCDYSFLIENYVRIGKIDESV-----EIFAYMSDMGIYLSPDLVQRLMSCLVDSNS 162
           +G+FGC  S  I N+V    + E+       I+  M   GI L+      L+  L  ++ 
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 163 VGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           V    KL   M  KG C+     Y  +++ + R G +E A  +  ++  + FVP     N
Sbjct: 194 VDAARKLLAEMSYKG-CIPDAVSYTTVVSSMCRLGKVEEARELSMRI--KSFVP---VYN 247

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++   C   ++     LF+ + + G  P+V+T+ST+IN   +   +E A  +   M   
Sbjct: 248 ALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLR 307

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              P++  ++ L+ G F  GRL E  +L    +  G + + V +++++      G +  A
Sbjct: 308 GCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEA 367

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           V    +M   G  PN  +YS LI G  + G LV A  ++ +++     P+++ Y+ ++D 
Sbjct: 368 VSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDV 427

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPN 452
            C++        L +NM      P+ +  +  I GL        A++   Q  +    PN
Sbjct: 428 LCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPN 487

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  +N ++DG    KR  + +++   +    IK +++T+  ++ G    G    A+ +  
Sbjct: 488 VTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAG 547

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA-PDIAIYNVLLNMLIKE 571
           ++L  G  PD ITY+ +I+   K   +   + +   + + G   PD+  Y  LL  +   
Sbjct: 548 KLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNW 607

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +D A+    ++ + G+ P+  T+N ++ G
Sbjct: 608 IGVDEAVVHLDKMINEGICPNRATWNALVRG 638



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 196/414 (47%), Gaps = 11/414 (2%)

Query: 197 AFHMHRQVIQ-RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           A H  + +     F    +T   ++KRL     I     L  ++ L G   N   F  +I
Sbjct: 56  ALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVI 115

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           NA+ +    E+A + +  + E    P + IY+ ++D L    + +  N +       G++
Sbjct: 116 NAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIE 175

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           L+V  ++ ++ A      V  A +    M   G +P+ +SY+ ++  +C+ G++ EA   
Sbjct: 176 LNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA--- 232

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
             + L  R++  +  Y++LI+GFC+  K+ + F L++ M   G+ PD +  S +IN L  
Sbjct: 233 --RELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSE 290

Query: 434 MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           MG+   AL    +       PN+  F +LM G     R  + + L+  M     +P+ + 
Sbjct: 291 MGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVA 350

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  LI G+ S G +  A+ +  +M + G+ P+  TYS +I G  K  ++     ++  M 
Sbjct: 351 YNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMI 410

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            NG  P++ +Y  ++++L +    + AL L   + +    P+ IT+NT I G C
Sbjct: 411 TNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLC 464



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 1/141 (0%)

Query: 467 KRATDTVK-LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           +R  D ++ L  LM +  I  +     ++I      G    A+  F+++ + G  P V  
Sbjct: 86  ERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKI 145

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ ++  L       +   ++  M+R+G+  ++  YN+LL  L K   +DAA KL  +++
Sbjct: 146 YNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMS 205

Query: 586 DRGLEPDIITYNTIICGYCSL 606
            +G  PD ++Y T++   C L
Sbjct: 206 YKGCIPDAVSYTTVVSSMCRL 226


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/508 (25%), Positives = 243/508 (47%), Gaps = 9/508 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  Y   GK DE+  +       G   S      +++CL       +  ++   M+
Sbjct: 204 YNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK 263

Query: 175 GKG---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
                    Y  ++  L + G +E AF +   + + G  PN+ T N ++ RLC   ++  
Sbjct: 264 RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDE 323

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A S+F+ +      P+  TF +LI+   K+ +++ A+++Y  M++ D +P++++Y+ LI 
Sbjct: 324 ACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIR 383

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
             FK  R ++G+++    +  G   D+++ ++ MD     G+  +    ++ +   GFLP
Sbjct: 384 NFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLP 443

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  SYSILI  L + G   E   L+  +  +        Y+++IDGFCKSGK+   + L 
Sbjct: 444 DTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 503

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + M   G  P  V    +++GL     + +A   F ++    +  N  I+++L+DG  ++
Sbjct: 504 EEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKV 563

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  +   +   M    + P+V T   L+ G+     ++ A++ F  M     TP+ ITY
Sbjct: 564 GRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITY 623

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
             +I+GL K +  +     ++ M++ G+ P+   Y  +++ L K  N+  A  LF +   
Sbjct: 624 CILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRA 683

Query: 587 RGLEPDIITYNTIICGYCSLNSCLIDGY 614
            G  PD  +YN +I G    N  L D Y
Sbjct: 684 SGGIPDSASYNAMIEGLSIANRAL-DAY 710



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 245/502 (48%), Gaps = 23/502 (4%)

Query: 95  GKTYNFFRLF----RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           GKT    R+F    RD++ +    Y+ +I    + G ++ + ++   M + G++ +   +
Sbjct: 250 GKTDKALRIFEEMKRDAMPNLPT-YNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTI 308

Query: 151 QRLMSCLVDSNSV--------GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHR 202
             ++  L  +  +        G  YK+C +  G  FC    L++GL ++G +++A+ ++ 
Sbjct: 309 NIMIDRLCKAQKLDEACSIFEGMDYKVC-SPDGATFCS---LIDGLGKQGRVDDAYRIYE 364

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +++    +PN+V    +++      +  +   ++  ++  G  P+++  +T ++   K  
Sbjct: 365 RMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAG 424

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           + EK   L+  +     +PD   YSILI  L KAG  +E  EL     D+G  LD   ++
Sbjct: 425 ETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYN 484

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +V+D +   G V +A Q  + M   G  P V++Y  ++ GL +  RL EA  LF +    
Sbjct: 485 TVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSN 544

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            +E + + YSSLIDGF K G++ + + + + M+++GL P+    + L++GL     + +A
Sbjct: 545 GIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEA 604

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           L  F     +   PN   +  L++G C++++       +  M    +KP+ IT+T +I G
Sbjct: 605 LVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISG 664

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +A  G+++ A  LF +    G  PD  +Y+A+I GL           +F+     G +  
Sbjct: 665 LAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIH 724

Query: 558 IAIYNVLLNMLIK-ECNLDAAL 578
                 LL+ L K EC   AA+
Sbjct: 725 TKTCVALLDALHKAECLEQAAI 746



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 238/503 (47%), Gaps = 14/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+  I+ + ++GK+D + + F  M   G  L PD V    +M  L  +N + +  ++   
Sbjct: 134 YNVCIDCFGKVGKVDMAWKFFHEMKANG--LVPDDVTYTSMMGVLCKANRLDEAVEIFEQ 191

Query: 173 MRG--KGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M    +  C Y +  ++ G    G  + A+ +  +   +G +P++V  N IL  L   G+
Sbjct: 192 MEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGK 251

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +F+ +      PN+ T++ +I   CK   +E AF++ + M E  L P++   +I
Sbjct: 252 TDKALRIFEEMKR-DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINI 310

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +ID L KA +L E   +      +    D   F S++D     G V  A + Y+RML+  
Sbjct: 311 MIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDAD 370

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            +PNV+ Y+ LI+   +  R  +   ++ +++     P L+  ++ +D   K+G+   G 
Sbjct: 371 QIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGR 430

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L++ +  RG  PD    S+LI+     G   +    ++       + +   +NT++DG 
Sbjct: 431 ALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGF 490

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +     +L   M      P V+T+  ++ G+A    L  A +LF +    G+  + 
Sbjct: 491 CKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQ 550

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + YS++I G  K   +     + + M + G+ P++  +N LL+ L+K   ++ AL  F  
Sbjct: 551 VIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQS 610

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + D    P+ ITY  +I G C +
Sbjct: 611 MKDLKCTPNQITYCILINGLCKV 633



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 223/499 (44%), Gaps = 10/499 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L+ + V+  K+ E+ ++   M       +      L+  L +     +   L   M+  G
Sbjct: 32  LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG 91

Query: 178 FCVYEFLMNGLLR----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
           + V   L+  L+R    +G ++ A  +  ++    F  +IV  N  +      G++  A 
Sbjct: 92  YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW 151

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             F  +   G  P+ VT+++++   CK  +L++A +++  M +   VP    Y+ +I G 
Sbjct: 152 KFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGY 211

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
             AG+  E   LL     +G    VV ++ ++      G   +A++ ++ M     +PN+
Sbjct: 212 GSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA-MPNL 270

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            +Y+I+I  LC+ G +  A  +   +    L P++ T + +ID  CK+ KL +  S+++ 
Sbjct: 271 PTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEG 330

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M  +   PD      LI+GL     + DA R + + +    IPN+ ++ +L+    +  R
Sbjct: 331 MDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDR 390

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             D  K++  M      PD++     +  +   G       LF ++  RG  PD  +YS 
Sbjct: 391 KEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSI 450

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +IH L K         ++  M+  G   D   YN +++   K   ++ A +L  ++   G
Sbjct: 451 LIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMG 510

Query: 589 LEPDIITYNTIICGYCSLN 607
             P ++TY +++ G   ++
Sbjct: 511 HHPTVVTYGSVVDGLAKID 529



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 188/432 (43%), Gaps = 39/432 (9%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           GF P   TC +++     + ++  A  L  ++     +P    ++TLI A  +  + ++ 
Sbjct: 21  GFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRM 80

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L+N M E+    ++ + + LI    + GR+     LL          D+V+++  +D 
Sbjct: 81  LALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDC 140

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +  +G V  A + +  M   G +P+ ++Y+ ++  LC+  RL EA  +F Q+   R  P 
Sbjct: 141 FGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPC 200

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
              Y+++I G+  +GK  + +SL +    +G  P  V  + ++      G    ALR F 
Sbjct: 201 AYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFE 260

Query: 443 QSVR----------------------------------MTLIPNLFIFNTLMDGCCRLKR 468
           +  R                                    L PN+   N ++D  C+ ++
Sbjct: 261 EMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQK 320

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   +F  M      PD  T   LI G+  QG +  A  ++ +ML     P+V+ Y++
Sbjct: 321 LDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTS 380

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I   FK      G  M+K M R+G +PD+ + N  ++ + K    +    LF ++  RG
Sbjct: 381 LIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARG 440

Query: 589 LEPDIITYNTII 600
             PD  +Y+ +I
Sbjct: 441 FLPDTRSYSILI 452



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 124/306 (40%), Gaps = 41/306 (13%)

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG- 397
           Q    M   GF P   +   L+    +  +L+EA  L   +   +  P+   Y++LI   
Sbjct: 12  QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71

Query: 398 ----------------------------------FCKSGKLRDGFSLYDNMIKRGLKPDA 423
                                             F + G++    SL D M       D 
Sbjct: 72  SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V+ ++ I+     G +  A +FF +     L+P+   + ++M   C+  R  + V++F  
Sbjct: 132 VLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQ 191

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      P    +  +I G  S G    A  L  +   +G  P V+ Y+ I+  L K   
Sbjct: 192 MEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGK 251

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
               L +F+ M+R+ + P++  YN+++ ML K  N++AA K+   + + GL P++ T N 
Sbjct: 252 TDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINI 310

Query: 599 IICGYC 604
           +I   C
Sbjct: 311 MIDRLC 316


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 210/398 (52%), Gaps = 5/398 (1%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +++ +G  P++VT   ++  LC  G    A +L + +     +P V+ ++T+I+  CK  
Sbjct: 6   RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 65

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            ++ A  L+  M    + P+++ YS LI  L   GR  + + LL   ++R +  DV  FS
Sbjct: 66  HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 125

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++DA+V  G +  A + YD M+     P++++YS LI G C   RL EA  +F  ++ +
Sbjct: 126 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 185

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD---A 437
              P ++TY++LI GFCK  ++ +G  ++  M +RGL  + V  ++LI GL   GD   A
Sbjct: 186 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 245

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
              F + V   + PN+  +NTL+DG C+  +    + +F  +    ++P + T+ ++I G
Sbjct: 246 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 305

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G +     LF  +  +G+ PDV+ Y+ +I G  +  +      +FK M+ +G  P+
Sbjct: 306 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 365

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              YN L+   +++ + +A+ +L  ++   G   D  T
Sbjct: 366 SGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 403



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 198/375 (52%), Gaps = 30/375 (8%)

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           +L D ++  G +P++VT+  ++N  CK    + AF L N M +  L P ++IY+ +IDGL
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K   + +   L      +G++ +VV +SS++      G    A +    M+     P+V
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            ++S LI    ++G+LVEA  L+ +++ R ++PS++TYSSLI+GFC   +L +   +++ 
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           M+ +   PD V                               +NTL+ G C+ KR  + +
Sbjct: 182 MVSKHCFPDVVT------------------------------YNTLIKGFCKYKRVEEGM 211

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           ++F  M    +  + +T+ +LI+G+   G    A  +F +M+  G+ P+++TY+ ++ GL
Sbjct: 212 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 271

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K   +   + +F+ ++R+ + P I  YN+++  + K   ++    LF  L+ +G++PD+
Sbjct: 272 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 331

Query: 594 ITYNTIICGYCSLNS 608
           + YNT+I G+C   S
Sbjct: 332 VAYNTMISGFCRKGS 346



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 201/394 (51%), Gaps = 5/394 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NGL ++G  + AF++  ++ Q    P ++  N I+  LC    + +A +LF  +
Sbjct: 18  TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 77

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +PNVVT+S+LI+  C   +   A +L + M+E  + PD+  +S LID   K G+L
Sbjct: 78  ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 137

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +L    + R +   +V +SS+++ +     +  A Q ++ M++    P+V++Y+ L
Sbjct: 138 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 197

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKG C+  R+ E   +F ++  R L  + +TY+ LI G  ++G       ++  M+  G+
Sbjct: 198 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ +  + L++GL     +  A+  F    R  + P ++ +N +++G C+  +  D   
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  + +  +KPDV+ +  +I G   +GS   A  LF +M + G  P+   Y+ +I    
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           +  +      + K M   G A D +   ++ NML
Sbjct: 378 RDGDREASAELIKEMRSCGFAGDASTIGLVTNML 411



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 34/373 (9%)

Query: 169 LCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           L + M  KG       Y  L++ L   G   +A  +   +I+R   P++ T + ++    
Sbjct: 73  LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 132

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G++  A  L+D ++     P++VT+S+LIN FC   +L++A Q++  M+     PD++
Sbjct: 133 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 192

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ LI G  K  R++EG E+      RGL  + V ++ ++      GD   A + +  M
Sbjct: 193 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 252

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           ++ G  PN+++Y+ L+ GLC+ G+L +A  +F  +   ++EP++ TY+ +I+G CK+GK+
Sbjct: 253 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 312

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
            DG+ L+ N+  +G+KPD V                               +NT++ G C
Sbjct: 313 EDGWDLFCNLSLKGVKPDVVA------------------------------YNTMISGFC 342

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           R     +   LF  M      P+   +  LIR     G   ++  L  +M   G   D  
Sbjct: 343 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 402

Query: 525 TYSAIIHGLFKGK 537
           T   + + L  G+
Sbjct: 403 TIGLVTNMLHDGR 415



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 30/268 (11%)

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           DRM+  G  P++++Y +++ GLC++G    A  L  ++   +LEP +L Y+++IDG CK 
Sbjct: 5   DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 64

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
             + D  +L+  M  +G++                              PN+  +++L+ 
Sbjct: 65  KHMDDALNLFKEMETKGIR------------------------------PNVVTYSSLIS 94

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C   R +D  +L   M    I PDV T + LI     +G L  A  L+ +M+KR + P
Sbjct: 95  CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 154

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            ++TYS++I+G      +     MF+ M      PD+  YN L+    K   ++  +++F
Sbjct: 155 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 214

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSC 609
            +++ RGL  + +TYN +I G      C
Sbjct: 215 REMSQRGLVGNTVTYNILIQGLFQAGDC 242


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 244/508 (48%), Gaps = 9/508 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  Y   GK DE+  +       G   S      +++CL     V +  ++   M+
Sbjct: 338 YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 397

Query: 175 GKGFC---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
                    Y  L++ L R+G +  A  +   + + G  PN++T N ++ RLC   ++  
Sbjct: 398 RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEE 457

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A S+F+ +      PN VTFS+LI+   K  +++ A+ LY  M++   VP  I+Y+ LI 
Sbjct: 458 ACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIR 517

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
             FK GR ++G+++    +  G   D+ + ++ MD     G+  +    +  +   GF+P
Sbjct: 518 SFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIP 577

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  SYSILI GL + G   E   LF  +  +        Y+++IDGFCKSGK+   + L 
Sbjct: 578 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 637

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + M  +G  P  V    +I+GL     + +A   F ++    +  N+ ++++L+DG  ++
Sbjct: 638 EEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKV 697

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  +   +   +    + P+V T   L+  +     ++ A++ F  M      P+ ITY
Sbjct: 698 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITY 757

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           S +I+GL + +  +     ++ M++ G+ P+   Y  +++ L K  N+  A  LF +   
Sbjct: 758 SILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKA 817

Query: 587 RGLEPDIITYNTIICGYCSLNSCLIDGY 614
            G  PD  +YN +I G  S N  + D Y
Sbjct: 818 NGGIPDSASYNAMIEGLSSANKAM-DAY 844



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 241/490 (49%), Gaps = 13/490 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  + RD++ +    Y+ LI+   R GK++ ++EI   M   G++ +   V  ++  L  
Sbjct: 393 FEEMKRDAVPNVPT-YNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCK 451

Query: 160 SNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
           +  + +   +   M  K        +  L++GL + G +++A+ ++ +++  G VP  + 
Sbjct: 452 AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 511

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
              +++     G+  +   ++  ++  G  P++   +T ++   K  + EK   L+  + 
Sbjct: 512 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 571

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
               +PD   YSILI GL KAG   E  EL     ++G  LD   +++V+D +   G V 
Sbjct: 572 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 631

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           +A Q  + M   G  P V++Y  +I GL +  RL EA  LF +     ++ +++ YSSLI
Sbjct: 632 KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 691

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR-MTL 449
           DGF K G++ + + + + ++++GL P+    + L++ L     + +AL   FQS++ +  
Sbjct: 692 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL-ICFQSMKDLKC 750

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            PN   ++ L++G CR+++       +  M    +KP+ IT+T +I G+A  G++  A  
Sbjct: 751 PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG 810

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF +    G  PD  +Y+A+I GL           +F+     G         VLL+ L 
Sbjct: 811 LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALH 870

Query: 570 K-ECNLDAAL 578
           K EC   AA+
Sbjct: 871 KAECLEQAAI 880



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 108/506 (21%), Positives = 215/506 (42%), Gaps = 41/506 (8%)

Query: 138 MSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--VYEFLMNGLLRKGVIE 195
           +S +G    P+LV  ++  L D+N+   Y++       K  C   Y  L+  + R    +
Sbjct: 83  LSALGEKPLPELVIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFD 142

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           +   +  ++   GF P+     +++     + ++  A  +   +     +P    ++ LI
Sbjct: 143 HLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILI 202

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
            A  +  + +    L++ M E+    ++ +++ LI    + GR+     LL       L 
Sbjct: 203 GALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLD 262

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D+V+++  +D +   G V  + + +  M + G +P+ ++Y+ +I  LC+  RL EA  L
Sbjct: 263 ADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVEL 322

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F Q+   R  P    Y+++I G+  +GK  + + L +    +G  P  +  + ++  L  
Sbjct: 323 FEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGK 382

Query: 434 ---MGDALRFFFQ----------------------------------SVRMTLIPNLFIF 456
              + +ALR F +                                    R  L PN+   
Sbjct: 383 KRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTV 442

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N ++D  C+ ++  +   +F  M      P+ +T + LI G+   G +  A  L+ +ML 
Sbjct: 443 NIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLD 502

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G  P  I Y+++I   FK      G  ++K M   G +PD+ + N  ++ + K    + 
Sbjct: 503 CGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEK 562

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICG 602
              LF ++   G  PD  +Y+ +I G
Sbjct: 563 GRALFREINAHGFIPDARSYSILIHG 588



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 5/221 (2%)

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA-VVCSLLINGLMGDALRFFF---QSV 445
            Y+SL+    ++ +      + + M   G  P + +   L+ N +    LR  F   Q++
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 446 R-MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           R     P    +  L+     ++     + LF  M     + +V   T LIR  A +G +
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
            +A+ L  +M    L  D++ Y+  I    K   + +    F  M+ +G+ PD   Y  +
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           + +L K   LD A++LF QL      P    YNT+I GY S
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGS 347



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 72/157 (45%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P+  I   L+  C + ++  +   +   M  +  +P    +T+LI  ++        ++L
Sbjct: 158 PSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLIL 217

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F QM + G   +V  ++ +I    +   +   L +   M+ N +  DI +YNV ++   K
Sbjct: 218 FHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGK 277

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
              +D + K F ++   GL PD +TY ++I   C  N
Sbjct: 278 AGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKAN 314


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 246/525 (46%), Gaps = 45/525 (8%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL--CRAMRGKGFCVYE- 182
           GK+ E   +   M  MG+ L+      L+  L  +  V +      C  +RG  F V   
Sbjct: 38  GKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIAC 97

Query: 183 -FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             L++GL + G I+ A ++   + Q   VPN +T + ++   C  G I  A S    +  
Sbjct: 98  TVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEE 157

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG---- 297
               PNV+T+S+LIN + K+  L  AF++   M+  + +P++  Y+IL+DG FKAG    
Sbjct: 158 KDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDI 217

Query: 298 -------------------------------RLKEGNELLLTALDRGLKLDVVVFSSVMD 326
                                          R++E  EL+      GLK D+V ++++MD
Sbjct: 218 ALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMD 277

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            ++  G V  A+     M +   + +++++++LI  L + G+  +   ++  +    L P
Sbjct: 278 GFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSP 336

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
            L TY+++++G  K G       L++ M  R L P+A+ C+++INGL     M +A+   
Sbjct: 337 DLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDIL 396

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + V M L P    +  L++   + +RA   ++   L+    +K D   + +LI  +   
Sbjct: 397 KEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKL 456

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A  +   M +RG+  D  TY+A+IHG     ++      +  M    V+PDI  Y
Sbjct: 457 GMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETY 516

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           N+LL  L K   +  A  L  ++  RGL P+  TY T++CG+C +
Sbjct: 517 NLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKV 561



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 250/522 (47%), Gaps = 18/522 (3%)

Query: 98  YNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           Y F  L++ +L      YS LI+   ++G I+ +      M +     +      L++  
Sbjct: 115 YLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGY 174

Query: 158 VDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
           V    +   +K+ R M  K      C Y  L++G  + G  + A  ++ ++ Q G   N+
Sbjct: 175 VKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNV 234

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
              +  +  +  +G++  A  L   +   G KP++V ++ L++ F K  K+  A  L   
Sbjct: 235 FILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQE 294

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIG 332
           M   ++V D++ +++LI+ LFK G  K   E + +A+ + GL  D+  ++++++     G
Sbjct: 295 MTSKNVVFDIVTFNVLINCLFKLG--KSDTESIYSAMREMGLSPDLATYNTMLNGNFKKG 352

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           +   A++ ++ M +   +PN I+ +I+I GLC+ GR+  A  +  ++++  L P+  TY 
Sbjct: 353 NWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYR 412

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRM 447
            L++   KS +       ++ ++   LK D  V ++LI+     G+   A          
Sbjct: 413 ILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEER 472

Query: 448 TLIPNLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            +I +   +N L+ G C    LKRA  T   +  M    + PD+ T+ +L+ G++  G +
Sbjct: 473 GIIADTTTYNALIHGYCISSHLKRAFMT---YSTMLSERVSPDIETYNLLLGGLSKAGLI 529

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  L  ++ KRGL P+  TY  ++ G  K +N    L ++  M   G  P    YN+L
Sbjct: 530 HEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNML 589

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +    K   +  A +L  ++  +G+ P   TY+ +ICG+C+L
Sbjct: 590 IGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNL 631



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 206/413 (49%), Gaps = 33/413 (7%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +E A  ++ +++  G  P++VT   IL  LC +G++     L   +  +G   N V+++ 
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L++A  K  K+ +A      M+      D+I  ++LIDGLFK+G++KE   L        
Sbjct: 65  LLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN 124

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L  + + +S+++D    +GD+  A      M     +PNVI+YS LI G  +QG L +A 
Sbjct: 125 LVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 184

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +  +++ +   P++ TY+ L+DG  K+G       LY  M + GLK             
Sbjct: 185 KVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLK------------- 231

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
                             N+FI +  ++   R  R  +  +L   M    +KPD++ +T 
Sbjct: 232 -----------------DNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTN 274

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERN 552
           L+ G    G +SSA+ L  +M  + +  D++T++ +I+ LFK GK+ +  +  +  M   
Sbjct: 275 LMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESI--YSAMREM 332

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           G++PD+A YN +LN   K+ N  +AL+L+ ++  R L P+ IT N +I G C 
Sbjct: 333 GLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCE 385



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/513 (24%), Positives = 211/513 (41%), Gaps = 75/513 (14%)

Query: 65  PNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIEN 121
           PNI   A L+    ++  +D+A  ++ KM  Q G   N F L               + N
Sbjct: 197 PNICTYAILLDGSFKAGWQDIALDLYSKMK-QGGLKDNVFIL------------DAFVNN 243

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG-- 177
             R G+++E+ E+ A M+  G  L PDLV    LM   + S  V     L + M  K   
Sbjct: 244 MKRSGRMEEAEELVAKMASGG--LKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 178 ------------------------------------FCVYEFLMNGLLRKGVIENAFHMH 201
                                                  Y  ++NG  +KG   +A  + 
Sbjct: 302 FDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELW 361

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            ++  R  +PN +TCN ++  LC  G++ NA  +   ++L+G  P   T+  L+N   K 
Sbjct: 362 NEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKS 421

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            + +   Q + L++ M L  D  +Y+ILI  L K G  ++   +L    +RG+  D   +
Sbjct: 422 RRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTY 481

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++  Y     + RA  TY  ML+    P++ +Y++L+ GL + G + EA  L  ++  
Sbjct: 482 NALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKK 541

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGD 436
           R L P+  TY +L+ G CK    ++   +Y  M+ +G  P     ++LI      G M  
Sbjct: 542 RGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQ 601

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD------------TVKLFMLMGMYNI 484
           A     +     + P    ++ L+ G C L +  D              +LF+ M     
Sbjct: 602 AKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGF 661

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            P   T   +    A+ G  + A +L     KR
Sbjct: 662 VPCESTQACISSTFAAPGKKADARMLLKSTYKR 694



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 128/278 (46%), Gaps = 40/278 (14%)

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN------------ 413
           Q  L EA  L+ +++   + P ++T+ S++ G CK GKL +G  L               
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 414 -----------------------MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
                                  MI RG   D + C++LI+GL     + +A   F    
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           ++ L+PN   ++ L+DG C+L            M   +  P+VIT++ LI G   QG L 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  +  +M+ +   P++ TY+ ++ G FK     + L ++  M++ G+  ++ I +  +
Sbjct: 182 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           N + +   ++ A +L  ++   GL+PD++ Y  ++ G+
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGF 279



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 65/136 (47%)

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + + L+  M    I PDV+T   ++ G+   G LS   LL  +M K G+  + ++Y+ ++
Sbjct: 7   EALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILL 66

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
             LFK   ++  L     M   G   D+    VL++ L K   +  A  LF  L    L 
Sbjct: 67  DALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLV 126

Query: 591 PDIITYNTIICGYCSL 606
           P+ ITY+ +I G C L
Sbjct: 127 PNYITYSALIDGRCKL 142



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 11/117 (9%)

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           Q  L  A+ L+ +M+  G+ PDV+T+ +I++GL K   +S G  + + M + G+  +   
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
           Y +LL+ L K   +  AL     +  RG   D+I         C++   LIDG FKS
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIA--------CTV---LIDGLFKS 107


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 244/526 (46%), Gaps = 16/526 (3%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           D + + G D     Y+  I  Y R   ++E+ +++  M   G+ L    +  L++ L   
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 161 NSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
               + Y L R M   G       Y  L++ L + G  +    +  +++ RG V ++VT 
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
             ++  L   G+           L     PN VT++ LI+A CK   +++A Q+   M E
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             + P+++ +S +I+G  K G L +  E      +RG+  +VV + +++D +        
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A++ Y  ML  G   N      L+ GL Q G++ EA  LF       L    + Y++LID
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIP 451
           G  K+G +   F     ++ R + PDAVV ++ IN     G   +A  F  +   M L P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +   +NT++   CR       +KL   M M +IKP++IT+  L+ G+   G++  A  L 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M+  G +P  +T+  ++    + + + V L + + M   G+  DI +YN LL +L   
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
                A  +  ++   G+ PD IT+N +I G+C   S  +D  F +
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHC--KSSHLDNAFAT 751



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 206/436 (47%), Gaps = 36/436 (8%)

Query: 199 HMHRQVI-----QRGFVPNIVTCNKILKRLCINGQIGNASSLFD----VLLLVGPKPNVV 249
           H H   +     +RG   + VT N +L  LC NGQ+  A++L D    +  L     +V+
Sbjct: 116 HAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-----DVI 170

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            ++TLI  +C+      A  + + M    L  D++ Y+ L+ G  +AG++     +L   
Sbjct: 171 GWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMM 230

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
            + G+  +V  ++  +  Y     V  A   Y+ M+  G L +V++ S L+ GLC+ GR 
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  LF ++      P+ +TY +LID   K+G+ ++  SL   M+ RG+  D V  + L
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 430 INGL--------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           ++ L        + D LRF        L PN   +  L+D  C+     +  ++ + M  
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSD---NLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
            +I P+V+T + +I G   +G L  A      M +RG+ P+V+TY  +I G FK +    
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L ++  M   GV  +  I + L+N L +   ++ A+ LF   +  GL  D + Y T   
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT--- 524

Query: 602 GYCSLNSCLIDGYFKS 617
                   LIDG FK+
Sbjct: 525 --------LIDGLFKA 532



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 237/509 (46%), Gaps = 13/509 (2%)

Query: 106 DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSV 163
           D+L   G  Y+ LI+   +   +DE+ ++   M +  I  SP++V    +++  V    +
Sbjct: 373 DNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI--SPNVVTFSSVINGFVKRGLL 430

Query: 164 GQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            +  +  R M+ +G       Y  L++G  +    + A  ++  ++  G   N    + +
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  L  NG+I  A +LF      G   + V ++TLI+   K   +  AF+    +M+ ++
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +PD ++Y++ I+ L   G+ KE    L    + GLK D   +++++ ++   G+  +A++
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
               M      PN+I+Y+ L+ GL   G + +A  L  +++     PS LT+  ++    
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLF 454
           +S +L     +++ M+  GL  D  V + L+     +G+   A     + +   + P+  
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            FN L+ G C+     +    +  M   NI P++ T   L+ G+ S G +  A  +  +M
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            K GL P+ +TY  +  G  K  N    + ++  M   G  P ++ YN L++   K   +
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGY 603
             A +LF  +  RG+ P   TY+ ++ G+
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGW 879



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/539 (22%), Positives = 247/539 (45%), Gaps = 43/539 (7%)

Query: 66  NIAQLIHVLLQSDMRDVASHV--FDKMVIQF------GKTYNFFRLFRD-SLGDFGCDYS 116
           N+ +   VLL+ + + ++ +V  F  ++  F       K   + R+ ++  +      Y 
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
            LI+ + +    D ++E++  M   G+ ++  +V  L++ L  +  + +   L +   G 
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513

Query: 177 GFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G  +    Y  L++GL + G +  AF   ++++ R  +P+ V  N  +  LC+ G+   A
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
            S    +  +G KP+  T++T+I + C++ +  KA +L + M    + P+LI Y+ L+ G
Sbjct: 574 KSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           LF  G +++   LL   +  G     +    V+ A      +   +  ++ M+N G   +
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +  Y+ L++ LC  G   +A  +  ++L   + P  +T+++LI G CKS  L + F+ Y 
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            M+ + + P                              N+  FNTL+ G   + R  + 
Sbjct: 754 QMLHQNISP------------------------------NIATFNTLLGGLESVGRIGEA 783

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             + + M    ++P+ +T+ +L  G   Q +   A+ L+ +M+ +G  P V TY+A+I  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             K   ++    +FK M++ GV P    Y++L++   +  N     K    + ++G  P
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSP 902



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 171/375 (45%), Gaps = 19/375 (5%)

Query: 90  MVIQFGKTYNFFRLFRD-SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           M+ +F +  +F    R+  L      Y+ +I ++ R G+  +++++   M    I   P+
Sbjct: 566 MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI--KPN 623

Query: 149 LV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHR 202
           L+    L++ L  + +V +   L   M   GF      +  ++    +   ++    +H 
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            ++  G   +I   N +L+ LC +G    A+ + + +L  G  P+ +TF+ LI   CK +
Sbjct: 684 WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L+ AF  Y  M+  ++ P++  ++ L+ GL   GR+ E   +L+     GL+ + + + 
Sbjct: 744 HLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            +   +    +   A++ Y  M+  GF+P V +Y+ LI    + G + +A  LF  +  R
Sbjct: 804 ILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKR 863

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSL---YDNMIKRGLKPDAVVCSLLINGLMGDALR 439
            + P+  TY  L+ G+    ++R+G  +     +M ++G  P     S +        + 
Sbjct: 864 GVHPTSCTYDILVSGWS---RIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920

Query: 440 FFFQSVRMTLIPNLF 454
           +  Q     L+ NL+
Sbjct: 921 WQAQR----LLKNLY 931



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 148/359 (41%), Gaps = 71/359 (19%)

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P  + Y+IL+  L           +L     RG+  D V  ++++      G V  A   
Sbjct: 101 PTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 341 YDRMLNGGFLP-NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            DR   GG    +VI ++ LI G C+ G    A  +  ++  + L   ++ Y++L+ GFC
Sbjct: 158 ADR--GGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           ++G++     + D M + G+ P+                         T  P +  +   
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVA-----------------------TYTPFIVYY--- 249

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
               CR K   +   L+  M    +  DV+T + L+ G+   G  S A  LF +M K G 
Sbjct: 250 ----CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGA 305

Query: 520 TPDVITYSAIIHGLFK-----------GKNISVGLHM----------------------- 545
            P+ +TY  +I  L K           G+ +S G+ M                       
Sbjct: 306 APNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKD 365

Query: 546 -FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             +    + ++P+   Y VL++ L K  N+D A ++  ++ ++ + P+++T++++I G+
Sbjct: 366 TLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGF 424


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/411 (30%), Positives = 215/411 (52%), Gaps = 10/411 (2%)

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           + +   G  P++ T   I+  LC         S+  V+  +G  P VVTF+TLIN  C E
Sbjct: 95  KHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAE 154

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV- 320
             + +A +  + + +M    +   Y  +I+GL KAG        L     R   LDVV+ 
Sbjct: 155 GNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIA 214

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           +S++MD+    G V  A+  +  M + G  P++++Y+ LI GLC  GR  EA  L G ++
Sbjct: 215 YSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMM 274

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMG 435
            + + P++ T++ L+D FCK G +    ++   M+  G++PD V  + +I+G      MG
Sbjct: 275 RKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMG 334

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN--IKPDVITHTV 493
           DA++ F   +    +PNL  +++L+ G C+ K       LF+L  M N  + PDV+T + 
Sbjct: 335 DAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKA--LFLLGEMVNSGLNPDVVTWST 392

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI G    G   +A  LF  M +    P++ T + I+ GLFK +  S  + +F+ ME+  
Sbjct: 393 LIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMN 452

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  ++ IYN++L+ +     L+ A +LF  L  +G++ D++ Y T+I G C
Sbjct: 453 LELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLC 503



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 210/393 (53%), Gaps = 6/393 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC-NKILKRLCINGQIGNASSLFDV 238
            Y  ++NGL + G    A     ++  R    ++V   + I+  LC +G +  A +LF  
Sbjct: 178 TYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSG 237

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G +P++V +++LI+  C   + ++A  L   MM   ++P++  +++L+D   K G 
Sbjct: 238 MTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGM 297

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +     ++   +  G++ DVV ++SV+  +  +  +G AV+ ++ M++ GFLPN+++YS 
Sbjct: 298 ISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSS 357

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI G C+   + +A  L G+++   L P ++T+S+LI GFCK+GK      L+  M +  
Sbjct: 358 LIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHD 417

Query: 419 LKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             P+   C+++++GL       +A+  F +  +M L  N+ I+N ++DG C   +  D  
Sbjct: 418 QHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQ 477

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +LF  +    IK DV+ +T +I+G+  +G L  A  L  +M + G  P+  TY+  + GL
Sbjct: 478 ELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGL 537

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
            +  +IS       LM+  G++ D     +L++
Sbjct: 538 LQRYDISRSTKYLLLMKGKGLSADATTTELLIS 570



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 186/393 (47%), Gaps = 17/393 (4%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A S F  ++++ P P    F+ L     K         L   +  + + PD+   +I+I+
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIIN 114

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L        G  +L      G+   VV F+++++     G+V RA +  D + + G   
Sbjct: 115 CLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQS 174

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE-PSLLTYSSLIDGFCKSGKLRDGFSL 410
           N  +Y  +I GLC+ G    A     ++  R  +   ++ YS+++D  CK G + +  +L
Sbjct: 175 NSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNL 234

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M  +G++PD V  + LI+GL       +A       +R  ++PN+  FN L+D  C+
Sbjct: 235 FSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCK 294

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
               +    +   M    ++PDV+T+  +I G      +  A+ +F  M+ +G  P+++T
Sbjct: 295 DGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVT 354

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           YS++IHG  K KNI+  L +   M  +G+ PD+  ++ L+    K    +AA +LF  + 
Sbjct: 355 YSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMH 414

Query: 586 DRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
           +    P++ T        C++   ++DG FK Q
Sbjct: 415 EHDQHPNLQT--------CAI---ILDGLFKCQ 436



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 60/146 (41%)

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
            +D    LK     +  F  M + N  P     T L   I      ++ I L   +   G
Sbjct: 42  FLDSMRDLKSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLG 101

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           + PDV T + II+ L    +   G  +  +M + GV P +  +  L+N L  E N+  A 
Sbjct: 102 IKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAA 161

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYC 604
           +    L D G + +  TY  II G C
Sbjct: 162 RFADSLEDMGHQSNSYTYGAIINGLC 187


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 251/498 (50%), Gaps = 14/498 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  + + G+  ++  +F  M+  G+   PD+V    ++  L  + ++ +   + R 
Sbjct: 268 YNTVIHGFFKEGETGKACSLFHEMTRQGV--KPDVVTYNLIIDALCKARAMDKAELVLRQ 325

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  +++G    G ++ A  M R++  RG +PNIV CN  L  LC +G+
Sbjct: 326 MTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGR 385

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A+ +FD +   G KP++V++ TL++ +  E        L+N M    +  D  +++I
Sbjct: 386 SKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNI 445

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    K G + +   +      +G+  DVV +S+V+ A+  +G +  A++ +++M+  G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL-EPSLLTYSSLIDGFCKSGKLRDG 407
             PN   Y  +I+G C  G LV+A  L  +++ + +  P ++ ++S+I+  CK G++ D 
Sbjct: 506 IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDA 565

Query: 408 FSLYDNMIKRGLKPDAVVCSLLING--LMGDALRFFFQSVRMTLI---PNLFIFNTLMDG 462
             ++D +   G +PD +  + LI+G  L+G   + F     M ++    ++  ++TL+DG
Sbjct: 566 HDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDG 625

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +  R  D + LF  M    +KP+ +T+ +++ G+   G   +A   F +M++ G T  
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVT 685

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V  Y  I+ GL +       + +F+ +    V   I I N ++N + K    + A +LF 
Sbjct: 686 VSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFA 745

Query: 583 QLTDRGLEPDIITYNTII 600
            ++  GL P+  TY  +I
Sbjct: 746 TISASGLLPNESTYGVMI 763



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 242/543 (44%), Gaps = 49/543 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS L++   R  + D  + +F  +   G+ +       L+ CL  +N   +   +     
Sbjct: 160 YSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRM 219

Query: 175 GKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFV--PNIVTCNKILKRLCING 227
            +  CV     Y  ++ GL    + + A  + + + + G    PN+V  N ++      G
Sbjct: 220 SELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEG 279

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           + G A SLF  +   G KP+VVT++ +I+A CK   ++KA  +   M      PD + Y+
Sbjct: 280 ETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYN 339

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +I G    GRLKE  ++      RGL  ++V+ +S + +    G    A + +D M   
Sbjct: 340 CMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAK 399

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQ--------------VLIRR---------- 383
           G  P+++SY  L+ G   +G   +  GLF                +LI            
Sbjct: 400 GHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDA 459

Query: 384 -----------LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
                      + P ++TYS++I  F + G+L D    ++ M+ RG++P+  V   +I G
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQG 519

Query: 433 LMGDALRFFFQSVRMTLI------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                     + +   +I      P++  FN++++  C+  R  D   +F L+     +P
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERP 579

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           DVIT T LI G    G +  A  +   M   G+  D++TYS ++ G FK   I+ GL +F
Sbjct: 580 DVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLF 639

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + M+R GV P+   Y ++L  L +     AA K F ++ + G    +  Y  I+ G C  
Sbjct: 640 REMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR- 698

Query: 607 NSC 609
           N+C
Sbjct: 699 NNC 701



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 221/426 (51%), Gaps = 20/426 (4%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP--KPNVVTFSTLINA 257
           +HR + + G VPN+ + + ILK LC N     A  LF ++   G    PNVV ++T+I+ 
Sbjct: 216 LHR-MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHG 274

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           F KE +  KA  L++ M    + PD++ Y+++ID L KA  + +   +L      G + D
Sbjct: 275 FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
            V ++ ++  Y  +G +  A + + +M + G +PN++  +  +  LC+ GR  EA  +F 
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFD 394

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----G 432
            +  +  +P +++Y +L+ G+   G   D   L+++M   G+  D  V ++LI+     G
Sbjct: 395 SMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRG 454

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
           ++ DA+  F +  +  + P++  ++T++    R+ R TD ++ F  M    I+P+   + 
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYH 514

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLT-PDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +I+G    G L  A  L  +M+ +G+  PD++ ++++I+ L K   +     +F L+  
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTD 574

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLI 611
            G  PD+  +  L++       +D A K+   +   G+E DI+TY+T           L+
Sbjct: 575 IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYST-----------LL 623

Query: 612 DGYFKS 617
           DGYFK+
Sbjct: 624 DGYFKN 629



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 239/510 (46%), Gaps = 17/510 (3%)

Query: 108 LGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDS 160
           + + GC      YS +++          ++++F  M+  G   SP++V    ++      
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278

Query: 161 NSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
              G+   L   M  +G       Y  +++ L +   ++ A  + RQ+   G  P+ VT 
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++      G++  A+ +F  +   G  PN+V  ++ + + CK  + ++A ++++ M  
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
               PD++ Y  L+ G    G   +   L  +    G+  D  VF+ ++ AY   G V  
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+  +  M   G  P+V++YS +I    + GRL +A   F Q++ R ++P+   Y S+I 
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQ 518

Query: 397 GFCKSGKLRDGFSLYDNMIKRGL-KPD-----AVVCSLLINGLMGDALRFFFQSVRMTLI 450
           GFC  G L     L   MI +G+ +PD     +V+ SL  +G + DA   F     +   
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGER 578

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P++  F +L+DG C + +     K+   M +  ++ D++T++ L+ G    G ++  + L
Sbjct: 579 PDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTL 638

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F +M ++G+ P+ +TY  ++ GLF+          F  M  +G    ++IY ++L  L +
Sbjct: 639 FREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR 698

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               D A+ LF +L    ++  I   NT+I
Sbjct: 699 NNCADEAIILFQKLGTMNVKFSITILNTMI 728



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 231/473 (48%), Gaps = 10/473 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  Y  +G++ E+ ++F  M   G+  +  +    ++ L       +  ++  +M 
Sbjct: 338 YNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMT 397

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++G   +G   +   +   +   G   +    N ++      G + 
Sbjct: 398 AKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVD 457

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  +F  +   G  P+VVT+ST+I+AF +  +L  A + +N M+   + P+  +Y  +I
Sbjct: 458 DAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSII 517

Query: 291 DGLFKAGRLKEGNELLLTALDRGL-KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
            G    G L +  EL+   +++G+ + D+V F+SV+++    G V  A   +D + + G 
Sbjct: 518 QGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGE 577

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+VI+++ LI G C  G++ +A  +   + +  +E  ++TYS+L+DG+ K+G++ DG +
Sbjct: 578 RPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLT 637

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L+  M ++G+KP+ V   +++ GL        A + F + +       + I+  ++ G C
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           R   A + + LF  +G  N+K  +     +I  +        A  LF  +   GL P+  
Sbjct: 698 RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNES 757

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           TY  +I  L K   +    +MF  ME++G+ P   + N ++ ML+++  +  A
Sbjct: 758 TYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 14/276 (5%)

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS-L 410
            V +YSIL+   C+  R      LFG +L   L+   +T S+L+   C + +  +  + L
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVL 215

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRM--TLIPNLFIFNTLMDGC 463
              M + G  P+    S+++ GL  +     AL  F    +      PN+  +NT++ G 
Sbjct: 216 LHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGF 275

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            +         LF  M    +KPDV+T+ ++I  +    ++  A L+  QM   G  PD 
Sbjct: 276 FKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDT 335

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY+ +IHG      +     MF+ M+  G+ P+I I N  L  L K      A ++F  
Sbjct: 336 VTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDS 395

Query: 584 LTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           +T +G +PDI++Y T++ GY S      +G+F   I
Sbjct: 396 MTAKGHKPDIVSYCTLLHGYAS------EGWFADMI 425



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 13/246 (5%)

Query: 372 ACGLFGQVLIRRLEPSLL-----TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           A  LF +V   +  P ++     TYS L+D  C++ +   G  L+  +++ GLK   +  
Sbjct: 136 ALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITA 195

Query: 427 SLLINGL-----MGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           S L+  L       +A+      +  +  +PN+F ++ ++ G C    +   + LF +M 
Sbjct: 196 STLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMA 255

Query: 481 MYN--IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
                  P+V+ +  +I G   +G    A  LF +M ++G+ PDV+TY+ II  L K + 
Sbjct: 256 KEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     + + M  NG  PD   YN +++       L  A K+F ++  RGL P+I+  N+
Sbjct: 316 MDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNS 375

Query: 599 IICGYC 604
            +   C
Sbjct: 376 FLASLC 381



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/342 (20%), Positives = 137/342 (40%), Gaps = 29/342 (8%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +A  +++ +I    P P I FF    N              L  D R + +H    +V  
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFNSVINS-------------LCKDGRVMDAHDIFDLVTD 574

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
            G+  +               ++ LI+ Y  +GK+D++ +I   M  +G+         L
Sbjct: 575 IGERPDVI------------TFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTL 622

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +     +  +     L R M+ KG       Y  ++ GL R G    A     ++I+ G 
Sbjct: 623 LDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGT 682

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
              +     IL  LC N     A  LF  L  +  K ++   +T+INA  K  + E+A +
Sbjct: 683 TVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKE 742

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L+  +    L+P+   Y ++I  L K G +++ N +  +    G+     + + ++   +
Sbjct: 743 LFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLL 802

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
             G++ +A     ++     L    + S+++    ++G+  E
Sbjct: 803 EKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHE 844



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/350 (19%), Positives = 137/350 (39%), Gaps = 53/350 (15%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LIH   +  M D A  +F +M  Q G + +               YS +I  + R+G++ 
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQ-GVSPDVV------------TYSTVISAFSRMGRLT 492

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF-----CVYEFL 184
           +++E F  M   GI  +  +   ++        + +  +L   M  KG        +  +
Sbjct: 493 DAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSV 552

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI------------------- 225
           +N L + G + +A  +   V   G  P+++T   ++   C+                   
Sbjct: 553 INSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGV 612

Query: 226 ----------------NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
                           NG+I +  +LF  +   G KPN VT+  ++    +  +   A +
Sbjct: 613 ETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARK 672

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
            ++ M+E      + IY I++ GL +     E   L        +K  + + +++++A  
Sbjct: 673 KFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMY 732

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            +     A + +  +   G LPN  +Y ++I  L + G + +A  +F  +
Sbjct: 733 KVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSM 782


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 205/422 (48%), Gaps = 30/422 (7%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NG  ++G I+ A    ++ +  GF P+  T N ++  LC  G   +A  + D +LL G
Sbjct: 279 LINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGG 338

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P++ T+++LI+  CK  ++E+A ++ + M+  D  P+ + Y+ +I  L K  R+ E  
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT 398

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           E+      +G+  DV  F+S++       +   A+  ++ M   G  P+  +Y++LI  L
Sbjct: 399 EIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C   +L EA  L  ++ +     +++ Y++LIDGFCK+ ++ +   ++D M  +G+  D+
Sbjct: 459 CSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDS 518

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           V                               +NTL+DG C+ KR  D  +L   M M  
Sbjct: 519 VT------------------------------YNTLIDGLCKSKRVEDAAQLMDQMIMEG 548

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           ++PD  T+  L+      G +  A  +   M   G  PD++TY+ +I GL K   + V  
Sbjct: 549 LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVAS 608

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            + + ++  G+      YN ++  L K      A++LF ++ D+   PD ITY  +  G 
Sbjct: 609 RLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGL 668

Query: 604 CS 605
           C+
Sbjct: 669 CN 670



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/581 (24%), Positives = 261/581 (44%), Gaps = 62/581 (10%)

Query: 38  ILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGK- 96
           ++  L +  +   A++ F W       PN                +S V+++++ + GK 
Sbjct: 67  LIETLRRQTDEVAALRVFNWASK---QPNFVP-------------SSSVYEEILRKLGKA 110

Query: 97  -TYNFFRLFRDSLGDFGCDYS---FLI--ENYVRIGKIDESVEIFAYMSDMGIYLSPD-- 148
            ++ + R   + +   GC++    FLI  E+Y +    DE V I   M D    + PD  
Sbjct: 111 GSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMED-EYRIKPDTR 169

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
               L++ LVD+N +                             ++E+A   H  +++R 
Sbjct: 170 FYNVLLNVLVDANKLK----------------------------LVESA---HSSMVRRR 198

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
              ++ T N ++K LC   Q+  A  + + +   G  P+  TF+T++  + +   L+ A 
Sbjct: 199 IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL 258

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           ++   M+E       +  ++LI+G  K GR+ +    +  A+  G + D   ++++++  
Sbjct: 259 RIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGL 318

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             IG    A++  D ML GG  P++ +Y+ LI GLC+ G + EA  +  Q++ R   P+ 
Sbjct: 319 CKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNA 378

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +TY+++I   CK  ++ +   +   +  +G+ PD    + LI GL        A+  F +
Sbjct: 379 VTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEE 438

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                  P+ F +N L+D  C  ++  + + L   M +     +V+ +  LI G      
Sbjct: 439 MKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKR 498

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A  +F +M  +G++ D +TY+ +I GL K K +     +   M   G+ PD   YN 
Sbjct: 499 IEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNS 558

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           LL    K  ++  A  +   +T  G  PDI+TY T+I G C
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 208/446 (46%), Gaps = 19/446 (4%)

Query: 105 RDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           ++ + ++GC       + LI  + + G+ID+++         G          L++ L  
Sbjct: 261 KEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCK 320

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
                   ++  AM   G       Y  L++GL + G IE A  +  Q++ R   PN VT
Sbjct: 321 IGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVT 380

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N I+  LC   ++  A+ +  +L   G  P+V TF++LI   C  +  + A  L+  M 
Sbjct: 381 YNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMK 440

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
                PD   Y++LID L  + +L+E   LL      G   +VV++++++D +     + 
Sbjct: 441 GKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIE 500

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A + +D M   G   + ++Y+ LI GLC+  R+ +A  L  Q+++  L P   TY+SL+
Sbjct: 501 EAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLL 560

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-------MGDALRFFFQSVRMT 448
             FCK+G ++    +   M   G  PD V  + LI+GL       +   L    Q   M 
Sbjct: 561 THFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMV 620

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS-QGSLSSA 507
           L P+   +N ++    +  R  + ++LF  M   +  PD IT+ ++ RG+ +  G +  A
Sbjct: 621 LTPH--AYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEA 678

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGL 533
           +    +M++RG  P+  ++  +  GL
Sbjct: 679 VDFTVEMIERGNIPEFSSFVMLAEGL 704



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 186/373 (49%), Gaps = 14/373 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI    ++G+I+E+V+I   M       SP+ V    ++S L   N V +  ++ R 
Sbjct: 346 YNSLISGLCKLGEIEEAVKILDQMVSRDC--SPNAVTYNAIISSLCKENRVDEATEIARL 403

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  KG     C +  L+ GL      ++A  +  ++  +G  P+  T N ++  LC + +
Sbjct: 404 LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRK 463

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A +L   + L G   NVV ++TLI+ FCK  ++E+A ++++ M    +  D + Y+ 
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNT 523

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDGL K+ R+++  +L+   +  GL+ D   ++S++  +   GD+ +A      M + G
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG 583

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++++Y+ LI GLC+ GR+  A  L   + ++ +  +   Y+ +I    K  +  +  
Sbjct: 584 CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAM 643

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL------MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            L+  M+ +   PDA+   ++  GL      +G+A+ F  + +    IP    F  L +G
Sbjct: 644 RLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEG 703

Query: 463 CCRLKRATDTVKL 475
            C L      VKL
Sbjct: 704 LCTLSMDDTLVKL 716



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 185/413 (44%), Gaps = 55/413 (13%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           Q  FVP+     +IL++L   G       + + + L G + +   F   + ++ K     
Sbjct: 90  QPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGK----- 144

Query: 266 KAFQLYNLMM--------EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
             F+LY+ ++        E  + PD   Y++L++ L  A +LK       + + R ++ D
Sbjct: 145 --FELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHD 202

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           V  F+                                   ILIK LC+  ++  A  +  
Sbjct: 203 VSTFN-----------------------------------ILIKALCKAHQVRPAILMME 227

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
           ++    L P   T+++++ G+ + G L     + + M++ G     V  ++LING     
Sbjct: 228 EMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQG 287

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            +  AL F  ++V     P+ F +NTL++G C++  A   +++   M +  + PD+ T+ 
Sbjct: 288 RIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYN 347

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G+   G +  A+ +  QM+ R  +P+ +TY+AII  L K   +     + +L+   
Sbjct: 348 SLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK 407

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           G+ PD+  +N L+  L    N  +A+ LF ++  +G  PD  TYN +I   CS
Sbjct: 408 GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCS 460



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 151/369 (40%), Gaps = 42/369 (11%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM-DLVPDLIIYSILIDGLFKAG------R 298
           P   T   LI    ++     A +++N   +  + VP   +Y  ++  L KAG      R
Sbjct: 59  PPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRR 118

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + E  +L     DRG+ L  V      + Y  +  + + ++   R+      P+   Y++
Sbjct: 119 VLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIK-----PDTRFYNV 173

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+  L    +L         ++ RR+   + T++ LI   CK+ ++R    + + M   G
Sbjct: 174 LLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYG 233

Query: 419 LKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           L PD    + ++ G                     +I    +DG  R+K           
Sbjct: 234 LSPDETTFTTIMQG---------------------YIEGGNLDGALRIKEQ--------- 263

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M  Y      +T  VLI G   QG +  A+    + +  G  PD  TY+ +++GL K  +
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH 323

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
               + +   M   G+ PDI  YN L++ L K   ++ A+K+  Q+  R   P+ +TYN 
Sbjct: 324 AKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNA 383

Query: 599 IICGYCSLN 607
           II   C  N
Sbjct: 384 IISSLCKEN 392


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 247/523 (47%), Gaps = 37/523 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+   +R G++     I + M   G Y + ++   L+     S      YKL + M 
Sbjct: 317 YRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMI 376

Query: 175 G----KGFCVYEFLMNGLLRK---------GVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
                 G+ VY   +  +             ++E A+    +++  G V N V  +   +
Sbjct: 377 KCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAY---SEMLDLGVVLNKVNVSNFAR 433

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  G+   A  +   ++  G  P+  T+S +I   C  +K+EKAF L+  M    +VP
Sbjct: 434 CLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVP 493

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
            +  Y+ILID   KAG +++  +     L +G   +VV +++++ AY+    +  A + +
Sbjct: 494 SVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF 553

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF----GQVLIRRLE------------ 385
           + ML  G  PNV++Y+ LI G C+ G++ +AC ++    G +    ++            
Sbjct: 554 EMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEG 613

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P+++TY +L+DG CK+ ++++   L D M+  G +P+ +V   +I+G      + DA   
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F +       PNL+ +++ +D   +  R    +K+   M   +  P+V+ +T ++ G+  
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G    A  L  +M ++G  P+V+TY+A+I G  K   I   L +F+ M   G AP+   
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           Y VL+N       LD A KL  ++        I+++  II G+
Sbjct: 794 YRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF 836



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/539 (24%), Positives = 234/539 (43%), Gaps = 99/539 (18%)

Query: 119 IENYVR----IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           + N+ R     GK D++ +I   M   G         +++  L D++ V + + L   M+
Sbjct: 428 VSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMK 487

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++   + G+I+ A     +++ +G  PN+VT   ++       Q+ 
Sbjct: 488 RNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMP 547

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM------EMDLV---- 280
            A  LF+++LL G KPNVVT++ LI+  CK  ++EKA Q+Y  M       +MD      
Sbjct: 548 VADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLD 607

Query: 281 ------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
                 P++I Y  L+DGL KA R+KE +ELL T L  G + + +V+ +V+D +  IG +
Sbjct: 608 HNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKL 667

Query: 335 GRAVQTYDRMLNGGF-----------------------------------LPNVISYSIL 359
             A + + +M   G+                                    PNV+ Y+ +
Sbjct: 668 QDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEM 727

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GLC+ G+  EA  L  ++  +   P+++TY+++IDGF KSGK+     L+ +M  +G 
Sbjct: 728 VDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKG- 786

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
                 C+                       PN   +  L++ CC      +  KL   M
Sbjct: 787 ------CA-----------------------PNFITYRVLINHCCSNGLLDEAYKLLDEM 817

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                   +++H  +I G + +    ++I L  ++ +    P    Y  +I    K   +
Sbjct: 818 KQTYWPKHILSHRKIIEGFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRL 875

Query: 540 SVGLHMFKLMERNGVAPDIAI-----YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            V L    L+E    +P  A+     Y  L+  L     +D AL+L+  +  + + P++
Sbjct: 876 EVAL---DLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPEL 931



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/611 (21%), Positives = 252/611 (41%), Gaps = 115/611 (18%)

Query: 96  KTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMS-DMGIYLSP------- 147
           +T+ FFR FR+ L D     S ++E    +   +  V+ F +    +G   +P       
Sbjct: 92  ETHQFFRQFRNQLND-----SLVVEVMNNVKNPELCVKFFLWAGRQIGYSHTPQVFDKLL 146

Query: 148 --------------------------DLVQRLMSCLVDSNSVGQYYKLCRAMRGK----G 177
                                     +L++RL++ LV       ++ +     G+    G
Sbjct: 147 DLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFG 206

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
           +      Y  L+   LR   ++ A+ + R+++   FV +  T +     LC  G+   A 
Sbjct: 207 YKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAF 266

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L D        P+ V ++ +++  C+ +  E+A  + + M     +P+++ Y IL+ G 
Sbjct: 267 DLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGC 324

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G+L     +L   +  G   +  +F+S++ AY    D   A + + +M+  G  P  
Sbjct: 325 LRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGY 384

Query: 354 ISYSILI-----------------------------------------KGLCQQGRLVEA 372
           + Y+I I                                         + LC  G+  +A
Sbjct: 385 LVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQA 444

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN- 431
             +  +++ +   P   TYS +I   C + K+   FSL++ M + G+ P     ++LI+ 
Sbjct: 445 FKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDS 504

Query: 432 ----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
               GL+  A ++F + +     PN+  +  L+    + K+     +LF +M +   KP+
Sbjct: 505 FCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPN 564

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRG------------------LTPDVITYSAI 529
           V+T+T LI G    G +  A  ++ +M  RG                    P+VITY A+
Sbjct: 565 VVTYTALIDGHCKAGQIEKACQIYARM--RGDIESSDMDKYFKLDHNNCEGPNVITYGAL 622

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           + GL K   +     +   M  +G  P+  +Y+ +++   K   L  A ++F ++++RG 
Sbjct: 623 VDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGY 682

Query: 590 EPDIITYNTII 600
            P++ TY++ I
Sbjct: 683 SPNLYTYSSFI 693



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 166/422 (39%), Gaps = 67/422 (15%)

Query: 26  HISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDV 82
           H    Q  +A  I A +      +   ++FK  HN    PN+     L+  L +++    
Sbjct: 575 HCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKE 634

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAY 137
           A  + D M+                    GC+     Y  +I+ + +IGK+ ++ E+F  
Sbjct: 635 AHELLDTMLAH------------------GCEPNQIVYDAVIDGFCKIGKLQDAQEVFTK 676

Query: 138 MSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENA 197
           MS+ G   SP+L                               Y   ++ L +   ++  
Sbjct: 677 MSERG--YSPNLY-----------------------------TYSSFIDCLFKDNRLDLV 705

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
             +  ++++    PN+V   +++  LC  G+   A  L   +   G  PNVVT++ +I+ 
Sbjct: 706 LKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDG 765

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           F K  K+E+  +L+  M      P+ I Y +LI+     G L E  +LL           
Sbjct: 766 FGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKH 825

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           ++    +++ +    +   ++   D +     +P    Y ILI    + GRL  A  L  
Sbjct: 826 ILSHRKIIEGFS--QEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLE 883

Query: 378 QVLIRRLEPSLLT-----YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
           ++      PS        Y+SLI+    + K+     LY +MI + + P+  +   LI G
Sbjct: 884 EI---SSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKG 940

Query: 433 LM 434
           L+
Sbjct: 941 LI 942


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 248/509 (48%), Gaps = 10/509 (1%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G DY  ++    + G +  +      +  +G  L   +   L+      + +G+ +++  
Sbjct: 194 GIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 253

Query: 172 AMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            M  +  C      Y  L++GL   G +E AF + ++++++G  P+  T   ++K  C  
Sbjct: 254 KMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 313

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G    A  + D +      PNV T++ LI+  C+E K+E+A  ++  M++  L P +I +
Sbjct: 314 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 373

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LI+G  K G +    +LL        K ++  ++ +M+    +    +A     R+++
Sbjct: 374 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 433

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G LP+ ++Y+IL+ G C++G+L  A  +F  +    LEP   T+++LIDG CK G+L  
Sbjct: 434 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 493

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLING--LMGDA--LRFFFQS-VRMTLIPNLFIFNTLMD 461
              +  +M+K+G+  D V  + LI+G   +G A  + F F++ V    +     FN  +D
Sbjct: 494 ANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLD 553

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
              +  +  +   +   M  Y + P V+THT+LI G    G  + ++ +  +M + G +P
Sbjct: 554 ALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSP 613

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           +V TY+ II+GL     +     +   M   GV+P+   Y VL+   +K   LD A ++ 
Sbjct: 614 NVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIV 673

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSCL 610
             +   G +P+   Y+ ++ G+   N+ +
Sbjct: 674 STMVKNGCQPNSHIYSALLSGFVLSNTAI 702



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 220/415 (53%), Gaps = 8/415 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF ++R+++  GFV   +    ++  LC NG +  A      +L +G   +    ++L+ 
Sbjct: 178 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 237

Query: 257 AFCKEAKLEKAFQLYNLM-MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           A C+   L +AF+++  M  E +  P+ + YSILI GL +AGRL+E  +L    +++G +
Sbjct: 238 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 297

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
                ++ ++ A   IG   +A++  D M     +PNV +Y+ILI  LC++G++ EA G+
Sbjct: 298 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 357

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F ++L   L P ++T+++LI+G+CK G +   F L   M K   KP+    + L+ GL  
Sbjct: 358 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 417

Query: 434 MGDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           +  + + F    R+    L+P+   +N L+DG C+  +      +F  M    ++PD  T
Sbjct: 418 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFT 477

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLM 549
            T LI G+   G L  A  +   M+K+G++ D +T++A+I G  K GK   V   +F+ M
Sbjct: 478 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF-LFENM 536

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             N        +N  L+ L K+  L+ A  + G++   GL P ++T+  +I G+C
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 591



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 227/535 (42%), Gaps = 73/535 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+   R GKI+E+  +F  M   G  L P ++    L++       V   ++L   
Sbjct: 338 YTILIDRLCREGKIEEANGVFRKMLKHG--LCPGIITFNALINGYCKEGWVVSAFQLLSV 395

Query: 173 MRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           M  KG C      Y  LM GL R      AF + R+V+  G +P+ VT N ++   C  G
Sbjct: 396 ME-KGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEG 454

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           Q+  A ++F+ +   G +P+  TF+ LI+  CK  +LE+A  +   M++  +  D + ++
Sbjct: 455 QLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 514

Query: 288 ILIDGLFKAGRLK-----------------------------------EGNELLLTALDR 312
            LIDG  K G+ K                                   E N +L   +  
Sbjct: 515 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 574

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           GL   VV  + +++ +   G+   +++  +RM   G  PNV +Y+I+I GLC  GR+ EA
Sbjct: 575 GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 634

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             +   +    + P+  TY+ L+    K+G+L   F +   M+K G +P++ + S L++G
Sbjct: 635 ETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 694

Query: 433 LM--------------GDALRFFFQS-----------VRMTLIPNLFIFNTLMDGCCRLK 467
            +              GD       S           ++   +P   ++N L+ G C+  
Sbjct: 695 FVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEG 754

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  +  +L   M  + + PD    ++ I          + +     +L     P   +Y 
Sbjct: 755 RIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYC 813

Query: 528 AIIHGLFKGKNISVGLHMFK-LMERNGVAPDIAIY-NVLLNMLIKECNLDAALKL 580
            +IHGL     +     +   L+   G+  ++ +  ++   M  +E + D  LKL
Sbjct: 814 WVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEEEDDPDKCLKL 868



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 161/367 (43%), Gaps = 32/367 (8%)

Query: 93  QFGKTYNFFRLFR----DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           +  K+Y  F L R    + L      Y+ L++ + + G+++ +  IF  M+  G  L PD
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG--LEPD 474

Query: 149 --LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHR 202
                 L+  L     + Q   +  +M  KG  + E     L++G  + G  ++   +  
Sbjct: 475 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 534

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            +++   +    T N  L  L  + ++  A+++   ++  G  P+VVT + LI   C+  
Sbjct: 535 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 594

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +   + ++   M +    P++  Y+I+I+GL   GR++E   +L +    G+  +   ++
Sbjct: 595 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 654

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL--FGQVL 380
            ++ A+V  G + RA Q    M+  G  PN   YS L+ G       + A  L   G + 
Sbjct: 655 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD 714

Query: 381 IRRLE------------------PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            R L                   P+   Y+ L+ G CK G++ +   L  +M+K GL PD
Sbjct: 715 ARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD 774

Query: 423 AVVCSLL 429
             + S++
Sbjct: 775 KAISSII 781



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 24/307 (7%)

Query: 29  DLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFD 88
           D + N+ANA+L  ++K       +           +   A  + +L +      + +V+ 
Sbjct: 558 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT 617

Query: 89  KMVIQFGKTYNFFRLFRD----SLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMS 139
             +I  G   N      +    S+  FG       Y+ L++ +V+ G++D + +I + M 
Sbjct: 618 YTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 677

Query: 140 DMGIYLSPDLVQRLMSCLVDSNS-VGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAF 198
             G   +  +   L+S  V SN+ +G      RA+   G      L +        EN  
Sbjct: 678 KNGCQPNSHIYSALLSGFVLSNTAIGA-----RALSSTGDLDARSLSSE-------ENDN 725

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
           +     I++  VP     N ++  LC  G+I  A  L   ++  G  P+    S++I  +
Sbjct: 726 NCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA-ISSIIEHY 784

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLKLD 317
           CK  K +   +   L+++   VP    Y  +I GL   GR++E  +L+   +   G++ +
Sbjct: 785 CKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEE 844

Query: 318 VVVFSSV 324
           V V  S+
Sbjct: 845 VEVTPSI 851


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 248/509 (48%), Gaps = 10/509 (1%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G DY  ++    + G +  +      +  +G  L   +   L+      + +G+ +++  
Sbjct: 171 GIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 230

Query: 172 AMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            M  +  C      Y  L++GL   G +E AF + ++++++G  P+  T   ++K  C  
Sbjct: 231 KMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 290

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G    A  + D +      PNV T++ LI+  C+E K+E+A  ++  M++  L P +I +
Sbjct: 291 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 350

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LI+G  K G +    +LL        K ++  ++ +M+    +    +A     R+++
Sbjct: 351 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 410

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G LP+ ++Y+IL+ G C++G+L  A  +F  +    LEP   T+++LIDG CK G+L  
Sbjct: 411 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 470

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLING--LMGDA--LRFFFQS-VRMTLIPNLFIFNTLMD 461
              +  +M+K+G+  D V  + LI+G   +G A  + F F++ V    +     FN  +D
Sbjct: 471 ANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLD 530

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
              +  +  +   +   M  Y + P V+THT+LI G    G  + ++ +  +M + G +P
Sbjct: 531 ALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSP 590

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           +V TY+ II+GL     +     +   M   GV+P+   Y VL+   +K   LD A ++ 
Sbjct: 591 NVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIV 650

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSCL 610
             +   G +P+   Y+ ++ G+   N+ +
Sbjct: 651 STMVKNGCQPNSHIYSALLSGFVLSNTAI 679



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 220/415 (53%), Gaps = 8/415 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF ++R+++  GFV   +    ++  LC NG +  A      +L +G   +    ++L+ 
Sbjct: 155 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 214

Query: 257 AFCKEAKLEKAFQLYNLM-MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           A C+   L +AF+++  M  E +  P+ + YSILI GL +AGRL+E  +L    +++G +
Sbjct: 215 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 274

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
                ++ ++ A   IG   +A++  D M     +PNV +Y+ILI  LC++G++ EA G+
Sbjct: 275 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 334

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F ++L   L P ++T+++LI+G+CK G +   F L   M K   KP+    + L+ GL  
Sbjct: 335 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 394

Query: 434 MGDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           +  + + F    R+    L+P+   +N L+DG C+  +      +F  M    ++PD  T
Sbjct: 395 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFT 454

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLM 549
            T LI G+   G L  A  +   M+K+G++ D +T++A+I G  K GK   V   +F+ M
Sbjct: 455 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF-LFENM 513

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             N        +N  L+ L K+  L+ A  + G++   GL P ++T+  +I G+C
Sbjct: 514 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 568



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/383 (22%), Positives = 161/383 (42%), Gaps = 48/383 (12%)

Query: 93  QFGKTYNFFRLFR----DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           +  K+Y  F L R    + L      Y+ L++ + + G+++ +  IF  M+  G  L PD
Sbjct: 394 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG--LEPD 451

Query: 149 --LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHR 202
                 L+  L     + Q   +  +M  KG  + E     L++G  + G  ++   +  
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 511

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            +++   +    T N  L  L  + ++  A+++   ++  G  P+VVT + LI   C+  
Sbjct: 512 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 571

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +   + ++   M +    P++  Y+I+I+GL   GR++E   +L +    G+  +   ++
Sbjct: 572 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 631

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL--FGQVL 380
            ++ A+V  G + RA Q    M+  G  PN   YS L+ G       + A  L   G + 
Sbjct: 632 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD 691

Query: 381 IRRLE----------------------------------PSLLTYSSLIDGFCKSGKLRD 406
            R L                                   P+   Y+ L+ G CK G++ +
Sbjct: 692 ARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIE 751

Query: 407 GFSLYDNMIKRGLKPDAVVCSLL 429
              L  +M+K GL PD  + S++
Sbjct: 752 ADQLTQDMVKHGLFPDKAISSII 774



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/312 (21%), Positives = 131/312 (41%), Gaps = 18/312 (5%)

Query: 29  DLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFD 88
           D + N+ANA+L  ++K       +           +   A  + +L +      + +V+ 
Sbjct: 535 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT 594

Query: 89  KMVIQFGKTYNFFRLFRD----SLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMS 139
             +I  G   N      +    S+  FG       Y+ L++ +V+ G++D + +I + M 
Sbjct: 595 YTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 654

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA--MRGKGFCVYE----FLMNGLLRKGV 193
             G   +  +   L+S  V SN+      L     +  +     E     L + + R   
Sbjct: 655 KNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMD 714

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +++A  + R  I++  VP     N ++  LC  G+I  A  L   ++  G  P+    S+
Sbjct: 715 VDHALKI-RDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA-ISS 772

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR- 312
           +I  +CK  K +   +   L+++   VP    Y  +I GL   GR++E  +L+   +   
Sbjct: 773 IIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHT 832

Query: 313 GLKLDVVVFSSV 324
           G++ +V V  S+
Sbjct: 833 GIEEEVEVTPSI 844


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 231/500 (46%), Gaps = 45/500 (9%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           ++ N+  IG+++E+V +   M + G+  S   +  ++   ++S  +     +   M  +G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 178 FC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
            C     ++ ++ G  R G I+ A      +IQRGF+P+  TC  IL  LC NG +  A 
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             F  ++ +G KPN++ F++LI+  CK+  +++AF++   M+     P++  ++ LIDGL
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 294 FKAGRLKEGNELLLTALDRGL-KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
            K G  ++   L L  +   + K +V  ++S++  Y     + RA   + RM   G  PN
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 415

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V +Y+ LI G C+ G    A  L   +      P++ TY+++ID  CK  +  + + L +
Sbjct: 416 VNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLN 475

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
                GL+ D V  ++LI        +  AL FF +  +     ++ + N L+   CR K
Sbjct: 476 KAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 535

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  ++ +LF L+    + P   T+T +I G   +G    A+  F  M + G  PD  TY 
Sbjct: 536 KMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYG 595

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           ++I GL K   +                                   D A KL+  + DR
Sbjct: 596 SLISGLCKKSMV-----------------------------------DEACKLYEAMIDR 620

Query: 588 GLEPDIITYNTIICGYCSLN 607
           GL P  +T  T+   YC  N
Sbjct: 621 GLSPPEVTRVTLAYEYCKRN 640



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 243/543 (44%), Gaps = 44/543 (8%)

Query: 58  THNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSF 117
           T NCV        + + ++S + D A +VFD+M +            R    D    +  
Sbjct: 207 TMNCV--------LEIAIESGLIDYAENVFDEMSV------------RGVCPD-SSSFKL 245

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           ++    R GKI E+    + M   G          ++S L ++  V +     R M   G
Sbjct: 246 MVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLG 305

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
           F      +  L++GL +KG I+ AF M  ++++ G+ PN+ T   ++  LC  G    A 
Sbjct: 306 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 365

Query: 234 SLFDVLLLVGP---KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            LF  L LV     KPNV T++++I  +CKE KL +A  L++ M E  L P++  Y+ LI
Sbjct: 366 RLF--LKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 423

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G  KAG      EL+    D G + ++  +++V+D+         A +  ++  + G  
Sbjct: 424 NGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLE 483

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            + ++Y+ILI+  C+Q  + +A   F ++     E  +   + LI  FC+  K+++   L
Sbjct: 484 ADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 543

Query: 411 YDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  ++  GL P     + +I+G    GD   AL++F    R   +P+ F + +L+ G C+
Sbjct: 544 FQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 603

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                +  KL+  M    + P  +T   L      +   +SA+++   + K+     + T
Sbjct: 604 KSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLW---IRT 660

Query: 526 YSAIIHGLFKGKNISVGLHMF-KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
              ++  L   K + V    F KL+E++  A       V L      C+      L   L
Sbjct: 661 VRTLVRKLCSEKKVGVAALFFQKLLEKDSSAD-----RVTLAAFTTACSESGKNNLVADL 715

Query: 585 TDR 587
           T+R
Sbjct: 716 TER 718



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 65/141 (46%)

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  + V + M M    + P  IT   ++      G +  A  +F +M  RG+ PD  ++ 
Sbjct: 185 RLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFK 244

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++ G F+   I         M + G  PD A   ++L+ L +   ++ A+  F ++ D 
Sbjct: 245 LMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDL 304

Query: 588 GLEPDIITYNTIICGYCSLNS 608
           G +P++I + ++I G C   S
Sbjct: 305 GFKPNLINFTSLIDGLCKKGS 325


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 231/461 (50%), Gaps = 21/461 (4%)

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFH----MHRQVIQRGF 209
           +S    SN V     L  ++  +   +  F  N +L   V    +H    + +Q+   G 
Sbjct: 40  ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 99

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PN VT N ++   C  G I  A S+   +L +G +P+++T +T I  FC + ++ +A  
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN 159

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
            ++ ++ +    D + Y  LI+GL K G  +   +LL     + ++L+ V++++V+D   
Sbjct: 160 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMS 219

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
               V  A   Y  M+     P+V++YS LI+G    G+L +A  LF ++++  ++P + 
Sbjct: 220 KDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVY 279

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           T++ L+DGFCK G+L+   ++ D M+ + +KP+    + L++G      M +    F   
Sbjct: 280 TFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMM 339

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           ++  + PN+  + +LMDG C +K+     K+F  M    +  +V ++ ++I G      +
Sbjct: 340 MKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKV 399

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ LF +M  + + PDV+TY+++I GL K   IS    +   M   G  P+I  YN +
Sbjct: 400 DKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSI 459

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           LN L+             +L D+G++P++ T   +I G C 
Sbjct: 460 LNALLT------------KLKDQGIQPNMHTDTILIKGLCQ 488



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 197/363 (54%), Gaps = 11/363 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK- 176
            I+ +   G+I +++     +  +G +L       L++ L          +L R + GK 
Sbjct: 144 FIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKL 203

Query: 177 ---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                 +Y  +++G+ +   + +AF ++ +++ +   P++VT + +++   I G++ +A 
Sbjct: 204 VQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAI 263

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            LF+ ++L   KP+V TF+ L++ FCKE +L+KA  + ++MM  D+ P++  ++ L+DG 
Sbjct: 264 DLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGF 323

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K  ++KEG  +    + +G+K +VV + S+MD Y  +  V +A + ++ M   G   NV
Sbjct: 324 CKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANV 383

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            SY+I+I G C+  ++ +A  LF ++  + + P ++TY+SLIDG CKSGK+   F L + 
Sbjct: 384 HSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNE 443

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           M  RG  P+ +  + ++N L+    +   Q ++    PN+     L+ G C+  +     
Sbjct: 444 MHDRGQPPNIITYNSILNALLT---KLKDQGIQ----PNMHTDTILIKGLCQSGKLEAAR 496

Query: 474 KLF 476
           K+F
Sbjct: 497 KVF 499



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/505 (24%), Positives = 241/505 (47%), Gaps = 84/505 (16%)

Query: 90  MVIQFGKTYNFFRLFRDSLGDFGCDYSFLI---ENYVRIGKI---------DESVEIFAY 137
           ++  F K++N F   +  +       SFLI   +N++    I         D +V +F  
Sbjct: 4   LITLFQKSFNLFNFLKIPIS-----ISFLILLQKNFIPYSSISTTFHSNDVDGAVSLFNS 58

Query: 138 MSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGV 193
           +      L+     +++  LV S        L + M  +G    F  +  L+N   + G+
Sbjct: 59  LLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGL 118

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           I  AF +  ++++ G+ P+I+T N  +K  C+ GQI  A +  D L+ +G   + V++ T
Sbjct: 119 IPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGT 178

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LIN  CK  +   A QL   +    +  + ++Y+ +IDG+ K   + +  +L    + + 
Sbjct: 179 LINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKR 238

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  DVV +S+++  +  +G +  A+  +++M+     P+V +++IL+ G C++GRL +A 
Sbjct: 239 ISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAK 298

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV-CSLL--- 429
            +   ++I+ ++P++ T+++L+DGFCK  K+++G +++  M+K+G+KP+ V  CSL+   
Sbjct: 299 NVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 358

Query: 430 -------------------------------INGL-----MGDALRFFFQSVRMTLIPNL 453
                                          ING      +  A++ F +     +IP++
Sbjct: 359 CLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDV 418

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMG---------MYN--------------IKPDVIT 490
             +N+L+DG C+  + +   +L   M           YN              I+P++ T
Sbjct: 419 VTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHT 478

Query: 491 HTVLIRGIASQGSLSSAILLFFQML 515
            T+LI+G+   G L +A  +F  +L
Sbjct: 479 DTILIKGLCQSGKLEAARKVFEDLL 503



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 180/380 (47%), Gaps = 34/380 (8%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A SLF+ LL   P      F+ ++ +  K         L   M    + P+ + ++I
Sbjct: 49  VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNI 108

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+   + G +     +L   L  G + D++  ++ +  +   G + +A+  +D+++  G
Sbjct: 109 LINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALG 168

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F  + +SY  LI GLC+ G    A  L  +V  + ++ + + Y+++IDG  K   + D F
Sbjct: 169 FHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAF 228

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            LY  M+ + + PD V  S LI G       FF                        + +
Sbjct: 229 DLYSEMVAKRISPDVVTYSALIRG-------FFI-----------------------VGK 258

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             D + LF  M + NIKPDV T  +L+ G   +G L  A  +   M+ + + P+V T++ 
Sbjct: 259 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNT 318

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN--MLIKECNLDAALKLFGQLTD 586
           ++ G  K + +  G  +F +M + G+ P++  Y  L++   L+K+ N   A K+F  ++ 
Sbjct: 319 LVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVN--KAKKIFNTMSQ 376

Query: 587 RGLEPDIITYNTIICGYCSL 606
           RG+  ++ +YN +I G+C +
Sbjct: 377 RGVTANVHSYNIMINGFCKI 396



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 142/281 (50%), Gaps = 34/281 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  +  +GK+ +++++F  M    I   PD+     + LVD      + K  R  +
Sbjct: 246 YSALIRGFFIVGKLKDAIDLFNKMILENI--KPDVYT--FNILVDG-----FCKEGRLKK 296

Query: 175 GKGF-------------CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
            K                 +  L++G  +   ++    +   ++++G  PN+VT   ++ 
Sbjct: 297 AKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMD 356

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
             C+  Q+  A  +F+ +   G   NV +++ +IN FCK  K++KA +L+  M    ++P
Sbjct: 357 GYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIP 416

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D++ Y+ LIDGL K+G++    +L+    DRG   +++ ++S+++A +            
Sbjct: 417 DVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALL------------ 464

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            ++ + G  PN+ + +ILIKGLCQ G+L  A  +F  +L++
Sbjct: 465 TKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 213/398 (53%), Gaps = 12/398 (3%)

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           ++++CN +L  L    + G    ++  ++     PN++TF+T+IN  CK  KL KA  + 
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGR---LKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           + M      P+++ Y+ LIDG  K GR   + + + +L   ++  +  + V F+ ++D +
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
               ++  A++ ++ M + G  P V++Y+ L+ GLC +G+L EA  L  ++L   L+P++
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +TY++LI+G+CK   L +   L+DN+ K+GL P+ +  + L++G      M +A  F  Q
Sbjct: 374 ITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEA--FLLQ 431

Query: 444 SVRMT--LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            V +    +PN   +N L+ G CR  +  +   L   M    +K D +T+ +LI     +
Sbjct: 432 KVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEK 491

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
                A  L  +ML +GL P  +TY+ +++G     N+   L++ K ME+ G   ++  Y
Sbjct: 492 KEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTY 551

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           NVL+    ++  L+ A  L  ++ ++GL P+  TY  I
Sbjct: 552 NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 188/368 (51%), Gaps = 8/368 (2%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           K +V++ + L++A  KE +      +Y  M+   + P+LI ++ +I+GL K G+L +  +
Sbjct: 192 KLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGD 251

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR---AVQTYDRMLNGGFLPNVISYSILIK 361
           ++      G   +VV +++++D Y  +G VG+   A      M+     PN +++++LI 
Sbjct: 252 VVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLID 311

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C+   L  A  +F ++  + L+P+++TY+SL++G C  GKL +   L D M+   LKP
Sbjct: 312 GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371

Query: 422 DAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           + +  + LING     L+ +A   F    +  L PN+  FNTL+ G C+  +  +   L 
Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQ 431

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
            +M      P+  T+  LI G   +G +     L  +M  RG+  D +TY+ +I    + 
Sbjct: 432 KVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEK 491

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
           K       +   M   G+ P    YN+LLN    E NL AAL L  Q+   G   +++TY
Sbjct: 492 KEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTY 551

Query: 597 NTIICGYC 604
           N +I GYC
Sbjct: 552 NVLIQGYC 559



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 199/415 (47%), Gaps = 58/415 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I    ++GK++++ ++   M   G +  P++V    + L+D               
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWGFW--PNVVT--YNTLID--------------- 273

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
             G+C        + R G +  A  + +++++    PN VT N ++   C +  +  A  
Sbjct: 274 --GYC-------KMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALK 324

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F+ +   G KP VVT+++L+N  C E KL +A  L + M+  +L P++I Y+ LI+G  
Sbjct: 325 VFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYC 384

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K   L+E  EL      +GL  +V+ F++++  Y   G +  A      ML  GFLPN  
Sbjct: 385 KKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAS 444

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI G C++G++ E   L  ++  R ++   +TY+ LI  +C+  + +    L D M
Sbjct: 445 TYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEM 504

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + +GLKP  +  ++L+NG                           M+G   L+ A +  K
Sbjct: 505 LDKGLKPSHLTYNILLNGY-------------------------CMEG--NLRAALNLRK 537

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
                G +    +V+T+ VLI+G   +G L  A  L  +ML++GL P+  TY  I
Sbjct: 538 QMEKEGRW---ANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 172/327 (52%), Gaps = 7/327 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDM-GIYLSPDLV--QRLMSCLVDSNSVGQYYKLCR 171
           Y+ LI+ Y ++G++ +  +  A + +M    +SP+ V    L+       ++    K+  
Sbjct: 268 YNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFE 327

Query: 172 AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            M+ +G       Y  L+NGL  +G +  A  +  +++     PN++T N ++   C   
Sbjct: 328 EMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKK 387

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            +  A  LFD +   G  PNV+TF+TL++ +CK  K+E+AF L  +M+E   +P+   Y+
Sbjct: 388 LLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYN 447

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI G  + G+++E   LL     RG+K D V ++ ++ A+    +  +A +  D ML+ 
Sbjct: 448 CLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDK 507

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+ ++Y+IL+ G C +G L  A  L  Q+       +++TY+ LI G+C+ GKL D 
Sbjct: 508 GLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDA 567

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLM 434
             L + M+++GL P+     ++   +M
Sbjct: 568 NGLLNEMLEKGLIPNRTTYEIIKEEMM 594



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 162/321 (50%), Gaps = 27/321 (8%)

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           II  +L+    +  +   G E    A D   KL V+  + ++ A V   + G     Y  
Sbjct: 161 IIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKE 220

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+     PN+I+++ +I GLC+ G+L +A  +   + +    P+++TY++LIDG+CK G+
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
                      + +  K DA++  ++ N +                 PN   FN L+DG 
Sbjct: 281 -----------VGKMYKADAILKEMVENKVS----------------PNSVTFNVLIDGF 313

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+ +  +  +K+F  M    +KP V+T+  L+ G+ ++G L+ A +L  +ML   L P+V
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           ITY+A+I+G  K K +     +F  + + G+ P++  +N LL+   K   ++ A  L   
Sbjct: 374 ITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKV 433

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           + ++G  P+  TYN +I G+C
Sbjct: 434 MLEKGFLPNASTYNCLIVGFC 454



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 132/267 (49%), Gaps = 8/267 (2%)

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           +G F  N I   +L+    +  + V     F +    R + S+L+ + L+    K  +  
Sbjct: 153 SGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFG 212

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
               +Y  MI+R + P+ +  + +INGL     +  A             PN+  +NTL+
Sbjct: 213 GVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLI 272

Query: 461 DGCCRLKRATDTVK---LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           DG C++ R     K   +   M    + P+ +T  VLI G     +LS+A+ +F +M  +
Sbjct: 273 DGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQ 332

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           GL P V+TY+++++GL     ++    +   M  + + P++  YN L+N   K+  L+ A
Sbjct: 333 GLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEA 392

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
            +LF  +  +GL P++IT+NT++ GYC
Sbjct: 393 RELFDNIGKQGLTPNVITFNTLLHGYC 419



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 125/260 (48%), Gaps = 31/260 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  Y +   ++E+ E+F  +   G  L+P+++                        
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQG--LTPNVI------------------------ 409

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 +  L++G  + G +E AF + + ++++GF+PN  T N ++   C  G++    +
Sbjct: 410 -----TFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKN 464

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G K + VT++ LI+A+C++ + +KA +L + M++  L P  + Y+IL++G  
Sbjct: 465 LLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYC 524

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             G L+    L       G   +VV ++ ++  Y   G +  A    + ML  G +PN  
Sbjct: 525 MEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRT 584

Query: 355 SYSILIKGLCQQGRLVEACG 374
           +Y I+ + + ++G L +  G
Sbjct: 585 TYEIIKEEMMEKGFLPDIEG 604



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 5/126 (3%)

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK----GKNI 539
           I P++IT   +I G+   G L+ A  +   M   G  P+V+TY+ +I G  K    GK  
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                + K M  N V+P+   +NVL++   K+ NL AALK+F ++  +GL+P ++TYN++
Sbjct: 286 KADA-ILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSL 344

Query: 600 ICGYCS 605
           + G C+
Sbjct: 345 VNGLCN 350



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 45/84 (53%)

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V++ + ++  L K         ++K M R  ++P++  +N ++N L K   L+ A  +  
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254

Query: 583 QLTDRGLEPDIITYNTIICGYCSL 606
            +   G  P+++TYNT+I GYC +
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKM 278


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 216/430 (50%), Gaps = 14/430 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+ GL + G +  A   + Q+++R  VPN+   N +L  LC  G +  A ++F  +
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI 64

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME-MDLVPDLIIYSILIDGLFKAGR 298
                 P+V+T + LIN FC+   L+KA +L++ M +   LVP+   Y+ +I    K  R
Sbjct: 65  QC---SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY-DRMLNGGFLPNVISYS 357
           L +  +LL  +       DV+  +SV   +     V  A Q   D +      P++++++
Sbjct: 122 LDQARQLLEES--SCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWN 179

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           ++I G C+ GR+ EA  +   ++     P+ +TY++LIDGFCKSG L +   L+  +  R
Sbjct: 180 VIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239

Query: 418 G--LKPDAVVCSLLINGLM-GDALRFFFQSVRM----TLIPNLFIFNTLMDGCCRLKRAT 470
               +P+ V  + LI+GL   D L   F+ V+      L  + F + TLMDG C+  R +
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  ++F  M      P V+T+T L+      GSL  A  +   M+ +G+ PDV TY+ ++
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GLF+   +      F+ + R    P   +Y+ L+    K   +D A+K + ++ DR L 
Sbjct: 360 EGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLA 419

Query: 591 PDIITYNTII 600
           PD  T   ++
Sbjct: 420 PDPATCKLLV 429



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 188/407 (46%), Gaps = 25/407 (6%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG 95
           N +LA+L +      A+  F+      S   +  LI+   +  + D A  +F +M   F 
Sbjct: 42  NLLLASLCQAGTMDQAMAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNF- 100

Query: 96  KTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RL 153
                      +L      Y+ +I+ Y ++ ++D++ ++    S      S D++    +
Sbjct: 101 -----------ALVPEATTYTAIIKCYCKMDRLDQARQLLEESS----CCSSDVIAITSV 145

Query: 154 MSCLVDSNSVGQYYKLCRAMRGK-----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
                 +  V + Y+L   M  K         +  +++G  + G +  A+ M   ++  G
Sbjct: 146 ARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMG 205

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG--PKPNVVTFSTLINAFCKEAKLEK 266
            VPN VT   ++   C +G +  A  LF VL       +PNVVTF+ LI+  CK  +LE 
Sbjct: 206 CVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEH 265

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           AF+L   M   DL  D   Y+ L+DGL K GR  E + +    L  G    VV +++++ 
Sbjct: 266 AFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVH 325

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A+   G +  A Q    M+  G  P+V +Y++L++GL + G++  A   F ++L  R  P
Sbjct: 326 AHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             + YS+L+ G CK+  + +    Y  M+ R L PD   C LL+  L
Sbjct: 386 CAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEML 432



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 137/292 (46%), Gaps = 35/292 (11%)

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFA 136
           VA +V      + G+    + +  ++L   GC      Y+ LI+ + + G + E++++F 
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEML-ETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIEN 196
            +S    +  P++V                              +  L++GL +   +E+
Sbjct: 235 VLSSRDHHAEPNVV-----------------------------TFNALISGLCKADRLEH 265

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF + +Q+  R    +  T   ++  LC  G+    S +F+ +L  G  P+VVT++TL++
Sbjct: 266 AFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVH 325

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           A CK   L+ A Q+   M+   + PD+  Y++L++GLF+ G+++   E     L      
Sbjct: 326 AHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
             VV+S+++        V  AV+ Y  ML+    P+  +  +L++ LC++GR
Sbjct: 386 CAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 246/512 (48%), Gaps = 11/512 (2%)

Query: 113 CDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC 170
           C Y++  +I  Y   GK DE+  +       G   S      +++CL     V +  ++ 
Sbjct: 89  CAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIF 148

Query: 171 RAMRGKGFC---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
             M+         Y  L++ L R+G +  A  +   + + G  PN++T N ++ RLC   
Sbjct: 149 EEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQ 208

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A S+F+ +      PN VTFS+LI+   K  +++ A+ LY  M++   VP  I+Y+
Sbjct: 209 KLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYT 268

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI   FK GR ++G+++    +  G   D+ + ++ MD     G+  +    +  +   
Sbjct: 269 SLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAH 328

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GF+P+  SYSILI GL + G   E   LF  +  +        Y+++IDGFCKSGK+   
Sbjct: 329 GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKA 388

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           + L + M  +G  P  V    +I+GL     + +A   F ++    +  N+ ++++L+DG
Sbjct: 389 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 448

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             ++ R  +   +   +    + P+V T   L+  +     ++ A++ F  M      P+
Sbjct: 449 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPN 508

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            ITYS +I+GL + +  +     ++ M++ G+ P+   Y  +++ L K  N+  A  LF 
Sbjct: 509 QITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFS 568

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSCLIDGY 614
           +    G  PD  +YN +I G  S N  + D Y
Sbjct: 569 RFKANGGIPDSASYNAMIEGLSSANKAM-DAY 599



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 241/490 (49%), Gaps = 13/490 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  + RD++ +    Y+ LI+   R GK++ ++EI   M   G++ +   V  ++  L  
Sbjct: 148 FEEMKRDAVPNVP-TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCK 206

Query: 160 SNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
           +  + +   +   M  K        +  L++GL + G +++A+ ++ +++  G VP  + 
Sbjct: 207 AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 266

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
              +++     G+  +   ++  ++  G  P++   +T ++   K  + EK   L+  + 
Sbjct: 267 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 326

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
               +PD   YSILI GL KAG   E  EL     ++G  LD   +++V+D +   G V 
Sbjct: 327 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 386

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           +A Q  + M   G  P V++Y  +I GL +  RL EA  LF +     ++ +++ YSSLI
Sbjct: 387 KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 446

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR-MTL 449
           DGF K G++ + + + + ++++GL P+    + L++ L     + +AL   FQS++ +  
Sbjct: 447 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL-ICFQSMKDLKC 505

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            PN   ++ L++G CR+++       +  M    +KP+ IT+T +I G+A  G++  A  
Sbjct: 506 PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG 565

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF +    G  PD  +Y+A+I GL           +F+     G         VLL+ L 
Sbjct: 566 LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALH 625

Query: 570 K-ECNLDAAL 578
           K EC   AA+
Sbjct: 626 KAECLEQAAI 635



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 186/386 (48%), Gaps = 6/386 (1%)

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC   ++  A  LF+ L      P    ++T+I  +    K ++A+ L         +P 
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           +I Y+ ++  L K  R++E    +   + R    +V  ++ ++D     G +  A++  D
Sbjct: 125 VIAYNCILTCLGKKRRVEEALR-IFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRD 183

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M   G  PNV++ +I+I  LC+  +L EAC +F  +  +   P+ +T+SSLIDG  K G
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFN 457
           ++ D +SLY+ M+  G  P A+V + LI      G   D  + + + V     P+L + N
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           T MD   +         LF  +  +   PD  ++++LI G+   G  +    LF+ M ++
Sbjct: 304 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 363

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G   D   Y+A+I G  K   ++    + + M+  G  P +  Y  +++ L K   LD A
Sbjct: 364 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 423

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGY 603
             LF +    G++ +++ Y+++I G+
Sbjct: 424 YMLFEEAKSNGIKLNVVVYSSLIDGF 449



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 174/380 (45%), Gaps = 24/380 (6%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG---------- 292
           GP  N+     L+    K  KL +AF +   M +    P    Y+ILI            
Sbjct: 7   GPSSNISI--ELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY---DRMLNGGF 349
           L KA RL E  E L   L++  K+      + M   +G G  G+  + Y   +R    G 
Sbjct: 65  LCKANRLDEAVE-LFEQLEQNRKVPCAYAYNTM--IMGYGSAGKFDEAYGLLERQKAKGS 121

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           +P+VI+Y+ ++  L ++ R+ EA  +F + + R   P++ TY+ LID  C+ GKL     
Sbjct: 122 IPSVIAYNCILTCLGKKRRVEEALRIFEE-MKRDAVPNVPTYNILIDMLCREGKLNAALE 180

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           + D+M + GL P+ +  +++I+ L     + +A   F         PN   F++L+DG  
Sbjct: 181 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 240

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  R  D   L+  M      P  I +T LIR     G       ++ +M+  G +PD+ 
Sbjct: 241 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 300

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
             +  +  +FK      G  +F+ +  +G  PD   Y++L++ L+K    +   +LF  +
Sbjct: 301 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 360

Query: 585 TDRGLEPDIITYNTIICGYC 604
            ++G   D   YN +I G+C
Sbjct: 361 KEQGCVLDTHAYNAVIDGFC 380


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 244/520 (46%), Gaps = 31/520 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+  +++  ++     I   M   G   +P L   L+    ++      YKL + M 
Sbjct: 145 YRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMA 204

Query: 175 G----KGFCVYEFLMNG------LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                 G+  Y   +        L    ++  A  ++ +++    V N V      + LC
Sbjct: 205 DCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLC 264

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   A  +  V++  G  P+  T+S +I   C+  K+EKAF L+  M  + + PD+ 
Sbjct: 265 GMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVY 324

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ILID   KAG +++           G   +VV +++++ AY+    + +A   ++RM
Sbjct: 325 TYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRM 384

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL----------------IRRLEPSL 388
           ++ G  PN I+YS L+ GLC+ G + +AC ++ +++                   + P++
Sbjct: 385 IDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNV 444

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +TY +LIDG CK+ K+ D   L D M+  G +P+ ++   LI+G      + +A   F +
Sbjct: 445 VTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLR 504

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
             +   +P +  + +L+D   + +R    +K+   M   +  P+V+T+T +I G+   G 
Sbjct: 505 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGE 564

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A+ L   M ++G +P+V+TY+A+I GL K   + + L +F  M   G AP+   Y V
Sbjct: 565 CQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRV 624

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           L+N       LD A  L  ++        +  Y +++ G+
Sbjct: 625 LINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF 664



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/534 (22%), Positives = 238/534 (44%), Gaps = 65/534 (12%)

Query: 121 NYVR----IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
           N+ R    +GK D + +I   M   G         ++++ L ++  V + + L + M+  
Sbjct: 258 NFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV 317

Query: 177 GF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G       Y  L++   + G+IE A     ++   G   N+VT   +L       Q+  A
Sbjct: 318 GVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQA 377

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD-------------- 278
           S +F+ ++  G  PN +T+S L++  CK  +++KA ++Y  ++                 
Sbjct: 378 SDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHT 437

Query: 279 --LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             + P+++ Y  LIDGL KA ++ +  ELL   L  G + + +++ +++D +  +G +  
Sbjct: 438 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDN 497

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A + + RM   G+LP V +Y+ LI  + +  RL  A  +  Q++     P+++TY+++ID
Sbjct: 498 AQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMID 557

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIP 451
           G C+ G+ +    L   M ++G  P+ V  + LI+GL        +L+ F Q       P
Sbjct: 558 GLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAP 617

Query: 452 NLFIFNTLMDGCCRL---------------------------------KRATDTVKLFML 478
           N   +  L++ CC                                   K+   ++ L   
Sbjct: 618 NYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEE 677

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT---YSAIIHGLFK 535
           +  +   P    + +LI   +  G L  A+ L  +M++   + ++ +   Y+++I  L  
Sbjct: 678 LESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCL 737

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
              +     ++  + R GV P+++++  L+  LIK    + AL+L   + D G+
Sbjct: 738 ASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/569 (23%), Positives = 240/569 (42%), Gaps = 49/569 (8%)

Query: 75  LQSDMRDV---ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDES 131
           L+S +R     +SH  D  +  FG        +R S    G  Y+ L++     G++D  
Sbjct: 12  LRSSLRRACSSSSHTADPELKDFG--------YRPS----GATYNALVQVLATAGQMDMG 59

Query: 132 VEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFL----MNG 187
             +   MS+ G  +    V      L      G++      +  + F +   L    ++G
Sbjct: 60  FRVQKEMSESGFCMDKFTVGCFAQALCKE---GRWSDALVMIEREDFKLDTVLCTQMISG 116

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L+   + + A     ++     +PN+VT   +L       Q+G    + ++++  G  PN
Sbjct: 117 LMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPN 176

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
              F++L++++C       A++L   M +    P  + Y+I I  +     L   + L L
Sbjct: 177 PSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLAL 236

Query: 308 TA------LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
                   L     L+ V  ++      G+G    A Q    M+  GF+P+  +YS +I 
Sbjct: 237 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVIT 296

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
            LC+  ++ +A  LF ++    + P + TY+ LID FCK+G +    S +D M   G   
Sbjct: 297 FLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSA 356

Query: 422 DAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           + V  + L++  +       A   F + +     PN   ++ L+DG C+        +++
Sbjct: 357 NVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVY 416

Query: 477 M-LMGMYN---------------IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
             L+G  +               I P+V+T+  LI G+     +  A  L   ML  G  
Sbjct: 417 TKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCE 476

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+ I Y A+I G  K   I     +F  M + G  P +  Y  L++ + K+  LD A+K+
Sbjct: 477 PNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKV 536

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             Q+ +    P+++TY  +I G C +  C
Sbjct: 537 LSQMVESSCTPNVVTYTAMIDGLCRIGEC 565



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 102/212 (48%), Gaps = 19/212 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+   + GK+D S+++F  MS  G   +P+ V  + L++    +  + + + L   
Sbjct: 587 YTALIDGLGKSGKVDLSLQLFIQMSTKGC--APNYVTYRVLINHCCAAGLLDEAHSLLSE 644

Query: 173 MRG-------KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
           M+        +G+C    ++ G  +K +   +  +  ++   G VP       ++     
Sbjct: 645 MKQTYWPKYLQGYCS---VVQGFSKKFIA--SLGLLEELESHGTVPIAPVYGLLIDNFSK 699

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVT---FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
            G++  A  L   ++ +    N+ +   +++LI A C  ++LEKAF+LY+ +    +VP+
Sbjct: 700 AGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPE 759

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           L ++  LI GL K  +  E  +L  +  D G+
Sbjct: 760 LSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 204/406 (50%), Gaps = 9/406 (2%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +++ G+ P+  T N ++   C   Q+  A  LFD + L G   +VV+++TLI   C+  +
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +++A +L+    EMD  PD+ +Y+ L+ GL  A R +EG  +L    + G +     +++
Sbjct: 61  IDEAVELFG---EMDQ-PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           V+D          A +    M   G  P V++ + +I   C++GR+ +A  +   + +R 
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA-LRFFF 442
            +P++ TY++L+ GFC  GK+    +L + M   G+ PDAV  +LLI G   D  +   F
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 443 QSVRMT----LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           + +R+     LI + + +N L++  C+  R      LF  +    IKP+ +T   LI G+
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G    A     +M+  G TPD  TYS+ I  L K K    GL     M +  V P  
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             Y ++++ L+KE N     + +G++   G  PD++TY T +  YC
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYC 402



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/555 (24%), Positives = 249/555 (44%), Gaps = 43/555 (7%)

Query: 76  QSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIF 135
           +++  DVA  +FDKM +         R F   +      Y+ LIE     G+IDE+VE+F
Sbjct: 22  RTNQVDVARDLFDKMPL---------RGFAQDV----VSYATLIEGLCEAGRIDEAVELF 68

Query: 136 AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRK 191
             M    +++   LV+ L  C  +    G    + R M+  G+      Y  +++   R+
Sbjct: 69  GEMDQPDMHMYAALVKGL--CNAERGEEGLL--MLRRMKELGWRPSTRAYAAVVDFRCRE 124

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
              + A  M +++ ++G  P +VTC  ++   C  G++ +A  + +++ L G KPNV T+
Sbjct: 125 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 184

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + L+  FC E K+ KA  L N M    + PD + Y++LI G    G ++    LL     
Sbjct: 185 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 244

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            GL  D   ++++++A    G   +A   +D +   G  PN ++++ LI GLC+ G+   
Sbjct: 245 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 304

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A     +++     P   TYSS I+  CK    ++G S    M+++ +KP  V  +++I+
Sbjct: 305 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 364

Query: 432 GLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
            L+     G   R + + V     P++  + T M   C   R  +   + M M    +  
Sbjct: 365 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 424

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH--------------- 531
           D + +  L+ G AS G    A+ +  QM      P+  TY  ++                
Sbjct: 425 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 484

Query: 532 --GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
             G++K   ++    +F +M++N   P+   Y+ +L    ++   + A  L   + +  +
Sbjct: 485 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 544

Query: 590 EPDIITYNTIICGYC 604
             +   Y  ++  +C
Sbjct: 545 SLNEDIYTALVTCFC 559



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 151/330 (45%), Gaps = 36/330 (10%)

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G + D   F+S++  Y     V  A   +D+M   GF  +V+SY+ LI+GLC+ GR+ EA
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64

Query: 373 CGLFGQV--------------------------LIRRLE-----PSLLTYSSLIDGFCKS 401
             LFG++                          ++RR++     PS   Y++++D  C+ 
Sbjct: 65  VELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRE 124

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIF 456
            K ++   +   M ++GL P  V C+ +IN     G M DALR           PN++ +
Sbjct: 125 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 184

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N L+ G C   +    + L   M    + PD +T+ +LIRG    G + SA  L   M  
Sbjct: 185 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 244

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            GL  D  TY+A+I+ L K         +F  +E  G+ P+   +N L+N L K    D 
Sbjct: 245 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 304

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           A K   ++   G  PD  TY++ I   C +
Sbjct: 305 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 334



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/507 (22%), Positives = 212/507 (41%), Gaps = 26/507 (5%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + +I  Y + G++ +++ +   M   G   +      L+    +   V +   L   MR 
Sbjct: 150 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 209

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            G       Y  L+ G    G IE+AF + R +   G + +  T N ++  LC +G+   
Sbjct: 210 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 269

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A SLFD L   G KPN VTF++LIN  CK  K + A++    M+     PD   YS  I+
Sbjct: 270 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIE 329

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K    +EG   +   L + +K   V ++ V+   +   + G   +T+  M++ G  P
Sbjct: 330 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 389

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V++Y+  ++  C +GRL EA  +  ++    +    + Y++L+DG    G+     S+ 
Sbjct: 390 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 449

Query: 412 DNMIKRGLKPDAVVCSLLINGL----------------------MGDALRFFFQSVRMTL 449
             M      P+     +L+  L                      + D    F    +   
Sbjct: 450 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 509

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
           +PN   ++++++G     R  +   L  LM   +I  +   +T L+           A +
Sbjct: 510 LPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWV 569

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           L   M++ G  P +++Y  ++ GL           +F        +PD  ++ V+++ LI
Sbjct: 570 LVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLI 629

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITY 596
           K+ + D + ++   L      P   TY
Sbjct: 630 KKGHSDISREMIIMLERMNCRPSHQTY 656



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 18/251 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ +  IG+ D +V I   M+ +    +      L+  LV    V     L  A  
Sbjct: 429 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA-- 486

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                       G+ +   + + F +   + +  F+PN  T + IL+    +G+   A+S
Sbjct: 487 ------------GVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATS 534

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L  ++       N   ++ L+  FCK  +   A+ L   M++   +P L+ Y  L+ GL 
Sbjct: 535 LVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLI 594

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV--GIGDVGRAVQTYDRMLNGGFLPN 352
             G+  +  E+ + +  +    D +V+  ++D  +  G  D+ R +      +N    P+
Sbjct: 595 CEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMN--CRPS 652

Query: 353 VISYSILIKGL 363
             +Y++L + L
Sbjct: 653 HQTYAMLTEEL 663


>gi|255574125|ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532604|gb|EEF34390.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 621

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 220/427 (51%), Gaps = 7/427 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +  L+  L   G +  A  + R+++ +GFVP+I+T N ++  LC +G +  A  L   +L
Sbjct: 128 HASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEML 187

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +GP PN  TF+T I  +C    ++KA  L++ M +  + P+ +  +IL+  L K G L+
Sbjct: 188 EIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLE 247

Query: 301 EGNELLLTALDRGLKLDVVVFSS--VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +  +LL   LD   K  V + +S  +MD  +  GD+ +A+  +  M     L + ++Y++
Sbjct: 248 DAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNV 307

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI G C    +  A      +L R L P + TY++LI G CK+GKL +   ++D M++ G
Sbjct: 308 LIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMG 367

Query: 419 LKPDAVVCSLLINGL--MGDALR---FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           + PD +   ++I GL   GD L+        +  +++P   ++N ++DG  R   + +  
Sbjct: 368 VAPDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAF 427

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +   M  + + P+V T+  LI      G++  A  L   ML  GL PDVITY+ +I   
Sbjct: 428 SIRDQMLSFGVVPNVFTYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTA 487

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
                IS+ + ++  M R+G  PDI  Y  L+  L    N+  A +LF +L + GL  D 
Sbjct: 488 CNAGRISIAVQLYYEMLRSGHEPDIITYTELIRGLCMRGNMKEAKELFAKLQNTGLTVDH 547

Query: 594 ITYNTII 600
           + +  +I
Sbjct: 548 VPFQLLI 554



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 243/506 (48%), Gaps = 26/506 (5%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDS--LGD-------FGCDYSFLIENYVRIGKIDESVE 133
           AS+ FD MV       N  RL RD+  L D       F    + L  +  R+  + ES+ 
Sbjct: 52  ASYFFDDMVKTLS---NRCRLRRDNKNLNDEDDPQVVFNVLDAMLKGSLERLKSMRESIG 108

Query: 134 IFAY---MSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMN 186
           I +    ++   + +S      L+  L  +  +G    L R +  KGF      + FL+N
Sbjct: 109 ISSVKVGLAGRSVDVSYAGHASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVN 168

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           GL   G ++ A  + +++++ G  PN  T N  +K  C+   +  A  LF  +   G KP
Sbjct: 169 GLCNSGDLQKADCLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKP 228

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP--DLIIYSILIDGLFKAGRLKEGNE 304
           N VT + L++A CK   LE A +L   +++ +     +LI  +IL+DG  K G + +   
Sbjct: 229 NRVTLNILVHALCKRGLLEDAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALG 288

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +          +D V ++ ++  +    ++  A      ML  G LP++ +Y+ LI GLC
Sbjct: 289 IWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLC 348

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + G+L EAC +   +L   + P  ++Y  +I G C  G +         M+++ + P+A 
Sbjct: 349 KAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVPEAH 408

Query: 425 VCSLLINGLM--GDALRFFF---QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           V +L+I+G    GD+   F    Q +   ++PN+F +N L+    +     D   L  +M
Sbjct: 409 VWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYNALIHAQVKTGNIVDAYSLKKMM 468

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
             + + PDVIT+ +LI    + G +S A+ L+++ML+ G  PD+ITY+ +I GL    N+
Sbjct: 469 LCHGLFPDVITYNLLIGTACNAGRISIAVQLYYEMLRSGHEPDIITYTELIRGLCMRGNM 528

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLL 565
                +F  ++  G+  D   + +L+
Sbjct: 529 KEAKELFAKLQNTGLTVDHVPFQLLI 554



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 195/395 (49%), Gaps = 42/395 (10%)

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           ++L+   C   KL  A  L   ++    VPD++ ++ L++GL  +G L++ + L+   L+
Sbjct: 129 ASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLE 188

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G   +   F++ +  Y  + +V +A+  +  M + G  PN ++ +IL+  LC++G L +
Sbjct: 189 IGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLED 248

Query: 372 ACGLFGQVLI--RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
           A  L G++L    +   +L+T + L+DG  K+G +     ++  M +     D+V  ++L
Sbjct: 249 AKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNVL 308

Query: 430 INGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I+G      M  A  +    ++  L+P++F +NTL+ G C+  +  +   +  +M    +
Sbjct: 309 IHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGV 368

Query: 485 KPDVITHTVLIRGIASQGSL-----------------------------------SSAIL 509
            PD I++ ++I+G+ ++G +                                   ++A  
Sbjct: 369 APDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFS 428

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           +  QML  G+ P+V TY+A+IH   K  NI     + K+M  +G+ PD+  YN+L+    
Sbjct: 429 IRDQMLSFGVVPNVFTYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTAC 488

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
               +  A++L+ ++   G EPDIITY  +I G C
Sbjct: 489 NAGRISIAVQLYYEMLRSGHEPDIITYTELIRGLC 523



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 32/276 (11%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G +G A+    ++L+ GF+P++++++ L+ GLC  G L +A  L  ++L     P+  T+
Sbjct: 139 GKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEIGPSPNCATF 198

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIP 451
           ++ I G+C    +     L+ +M   G+KP+ V  ++L++ L                  
Sbjct: 199 NTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHAL------------------ 240

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
                       C+     D  KL   +L      + ++IT T+L+ G    G +  A+ 
Sbjct: 241 ------------CKRGLLEDAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALG 288

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           +++ M +     D + Y+ +IHG    +N+ +       M + G+ PDI  YN L++ L 
Sbjct: 289 IWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLC 348

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           K   L  A  +   +   G+ PD I+Y  +I G C+
Sbjct: 349 KAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCT 384



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 62/114 (54%)

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           H  L+R +   G L +A+ L  ++L +G  PD++T++ +++GL    ++     + K M 
Sbjct: 128 HASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEML 187

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             G +P+ A +N  +       N+D AL LF  ++D G++P+ +T N ++   C
Sbjct: 188 EIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALC 241



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 14/151 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++  ++ G I +A+ + + ++  G  P+++T N ++   C  G+I  A  L+  +
Sbjct: 444 TYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLYYEM 503

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G +P+++T++ LI   C    +++A +L+  +    L  D + + +LI   F     
Sbjct: 504 LRSGHEPDIITYTELIRGLCMRGNMKEAKELFAKLQNTGLTVDHVPFQLLIKNTF----- 558

Query: 300 KEGNELLLTALDRG------LKLDVVVFSSV 324
              N LL  A +R       LKL   V+SS 
Sbjct: 559 ---NLLLTLARNRALGLSYLLKLSSTVWSST 586


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 217/425 (51%), Gaps = 14/425 (3%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L+R G +E        +  +G  P+++ C  +++  C  G+  NAS +  +L   G   +
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V +++ LI+ +CK  ++E+A ++ +    M + P+   Y  ++  L   G+LK+  ++L 
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLD---RMGVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             L      DVV  + ++DA      VG+A++ ++ M N G  P+V++Y++LIKG C+ G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           RL EA     ++     +P +++++ ++   C  G+  D   L   M+++G  P  V  +
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 428 LLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK---RATDTVKLFMLM 479
           +LIN     GL+G AL       +    PN   FN L+ G C  K   RA + +++ +  
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
           G Y   PD++T+ +L+  +   G +  A+++  Q+  +G +P +I+Y+ +I GL K    
Sbjct: 386 GCY---PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 442

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
            + + + + M   G+ PD+     ++  L +E  +  A+K F  L    + P+   YN+I
Sbjct: 443 ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSI 502

Query: 600 ICGYC 604
           I G C
Sbjct: 503 ITGLC 507



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 234/480 (48%), Gaps = 20/480 (4%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM---RGKGFC 179
           +R G+++E      YM++ G   SPD++    + + +   +G+     + M      G  
Sbjct: 90  IRNGELEEGSRFLEYMTNKG--KSPDVIA-CTALIREFCKIGRTKNASQIMGILEESGAV 146

Query: 180 V----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           +    Y  L++G  + G IE A    R + + G  PN  T + +L  LC  G++  A  +
Sbjct: 147 IDVTSYNVLISGYCKSGEIEEAL---RVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQV 203

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
               L     P+VVT + LI+A CKE+ + +A +L+N M      PD++ Y++LI G  K
Sbjct: 204 LGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCK 263

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            GRL E    L      G + DV+  + ++ +    G    A++    ML  G LP+V++
Sbjct: 264 GGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVT 323

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           ++ILI  LCQ+G L +A  +   +      P+  +++ LI GFC    +       + M+
Sbjct: 324 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMV 383

Query: 416 KRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            RG  PD V  ++L+     +G + DA+    Q       P+L  +NT++DG  ++ +A 
Sbjct: 384 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 443

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDVITYSAI 529
             V+L   M    +KPD+IT T ++ G++ +G +  A + FF  LKR  + P+   Y++I
Sbjct: 444 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREA-MKFFHYLKRFAIRPNAFIYNSI 502

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I GL K +  S+ +     M   G  P  A Y  L+  +  E   + A KL  +L  RGL
Sbjct: 503 ITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 211/443 (47%), Gaps = 41/443 (9%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK-LCRAMRGK 176
           LI  + +IG+   + +I   + + G  +       L+S    S  + +  + L R     
Sbjct: 120 LIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMGVSP 179

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
               Y+ ++  L  +G ++ A  +  + +Q    P++VTC  ++   C    +G A  LF
Sbjct: 180 NAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLF 239

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + +   G KP+VVT++ LI  FCK  +L++A +    +      PD+I +++++  L   
Sbjct: 240 NEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSG 299

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG--------------------- 335
           GR  +  +LL T L +G    VV F+ +++     G +G                     
Sbjct: 300 GRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSF 359

Query: 336 --------------RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
                         RA++  + M++ G  P++++Y+IL+  LC+ G++ +A  +  Q+  
Sbjct: 360 NPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS 419

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           +   PSL++Y+++IDG  K GK      L + M  +GLKPD + C+ ++ GL     + +
Sbjct: 420 KGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVRE 479

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A++FF    R  + PN FI+N+++ G C+ ++ +  +     M     KP   T+T LI+
Sbjct: 480 AMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIK 539

Query: 497 GIASQGSLSSAILLFFQMLKRGL 519
           GI  +G    A  L  ++  RGL
Sbjct: 540 GITYEGLAEDASKLSNELYSRGL 562



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 137/279 (49%), Gaps = 8/279 (2%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G++    +  + M N G  P+VI+ + LI+  C+ GR   A  + G +        + +Y
Sbjct: 93  GELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-----DAVVCSLLINGLMGDALRFFFQSVR 446
           + LI G+CKSG++ +   + D M   G+ P     DAV+CSL   G +  A++   + ++
Sbjct: 153 NVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
               P++     L+D  C+       +KLF  M     KPDV+T+ VLI+G    G L  
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           AI    ++   G  PDVI+++ I+  L  G      + +   M R G  P +  +N+L+N
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            L ++  L  AL +   +   G  P+  ++N +I G+C+
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCN 368



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 150/317 (47%), Gaps = 8/317 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ + + G++DE++     +   G    PD++    ++  L          KL   
Sbjct: 254 YNVLIKGFCKGGRLDEAIRFLKKLPSYGC--QPDVISHNMILRSLCSGGRWMDAMKLLAT 311

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       +  L+N L +KG++  A ++   + + G  PN  + N +++  C    
Sbjct: 312 MLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKG 371

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A    ++++  G  P++VT++ L+ A CK+ K++ A  + + +      P LI Y+ 
Sbjct: 372 IDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 431

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +IDGL K G+ +   ELL     +GLK D++  +SV+      G V  A++ +  +    
Sbjct: 432 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFA 491

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN   Y+ +I GLC+  +   A      ++ +  +P+  TY++LI G    G   D  
Sbjct: 492 IRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDAS 551

Query: 409 SLYDNMIKRGLKPDAVV 425
            L + +  RGL   ++V
Sbjct: 552 KLSNELYSRGLVKRSLV 568



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 8/183 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+    + GK+D++V I + +S  G   SP L+    ++  L+         +L   
Sbjct: 394 YNILLTALCKDGKVDDAVVILSQLSSKGC--SPSLISYNTVIDGLLKVGKAELAVELLEE 451

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG          ++ GL R+G +  A      + +    PN    N I+  LC + Q
Sbjct: 452 MCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQ 511

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A      ++  G KP   T++TLI     E   E A +L N +    LV   ++  +
Sbjct: 512 TSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVEKV 571

Query: 289 LID 291
            ++
Sbjct: 572 SLE 574


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 216/438 (49%), Gaps = 16/438 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L++    KG + +A      +   G  P+ VT N +L   C  G +G A +L   +
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG-- 297
              G  P   T++TL++AF +   +++A ++   M      PDL  Y++L  GL +AG  
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKV 329

Query: 298 ----RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
               RLK+  E L TAL      DVV +++++DA         A++  + M + G  P +
Sbjct: 330 DEAFRLKDEMERLSTALP-----DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++++I++K LC++G+L EA G   ++    L P ++TY++LID +CK+G +   F+L D 
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M+ +GLK D    + ++  L       DA        +   +P+   + T+M    +   
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               ++L+  M    + P + T+  LI+G+     L  AI    +++++GL PD  TY+ 
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNI 564

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           IIH   K  ++         M  N   PD+   N L+N L     LD ALKLF    ++G
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 589 LEPDIITYNTIICGYCSL 606
            + D+ITYNT+I   C +
Sbjct: 625 KKVDVITYNTLIQSMCKV 642



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 239/516 (46%), Gaps = 19/516 (3%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVD 159
           R+ RD +      Y+ L+  + R+G I ++ ++   M+  G    PDL     L   L  
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG--FEPDLRTYNVLAVGLCQ 325

Query: 160 SNSVGQYYKLCRAMRG-----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           +  V + ++L   M            Y  L++   +     +A  +  ++  +G  P +V
Sbjct: 326 AGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++K LC  G++  A    + +   G  P+V+T++TLI+A+CK   + KAF L + M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +   L  D    + ++  L K  R ++  ELL +   RG   D V + +VM AY    + 
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A++ +D+M+    +P++ +Y+ LIKGLC+  RL EA     +++ + L P   TY+ +
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNII 565

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           I  +CK G L + F  ++ M++   KPD V C+ L+NGL     +  AL+ F   V    
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK 625

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
             ++  +NTL+   C++      +  F  M +  ++PD  T+ V++  ++  G    A  
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL-MERNGVAPDIAI--YNVLLN 566
           +  ++   G      +++  +          V  H  K   E +  A D A+  Y   LN
Sbjct: 686 MLHKLADSGKLSQ--SFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLN 743

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            L     L  A  +  ++  +G+  D  TY T++ G
Sbjct: 744 GLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEG 779



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 193/418 (46%), Gaps = 18/418 (4%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL--FDVLLLVGPKPNVVTFSTLINA 257
           +H    +RG  P++   N +L  L  +      +SL  F  L+ +   PN  TF+ L++ 
Sbjct: 158 LHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
            C +  L  A    + M    L PD + Y+ L++   + G L E   LL      G+   
Sbjct: 218 HCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPT 277

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
              +++++ A+  +G + +A +  + M   GF P++ +Y++L  GLCQ G++ EA  L  
Sbjct: 278 QPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKD 337

Query: 378 QVLIRRLE---PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-----DAVVCSLL 429
           +  + RL    P ++TY++L+D   K     D   L + M  +G+KP     + VV SL 
Sbjct: 338 E--MERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLC 395

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY---NIKP 486
             G + +AL    +     L P++  +NTL+D  C   +A +  K F LM       +K 
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC---KAGNVAKAFTLMDEMVGKGLKM 452

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           D  T   ++  +        A  L     +RG  PD ++Y  ++   FK  N    L ++
Sbjct: 453 DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLW 512

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             M    + P I+ YN L+  L +   L  A+    +L ++GL PD  TYN II  YC
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYC 570



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 176/375 (46%), Gaps = 40/375 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y + G + ++  +   M   G+ +    +  ++  L          +L  +  
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y  +M    ++   E A  +  Q+I+R  +P+I T N ++K LC   ++ 
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A    + L+  G  P+  T++ +I+A+CKE  LE AF+ +N M+E    PD++  + L+
Sbjct: 542 EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL   G+L +  +L  + +++G K+DV+ +++++ +   +GDV  A+  +D M   G  
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQ 661

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVL----------IRRLEPS------------- 387
           P+  +Y++++  L + GR  EA  +  ++              L+PS             
Sbjct: 662 PDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGK 721

Query: 388 -------------LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
                        L TY   ++G C  G+L++  ++ D M+++G+  D+     L+ GL+
Sbjct: 722 PEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLI 781

Query: 435 GDALRFFFQSVRMTL 449
               R    + + TL
Sbjct: 782 KRQKRQTHAAGQSTL 796



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 2/125 (1%)

Query: 484 IKPDVITHTVLIRGIA-SQGSLSSAIL-LFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
           ++P +     ++  ++ S  +L  A L +F  +++  L P+  T++ ++H       ++ 
Sbjct: 167 VRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLAD 226

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L     M+  G++PD   YN LLN   ++  L  A  L  ++   G+ P   TYNT++ 
Sbjct: 227 ALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVS 286

Query: 602 GYCSL 606
            +  L
Sbjct: 287 AFARL 291


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 155/618 (25%), Positives = 270/618 (43%), Gaps = 84/618 (13%)

Query: 72  HVLLQSDMRDVASHVFDKMVIQFG--KTYNFFRLFRDSLGDFGCDYSFL---IENYVRIG 126
           H+L    ++ +A  V   ++ + G  ++ +       +   +  D+S L   +  ++   
Sbjct: 163 HILAAESLQLLAQDVISWVIRRIGASRSAHLVEFMWANHHKYESDFSILNTLMRGFMNSE 222

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG--------- 177
              ES+EI + M ++G+  S   +  L   L+     G  +KL R M   G         
Sbjct: 223 MAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFN 282

Query: 178 ------------------------FC------VYEFLMNGLLRKGVIENAFHMHRQVIQR 207
                                   FC       Y  L+N    +G   +A      +I+ 
Sbjct: 283 IMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKN 342

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P+++T + I+   C  G +  A  +F+ +  VG  PNV  ++TL++ + K   + +A
Sbjct: 343 GCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQA 402

Query: 268 FQLYNLM-----------------------MEMD------------LVPDLIIYSILIDG 292
             LY  M                        E D            LVPD  +Y + + G
Sbjct: 403 NMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAG 462

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L  AG+L E  + L   L++G+   VV F+SV+ AY   G    A + Y  ML  G +P+
Sbjct: 463 LCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPS 522

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             + S ++ GL ++GRL EA  L  +++ + L  + + ++ L+DG+ K G      SL+ 
Sbjct: 523 SSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWY 582

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M  RG+ PDA+  S  I+GL     + +A   F +  +   +PN F++N+L+ G C   
Sbjct: 583 EMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCG 642

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  + +KL   M    + PD+ T  ++I G   +G + SA   F +M   G+TPD +TY+
Sbjct: 643 KLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYN 702

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I G  K  ++         M  +G  PDI  YN+ +        +  A+ +  +L   
Sbjct: 703 TLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAV 762

Query: 588 GLEPDIITYNTIICGYCS 605
           G+ P+ +TYNT++   C+
Sbjct: 763 GVVPNTVTYNTMMNAVCT 780



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 235/491 (47%), Gaps = 11/491 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S +I  +   G + E+ +IF  + ++G+  +  +   LMS    +  V Q   L   MR
Sbjct: 351 FSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMR 410

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       +  L+ G  + G   +++ + R       VP+    +  +  LC  GQ+ 
Sbjct: 411 DKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLD 470

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A    + +L  G  P+VV F+++I A+ +    + A + Y +M+   LVP     S ++
Sbjct: 471 EAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSML 530

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K GRL+E  +LL   +D+GL ++ V F+ ++D Y  +GD   A   +  M   G  
Sbjct: 531 LGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGIC 590

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ I++S  I GL + G + EA   F ++  +   P+   Y+SLI G C  GKL +   L
Sbjct: 591 PDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKL 650

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M ++GL PD    +++ING      M  A   F +   + + P+   +NTL+ G C+
Sbjct: 651 EREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCK 710

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           +       +    M      PD+ T+ + I+G  S   +S A+ +  +++  G+ P+ +T
Sbjct: 711 VLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVT 770

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ +++ +         +   KL+ +    P++   NVLL+   K+   + AL ++GQ  
Sbjct: 771 YNTMMNAVCTDMLDRAMVLTAKLL-KMAFVPNVVTTNVLLSHFCKQGMPEKAL-IWGQKL 828

Query: 586 DRGLEPDIITY 596
           ++ L  D I Y
Sbjct: 829 NKLLRADFIGY 839


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 248/509 (48%), Gaps = 10/509 (1%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G DY  ++    + G +  +      +  +G  L   +   L+      + +G+ +++  
Sbjct: 128 GIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 187

Query: 172 AMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            M  +  C      Y  L++GL   G +E AF + ++++++G  P+  T   ++K  C  
Sbjct: 188 KMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 247

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G    A  + D +      PNV T++ LI+  C+E K+E+A  ++  M++  L P +I +
Sbjct: 248 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 307

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LI+G  K G +    +LL        K ++  ++ +M+    +    +A     R+++
Sbjct: 308 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 367

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G LP+ ++Y+IL+ G C++G+L  A  +F  +    LEP   T+++LIDG CK G+L  
Sbjct: 368 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 427

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLING--LMGDA--LRFFFQS-VRMTLIPNLFIFNTLMD 461
              +  +M+K+G+  D V  + LI+G   +G A  + F F++ V    +     FN  +D
Sbjct: 428 ANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLD 487

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
              +  +  +   +   M  Y + P V+THT+LI G    G  + ++ +  +M + G +P
Sbjct: 488 ALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSP 547

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           +V TY+ II+GL     +     +   M   GV+P+   Y VL+   +K   LD A ++ 
Sbjct: 548 NVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIV 607

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSCL 610
             +   G +P+   Y+ ++ G+   N+ +
Sbjct: 608 STMVKNGCQPNSHIYSALLSGFVLSNTAI 636



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 219/415 (52%), Gaps = 8/415 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF ++R+++  GFV   +    ++  LC NG +  A      +L +G   +    ++L+ 
Sbjct: 112 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 171

Query: 257 AFCKEAKLEKAFQLYNLM-MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           A C+   L +AF+++  M  E    P+ + YSILI GL +AGRL+E  +L    +++G +
Sbjct: 172 ANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 231

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
                ++ ++ A   IG   +A++  D M     +PNV +Y+ILI  LC++G++ EA G+
Sbjct: 232 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 291

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           F ++L   L P ++T+++LI+G+CK G +   F L   M K   KP+    + L+ GL  
Sbjct: 292 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 351

Query: 434 MGDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           +  + + F    R+    L+P+   +N L+DG C+  +      +F  M    ++PD  T
Sbjct: 352 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFT 411

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLM 549
            T LI G+   G L  A  +   M+K+G++ D +T++A+I G  K GK   V   +F+ M
Sbjct: 412 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF-LFENM 470

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             N        +N  L+ L K+  L+ A  + G++   GL P ++T+  +I G+C
Sbjct: 471 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 525



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/383 (22%), Positives = 161/383 (42%), Gaps = 48/383 (12%)

Query: 93  QFGKTYNFFRLFR----DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           +  K+Y  F L R    + L      Y+ L++ + + G+++ +  IF  M+  G  L PD
Sbjct: 351 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG--LEPD 408

Query: 149 --LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHR 202
                 L+  L     + Q   +  +M  KG  + E     L++G  + G  ++   +  
Sbjct: 409 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 468

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            +++   +    T N  L  L  + ++  A+++   ++  G  P+VVT + LI   C+  
Sbjct: 469 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 528

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +   + ++   M +    P++  Y+I+I+GL   GR++E   +L +    G+  +   ++
Sbjct: 529 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 588

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL--FGQVL 380
            ++ A+V  G + RA Q    M+  G  PN   YS L+ G       + A  L   G + 
Sbjct: 589 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD 648

Query: 381 IRRLE----------------------------------PSLLTYSSLIDGFCKSGKLRD 406
            R L                                   P+   Y+ L+ G CK G++ +
Sbjct: 649 ARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIE 708

Query: 407 GFSLYDNMIKRGLKPDAVVCSLL 429
              L  +M+K GL PD  + S++
Sbjct: 709 ADQLTQDMVKHGLFPDKAISSII 731



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/312 (21%), Positives = 131/312 (41%), Gaps = 18/312 (5%)

Query: 29  DLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFD 88
           D + N+ANA+L  ++K       +           +   A  + +L +      + +V+ 
Sbjct: 492 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT 551

Query: 89  KMVIQFGKTYNFFRLFRD----SLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMS 139
             +I  G   N      +    S+  FG       Y+ L++ +V+ G++D + +I + M 
Sbjct: 552 YTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 611

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA--MRGKGFCVYE----FLMNGLLRKGV 193
             G   +  +   L+S  V SN+      L     +  +     E     L + + R   
Sbjct: 612 KNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMD 671

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +++A  + R  I++  VP     N ++  LC  G+I  A  L   ++  G  P+    S+
Sbjct: 672 VDHALKI-RDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISS 729

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR- 312
           +I  +CK  K +   +   L+++   VP    Y  +I GL   GR++E  +L+   +   
Sbjct: 730 IIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHT 789

Query: 313 GLKLDVVVFSSV 324
           G++ +V V  S+
Sbjct: 790 GIEEEVEVTPSI 801


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 232/452 (51%), Gaps = 10/452 (2%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC-----VY 181
           +ID +  +       GI  +      L+  L   N V     L + +  +  C     +Y
Sbjct: 112 RIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMY 171

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +MNGL ++G  E    + R + Q    P++ T + ++  LC +  +  A +L + +  
Sbjct: 172 GTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQ 231

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
               PN+ T+++LI+  CK  + EK   L + M+ +++ P++  +SILIDGL K G++++
Sbjct: 232 KNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVED 291

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
            +E++   +++G++ D++ +S++MD Y   G V RA + ++ + + G  PN+ SYSILI 
Sbjct: 292 ADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILIN 351

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C++  L +A  LFG++  + L+P  +TYS+++ G  + G++ D   ++D M++ G  P
Sbjct: 352 GYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTP 411

Query: 422 DAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D  + S L+      GL+ +A+  F +  R     N+  +  +++G C+  R  +   +F
Sbjct: 412 DICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIF 471

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             +    + PDV T+ V+I G   +G       +  +M   G   + ITY+ I+ G F+ 
Sbjct: 472 EKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRS 531

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
             IS  +   K M   G + D     VL+N+L
Sbjct: 532 NKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 210/394 (53%), Gaps = 6/394 (1%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN-LMM 275
           N +    C+  +I  A S+  + L  G   NVVTF+TL+     E K+  A  L+  L+ 
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVR 160

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           E    P+ ++Y  +++GL K G  ++   LL        K DV  +S V+DA     ++ 
Sbjct: 161 EKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLD 220

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A+   + M      PN+ +Y+ LI GLC+ G+  +   L  +++   + P++ T+S LI
Sbjct: 221 AAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILI 280

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMG--DALRFFFQSVRMTLI- 450
           DG CK GK+ D   +  +MI++G++PD +  S +++G  L G  D  R  F  +R   I 
Sbjct: 281 DGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIK 340

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN+F ++ L++G C+ K     ++LF  +    +KPD +T++ ++ G+   G +  A  +
Sbjct: 341 PNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKI 400

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F +ML+ G TPD+  +S ++ G FK   +   + +F  +ERN    +I+ Y V++N L K
Sbjct: 401 FDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCK 460

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              +  A  +F +L   GL PD+ TYN +I G+C
Sbjct: 461 NDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFC 494



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 238/486 (48%), Gaps = 10/486 (2%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNG 187
           +D++V +F  M  M    S     +L   +++         L R MR  G  + + ++N 
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 188 LLR----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +      +  I+ AF +    ++ G   N+VT N +L  L    ++ +A  LF  L+   
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 244 P-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
             +PN V + T++N   K    EK   L  +M + +  PD+  YSI+ID L K   L   
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             LL     + +  ++  ++S++D    +G   +       M+N    PNV ++SILI G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC++G++ +A  +   ++ + +EP ++TYS+++DG+C  G++     +++ +  +G+KP+
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
               S+LING      +  A++ F +  +  L P+   ++T++ G   + R  D  K+F 
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFD 402

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M      PD+  H+ L+ G    G +  A+LLF ++ +     ++  Y+ +I+GL K  
Sbjct: 403 EMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKND 462

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +     +F+ +   G+ PD+  YNV++    +E   D    +  ++ D G   + ITYN
Sbjct: 463 RVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYN 522

Query: 598 TIICGY 603
            I+ G+
Sbjct: 523 VIMQGF 528



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 250/529 (47%), Gaps = 12/529 (2%)

Query: 84  SHV-FDKMVIQFGKTYNFF-RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           +H+ FDK V       + F R+ R        D+S L +  + +      V +F  M  +
Sbjct: 32  AHINFDKEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRIL 91

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG--FCVYEF--LMNGLLRKGVIENA 197
           GI +S  ++  + +     + +   + +       G  F V  F  L+ GL  +  + +A
Sbjct: 92  GIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDA 151

Query: 198 FHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
             + +++++     PN V    ++  L   G      SL  ++     KP+V T+S +I+
Sbjct: 152 VVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVID 211

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           A CK+  L+ A  L N M + ++ P++  Y+ LIDGL K G+ ++   LL   ++  +  
Sbjct: 212 ALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINP 271

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +V  FS ++D     G V  A +    M+  G  P++I+YS ++ G C +G++  A  +F
Sbjct: 272 NVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVF 331

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-- 434
             +  + ++P++ +YS LI+G+CK   L     L+  + ++GLKPD V  S +++GL+  
Sbjct: 332 NVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEV 391

Query: 435 ---GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
              GDA + F + +R+   P++ + +TL+ G  +     + + LF  +       ++  +
Sbjct: 392 GRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFY 451

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           TV+I G+     +  A  +F ++   GL PDV TY+ +I G  +         + + ME 
Sbjct: 452 TVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMED 511

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           NG   +   YNV++    +   +   +    ++  RG   D  T   +I
Sbjct: 512 NGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLI 560



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 181/352 (51%), Gaps = 7/352 (1%)

Query: 258 FCKEAK-LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           F KE   L+ A  L++ M+ M  +P +I +S L   +           L       G+ +
Sbjct: 36  FDKEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPI 95

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
              + + V ++Y     +  A       L  G   NV++++ L+ GL  + ++ +A  LF
Sbjct: 96  SDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLF 155

Query: 377 GQVLIRRL-EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
            +++  ++ EP+ + Y ++++G  K G      SL   M +   KPD    S++I+ L  
Sbjct: 156 KKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCK 215

Query: 436 D-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           D     A+    +  +  + PN+F +N+L+DG C+L +      L   M   NI P+V T
Sbjct: 216 DINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHT 275

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
            ++LI G+  +G +  A  +   M+++G+ PD+ITYSAI+ G      +     +F ++ 
Sbjct: 276 FSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLR 335

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             G+ P+I  Y++L+N   K+ NL  A++LFG+++ +GL+PD +TY+TI+ G
Sbjct: 336 DKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHG 387



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 171/334 (51%), Gaps = 5/334 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++GL + G  E    +  +++     PN+ T + ++  LC  G++ +A  +   +
Sbjct: 240 TYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHM 299

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G +P+++T+S +++ +C   ++++A +++N++ +  + P++  YSILI+G  K   L
Sbjct: 300 IEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNL 359

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +  +L      +GLK D V +S+++   + +G +G A + +D ML  G  P++  +S L
Sbjct: 360 AKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTL 419

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G  + G + EA  LF ++   R + ++  Y+ +I+G CK+ ++R+  ++++ +   GL
Sbjct: 420 LFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGL 479

Query: 420 KPDAVVCSLLINGL----MGDALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVK 474
            PD    +++I G     + D ++   + +     P N   +N +M G  R  + ++ V 
Sbjct: 480 IPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVS 539

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
               M       D  T  VLI  +    S+   I
Sbjct: 540 FMKEMAGRGFSFDATTTGVLINVLKENPSIVDMI 573



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 128/298 (42%), Gaps = 43/298 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           +S LI+   + GK++++ E+  +M + G+   PD++    +M        V +  ++   
Sbjct: 276 FSILIDGLCKEGKVEDADEVMRHMIEKGV--EPDIITYSAIMDGYCLRGQVDRARRVFNV 333

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +R KG       Y  L+NG  +K  +  A  +  ++ Q+G  P+ VT + IL  L   G+
Sbjct: 334 LRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGR 393

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTL---------------------------------- 254
           IG+A  +FD +L VGP P++   STL                                  
Sbjct: 394 IGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTV 453

Query: 255 -INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
            IN  CK  ++ +A  ++  +  + L+PD+  Y+++I G  + G   E   +L    D G
Sbjct: 454 VINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNG 513

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
              + + ++ +M  +     +   V     M   GF  +  +  +LI  L +   +V+
Sbjct: 514 CPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVD 571


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 263/521 (50%), Gaps = 33/521 (6%)

Query: 103 LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYL------SPDLVQRLMSC 156
           +FR+S+      +  ++++Y + G+  +++ +   M    +YL      S DLV   +  
Sbjct: 144 VFRESI------FMIIMKHYGKAGQPGQAIRLLLDMR--AVYLCEPTFKSYDLV---LEI 192

Query: 157 LVDSNSVGQYYKLCRAMRGKGF--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           LV  N       +   M  KG    V+ F  +M  L     +++A  + R + + G VPN
Sbjct: 193 LVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPN 252

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
            +    ++  L    Q+  A  L + + ++G  P+V TF+ +I+  CK  K+  A +L +
Sbjct: 253 SIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVD 312

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M+     PD + Y  L+ GL + G+L E  ++L+         +  + +++++ YV  G
Sbjct: 313 RMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCP----NNAILNTLINGYVMSG 368

Query: 333 DVGRAVQTY--DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            +  A Q++  + M+N GF P++ +Y+IL+ GLC++G L  A  L  ++  R  EP+++T
Sbjct: 369 QLKEA-QSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVIT 427

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSV 445
           Y+ L++G CK+G L +   +   M  RGL  ++V+ + LI  L        AL    +  
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMC 487

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
                P+LF +N+L+ G C++ R  +  +LF  M +     + +T+  LI  +  +G+  
Sbjct: 488 TKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQ 547

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ L   ML RG T D ITY+ +I    K  NI  GL +++ M  +G+  D    N+++
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMI 607

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           N L K   +D A +      +RG  PDI+TYN+++ G C +
Sbjct: 608 NGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 224/469 (47%), Gaps = 49/469 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI    +  ++ E++++   M  MG          ++  L   N +    KL   M 
Sbjct: 256 YQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y FL++GL R G +  A    R+++ +   PN    N ++    ++GQ+ 
Sbjct: 316 LRGFYPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLK 371

Query: 231 NASS-LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            A S L + ++  G +P++ T++ L++  CKE  L  A  L N M      P++I Y+IL
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++GL KAG L+E   +L     RGL ++ V+++ ++ A      V  A+     M   G 
Sbjct: 432 VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGC 491

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFG------------------QVLIRR--LEPSL- 388
            P++ +Y+ LI GLC+  R+ EA  LF                     L+RR   + +L 
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551

Query: 389 --------------LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
                         +TY+ LI  FCK G +  G  LY+ MI  GL  D + C+++INGL 
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLC 611

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               + +A  F   ++    +P++  +N++++G C++ R  + + LF  + +  ++PD  
Sbjct: 612 KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAF 671

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           T+   I     +G ++ A L F++ ++ G  P  +T++ +++ L K  N
Sbjct: 672 TYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 234/489 (47%), Gaps = 24/489 (4%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----Y 181
           ++D +  +   M+  G   +  + Q L+  L   N V +  KL   M   G C+     +
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG-CMPDVQTF 291

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +++GL +   I +A  +  +++ RGF P+ +T   +L  LC  G++  A  +    L+
Sbjct: 292 NDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI----LI 347

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYN-LMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             P PN    +TLIN +    +L++A    N  M+     PD+  Y+IL+ GL K G L 
Sbjct: 348 KIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS 407

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              +L+     RG + +V+ ++ +++     G +  A      M   G   N + Y+ LI
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC++ ++  A  L  ++  +  +P L TY+SLI G CK  ++ + F L+ NM+  G  
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV 527

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI---------FNTLMDGCCRLKRATD 471
            + V  + LI+ L+    R  FQ   +TL+ ++           +N L+   C++     
Sbjct: 528 ANNVTYNTLIHALLR---RGAFQKA-LTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEK 583

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++L+  M M  +  D I+  ++I G+   G + +A       + RG  PD++TY+++++
Sbjct: 584 GLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLN 643

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL K   I   L++F  ++  GV PD   YN  ++   KE  ++ A   F +  + G  P
Sbjct: 644 GLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVP 703

Query: 592 DIITYNTII 600
             +T+N ++
Sbjct: 704 SNLTWNVLV 712



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 219/500 (43%), Gaps = 40/500 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   I     IGK     ++   M + GI     +   +M     +   GQ  +L   MR
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
               C   F             ++ +  +++  G  P +                  A++
Sbjct: 175 AVYLCEPTF------------KSYDLVLEILVTGNCPQV------------------ATN 204

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  +L  G  P V TF  ++ A C   +++ A  L   M +   VP+ I+Y  LI  L 
Sbjct: 205 VFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALS 264

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           +  ++ E  +LL      G   DV  F+ V+     +  +  A +  DRML  GF P+ +
Sbjct: 265 QKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNM 324

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS-LYDN 413
           +Y  L+ GLC+ G+L EA     ++LI+   P+    ++LI+G+  SG+L++  S L + 
Sbjct: 325 TYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNET 380

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSV-----RMTLIPNLFIFNTLMDGCCRLKR 468
           MI  G +PD    ++L++GL  +    F + +     R    PN+  +  L++G C+   
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   +   M    +  + + +  LI  +  +  +  A+ L  +M  +G  PD+ TY++
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+GL K   I     +F  M  +G   +   YN L++ L++      AL L   +  RG
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 589 LEPDIITYNTIICGYCSLNS 608
              D ITYN +I  +C + +
Sbjct: 561 CTLDKITYNGLIKAFCKVGN 580



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 155/327 (47%), Gaps = 9/327 (2%)

Query: 97  TYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           + +F R   + +   GC+     Y+ L+    + G ++E+  +   MS  G+ ++  +  
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYN 464

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L+  L     V     L   M  KG       Y  L+ GL +   I+ AF +   ++  
Sbjct: 465 CLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLD 524

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G V N VT N ++  L   G    A +L + +L  G   + +T++ LI AFCK   +EK 
Sbjct: 525 GAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKG 584

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +LY  M+   L  D I  +I+I+GL K G++    E L  A++RG   D+V ++SV++ 
Sbjct: 585 LELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNG 644

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
              +G +  A+  +DR+   G  P+  +Y+  I   C++G + +AC  F + +     PS
Sbjct: 645 LCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPS 704

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            LT++ L+    K     + F + D +
Sbjct: 705 NLTWNVLVYTLLKQSNQENNFFVLDEL 731


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 263/521 (50%), Gaps = 33/521 (6%)

Query: 103 LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYL------SPDLVQRLMSC 156
           +FR+S+      +  ++++Y + G+  +++ +   M    +YL      S DLV   +  
Sbjct: 144 VFRESI------FMIIMKHYGKAGQPGQAIRLLLDMR--AVYLCEPTFKSYDLV---LEI 192

Query: 157 LVDSNSVGQYYKLCRAMRGKGF--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           LV  N       +   M  KG    V+ F  +M  L     +++A  + R + + G VPN
Sbjct: 193 LVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPN 252

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
            +    ++  L    Q+  A  L + + ++G  P+V TF+ +I+  CK  K+  A +L +
Sbjct: 253 SIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVD 312

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M+     PD + Y  L+ GL + G+L E  ++L+         +  + +++++ YV  G
Sbjct: 313 RMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCP----NNAILNTLINGYVMSG 368

Query: 333 DVGRAVQTY--DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            +  A Q++  + M+N GF P++ +Y+IL+ GLC++G L  A  L  ++  R  EP+++T
Sbjct: 369 QLKEA-QSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVIT 427

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSV 445
           Y+ L++G CK+G L +   +   M  RGL  ++V+ + LI  L        AL    +  
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMC 487

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
                P+LF +N+L+ G C++ R  +  +LF  M +     + +T+  LI  +  +G+  
Sbjct: 488 TKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQ 547

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ L   ML RG T D ITY+ +I    K  NI  GL +++ M  +G+  D    N+++
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMI 607

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           N L K   +D A +      +RG  PDI+TYN+++ G C +
Sbjct: 608 NGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 223/469 (47%), Gaps = 49/469 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI    +  ++ E++++   M  MG          ++  L   N +    KL   M 
Sbjct: 256 YQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y FL++GL R G +  A    R+++ +   PN    N ++    ++GQ+ 
Sbjct: 316 LRGFYPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLK 371

Query: 231 NASS-LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            A S L + ++  G +P++ T++ L++  CKE  L  A  L N M      P++I Y+IL
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++GL KAG L+E   +L     RGL ++ V+++ ++ A      V  A+     M   G 
Sbjct: 432 VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGC 491

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFG------------------QVLIRR--LEPSL- 388
            P++ +Y+ LI GLC+  R+ EA  LF                     L+RR   + +L 
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551

Query: 389 --------------LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
                         +TY+ LI  FCK G +  G  LY+ MI  GL  D + C+++INGL 
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLC 611

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               + +A  F   ++    +P++  +N++++G C++ R  + + LF  + +  ++PD  
Sbjct: 612 KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAF 671

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           T+   I     +G ++ A   F++ ++ G  P  +T++ +++ L K  N
Sbjct: 672 TYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 234/489 (47%), Gaps = 24/489 (4%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----Y 181
           ++D +  +   M+  G   +  + Q L+  L   N V +  KL   M   G C+     +
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG-CMPDVQTF 291

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +++GL +   I +A  +  +++ RGF P+ +T   +L  LC  G++  A  +    L+
Sbjct: 292 NDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI----LI 347

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYN-LMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             P PN    +TLIN +    +L++A    N  M+     PD+  Y+IL+ GL K G L 
Sbjct: 348 KIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS 407

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              +L+     RG + +V+ ++ +++     G +  A      M   G   N + Y+ LI
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC++ ++  A  L  ++  +  +P L TY+SLI G CK  ++ + F L+ NM+  G  
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV 527

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI---------FNTLMDGCCRLKRATD 471
            + V  + LI+ L+    R  FQ   +TL+ ++           +N L+   C++     
Sbjct: 528 ANNVTYNTLIHALLR---RGAFQKA-LTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEK 583

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++L+  M M  +  D I+  ++I G+   G + +A       + RG  PD++TY+++++
Sbjct: 584 GLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLN 643

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL K   I   L++F  ++  GV PD   YN  ++   KE  ++ A   F +  + G  P
Sbjct: 644 GLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVP 703

Query: 592 DIITYNTII 600
             +T+N ++
Sbjct: 704 SNLTWNVLV 712



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 218/498 (43%), Gaps = 40/498 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   I     IGK     ++   M + GI     +   +M     +   GQ  +L   MR
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
               C   F             ++ +  +++  G  P +                  A++
Sbjct: 175 AVYLCEPTF------------KSYDLVLEILVTGNCPQV------------------ATN 204

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  +L  G  P V TF  ++ A C   +++ A  L   M +   VP+ I+Y  LI  L 
Sbjct: 205 VFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALS 264

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           +  ++ E  +LL      G   DV  F+ V+     +  +  A +  DRML  GF P+ +
Sbjct: 265 QKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNM 324

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS-LYDN 413
           +Y  L+ GLC+ G+L EA     ++LI+   P+    ++LI+G+  SG+L++  S L + 
Sbjct: 325 TYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNET 380

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSV-----RMTLIPNLFIFNTLMDGCCRLKR 468
           MI  G +PD    ++L++GL  +    F + +     R    PN+  +  L++G C+   
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   +   M    +  + + +  LI  +  +  +  A+ L  +M  +G  PD+ TY++
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+GL K   I     +F  M  +G   +   YN L++ L++      AL L   +  RG
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 589 LEPDIITYNTIICGYCSL 606
              D ITYN +I  +C +
Sbjct: 561 CTLDKITYNGLIKAFCKV 578



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 155/327 (47%), Gaps = 9/327 (2%)

Query: 97  TYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           + +F R   + +   GC+     Y+ L+    + G ++E+  +   MS  G+ ++  +  
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYN 464

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L+  L     V     L   M  KG       Y  L+ GL +   I+ AF +   ++  
Sbjct: 465 CLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLD 524

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G V N VT N ++  L   G    A +L + +L  G   + +T++ LI AFCK   +EK 
Sbjct: 525 GAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKG 584

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +LY  M+   L  D I  +I+I+GL K G++    E L  A++RG   D+V ++SV++ 
Sbjct: 585 LELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNG 644

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
              +G +  A+  +DR+   G  P+  +Y+  I   C++G + +AC  F + +     PS
Sbjct: 645 LCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPS 704

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            LT++ L+    K     + F + D +
Sbjct: 705 NLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 76/154 (49%), Gaps = 1/154 (0%)

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLM-GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
           IF  +M    +  +    ++L + M  +Y  +P   ++ +++  + +      A  +F+ 
Sbjct: 149 IFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYD 208

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           ML +G++P V T+  ++  L     +     + + M ++G  P+  +Y  L++ L ++  
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +  ALKL  ++   G  PD+ T+N +I G C +N
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVN 302


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 235/494 (47%), Gaps = 32/494 (6%)

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM----RGKGFCVYEFLMNGLLRKG----- 192
           G Y SP +   L+     S      YKL + M       G+ VY  L+ G+         
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65

Query: 193 -VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
            VI  A   + ++++ G V N V      + LC  G+   A ++   ++  G  P+  T+
Sbjct: 66  EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S +I   C  +K+EKAFQL+  M    + PD+  Y+ L+D   K G +++          
Sbjct: 126 SKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQ 185

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G   +VV +++++ AY+    + RA + ++ ML+ G +PN+++Y+ LI G C+ G   +
Sbjct: 186 DGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEK 245

Query: 372 ACGLFGQVLIRRL-----------------EPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           AC ++ ++   ++                 EP+++TY +L+DG CK+ K+++   L + M
Sbjct: 246 ACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETM 305

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
              G +P+ ++   LI+G      + +A   F + +     PN++ +++L+D   + KR 
Sbjct: 306 SLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRL 365

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              +K+   M   +  P+V+ +T ++ G+   G    A  L   M ++G  P+V+TY+A+
Sbjct: 366 DLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAM 425

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  K   +   L + +LM   G AP+   Y VL+N       LD A KL  ++     
Sbjct: 426 IDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYW 485

Query: 590 EPDIITYNTIICGY 603
              I  Y  +I G+
Sbjct: 486 PKHIGMYRKVIEGF 499



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 252/554 (45%), Gaps = 39/554 (7%)

Query: 58  THNCVSSPNI-AQLIHVLLQSDMRDVASHVFDKMVI-QFGKTYNFFRLFRDSLGDFGCDY 115
           T  C  SP I   L+H   +S     A  +  KMVI  +   Y  + +    +       
Sbjct: 4   TEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICS----- 58

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
               E+   +  I  +   +  M +MG+ L+   V     CL       + Y + R M  
Sbjct: 59  ---TEDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMS 115

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           KGF      Y  ++  L     +E AF + +++ + G  P++ T   +L R C  G I  
Sbjct: 116 KGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQ 175

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A + FD +   G  PNVVT++ LI+A+ K  KL +A +++ +M+    VP+++ Y+ LID
Sbjct: 176 ARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALID 235

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G  KAG  ++  +               +++ + +  V I DV    +  D  L     P
Sbjct: 236 GHCKAGETEKACQ---------------IYARMKNDKVDIPDVDIYFRIVDSELKE---P 277

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV++Y  L+ GLC+  ++ EA  L   + +   EP+ + Y +LIDGFCK GKL +   ++
Sbjct: 278 NVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVF 337

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M+  G  P+    S LI+ L  D     AL+   + +  +  PN+ I+  ++DG C++
Sbjct: 338 TKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKV 397

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  +  +L ++M      P+V+T+T +I G    G +   + L   M  +G  P+ ITY
Sbjct: 398 GKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITY 457

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
             +I+       +     + + M++      I +Y  ++     E    A+L L  +L++
Sbjct: 458 RVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHE--FVASLGLLAELSE 515

Query: 587 RGLEPDIITYNTII 600
            G  P +  Y  +I
Sbjct: 516 DGSVPILPVYKLLI 529



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 129/553 (23%), Positives = 236/553 (42%), Gaps = 110/553 (19%)

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----V 180
           IGK +++  +   M   G         +++  L +++ V + ++L + M+  G       
Sbjct: 100 IGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYT 159

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++   + G+IE A +   ++ Q G  PN+VT   ++       ++  A+ +F+++L
Sbjct: 160 YTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMML 219

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM-------EMDLV----------PDL 283
             G  PN+VT++ LI+  CK  + EKA Q+Y  M        ++D+           P++
Sbjct: 220 SNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNV 279

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + Y  L+DGL KA ++KE  +LL T    G + + +++ +++D +  +G +  A + + +
Sbjct: 280 VTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTK 339

Query: 344 MLNGGFLPNVISYSILIK-----------------------------------GLCQQGR 368
           ML  G  PNV +YS LI                                    GLC+ G+
Sbjct: 340 MLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGK 399

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
             EA  L   +  +   P+++TY+++IDGF K+G++     L   M  +G  P+ +   +
Sbjct: 400 TDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRV 459

Query: 429 LIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LIN     GL+ DA +   + ++ T  P                           +GMY 
Sbjct: 460 LINHCCAAGLLDDAHK-LLEEMKQTYWPK-------------------------HIGMYR 493

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
              +  +H      +AS G       L  ++ + G  P +  Y  +I    K   + + L
Sbjct: 494 KVIEGFSHEF----VASLG-------LLAELSEDGSVPILPVYKLLIDNFIKAGRLEMAL 542

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            + + +     A     Y  L+  L   C +D A KL+  +T RG  P++          
Sbjct: 543 ELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPEL---------- 591

Query: 604 CSLNSCLIDGYFK 616
            S+  CLI G  +
Sbjct: 592 -SMLVCLIKGLLR 603



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 188/429 (43%), Gaps = 63/429 (14%)

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
           +++  G  P+ + F++L++A+C+      A++L   M+     P  ++Y+ILI G+    
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 298 RLKEGNELLLTA------LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L     + L        L+ G+ L+ V   +       IG   +A      M++ GF+P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  +YS +I  LC   ++ +A  LF ++    + P + TY++L+D FCK G +    + +
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 412 DNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           D M + G  P+ V  + LI+  +       A   F   +    +PN+  +  L+DG C+ 
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 467 KRATDTVKLFMLMGMYNI-----------------KPDVITHTVLIRGIASQ-------- 501
                  +++  M    +                 +P+V+T+  L+ G+           
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARD 300

Query: 502 ---------------------------GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
                                      G L  A  +F +ML  G +P+V TYS++I  LF
Sbjct: 301 LLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLF 360

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K + + L +   M  N  AP++ IY  +++ L K    D A +L   + ++G  P+++
Sbjct: 361 KDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVV 420

Query: 595 TYNTIICGY 603
           TY  +I G+
Sbjct: 421 TYTAMIDGF 429


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 212/427 (49%), Gaps = 40/427 (9%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++  L++        ++ +++  RG  PN+V CN ++   C  G I +A S+   +L +G
Sbjct: 68  ILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMG 127

Query: 244 PKPNVVTFSTLINAFCKEAK----------LEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            KPN +T +TLI   C   K          L+ A  L+N M+  ++ PD+  ++IL+DG 
Sbjct: 128 YKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGF 187

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K GR+KE   +L   + +G+K  VV ++S+MD Y  +  V +A   ++ M   G  P++
Sbjct: 188 CKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDI 247

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            SYSILI G C+   + EA  L  ++  +++ P+++TYSSLIDG CKSGK+     L D 
Sbjct: 248 QSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDE 307

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           M  RG +P                             PN+  +++++D  C+  +  + +
Sbjct: 308 MHDRG-QP-----------------------------PNIVTYSSILDALCKNHQVDNAI 337

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M    I+P++ T+T+LI+G+   G L  A  +F  +L +G   +V TY+ +I G 
Sbjct: 338 ALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGF 397

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
                    L +   ME NG  P+   Y +++  L K+   + A KL  ++ +   +  +
Sbjct: 398 CDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRV 457

Query: 594 ITYNTII 600
              N +I
Sbjct: 458 ALTNDLI 464



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 204/412 (49%), Gaps = 30/412 (7%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +++A  +  +++Q+   P  +  NKIL  L  +        L   +   G KPN+V  + 
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LIN+FC+   +  AF +   +++M   P+ I  + LI GL   G+               
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGK--------------- 147

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
                     + D +  +G +  AV  +++M+     P+V +++IL+ G C++GR+ EA 
Sbjct: 148 ----------IHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAK 197

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING- 432
            +   ++I+ ++P ++TY+SL+DG+    ++    S+++ M + G+ PD    S+LING 
Sbjct: 198 NVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGF 257

Query: 433 ----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
               +M +A+    +     +IPN+  +++L+DG C+  + +  +KL   M      P++
Sbjct: 258 CKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNI 317

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T++ ++  +     + +AI L  QM  +G+ P++ TY+ +I GL +   +     +F+ 
Sbjct: 318 VTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFED 377

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +   G   ++  Y V++     +   D AL L  ++ D G  P+  TY  II
Sbjct: 378 LLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIII 429



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 194/373 (52%), Gaps = 15/373 (4%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           N + + +    F     ++ A  L+N +++ +  P  I ++ ++  L K+        L 
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
                RG+K ++V  + +++++  +G +  A     ++L  G+ PN I+ + LIKGLC  
Sbjct: 86  QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145

Query: 367 GR----------LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           G+          L +A  LF ++++  + P + T++ L+DGFCK G++++  ++   M+ 
Sbjct: 146 GKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           +G+KP  V  + L++G      +  A   F    ++ + P++  ++ L++G C++K   +
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++L   M    I P+V+T++ LI G+   G +S A+ L  +M  RG  P+++TYS+I+ 
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            L K   +   + +   M+  G+ P++  Y +L+  L +   L+ A K+F  L  +G   
Sbjct: 326 ALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL 385

Query: 592 DIITYNTIICGYC 604
           ++ TY  +I G+C
Sbjct: 386 NVYTYTVMIQGFC 398



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 204/426 (47%), Gaps = 40/426 (9%)

Query: 19  YCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSD 78
           Y S S T  ++   + A ++   L++ N   P I+F K   + V S +   ++++  + +
Sbjct: 30  YFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKME 89

Query: 79  MRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM 138
            R +  ++ +                        C+   LI ++ ++G I  +  +   +
Sbjct: 90  FRGIKPNLVN------------------------CN--ILINSFCQLGHIPSAFSVLTKI 123

Query: 139 SDMGIYLSPDLVQRLMS------------CLVDS--NSVGQYYKLCRAMRGKGFCVYEFL 184
             MG   +   +  L+             C+V    ++V  + K+           +  L
Sbjct: 124 LKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTIL 183

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++G  ++G ++ A ++   ++ +G  P +VT N ++    +  Q+  A S+F+ +  +G 
Sbjct: 184 VDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGV 243

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
            P++ ++S LIN FCK   +++A +L   M    ++P+++ YS LIDGL K+G++    +
Sbjct: 244 SPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALK 303

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           L+    DRG   ++V +SS++DA      V  A+    +M N G  PN+ +Y+ILIKGLC
Sbjct: 304 LVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLC 363

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           Q G+L +A  +F  +L++    ++ TY+ +I GFC  G   +  +L   M   G  P+A 
Sbjct: 364 QSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAK 423

Query: 425 VCSLLI 430
              ++I
Sbjct: 424 TYEIII 429



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 179/381 (46%), Gaps = 58/381 (15%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF------CVY 181
           +D++V +F  +             +++  LV S        L + M  +G       C  
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC-- 100

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI----------GN 231
             L+N   + G I +AF +  ++++ G+ PN +T N ++K LC+NG+I           +
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKD 160

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE-------------------------- 265
           A  LF+ ++L    P+V TF+ L++ FCKE +++                          
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220

Query: 266 ---------KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
                    KA  ++N M ++ + PD+  YSILI+G  K   + E  ELL     + +  
Sbjct: 221 GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIP 280

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV +SS++D     G +  A++  D M + G  PN+++YS ++  LC+  ++  A  L 
Sbjct: 281 NVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALL 340

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN----- 431
            Q+  + ++P++ TY+ LI G C+SGKL D   ++++++ +G   +    +++I      
Sbjct: 341 TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDK 400

Query: 432 GLMGDALRFFFQSVRMTLIPN 452
           GL  +AL    +      IPN
Sbjct: 401 GLFDEALTLLSKMEDNGCIPN 421



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 143/289 (49%), Gaps = 20/289 (6%)

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            + + + S    +    DV  AV  ++R+L     P  I ++ ++  L +         L
Sbjct: 25  FNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYL 84

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
             ++  R ++P+L+  + LI+ FC+ G +   FS+   ++K G KP+ +  + LI GL  
Sbjct: 85  SQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCL 144

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +                      + D  C + +  D V LF  M + NI PDV T T+L+
Sbjct: 145 NG--------------------KIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILV 184

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G   +G +  A  +   M+ +G+ P V+TY++++ G F  K ++    +F  M + GV+
Sbjct: 185 DGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVS 244

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           PDI  Y++L+N   K   +D A++L  ++  + + P+++TY+++I G C
Sbjct: 245 PDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLC 293



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 36/284 (12%)

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
           G   V +   ++  ++N  F  N I Y            + +A  LF ++L +   P  +
Sbjct: 6   GFVPVSKKFHSFQFLINTHF--NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNI 63

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQS 444
            ++ ++    KS        L   M  RG+KP+ V C++LIN     G +  A     + 
Sbjct: 64  EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKI 123

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           ++M   PN    NTL+ G C   +  D                   H ++       G L
Sbjct: 124 LKMGYKPNTITLNTLIKGLCLNGKIHDK------------------HCIV-------GKL 158

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ LF +M+   + PDV T++ ++ G  K   +    ++  +M   G+ P +  YN L
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218

Query: 565 LN--MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           ++   L+K+ N   A  +F  +   G+ PDI +Y+ +I G+C +
Sbjct: 219 MDGYFLVKQVN--KAKSIFNTMAQLGVSPDIQSYSILINGFCKI 260



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 4/201 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  + +I  +DE++E+   M    I  +      L+  L  S  +    KL   M 
Sbjct: 250 YSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMH 309

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  +++ L +   ++NA  +  Q+  +G  PN+ T   ++K LC +G++ 
Sbjct: 310 DRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLE 369

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  +F+ LL+ G   NV T++ +I  FC +   ++A  L + M +   +P+   Y I+I
Sbjct: 370 DARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIII 429

Query: 291 DGLFKAGRLKEGNELLLTALD 311
             LFK    +   +LL   ++
Sbjct: 430 LSLFKKDENEMAEKLLCEMIE 450



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 9/198 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS LI+   + GKI  ++++   M D G    P++V    ++  L  ++ V     L   
Sbjct: 285 YSSLIDGLCKSGKISYALKLVDEMHDRG--QPPNIVTYSSILDALCKNHQVDNAIALLTQ 342

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ +G       Y  L+ GL + G +E+A  +   ++ +G   N+ T   +++  C  G 
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A +L   +   G  PN  T+  +I +  K+ + E A +L   M+E +    + + + 
Sbjct: 403 FDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTND 462

Query: 289 LIDGLFKAGRLKEGNELL 306
           LI  ++  G    GN LL
Sbjct: 463 LIASIWVTGS-SPGNSLL 479


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 160/634 (25%), Positives = 279/634 (44%), Gaps = 59/634 (9%)

Query: 13  RSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIH 72
           R+  +   S +  H++DL F    A L       +P  A+ FF+W        + A    
Sbjct: 41  RAYKRLAPSVTAAHVADL-FRAPVAPL-------DPATALAFFEWVARRPGFRHTAASHA 92

Query: 73  VLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIG-KIDES 131
            LLQ   R  A   +DK+V+      +     R+++          I+   R+G  + ++
Sbjct: 93  ALLQLLARRRAPANYDKLVVSMVSCSDTAEDMREAVD--------AIQAIRRVGGDLRKA 144

Query: 132 VEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNG 187
             +   M  MG   +      L+  L ++  V +   L   M   G       Y  L+ G
Sbjct: 145 CWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKG 204

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA--------------- 232
           L ++G I  A  +  ++  RG VP++ T N ++   C +G++ +A               
Sbjct: 205 LCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPD 264

Query: 233 -------------------SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
                                L +  ++ G  P V+TF+ +IN +CK  +++ A ++   
Sbjct: 265 DWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTS 324

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M+  +   DL  Y +LI+ L K  R KE  E +      GL  +VV+++S++D Y  +G 
Sbjct: 325 MLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGK 384

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           VG A++ +  M + G  PN  +YS LI GL Q  +L +A  L  ++    + P ++TY++
Sbjct: 385 VGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTT 444

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLIP 451
           LI G CK  +  + F L++ M + GL PD    ++L + L   G A   +   VR  ++ 
Sbjct: 445 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVL 504

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
               + +L+DG  +         L   M     K D  T++VL++ +  Q  L+ A+ + 
Sbjct: 505 TKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSIL 564

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            QM   G+  +++ Y+ II  + K         MF  M  +G  P    Y V ++   K 
Sbjct: 565 DQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKI 624

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTII--CGY 603
             ++ A  L G++   G+ PD++TYN  I  CG+
Sbjct: 625 GQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGH 658



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 144/265 (54%), Gaps = 4/265 (1%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+  G   N+ +Y++LIKGLC++GR+  A  +  ++ +R + PS+ TY+++IDG+CKSG+
Sbjct: 186 MVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGR 245

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD----ALRFFFQSVRMTLIPNLFIFNTL 459
           ++D   +   M + G  PD    ++LI GL G+    A      ++     P +  F  +
Sbjct: 246 MKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNI 305

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           ++G C+ +R  D +++   M   N K D+  + VLI  +  +     A     +M   GL
Sbjct: 306 INGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGL 365

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P+V+ Y++II G  K   +   L +F+LME  G  P+   Y+ L+  LI++  L  A+ 
Sbjct: 366 APNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMA 425

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           L  ++ + G+ P +ITY T+I G C
Sbjct: 426 LITKMQEDGITPGVITYTTLIQGQC 450



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 211/480 (43%), Gaps = 33/480 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+ Y ++GK+  ++E+F  M   G   +      L+  L+    + +   L   M+
Sbjct: 372 YTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 431

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G  +K   +NAF +   + Q G  P+    N +   LC +G+  
Sbjct: 432 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGR-- 489

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   +  L+  G     VT+++L++ F K    + A  L   M+      D   YS+L+
Sbjct: 490 -AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLL 548

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K  +L E   +L      G+K ++V ++ ++   +  G    A   ++ M++ G  
Sbjct: 549 QALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK 608

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +Y++ I   C+ G++ EA  L G++    + P ++TY+  I+G    G +   FS 
Sbjct: 609 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFST 668

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              MI    +P+     +L        L+ F   ++M+L+   ++  + M     L    
Sbjct: 669 LKRMIDASCEPNYWTYWIL--------LKHF---LKMSLVDAHYVDTSGMWNWIEL---- 713

Query: 471 DTV-KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           DTV +L   M  + + P  +T++ +I G      L  A +LF  M  + ++P+   Y+ +
Sbjct: 714 DTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTML 773

Query: 530 IH-----GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           I       LF GK +S    M +     G  P +  Y+ L+  L  E + D A  LF  L
Sbjct: 774 IKCCCDIKLF-GKAVSFVTDMIEF----GFQPHLESYHYLIVGLCDEGDYDKAKSLFCDL 828



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/270 (19%), Positives = 105/270 (38%), Gaps = 60/270 (22%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV----------------------QR 152
           Y+  I +Y +IG+I+E+  +   M   G+  +PD+V                      +R
Sbjct: 614 YTVFISSYCKIGQIEEAEHLIGEMERDGV--APDVVTYNVFINGCGHMGYMDRAFSTLKR 671

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           ++    + N    +  L   ++      +    +G+     ++  + +  ++++ G  P 
Sbjct: 672 MIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPT 731

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVL--------------------------------- 239
            VT + I+   C   ++  A  LFD +                                 
Sbjct: 732 AVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVT 791

Query: 240 --LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY-NLMMEMDLVPDLIIYSILIDGLFKA 296
             +  G +P++ ++  LI   C E   +KA  L+ +L+   D   + + + IL DGL KA
Sbjct: 792 DMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKA 851

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           G +   ++LL    +R  ++D   +S V D
Sbjct: 852 GHVDFCSQLLSAMENRHCQIDSETYSMVTD 881


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 223/432 (51%), Gaps = 9/432 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +      L R G  + A  M R + + G VP+ V    ++  LC  G +  A++L D +
Sbjct: 174 TFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEM 233

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            L+G   +V TF+ +++  C   +L +A +L + MM    VP+ I Y  L+ GL  A ++
Sbjct: 234 FLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQV 293

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E      T L R  +L+VV+F++V+   +  G +  A + Y+ M + G  P+  +YSIL
Sbjct: 294 EEAR----TMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSIL 349

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+ GRL  A  L  ++  +   PS++TY+ L+  FC++G   +  ++ + M  +GL
Sbjct: 350 IHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGL 409

Query: 420 KPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             +      ++C++  +  M DA+RF  +       P++  +NT++   C   +  +   
Sbjct: 410 SMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEY 469

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  +    +  + IT+  LI  +   GS   AI L   M+  G + D+++Y+ +I  L 
Sbjct: 470 LFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALC 529

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +  N+   + +   M   G+ P+   YN+L++ L K   +  AL+L  ++ ++ L PDI+
Sbjct: 530 RDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIV 589

Query: 595 TYNTIICGYCSL 606
           TYNT+I G C +
Sbjct: 590 TYNTLINGLCKM 601



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 242/509 (47%), Gaps = 17/509 (3%)

Query: 103 LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS 162
           + RD +      +S       R+G+ DE++ +   M+  G      L Q ++  L     
Sbjct: 163 VHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGG 222

Query: 163 VGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           V +   L   M   G       +  +++GL   G +  A  +  +++ RG VPN +T   
Sbjct: 223 VNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGF 282

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           +LK LC+  Q+  A ++   +    P+ NVV F+T+I     + KL++A +LY  M    
Sbjct: 283 LLKGLCLASQVEEARTMLGRV----PELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKG 338

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV--GIGDVGR 336
             PD   YSILI GL K GRL    +LL    D+G    +V ++ ++ ++   G+ D  R
Sbjct: 339 CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIR 398

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+   + M + G   N+  Y+ +I  +C+  R+ +A     ++  +  +P + TY+++I 
Sbjct: 399 AM--LEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIY 456

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIP 451
             C + ++ +   L++N++  G+  +A+     + +LL NG   DA+      V      
Sbjct: 457 HLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSL 516

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           ++  +N L+   CR      ++ L   M    IKP+ +++ +LI  +     +  A+ L 
Sbjct: 517 DIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELS 576

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +ML + LTPD++TY+ +I+GL K   +   L++ + +    V  DI  YN+L++   K 
Sbjct: 577 KEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKA 636

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTII 600
             L  A  L  +    G+ P+  T+  ++
Sbjct: 637 RLLHDASMLLNRAVTSGITPNERTWGIMV 665



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 198/467 (42%), Gaps = 50/467 (10%)

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           E L+  L R      A H+  Q+  R  V P+  + N +L           A    DVL 
Sbjct: 104 ESLLIPLFRSLAPGRALHLLDQLPHRFAVSPSFRSYNTVL------AAFARADCHTDVLS 157

Query: 241 LVGP-------KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           L           P   TFS    A C+  + ++A  +   M     VPD ++Y  +I  L
Sbjct: 158 LYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHAL 217

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
              G + E   LL      G   DV  F+ ++     +G +  A +  DRM+  G +PN 
Sbjct: 218 CAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNA 277

Query: 354 ISYSILIKGLC-------------------------------QQGRLVEACGLFGQVLIR 382
           I+Y  L+KGLC                                 G+L EA  L+  +  +
Sbjct: 278 ITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSK 337

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----MGDAL 438
              P   TYS LI G CK G+L     L   M  +G  P  V  ++L++      M D +
Sbjct: 338 GCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNI 397

Query: 439 RFFFQSVR-MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           R   + +    L  NL  +N ++   C+ +R  D ++    M     KPD+ T+  +I  
Sbjct: 398 RAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYH 457

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           + +   +  A  LF  +L  G+  + ITY+ +IH L +  +    + +   M  +G + D
Sbjct: 458 LCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLD 517

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           I  YN L+  L ++ N+D ++ L  ++ ++G++P+ ++YN +I   C
Sbjct: 518 IVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELC 564



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 43/368 (11%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI-IYSILIDGLFKAGRLKEGN 303
            P+  +++T++ AF +         LY  M+  D VP     +SI    L + GR  E  
Sbjct: 133 SPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEAL 192

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +L +                                   M   G +P+ + Y  +I  L
Sbjct: 193 TMLRS-----------------------------------MARHGCVPDTVLYQTVIHAL 217

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C QG + EA  L  ++ +      + T++ ++ G C  G+LR+   L D M+ RG  P+A
Sbjct: 218 CAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNA 277

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTL--IP--NLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           +    L+ GL    L    +  R  L  +P  N+ +FNT++  C    +  +  +L+  M
Sbjct: 278 ITYGFLLKGL---CLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETM 334

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
           G     PD  T+++LI G+   G L SA+ L  +M  +G  P ++TY+ ++H   +    
Sbjct: 335 GSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMW 394

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                M ++M   G++ ++  YN ++  + K+  +D A++   ++  +G +PDI TYNTI
Sbjct: 395 DNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTI 454

Query: 600 ICGYCSLN 607
           I   C+ N
Sbjct: 455 IYHLCNNN 462



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/425 (22%), Positives = 196/425 (46%), Gaps = 38/425 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y FL++      +++E+  +   + ++ + L   ++ R   CL+D   + +  +L   M 
Sbjct: 280 YGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGR---CLLDGK-LKEAAELYETMG 335

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++GL + G + +A  + R++  +GF P+IVT   +L   C NG   
Sbjct: 336 SKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWD 395

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           N  ++ +V+   G   N+  ++ +I A CK+ +++ A +    M      PD+  Y+ +I
Sbjct: 396 NIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTII 455

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L    +++E   L    L  G+  + + +++++ A +  G    A+   + M+  G  
Sbjct: 456 YHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCS 515

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +++SY+ LIK LC+ G +  +  L  ++  + ++P+ ++Y+ LI   CK+ ++RD   L
Sbjct: 516 LDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALEL 575

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M+ + L PD V                               +NTL++G C++    
Sbjct: 576 SKEMLNQELTPDIVT------------------------------YNTLINGLCKMGWMH 605

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + L   +   ++  D+IT+ +LI        L  A +L  + +  G+TP+  T+  ++
Sbjct: 606 AALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMV 665

Query: 531 HGLFK 535
               +
Sbjct: 666 QNFVR 670



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 1/126 (0%)

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG-LTPDVITYSAIIHGLFKGKNIS 540
           + + P   ++  ++   A     +  + L+ +M+ R  + P   T+S     L +     
Sbjct: 130 FAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRAD 189

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             L M + M R+G  PD  +Y  +++ L  +  ++ A  L  ++   G   D+ T+N I+
Sbjct: 190 EALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIV 249

Query: 601 CGYCSL 606
            G C+L
Sbjct: 250 HGLCTL 255


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 261/519 (50%), Gaps = 16/519 (3%)

Query: 92  IQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL-V 150
           + F  T N F L R S   +       I+N      +D++V  F ++  M   + P    
Sbjct: 14  LSFPSTPNLFLLCRHSRLYYTQPLPSFIDN------VDDAVSSFNHILHMRNPVQPIFEF 67

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
            +++S LV  N         + M  K        +  L+N     G +  AF +  ++ +
Sbjct: 68  NKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFK 127

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            GF P+ VT   ++K LC+NG++  A    D ++  G   + V++ TLIN  CK  +   
Sbjct: 128 LGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRA 187

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A Q+   +  + + P++++Y+ +ID L K   +   ++L    + + +  DVV +++++ 
Sbjct: 188 ALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIY 247

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
             + +G +  AV  +++ML     P+V +++IL+ GLC++G + +A  +   ++ + ++ 
Sbjct: 248 GCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDS 307

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           +++TY+SL+DG+    +      +++ M +RG+ PD    S++INGL     + +A+  F
Sbjct: 308 NIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLF 367

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +    ++ PN   +N+L+DG  +  R +D   L   M       DVIT++ L+  +   
Sbjct: 368 KEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKN 427

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
             +  AI L  ++  +G+ P++ TY+ ++ GL K   +     +++ +   G   D+ +Y
Sbjct: 428 HQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMY 487

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           NV++N L KE   D AL L  ++ D G  PD +TY T++
Sbjct: 488 NVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLV 526



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 240/494 (48%), Gaps = 35/494 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI  +  +G ++ +  + A +  +G +     +  L+  L  +  V +       + 
Sbjct: 102 FNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVI 161

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KGF +    Y  L+NGL + G    A  + R++      PN+V  N I+  LC +  + 
Sbjct: 162 AKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVI 221

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +AS L   +++    P+VVT++TLI       +L++A  L+N M+  ++ PD+  ++IL+
Sbjct: 222 HASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILV 281

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K G +K+   +L   + +G+  ++V ++S+MD Y  +    +A   ++ M   G  
Sbjct: 282 DGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVT 341

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V SYSI+I GLC+   + EA  LF ++  + + P+ +TY+SLIDG  K G++ D + L
Sbjct: 342 PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDL 401

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            + M  RG   D +                               +++L+D  C+  +  
Sbjct: 402 VNEMHNRGQPADVIT------------------------------YSSLLDALCKNHQVD 431

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + L   +    I+P++ T+T+L+ G+   G L  A  ++  +L +G   DV  Y+ ++
Sbjct: 432 KAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMV 491

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +GL K       L +   ME NG  PD   Y  L+  L +    D A+KL  ++  +G  
Sbjct: 492 NGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSA 551

Query: 591 -PDIITYNTIICGY 603
               I+ N+++C Y
Sbjct: 552 VGSNISSNSMLCVY 565



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 207/404 (51%), Gaps = 7/404 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           R  V  I   NKIL  L        A S    + L   +P++ TF+ LIN FC    L  
Sbjct: 58  RNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNF 117

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           AF +   + ++   PD +  + LI GL   G+++E        + +G  LD V + ++++
Sbjct: 118 AFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLIN 177

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFL-PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
                G+   A+Q   R ++G  + PNV+ Y+ +I  LC+   ++ A  L  +++++R+ 
Sbjct: 178 GLCKTGETRAALQVL-RKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIF 236

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P ++TY++LI G    G+L++   L++ M+ + +KPD    ++L++GL     M  A   
Sbjct: 237 PDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNV 296

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
               ++  +  N+  +N+LMDG   +K+      +F  M    + PDV +++++I G+  
Sbjct: 297 LAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCK 356

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
              +  A+ LF +M  + + P+ +TY+++I GL K   IS    +   M   G   D+  
Sbjct: 357 TKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVIT 416

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           Y+ LL+ L K   +D A+ L  ++ D+G++P+I TY  ++ G C
Sbjct: 417 YSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLC 460



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 223/439 (50%), Gaps = 7/439 (1%)

Query: 173 MRGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           MR     ++EF  +++ L++      A    +Q+  +   P++ T N ++   C  G + 
Sbjct: 57  MRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLN 116

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+   +  +G  P+ VT +TLI   C   K+ +A   ++ ++      D + Y  LI
Sbjct: 117 FAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLI 176

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K G  +   ++L       ++ +VV++++++D+      V  A      M+     
Sbjct: 177 NGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIF 236

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V++Y+ LI G    GRL EA GLF Q+L++ ++P + T++ L+DG CK G+++   ++
Sbjct: 237 PDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNV 296

Query: 411 YDNMIKRGLKPDAVVCSLLINGL----MGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCR 465
              MIK+G+  + V  + L++G       +   F F ++ R  + P++  ++ +++G C+
Sbjct: 297 LAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCK 356

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            K   + V LF  M   ++ P+ +T+  LI G+   G +S A  L  +M  RG   DVIT
Sbjct: 357 TKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVIT 416

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           YS+++  L K   +   + +   ++  G+ P+I  Y +L++ L K   L  A  ++  L 
Sbjct: 417 YSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLL 476

Query: 586 DRGLEPDIITYNTIICGYC 604
            +G   D+  YN ++ G C
Sbjct: 477 IKGYHLDVKMYNVMVNGLC 495


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 153/583 (26%), Positives = 267/583 (45%), Gaps = 59/583 (10%)

Query: 69  QLIHVL--LQSDMRDVASHVFDKMVIQFGKTYNFFRLF---------RDSLGDFGCDYSF 117
           Q+I V+  L  +   V S  F   VI F K  +F RL+          D+L         
Sbjct: 104 QVITVVASLAQEAGSVVSLSFFNWVIGFSKFRHFMRLYIVCATTFLNNDNLDRATEVMQC 163

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSP----------------DLVQRLMSCLVDSN 161
           ++ ++  IGK+ E+V +   M + G+ L                  D  +++   ++D  
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 162 SV--GQYYKL-----CRAMR------------GKGFCV----YEFLMNGLLRKGVIENAF 198
            V     YKL     CR  R             +G+ V       +++    KG +  AF
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
              ++ +Q G  PN++  + ++  LC  G I  A  + + ++  G KPNV T + LI+  
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 259 CKEAKLEKAFQLY-NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           CK+   EKAF+L+  L+   +  P++  Y+ +I+G  K  +L     LL+   ++GL  +
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
              ++ ++D +   G+ GRA +  D M   GF PN+ +Y+ +I GLC++GR  EA  L  
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
           + L   L    +TY+ LI  FC+    +   +++  M K GL+PD    ++LI       
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            + ++ + F ++V + L+P    + +++ G CR    +  +K F  M  Y  KPD IT+ 
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYG 583

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G+ ++  L  A  L+  M+  GL+P  +T   + +   K  + +  + + + +E+ 
Sbjct: 584 ALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKK 643

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
                I   N L+  L  E  +  A   F +L D+ L  D IT
Sbjct: 644 LW---IRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRIT 683



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 180/359 (50%), Gaps = 12/359 (3%)

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A ++++ M++  +VPD   Y +++ G  + GR+ + +  L   ++RG  +D    + ++ 
Sbjct: 212 AEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMIS 271

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            +   G V RA   + + +  G  PN+I++S LI GLC+ G + +A  +  +++ +  +P
Sbjct: 272 TFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKP 331

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR-GLKPDAVVCSLLINGL-----MGDALRF 440
           ++ T+++LIDG CK G     F L+  +++    KP+    + +ING      +  A   
Sbjct: 332 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEML 391

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             +     L+PN   +  L+DG C+        +L  LMG     P++ T+  +I G+  
Sbjct: 392 LIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCK 451

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           +G    A  L  + LK GL  D +TY+ +I    +  +    L +F  M + G+ PD+  
Sbjct: 452 KGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHT 511

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           YNVL+    ++  ++ + KLF +    GL P   TY ++ICGYC       DG+  S I
Sbjct: 512 YNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCR------DGHISSAI 564



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 225/517 (43%), Gaps = 61/517 (11%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           +I V L     D A  VFD+M            L R  + D    Y  ++  Y R+G+I 
Sbjct: 199 VIDVALALGFVDYAEKVFDEM------------LDRAVVPD-STSYKLMVVGYCRMGRIS 245

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ---YYKLCRAMR-GKGFCVYEFLM 185
           +       M + G  +       ++S   +   V +   Y+K    M        +  L+
Sbjct: 246 DVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLI 305

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP- 244
           NGL + G I+ AF M  +++++G+ PN+ T   ++  LC  G    A  LF  L+     
Sbjct: 306 NGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNY 365

Query: 245 KPNVVTFSTLINAFCKEAKLEKA-----------------------------------FQ 269
           KPNV T++ +IN +CKE KL +A                                   ++
Sbjct: 366 KPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYE 425

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L +LM +    P++  Y+ +IDGL K GR  E  +LL   L  GL  D V ++ ++  + 
Sbjct: 426 LMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFC 485

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
              D  +A+  + RM   G  P++ +Y++LI   C+Q ++ E+  LF + +   L P+  
Sbjct: 486 RQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKE 545

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           TY+S+I G+C+ G +      +  M   G KPD++    LI+GL     + +A + +   
Sbjct: 546 TYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETM 605

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           +   L P      TL    C   +  D+    +++     K  + T   LIR + S+  +
Sbjct: 606 IDNGLSPCEVTRVTLAYEYC---KQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEKKV 662

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             A L F ++L + L  D IT +A     ++    ++
Sbjct: 663 GVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFAL 699



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 200/421 (47%), Gaps = 8/421 (1%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G ++ A +M  ++   G V      N ++      G +  A  +FD +L     P+  ++
Sbjct: 172 GKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSY 231

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
             ++  +C+  ++    +    M+E     D    +++I    + G +          + 
Sbjct: 232 KLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQ 291

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            GL  +++ FSS+++    IG + +A +  + M+  G+ PNV +++ LI GLC++G   +
Sbjct: 292 MGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEK 351

Query: 372 ACGLFGQVLIR--RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
           A  LF + L+R    +P++ TY+ +I+G+CK  KL     L   M ++GL P+    + L
Sbjct: 352 AFRLFLK-LVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCL 410

Query: 430 INGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I+G       G A        +    PN+F +N ++DG C+  R  +  KL        +
Sbjct: 411 IDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGL 470

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
             D +T+T+LI     Q     A+ +F +M K GL PD+ TY+ +I    + K +     
Sbjct: 471 HADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEK 530

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +F+     G+ P    Y  ++    ++ ++ +A+K F ++ D G +PD ITY  +I G C
Sbjct: 531 LFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLC 590

Query: 605 S 605
           +
Sbjct: 591 N 591



 Score = 45.4 bits (106), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 52/107 (48%)

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +  A  +F +ML R + PD  +Y  ++ G  +   IS      K M   G A D A  
Sbjct: 207 GFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATC 266

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            ++++   ++  ++ A   F +    GL P++I ++++I G C + S
Sbjct: 267 TLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGS 313


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/599 (24%), Positives = 280/599 (46%), Gaps = 52/599 (8%)

Query: 44  KTNNPTPAIQFFKWT-------HNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGK 96
           +++ P  AIQFF W        H+ V S N   L+ +L++S        V+ K ++  G 
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHD-VHSYN--HLLDILVKSGHHFRTGKVY-KDLLHSGC 58

Query: 97  TYNF--FRL----------------FRDSLGDFGCD-----YSFLIENYVRIGKIDESVE 133
           + N   F++                F  +L +F        ++ LI    + G  D++V+
Sbjct: 59  SPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVK 118

Query: 134 IFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG------FCVYEFLM 185
           +F  M    +   P++V    ++S L  S ++ +  +L   M  KG         Y  L+
Sbjct: 119 LFENMESSRV--KPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLI 176

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           N   R   I  A     ++   G  P+++TCN ++  +C +G +  A  + D + L GP 
Sbjct: 177 NAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPV 236

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+V+T++++I+A C   K+ +A ++   +  M   PDL+ ++ L+DG  KAG L    E+
Sbjct: 237 PDVITYNSIIHALCVAGKVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEV 293

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L       +  DV+ ++ +++    +G V  A    + ++  G++P+VI+Y+ L+ GLC+
Sbjct: 294 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 353

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G + EA  L  ++ +R     ++ YSSL+ G+C++G +     +   M+   + P    
Sbjct: 354 SGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFT 413

Query: 426 CSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            ++++ GL+ D     A+      V    +P++  +NTL+DG C+  R  +   L   M 
Sbjct: 414 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 473

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                P+ +T   ++ G+   G +  A  L  +M ++   P+V+ Y+++I GL K   + 
Sbjct: 474 SRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 533

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
               +   M   GVA D   Y  L+  +     +  A+ ++ ++  RG  PD  T  T+
Sbjct: 534 DACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 222/452 (49%), Gaps = 11/452 (2%)

Query: 163 VGQYYK-LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
            G+ YK L  +        ++ L+ G  + G    A    R + +    P++   N ++ 
Sbjct: 46  TGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIH 105

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM--DL 279
            L  +G    A  LF+ +     KP +VT++T+I+  CK   LEKA +L   M+      
Sbjct: 106 GLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKS 165

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            PD++ Y+ LI+  ++A R++E           G+  DV+  + ++      GDV  A++
Sbjct: 166 APDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALE 225

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
             D M   G +P+VI+Y+ +I  LC  G++VEA  +   +      P L+T+++L+DGFC
Sbjct: 226 ILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFC 282

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFF---QSVRMTLIPNLF 454
           K+G L     + + M +  + PD +  ++L+NGL  +G     F+   + VR   IP++ 
Sbjct: 283 KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            + +L+DG C+     +  KL   M +   +  V+ ++ L+ G    G++  A  +  +M
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           +   + P + TY+ ++ GL K  +IS  + +   +   G  PD+  YN L++ L K   +
Sbjct: 403 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV 462

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             A  L  ++  RG  P+ +T  +++ G C +
Sbjct: 463 REACDLADEMASRGCFPNDVTLGSVVFGLCRV 494



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 209/441 (47%), Gaps = 39/441 (8%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           Q G+  ++ + N +L  L  +G       ++  LL  G  PN+VTF  LI   CK  +  
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A +    + E  + PD+ I+++LI GLFK G   +  +L        +K ++V +++V+
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139

Query: 326 DAYVGIGDVGRAVQTYDRMLNGG--FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
                 G++ +A +  + M+  G    P++++Y+ LI    +  R+ EAC    ++    
Sbjct: 140 SGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAG 199

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFF 441
           + P +LT + L+ G CK G + +   + D M   G  PD +  + +I+ L   G  +   
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA 259

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
                M+  P+L  FNTL+DG C+       +++   M   NI PDVIT+T+L+ G+   
Sbjct: 260 EILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 319

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME----RNGVA-- 555
           G +  A  L  +++++G  PDVI Y++++ GL K   I     + K M     R GV   
Sbjct: 320 GQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMY 379

Query: 556 -----------------------------PDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
                                        P +  YN++L  LIK+ ++  A+ L   L  
Sbjct: 380 SSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA 439

Query: 587 RGLEPDIITYNTIICGYCSLN 607
           RG  PD++TYNT+I G C  N
Sbjct: 440 RGYVPDVVTYNTLIDGLCKAN 460



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/553 (24%), Positives = 254/553 (45%), Gaps = 93/553 (16%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVI 92
           N ++  L K  NP  A++ F+   +    P I     +I  L +S   + A  + ++M+ 
Sbjct: 101 NVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIR 160

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           + GK          S  D    Y+ LI  + R  +I E+      M   GI  +PD    
Sbjct: 161 KGGK----------SAPDI-VTYNTLINAFYRASRIREACAFREKMKAAGI--NPD---- 203

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           +++C                           L++G+ + G +E A  +   +   G VP+
Sbjct: 204 VLTC-------------------------NILVSGICKDGDVEEALEILDGMKLAGPVPD 238

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           ++T N I+  LC+ G++  A+   ++L  +   P++VTF+TL++ FCK   L +A ++  
Sbjct: 239 VITYNSIIHALCVAGKVVEAA---EILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLE 295

Query: 273 LMMEMDLVPDLIIYSI-----------------------------------LIDGLFKAG 297
            M   +++PD+I Y+I                                   L+DGL K+G
Sbjct: 296 EMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSG 355

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            ++E ++L+     RG +  VV++SS++  Y   G+V +A +    M++   +P + +Y+
Sbjct: 356 EIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYN 415

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           I++ GL + G + +A  L   ++ R   P ++TY++LIDG CK+ ++R+   L D M  R
Sbjct: 416 IVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASR 475

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G  P+ V    ++ GL     + DA     +  R    PN+ ++ +L+DG C+  R  D 
Sbjct: 476 GCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDA 535

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD-----VITYS 527
             +   M    +  D   +  LI  ++  G ++ A+ ++ +M+ RG  PD      +  +
Sbjct: 536 CMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 595

Query: 528 AIIHGLFKGKNIS 540
           A+ + +F+  N+ 
Sbjct: 596 AMSNSVFEWTNLE 608



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 160/361 (44%), Gaps = 32/361 (8%)

Query: 260 KEAKLEKAFQLYNLMMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           + ++ + A Q ++   E D    D+  Y+ L+D L K+G      ++    L  G   ++
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           V F  ++      G   RA++    +      P+V  +++LI GL + G   +A  LF  
Sbjct: 63  VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL 438
           +   R++P ++TY+++I G CKSG L     L + MI++G K                  
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKS----------------- 165

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
                       P++  +NTL++   R  R  +       M    I PDV+T  +L+ GI
Sbjct: 166 -----------APDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGI 214

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G +  A+ +   M   G  PDVITY++IIH L     +     + K M     +PD+
Sbjct: 215 CKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDL 271

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
             +N LL+   K   L  AL++  ++    + PD+ITY  ++ G C +    +  Y   +
Sbjct: 272 VTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEE 331

Query: 619 I 619
           I
Sbjct: 332 I 332


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 227/432 (52%), Gaps = 13/432 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN--ASSLFD 237
           V + L++ L  +G++++A     +V +    PN  TCN IL  LC+  +  +  A  LF+
Sbjct: 130 VVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHIL--LCLARERSSELAWRLFE 187

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            L    P PNV TF+ +I+  CKE  L +A  L   M  +   PD++ Y+ LIDG  K G
Sbjct: 188 QL----PAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCG 243

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            L+E  +L+      G + DVV ++++++ +   G + RA   +  M   G + NV+++S
Sbjct: 244 ELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFS 303

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
             +   C+ G + EA  LF Q+ ++ ++P+ +TY+ L+DG CK+G+L D   L + M+++
Sbjct: 304 TFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQ 363

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G+  + V  ++L++GL     + +A   F    R  +  N  ++ TL+ G    K +   
Sbjct: 364 GVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERA 423

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           + L   M    ++ DV  +  LI G+ +   L  A  L  +M + GL P+ + Y+ I+  
Sbjct: 424 LSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDA 483

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
            FK +  S  + + + M  +G  P+I  Y  L++ L K  ++D A+  F ++ D GLEP+
Sbjct: 484 CFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPN 543

Query: 593 IITYNTIICGYC 604
           +  Y  ++ G C
Sbjct: 544 VQAYTALVDGLC 555



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 239/487 (49%), Gaps = 5/487 (1%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLM 185
           G +D++V   A + ++ +  +      ++ CL    S    ++L   +       +  ++
Sbjct: 142 GLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAPNVFTFNIMI 201

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           + L ++G +  A  +  ++   G  P++VT N ++      G++     L   +   G +
Sbjct: 202 DFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCR 261

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+VVT++ L+N FCK  ++E+A+  +  M    ++ +++ +S  +D   K G ++E  +L
Sbjct: 262 PDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKL 321

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
                 +G+K + V ++ ++D     G +  A+   + M+  G   NV++Y++L+ GLC+
Sbjct: 322 FAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCK 381

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G++ EA  +F  +    +  + L Y++LI G           SL   M  +G++ D  +
Sbjct: 382 EGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSL 441

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
              LI GL     + +A     +     L PN  I+  +MD C + ++ ++ + L   M 
Sbjct: 442 YGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMM 501

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
               +P+++T+  L+ G+   GS+  AI  F +M+  GL P+V  Y+A++ GL K   + 
Sbjct: 502 DSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLD 561

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             + +   M   G++ D  +   L++  +K+ NL  A  L  ++ + GL+ D+  Y   +
Sbjct: 562 KAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFV 621

Query: 601 CGYCSLN 607
            G+C+LN
Sbjct: 622 WGFCNLN 628



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 239/497 (48%), Gaps = 17/497 (3%)

Query: 101 FRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           +RLF          ++ +I+   + G + E+  + A M  +G   SPD+V    + L+D 
Sbjct: 183 WRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGC--SPDVVT--YNSLIDG 238

Query: 161 ----NSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                 + +  KL   MRG G       Y  L+N   + G +E A+    ++ + G + N
Sbjct: 239 YGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMAN 298

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +VT +  +   C NG +  A  LF  + + G KPN VT++ L++  CK  +L+ A  L N
Sbjct: 299 VVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTN 358

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M++  +  +++ Y++L+DGL K G++ E  ++       G++ + +++++++  +    
Sbjct: 359 EMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYK 418

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           +  RA+     M + G   +V  Y  LI GLC   +L EA  L  ++    L+P+ + Y+
Sbjct: 419 NSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYT 478

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM 447
           +++D   K+ K  +  +L   M+  G +P+ V    L++GL     + +A+  F + V +
Sbjct: 479 NIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDL 538

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            L PN+  +  L+DG C+  R    V L   M    +  D +  T L+ G   QG+L  A
Sbjct: 539 GLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDA 598

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             L  +M+  GL  D+  Y+  + G      I     +   M  NG+ PD  +YN L+N 
Sbjct: 599 FALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINK 658

Query: 568 LIKECNLDAALKLFGQL 584
             K  N++ A  L  ++
Sbjct: 659 CQKLGNMEEAAILQNEM 675



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 205/419 (48%), Gaps = 17/419 (4%)

Query: 200 MHRQVI----QRGFVPNIVTCNKILKRLCINGQIGNAS-SLFDVLLLVGPKPNVVTFSTL 254
           +HR  +    +R  +P++V  + +L  L   G + +A  +L  V  L  P PN  T + +
Sbjct: 113 LHRAALALGPRRSALPSVV--DTLLSLLADRGLLDDAVLALARVRELRVP-PNTRTCNHI 169

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           +    +E   E A++L+    E    P++  ++I+ID L K G L E   LL      G 
Sbjct: 170 LLCLARERSSELAWRLF----EQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGC 225

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             DVV ++S++D Y   G++    +    M   G  P+V++Y+ L+   C+ GR+  A  
Sbjct: 226 SPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYS 285

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
            F ++    +  +++T+S+ +D FCK+G +R+   L+  M  +G+KP+ V  + L++G  
Sbjct: 286 YFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTC 345

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               + DAL    + V+  +  N+  +  L+DG C+  +  +   +F LM    I+ + +
Sbjct: 346 KAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANEL 405

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
            +T LI G     +   A+ L  +M  +G+  DV  Y A+I GL   + +     +   M
Sbjct: 406 LYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKM 465

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +  G+ P+  IY  +++   K      A+ L  ++ D G  P+I+TY  ++ G C   S
Sbjct: 466 DECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGS 524


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 147/634 (23%), Positives = 291/634 (45%), Gaps = 65/634 (10%)

Query: 24  KTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHN--CVSSPNIAQLI--HVLLQSDM 79
           +T  S L  +Q + IL +L + +N   A+  F    N        ++  I  HV+ +   
Sbjct: 72  QTLASVLNTHQVDQILLSL-RVDNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQ 130

Query: 80  RDVASHVFDKMVIQ--FGKTYNFFRLFRDSLGDFGCD---YSFLIENYVRIGKIDESVEI 134
                 V ++MV +   G   +   L  +S  D+  +   +  L   Y R   + +++ +
Sbjct: 131 SKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFV 190

Query: 135 FAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLR 190
            A M  + + +S      L+  L  ++ +   Y     ++  G    E+    L++GL R
Sbjct: 191 LAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYN---EIKASGVPQNEYTNPILIDGLCR 247

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
           +  +++A    R+     F P++V+ N ++   C  G +  A S F +++  G  P+V +
Sbjct: 248 QSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYS 307

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           ++ L++  C    +E+A +  N M    + PD++ Y+IL +G    G +    +++   L
Sbjct: 308 YNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRML 367

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
             GL  D+V ++ ++  +  +G++  + +  ++ML+ G   ++++Y++L+  LC+ GR+ 
Sbjct: 368 LNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           EA  L  ++ +  L+P LLTYS         G + +   LY+ M  + + P++ VCS +I
Sbjct: 428 EAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAII 479

Query: 431 NGL----------------------------------------MGDALRFFFQSVRMTLI 450
           +GL                                        +G+A+R + Q +   + 
Sbjct: 480 SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 539

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P +  FN+L+ G C+  +  + VKL   + ++ + P  +T+T L+ G   +G + S   +
Sbjct: 540 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 599

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
             +M  + + P  ITY+ ++ GL K   +   + + K M   G+ PD   YN ++    K
Sbjct: 600 LHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCK 659

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             +L  A +L  Q+    L+P  +TYN +I G C
Sbjct: 660 AHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLC 693



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 205/430 (47%), Gaps = 13/430 (3%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++GL   G +E A      +   G  P+IVT N +     I G I  A  +   +L
Sbjct: 308 YNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRML 367

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L G  P++VT++ LI   C+   +E++F+L   M+   L   ++ Y++L+  L K+GR+ 
Sbjct: 368 LNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   LL      GLK D++ +S         G V  A++ Y+ M +    PN    S +I
Sbjct: 428 EAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAII 479

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GL ++G + EA   F  V    +   ++ Y+ +IDG+ K G + +    Y  +I++G+ 
Sbjct: 480 SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 539

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P  V  + LI G      + +A++         L+P    + TLM+G C          +
Sbjct: 540 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 599

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M    IKP  IT+TV+++G+  +G L  ++ L   M  RGL PD ITY+ +I    K
Sbjct: 600 LHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCK 659

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
             ++     +   M ++ + P    YNVL+N L    NL  A +L   L D+ +    + 
Sbjct: 660 AHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVA 719

Query: 596 YNTIICGYCS 605
           Y TII  +C+
Sbjct: 720 YTTIIKAHCA 729



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/523 (23%), Positives = 250/523 (47%), Gaps = 56/523 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ L+      G ++E++E    M + G+   PD+V    L +       +   +K+ + 
Sbjct: 308 YNILLHGLCVAGSMEEALEFTNDMENHGV--EPDIVTYNILANGFRILGLISGAWKVVQR 365

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  L+ G  + G IE +F +  +++ +G   +IVT   +L  LC +G+
Sbjct: 366 MLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGR 425

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  L   + ++G KP+++T+S           +E+A +LY  M    + P+  + S 
Sbjct: 426 IDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPNSFVCSA 477

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I GLF+ G + E      +     +  ++++++ ++D Y  +G++G AV++Y +++  G
Sbjct: 478 IISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG 537

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P +++++ LI G C++G+L EA  L   + +  L P+ +TY++L++G+C+ G +   F
Sbjct: 538 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 597

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +   M  + +KP  +  ++++ GL     + ++++         L P+   +NT++   
Sbjct: 598 DMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 657

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI------------------------- 498
           C+        +L   M  ++++P  +T+ VLI G+                         
Sbjct: 658 CKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTK 717

Query: 499 ----------ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
                      ++G + +A++ F QM++RG    +  YSA+I+ L K   I+     F +
Sbjct: 718 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCM 777

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           M  +G+ PD  I  V+LN   +  + ++  ++F  +   GL P
Sbjct: 778 MLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 177/346 (51%), Gaps = 9/346 (2%)

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           + S +F+K  I   + Y F  + +  + +    Y+ +I+ Y ++G I E+V  +  + + 
Sbjct: 478 IISGLFEKGAISEAQMY-FDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEK 536

Query: 142 GIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIE 195
           GI  SP +V    L+        + +  KL   ++  G       Y  LMNG   +G + 
Sbjct: 537 GI--SPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH 594

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           + F M  ++  +   P  +T   ++K LC  G++  +  L   +   G  P+ +T++T+I
Sbjct: 595 SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 654

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
            +FCK   L+KAFQL+N M++  L P  + Y++LI+GL   G LK+ + LL+T  D+ ++
Sbjct: 655 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIR 714

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           L  V +++++ A+   GDV  A+  + +M+  GF  ++  YS +I  LC++  + +A   
Sbjct: 715 LTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFF 774

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           F  +L   + P       +++ F +SG     F ++  MIK GL P
Sbjct: 775 FCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 32/298 (10%)

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           Y+ +   G   N  +  ILI GLC+Q RL +A     +       PS++++++L+ GFCK
Sbjct: 223 YNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCK 282

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
            G +    S +  MIK GL PD    ++L++GL     M +AL F        + P++  
Sbjct: 283 MGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVT 342

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N L +G   L   +   K+   M +  + PD++T+T+LI G    G++  +  L  +ML
Sbjct: 343 YNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKML 402

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN------------- 562
            +GL   ++TY+ ++  L K   I   + +   ME  G+ PD+  Y+             
Sbjct: 403 SQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEE 462

Query: 563 --------------VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
                          +++ L ++  +  A   F  +T   +  +II YN +I GY  L
Sbjct: 463 MCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKL 520



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 3/195 (1%)

Query: 423 AVVCSLLINGLMGDALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           A   SLL N    D +   +  ++ + +P N +    L+DG CR  R  D V      G 
Sbjct: 204 ATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGG 263

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
               P V++   L+ G    GS+  A   F  M+K GL PDV +Y+ ++HGL    ++  
Sbjct: 264 EEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEE 323

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L     ME +GV PDI  YN+L N       +  A K+  ++   GL PD++TY  +IC
Sbjct: 324 ALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILIC 383

Query: 602 GYCSLNSCLIDGYFK 616
           G+C + +  I+  FK
Sbjct: 384 GHCQMGN--IEESFK 396


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 220/470 (46%), Gaps = 39/470 (8%)

Query: 174 RGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           RG    VY F  +M        +++A  + R + + G VPN +    ++  L  N ++  
Sbjct: 194 RGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNE 253

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV----------- 280
           A  L + + L+G +P+V TF+ +I+  CK  ++ +A +L++ M+  D             
Sbjct: 254 AMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMH 313

Query: 281 --------------------PDLIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVV 319
                               P+ ++Y+ LI+G   +GR +E  +LL   +   G + D  
Sbjct: 314 GLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAF 373

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            F+ ++D     G +  A++  D M+  GF PNVI+Y+ILI G C+QG   EA  +   +
Sbjct: 374 TFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM 433

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
             + L  + + Y+ LI   CK GK++D   +Y  M  +G KPD    + LI GL     M
Sbjct: 434 SAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKM 493

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +AL  +   +   +I N   +NTL+    RL+      KL   M       D IT+  L
Sbjct: 494 EEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGL 553

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I+ +   G+    + L  QM    + P + + + +I+   +   ++  L   + M + G+
Sbjct: 554 IKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL 613

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            PDI  YN L+N L K      AL LF  L  +G+ PD +TYNT+I  YC
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYC 663



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 246/508 (48%), Gaps = 20/508 (3%)

Query: 115 YSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           Y+F  +++ +  + ++D +  +   M+  G   +  + Q L+  L ++N V +  KL   
Sbjct: 201 YTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEE 260

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       +  +++GL + G I  A  +H +++ R F  + +    ++  LC  G+
Sbjct: 261 MFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGK 320

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL-YNLMMEMDLVPDLIIYS 287
           +  A ++   +    P PN V ++TLIN +    + E+A  L Y  M+     PD   ++
Sbjct: 321 VDEARAMLSKI----PNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFN 376

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I+IDGL K G L    E L   + +G + +V+ ++ ++D +   G    A +  + M   
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAK 436

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G   N + Y+ LI  LC+ G++ +A  ++G++  +  +P + T++SLI G CK+ K+ + 
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQS------VRMTLIP-NLFIFNTLM 460
             LY +M+  G+  + V  + LI+  +   L    Q+      +R    P +   +N L+
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFL--RLELIQQADKLVGEMRFRGCPLDNITYNGLI 554

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
              C+       + L   M    I P + +  +LI      G ++ A+     M++RGLT
Sbjct: 555 KALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLT 614

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD++TY+++I+GL K       L++F  ++  G+ PD   YN L++    E   + A +L
Sbjct: 615 PDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQL 674

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLNS 608
             +    G  P+ IT++ +I  +   NS
Sbjct: 675 LFKGVSNGFIPNEITWSILINYFVKNNS 702



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 205/422 (48%), Gaps = 15/422 (3%)

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           F P   + N +L+ L        A ++F  +L  G  P V TF  ++ AFC   +++ A 
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            L   M +   VP+ IIY +LI  L +  R+ E  +LL      G + DV  F+ V+   
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G +  A + +DRML   F  + +    L+ GLC+ G++ EA  +  ++      P+ 
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNT 336

Query: 389 LTYSSLIDGFCKSGKLRDGFSL-YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           + Y++LI+G+  SG+  +   L Y NM+  G +PDA   +++I+GL     +  AL F  
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLD 396

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           + V+    PN+  +  L+DG C+     +  K+   M    +  + + +  LI  +   G
Sbjct: 397 EMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDG 456

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A+ ++ +M  +G  PD+ T++++I+GL K   +   L +++ M   GV  +   YN
Sbjct: 457 KIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYN 516

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC-----LIDGYFKS 617
            L++  ++   +  A KL G++  RG   D ITYN +I   C   +      LI+  F  
Sbjct: 517 TLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGE 576

Query: 618 QI 619
           +I
Sbjct: 577 EI 578



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 222/471 (47%), Gaps = 49/471 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI       +++E++++   M  MG          ++  L  +  + +  KL   M 
Sbjct: 238 YQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRML 297

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            + F     +  +LM+GL R G ++ A    R ++ +   PN V  N ++    ++G+  
Sbjct: 298 LRDFTADALIQGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLINGYVVSGRFE 353

Query: 231 NASSL-FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            A  L +  +++ G +P+  TF+ +I+  CK+  L  A +  + M++    P++I Y+IL
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDG  K G  +E ++++ +   +GL L+ V ++ ++ A    G +  A+Q Y  M + G 
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGC 473

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF----------- 398
            P++ +++ LI GLC+  ++ EA GL+  +L+  +  + +TY++LI  F           
Sbjct: 474 KPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK 533

Query: 399 ------------------------CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN--- 431
                                   CK+G       L + M    + P    C++LIN   
Sbjct: 534 LVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFC 593

Query: 432 --GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
             G + DAL+F    ++  L P++  +N+L++G C++ R  + + LF  +    I PD +
Sbjct: 594 RTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAV 653

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
           T+  LI     +G  + A  L F+ +  G  P+ IT+S +I+   K  + S
Sbjct: 654 TYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDS 704



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 142/301 (47%), Gaps = 6/301 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ + + G  +E+ ++   MS  G+ L+      L+  L     +    ++   M 
Sbjct: 410 YTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMS 469

Query: 175 GKGFC---VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            KG C   +Y F  L+ GL +   +E A  ++R ++  G + N VT N ++        I
Sbjct: 470 SKG-CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  L   +   G   + +T++ LI A CK    EK   L   M   ++ P +   +IL
Sbjct: 529 QQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNIL 588

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I+   + G++ +  + L   + RGL  D+V ++S+++    +G    A+  ++ +   G 
Sbjct: 589 INSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI 648

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+ ++Y+ LI   C +G   +AC L  + +     P+ +T+S LI+ F K+    + F+
Sbjct: 649 HPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFT 708

Query: 410 L 410
           +
Sbjct: 709 I 709


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 156/581 (26%), Positives = 271/581 (46%), Gaps = 76/581 (13%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFG-CDYSFLIENYVRI-----GKIDESVEIFA 136
           A HVFD++ ++ G+  + + L R +L D      +  +  Y R+     GK+  +V  +A
Sbjct: 34  ARHVFDEL-LRRGRGASIYGLNR-ALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 91

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKG 192
                           L+ C   ++ +   +     +  KGF V    +  L+ GL    
Sbjct: 92  I---------------LIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADK 136

Query: 193 VIENAFHM-HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL---LVGPKPNV 248
              +A  +  R++ +   +P++ +C  +LK LC   +   A  L  ++      G  P+V
Sbjct: 137 RTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDV 196

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           V+++T+IN F KE    KA+  Y+ M++  + PD++ YS +I  L K   + +  E+L +
Sbjct: 197 VSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTS 256

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAV--------------------QTY------- 341
            +  G+  +   ++S+M  Y   G    A+                     TY       
Sbjct: 257 MVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGY 316

Query: 342 -------------DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
                        D M+  G  P+   Y+ILI    +QG++ EA  +F ++  + L P  
Sbjct: 317 ATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDA 376

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +TY ++I   CKSG++ D    ++ MI  GL P  +V + LI+GL        A     +
Sbjct: 377 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 436

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            +   +  N   FN+++D  C+  R  ++ KLF LM    +KPD+IT++ LI G    G 
Sbjct: 437 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 496

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A+ L   M+  GL P+ +TY  +I+G  K   +   L +FK ME +GV+PDI  YN+
Sbjct: 497 MDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNI 556

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +L  L +     AA +L+ ++T+ G + ++ TYN I+ G C
Sbjct: 557 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 597



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 224/468 (47%), Gaps = 23/468 (4%)

Query: 160 SNSVGQYYKLCRAMRGK---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
           + +V +Y ++ RA  GK       Y  L+    R   ++  F     V+++GF    +T 
Sbjct: 66  AAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITF 125

Query: 217 NKILKRLCINGQIGNASSLFDVLLL----VGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
             +LK LC + +  +A    D++L     +   P+V + + L+   C E + ++A +L +
Sbjct: 126 TPLLKGLCADKRTSDA---MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPH 182

Query: 273 LMMEM---DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +M +       PD++ Y+ +I+G FK G   +        LDR +  DVV +SS++ A  
Sbjct: 183 MMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALC 242

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-----L 384
               + +A++    M+  G +PN  +Y+ ++ G C  G+  EA G   +V         L
Sbjct: 243 KGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGL 302

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALR 439
           EP + TY +L+ G+   G L    +L D M++ G+ PD  V ++LI      G + +A+ 
Sbjct: 303 EPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAML 362

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F +  +  L P+   +  ++   C+  R  D +  F  M    + P  I +  LI G+ 
Sbjct: 363 VFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 422

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
           +      A  L  +ML RG+  + I +++II    K   +     +F LM R GV PDI 
Sbjct: 423 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 482

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            Y+ L++       +D A+KL   +   GL+P+ +TY T+I GYC ++
Sbjct: 483 TYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKIS 530



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 232/465 (49%), Gaps = 17/465 (3%)

Query: 153 LMSCLVDSNSVGQYYKLCRAM---RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVI 205
           L+  L D N   +  +L   M   RG G       Y  ++NG  ++G    A+  + +++
Sbjct: 164 LLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEML 223

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            R   P++VT + I+  LC    +  A  +   ++  G  PN  T++++++ +C   + +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPK 283

Query: 266 KAF----QLYNLMMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
           +A     ++ +  +E D L PD+  Y  L+ G    G L   + LL   +  G+  D  V
Sbjct: 284 EAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYV 343

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           ++ ++ AY   G V  A+  + +M   G  P+ ++Y  +I  LC+ GR+ +A   F Q++
Sbjct: 344 YNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMI 403

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMG 435
              L P  + Y+SLI G C   K      L   M+ RG+  + +  + +I+     G + 
Sbjct: 404 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 463

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           ++ + F   VR+ + P++  ++TL+DG C   +  + +KL   M    +KP+ +T+  LI
Sbjct: 464 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLI 523

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G      +  A++LF +M   G++PD+ITY+ I+ GLF+ +  +    ++  +  +G  
Sbjct: 524 NGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 583

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            +++ YN++L+ L K    D AL++F  L    L+ +  T+N +I
Sbjct: 584 IELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMI 628



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 241/503 (47%), Gaps = 19/503 (3%)

Query: 111 FGCDYSFLIENYVRIGKIDESVEIFAYMSD-MGIYLSPDLVQ--RLMSCLVDSNSVGQYY 167
           F C  + L++      +  E++E+   M+D  G   +PD+V    +++        G+ Y
Sbjct: 159 FSC--TILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAY 216

Query: 168 KLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
                M  +        Y  ++  L +   ++ A  +   +++ G +PN  T   I+   
Sbjct: 217 STYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGY 276

Query: 224 CINGQIGNASSLF-----DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           C +GQ   A         D +   G +P++ T+ TL+  +  +  L     L +LM+   
Sbjct: 277 CSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNG 336

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           + PD  +Y+ILI    K G++ E   +      +GL  D V + +V+      G V  A+
Sbjct: 337 IHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAM 396

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             +++M++ G  P  I Y+ LI GLC   +   A  L  ++L R +  + + ++S+ID  
Sbjct: 397 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 456

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           CK G++ +   L+D M++ G+KPD +  S LI+G      M +A++     V + L PN 
Sbjct: 457 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNT 516

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             + TL++G C++ R  D + LF  M    + PD+IT+ ++++G+      ++A  L+ +
Sbjct: 517 VTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 576

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           + + G   ++ TY+ I+HGL K K     L MF+ +    +  +   +N++++ L+K   
Sbjct: 577 ITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGR 636

Query: 574 LDAALKLFGQLTDRGLEPDIITY 596
              A  LF   +  GL P+  TY
Sbjct: 637 NGEAKDLFVAFSSNGLVPNYWTY 659



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 218/485 (44%), Gaps = 30/485 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    +   +D+++E+   M   G+  +      +M     S    +     + +R
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVR 293

Query: 175 GKG---------FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
             G            Y  L+ G   KG +     +   +++ G  P+    N ++     
Sbjct: 294 SDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAK 353

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            G++  A  +F  +   G  P+ VT+  +I   CK  ++E A   +  M++  L P  I+
Sbjct: 354 QGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 413

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LI GL    + +   EL+L  LDRG+ L+ + F+S++D++   G V  + + +D M+
Sbjct: 414 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 473

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  P++I+YS LI G C  G++ EA  L   ++   L+P+ +TY +LI+G+CK  ++ 
Sbjct: 474 RIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMG 533

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI---------- 455
           D   L+  M   G+ PD +  ++++ GL        FQ+ R      L++          
Sbjct: 534 DALVLFKEMESSGVSPDIITYNIILQGL--------FQTRRTAAAKELYVRITESGTQIE 585

Query: 456 ---FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              +N ++ G C+ K   D +++F  + + ++K +  T  ++I  +   G    A  LF 
Sbjct: 586 LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFV 645

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
                GL P+  TY  +   +     +     +F  ME NG   D  + N ++  L++  
Sbjct: 646 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 705

Query: 573 NLDAA 577
            +  A
Sbjct: 706 EITRA 710



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 120/502 (23%), Positives = 236/502 (47%), Gaps = 18/502 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  + + G   ++   +  M D  I  SPD+V    +++ L    ++ +  ++  +
Sbjct: 199 YTTVINGFFKEGDSGKAYSTYHEMLDRRI--SPDVVTYSSIIAALCKGQAMDKAMEVLTS 256

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRG-----FVPNIVTCNKILKRL 223
           M   G       Y  +M+G    G  + A    ++V   G       P+I T   +L+  
Sbjct: 257 MVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGY 316

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
              G +    +L D+++  G  P+   ++ LI A+ K+ K+++A  +++ M +  L PD 
Sbjct: 317 ATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDA 376

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + Y  +I  L K+GR+++        +D GL    +V++S++          RA +    
Sbjct: 377 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 436

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           ML+ G   N I ++ +I   C++GR++E+  LF  ++   ++P ++TYS+LIDG+C +GK
Sbjct: 437 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 496

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
           + +   L   M+  GLKP+ V    LING      MGDAL  F +     + P++  +N 
Sbjct: 497 MDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNI 556

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G  + +R     +L++ +     + ++ T+ +++ G+        A+ +F  +    
Sbjct: 557 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 616

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           L  +  T++ +I  L K         +F     NG+ P+   Y ++   +I +  L+   
Sbjct: 617 LKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 676

Query: 579 KLFGQLTDRGLEPDIITYNTII 600
           +LF  + D G   D    N I+
Sbjct: 677 QLFLSMEDNGCTVDSGMLNFIV 698



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 48/238 (20%), Positives = 96/238 (40%), Gaps = 44/238 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV------QRLMSCLVDSNSVGQYYK 168
           Y  LI  Y +I ++ +++ +F  M   G+  SPD++      Q L      + +   Y +
Sbjct: 519 YRTLINGYCKISRMGDALVLFKEMESSGV--SPDIITYNIILQGLFQTRRTAAAKELYVR 576

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  +        Y  +++GL +  + ++A  M                            
Sbjct: 577 ITESGTQIELSTYNIILHGLCKNKLTDDALRM---------------------------- 608

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
                  F  L L+  K    TF+ +I+A  K  +  +A  L+       LVP+   Y +
Sbjct: 609 -------FQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRL 661

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + + +   G L+E ++L L+  D G  +D  + + ++   +  G++ RA  TY  M++
Sbjct: 662 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMID 718


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 244/510 (47%), Gaps = 13/510 (2%)

Query: 105 RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNS 162
           RD +      Y+  I  Y R   +D++  ++  M   G+   PD+V    L+  L     
Sbjct: 237 RDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVL--PDVVTLSALVGGLCKDGR 294

Query: 163 VGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
             + Y L R M   G       Y  L++ L +      +  +  +V+ RG V +++    
Sbjct: 295 FSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTA 354

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++  LC  G+I  A  +F   L     PN VT++ LI+A CK   ++ A Q+ + M E  
Sbjct: 355 LMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS 414

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           + P+++ +S +I+GL K G + +  + +    +RG+  +VV + +V+D          A+
Sbjct: 415 ISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAAL 474

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             Y  ML  G   N      L+ GL + G++ +A  LF ++  R +    + Y++LIDG 
Sbjct: 475 DVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGL 534

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNL 453
            K+G L   F +   + ++ L PDAVV ++ IN     G   +A  F  +     L P+ 
Sbjct: 535 FKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQ 594

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +NT++    R  +    +KL   M   +IKP++IT++ LI G+   G++  A  L  +
Sbjct: 595 VTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNE 654

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M   G +P  +T+  ++    +G+   + L + + M   G+  DI +YN L+ +L     
Sbjct: 655 MSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGM 714

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              A+ +  +++ RG+ PD IT+N +I G+
Sbjct: 715 TRKAMVVLEEMSGRGIAPDTITFNALILGH 744



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 239/492 (48%), Gaps = 15/492 (3%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLCRAMRGKGFC 179
           R G++D +  +   M   G     D+V    + LVD       +   + +   M+ +G  
Sbjct: 149 RDGRVDRAAALAEVMVRGGGIGGLDVVG--WNSLVDGYCKVGDMETAFAVAERMKAQGVG 206

Query: 180 V----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           V    Y  L+ GL R G ++ A  M   + + G  PN+VT    +   C    + +A SL
Sbjct: 207 VDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSL 266

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           ++ ++  G  P+VVT S L+   CK+ +  +A+ L+  M ++   P+ + Y +LID L K
Sbjct: 267 YEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAK 326

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           A R  E   LL   + RG+ +D+++++++MD     G +  A   +   L+    PN ++
Sbjct: 327 AQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVT 386

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y++LI  LC+ G +  A  +  ++  + + P+++T+SS+I+G  K G +         M 
Sbjct: 387 YTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMK 446

Query: 416 KRGLKPDAVVCSLLING---LMGD--ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +RG+ P+ V    +I+G    +G   AL  + + +   +  N FI ++L++G  +  +  
Sbjct: 447 ERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIE 506

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
               LF  M    +  D + +T LI G+   G+L +A  +  ++ ++ L PD + Y+  I
Sbjct: 507 KAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFI 566

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           + L             + M+  G+ PD   YN ++    +E     ALKL   +    ++
Sbjct: 567 NCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIK 626

Query: 591 PDIITYNTIICG 602
           P++ITY+T+I G
Sbjct: 627 PNLITYSTLIVG 638



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 222/444 (50%), Gaps = 19/444 (4%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  +M+G   +G +     +  ++ +RG   + VT N +L  LC +G++  A++L +V++
Sbjct: 106 YNVVMSGFSEQGGLAPEALLA-EMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMV 164

Query: 241 LVGP--KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
             G     +VV +++L++ +CK   +E AF +   M    +  D++ Y+ L+ GL +AG 
Sbjct: 165 RGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGE 224

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +    +++ T    G++ +VV ++  +  Y     V  A   Y+ M+  G LP+V++ S 
Sbjct: 225 VDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSA 284

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ GLC+ GR  EA  LF ++      P+ +TY  LID   K+ +  +  SL   ++ RG
Sbjct: 285 LVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRG 344

Query: 419 LKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           +  D ++ + L++     G + +A   F  ++     PN   +  L+D  C+        
Sbjct: 345 VVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAE 404

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           ++   M   +I P+V+T + +I G+  +G +  A     +M +RG+ P+V+TY  +I G 
Sbjct: 405 QVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGS 464

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           FK       L ++  M   GV  +  I + L+N L K   ++ A  LF ++ +RG+  D 
Sbjct: 465 FKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDH 524

Query: 594 ITYNTIICGYCSLNSCLIDGYFKS 617
           + Y T           LIDG FK+
Sbjct: 525 VNYTT-----------LIDGLFKT 537



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 249/528 (47%), Gaps = 19/528 (3%)

Query: 95  GKTYNFFRLFRDSLGDF----GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           GK      +FR +L D     G  Y+ LI+   + G +D + ++ + M +  I  SP++V
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSI--SPNVV 420

Query: 151 --QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
               +++ LV    VG+     R M+ +G       Y  +++G  +    E A  ++ ++
Sbjct: 421 TFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEM 480

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           +  G   N    + ++  L  NG+I  A +LF  +   G   + V ++TLI+   K   L
Sbjct: 481 LCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNL 540

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
             AF++   + E +L+PD ++Y++ I+ L   G+ KE    L      GLK D V ++++
Sbjct: 541 PAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTM 600

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           + A    G   +A++  + M      PN+I+YS LI GL + G + +A  L  ++     
Sbjct: 601 IAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGF 660

Query: 385 EPSLLTYSSLIDGFCKSGKLRD-GFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDAL 438
            P+ LT+  ++   C  G+  D    +++ M+  GL  D  V + L+     NG+   A+
Sbjct: 661 SPTSLTHRRVLQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAM 719

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
               +     + P+   FN L+ G  +     +    +  M  + I P+V T   L+ G+
Sbjct: 720 VVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGL 779

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
            S G +  + ++  +M KRG+ P  +TY  ++ G  K  N    + ++  M   G  P +
Sbjct: 780 ESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKV 839

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + YN L++   K   +  A +LF ++ +RG+ P   TY+ ++ G+  L
Sbjct: 840 STYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKL 887



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/521 (22%), Positives = 239/521 (45%), Gaps = 10/521 (1%)

Query: 93  QFGKTYNFFR-LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           +F + Y  FR + +         Y  LI+   +  + +ES+ +   +   G+ +   +  
Sbjct: 294 RFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYT 353

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            LM  L     + +   + R             Y  L++ L + G ++ A  +  ++ ++
Sbjct: 354 ALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEK 413

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
              PN+VT + I+  L   G +G A+     +   G  PNVVT+ T+I+   K    E A
Sbjct: 414 SISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAA 473

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             +Y+ M+   +  +  I   L++GL K G++++   L     +RG+ LD V +++++D 
Sbjct: 474 LDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDG 533

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G++  A +    +     LP+ + Y++ I  LC  G+  EA     ++    L+P 
Sbjct: 534 LFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPD 593

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQ 443
            +TY+++I    + GK      L + M +  +KP+ +  S LI GL      +  ++   
Sbjct: 594 QVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLN 653

Query: 444 SVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
            +  +   P       ++  C + +R+   +++   M    +  D+  +  L+R +   G
Sbjct: 654 EMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNG 713

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
               A+++  +M  RG+ PD IT++A+I G FK  ++      +  M  +G++P++A +N
Sbjct: 714 MTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFN 773

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            LL  L     +  +  +  ++  RG+EP  +TY+ ++ GY
Sbjct: 774 TLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGY 814



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 254/573 (44%), Gaps = 66/573 (11%)

Query: 42  LIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSD--------MRDVASHVFDKM 90
           L K  N   A Q          SPN+   + +I+ L++          MR++     D  
Sbjct: 394 LCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPN 453

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           V+ +G   +         G F C           +G+ + +++++  M   G+ ++  +V
Sbjct: 454 VVTYGTVID---------GSFKC-----------LGQ-EAALDVYHEMLCEGVEVNKFIV 492

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L++ L  +  + +   L R M  +G  +    Y  L++GL + G +  AF + +++ +
Sbjct: 493 DSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTE 552

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +  +P+ V  N  +  LC+ G+   A S  + +   G KP+ VT++T+I A  +E K  K
Sbjct: 553 KNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAK 612

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A +L N M    + P+LI YS LI GLF+AG +++   LL      G     +    V+ 
Sbjct: 613 ALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ 672

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A          ++ ++ M+N G   ++  Y+ L++ LC  G   +A  +  ++  R + P
Sbjct: 673 ACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAP 732

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
             +T+++LI G  KSG L + FS YD M+  G+ P                         
Sbjct: 733 DTITFNALILGHFKSGHLDNAFSTYDQMLYHGISP------------------------- 767

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
                N+  FNTL+ G     R  ++  +   M    I+P  +T+ +L+ G   Q +   
Sbjct: 768 -----NVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVE 822

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A+ L+ +M+ +G  P V TY+A+I    K   +S    +F  M+  GV P    Y++L++
Sbjct: 823 AVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVS 882

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              K  N     K    + ++G  P   T ++I
Sbjct: 883 GWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSI 915



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/429 (23%), Positives = 180/429 (41%), Gaps = 44/429 (10%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L+    + GKI+++  +F  M++ G+ L       L+  L  + ++   +K+ + +  K 
Sbjct: 495 LVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKN 554

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                 VY   +N L   G  + A     ++   G  P+ VT N ++      G+   A 
Sbjct: 555 LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL 614

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA-------------------------- 267
            L + +     KPN++T+STLI    +   +EKA                          
Sbjct: 615 KLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQAC 674

Query: 268 ---------FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
                     +++  MM   L  D+ +Y+ L+  L   G  ++   +L     RG+  D 
Sbjct: 675 SQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDT 734

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           + F++++  +   G +  A  TYD+ML  G  PNV +++ L+ GL   GR+ E+  +  +
Sbjct: 735 ITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNE 794

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GL 433
           +  R +EPS LTY  L+ G+ K     +   LY  M+ +G  P     + LI+     G+
Sbjct: 795 MKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGM 854

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           M  A   F +     ++P    ++ L+ G  +L+  T+  K    M      P   T + 
Sbjct: 855 MSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSS 914

Query: 494 LIRGIASQG 502
           + R  +  G
Sbjct: 915 ISRAFSKPG 923



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 148/334 (44%), Gaps = 35/334 (10%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D + Y++++ G  + G L     LL     RG+  D V  ++V+      G V RA    
Sbjct: 102 DTVSYNVVMSGFSEQGGLAP-EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 342 DRMLNGGFLP--NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
           + M+ GG +   +V+ ++ L+ G C+ G +  A  +  ++  + +   ++ Y+SL+ G C
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           ++G++     + D M + G++P+ V  ++ I       + +                   
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFI-------VEY------------------- 254

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
               CR     D   L+  M    + PDV+T + L+ G+   G  S A  LF +M K G 
Sbjct: 255 ----CRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGA 310

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P+ +TY  +I  L K +  +  L +   +   GV  D+ +Y  L++ L KE  +D A  
Sbjct: 311 APNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKD 370

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
           +F         P+ +TY  +I   C   +  +DG
Sbjct: 371 MFRHALSDNHTPNGVTYTVLIDALCKAGN--VDG 402


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 209/430 (48%), Gaps = 16/430 (3%)

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           + GL+++G ++ A  +   +   G  P ++ CN ++K+LC +G++ +A  + + L   GP
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GP 124

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
              ++T++T++N +C+   ++ A ++ +    +   PD   Y+ LI  L   G + +   
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMID---SVPFAPDTFTYNPLIRALCVRGCVLDALA 181

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +    L RG    VV +S ++DA        +AV   D M + G  P++++Y++LI  +C
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-- 422
            QG + EA  +   +     +P  +TY+ ++   C S +  +   L   M      PD  
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEV 301

Query: 423 ---AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF--- 476
              AV+ SL   G +G A +   Q       P++  ++++MDG C+ +R  + +KL    
Sbjct: 302 TFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL 361

Query: 477 -MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG-LF 534
              M   N  PD +T   +I  +  +G    AI +  +M + G  PD+ TY+ I+ G L 
Sbjct: 362 LAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLC 421

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K       L +  LM  NG+ PD   Y  L   L +E  ++ A+ +F ++   GL PD +
Sbjct: 422 KSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKM 481

Query: 595 TYNTIICGYC 604
            YN I+ G C
Sbjct: 482 LYNAILLGLC 491



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 209/416 (50%), Gaps = 13/416 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG  R G I+ A  M   V    F P+  T N +++ LC+ G + +A ++FD +
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLIRALCVRGCVLDALAVFDDM 186

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G  P+VVT+S L++A CKE+  ++A  L + M      PD++ Y++LI+ +   G +
Sbjct: 187 LHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDV 246

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  ++L +    G K D V ++ V+ +         A +   +M +    P+ ++++ +
Sbjct: 247 GEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAV 306

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD----NMI 415
           I  LCQ+G +  A  +  Q+      P ++TYSS++DG CK  ++ +   L       M+
Sbjct: 307 ITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMV 366

Query: 416 KRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG-CCRLKRA 469
            +   PD V     + SL   GL   A++   +      IP++  +N ++DG  C+  + 
Sbjct: 367 SKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKT 426

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            + + L  LM    + PD  T+  L  G++ +  +  AI +F ++   GL+PD + Y+AI
Sbjct: 427 EEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAI 486

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           + GL K     + +  F  M  NG  PD + Y +L+  +  E  L+ A +L G L+
Sbjct: 487 LLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLS 542



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 17/217 (7%)

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI- 455
           G  + G+L     L  ++   G  P  + C++LI  L  D      + V   L P+  I 
Sbjct: 70  GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSATII 129

Query: 456 -FNTLMDGCCRL------KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
            +NT+++G CR       +R  D+V            PD  T+  LIR +  +G +  A+
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMIDSVPF---------APDTFTYNPLIRALCVRGCVLDAL 180

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +F  ML RG +P V+TYS ++    K       + +   M   G  PDI  YNVL+N +
Sbjct: 181 AVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAM 240

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             + ++  ALK+   L   G +PD +TY  ++   CS
Sbjct: 241 CSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCS 277


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 157/605 (25%), Positives = 292/605 (48%), Gaps = 60/605 (9%)

Query: 12  WRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLI 71
           W+   +   +ESK  +SD+    A+ ++    + ++   A++FF W     + P    L 
Sbjct: 41  WQDSLESRFAESKVVVSDV----AHFVID---RVHDAELALKFFDWAS---TRPFSCSLD 90

Query: 72  HVLLQSDMRDVAS-HVFDK--MVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKI 128
            V   S ++ +AS  VF +  +V++  K  +  +  R++       +S LI  Y   G +
Sbjct: 91  GVAHSSLLKLLASFRVFPEIELVLENMKAQHL-KPTREA-------FSALILAYGESGSL 142

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGL 188
           D ++++F  + +M            +  +V SNS                     L+NGL
Sbjct: 143 DRALQLFHTVREM---------HNCLPTVVASNS---------------------LLNGL 172

Query: 189 LRKGVIENAFHMHRQVIQR----GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++ G ++ A  ++ +++Q     G V +  T + ++K LC  G+I     L       G 
Sbjct: 173 VKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGC 232

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
            P+VV ++ +I+ +CK+  L+ A +    +    ++P +  Y  LI+G  KAG  +  ++
Sbjct: 233 VPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQ 292

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           LL     RGL ++V VF++V+DA    G V +A +T  RM   G  P++ +Y+ +I   C
Sbjct: 293 LLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSC 352

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-- 422
           + GR+ EA     +   R L P+  +Y+ L+  +CK G       +   + + G KPD  
Sbjct: 353 KGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLV 412

Query: 423 ---AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
              A +  ++++G +  AL    + +   + P+  I+N LM G C+  R      L   M
Sbjct: 413 SYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEM 472

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              N++PDV     L+ G    G L  AI +F  ++++G+ P ++ Y+A+I G  K   +
Sbjct: 473 LDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKM 532

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +  L     M+    APD   Y+ +++  +K+ ++ +ALK+FGQ+     +P++ITY ++
Sbjct: 533 TDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSL 592

Query: 600 ICGYC 604
           I G+C
Sbjct: 593 INGFC 597



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/508 (23%), Positives = 220/508 (43%), Gaps = 48/508 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI  + + G+ +   ++   M+  G+ ++  +   ++        V +  +  R M 
Sbjct: 274 YGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMA 333

Query: 175 ----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
               G     Y  ++N   + G I+ A     +  +RG +PN  +   ++   C  G   
Sbjct: 334 EMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYV 393

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ +   +  +G KP++V++   I+      +++ A  +   MME  + PD  IY++L+
Sbjct: 394 KAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLM 453

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K GR      LL   LDR ++ DV VF+++MD ++  G++  A++ +  ++  G  
Sbjct: 454 SGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVD 513

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P ++ Y+ +IKG C+ G++ +A     ++      P   TYS++IDG+ K   +     +
Sbjct: 514 PGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKM 573

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +  M+K   KP+ +  + LING                               C+     
Sbjct: 574 FGQMMKHKFKPNVITYTSLINGF------------------------------CKKADMI 603

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              K+F  M  +++ P+V+T+T L+ G    G    A  +F  ML  G  P+  T+  +I
Sbjct: 604 RAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLI 663

Query: 531 HGLFKGKNI--------------SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL                    S+ L  F +M   G    IA YN ++  L K   +D 
Sbjct: 664 NGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDT 723

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A  L  ++  +G   D + +  ++ G C
Sbjct: 724 AQLLLTKMLTKGFLIDSVCFTAMLHGLC 751



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 161/391 (41%), Gaps = 88/391 (22%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   I   V  G+ID ++ +   M + G++    +   LMS L  +        L   M 
Sbjct: 414 YGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEML 473

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +       V+  LM+G +R G ++ A  + + +I++G  P IV  N ++K  C  G++ 
Sbjct: 474 DRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMT 533

Query: 231 NASS-----------------------------------LFDVLLLVGPKPNVVTFSTLI 255
           +A S                                   +F  ++    KPNV+T+++LI
Sbjct: 534 DALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI 593

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN---ELLL----- 307
           N FCK+A + +A +++  M   DLVP+++ Y+ L+ G FKAG+ ++     EL+L     
Sbjct: 594 NGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCP 653

Query: 308 ---------------TAL-------------DRGLKLD-------------VVVFSSVMD 326
                          TA              +R L LD             +  ++SV+ 
Sbjct: 654 PNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIV 713

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G V  A     +ML  GFL + + ++ ++ GLC +G+  E   +    L +    
Sbjct: 714 CLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQ 773

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           + + YS  +D +   G+L +   +   +I+ 
Sbjct: 774 TAVKYSLTLDKYLYQGRLSEASVILQTLIEE 804


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 215/438 (49%), Gaps = 16/438 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L++    KG + +A      +   G  P+ VT N +L   C  G +G A +L   +
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG-- 297
              G  P   T++TL++AF +   +++A ++   M      PDL  Y++L  GL +AG  
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKV 329

Query: 298 ----RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
               RLK+  E L TAL      DVV +++++DA         A++  + M + G  P +
Sbjct: 330 DEAFRLKDEMERLGTALP-----DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++++I++K LC++G+L EA G   ++    L P ++TY++LID +CK+G +   F+L D 
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M+ +GLK D    + ++  L       DA        +   +P+   + T+M    +   
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               ++L+  M    + P + T+  LI+G+     L  AI    + +++GL PD  TY+ 
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNI 564

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           IIH   K  ++         M  N   PD+   N L+N L     LD ALKLF    ++G
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 589 LEPDIITYNTIICGYCSL 606
            + D+ITYNT+I   C +
Sbjct: 625 KKVDVITYNTLIQSMCKV 642



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 240/516 (46%), Gaps = 19/516 (3%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVD 159
           R+ RD +      Y+ L+  + R+G I ++ ++   M+  G    PDL     L   L  
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG--FEPDLRTYNVLAMGLCQ 325

Query: 160 SNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           +  V + ++L   M   G  +     Y  L++   +     +A  +  ++  +G  P +V
Sbjct: 326 AGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++K LC  G++  A    + +   G  P+V+T++TLI+A+CK   + KAF L + M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +   L  D    + ++  L K  R ++  ELL +   RG   D V + +VM AY    + 
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A++ +D+M+    +P++ +Y+ LIKGLC+  RL EA     + + + L P   TY+ +
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNII 565

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           I  +CK G L + F  ++ M++   KPD V C+ L+NGL     +  AL+ F   V    
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK 625

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
             ++  +NTL+   C++      +  F  M +  ++PD  T+ V++  ++  G    A  
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL-MERNGVAPDIAI--YNVLLN 566
           +  ++   G      +++  +          V  H  K   E +  A D A+  Y   LN
Sbjct: 686 MLHKLADSGKLSQ--SFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLN 743

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            L     L  A  +  ++  +G+  D  TY T++ G
Sbjct: 744 GLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEG 779



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 204/448 (45%), Gaps = 43/448 (9%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL--FDVLLLVGPKPNVVTFSTLINA 257
           +H    +RG  P++   N +L  L  +      +SL  F  L+ +   PN  TF+ L++ 
Sbjct: 158 LHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
            C +  L  A    + M    L PD + Y+ L++   + G L E   LL      G+   
Sbjct: 218 HCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPT 277

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR--------- 368
              +++++ A+  +G + +A +  + M   GF P++ +Y++L  GLCQ G+         
Sbjct: 278 QPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKD 337

Query: 369 -----------------LVEAC----------GLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
                            LV+AC           L  ++  + ++P+L+T++ ++   CK 
Sbjct: 338 EMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKE 397

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIF 456
           GKL +     + + + GL PD +  + LI+     G +  A     + V   L  + F  
Sbjct: 398 GKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTL 457

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           NT++   C++KR  D  +L          PD +++  ++     + +   A+ L+ QM++
Sbjct: 458 NTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIE 517

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           R L P + TY+ +I GL + + +   +         G+ PD   YN++++   KE +L+ 
Sbjct: 518 RKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLEN 577

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A +   ++ +   +PD++T NT++ G C
Sbjct: 578 AFRFHNKMVENSFKPDVVTCNTLMNGLC 605



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 174/375 (46%), Gaps = 40/375 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y + G + ++  +   M   G+ +    +  ++  L          +L  +  
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y  +M    ++   E A  +  Q+I+R  +P+I T N ++K LC   ++ 
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A    +  +  G  P+  T++ +I+A+CKE  LE AF+ +N M+E    PD++  + L+
Sbjct: 542 EAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL   G+L +  +L  + +++G K+DV+ +++++ +   +GDV  A+  +D M   G  
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQ 661

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVL----------IRRLEPS------------- 387
           P+  +Y++++  L + GR  EA  +  ++              L+PS             
Sbjct: 662 PDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGK 721

Query: 388 -------------LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
                        L TY   ++G C  G+L++  ++ D M+++G+  D      L+ GL+
Sbjct: 722 PEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLI 781

Query: 435 GDALRFFFQSVRMTL 449
               R    + + TL
Sbjct: 782 KRQKRQTHAAGQSTL 796



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 2/125 (1%)

Query: 484 IKPDVITHTVLIRGIA-SQGSLSSAIL-LFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
           ++P +     ++  ++ S  +L  A L +F  +++  L P+  T++ ++H       ++ 
Sbjct: 167 VRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLAD 226

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L     M+  G++PD   YN LLN   ++  L  A  L  ++   G+ P   TYNT++ 
Sbjct: 227 ALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVS 286

Query: 602 GYCSL 606
            +  L
Sbjct: 287 AFARL 291


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 163/644 (25%), Positives = 281/644 (43%), Gaps = 107/644 (16%)

Query: 51  AIQFFKWTHNCVSSPNIAQ---------LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFF 101
           A++F KW    +  P +             H+L+++ M D A  +   +      + + F
Sbjct: 93  ALKFLKWV---IKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIF 149

Query: 102 RLFRDSL---GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
               D+          +  LI  Y++ G ID +VE F  +  +G   S      +++ +V
Sbjct: 150 GALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMV 209

Query: 159 DSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
                   + L R M  KG C     +  L+NGL  +G ++ A ++ +Q+ + GFVP IV
Sbjct: 210 KDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV 269

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPK----------------------------- 245
           T N +L   C  G+   A  L D ++  G +                             
Sbjct: 270 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 329

Query: 246 ------PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 PN VT++TLIN F KE K+  A Q++N M + DL P+ + Y+ LI G    G  
Sbjct: 330 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 389

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E   LL      GL+L+              G+V  A++ Y  M   G   +  + ++L
Sbjct: 390 EEALRLLDHMEAAGLRLNEH------------GNVTEAMKVYAVMNCNGHGADHFTCNVL 437

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  LC+ G+L EA      +    L P+ +TY  +I+G+   G   + FS +D+MIK G 
Sbjct: 438 VSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQ 497

Query: 420 KP-----------------------------------DAVVCSLLI-----NGLMGDALR 439
            P                                   D+V+ + L+     +G + +A+ 
Sbjct: 498 HPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVA 557

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF-MLMGMYNIKPDVITHTVLIRGI 498
            F + V+  ++P+ + +++L+ G CR  +A   V LF   MG   + P+ + +T L+ G+
Sbjct: 558 LFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 617

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
           +  G   +A   F +M+K+G  PD + ++AII    +   +      F  M   GV P++
Sbjct: 618 SKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNL 677

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           A YN+LL+   K+  L   L L+  +   G+ PD +T++++I G
Sbjct: 678 ATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILG 721



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 220/482 (45%), Gaps = 22/482 (4%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
           V+    D +  I  ++  MGI       + +   L+D+      Y LC ++      V++
Sbjct: 123 VKARMYDSAKSILRHLCQMGIG-----SKSIFGALMDT------YPLCNSIPS----VFD 167

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            L+   L++G+I+ A      V   GF P++ TCN IL  +  + +     SLF  +   
Sbjct: 168 LLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK 227

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  PNV TF+ LIN  C E  L+KA  L   M E   VP ++ Y+ L++   K GR K  
Sbjct: 228 GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 287

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            EL+   + +G++ DV  ++  +D         +A     +M      PN ++Y+ LI G
Sbjct: 288 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 347

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
             ++G++  A  +F ++    L P+ +TY++LI G C  G   +   L D+M   GL+ +
Sbjct: 348 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 407

Query: 423 AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
                   +G + +A++ +          + F  N L+   CR  +  +  K    M   
Sbjct: 408 E-------HGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 460

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            + P+ IT+  +I G  S G   +A   F  M+K G  P   TY +++ GL KG N+   
Sbjct: 461 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 520

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
                 +     A D  +YN LL    K  NL  A+ LF ++    + PD  TY++++ G
Sbjct: 521 KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTG 580

Query: 603 YC 604
            C
Sbjct: 581 LC 582



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 151/616 (24%), Positives = 274/616 (44%), Gaps = 42/616 (6%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
           N  + NL   +    A    K     + SPN      LI+  ++     VA+ VF++M  
Sbjct: 307 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMS- 365

Query: 93  QFG-----KTYNFFRLFRDSLGDFGCDYSFLIENYVRI--------GKIDESVEIFAYMS 139
           +F       TYN        +GDF  + +  + +++          G + E+++++A M+
Sbjct: 366 KFDLSPNCVTYNALIGGHCHVGDF--EEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMN 423

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIE 195
             G          L+S L     +G+  K    M   G       Y+ ++NG    G   
Sbjct: 424 CNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPL 483

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           NAF     +I+ G  P+  T   +LK LC  G +  A    + L  +    + V ++TL+
Sbjct: 484 NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLL 543

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-L 314
              CK   L +A  L++ M++ +++PD   YS L+ GL + G+      L  TA+ RG L
Sbjct: 544 AETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTL 603

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             + V+++ ++D     G    A   ++ M+  G  P+ ++++ +I    ++G++++A  
Sbjct: 604 FPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAND 663

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
            F  +    + P+L TY+ L+ GF K   L    SLY  M++ G+ PD +    LI GL 
Sbjct: 664 FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 723

Query: 434 ----------------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
                           M ++     + +   +IP    + TL++G CR+       KL  
Sbjct: 724 KSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKD 783

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M         +  + ++RG+   G    A+L+   ML+  L P + T++ ++H   +  
Sbjct: 784 EMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA 843

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I+  L +  +ME  G+  D+  YNVL+  +    +  AA +L+ ++  R L P+I TY 
Sbjct: 844 KIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYA 903

Query: 598 TIICGYCSLNSCLIDG 613
            ++    + N+ LI G
Sbjct: 904 VLVDAISAANN-LIQG 918



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 121/506 (23%), Positives = 224/506 (44%), Gaps = 69/506 (13%)

Query: 111 FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS--------NS 162
           F C+   L+ +  R GK+ E+ +   +MS +G  L P+ +     C+++         N+
Sbjct: 432 FTCN--VLVSSLCRDGKLGEAEKFLCHMSRIG--LVPNSIT--YDCIINGYGSIGDPLNA 485

Query: 163 VGQYYKLCRAMRGKGFCVYEFLMNGLLRKG-VIENAFHMHRQVIQRGFVPNIVTCNKILK 221
              +  + +  +   F  Y  L+ GL + G ++E    ++R     G V +++  N +L 
Sbjct: 486 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY-NTLLA 544

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM-EMDLV 280
             C +G +  A +LFD ++     P+  T+S+L+   C++ K   A  L+   M    L 
Sbjct: 545 ETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLF 604

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+ ++Y+ L+DGL KAG  K         + +G   D V F++++D+    G + +A   
Sbjct: 605 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 664

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI----- 395
           +  M   G  PN+ +Y+IL+ G  ++  L+    L+  ++   + P  LT+ SLI     
Sbjct: 665 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 724

Query: 396 ------------------------------------------DGFCKSGKLRDGFSLYDN 413
                                                     +G C+ G ++  F L D 
Sbjct: 725 SGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDE 784

Query: 414 MIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M   G     V  S ++ GL+      DA+      +RM L+P +  F TLM   CR  +
Sbjct: 785 MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 844

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             + +KL  +M +  +K DV+ + VLI G+ + G  ++A  L+ +M  R L P++ TY+ 
Sbjct: 845 IAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 904

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGV 554
           ++  +    N+  G  +   ++  G+
Sbjct: 905 LVDAISAANNLIQGEKLLTDLQERGL 930



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 69/134 (51%)

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            V+ F L+G+   KP V T  +++  +           LF +M  +G+ P+V T++ +I+
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 241

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL    N+    ++ K ME NG  P I  YN LLN   K+    AA++L   +  +G+E 
Sbjct: 242 GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEA 301

Query: 592 DIITYNTIICGYCS 605
           D+ TYN  I   C+
Sbjct: 302 DVCTYNVFIDNLCT 315


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 145/593 (24%), Positives = 276/593 (46%), Gaps = 33/593 (5%)

Query: 43  IKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSD------MRDVASH---------VF 87
           +K   P+  I F       +SS ++  L  +  Q+D      + ++AS          ++
Sbjct: 27  LKLTPPSSTISFASPNSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEPALY 86

Query: 88  DKMVIQFGKTYNF--FRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYM-S 139
           ++++++ G++ +F   R   + + + GC+     +  LIE+Y +    DE + +  +M  
Sbjct: 87  EEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMID 146

Query: 140 DMGIYLSPDLVQRLMSCLVDSNSVG----QYYKLCRAMRGKGFCVYEFLMNGLLRKGVIE 195
           D G+        R+++ LVD N++      + K+           +  L+  L R   + 
Sbjct: 147 DFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  M   +   G VP+  T   I++     G +  A  + + ++  G   + V+ + ++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266

Query: 256 NAFCKEAKLEKAFQLYNLMMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           + FCKE ++E A      M   D   PD   ++ L++GL KAG +K   E++   L  G 
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             DV  ++SV+     +G+V  AV+  D+M+     PN ++Y+ LI  LC++ ++ EA  
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN--- 431
           L   +  + + P + T++SLI G C +   R    L++ M  +G +PD    ++LI+   
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446

Query: 432 --GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
             G + +AL    Q        ++  +NTL+DG C+  +  +  ++F  M ++ +  + +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSV 506

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+  LI G+     +  A  L  QM+  G  PD  TY++++    +G +I     + + M
Sbjct: 507 TYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAM 566

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             NG  PDI  Y  L++ L K   ++ A KL   +  +G+      YN +I G
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQG 619



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 213/424 (50%), Gaps = 32/424 (7%)

Query: 184 LMNGLLRKGVIENAFHMHRQVI-QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
           +++G  ++G +E+A +  +++  Q GF P+  T N ++  LC  G + +A  + DV+L  
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P+V T++++I+  CK  ++++A +  + M+  D  P+ + Y+ LI  L K  +++E 
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            EL      +G+  DV  F+S++       +   A++ ++ M + G  P+  +Y++LI  
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC +G+L EA  +  Q+ +     S++TY++LIDGFCK+ K+R+   ++D M   G+  +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRN 504

Query: 423 AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +V                               +NTL+DG C+ +R  D  +L   M M 
Sbjct: 505 SVT------------------------------YNTLIDGLCKSRRVEDASQLMDQMIME 534

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
             KPD  T+  L+      G +  A  +   M   G  PD++TY  +I GL K   + V 
Sbjct: 535 GQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG-LEPDIITYNTIIC 601
             + + ++  G+A     YN ++  L ++     A+ LF ++ ++    PD ++Y  +  
Sbjct: 595 SKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFR 654

Query: 602 GYCS 605
           G C+
Sbjct: 655 GLCN 658



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 241/508 (47%), Gaps = 53/508 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +++ Y+  G +D ++ I   M + G   S   V  ++        V       + M 
Sbjct: 227 FTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286

Query: 175 GK-GF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            + GF      +  L+NGL + G +++A  +   ++Q G+ P++ T N ++  LC  G++
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A    D ++     PN VT++TLI+  CKE ++E+A +L  ++    ++PD+  ++ L
Sbjct: 347 KEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I GL      +   EL      +G + D   ++ ++D+    G +  A+    +M   G 
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             +VI+Y+ LI G C+  ++ EA  +F ++ +  +  + +TY++LIDG CKS ++ D   
Sbjct: 467 ARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQ 526

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR---L 466
           L D MI  G KPD                               F +N+L+   CR   +
Sbjct: 527 LMDQMIMEGQKPDK------------------------------FTYNSLLTHFCRGGDI 556

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG--SLSSAILLFFQMLKRGLTPDVI 524
           K+A D V+     G    +PD++T+  LI G+   G   ++S +L   QM    LTP   
Sbjct: 557 KKAADIVQAMTSNG---CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHA- 612

Query: 525 TYSAIIHGLFKGKNISVGLHMFK-LMERNGVAPDIAIYNVLLNMLIKECN----LDAALK 579
            Y+ +I GLF+ +  +  +++F+ ++E+N  APD   Y ++   L   CN    +  A+ 
Sbjct: 613 -YNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGL---CNGGGPIREAVD 668

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLN 607
              +L ++G  P+  +   +  G  +L+
Sbjct: 669 FLVELLEKGFVPEFSSLYMLAEGLLTLS 696



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 213/449 (47%), Gaps = 21/449 (4%)

Query: 105 RDSLGDFGCDYS-----FLIENYVRIGKIDESVEIFAYMSDM-GIYLSPDLVQRLMSCLV 158
           R+ + +FGC +S      ++  + + G++++++     MS+  G +        L++ L 
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306

Query: 159 DSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
            +  V    ++   M  +G+      Y  +++GL + G ++ A     Q+I R   PN V
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTV 366

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++  LC   Q+  A+ L  VL   G  P+V TF++LI   C       A +L+  M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
                 PD   Y++LID L   G+L E   +L      G    V+ +++++D +     +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKI 486

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A + +D M   G   N ++Y+ LI GLC+  R+ +A  L  Q+++   +P   TY+SL
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSL 546

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRM--- 447
           +  FC+ G ++    +   M   G +PD V    LI+GL      +      +S++M   
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN-IKPDVITHTVLIRGIAS-QGSLS 505
            L P+   +N ++ G  R ++ T+ + LF  M   N   PD +++ ++ RG+ +  G + 
Sbjct: 607 ALTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIR 664

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLF 534
            A+    ++L++G  P+  +   +  GL 
Sbjct: 665 EAVDFLVELLEKGFVPEFSSLYMLAEGLL 693



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 184/368 (50%), Gaps = 6/368 (1%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G KP+   ++ ++N       L+     +  M    + PD+  +++LI  L +A +L+  
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             +L      GL  D   F+++M  Y+  GD+  A++  ++M+  G   + +S ++++ G
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268

Query: 363 LCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
            C++GR+ +A     ++  +    P   T+++L++G CK+G ++    + D M++ G  P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D    + +I+GL     + +A+ F  Q +     PN   +NTL+   C+  +  +  +L 
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
            ++    I PDV T   LI+G+    +   A+ LF +M  +G  PD  TY+ +I  L   
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +   L+M K ME +G A  +  YN L++   K   +  A ++F ++   G+  + +TY
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTY 508

Query: 597 NTIICGYC 604
           NT+I G C
Sbjct: 509 NTLIDGLC 516


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 253/508 (49%), Gaps = 10/508 (1%)

Query: 113 CDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC 170
           C Y++  +I  Y   G+ +++ ++   + + G   S      +++CL     V +   L 
Sbjct: 52  CAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF 111

Query: 171 RAMRGKG---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
             M+         Y  +++ L   G +E A+ +  ++      PN++T N ++ RLC   
Sbjct: 112 EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 171

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  +F+     G  P+ VT+ +LI+   K+ ++++A++L+  M++     + ++Y+
Sbjct: 172 KLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 231

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI   F  GR ++G+++    + RG K D+ + ++ MD     G+V +    ++ + + 
Sbjct: 232 SLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY 291

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GFLP+V SYSILI GL + G+  E   +F  +  +        Y++++DGFCKSGK+   
Sbjct: 292 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 351

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           + + + M ++ ++P       +++GL     + +A   F ++    +  N+ ++++L+DG
Sbjct: 352 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 411

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             ++ R  +   +   M    + P+V T   L+  +     ++ A++ F  M +    P+
Sbjct: 412 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 471

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
             TYS +I+GL + +  +     ++ M++ G+ P++  Y  +++ L K  N+  A  LF 
Sbjct: 472 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 531

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSCL 610
           +    G  PD  ++N +I G  + N  +
Sbjct: 532 RFKANGGIPDAASFNALIEGMSNANRAM 559



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 189/411 (45%), Gaps = 39/411 (9%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A   F  L   G KP+ V+++++I   CK  +L +A +L+  M     VP    Y+ +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM---------DAYVGIGDV-------- 334
           G   AGR ++  +LL    +RG    VV F+S++         D  + + +V        
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121

Query: 335 --------------GRAVQTY---DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
                         GR  + Y   D M +    PN+++ +I++  LC+  +L EA  +F 
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL-----ING 432
               R   P  +TY SLIDG  K G++ + + L++ M+  G   + VV + L     I+G
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
              D  + F + +R    P+L + NT MD   +         +F  +  Y   PDV +++
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           +LI G+   G       +F  M ++G   D   Y+A++ G  K   +     + + M+  
Sbjct: 302 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            V P +A Y  +++ L K   LD A  LF +   +G+E +++ Y+++I G+
Sbjct: 362 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 412



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 158/359 (44%), Gaps = 45/359 (12%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G+    +RLF   L D G +     Y+ LI N+   G+ ++  +IF  +   G      L
Sbjct: 206 GQVDEAYRLFEKML-DAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL 264

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVI 205
           +   M C+  +  V +   +   +R  GF      Y  L++GL + G      ++   + 
Sbjct: 265 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 324

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           Q+GF  +    N ++   C +G++  A  + + +     +P V T+  +++   K  +L+
Sbjct: 325 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 384

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A+ L+       +  ++++YS LIDG  K GR+ E   +L   + +GL  +V  ++S++
Sbjct: 385 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 444

Query: 326 DAYVGIGDVGRA----------------------------VQTYDR-------MLNGGFL 350
           DA V   ++  A                            VQ Y++       M   G +
Sbjct: 445 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 504

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           PNV++Y+ +I GL + G + +A  LF +       P   ++++LI+G   + +  + + 
Sbjct: 505 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 6/177 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+ + ++G+IDE+  I   M   G+  +      L+  LV +  + +     ++M+
Sbjct: 405 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 464

Query: 175 G----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L+NGL R      AF   + + ++G VPN+VT   ++  L   G I 
Sbjct: 465 EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNIT 524

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +A SLF+     G  P+  +F+ LI       +  +A+Q   L   M L  D +I+S
Sbjct: 525 DAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQAGWLDTTMRL--DCLIFS 579


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 245/507 (48%), Gaps = 14/507 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLS-PDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           S ++  Y   G + ++VEI+ Y+ ++  Y S PD++    L+S +V S  +    K+   
Sbjct: 138 SHVLHAYAESGFLSKAVEIYDYVVEL--YDSVPDVIACNALLSLVVKSRRLEDARKVYDE 195

Query: 173 MRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G CV  +    ++ G+  +G +E    +      +G VPNIV  N I+   C  G 
Sbjct: 196 MCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGD 255

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I NA  +F  L L G  P + TF T+IN FCK+     + +L   + E  L   +   + 
Sbjct: 256 IENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNN 315

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +ID  ++ G   +  E +   +    K D+  ++ +++     G    A    D     G
Sbjct: 316 IIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKG 375

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            +   +SY+ LI+  C+      A  L  Q+  R  +P ++TY  LI G   SG + D  
Sbjct: 376 LILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAV 435

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           ++   +I RG+ PDA + ++L++GL        A   F + +  +++P+ +++ TL+DG 
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGF 495

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            R     +  K+F L     +K DV+ H  +I+G    G L  A+    +M +  L PD 
Sbjct: 496 IRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TYS II G  K ++++  + +F+ ME+N   P++  Y  L+N    + +   A + F +
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKE 615

Query: 584 LTDRGLEPDIITYNTIICGYCSLNSCL 610
           +  R L P+++TY T+I  +   +S L
Sbjct: 616 MQSRDLVPNVVTYTTLIRSFAKESSTL 642



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 196/442 (44%), Gaps = 49/442 (11%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+N L ++G  E A  +  +  ++G +   ++   +++  C + +   AS L   L
Sbjct: 347 TYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQL 406

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KP++VT+  LI+       ++ A  +   +++  + PD  IY++L+ GL K GR 
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L    LDR +  D  V+++++D ++  GD   A + +   +  G   +V+ ++ +
Sbjct: 467 LPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAM 526

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKG C+ G L EA     ++    L P   TYS++IDG+ K   +     ++ +M K   
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKC 586

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR--LKRATDTVKLFM 477
           KP+ V  + LING                              CC+     A +T   F 
Sbjct: 587 KPNVVTYTSLINGF-----------------------------CCQGDFSLAEET---FK 614

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGS-LSSAILLFFQMLKRGLTPDVITYSAIIHGLFK- 535
            M   ++ P+V+T+T LIR  A + S L  A+  +  M+     P+ +T++ ++ G  K 
Sbjct: 615 EMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674

Query: 536 ----------GKNISVG---LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
                     G N          F  M+ +G +   A YN +L  L     +  A  L  
Sbjct: 675 TSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQD 734

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
           ++  +G  PD +++  I+ G+C
Sbjct: 735 RMVKKGFSPDPVSFAAILHGFC 756


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 251/511 (49%), Gaps = 34/511 (6%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFC-- 179
           +   ID++V +F  M DM  +  P +V+  +++  +           L   M  KG    
Sbjct: 31  KFDSIDDAVALFHRMVDM--HPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPF 88

Query: 180 --VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              +  L+N     G ++ AF +  ++++ G  PN+VT   ++K  C+N ++ +A  ++D
Sbjct: 89  TVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYD 148

Query: 238 VLLLVGPKPNVVTFSTLINAFCKE--AKLEKAFQLYNLMMEMDLV-PDLIIYSILIDGLF 294
            ++    + + V + TLIN  CK    K   A QL   M E  LV P+LI+Y+ ++ GL 
Sbjct: 149 EMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLC 208

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD----------------VGRAV 338
           K G + E   L    + +G+  D+  +SS++      G                 V  A 
Sbjct: 209 KDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEAR 268

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           + ++ M+  G   ++I+Y+IL+ G C   ++ EA  LF  ++ R  +P  +TY+ L+ G+
Sbjct: 269 ELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGY 328

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           C   K+ +  +L+  MI+RGL PD    ++LI G      +G+A+          L+PN+
Sbjct: 329 CLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNI 388

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMY-NIKPDVITHTVLIRGIASQGSLSSAILLFF 512
             +N+++DG C+     D  KL   M       PDV T+ +L+  +     +  AI  F 
Sbjct: 389 ITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFK 448

Query: 513 QML-KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            ++ +R   P+V +Y+ +I G  K + +   +++F  M    + PDI  YN+LL+ L   
Sbjct: 449 HLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNG 508

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             LD A+ L  Q+ D+G+ P++ TYN +I G
Sbjct: 509 QQLDKAIALLVQIVDQGISPNLRTYNILING 539



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 221/417 (52%), Gaps = 28/417 (6%)

Query: 180 VYEFLMNGLLRK--GVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASSLF 236
           +Y  L+NGL +   G    A  + +++ +R  V PN++  N ++  LC +G I  A  L 
Sbjct: 161 LYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLC 220

Query: 237 DVLLLVGPKPNVVTFSTLI----------------NAFCKEAKLEKAFQLYNLMMEMDLV 280
             +++ G  P++ T+S+LI                N FC   K+++A +L+N+M+E    
Sbjct: 221 SKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQ 280

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
            D+I Y+IL++G     ++ E  +L    ++RG + D + ++ +M  Y  I  V  A   
Sbjct: 281 HDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNL 340

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           +  M+  G +P+V SY+ILIKG C+  R+ EA  L   + ++ L P+++TY+S++DG CK
Sbjct: 341 FHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCK 400

Query: 401 SGKLRDGFSLYDNM-IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV-RMTLIPNL 453
           SG + D + L D M       PD    ++L+  L     +  A+ FF   +   +  PN+
Sbjct: 401 SGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNV 460

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
           + +N L+ GCC+ +R  + + LF  M   N+ PD++T+ +L+  + +   L  AI L  Q
Sbjct: 461 WSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQ 520

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           ++ +G++P++ TY+ +I+GL KG        +   +   G  PD+  Y  ++N L K
Sbjct: 521 IVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--IINELCK 575



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 211/413 (51%), Gaps = 37/413 (8%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G VP  VT N ++   C  GQ+  A S+   +L  G +PNVVTF+TL+  FC   K+  
Sbjct: 83  KGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLD 142

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKA--GRLKEGNELLLTALDRGL-KLDVVVFSS 323
           A  +Y+ M+   +  D ++Y  LI+GL K+  G+ +   +LL    +R L K +++++++
Sbjct: 143 ALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNT 202

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           V+      G++  A     +M+  G  P++ +YS LI GLC+ G+  E            
Sbjct: 203 VVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEV----------- 251

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
                   +SL++GFC + K+ +   L++ MI+RG + D +  ++L+NG      +G+A 
Sbjct: 252 --------TSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEAR 303

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           + F   V     P+   +  LM G C + +  +   LF  M    + PDV ++ +LI+G 
Sbjct: 304 KLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGY 363

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV---- 554
                +  A+ L   M  + L P++ITY++++ GL K   I   L  +KL++        
Sbjct: 364 CKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGI---LDAWKLVDEMHYCCQP 420

Query: 555 APDIAIYNVLLNMLIK-ECNLDAALKLFGQLT-DRGLEPDIITYNTIICGYCS 605
            PD+  YN+LL  L + EC ++ A+  F  L  +R   P++ +YN +I G C 
Sbjct: 421 PPDVTTYNILLESLCRIEC-VEKAIAFFKHLIFERSFAPNVWSYNILISGCCK 472



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 183/385 (47%), Gaps = 17/385 (4%)

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           C    I +A +LF  ++ + P P++V F+ ++    K      A  LY LM    +VP  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + ++ILI+     G++     ++   L  G + +VV F+++M  +     +  A+  YD 
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 344 MLNGGFLPNVISYSILIKGLCQQ--GRLVEACGLFGQVLIRRL-EPSLLTYSSLIDGFCK 400
           M+      + + Y  LI GLC+   G+   A  L  ++  R+L +P+L+ Y++++ G CK
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLM 460
            G + +   L   MI +G+ PD    S LI GL     R    S              L+
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTS--------------LL 255

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +G C   +  +  +LF +M     + D+I + +L+ G      +  A  LF  M++RG  
Sbjct: 256 NGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQ 315

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD ITY+ ++HG      +    ++F  M   G+ PD+  YN+L+    K   +  A+ L
Sbjct: 316 PDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNL 375

Query: 581 FGQLTDRGLEPDIITYNTIICGYCS 605
              +  + L P+IITYN+++ G C 
Sbjct: 376 LEDMFLKNLVPNIITYNSVVDGLCK 400



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 183/404 (45%), Gaps = 50/404 (12%)

Query: 44  KTNNPTPAIQFF-KWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVIQ--FGKT 97
           K   P  A+Q   K     +  PN+     ++H L +    + A  +  KM++Q  F   
Sbjct: 173 KIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDI 232

Query: 98  YNFFRLFRDSLGDFGC--DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS 155
           + +  L    L   G   + + L+  +    K+DE+ E+F  M + G     D++     
Sbjct: 233 FTYSSLIY-GLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERG--EQHDIIN---- 285

Query: 156 CLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
                                    Y  LMNG      +  A  +   +++RG  P+ +T
Sbjct: 286 -------------------------YNILMNGYCLNNKVGEARKLFHMMVERGEQPDTIT 320

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
              ++   C+  ++  A +LF  ++  G  P+V +++ LI  +CK  ++ +A  L   M 
Sbjct: 321 YTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMF 380

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-----GLKLDVVVFSSVMDAYVG 330
             +LVP++I Y+ ++DGL K+G + +  +L    +D          DV  ++ ++++   
Sbjct: 381 LKNLVPNIITYNSVVDGLCKSGGILDAWKL----VDEMHYCCQPPPDVTTYNILLESLCR 436

Query: 331 IGDVGRAVQTYDRML-NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
           I  V +A+  +  ++    F PNV SY+ILI G C+  RL EA  LF  +  + L P ++
Sbjct: 437 IECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIV 496

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           TY+ L+D      +L    +L   ++ +G+ P+    ++LINGL
Sbjct: 497 TYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGL 540


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 239/475 (50%), Gaps = 15/475 (3%)

Query: 142 GIYLSPDLVQR----LMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKG 192
           G +  P +V++    L    +D+       ++    R KGF +     +EFL+  L R G
Sbjct: 109 GEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLL-ALKRSG 167

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            +E      RQ++  G    + +   ++  LC  G++  A +L D L+  G KP+V+T++
Sbjct: 168 NMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 227

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           TL+N + +   +    ++ +LM +  +  ++  Y++LI+   ++ +++E  +L    L +
Sbjct: 228 TLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK 287

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G++ DV +++S+++     G++ RA   +D M     +PN  +Y  LI G C+ G +  A
Sbjct: 288 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 347

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             +   +  + ++ + + +++L+DG+CK G + +   L + M ++G + DA  C+++ +G
Sbjct: 348 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASG 407

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                   +A R         + PN+  F+ L+D  C+ +   +  +LF +M      P 
Sbjct: 408 FCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPS 467

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           V+T+   I     +G +  A  L  +M +RGL PD  TY+++I G     N+   L +F 
Sbjct: 468 VVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFN 527

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            M + G+  ++  Y V+++ L K+   D A KL+ ++   G+ PD   Y+++I  
Sbjct: 528 EMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIAS 582



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 218/476 (45%), Gaps = 46/476 (9%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           CD  F +  Y+     D S+E+F Y    G  +        +  L  S ++    +  R 
Sbjct: 121 CDMLFRV--YMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQ 178

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL-------- 220
           M   G     C +  +++GL +KG +  A  +  +++ +GF P+++T N +L        
Sbjct: 179 MVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKD 238

Query: 221 ---------------------------KRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
                                      +    + +I  A  LFD +L  G +P+V  +++
Sbjct: 239 VGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTS 298

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +IN  CK   +++AF L++ M E  LVP+   Y  LI+G  KAG +K    ++     +G
Sbjct: 299 IINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKG 358

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           + ++ V+F+++MD Y   G +  A++  + M   GF  +  + +I+  G C+  R  EA 
Sbjct: 359 VDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAK 418

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
            L   +  R + P+++++S LID +CK     +   L+  M K+G  P  V  +  I   
Sbjct: 419 RLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERY 478

Query: 432 ---GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
              G M +A +   +     L+P+ + + +L+DG          ++LF  M    +  +V
Sbjct: 479 CKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNV 538

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           +T+TV+I G++  G    A  L+ +M K G+ PD   YS++I  L K   +  GL 
Sbjct: 539 VTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 594



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 157/321 (48%), Gaps = 11/321 (3%)

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L ++G ++   E L   +D G+++ V  +++V+D     G+V RA    D ++  GF P
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221

Query: 352 NVISYSILIKGLCQ---QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           +VI+Y+ L+ G  +    G + E   L  + ++   + ++ TY+ LI+ + +S K+ +  
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVV---DYNVTTYTMLIEWYSRSSKIEEAE 278

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D M+K+G++PD  + + +IN     G M  A   F +     L+PN + +  L++G 
Sbjct: 279 KLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGA 338

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+         +   M    +  + +    L+ G   +G +  A+ L   M ++G   D 
Sbjct: 339 CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDA 398

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            T + I  G  +         +   ME  GVAP++  +++L+++  KE N   A +LF  
Sbjct: 399 FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKV 458

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           +  +G  P ++TYN  I  YC
Sbjct: 459 MEKKGKAPSVVTYNAFIERYC 479



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 163/344 (47%), Gaps = 46/344 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL---------------VQR---LMSC 156
           Y+ LIE Y R  KI+E+ ++F  M   GI   PD+               ++R   L   
Sbjct: 261 YTMLIEWYSRSSKIEEAEKLFDEMLKKGI--EPDVYIYTSIINWNCKFGNMKRAFVLFDE 318

Query: 157 LVDSNSVGQYYK-------LCRA------------MRGKGF----CVYEFLMNGLLRKGV 193
           + +   V   Y         C+A            M+ KG      ++  LM+G  +KG+
Sbjct: 319 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 378

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           I+ A  +   + Q+GF  +  TCN I    C + +   A  L   +   G  PNVV+FS 
Sbjct: 379 IDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSI 438

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI+ +CKE    +A +L+ +M +    P ++ Y+  I+   K G+++E  +L+    +RG
Sbjct: 439 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 498

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L  D   ++S++D     G+V RA++ ++ M   G   NV++Y+++I GL + GR  EA 
Sbjct: 499 LMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAF 558

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            L+ ++    + P    YSSLI    K G L  G    +N++ R
Sbjct: 559 KLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGL---ENVVDR 599



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 5/276 (1%)

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           +++ +D     GF  +  S    +  L + G +        Q++   +E  + ++++++D
Sbjct: 137 SLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVD 196

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIP 451
           G CK G++    +L D ++ +G KP  +  + L+NG +     G          +  +  
Sbjct: 197 GLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDY 256

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+  +  L++   R  +  +  KLF  M    I+PDV  +T +I      G++  A +LF
Sbjct: 257 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLF 316

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M +R L P+  TY A+I+G  K   +     M   M+  GV  +  I+N L++   K+
Sbjct: 317 DEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK 376

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             +D AL+L   +  +G E D  T N I  G+C  N
Sbjct: 377 GMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSN 412



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 14/202 (6%)

Query: 111 FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQY 166
           F C+   +   + R  + +E+  +   M + G+  +P++V    S L+D      +  + 
Sbjct: 399 FTCN--IIASGFCRSNRREEAKRLLLTMEERGV--APNVVS--FSILIDIYCKEQNFAEA 452

Query: 167 YKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
            +L + M  KG       Y   +    +KG +E A+ +  ++ +RG +P+  T   ++  
Sbjct: 453 RRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 512

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
              +G +  A  LF+ +  +G   NVVT++ +I+   K+ + ++AF+LY+ M +  +VPD
Sbjct: 513 ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPD 572

Query: 283 LIIYSILIDGLFKAGRLKEGNE 304
             IYS LI  L K G L  G E
Sbjct: 573 DGIYSSLIASLHKVGPLVSGLE 594



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 3/129 (2%)

Query: 480 GMYNIKPDVITH--TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
           G +N +P ++     +L R         S++ +F    K+G   D  +    +  L +  
Sbjct: 109 GEFN-EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSG 167

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           N+ + +   + M  +G+   +  +  +++ L K+  +  A  L  +L  +G +P +ITYN
Sbjct: 168 NMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 227

Query: 598 TIICGYCSL 606
           T++ GY  +
Sbjct: 228 TLLNGYIEI 236


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 245/498 (49%), Gaps = 10/498 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S L++   + G ID + ++   +   G   +  +   L++ L     + +   L + M  
Sbjct: 327 SGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHS 386

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
                    Y  L++   ++G+++ A     ++I+ G    I   N ++   C  G +  
Sbjct: 387 MNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSA 446

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L+  ++  G +P   TF+TLI+ +CK+ ++EKAF+LY  M E ++ P +  ++ LI 
Sbjct: 447 AEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIY 506

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL     + E ++L    ++R +K   V ++ +++ Y    ++ +A +  + ML+ G +P
Sbjct: 507 GLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVP 566

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  +Y  LI GLC  GR+  A      +  + L+ + + YS+L+ G+C  G+L +  S  
Sbjct: 567 DTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSAS 626

Query: 412 DNMIKRGLKPDAVVCSLLINGLMG--DALRFFFQSVRM---TLIPNLFIFNTLMDGCCRL 466
             MI+RG+  D V  ++LI+G M   D  R F    +M    L P+  I+ +++D   + 
Sbjct: 627 CEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKE 686

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                + +   LM      P+V+T+T  + G+   G +  A  LF +ML   ++P+ +TY
Sbjct: 687 GSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTY 746

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
              +  L K  N+     +   M + G+  + A YN+L+    K   L  A K+  ++T+
Sbjct: 747 GCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTE 805

Query: 587 RGLEPDIITYNTIICGYC 604
            G+ PD ITY+TII  +C
Sbjct: 806 NGIFPDCITYSTIIYEHC 823



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 233/492 (47%), Gaps = 16/492 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS--CLVDSNSVGQ--YYKLC 170
           YS LI+++ + G +D +   F  M + GI  +      L++  C     S  +  Y K+ 
Sbjct: 396 YSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMI 455

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     +  L++G  +   +E AF ++R++ ++   P++ T   ++  LC   ++ 
Sbjct: 456 NEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMA 515

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS LFD ++    KP  VT++ +I  +CK   ++KAF+L   M+   LVPD   Y  LI
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL   GR+    + +     + LKL+ + +S+++  Y G G +  A+     M+  G  
Sbjct: 576 SGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGIN 635

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +++ +++LI G  +Q  +    GL  ++  + L P  + Y+S+ID + K G  +     
Sbjct: 636 MDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGEC 695

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            D M+     P+ V  +  +NGL     +  A   F + +   + PN   +   +D   +
Sbjct: 696 LDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTK 755

Query: 466 ---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
              +K ATD +   ML G+     +  T+ +LIRG    G L  A  +  +M + G+ PD
Sbjct: 756 EGNMKEATD-LHHEMLKGLL---ANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPD 811

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            ITYS II+   +  ++   + ++  M R GV PD   +N+L+        LD A +L  
Sbjct: 812 CITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRN 871

Query: 583 QLTDRGLEPDII 594
            +  RGL+P  I
Sbjct: 872 DMLSRGLKPRQI 883



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 217/445 (48%), Gaps = 9/445 (2%)

Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           +++R KG       Y  L+ G  R    ++   +  ++++ GFVP     + ++  L   
Sbjct: 277 KSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKK 336

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G I +A  L   L   G  PN+  ++ LINA CK   L+KA  LY  M  M+L  + + Y
Sbjct: 337 GNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTY 396

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           SILID   K G L          ++ G++  +  ++S+++ +   GD+  A   Y +M+N
Sbjct: 397 SILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMIN 456

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P   +++ LI G C+  ++ +A  L+ ++  + + PS+ T+++LI G C + ++ +
Sbjct: 457 EGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAE 516

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              L+D M++R +KP  V  +++I G      M  A       +   L+P+ + +  L+ 
Sbjct: 517 ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C   R +        +   N+K + + ++ L+ G   QG L+ A+    +M++RG+  
Sbjct: 577 GLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINM 636

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D++ ++ +I G  K +++     + K M   G+ PD  IY  +++   KE +   + +  
Sbjct: 637 DLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECL 696

Query: 582 GQLTDRGLEPDIITYNTIICGYCSL 606
             +      P+++TY   + G C +
Sbjct: 697 DLMVTEKCFPNVVTYTAFMNGLCKV 721



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 150/624 (24%), Positives = 280/624 (44%), Gaps = 43/624 (6%)

Query: 3   LKFKNLLTVWRSINKCYCSES---KTHISDLQFNQANAILANLI-KTNNPTPAIQFFKWT 58
           L+F N L + +++N    S +      + +  F  AN++L  L+ + ++P    + F  +
Sbjct: 80  LRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLES 139

Query: 59  H-NCVSSPNIAQ--LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRL-FRDSLGDFGCD 114
           H  C  S  +    L+H  LQ+      + VFD +V+         RL   ++L      
Sbjct: 140 HKQCKFSSTLGFDFLVHSYLQN------TRVFDAVVV--------LRLMLGNTLLPEVRT 185

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA-- 172
            S ++   +RI K     E+F    + G+   P       +C     S+ +    CRA  
Sbjct: 186 LSAILNGLLRIRKFILVWEVFDESVNAGVKPDP------YTCSAVIRSLCELKDFCRAKE 239

Query: 173 ----MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
               M    F      Y  L++GL + G +  A  + + + ++G   ++VT   ++   C
Sbjct: 240 KILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFC 299

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
              Q  +   L + ++ +G  P     S L++   K+  ++ A+ L   +     +P+L 
Sbjct: 300 RVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLF 359

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           +Y+ LI+ L K   L +   L        L L+ V +S ++D++   G +  A   + RM
Sbjct: 360 VYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRM 419

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +  G    +  Y+ LI G C+ G L  A  L+ +++   LEP+  T+++LI G+CK  ++
Sbjct: 420 IEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQV 479

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
              F LY  M ++ + P     + LI GL     M +A + F + V   + P    +N +
Sbjct: 480 EKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVM 539

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           ++G C+        +L   M    + PD  T+  LI G+ S G +S+A      + K+ L
Sbjct: 540 IEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNL 599

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             + + YSA++HG      ++  L     M + G+  D+  + VL++  +K+ ++     
Sbjct: 600 KLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFG 659

Query: 580 LFGQLTDRGLEPDIITYNTIICGY 603
           L  ++ D+GL PD + Y ++I  Y
Sbjct: 660 LLKKMYDQGLRPDSVIYTSMIDAY 683



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 193/415 (46%), Gaps = 16/415 (3%)

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           F  +IVT N ++  LC  G +  A  +   L   G K +VVT+ TL+  FC+  + +   
Sbjct: 249 FDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGI 308

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            L N M+E+  VP     S L+DGL K G +    +L++     G   ++ V++++++A 
Sbjct: 309 CLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINAL 368

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
               D+ +A   Y  M +     N ++YSILI   C++G L  A   FG+++   +  ++
Sbjct: 369 CKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETI 428

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQ 443
             Y+SLI+G CK G L     LY  MI  GL+P A   + LI+G   D     A + + +
Sbjct: 429 YPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYRE 488

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                + P+++ F  L+ G C      +  KLF  M    IKP  +T+ V+I G     +
Sbjct: 489 MNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHN 548

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A  L   ML  GL PD  TY  +I GL     +S        + +  +  +   Y+ 
Sbjct: 549 MDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSA 608

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
           LL+    +  L  AL    ++  RG+  D++ +           + LIDG  K Q
Sbjct: 609 LLHGYCGQGRLTEALSASCEMIQRGINMDLVCH-----------AVLIDGAMKQQ 652



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 196/399 (49%), Gaps = 22/399 (5%)

Query: 232 ASSLFDVLLLVGPKPNVV-----------------TFSTLINAFCKEAKLEKAFQLYNLM 274
           A+SL   LLL G  P  V                  F  L++++ +  ++  A  +  LM
Sbjct: 115 ANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLM 174

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +   L+P++   S +++GL +  +     E+   +++ G+K D    S+V+ +   + D 
Sbjct: 175 LGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDF 234

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
            RA +    M +  F  ++++Y++LI GLC+ G ++EA  +   +  + L+  ++TY +L
Sbjct: 235 CRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTL 294

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           + GFC+  +  DG  L + M++ G  P     S L++GL     +  A     +  R   
Sbjct: 295 VLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGF 354

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
           +PNLF++N L++  C+ +       L+  M   N+  + +T+++LI     +G L  A  
Sbjct: 355 LPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAES 414

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
            F +M++ G+   +  Y+++I+G  K  ++S    ++  M   G+ P    +  L++   
Sbjct: 415 YFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYC 474

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           K+  ++ A KL+ ++ ++ + P + T+  +I G CS N 
Sbjct: 475 KDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNE 513



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/453 (24%), Positives = 207/453 (45%), Gaps = 41/453 (9%)

Query: 51  AIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDS 107
           A + ++  +    +P++     LI+ L  ++    AS +FD+MV +  K           
Sbjct: 482 AFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEV------- 534

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
                  Y+ +IE Y +   +D++ E+   M   G+       + L+S L  +  V    
Sbjct: 535 ------TYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAK 588

Query: 168 KLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
                +  K   +    Y  L++G   +G +  A     ++IQRG   ++V C+ +L   
Sbjct: 589 DFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLV-CHAVLIDG 647

Query: 224 CINGQIGNASSLFDVLLLV---GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
            +  Q  +   LF +L  +   G +P+ V ++++I+A+ KE   +K+ +  +LM+     
Sbjct: 648 AMKQQ--DMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCF 705

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+++ Y+  ++GL K G +     L    L   +  + V +   +D+    G++  A   
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           +  ML G  L N  +Y+ILI+G C+ GRL+EA  +  ++    + P  +TYS++I   C+
Sbjct: 766 HHEMLKG-LLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCR 824

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIP---- 451
           SG +     L+D M+++G++PD+V  +LLI     NG +  A       +   L P    
Sbjct: 825 SGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQIL 884

Query: 452 -----NLFIFNTLMDGCCRLKRATDTVKLFMLM 479
                +L + N LM G C        ++L+  M
Sbjct: 885 QLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSM 917



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 38/196 (19%)

Query: 81  DVASHVFDKMVI-QFGKTYNFFRLFRDSLGDFG--------------------CDYSFLI 119
           D A H+F+KM+          +  F DSL   G                      Y+ LI
Sbjct: 725 DRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILI 784

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG 177
             + ++G++ E+ ++ + M++ GI+  PD +    ++     S  VG   +L   M  KG
Sbjct: 785 RGFCKLGRLIEATKVLSEMTENGIF--PDCITYSTIIYEHCRSGDVGAAVELWDTMLRKG 842

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP---------NIVTCNKILKRLC 224
                  +  L+ G    G ++ AF +   ++ RG  P         ++  CN ++   C
Sbjct: 843 VEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGC 902

Query: 225 INGQIGNASSLFDVLL 240
           + G++  A  L+  +L
Sbjct: 903 VTGEVDTALRLYHSML 918


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 214/429 (49%), Gaps = 8/429 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++  L  +G +  A  +  ++IQ+G +P+++T N ++  LC  G +  A +L   +L +G
Sbjct: 137 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 196

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P PN  TF+T I  +C    ++KA  L++ M    + P+ + Y+ILI  L K G LK+  
Sbjct: 197 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDAR 256

Query: 304 ELLLTALDRGL---KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +LL   LD        D++  +  MD  +  GD+ +A+  +D ML  G   +V++Y++LI
Sbjct: 257 KLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLI 316

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C    +  A   F ++  R L P + TY++LI GFCK G L +   ++  M K G  
Sbjct: 317 HGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAA 376

Query: 421 PDAVVCSLLINGL--MGDALR---FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD +   ++I GL   GD +R   F    +   ++P   I+N ++DG  R    ++ + +
Sbjct: 377 PDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSI 436

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M  + I P+V T+  LI      G++  A  +  +ML  G+ PDV+TY+ +I     
Sbjct: 437 RDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACN 496

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              I   L ++  M R G  PDI  Y  L+       ++  A +L  +L   GL  D   
Sbjct: 497 FGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAP 556

Query: 596 YNTIICGYC 604
           +  +I  YC
Sbjct: 557 FQILIQKYC 565



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 200/395 (50%), Gaps = 43/395 (10%)

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
            +I   C E KL  A  L N M++  ++PD++ ++ L++GL KAG L++ + L+   L+ 
Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G   +   F++ +  Y    +V +A+  +  M N G  PN ++Y+ILI  LC++G L +A
Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 255

Query: 373 CGLFGQVL---IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
             L  ++L     +    ++T +  +DG  K G +      +D M++RG + D V  ++L
Sbjct: 256 RKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVL 315

Query: 430 INGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I+G      M  A R+F +  +  L+P++F +NTL+ G C++    +   +  +M     
Sbjct: 316 IHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGA 375

Query: 485 KPDVITHTVLIRGI-----------------------------------ASQGSLSSAIL 509
            PD+I++ ++I+G+                                      G LS+A+ 
Sbjct: 376 APDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALS 435

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           +  QM+  G+ P+V TY+A+IH   KG NI     + K M  NG+ PD+  YN+L+    
Sbjct: 436 IRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAAC 495

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
               +  AL+L+ ++  RG EPDIITY  +I G+C
Sbjct: 496 NFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFC 530



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 204/394 (51%), Gaps = 8/394 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            + +L+NGL + G +E A ++ R++++ G  PN  T N  +K  C+N  +  A  LF  +
Sbjct: 168 THNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTM 227

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL---VPDLIIYSILIDGLFKA 296
              G  PN VT++ LI+A CK+  L+ A +L   +++ D      D+I  +I +DG  K 
Sbjct: 228 ANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKK 287

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G + +        L RG ++DVV ++ ++  +  I D+  A + +  M   G LP++ +Y
Sbjct: 288 GDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTY 347

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI G C+ G L EAC + G +      P L++Y  +I G C  G +         M++
Sbjct: 348 NTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLE 407

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             + P+ ++ +++I+G      + +AL    Q V   + PN+F +N L+    +     D
Sbjct: 408 NLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVD 467

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              +   M +  I PDV+T+ +LI    + G +  A+ L+ +ML+RG  PD+ITY+ +I 
Sbjct: 468 AHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIR 527

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           G     ++     +   ++R+G++ D A + +L+
Sbjct: 528 GFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILI 561



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 183/376 (48%), Gaps = 15/376 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM- 173
           ++  I+ Y     +D+++ +F+ M++ GI  +      L+  L     +    KL   + 
Sbjct: 204 FNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKIL 263

Query: 174 ------RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                            M+G L+KG +  A     +++QRG   ++V  N ++   C+  
Sbjct: 264 DDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQ 323

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            + +A   F  +   G  P++ T++TLI+ FCK   L++A  ++ +M +M   PDLI Y 
Sbjct: 324 DMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYK 383

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ++I GL   G +   N+ L+  L+  +  + ++++ V+D +   GD+  A+   D+M++ 
Sbjct: 384 MIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSF 443

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PNV +Y+ LI    + G +V+A  +  ++L+  + P ++TY+ LI   C  G++   
Sbjct: 444 GIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFA 503

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             LYD M++RG +PD +  + LI G      + +A     +  R  L  +   F  L+  
Sbjct: 504 LRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQK 563

Query: 463 CCRLK---RATDTVKL 475
            CR +   RA D  KL
Sbjct: 564 YCRTRVPGRAYDLTKL 579



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 14/234 (5%)

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRM 447
           ++I   C  GKLR    L + MI++G+ PD +  + L+NGL   GD   A     + + +
Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
              PN   FNT + G C        + LF  M    I P+ +T+ +LI  +  +G L  A
Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 255

Query: 508 ILLFFQMLKRGL---TPDVITYSAIIHG-LFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
             L  ++L       T D+IT +  + G L KG  +   +H  ++++R G   D+  YNV
Sbjct: 256 RKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQR-GTQIDVVAYNV 314

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL----NSCLIDG 613
           L++      ++++A + F ++  RGL PDI TYNT+I G+C +     +C I G
Sbjct: 315 LIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHG 368


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 236/485 (48%), Gaps = 43/485 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I +YV+   ++ S+  F  M D G     +    L++ +V S+S  Q++      +
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 175 GKGFC-VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            K    VY F  L+ G    G IE +F +  ++ + GF                      
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGF---------------------- 194

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
                         PNVV ++TLI+  CK+ ++EKA  L+  M ++ LV +   Y++LI+
Sbjct: 195 -------------SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN 241

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GLFK G  K+G E+     + G+  ++  ++ VM+     G    A Q +D M   G   
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N+++Y+ LI GLC++ +L EA  +  Q+    + P+L+TY++LIDGFC  GKL    SL 
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361

Query: 412 DNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
            ++  RGL P  V  ++L++G    GD   A +   +     + P+   +  L+D   R 
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                 ++L + M    + PDV T++VLI G   +G ++ A  LF  M+++   P+ + Y
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I G  K  +    L + K ME   +AP++A Y  ++ +L KE     A +L  ++ D
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMID 541

Query: 587 RGLEP 591
            G++P
Sbjct: 542 SGIDP 546



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 196/380 (51%), Gaps = 6/380 (1%)

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           S F+ ++  G  P    F+ L+      +   + +  +N   +  +V D+  + ILI G 
Sbjct: 115 SYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN-ENKSKVVLDVYSFGILIKGC 173

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            +AG +++  +LL+   + G   +VV++++++D     G++ +A   +  M   G + N 
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE 233

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            +Y++LI GL + G   +   ++ ++    + P+L TY+ +++  CK G+ +D F ++D 
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M +RG+  + V  + LI GL     + +A +   Q     + PNL  +NTL+DG C + +
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               + L   +    + P ++T+ +L+ G   +G  S A  +  +M +RG+ P  +TY+ 
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I    +  N+   + +   ME  G+ PD+  Y+VL++    +  ++ A +LF  + ++ 
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473

Query: 589 LEPDIITYNTIICGYCSLNS 608
            EP+ + YNT+I GYC   S
Sbjct: 474 CEPNEVIYNTMILGYCKEGS 493



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 185/386 (47%), Gaps = 7/386 (1%)

Query: 225 INGQIGNASSLFDVLLLV-GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           I+ Q   +SSL   L      K     +  +IN++ +   L  +   +N M++   VP  
Sbjct: 70  IHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGS 129

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
             ++ L+  +  +    +          + + LDV  F  ++      G++ ++      
Sbjct: 130 NCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIE 188

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           +   GF PNV+ Y+ LI G C++G + +A  LF ++    L  +  TY+ LI+G  K+G 
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248

Query: 404 LRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNT 458
            + GF +Y+ M + G+ P+      V+  L  +G   DA + F +     +  N+  +NT
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+ G CR  +  +  K+   M    I P++IT+  LI G    G L  A+ L   +  RG
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           L+P ++TY+ ++ G  +  + S    M K ME  G+ P    Y +L++   +  N++ A+
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYC 604
           +L   + + GL PD+ TY+ +I G+C
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFC 454



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 132/292 (45%), Gaps = 31/292 (10%)

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
           K    ++  ++++YV    +  ++  ++ M++ GF+P    ++ L+  +       +   
Sbjct: 91  KTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS 150

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
            F +    ++   + ++  LI G C++G++   F L   + + G  P             
Sbjct: 151 FFNENK-SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSP------------- 196

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
                            N+ I+ TL+DGCC+         LF  MG   +  +  T+TVL
Sbjct: 197 -----------------NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+   G       ++ +M + G+ P++ TY+ +++ L K         +F  M   GV
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + +I  YN L+  L +E  L+ A K+  Q+   G+ P++ITYNT+I G+C +
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 8/219 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ +  +GK+ +++ +   +   G  LSP LV    L+S            K+ + 
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRG--LSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  L++   R   +E A  +   + + G VP++ T + ++   CI GQ
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  AS LF  ++    +PN V ++T+I  +CKE    +A +L   M E +L P++  Y  
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           +I+ L K  + KE   L+   +D G+     + S +  A
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 243/505 (48%), Gaps = 34/505 (6%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           ++F   +      Y+ +I  + R   +D ++++F  M+  G   +      L++ L DS 
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNG----LLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            V + + L R M   G         G    L   G  E+A+ +   +  +G  PN+ T  
Sbjct: 300 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++  LC++G +  A  LF  +   G  PN VT++ LIN   +  +++ AF + NLM   
Sbjct: 360 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              P+++ Y+ +I G    G  K+   ++   L RG   ++V +++++  Y   G+   A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++  D M +GG  P+  SY+ LI G C+  ++  A GLF +++   L P+ +TY++LIDG
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
           +CK  KL    SL ++M + G +                              PN+  +N
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCR------------------------------PNVQTYN 569

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            L+ G  +    +   +L  +M    I P+V+T+T +I G+   GS S A+ +F +M+++
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G  P+++TYS++I  L +   +    ++F  +ER+G+ PD   Y  ++   I    ++ A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 578 LKLFGQLTDRGLEPDIITYNTIICG 602
               G++   G +P + TY  +I G
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 230/503 (45%), Gaps = 40/503 (7%)

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHM 200
           MG++    L+  L    + +  + +Y+++          +Y  ++N L + G + +A  +
Sbjct: 178 MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETI 237

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
            ++V +    P+  T   ++   C    + +A  +F+ +   G +PN VT+STLIN  C 
Sbjct: 238 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 297

Query: 261 EAKLEKAFQL--------------------------------YNLMMEMD---LVPDLII 285
             ++ +AF L                                + L ++M      P++  
Sbjct: 298 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LI GL  +G LK    L       G+  + V ++++++  V    +  A    + M 
Sbjct: 358 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  PN+++Y+ +IKG C  G   +A  +   +L R    +L+TY+++I G+C SG   
Sbjct: 418 RNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTT 477

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
               + D M   G KPD    + LI G      M  A   F + V   L PN   +  L+
Sbjct: 478 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 537

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG C+ ++      L   M     +P+V T+ VLI G+  Q + S A  L   M++ G+ 
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+V+TY+A+I GL K  + S+ L MF  M   G  P++  Y+ L+  L +E  ++ A  L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 581 FGQLTDRGLEPDIITYNTIICGY 603
           F +L   GL PD ITY  +I  Y
Sbjct: 658 FAELERHGLIPDEITYVKMIEAY 680



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 185/376 (49%), Gaps = 5/376 (1%)

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           S  D+L   G +  +  +S L+    +          Y+ M+   + P+L+IY+ +I+ L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G + +   ++    +  +  D   ++S++  +    D+  A+Q +++M   G  PN 
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++YS LI GLC  GR+ EA  L  ++++  + P+  T +  I   C  G   D + L+ +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 414 MIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M  +G +P+     A++  L ++GL+  A+  F +  R  + PN   +N L++     +R
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 +  LMG     P+++T+  +I+G    G    A+L+   ML+RG + +++TY+ 
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           II G     N +  L +  LM   G  PD   Y  L+    K   +++A  LF ++ D G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 589 LEPDIITYNTIICGYC 604
           L P+ +TY  +I GYC
Sbjct: 526 LCPNEVTYTALIDGYC 541



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 256/562 (45%), Gaps = 65/562 (11%)

Query: 101 FRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS 155
           +RLF D + + GC+     Y+ LI      G +  ++ +F  MS  G++ +      L++
Sbjct: 340 WRLFVD-MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 156 CLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
            LV++  + +Y  +   + G+  C      Y  ++ G    G  + A  +   ++QRG  
Sbjct: 399 ILVENRRI-KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
            N+VT N I+K  C +G   +A  + D++   G KP+  +++ LI  FCK +K+E AF L
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGL 517

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRL------------------------------K 300
           +N M++  L P+ + Y+ LIDG  K  +L                              K
Sbjct: 518 FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577

Query: 301 EGN-----ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           + N     EL    ++ G+  +VV +++++D     G    A++ +++M+  G LPN+++
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 637

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           YS LI+ L Q+G++ EA  LF ++    L P  +TY  +I+ +  SGK+   F+    MI
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 697

Query: 416 KRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           K G +P      +LI GL  +   +     R+  +P+      ++  C    + TD   +
Sbjct: 698 KAGCQPTLWTYGVLIKGLKNE---YLLADQRLAALPD------VVPNCSFGYQTTDQDAV 748

Query: 476 -FMLMGMYNIKP--DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             M   +  + P   V     L+  +++ G    A  L   M+ +GL PD   Y++++  
Sbjct: 749 SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCS 808

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L + +N+ + + +FK M   G    +  Y  L+  L +      A   F  +  R   PD
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 593 IITYNTIICGYCSLNSCLIDGY 614
            +    +I G       L DGY
Sbjct: 869 DVVQAVLIDGL------LRDGY 884



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 191/412 (46%), Gaps = 46/412 (11%)

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           +  +L  G +PN++ ++ +INA CK+  +  A  +   + E ++ PD   Y+ +I G  +
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD---RMLNGGFLPN 352
              L    ++       G + + V +S++++   G+ D GR  + +D    M+  G LP 
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLIN---GLCDSGRVNEAFDLIREMILHGILPT 319

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             + +  I  LC  G   +A  LF  +  +  EP++ TY++LI G C SG L+    L+ 
Sbjct: 320 AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH 379

Query: 413 NMIKRGLKPDAVVCSLLIN---------------GLMG---------------------- 435
            M + G+ P+ V  + LIN                LMG                      
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 436 ---DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
               A+      ++     NL  +NT++ G C     T  +++  LM     KPD  ++T
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G      + SA  LF +M+  GL P+ +TY+A+I G  K + +     + + M+R+
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           G  P++  YNVL++ L K+ N   A +L   + + G+ P+++TY  +I G C
Sbjct: 560 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 34/318 (10%)

Query: 293 LFKAGRLKEGNELLLTALD----RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L K+   KE     ++ LD     GL++ +  +S+++     +G     +  Y RML+ G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN++ Y+ +I  LC+ G + +A  +  +V    + P   TY+S+I G C+   L    
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            +++ M K G +P+ V                               ++TL++G C   R
Sbjct: 271 QVFNQMAKEGCEPNTVT------------------------------YSTLINGLCDSGR 300

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   L   M ++ I P   T T  I  +   G    A  LF  M  +G  P+V TY+A
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I GL     + V + +F  M R+GV P+   YN L+N+L++   +  A  +   +   G
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 589 LEPDIITYNTIICGYCSL 606
             P+I+TYN +I GYC L
Sbjct: 421 CSPNIVTYNEMIKGYCIL 438



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 167/387 (43%), Gaps = 48/387 (12%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           +  K  + F LF + + D  C     Y+ LI+ Y +  K+D +  +  +M   G   +  
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
               L+  L   N+     +LC+ M  +G       Y  +++GL + G    A  M  ++
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           I++G +PN++T + +++ L   G++  A +LF  L   G  P+ +T+  +I A+    K+
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV---- 320
           E AF     M++    P L  Y +LI GL         NE LL         DVV     
Sbjct: 687 EHAFNFLGRMIKAGCQPTLWTYGVLIKGL--------KNEYLLADQRLAALPDVVPNCSF 738

Query: 321 --------FSSVMDAYVGIGDVGRAVQTYD--------------------RMLNGGFLPN 352
                     SVM A +   D G +VQ  +                     M++ G  P+
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             +Y+ L+  L +   +  A G+F  +  +  E  L  Y  LI   C+  + ++    ++
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALR 439
           NM+ R   PD VV ++LI+GL+ D  +
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYK 885


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 239/475 (50%), Gaps = 15/475 (3%)

Query: 142 GIYLSPDLVQR----LMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKG 192
           G +  P +V++    L    +D+       ++    R KGF +     +EFL+  L R G
Sbjct: 113 GEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLL-ALKRSG 171

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            +E      RQ++  G    + +   ++  LC  G++  A +L D L+  G KP+V+T++
Sbjct: 172 NMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 231

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           TL+N + +   +    ++ +LM +  +  ++  Y++LI+   ++ +++E  +L    L +
Sbjct: 232 TLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK 291

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G++ DV +++S+++     G++ RA   +D M     +PN  +Y  LI G C+ G +  A
Sbjct: 292 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 351

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             +   +  + ++ + + +++L+DG+CK G + +   L + M ++G + DA  C+++ +G
Sbjct: 352 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASG 411

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                   +A R         + PN+  F+ L+D  C+ +   +  +LF +M      P 
Sbjct: 412 FCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPS 471

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           V+T+   I     +G +  A  L  +M +RGL PD  TY+++I G     N+   L +F 
Sbjct: 472 VVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFN 531

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            M + G+  ++  Y V+++ L K+   D A KL+ ++   G+ PD   Y+++I  
Sbjct: 532 EMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIAS 586



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 222/480 (46%), Gaps = 54/480 (11%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           CD  F +  Y+     D S+E+F Y    G  +        +  L  S ++    +  R 
Sbjct: 125 CDMLFRV--YMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQ 182

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL-------- 220
           M   G     C +  +++GL +KG +  A  +  +++ +GF P+++T N +L        
Sbjct: 183 MVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKD 242

Query: 221 ---------------------------KRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
                                      +    + +I  A  LFD +L  G +P+V  +++
Sbjct: 243 VGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTS 302

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +IN  CK   +++AF L++ M E  LVP+   Y  LI+G  KAG +K    ++     +G
Sbjct: 303 IINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKG 362

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           + ++ V+F+++MD Y   G +  A++  + M   GF  +  + +I+  G C+  R  EA 
Sbjct: 363 VDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAK 422

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
            L   +  R + P+++++S LID +CK     +   L+  M K+G  P  V  +  I   
Sbjct: 423 RLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERY 482

Query: 432 ---GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV----KLFMLMGMYNI 484
              G M +A +   +     L+P+ + + +L+DG    +RA+  V    +LF  M    +
Sbjct: 483 CKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG----ERASGNVDRALELFNEMPQLGL 538

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
             +V+T+TV+I G++  G    A  L+ +M K G+ PD   YS++I  L K   +  GL 
Sbjct: 539 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 598



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 157/321 (48%), Gaps = 11/321 (3%)

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L ++G ++   E L   +D G+++ V  +++V+D     G+V RA    D ++  GF P
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225

Query: 352 NVISYSILIKGLCQ---QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           +VI+Y+ L+ G  +    G + E   L  + ++   + ++ TY+ LI+ + +S K+ +  
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVV---DYNVTTYTMLIEWYSRSSKIEEAE 282

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D M+K+G++PD  + + +IN     G M  A   F +     L+PN + +  L++G 
Sbjct: 283 KLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGA 342

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+         +   M    +  + +    L+ G   +G +  A+ L   M ++G   D 
Sbjct: 343 CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDA 402

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            T + I  G  +         +   ME  GVAP++  +++L+++  KE N   A +LF  
Sbjct: 403 FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKV 462

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           +  +G  P ++TYN  I  YC
Sbjct: 463 MEKKGKAPSVVTYNAFIERYC 483



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 163/344 (47%), Gaps = 46/344 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL---------------VQR---LMSC 156
           Y+ LIE Y R  KI+E+ ++F  M   GI   PD+               ++R   L   
Sbjct: 265 YTMLIEWYSRSSKIEEAEKLFDEMLKKGI--EPDVYIYTSIINWNCKFGNMKRAFVLFDE 322

Query: 157 LVDSNSVGQYYK-------LCRA------------MRGKGF----CVYEFLMNGLLRKGV 193
           + +   V   Y         C+A            M+ KG      ++  LM+G  +KG+
Sbjct: 323 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 382

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           I+ A  +   + Q+GF  +  TCN I    C + +   A  L   +   G  PNVV+FS 
Sbjct: 383 IDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSI 442

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI+ +CKE    +A +L+ +M +    P ++ Y+  I+   K G+++E  +L+    +RG
Sbjct: 443 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 502

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L  D   ++S++D     G+V RA++ ++ M   G   NV++Y+++I GL + GR  EA 
Sbjct: 503 LMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAF 562

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            L+ ++    + P    YSSLI    K G L  G    +N++ R
Sbjct: 563 KLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGL---ENVVDR 603



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 5/276 (1%)

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           +++ +D     GF  +  S    +  L + G +        Q++   +E  + ++++++D
Sbjct: 141 SLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVD 200

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIP 451
           G CK G++    +L D ++ +G KP  +  + L+NG +     G          +  +  
Sbjct: 201 GLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDY 260

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+  +  L++   R  +  +  KLF  M    I+PDV  +T +I      G++  A +LF
Sbjct: 261 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLF 320

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M +R L P+  TY A+I+G  K   +     M   M+  GV  +  I+N L++   K+
Sbjct: 321 DEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK 380

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             +D AL+L   +  +G E D  T N I  G+C  N
Sbjct: 381 GMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSN 416



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 14/202 (6%)

Query: 111 FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQY 166
           F C+   +   + R  + +E+  +   M + G+  +P++V    S L+D      +  + 
Sbjct: 403 FTCN--IIASGFCRSNRREEAKRLLLTMEERGV--APNVVS--FSILIDIYCKEQNFAEA 456

Query: 167 YKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
            +L + M  KG       Y   +    +KG +E A+ +  ++ +RG +P+  T   ++  
Sbjct: 457 RRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 516

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
              +G +  A  LF+ +  +G   NVVT++ +I+   K+ + ++AF+LY+ M +  +VPD
Sbjct: 517 ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPD 576

Query: 283 LIIYSILIDGLFKAGRLKEGNE 304
             IYS LI  L K G L  G E
Sbjct: 577 DGIYSSLIASLHKVGPLVSGLE 598



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 3/129 (2%)

Query: 480 GMYNIKPDVITH--TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
           G +N +P ++     +L R         S++ +F    K+G   D  +    +  L +  
Sbjct: 113 GEFN-EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSG 171

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           N+ + +   + M  +G+   +  +  +++ L K+  +  A  L  +L  +G +P +ITYN
Sbjct: 172 NMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 231

Query: 598 TIICGYCSL 606
           T++ GY  +
Sbjct: 232 TLLNGYIEI 240


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 259/572 (45%), Gaps = 61/572 (10%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTP-AIQFFKWTHNCVSSPNIAQLIHVLLQSDMRD 81
           S+ H    + N   +   +L+   NPTP   QF K   + V + + +  + +  Q ++  
Sbjct: 32  SQLHHKQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNG 91

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           + S  F         T+N                  LI  + ++G    S  IFA +   
Sbjct: 92  IESDFF---------TFNI-----------------LINCFSQLGLNSLSFSIFAKILKK 125

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENA 197
           G + +      L+  L     + Q       +  +GF +    Y  L+NGL + G I  A
Sbjct: 126 GYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAA 185

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
             + ++V  +   PN V  N I+  +C    + +A  L+  ++     P+V T++ LI+ 
Sbjct: 186 LQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISG 245

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           F   +KL  A  L+N M + ++ P++  ++IL+DG  K G++ +   +L   +   +K D
Sbjct: 246 FSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPD 305

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           VV ++S+MD Y  I  V +A   +D M +GG + NV  Y+ ++ G C+   + EA  LF 
Sbjct: 306 VVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFE 365

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
           ++  R++ P+++TYSSLIDG CK G++     L D M  RG +P                
Sbjct: 366 EMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG-QP---------------- 408

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                        PN+  +++++D  C+       + L   +    I+PD+ T+T+LI+G
Sbjct: 409 -------------PNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKG 455

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G L  A  +F  +L +G   DV  Y+ +I G          L +   ME NG  P+
Sbjct: 456 LCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
              Y +++  L ++   D A KL  ++  RGL
Sbjct: 516 AKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 229/458 (50%), Gaps = 34/458 (7%)

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
            +++S LV +        L + M   G    F  +  L+N   + G+   +F +  ++++
Sbjct: 65  NKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILK 124

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G+ P  +T N ++K LC+ G I  A    D ++  G   + V++ TLIN  CK  ++  
Sbjct: 125 KGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITA 184

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A QL   +    + P+ ++Y+++ID + KA  + +  +L    + + +  DV  +++++ 
Sbjct: 185 ALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALIS 244

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            +  +  +  A+  +++M      PNV +++IL+ G C++G++ +A  +   ++   ++P
Sbjct: 245 GFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKP 304

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
            ++TY+SL+DG+C   K+     ++D+M   G+                           
Sbjct: 305 DVVTYNSLMDGYCSINKVNKAKDIFDSMASGGV--------------------------- 337

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              I N+ I+ T+++G C++K   + + LF  M    I P+V+T++ LI G+   G +  
Sbjct: 338 ---IANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFY 394

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A+ L  +M  RG  P+++TYS+I+  L K  ++   + +   ++  G+ PD+  Y +L+ 
Sbjct: 395 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIK 454

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L +   L+ A  +F  L  +G   D+  Y  +I G+C
Sbjct: 455 GLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFC 492



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 197/407 (48%), Gaps = 5/407 (1%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           ++ +   P     NKIL  L        A SL   + L G + +  TF+ LIN F +   
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
              +F ++  +++    P  I ++ LI GL   G + +        + +G  LD V + +
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           +++    +G +  A+Q   R+      PN + Y+++I  +C+   + +A  L+ Q++ +R
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           + P + TY++LI GF    KL     L++ M K  + P+    ++L++G      + DA 
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
                 ++  + P++  +N+LMDG C + +      +F  M    +  +V  +T ++ G 
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                +  AI LF +M  R + P+V+TYS++I GL K   I   L +   M   G  P+I
Sbjct: 352 CKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNI 411

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             Y+ +L+ L K  ++D A+ L   L D+G+ PD+ TY  +I G C 
Sbjct: 412 VTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQ 458



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 191/377 (50%), Gaps = 5/377 (1%)

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
           SS   +LL   P P    F+ ++++  K      A  L+  M    +  D   ++ILI+ 
Sbjct: 46  SSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINC 105

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
             + G       +    L +G     + F++++      G + +A+  +D+++  GF  +
Sbjct: 106 FSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLD 165

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
            +SY  LI GLC+ GR+  A  L  +V  + ++P+ + Y+ +ID  CK+  + D F LY 
Sbjct: 166 QVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYS 225

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M+ + + PD    + LI+G      +  A+  F +  +  + PN++ FN L+DG C+  
Sbjct: 226 QMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEG 285

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  D   +  +M   +IKPDV+T+  L+ G  S   ++ A  +F  M   G+  +V  Y+
Sbjct: 286 KVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYT 345

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +++G  K K +   +++F+ M    + P++  Y+ L++ L K   +  ALKL  ++ DR
Sbjct: 346 TMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDR 405

Query: 588 GLEPDIITYNTIICGYC 604
           G  P+I+TY++I+   C
Sbjct: 406 GQPPNIVTYSSILDALC 422



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 187/376 (49%), Gaps = 15/376 (3%)

Query: 244 PKPNVV--------TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           P PN +         FS L +   +E  L  +F   +L++  +  P    ++ ++  L K
Sbjct: 16  PNPNFIGLFPSSIRLFSQLHHKQDEENNLISSFN--HLLLHKNPTPPTFQFNKILSSLVK 73

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           A        L       G++ D   F+ +++ +  +G    +   + ++L  G+ P  I+
Sbjct: 74  AKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAIT 133

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           ++ LIKGLC +G + +A     +V+ +      ++Y +LI+G CK G++     L   + 
Sbjct: 134 FNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD 193

Query: 416 KRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            + ++P+AV+ +++I+      L+ DA   + Q V   + P++F +N L+ G   + +  
Sbjct: 194 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLN 253

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + LF  M   NI P+V T  +L+ G   +G ++ A ++   M+K  + PDV+TY++++
Sbjct: 254 YAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLM 313

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G      ++    +F  M   GV  ++ IY  ++N   K   +D A+ LF ++  R + 
Sbjct: 314 DGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKII 373

Query: 591 PDIITYNTIICGYCSL 606
           P+++TY+++I G C L
Sbjct: 374 PNVVTYSSLIDGLCKL 389



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 138/269 (51%), Gaps = 5/269 (1%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           +L+    P    ++ ++  L +      A  L  Q+ +  +E    T++ LI+ F + G 
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
               FS++  ++K+G  P A+  + LI GL     +  AL F  + V      +   + T
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L++G C++ R T  ++L   +    ++P+ + + ++I  +     ++ A  L+ QM+ + 
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           + PDV TY+A+I G      ++  + +F  M++  + P++  +N+L++   KE  ++ A 
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            +   +    ++PD++TYN+++ GYCS+N
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSIN 320


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 244/479 (50%), Gaps = 20/479 (4%)

Query: 145 LSPDLVQR--LMSCLVDSN-------SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIE 195
           ++PD+     L+SC  D+        ++GQ  K    +R      +  L+  L  K    
Sbjct: 9   VAPDIATFGILISCCCDAGCLNLGFAALGQIIK--TGLRADAV-AFTPLLRTLCAKKRTS 65

Query: 196 NAFHMH-RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK--PNVVTFS 252
           +A ++  R++ + G  P++ + + +LK LC   +   A+ L  ++   G    P+VV++S
Sbjct: 66  DAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYS 125

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           T+I+ F KE  + KA+ L+  M++  + P+++  + +IDGL K   + +   +L   +D 
Sbjct: 126 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 185

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            +  +   ++S++  Y+  G    AV+    M   G  PNV++Y++LI  LC+ G   EA
Sbjct: 186 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEA 245

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN- 431
             +F  ++    +P   TY SL+ G+   G L +  ++ D M++ G++ +    S+ I  
Sbjct: 246 REIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYA 305

Query: 432 ----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
               G + +A   F +  ++  +P++  + T++DG C++ R  D +  F  M    + P+
Sbjct: 306 YCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPN 365

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           +IT T LI G +  G    A  LF++M+ RG+ PDV  ++A+I  LFK   ++    +F 
Sbjct: 366 IITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFD 425

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           LM R G  P++  YN +++       +   +KL   +   GL+P  +T+NT++ G  S+
Sbjct: 426 LMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSM 484



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 242/542 (44%), Gaps = 59/542 (10%)

Query: 67  IAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIEN 121
           + Q+I   L++D   VA     + +    +T +   +    + + GC      YS L++ 
Sbjct: 36  LGQIIKTGLRADA--VAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKG 93

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF- 178
                K +E+ E+   M++ G    PD+V    ++        VG+ Y L   M   G  
Sbjct: 94  LCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIP 153

Query: 179 ---CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                   +++GL +   ++ A  + +Q+I    +PN  T N ++     +GQ   A  +
Sbjct: 154 PNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRI 213

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
              +   G +PNVVT++ LI+  CK     +A +++N M++    PD   Y  L+ G   
Sbjct: 214 LKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYAT 273

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G L E N +    +  G++ +   FS  + AY   G +  A  T+ +M   GF+P++++
Sbjct: 274 EGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVT 333

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ +I GLC+ GRL +A   F Q++   L P+++T+++LI GF   GK      L+  M+
Sbjct: 334 YTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMM 393

Query: 416 KRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            RG+ PD                                IF  ++D   +  + T+  KL
Sbjct: 394 DRGIPPDVT------------------------------IFTAMIDRLFKEGKVTEAQKL 423

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F LM     KP+V+++  +I G    G +   + L   ML  GL P  +T++ ++ G+  
Sbjct: 424 FDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM-- 481

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +S+GL            PD+     L++   ++  ++  L LF ++  +  + D IT
Sbjct: 482 ---VSMGLK-----------PDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 527

Query: 596 YN 597
            N
Sbjct: 528 EN 529



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 119/231 (51%), Gaps = 8/231 (3%)

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           +++ P + T+  LI   C +G L  GF+    +IK GL+ DAV  + L+  L       D
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 437 ALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM--YNIKPDVITHTV 493
           A+    + +  +   P++F ++TL+ G C  K+  +  +L  +M     N  PDV++++ 
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I G   +G +  A  LF +ML  G+ P+V+T +++I GL K + +     + + M    
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + P+   YN L++  +       A+++  +++  G  P+++TYN +I   C
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLC 237



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 3/161 (1%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI-L 509
           P++  F  L+  CC              +    ++ D +  T L+R + ++   S A+ +
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG--VAPDIAIYNVLLNM 567
           +  +M + G TPDV +YS ++ GL   K       +  +M  +G    PD+  Y+ +++ 
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
             KE ++  A  LF ++ D G+ P+++T N++I G C + +
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA 171


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 216/434 (49%), Gaps = 12/434 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L++    KG + +A      +   G  P++VT N +LK  C  G +G A +L   +
Sbjct: 212 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM 271

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P   T++TL++A+ +   +++A  +   M      PDL  Y++L  GL +AG++
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 331

Query: 300 KEG----NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            E     +E+   ++   +  DVV +++++DA         A+   + M + G   ++++
Sbjct: 332 DEAFKLKDEMEHLSI---VSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVT 388

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           ++I++KGLC++G+L EA G    +    L P ++TY++LID +CK+  +   F L D M+
Sbjct: 389 HNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMV 448

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + GLK D    + L+  L       +A        +   +P+   + T+M    +  +  
Sbjct: 449 RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPE 508

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + L+  M    + P + T+  LI+G+ + G L+ AI    +++K+GL PD  TY+ II
Sbjct: 509 PALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIII 568

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           H   K  ++         M  N   PD+   N L+N L     L+ A+KLF    ++G +
Sbjct: 569 HAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKK 628

Query: 591 PDIITYNTIICGYC 604
            D+ITYNT+I   C
Sbjct: 629 VDVITYNTLIQALC 642



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 206/459 (44%), Gaps = 39/459 (8%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVD 159
           R+ ++ +      Y+ L+  Y R+G I ++  +   M+  G    PDL     L + L  
Sbjct: 270 RMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFG--FEPDLWTYNVLAAGLCQ 327

Query: 160 SNSVGQYYKLCRAMR-----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           +  V + +KL   M            Y  L++   +     +A ++  ++  +G   ++V
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++K LC  GQ+  A     ++   G  P+V+T++TLI+A+CK   + KAF L + M
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +   L  D    + L+  L K  R +E  ELL +   RG   D V + +VM AY      
Sbjct: 448 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKP 507

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A+  +D M      P++ +Y+ LIKGLC  G+L EA     +++ + L P   TY+ +
Sbjct: 508 EPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNII 567

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           I  +CK G L   F  ++ M++   KPD V C                            
Sbjct: 568 IHAYCKEGDLEKAFQFHNKMLENYFKPDVVTC---------------------------- 599

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
             NTLM+G C   +    +KLF        K DVIT+  LI+ +   G + +A+  F  M
Sbjct: 600 --NTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADM 657

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
             RGL PD  TY+ ++  L +        +M   ++ +G
Sbjct: 658 EARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 201/435 (46%), Gaps = 24/435 (5%)

Query: 206 QRGFV-PNIVTCNKILKRLCINGQIGNASSL--FDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +RG V P++   N +L  L  +      +SL  F  L+ +   PN  TF+ L++  C + 
Sbjct: 165 RRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKG 224

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L  A    + M    L PD++ Y+ L+    + G L E   LL      G+      ++
Sbjct: 225 TLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYN 284

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV-LI 381
           +++ AY  +G + +A    + M   GF P++ +Y++L  GLCQ G++ EA  L  ++  +
Sbjct: 285 TLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHL 344

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
             + P ++TY++L+D   K  +  D  +L + M  +G+K   V  ++++ GL     + +
Sbjct: 345 SIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEE 404

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG---MYNIKPDVITHTV 493
           AL          L P++  +NTL+D  C   +A +  K F+LM       +K D  T   
Sbjct: 405 ALGRLKMMTEEGLAPDVITYNTLIDAYC---KARNVAKAFVLMDEMVRSGLKMDTFTLNT 461

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L+  +  +     A  L     +RG  PD ++Y  ++   FK       L+++  M +  
Sbjct: 462 LLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRK 521

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC--------- 604
           + P I  YN L+  L     L  A+    +L  +GL PD  TYN II  YC         
Sbjct: 522 LTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAF 581

Query: 605 SLNSCLIDGYFKSQI 619
             ++ +++ YFK  +
Sbjct: 582 QFHNKMLENYFKPDV 596



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 169/365 (46%), Gaps = 40/365 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y +   + ++  +   M   G+ +    +  L+  L       +  +L R+  
Sbjct: 424 YNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPP 483

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y  +M    ++   E A ++  ++ +R   P+I T N ++K LC  G++ 
Sbjct: 484 QRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLT 543

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A    + L+  G  P+  T++ +I+A+CKE  LEKAFQ +N M+E    PD++  + L+
Sbjct: 544 EAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLM 603

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL   G+L++  +L  +  ++G K+DV+ +++++ A    GDV  A+  +  M   G  
Sbjct: 604 NGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQ 663

Query: 351 PNVISYSILIKGLCQQGRLVEACGL-------------FGQVLIRRLEPSLLT------- 390
           P+  +Y++++  L + GR  EA  +             F   LI+     + T       
Sbjct: 664 PDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVK 723

Query: 391 ----------------YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
                           Y+  +   C  G+L++  ++ D M+++G+  D+     L+ GL+
Sbjct: 724 SDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLI 783

Query: 435 GDALR 439
               R
Sbjct: 784 KRQKR 788


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 220/443 (49%), Gaps = 9/443 (2%)

Query: 171 RAMRGKGFCVYEFLMNGL----LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             MR  GF +  +  NGL    L+ G  + A  ++R+++  G  P++ T + ++      
Sbjct: 183 EKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKR 242

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
             I     L + +  +G +PN+ T++  I    ++ K+++A+++   M +    PD++ Y
Sbjct: 243 RNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTY 302

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++LID L  A +L +   L         K D V + +++D +   G + +  + +  M  
Sbjct: 303 TVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEA 362

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G+ P+V++++IL+  LC+ GR+ EA  L   +  + + P+L TY++LI G  ++ +L D
Sbjct: 363 DGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDD 422

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              L+ NM   G++P A    LLI+     G  G AL  F +     + PN+   N  + 
Sbjct: 423 ALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLY 482

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
               + R  +   +F  +    + PD +T+ ++++  +  G +  AI L  +M K    P
Sbjct: 483 SLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP 542

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           DVI  +++I  L+K   +     MF  ME   +AP +  YN+LL  L KE  +  A++LF
Sbjct: 543 DVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF 602

Query: 582 GQLTDRGLEPDIITYNTIICGYC 604
             +   G  P+ IT+NT++   C
Sbjct: 603 ESMNGHGCSPNTITFNTLLDCLC 625



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 249/555 (44%), Gaps = 84/555 (15%)

Query: 70  LIHVLLQSDMRDVASHVFDKMV---------------IQFGKTYNFFRLF-----RDSLG 109
           LIH LLQS     A  V+ +MV               +  GK  N   +       +S+G
Sbjct: 200 LIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMG 259

Query: 110 DFGCDYSFLIENYV--RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
                Y++ I   V  R GKIDE+  I   M D G    PD+V    + L+D+       
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGC--GPDVVT--YTVLIDA------- 308

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            LC A +                   +++A  +  ++      P+ VT   +L +    G
Sbjct: 309 -LCTARK-------------------LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCG 348

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            +     ++  +   G  P+VVTF+ L+NA CK  ++ +AF L + M +  ++P+L  Y+
Sbjct: 349 HLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYN 408

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL +A RL +  +L       G++     +  ++D +   G  G+A++T+++M   
Sbjct: 409 TLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKAR 468

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PN+++ +  +  L + GRL EA  +F ++    L P  +TY+ ++  + K G++ + 
Sbjct: 469 GIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEA 528

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             L   M K   +PD +V                               N+L+D   +  
Sbjct: 529 IKLLSEMSKVQCEPDVIV------------------------------INSLIDTLYKAG 558

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  +  ++F  M   N+ P V+T+ +L+ G+  +G +  A+ LF  M   G +P+ IT++
Sbjct: 559 RVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFN 618

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++  L K   + + L MF  M      PD+  +N +++  IK+  +  A+ LF Q+  +
Sbjct: 619 TLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-K 677

Query: 588 GLEPDIITYNTIICG 602
            L PD +T  T++ G
Sbjct: 678 LLRPDHVTLCTLLPG 692



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 246/501 (49%), Gaps = 20/501 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L+    + G+I+E+ ++   M   G+  +      L+S L+ +N +     L   M 
Sbjct: 372 FTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNME 431

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++   + G    A     ++  RG  PNIV CN  L  L   G++G
Sbjct: 432 SLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLG 491

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A ++F+ L   G  P+ VT++ ++  + K  ++++A +L + M ++   PD+I+ + LI
Sbjct: 492 EAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLI 551

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L+KAGR++E  ++     +  L   VV ++ ++      G + +AVQ ++ M   G  
Sbjct: 552 DTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCS 611

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN I+++ L+  LC+   +  A  +F ++      P +LT++++I GF K  ++++   L
Sbjct: 612 PNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWL 671

Query: 411 YDNMIKRGLKPDAV-VCSLLI----NGLMGDALRF---FFQSVRMTLIPNLFIFNTLMDG 462
           +  M K+ L+PD V +C+LL     +G + DA R    FF  V   +  +   +  +M G
Sbjct: 672 FHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNI--DRSFWEDVMGG 728

Query: 463 CCRLKRATDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GL 519
               +  T+   LF   L+     K D +    +I+ +      S A  +F +  K  G+
Sbjct: 729 IL-TEAGTEKAILFGERLVCRAICKDDSVL-IPIIKVLCKHKKTSVARNVFVKFTKELGV 786

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P +  Y+ +I G  +  N+ V  ++F+ M+  G APD   YN L++   K   ++    
Sbjct: 787 KPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFD 846

Query: 580 LFGQLTDRGLEPDIITYNTII 600
           L+ ++  RG +P+ ITYN +I
Sbjct: 847 LYDEMLTRGCKPNTITYNMVI 867



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 146/603 (24%), Positives = 273/603 (45%), Gaps = 88/603 (14%)

Query: 44   KTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRL 103
            K+ +P  A++ F+       +PNI     V   + +  +A       + + G+    F  
Sbjct: 451  KSGHPGKALETFEKMKARGIAPNI-----VACNASLYSLAE------MGRLGEAKAMFNE 499

Query: 104  FRDS-LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDS 160
             + S L      Y+ +++ Y ++G++DE++++ + MS   +   PD++    L+  L  +
Sbjct: 500  LKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSK--VQCEPDVIVINSLIDTLYKA 557

Query: 161  NSVGQYYKL-CRAMR---GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
              V + +++ CR            Y  L+ GL ++G I+ A  +   +   G  PN +T 
Sbjct: 558  GRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITF 617

Query: 217  NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
            N +L  LC N ++  A  +F  +  +  +P+V+TF+T+I+ F K+ +++ A  L++ M +
Sbjct: 618  NTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKK 677

Query: 277  MDLVPDLIIYSILIDGLFKAGRLKEGNEL-------LLTALDRGLKLDV---VVFSSVMD 326
            + L PD +    L+ G+ K+G++++   +       + + +DR    DV   ++  +  +
Sbjct: 678  L-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTE 736

Query: 327  AYVGIGD--VGRAVQTYDRML-------------------------NGGFLPNVISYSIL 359
              +  G+  V RA+   D +L                           G  P +  Y++L
Sbjct: 737  KAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLL 796

Query: 360  IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
            I G  +   +  A  LF ++      P   TY+SLID   KSGK+ + F LYD M+ RG 
Sbjct: 797  IDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGC 856

Query: 420  KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
            KP+ +  +++I+ L+                              RL +A D   L+  +
Sbjct: 857  KPNTITYNMVISNLVKSN---------------------------RLDKAMD---LYYNL 886

Query: 480  GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               +  P   T   LI G+   G L  A  +F  M+  G  P+   Y+ +++G  K  ++
Sbjct: 887  VSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHV 946

Query: 540  SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                  FK M + G+ PD+  Y +L+++L     +D AL  F +L   GL+PD++ YN +
Sbjct: 947  DTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLM 1006

Query: 600  ICG 602
            I G
Sbjct: 1007 ING 1009



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 134/562 (23%), Positives = 247/562 (43%), Gaps = 73/562 (12%)

Query: 100  FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
            F R+   +L      Y+ L+    + G+I ++V++F  M+  G   +      L+ CL  
Sbjct: 567  FCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCK 626

Query: 160  SNSVG----QYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
            ++ V      +YK+           +  +++G +++  I+NA  +  Q +++   P+ VT
Sbjct: 627  NDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQ-MKKLLRPDHVT 685

Query: 216  CNKILKRLCINGQIGNASSLFD---------------------VLLLVGPKPNVV----- 249
               +L  +  +GQI +A  + +                     +L   G +  ++     
Sbjct: 686  LCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERL 745

Query: 250  ----------TFSTLINAFCKEAKLEKAFQLY-NLMMEMDLVPDLIIYSILIDGLFKAGR 298
                          +I   CK  K   A  ++     E+ + P L +Y++LIDG  +   
Sbjct: 746  VCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHN 805

Query: 299  LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            ++    L       G   D   ++S++DA+   G +      YD ML  G  PN I+Y++
Sbjct: 806  VEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNM 865

Query: 359  LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            +I  L +  RL +A  L+  ++     P+  T+  LIDG  KSG+L D   ++D M+  G
Sbjct: 866  VISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYG 925

Query: 419  LKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
             +P                              N  I+N L++G  +L       + F  
Sbjct: 926  CRP------------------------------NSAIYNILVNGYGKLGHVDTACEFFKR 955

Query: 479  MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
            M    I+PD+ ++T+L+  +   G +  A+  F ++ + GL PD++ Y+ +I+GL + + 
Sbjct: 956  MVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQR 1015

Query: 539  ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
                L +F  M+  G+ PD+  YN L+  L     ++ A K++ +L   GL+P++ TYN 
Sbjct: 1016 TEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNA 1075

Query: 599  IICGYC-SLNSCLIDGYFKSQI 619
            +I GY  S NS L  G +K  +
Sbjct: 1076 LIRGYTLSGNSELAYGIYKKMM 1097



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/547 (24%), Positives = 250/547 (45%), Gaps = 32/547 (5%)

Query: 36   NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
            N +LA L K      A+Q F+  +    SPN      L+  L ++D  D+A  +F KM  
Sbjct: 583  NILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTT 642

Query: 93   QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ- 151
               +         D L      ++ +I  +++  +I  ++ +F  M  +   L PD V  
Sbjct: 643  MNCRP--------DVL-----TFNTIIHGFIKQNQIKNAIWLFHQMKKL---LRPDHVTL 686

Query: 152  -RLMSCLVDSNSVGQYYKLCRAM-----RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVI 205
              L+  ++ S  +   +++                +E +M G+L +   E A     +++
Sbjct: 687  CTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLV 746

Query: 206  QRGFVPNIVTCNKILKRLCINGQIGNASSLF-DVLLLVGPKPNVVTFSTLINAFCKEAKL 264
             R    +      I+K LC + +   A ++F      +G KP +  ++ LI+ F +   +
Sbjct: 747  CRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNV 806

Query: 265  EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
            E A+ L+  M      PD   Y+ LID   K+G++ E  +L    L RG K + + ++ V
Sbjct: 807  EVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMV 866

Query: 325  MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
            +   V    + +A+  Y  +++G F P   ++  LI GL + GRL +A  +F  ++    
Sbjct: 867  ISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGC 926

Query: 385  EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALR 439
             P+   Y+ L++G+ K G +      +  M+K G++PD    ++L++     G + DAL 
Sbjct: 927  RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALH 986

Query: 440  FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            +F +  +  L P+L  +N +++G  R +R  + + LF  M    I PD+ T+  LI  + 
Sbjct: 987  YFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLG 1046

Query: 500  SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
              G +  A  ++ ++   GL P+V TY+A+I G     N  +   ++K M   G  P+  
Sbjct: 1047 IVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTG 1106

Query: 560  IYNVLLN 566
             +  L N
Sbjct: 1107 TFAQLPN 1113



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 209/474 (44%), Gaps = 55/474 (11%)

Query: 182 EFLMNGLLRKGV-----------IENAFHMHRQVIQRGFVPNIV----TCNKILKRLCIN 226
           E ++NG  RKG            I +  H        G +PN+V    TCN +L+ L ++
Sbjct: 78  ELVVNGKPRKGSSSDEVLGVLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVH 137

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            ++ + + +FD++     + NV T+  +  +      L +A      M E   V +   Y
Sbjct: 138 RRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSY 197

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LI  L ++G  KE  E+    +  GLK  +  FS++M A     ++   +   + M +
Sbjct: 198 NGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMES 257

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PN+ +Y+I I+ L + G++ EA  +  ++      P ++TY+ LID  C + KL D
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317

Query: 407 GFSLYDNMIKR-----------------------------------GLKPDAVVCSLLIN 431
              L+  M                                      G  PD V  ++L+N
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVN 377

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
            L     + +A        +  ++PNL  +NTL+ G  R  R  D + LF  M    ++P
Sbjct: 378 ALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEP 437

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
              T+ +LI      G    A+  F +M  RG+ P+++  +A ++ L +   +     MF
Sbjct: 438 TAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMF 497

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             ++ +G+APD   YN+++    K   +D A+KL  +++    EPD+I  N++I
Sbjct: 498 NELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLI 551



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 30/276 (10%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G + +A    ++M   GF+ N  SY+ LI  L Q G   EA  ++ +++   L+PSL T+
Sbjct: 173 GGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTF 232

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIP 451
           S+L+     SGK R+                       I  +MG       +   M L P
Sbjct: 233 SALM---VASGKRRN-----------------------IKTVMG----LLEEMESMGLRP 262

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N++ +   +    R  +  +  ++   M      PDV+T+TVLI  + +   L  A+ LF
Sbjct: 263 NIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLF 322

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M      PD +TY  ++       ++     ++  ME +G APD+  + +L+N L K 
Sbjct: 323 TKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKA 382

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             ++ A  L   +  +G+ P++ TYNT+I G    N
Sbjct: 383 GRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRAN 418


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 178/650 (27%), Positives = 293/650 (45%), Gaps = 77/650 (11%)

Query: 12  WR---SINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTH------NCV 62
           WR   S N    S + TH+S L FN  N          +P  A+ FFKW H      + V
Sbjct: 54  WRKNPSFNTLIPSLTPTHLSSL-FNNPNL---------HPLTALNFFKWIHYQHGFIHTV 103

Query: 63  SSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNF-FRLFRDSLGDFG---CDYSFL 118
            S     L+ +L+++     A +V + M+     ++   F L   +  +F      Y+ L
Sbjct: 104 HS--YQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNRL 161

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ----RLMSCLVDSNSVGQYYKLCRAMR 174
                R G IDE   +F  M + G+   P+L+         C + +  V + Y  C  M+
Sbjct: 162 FMVLSRFGLIDELNCLFKDMLNDGV--EPNLISFNTMVNAHCKIGNVVVAKAY-FCGLMK 218

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GFC     Y  L+ G  +   + +A+ +   + Q G + N V+   ++   C  G+I 
Sbjct: 219 F-GFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKID 277

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF  +   G  P+V T++ L+ AFC+  K  +A + +  M+E  + P++  Y++LI
Sbjct: 278 EALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLI 337

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D   K G++ EG E+L T L++GL   VV F++++D Y   G +  A+   D M      
Sbjct: 338 DYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVC 397

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN  +Y+ LI G C++  +  A  L  ++   +L P+L+TY++LI G CK+  +   + L
Sbjct: 398 PNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRL 457

Query: 411 YDNMIKRGLKPDA--------VVCSL---------------------------LINGL-- 433
           +  MIK G  PD          +C +                           LI+G   
Sbjct: 458 HHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCK 517

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
                DA   F + +     PN   FN L+DG  +  +  D + L  +MG ++ KP V T
Sbjct: 518 AEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHT 577

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +T+LI  I  +     A +   QM+  G  P+V+TY+A I    +   +     M   ++
Sbjct: 578 YTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIK 637

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             G+  D  IY+VL+N       LD+A  +  ++ D G EP   TY+ ++
Sbjct: 638 EEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILL 687



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 238/556 (42%), Gaps = 44/556 (7%)

Query: 91  VIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           + + G  Y  F +        GC      Y+ LI  +  +GKIDE++E+F  M + G + 
Sbjct: 238 IHELGDAYKVFEIMPQE----GCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFP 293

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMH 201
                  L++   +     +  K    M   G       Y  L++   + G ++    M 
Sbjct: 294 DVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEML 353

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
             ++++G V ++V  N ++   C  G + +A  + D + L    PN  T++ LI  FC++
Sbjct: 354 STMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRK 413

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
             +++A  L N M E  L P+L+ Y+ LI GL KA  +     L    +  G   D   F
Sbjct: 414 KSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTF 473

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
            + +D    +G V +A Q ++ +       N   Y+ LI G C+  +  +A  LF ++L 
Sbjct: 474 CAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLF 533

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD----- 436
               P+ +T++ L+DG  K GK+ D  SL D M K   KP     ++LI  ++ +     
Sbjct: 534 EGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDR 593

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A  F  Q +     PN+  +   +   CR  R  +  ++ + +    I  D   + VL+ 
Sbjct: 594 ANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVN 653

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAII-HGLFK------------GKNISVG- 542
                G L SA  +  +M   G  P   TYS ++ H +F+              NISV  
Sbjct: 654 AYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDN 713

Query: 543 ------------LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
                         +F+ M   G  P++  Y+ L+  L K  +L  A +LF  + + G+ 
Sbjct: 714 ANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGIS 773

Query: 591 PDIITYNTIICGYCSL 606
           P    +N+++   C L
Sbjct: 774 PSENIHNSLLSSCCKL 789



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 193/401 (48%), Gaps = 30/401 (7%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +    F  ++ + N++   L   G I   + LF  +L  G +PN+++F+T++NA CK   
Sbjct: 146 LTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGN 205

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +  A   +  +M+     D   Y+ LI G  K   L +  ++       G   + V +++
Sbjct: 206 VVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTN 265

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++  +  +G +  A++ + +M   G  P+V +Y++L+   C+ G+  EA   F +++   
Sbjct: 266 LIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENG 325

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQ 443
           +EP++ TY+ LID FCK GK+ +G  +   M+++GL                        
Sbjct: 326 IEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGL------------------------ 361

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                 + ++  FN L+DG C+     D + +   M +  + P+  T+  LI G   + S
Sbjct: 362 ------VSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKS 415

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A+ L  +M +  L+P+++TY+ +IHGL K + +     +  LM ++G  PD   +  
Sbjct: 416 MDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCA 475

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            ++ L K   ++ A ++F  L ++  E +   Y  +I GYC
Sbjct: 476 FIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYC 516



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 127/543 (23%), Positives = 235/543 (43%), Gaps = 84/543 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS------------CLVDSNS 162
           Y+ LI+ + ++GK+DE +E+ + M + G+  S      L+             C++DS  
Sbjct: 333 YTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMK 392

Query: 163 VGQYYKLCRAMRGK-----GFC-------------------------VYEFLMNGLLRKG 192
           +    K+C   R       GFC                          Y  L++GL +  
Sbjct: 393 LN---KVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKAR 449

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
           V+++A+ +H  +I+ GFVP+  T    +  LC  G++  A  +F+ L     + N   ++
Sbjct: 450 VVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYT 509

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
            LI+ +CK  K   A  L+  M+     P+ I +++L+DGL K G++++   L+      
Sbjct: 510 ALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKF 569

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
             K  V  ++ +++  +   D  RA    D+M++ G  PNV++Y+  IK  C+QGRL+EA
Sbjct: 570 DAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEA 629

Query: 373 CGLFGQVLIRRLEPSLL----TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
                +++++  E  +L     Y  L++ +   G+L   F +   M   G +P     S+
Sbjct: 630 ----EEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSI 685

Query: 429 LINGL---------MGDALR----------------------FFFQSVRMTLIPNLFIFN 457
           L+  L         MG  L                        F + V    +PN+  ++
Sbjct: 686 LLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYS 745

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            L+ G C+++  +   +LF  M    I P    H  L+      G    A+ L   M++ 
Sbjct: 746 KLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEY 805

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
                + +Y  ++ GLF+  N      +F+ +   G   D  ++ VLL+ L+++  +D  
Sbjct: 806 NHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDEC 865

Query: 578 LKL 580
            +L
Sbjct: 866 SQL 868



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 30/268 (11%)

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           +  MLN G  PN+IS++ ++   C+ G +V A   F  ++         TY+SLI G+CK
Sbjct: 178 FKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCK 237

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLM 460
             +L D + +++ M + G                   LR            N   +  L+
Sbjct: 238 IHELGDAYKVFEIMPQEG------------------CLR------------NEVSYTNLI 267

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
            G C + +  + ++LF  M      PDV T+TVL+      G  + A+  F +M++ G+ 
Sbjct: 268 HGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIE 327

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+V TY+ +I    K   +  G+ M   M   G+   +  +N L++   K   ++ A+ +
Sbjct: 328 PNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICV 387

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLNS 608
              +    + P+  TYN +ICG+C   S
Sbjct: 388 LDSMKLNKVCPNSRTYNELICGFCRKKS 415



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 145/387 (37%), Gaps = 67/387 (17%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y +  K  ++  +F  M   G + +      L+  L     V     L   M 
Sbjct: 508 YTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM- 566

Query: 175 GK-----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ- 228
           GK         Y  L+  +LR+   + A     Q+I  G  PN+VT    +K  C  G+ 
Sbjct: 567 GKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRL 626

Query: 229 -------------------------------IGNASSLFDVLLLV---GPKPNVVTFSTL 254
                                          IG   S F VL+ +   G +P+  T+S L
Sbjct: 627 LEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSIL 686

Query: 255 I-----NAFCKE---------------------AKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +       + KE                     A  E    L+  M+E   VP++  YS 
Sbjct: 687 LKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSK 746

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL K   L     L     + G+     + +S++ +   +G    A++  D M+   
Sbjct: 747 LIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYN 806

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            L ++ SY +L+ GL +QG   +A  +F  +L        + +  L+DG  + G + +  
Sbjct: 807 HLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECS 866

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG 435
            L D M K G +  +   ++L   L G
Sbjct: 867 QLRDIMEKTGCRLHSDTHTMLSQELNG 893


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 211/404 (52%), Gaps = 8/404 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCI--NGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
           +  Q+   G  PNI T + ++   C    G+IG A  LFD ++  G +P+VVT+ TLIN 
Sbjct: 83  LSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLING 142

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
            CK      A +L   M++ +  P++  Y+ +ID L K  ++ E   L    + +G+  D
Sbjct: 143 LCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPD 202

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           +  ++S++ A   + +        + M++   +P+V+S++ ++  LC++G++ EA  +  
Sbjct: 203 IFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVD 262

Query: 378 QVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
           +++ R    P++++Y++LI+G+CK  ++     L+  M ++ L PD V  S LI+GL   
Sbjct: 263 KMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 322

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + DA+  F + V  + IPNL  +  L+D  C+ +   + + L   +   N+ PD+  +
Sbjct: 323 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 382

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            + I G+   G L +A  LF  +  +GL PDV TYS +I+GL +   +     +F+ M+ 
Sbjct: 383 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 442

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           NG   +  IYN +    ++      A++L  ++  RG   D  T
Sbjct: 443 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 486



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 201/397 (50%), Gaps = 7/397 (1%)

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
           L +G I  A H+  ++I  GF P++VT   ++  LC  G    A  L   ++    +PNV
Sbjct: 109 LNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNV 168

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
             ++T+I++ CK+ ++ +AF L++ M+   + PD+  Y+ LI  L      K    LL  
Sbjct: 169 FAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNE 228

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQG 367
            +D  +  DVV F++V+DA    G V  A    D+M+  GG +PNVISY+ LI G C+  
Sbjct: 229 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQ 288

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           R+ +A  LFG++  + L P  +TYS+LI G C   +L+D  +L+  M+     P+ V   
Sbjct: 289 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 348

Query: 428 LLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +L+     N  + +A+          L P++ + N  +DG CR         LF  +   
Sbjct: 349 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 408

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            ++PDV T++++I G+  +G L  A  LF +M + G T +   Y+ I  G  +    S  
Sbjct: 409 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 468

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
           + + + M   G + D +   + + ML  +  LD +LK
Sbjct: 469 IQLLQEMVARGFSADASTMTLFVKMLSDD-GLDQSLK 504



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 200/387 (51%), Gaps = 14/387 (3%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD---LVPDLII 285
           I  A S F+ +L + P P+ V F+ L+ +    AK++    L +L  +MD   + P++  
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFGIPPNIYT 98

Query: 286 YSILIDGL--FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
             ILI+       G++ E   L    +  G + DVV + ++++    +G+   A++    
Sbjct: 99  LHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 158

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+     PNV +Y+ +I  LC+  ++ EA  LF +++ + + P + TY+SLI   C   +
Sbjct: 159 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 218

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV------RMTLIPNLFIFN 457
            +   +L + M+   + PD V  + +++ L  +        V      R   +PN+  +N
Sbjct: 219 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYN 278

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           TL++G C+++R    + LF  M    + PD +T++ LI G+     L  AI LF +M+  
Sbjct: 279 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 338

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
              P+++TY  ++  L K + ++  + + K +E + + PDI + N+ ++ + +   L+AA
Sbjct: 339 SQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAA 398

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
             LF  L+ +GL+PD+ TY+ +I G C
Sbjct: 399 RDLFSNLSSKGLQPDVWTYSIMINGLC 425



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 204/423 (48%), Gaps = 8/423 (1%)

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
           L    I+ A     ++++    P+ V  NK+L  +          SL   +   G  PN+
Sbjct: 37  LHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNI 96

Query: 249 VTFSTLINAFCK--EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
            T   LIN+FC     K+ +A  L++ M+     PD++ Y  LI+GL K G       LL
Sbjct: 97  YTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL 156

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
            + + +  + +V  +++++D+      V  A   +  M+  G  P++ +Y+ LI  LC  
Sbjct: 157 GSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 216

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG-LKPDAVV 425
                   L  +++  ++ P ++++++++D  CK GK+ +   + D MI+RG   P+ + 
Sbjct: 217 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVIS 276

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            + LING      +  A+  F +  R  LIP+   ++TL+ G C ++R  D + LF  M 
Sbjct: 277 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 336

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
             +  P+++T+ +L+  +     L+ A+ L   +    L PD+   +  I G+ +   + 
Sbjct: 337 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 396

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               +F  +   G+ PD+  Y++++N L +   LD A KLF ++ + G   +   YNTI 
Sbjct: 397 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 456

Query: 601 CGY 603
            G+
Sbjct: 457 RGF 459



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/472 (22%), Positives = 197/472 (41%), Gaps = 54/472 (11%)

Query: 21  SESKTHISDLQFNQANAILAN---LIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQS 77
           S ++ H   L FN  +  +++   +++   P   + F K   +     + + L+ +  Q 
Sbjct: 28  SHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQM 87

Query: 78  DMRDVASHVFDKMVI-------QFGKTYNFFRLFRDSLGD-FGCD---YSFLIENYVRIG 126
           D   +  +++   ++         GK      LF   +G+ F  D   Y  LI    ++G
Sbjct: 88  DSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVG 147

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
               ++ +   M       +      ++  L     V + + L   M  KG       Y 
Sbjct: 148 NTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYN 207

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            L++ L      ++   +  +++    +P++V+ N ++  LC  G++  A  + D ++  
Sbjct: 208 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 267

Query: 243 GP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           G   PNV++++TLIN +CK  +++KA  L+  M   +L+PD + YS LI GL    RL++
Sbjct: 268 GGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 327

Query: 302 GNEL----------------------------------LLTALD-RGLKLDVVVFSSVMD 326
              L                                  LL A++   L  D+ V +  +D
Sbjct: 328 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 387

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G++  A   +  + + G  P+V +YSI+I GLC++G L EA  LF ++       
Sbjct: 388 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 447

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL 438
           +   Y+++  GF ++ +      L   M+ RG   DA   +L +  L  D L
Sbjct: 448 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 499



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 8/110 (7%)

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
            ++  AI  F +ML+    P  + ++ ++  + K K+ S  L +   M+  G+ P+I   
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 562 NVLLNMLIKECNLD-----AALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           ++L+N     C+L+      AL LF ++   G  PD++TY T+I G C +
Sbjct: 100 HILINSF---CHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 146


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 206/404 (50%), Gaps = 9/404 (2%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +++ G  P ++T N ++  LC+ G++  A++L + ++  G   +VVT+ T++N  CK   
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
            + A  L + M E  + PD++IYS +ID L K G   +   L    L++G+  +V  ++ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D +   G    A +    M+     P+V++++ LI    ++G+L EA  L  ++L R 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDAL 438
           + P  +TY+S+I GFCK  +  D   ++D M      PD V  + +I+       + + +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           +   +  R  L+ N   +NTL+ G C +        LF  M  + + PD IT  +L+ G 
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                L  A+ LF  +    +  D + Y+ IIHG+ KG  +     +F  +  +GV PD+
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             YNV+++    +  +  A  LF ++ D G EPD  TYNT+I G
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 400



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 195/371 (52%), Gaps = 9/371 (2%)

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           ++ +G  P V+TF+TLIN  C E ++ +A  L N M+   L  D++ Y  +++G+ K G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            K    LL    +  +K DVV++S+++D     G    A   +  ML  G  PNV +Y+ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +I G C  GR  +A  L   ++ R + P +LT+++LI    K GKL +   L D M+ R 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           + PD V  + +I G        DA   F     +   P++  FNT++D  CR KR  + +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +L   +    +  +  T+  LI G     +L++A  LF +M+  G+ PD IT + +++G 
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            + + +   L +F++++ + +  D   YN++++ + K   +D A  LF  L   G+EPD+
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 594 ITYNTIICGYC 604
            TYN +I G+C
Sbjct: 357 QTYNVMISGFC 367



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 210/421 (49%), Gaps = 9/421 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL  +G +  A  +  +++ +G   ++VT   I+  +C  G   +A +L   +
Sbjct: 12  TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 71

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                KP+VV +S +I+  CK+     A  L++ M+E  + P++  Y+ +IDG    GR 
Sbjct: 72  EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 131

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   LL   ++R +  DV+ F++++ A V  G +  A +  D ML+    P+ ++Y+ +
Sbjct: 132 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 191

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+  R  +A  +F  +      P ++T++++ID +C++ ++ +G  L   + +RGL
Sbjct: 192 IYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 247

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             +    + LI+G      +  A   F + +   + P+    N L+ G C  ++  + ++
Sbjct: 248 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 307

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF ++ M  I  D + + ++I G+     +  A  LF  +   G+ PDV TY+ +I G  
Sbjct: 308 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 367

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               IS    +F  M+ NG  PD + YN L+   +K   +D +++L  ++   G   D  
Sbjct: 368 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 427

Query: 595 T 595
           T
Sbjct: 428 T 428



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 203/399 (50%), Gaps = 15/399 (3%)

Query: 169 LCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           L   M GKG  +    Y  ++NG+ + G  ++A ++  ++ +    P++V  + I+ RLC
Sbjct: 32  LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 91

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
            +G   +A  LF  +L  G  PNV T++ +I+ FC   +   A +L   M+E ++ PD++
Sbjct: 92  KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 151

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            ++ LI    K G+L E  +L    L R +  D V ++S++  +        A   +D M
Sbjct: 152 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 211

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
            +    P+V++++ +I   C+  R+ E   L  ++  R L  +  TY++LI GFC+   L
Sbjct: 212 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 267

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP-NLFIFNT 458
                L+  MI  G+ PD + C++L+ G      + +AL  F + ++M+ I  +   +N 
Sbjct: 268 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNI 326

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C+  +  +   LF  + ++ ++PDV T+ V+I G   + ++S A +LF +M   G
Sbjct: 327 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 386

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
             PD  TY+ +I G  K   I   + +   M  NG + D
Sbjct: 387 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 425



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 148/270 (54%), Gaps = 9/270 (3%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+  G  P VI+++ LI GLC +GR++EA  L  +++ + L   ++TY ++++G CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNT 458
            +   +L   M +  +KPD V+ S +I+     G   DA   F + +   + PN+F +N 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++DG C   R +D  +L   M    I PDV+T   LI     +G L  A  L  +ML R 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           + PD +TY+++I+G  K        HMF LM     +PD+  +N ++++  +   +D  +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +L  +++ RGL  +  TYNT+I G+C +++
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDN 266



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/313 (19%), Positives = 132/313 (42%), Gaps = 51/313 (16%)

Query: 59  HNCVSSPNIA--QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS 116
           H C+    +    +I+   + +  D A H+FD M      T+N                 
Sbjct: 178 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT---------------- 221

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
            +I+ Y R  ++DE +++   +S  G+                +N+              
Sbjct: 222 -IIDVYCRAKRVDEGMQLLREISRRGLV---------------ANTT------------- 252

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
               Y  L++G      +  A  + +++I  G  P+ +TCN +L   C N ++  A  LF
Sbjct: 253 ---TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 309

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           +V+ +     + V ++ +I+  CK +K+++A+ L+  +    + PD+  Y+++I G    
Sbjct: 310 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 369

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
             + + N L     D G + D   +++++   +  G++ ++++    M + GF  +  + 
Sbjct: 370 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 429

Query: 357 SILIKGLCQQGRL 369
             ++  L   GRL
Sbjct: 430 K-MVADLITDGRL 441


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 232/466 (49%), Gaps = 11/466 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYE-----FLMNGLLRKGVIENAFHMHRQVIQR 207
           L     D+   G+  +    M  KGF + E     +L+  L R G +++     R+++  
Sbjct: 161 LFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLL-ALRRGGQVDSCLRFFRRMVNL 219

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
                + +   +L  LC  G +     L D +   G K NVVT++  I  + K   L   
Sbjct: 220 DVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGV 279

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            ++  LM +  +  +++ Y++LI G    G+++E   L     ++G++ DV V++S++  
Sbjct: 280 AEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISC 339

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G+V RA+  +D M + G +P+  +Y  LI G+C+ G++  A  L  ++  + ++ +
Sbjct: 340 NCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLN 399

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
            + +++LIDG+C+SG + +   L   M K+GL+ D    + + +GL       +A    F
Sbjct: 400 PVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLF 459

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             V   + PN   F TL+D  C+     +  ++F  M      P++IT+ VLI G + +G
Sbjct: 460 SMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 519

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++  A  L  ++  RGL PDV T +++IHG      + + L +F  M + G+ P++  Y 
Sbjct: 520 NMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYT 579

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            +++ L K+   + A KL+ ++ + GL PD   Y++++    S  S
Sbjct: 580 AMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAES 625



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 211/428 (49%), Gaps = 17/428 (3%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----C 179
           R G++D  +  F  M ++ + ++   +  ++  L     V    KL   +  KG      
Sbjct: 202 RGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVV 261

Query: 180 VYEFLMNGLLRK----GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
            Y   + G  ++    GV E    M ++    G   N+VT   ++      G+I  A  L
Sbjct: 262 TYNAFIEGYFKRLDLGGVAEILTLMEKE----GVACNVVTYTLLIHGFSNIGKIEEAQRL 317

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F+ +   G + +V  ++++I+  C+   +++A  L++ M +  L+P    Y  LI G+ K
Sbjct: 318 FEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCK 377

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           AG+++    L+     +G+ L+ V+F++++D Y   G V  A++    M   G   +V +
Sbjct: 378 AGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFA 437

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ +  GLC+  R  EA GL   ++ R + P+ +++++LID +CK G   +   ++  M 
Sbjct: 438 YNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREME 497

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           ++G  P+ +  ++LI+G      M +A +   +     LIP+++   +L+ G C   +  
Sbjct: 498 EKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVD 557

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             +KLF  M    + P+V+T+T +I G++  G    A  L+ +M + GLTPD   YS+++
Sbjct: 558 MALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617

Query: 531 HGLFKGKN 538
             L   ++
Sbjct: 618 GSLHSAES 625



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 172/351 (49%), Gaps = 36/351 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  +  IGKI+E+  +F  M + GI     +   ++SC             CR+  
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN------------CRS-- 343

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                            G ++ A  +  ++  +G +P+  T   ++  +C  GQ+  A  
Sbjct: 344 -----------------GNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQM 386

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G   N V F+TLI+ +C+   +++A +L  +M +  L  D+  Y+ +  GL 
Sbjct: 387 LVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLC 446

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  R  E   LL + ++RG+  + + F++++D Y   G+   A + +  M   G +PN+I
Sbjct: 447 KLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNII 506

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y++LI G  ++G + EA  L  ++  R L P + T +SLI G C  GK+     L+D M
Sbjct: 507 TYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEM 566

Query: 415 IKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLM 460
            +RGL P+ V  + +I+GL  D     A + + +     L P+  ++++L+
Sbjct: 567 PQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 160/365 (43%), Gaps = 38/365 (10%)

Query: 281 PDLIIYSILI---------DGLFKAGRLKEGNELL-LTALDRGLKLDVVVFSSVMD---- 326
           PDL  Y  LI         D L K+ +  E   L    A+D GL++ V V +S++D    
Sbjct: 85  PDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACN 144

Query: 327 -------------------AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
                               Y      G A++ ++ M   GF  +  S  + +  L + G
Sbjct: 145 ESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGG 204

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           ++      F +++   +E ++ + + ++DG CK G +  G  L D +  +G+K + V  +
Sbjct: 205 QVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYN 264

Query: 428 LLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
             I G      +G          +  +  N+  +  L+ G   + +  +  +LF  M   
Sbjct: 265 AFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 324

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            I+ DV  +T +I      G++  A++LF +M  +GL P   TY A+IHG+ K   +   
Sbjct: 325 GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 384

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +   M+  G+  +  I+N L++   +   +D AL+L   +  +GLE D+  YN+I  G
Sbjct: 385 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASG 444

Query: 603 YCSLN 607
            C LN
Sbjct: 445 LCKLN 449



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 4/186 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +     ++ + DE+  +   M + G+  +      L+       +  +  ++ R M 
Sbjct: 438 YNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREME 497

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++G  ++G ++ A  +  ++  RG +P++ TC  ++   CI+G++ 
Sbjct: 498 EKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVD 557

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LFD +   G  PNVVT++ +I+   K+ + E+AF+LY+ M E  L PD  +YS L+
Sbjct: 558 MALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617

Query: 291 DGLFKA 296
             L  A
Sbjct: 618 GSLHSA 623


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 222/442 (50%), Gaps = 6/442 (1%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           GF V++ L + L+  G++E A     ++ +   +P   +CN  L RL   G+   +   F
Sbjct: 61  GFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFF 120

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             ++  G  P V T++ +I   CKE  +  A  L+  M +M L PD++ Y+ LIDG  K 
Sbjct: 121 RDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKI 180

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G L E   L       G + DV+ ++++++++     + RA + +  M +    PNVISY
Sbjct: 181 GLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISY 240

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           S LI  LC++G +  A   F  +    L P+  TYSSLID  CK+G L + F L D M++
Sbjct: 241 STLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQ 300

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             +  + V  + L++GL     M +A   F    +  + PNL  +  L+ G  +++    
Sbjct: 301 EHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDK 360

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++LF  M   +IKPD++    ++ G+ S+  L    ++  +M + G+  + + Y+ ++ 
Sbjct: 361 AMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMD 420

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             FK  N +  +++ + M   G    +  +  L++ L K   +  A+  FG++ D  L+P
Sbjct: 421 AYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQP 480

Query: 592 DIITYNTIICGYCSLNSCLIDG 613
           ++  Y  +I G C  N+C+ D 
Sbjct: 481 NVAVYTALIDGLCK-NNCIGDA 501



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 221/441 (50%), Gaps = 9/441 (2%)

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           R M G G       Y  ++  + ++G +  A  +  Q+ + G  P+IVT N ++      
Sbjct: 121 RDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKI 180

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  +  LF+ +  +G +P+V+T++ LIN+FCK   + +AF+ +  M + DL P++I Y
Sbjct: 181 GLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISY 240

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           S LID L K G ++   +  +     GL  +   +SS++DA    G++G A    D ML 
Sbjct: 241 STLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQ 300

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
                N+++Y+ L+ GLC++G + EA  LF  +    + P+L  Y++LI G  K   +  
Sbjct: 301 EHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDK 360

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDA----LRFFFQSVRMTLI-PNLFIFNTLMD 461
              L++ M ++ +KPD ++   ++ GL  ++     +     ++ + I  N  I+ TLMD
Sbjct: 361 AMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMD 420

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
              +    T+ + L   M     +  V+T   LI G+  +G +  AI  F +M    L P
Sbjct: 421 AYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQP 480

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           +V  Y+A+I GL K   I     +F  M+   + PD   Y  +++  +K  N   AL + 
Sbjct: 481 NVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMR 540

Query: 582 GQLTDRGLEPDIITYNTIICG 602
            ++ + G+E D+  Y +++ G
Sbjct: 541 NKMMEMGIELDLYAYTSLVWG 561



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 148/618 (23%), Positives = 283/618 (45%), Gaps = 44/618 (7%)

Query: 12  WRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFK--WTHNCVSSPNIA- 68
           +R   + YC           +  AN IL  L+ ++   P    F+  WT   V  P    
Sbjct: 5   FRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGV 64

Query: 69  --QLIHVLLQSDMRDVASHVFDKM----VIQFGKTYNFF--RLFRDSLGDFGCD------ 114
              L  VL++  M + A   F +M    V+   ++ N F  RL +   GD   D      
Sbjct: 65  FDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMV 124

Query: 115 ----------YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSV 163
                     Y+ +I +  + G +  +  +F  M  MG  L+PD+V    + L+D    +
Sbjct: 125 GAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMG--LTPDIVT--YNTLIDGYGKI 180

Query: 164 G---QYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
           G   +   L   M+  G       Y  L+N   +   +  AF   R++  +   PN+++ 
Sbjct: 181 GLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISY 240

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           + ++  LC  G +  A   F  +  VG  PN  T+S+LI+A CK   L +AF L + M++
Sbjct: 241 STLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQ 300

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             +  +++ Y+ L+DGL + G + E  EL       G+  ++  +++++  ++ +  + +
Sbjct: 301 EHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDK 360

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A++ ++ M      P+++ +  ++ GLC + +L E   +  ++    +  + + Y++L+D
Sbjct: 361 AMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMD 420

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
            + K+G   +  +L + M   G +   V    LI+GL     + +A+ +F +     L P
Sbjct: 421 AYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQP 480

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+ ++  L+DG C+     D  KLF  M   N+ PD I +T +I G    G+   A+ + 
Sbjct: 481 NVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMR 540

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M++ G+  D+  Y++++ GL +   +         M   G+ PD  +   LL    + 
Sbjct: 541 NKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYEL 600

Query: 572 CNLDAALKLFGQLTDRGL 589
            N+D A++L  +L ++GL
Sbjct: 601 GNIDEAIELQNELVEKGL 618



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 197/408 (48%), Gaps = 18/408 (4%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPK--PNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           N ILK L ++  +   S +F++L        P    F  L +   +   LE A Q +  M
Sbjct: 29  NNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRM 88

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            +  ++P     +  +  L KAG      +     +  G+   V  ++ ++      GD+
Sbjct: 89  TKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDM 148

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A   +++M   G  P++++Y+ LI G  + G L E+  LF ++     EP ++TY++L
Sbjct: 149 LTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNAL 208

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTL 449
           I+ FCK   +   F  +  M  + LKP+ +  S LI+     G+M  A++FF    R+ L
Sbjct: 209 INSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGL 268

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
           +PN F +++L+D  C+     +   L   M   ++  +++T+T L+ G+  +G ++ A  
Sbjct: 269 LPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEE 328

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF  M K G+TP++  Y+A+IHG  K +++   + +F  M    + PDI ++  ++  L 
Sbjct: 329 LFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLC 388

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
            E  L+    +  ++ + G+  + + Y T           L+D YFK+
Sbjct: 389 SESKLEECKIIMTEMKESGIGANPVIYTT-----------LMDAYFKA 425



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 111/231 (48%), Gaps = 10/231 (4%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG-------FC 179
           K++E   I   M + GI  +P +   LM     + +  +   L   MR  G       FC
Sbjct: 392 KLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFC 451

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
               L++GL ++G+++ A +   ++      PN+     ++  LC N  IG+A  LFD +
Sbjct: 452 A---LIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEM 508

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P+ + ++ +I+   K    ++A  + N MMEM +  DL  Y+ L+ GL + G++
Sbjct: 509 QDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQV 568

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           ++  + L   + +G+  D  + + ++  +  +G++  A++  + ++  G +
Sbjct: 569 QQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 212/406 (52%), Gaps = 7/406 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           + +Q+  +G   N+VT + ++   C  GQ+  + SL   +L +G  PN +T++TL+   C
Sbjct: 32  LSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLC 91

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            + +++K    ++ ++      + + Y  L++GL K G  +   +LL    DR  + +VV
Sbjct: 92  LKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVV 151

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           ++S+++D       V  A   Y  M      PNVI+Y+ LI   C  G+L+ A  L  ++
Sbjct: 152 MYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEM 211

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
           +++ + P + T+S LID  CK GK  +   ++  M++ G+ P+    +++INGL     +
Sbjct: 212 ILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 269

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A+    + +   ++P+   +N+L+DG C+  R T  + L   M       DV+T+T L
Sbjct: 270 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 329

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           +  +    +L  A  LF +M +RG+ P + TY+A+I GL KG  +     +F+ +   G 
Sbjct: 330 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGC 389

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             D+  Y V+++ L KE   D AL +  ++ D G  P+ +T+  II
Sbjct: 390 CIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIII 435



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 198/410 (48%), Gaps = 32/410 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  LM GL  KG ++   H H +V+ + F  N V+   +L  LC  G+   A  L  ++
Sbjct: 82  TWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMI 141

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                +PNVV +S +I+  CK+  + +A+ LY+ M   ++ P++I Y+ LI     AG+L
Sbjct: 142 EDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQL 201

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                LL   + + +  DV  FS ++DA    G    A Q +  M+  G  PNV SY+I+
Sbjct: 202 MGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIM 259

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+  R+ EA  L  ++L + + P  +TY+SLIDG CKSG++    +L + M  RG 
Sbjct: 260 INGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQ 319

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             D V                               + +L+D  C+ +       LFM M
Sbjct: 320 PADVVT------------------------------YTSLLDALCKNQNLDKATALFMKM 349

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               I+P + T+T LI G+   G L +A  LF  +L +G   DV TY+ +I GL K    
Sbjct: 350 KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMF 409

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
              L +   ME NG  P+   + +++  L ++   D A KL  ++  +GL
Sbjct: 410 DEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 206/396 (52%), Gaps = 3/396 (0%)

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           I+  NKIL  L          SL   + + G + N+VT S LIN FC   ++  +F L  
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            ++++   P+ I ++ L+ GL   G +K+        + +  + + V + ++++     G
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           +   A++    + +    PNV+ YS +I GLC+   + EA  L+ ++  R + P+++TY+
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD---ALRFFFQSVRMTL 449
           +LI  FC +G+L   FSL   MI + + PD    S+LI+ L  +   A + F   V+M +
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGV 249

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            PN++ +N +++G C+ KR  + + L   M   N+ PD +T+  LI G+   G ++SA+ 
Sbjct: 250 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 309

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           L  +M  RG   DV+TY++++  L K +N+     +F  M+  G+ P +  Y  L++ L 
Sbjct: 310 LMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLC 369

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           K   L  A +LF  L  +G   D+ TY  +I G C 
Sbjct: 370 KGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 405



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 187/375 (49%), Gaps = 13/375 (3%)

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD---LVPDLIIYSILIDGLFK 295
           +LLV     ++ F+ ++ +     KL+    + +L  +MD   +  +L+  SILI+    
Sbjct: 1   MLLVRHTSPIIEFNKILGSL---VKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCH 57

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G++     LL   L  G   + + ++++M      G+V + +  +D+++   F  N +S
Sbjct: 58  LGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVS 117

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  L+ GLC+ G    A  L   +  R   P+++ YS++IDG CK   + + + LY  M 
Sbjct: 118 YGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMD 177

Query: 416 KRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            R + P+ +     +C+  + G +  A     + +   + P+++ F+ L+D  C  K   
Sbjct: 178 AREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALC--KEGK 235

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +  ++F  M    + P+V ++ ++I G+     +  A+ L  +ML + + PD +TY+++I
Sbjct: 236 NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 295

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL K   I+  L++   M   G   D+  Y  LL+ L K  NLD A  LF ++ +RG++
Sbjct: 296 DGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 355

Query: 591 PDIITYNTIICGYCS 605
           P + TY  +I G C 
Sbjct: 356 PTMYTYTALIDGLCK 370



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 165/353 (46%), Gaps = 19/353 (5%)

Query: 85  HVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
           H  DK+V Q  +T                 Y  L+    + G+   ++++   + D    
Sbjct: 101 HFHDKVVAQAFQTNQV-------------SYGTLLNGLCKTGETRCAIKLLRMIEDRSTR 147

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHM 200
            +  +   ++  L     V + Y L   M  +        Y  L+      G +  AF +
Sbjct: 148 PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSL 207

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             ++I +   P++ T + ++  LC  G+  NA  +F  ++ +G  PNV +++ +IN  CK
Sbjct: 208 LHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCK 265

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
             ++++A  L   M+  ++VPD + Y+ LIDGL K+GR+     L+     RG   DVV 
Sbjct: 266 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 325

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           ++S++DA     ++ +A   + +M   G  P + +Y+ LI GLC+ GRL  A  LF  +L
Sbjct: 326 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 385

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           ++     + TY+ +I G CK G   +  ++   M   G  P+AV   ++I  L
Sbjct: 386 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 438



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/397 (23%), Positives = 180/397 (45%), Gaps = 42/397 (10%)

Query: 11  VWRSINKCYCSESKT----HISD------LQFNQAN--AILANLIKTNNPTPAIQFFKWT 58
            W ++ K  C + +     H  D       Q NQ +   +L  L KT     AI+  +  
Sbjct: 82  TWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMI 141

Query: 59  HNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKM--------VIQFGKTYNFFRLFRDS 107
            +  + PN+   + +I  L +  + + A  ++ +M        VI +      F L    
Sbjct: 142 EDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQL 201

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
           +G F   +  +++N      I+  V  F+ + D               C    N+   ++
Sbjct: 202 MGAFSLLHEMILKN------INPDVYTFSILIDA-------------LCKEGKNAKQIFH 242

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            + +         Y  ++NGL +   ++ A ++ R+++ +  VP+ VT N ++  LC +G
Sbjct: 243 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 302

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +I +A +L + +   G   +VVT+++L++A CK   L+KA  L+  M E  + P +  Y+
Sbjct: 303 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 362

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LIDGL K GRLK   EL    L +G  +DV  ++ ++      G    A+    +M + 
Sbjct: 363 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN 422

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           G +PN +++ I+I+ L ++    +A  L  +++ + L
Sbjct: 423 GCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 243/505 (48%), Gaps = 34/505 (6%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           ++F   +      Y+ +I  + R   +D ++++F  M+  G   +      L++ L DS 
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNG----LLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            V + + L R M   G         G    L   G  E+A+ +   +  +G  PN+ T  
Sbjct: 300 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++  LC++G +  A  LF  +   G  PN VT++ LIN   +  +++ AF + NLM   
Sbjct: 360 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              P+++ Y+ +I G    G  K+   ++   L RG   ++V +++++  Y   G+   A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++  D M +GG  P+  SY+ LI G C+  ++  A GLF +++   L P+ +TY++LIDG
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
           +CK  KL    SL ++M + G +                              PN+  +N
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCR------------------------------PNVQTYN 569

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            L+ G  +    +   +L  +M    I P+V+T+T +I G+   GS S A+ +F +M+++
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G  P+++TYS++I  L +   +    ++F  +ER+G+ PD   Y  ++   I    ++ A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 578 LKLFGQLTDRGLEPDIITYNTIICG 602
               G++   G +P + TY  +I G
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 230/503 (45%), Gaps = 40/503 (7%)

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHM 200
           MG++    L+  L    + +  + +Y+++          +Y  ++N L + G + +A  +
Sbjct: 178 MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETI 237

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
            ++V +    P+  T   ++   C    + +A  +F+ +   G +PN VT+STLIN  C 
Sbjct: 238 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 297

Query: 261 EAKLEKAFQL--------------------------------YNLMMEMD---LVPDLII 285
             ++ +AF L                                + L ++M      P++  
Sbjct: 298 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LI GL  +G LK    L       G+  + V ++++++  V    +  A    + M 
Sbjct: 358 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  PN+++Y+ +IKG C  G   +A  +   +L R    +L+TY+++I G+C SG   
Sbjct: 418 RNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTT 477

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
               + D M   G KPD    + LI G      M  A   F + V   L PN   +  L+
Sbjct: 478 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 537

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG C+ ++      L   M     +P+V T+ VLI G+  Q + S A  L   M++ G+ 
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+V+TY+A+I GL K  + S+ L MF  M   G  P++  Y+ L+  L +E  ++ A  L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 581 FGQLTDRGLEPDIITYNTIICGY 603
           F +L   GL PD ITY  +I  Y
Sbjct: 658 FAELERHGLIPDEITYVKMIEAY 680



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 185/376 (49%), Gaps = 5/376 (1%)

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           S  D+L   G +  +  +S L+    +          Y+ M+   + P+L+IY+ +I+ L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G + +   ++    +  +  D   ++S++  +    D+  A+Q +++M   G  PN 
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++YS LI GLC  GR+ EA  L  ++++  + P+  T +  I   C  G   D + L+ +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 414 MIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M  +G +P+     A++  L ++GL+  A+  F +  R  + PN   +N L++     +R
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 +  LMG     P+++T+  +I+G    G    A+L+   ML+RG + +++TY+ 
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           II G     N +  L +  LM   G  PD   Y  L+    K   +++A  LF ++ D G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 589 LEPDIITYNTIICGYC 604
           L P+ +TY  +I GYC
Sbjct: 526 LCPNEVTYTALIDGYC 541



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 256/562 (45%), Gaps = 65/562 (11%)

Query: 101 FRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS 155
           +RLF D + + GC+     Y+ LI      G +  ++ +F  MS  G++ +      L++
Sbjct: 340 WRLFVD-MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 156 CLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
            LV++  + +Y  +   + G+  C      Y  ++ G    G  + A  +   ++QRG  
Sbjct: 399 ILVENRRI-KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
            N+VT N I+K  C +G   +A  + D++   G KP+  +++ LI  FCK +K+E AF L
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGL 517

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRL------------------------------K 300
           +N M++  L P+ + Y+ LIDG  K  +L                              K
Sbjct: 518 FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577

Query: 301 EGN-----ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           + N     EL    ++ G+  +VV +++++D     G    A++ +++M+  G LPN+++
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 637

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           YS LI+ L Q+G++ EA  LF ++    L P  +TY  +I+ +  SGK+   F+    MI
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 697

Query: 416 KRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           K G +P      +LI GL  +   +     R+  +P+      ++  C    + TD   +
Sbjct: 698 KAGCQPTLWTYGVLIKGLKNE---YLLADQRLAALPD------VVPNCSFGYQTTDQDAV 748

Query: 476 -FMLMGMYNIKP--DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             M   +  + P   V     L+  +++ G    A  L   M+ +GL PD   Y++++  
Sbjct: 749 SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCS 808

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L + +N+ + + +FK M   G    +  Y  L+  L +      A   F  +  R   PD
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 593 IITYNTIICGYCSLNSCLIDGY 614
            +    +I G       L DGY
Sbjct: 869 DVVQAVLIDGL------LRDGY 884



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 191/412 (46%), Gaps = 46/412 (11%)

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           +  +L  G +PN++ ++ +INA CK+  +  A  +   + E ++ PD   Y+ +I G  +
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD---RMLNGGFLPN 352
              L    ++       G + + V +S++++   G+ D GR  + +D    M+  G LP 
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLIN---GLCDSGRVNEAFDLIREMILHGILPT 319

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             + +  I  LC  G   +A  LF  +  +  EP++ TY++LI G C SG L+    L+ 
Sbjct: 320 AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH 379

Query: 413 NMIKRGLKPDAVVCSLLIN---------------GLMG---------------------- 435
            M + G+ P+ V  + LIN                LMG                      
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 436 ---DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
               A+      ++     NL  +NT++ G C     T  +++  LM     KPD  ++T
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G      + SA  LF +M+  GL P+ +TY+A+I G  K + +     + + M+R+
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           G  P++  YNVL++ L K+ N   A +L   + + G+ P+++TY  +I G C
Sbjct: 560 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 34/318 (10%)

Query: 293 LFKAGRLKEGNELLLTALD----RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L K+   KE     ++ LD     GL++ +  +S+++     +G     +  Y RML+ G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN++ Y+ +I  LC+ G + +A  +  +V    + P   TY+S+I G C+   L    
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            +++ M K G +P+ V                               ++TL++G C   R
Sbjct: 271 QVFNQMAKEGCEPNTVT------------------------------YSTLINGLCDSGR 300

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   L   M ++ I P   T T  I  +   G    A  LF  M  +G  P+V TY+A
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I GL     + V + +F  M R+GV P+   YN L+N+L++   +  A  +   +   G
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 589 LEPDIITYNTIICGYCSL 606
             P+I+TYN +I GYC L
Sbjct: 421 CSPNIVTYNEMIKGYCIL 438



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 167/387 (43%), Gaps = 48/387 (12%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           +  K  + F LF + + D  C     Y+ LI+ Y +  K+D +  +  +M   G   +  
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
               L+  L   N+     +LC+ M  +G       Y  +++GL + G    A  M  ++
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           I++G +PN++T + +++ L   G++  A +LF  L   G  P+ +T+  +I A+    K+
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV---- 320
           E AF     M++    P L  Y +LI GL         NE LL         DVV     
Sbjct: 687 EHAFNFLGRMIKAGCQPTLWTYGVLIKGL--------KNEYLLADQRLAALPDVVPNCSF 738

Query: 321 --------FSSVMDAYVGIGDVGRAVQTYD--------------------RMLNGGFLPN 352
                     SVM A +   D G +VQ  +                     M++ G  P+
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             +Y+ L+  L +   +  A G+F  +  +  E  L  Y  LI   C+  + ++    ++
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALR 439
           NM+ R   PD VV ++LI+GL+ D  +
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYK 885


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 237/489 (48%), Gaps = 10/489 (2%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK-----GF 178
           ++  IDE++  F  M+ M    S      L+  +V          L + M          
Sbjct: 52  KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDT 111

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            +   ++N L    ++   F +   +++ G  P++VT   ++  LC+ G +G A  L D 
Sbjct: 112 FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 171

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G + +V T+  LIN  CK  K  +A      M E +  P++++YS ++DGL K G 
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL 231

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + E   L L    +G+K ++V ++ ++      G    A    D M+  G +P++ S +I
Sbjct: 232 VSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNI 291

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+  LC++G++++A  + G +++    P + TY+SLID +C   ++ +   +++ M+ RG
Sbjct: 292 LVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRG 351

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             PD V  + LI+G      +  A+    + +++   P++  + TL+ G C++ R     
Sbjct: 352 CLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAK 411

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +LF+ M  Y   P++ T  +++ G+     LS A+ LF  M K  L  +++ YS I+ G+
Sbjct: 412 ELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGM 471

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
                ++  L +F  +   G+  ++  Y +++N   K+  LD A  L   + + G  PD 
Sbjct: 472 CSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDS 531

Query: 594 ITYNTIICG 602
            TYN  + G
Sbjct: 532 CTYNVFVQG 540



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 205/410 (50%), Gaps = 8/410 (1%)

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
            MH  +   G  P+    N ++  LC    +    S+   +L +G +P+VVTF+ LIN  
Sbjct: 100 EMHSSL---GIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGL 156

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C +  + +A +L + + +     D+  Y +LI+GL K G+  E    L    +R    +V
Sbjct: 157 CVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNV 216

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           VV+S+VMD     G V  A+     M   G  PN+++Y+ LI+GLC  GR  EA  L  +
Sbjct: 217 VVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDE 276

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GL 433
           ++   + P L + + L+D  CK GK+    S+   MI  G  PD    + LI+       
Sbjct: 277 MMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQ 336

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           M +A R F   V    +P++  + +L+ G C++K     + L   M      PDV+T T 
Sbjct: 337 MDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTT 396

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI G    G   +A  LF  M K G  P++ T + I+ GL K + +S  L +F  ME++ 
Sbjct: 397 LIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSN 456

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           +  +I IY+++L+ +     L+ AL+LF  L  +GL+ ++  Y  +I G+
Sbjct: 457 LDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGF 506



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 192/369 (52%), Gaps = 5/369 (1%)

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G KP+    + +IN+ C    +   F +   M+++ L P ++ ++ILI+GL   G +  
Sbjct: 105 LGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGR 164

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             EL+      G + DV  +  +++    +G    AV    +M    + PNV+ YS ++ 
Sbjct: 165 AVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMD 224

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GLC+ G + EA GL  ++  + ++P+L+TY+ LI G C  G+ ++  SL D M+K G+ P
Sbjct: 225 GLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 284

Query: 422 DAVVCSLLINGLMGDALRFFFQSVRMTLI-----PNLFIFNTLMDGCCRLKRATDTVKLF 476
           D    ++L++ L  +      +SV   +I     P++F +N+L+D  C   +  +  ++F
Sbjct: 285 DLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF 344

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
            LM      PD++ +T LI G     +++ A+ L  +M+K G TPDV+T++ +I G  + 
Sbjct: 345 ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQV 404

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
                   +F  M + G  P++    ++L+ L K   L  AL LF  +    L+ +I+ Y
Sbjct: 405 GRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIY 464

Query: 597 NTIICGYCS 605
           + I+ G CS
Sbjct: 465 SIILDGMCS 473



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 170/363 (46%), Gaps = 43/363 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y  LI    ++GK  E+V     M +     +P++V    +M  L     V +   LC  
Sbjct: 184 YGVLINGLCKMGKTSEAVGWLRKMEERN--WNPNVVVYSTVMDGLCKDGLVSEALGLCLE 241

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M GKG       Y  L+ GL   G  + A  +  ++++ G +P++ + N ++  LC  G+
Sbjct: 242 MSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGK 301

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A S+   ++LVG  P+V T+++LI+ +C + ++++A +++ LM+    +PD++ Y+ 
Sbjct: 302 IMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTS 361

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G  K   + +   LL   +  G   DVV +++++  +  +G    A + +  M   G
Sbjct: 362 LIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYG 421

Query: 349 FLPN-----------------------------------VISYSILIKGLCQQGRLVEAC 373
            +PN                                   ++ YSI++ G+C  G+L  A 
Sbjct: 422 QVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTAL 481

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            LF  +  + L+ ++  Y+ +I+GF K G L     L  NM + G  PD+   ++ + GL
Sbjct: 482 ELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGL 541

Query: 434 MGD 436
           + +
Sbjct: 542 VAE 544



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 172/370 (46%), Gaps = 42/370 (11%)

Query: 247 NVVTFSTLINAFCKEAKL---EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           N   F   +   CK  KL   ++A   ++ M +M+ +P +I +++L+  + K        
Sbjct: 36  NKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVK-------- 87

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
                     +K      S V + +  +G                  P+    +++I  L
Sbjct: 88  ----------MKHYTTAISLVKEMHSSLG----------------IKPDTFILNVVINSL 121

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C    +     + G +L   LEPS++T++ LI+G C  G +     L D++ K G + D 
Sbjct: 122 CHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDV 181

Query: 424 VVCSLLINGL--MG---DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
               +LINGL  MG   +A+ +  +       PN+ +++T+MDG C+    ++ + L + 
Sbjct: 182 KTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLE 241

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    IKP+++T+T LI+G+ + G    A  L  +M+K G+ PD+ + + ++  L K   
Sbjct: 242 MSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGK 301

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           I     +   M   G  PD+  YN L++    +  +D A ++F  +  RG  PDI+ Y +
Sbjct: 302 IMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTS 361

Query: 599 IICGYCSLNS 608
           +I G+C + +
Sbjct: 362 LIHGWCKIKN 371



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 8/325 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+     G+  E+  +   M  MG+   PDL  +  L+  L     + Q   +   
Sbjct: 254 YTCLIQGLCNFGRWKEAGSLLDEMMKMGVM--PDLQSLNILVDVLCKEGKIMQAKSVIGF 311

Query: 173 MRGKGFCVYEFLMNGLLRKGVIEN----AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G     F  N L+ +  ++N    A  +   ++ RG +P+IV    ++   C    
Sbjct: 312 MILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKN 371

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  L D ++ VG  P+VVT++TLI  FC+  +   A +L+  M +   VP+L   +I
Sbjct: 372 INKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAI 431

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++DGL K+  L E   L        L L++V++S ++D     G +  A++ +  +   G
Sbjct: 432 ILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKG 491

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              NV +Y+I+I G  +QG L +A  L   +      P   TY+  + G     ++    
Sbjct: 492 LQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSI 551

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL 433
                M  +G   DA    ++IN L
Sbjct: 552 KYLTMMRDKGFSVDATTTEMIINYL 576


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 245/537 (45%), Gaps = 49/537 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+  ++    D +  +   M   GI + P +    +  +     + +   L   M 
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G  R+  +   + +  ++ +R  V +  T   ++K +C +G + 
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A ++   ++  G +PNVV ++TLI  F + ++   A ++   M E  + PD+  Y+ LI
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL KA R+ E    L+  ++ GLK +   + + +  Y+   +   A +    M   G L
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN +  + LI   C++G+++EAC  +  ++ + +     TY+ L++G  K+ K+ D   +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M  +G+ PD     +LING      M  A   F + V   L PN+ I+N L+ G CR
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                   +L   M +  + P+ +T+  +I G    G L+ A  LF +M  +GL PD   
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734

Query: 526 YSAIIHGLFKGKNISVGLHMF-----------------------------------KLM- 549
           Y+ ++ G  +  ++   + +F                                   +LM 
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794

Query: 550 ---ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              +R G  P+   YN++++ L KE NL+AA +LF Q+ +  L P +ITY +++ GY
Sbjct: 795 GSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 256/544 (47%), Gaps = 52/544 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LIE Y R   + +  E+   M    I +SP     ++  +  S  +   Y + + M 
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      +Y  L+   L+     +A  + +++ ++G  P+I   N ++  L    ++ 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 231 NASSLFDVLLLVGPKPNVVTFST-----------------------------------LI 255
            A S    ++  G KPN  T+                                     LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N +CK+ K+ +A   Y  M++  ++ D   Y++L++GLFK  ++ +  E+      +G+ 
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            DV  +  +++ +  +G++ +A   +D M+  G  PNVI Y++L+ G C+ G + +A  L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
             ++ ++ L P+ +TY ++IDG+CKSG L + F L+D M  +GL PD+ V + L++G   
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 434 MGDALRF--FFQSVRMTLIPNLFIFNTLMDGCCRL-KRATDTVKLFMLM-GMYNI--KPD 487
           + D  R    F + +     +   FN L++   +  K    T  L  LM G ++   KP+
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            +T+ ++I  +  +G+L +A  LF QM    L P VITY+++++G  K    +    +F 
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL-----TDRGLEPDIITYNTIICG 602
                G+ PD  +Y+V++N  +KE     AL L  Q+      D G +  I T   ++ G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924

Query: 603 YCSL 606
           +  +
Sbjct: 925 FAKV 928



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 212/438 (48%), Gaps = 15/438 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGF--VPNIVTCNKILKRLCI---NGQIGNASS 234
            Y  L++GLL+    + A  +  +++  G    P +  C      +C+    G +  A +
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC-----ICVMSKEGVMEKAKA 368

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LFD ++  G  P    +++LI  +C+E  + + ++L   M + ++V     Y  ++ G+ 
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            +G L     ++   +  G + +VV++++++  ++     G A++    M   G  P++ 
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ LI GL +  R+ EA     +++   L+P+  TY + I G+ ++ +          M
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548

Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            + G+ P+ V+C+ LIN     G + +A   +   V   ++ +   +  LM+G  +  + 
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            D  ++F  M    I PDV ++ VLI G +  G++  A  +F +M++ GLTP+VI Y+ +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           + G  +   I     +   M   G+ P+   Y  +++   K  +L  A +LF ++  +GL
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728

Query: 590 EPDIITYNTIICGYCSLN 607
            PD   Y T++ G C LN
Sbjct: 729 VPDSFVYTTLVDGCCRLN 746



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 129/542 (23%), Positives = 236/542 (43%), Gaps = 64/542 (11%)

Query: 110 DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           D G  +  L + Y+    I+E+V  F + S MG+ L P    RL  C V  +++ ++ +L
Sbjct: 149 DDGVLFGILFDGYIAKEYIEEAV--FVFSSSMGLELVP----RLSRCKVLLDALLRWNRL 202

Query: 170 CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI-------VTCNKILKR 222
                     ++  +  G++ + V+ +    H  +I      N+           K  + 
Sbjct: 203 D---------LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRT 253

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
             +N  +  A  L + ++  G  P   T+  LI+  CK  +LE A  L   M  + +  D
Sbjct: 254 ATLN--VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
              YS+LIDGL K         L+   +  G+ +   ++   +      G + +A   +D
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M+  G +P   +Y+ LI+G C++  + +   L  ++  R +  S  TY +++ G C SG
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFN 457
            L   +++   MI  G +P+ V+ + LI     N   GDA+R   +     + P++F +N
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG-------------------- 497
           +L+ G  + KR  +     + M    +KP+  T+   I G                    
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 498 ---------------IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
                             +G +  A   +  M+ +G+  D  TY+ +++GLFK   +   
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +F+ M   G+APD+  Y VL+N   K  N+  A  +F ++ + GL P++I YN ++ G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671

Query: 603 YC 604
           +C
Sbjct: 672 FC 673



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            VG   + V F  L + +  +  +E+A  +++  M ++LVP L    +L+D L +  RL 
Sbjct: 144 FVGKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD 203

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV--GR-------------------AVQ 339
              ++    ++R +  DV  +  ++ A+   G+V  G+                   A++
Sbjct: 204 LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALK 263

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
             + M+  G +P   +Y +LI GLC+  RL +A  L  ++    +     TYS LIDG  
Sbjct: 264 LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323

Query: 400 KSGKLRDGFSLYDNMIKRG--LKP---DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           K         L   M+  G  +KP   D  +C +   G+M  A   F   +   LIP   
Sbjct: 324 KGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            + +L++G CR K      +L + M   NI     T+  +++G+ S G L  A  +  +M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           +  G  P+V+ Y+ +I    +       + + K M+  G+APDI  YN L+  L K   +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGY 603
           D A     ++ + GL+P+  TY   I GY
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGY 532



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 156/396 (39%), Gaps = 82/396 (20%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI  Y + GK+ E+   +  M D GI         LM+ L  ++ V    ++ R MRGKG
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 178 FC---------------------------------------VYEFLMNGLLRKGVIENAF 198
                                                    +Y  L+ G  R G IE A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
            +  ++  +G  PN VT   I+   C +G +  A  LFD + L G  P+   ++TL++  
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 259 CKEAKLEKAFQLY----------------------------------NLMMEMDL----V 280
           C+   +E+A  ++                                  N +M+        
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+ + Y+I+ID L K G L+   EL     +  L   V+ ++S+++ Y  +G        
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL-----EPSLLTYSSLI 395
           +D  +  G  P+ I YS++I    ++G   +A  L  Q+  +       + S+ T  +L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
            GF K G++     + +NM++    PD+     LIN
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 141/338 (41%), Gaps = 61/338 (18%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
           AS +FD+MV + G T N               Y+ L+  + R G+I+++ E+   MS  G
Sbjct: 646 ASSIFDEMV-EEGLTPNVII------------YNMLLGGFCRSGEIEKAKELLDEMSVKG 692

Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAF 198
           ++ +      ++     S  + + ++L   M+ KG      VY  L++G  R   +E A 
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752

Query: 199 ------------------------------HMHRQVIQRGF--------VPNIVTCNKIL 220
                                          +  +V+ R           PN VT N ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC  G +  A  LF  +      P V+T+++L+N + K  +  + F +++  +   + 
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELL-----LTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           PD I+YS++I+   K G   +   L+       A+D G KL +    +++  +  +G++ 
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLC-QQGRLVEA 372
            A +  + M+   ++P+  +   LI   C    + VEA
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 243/505 (48%), Gaps = 34/505 (6%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           ++F   +      Y+ +I  + R   +D ++++F  M+  G   +      L++ L DS 
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNG----LLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            V + + L R M   G         G    L   G  E+A+ +   +  +G  PN+ T  
Sbjct: 300 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++  LC++G +  A  LF  +   G  PN VT++ LIN   +  +++ AF + NLM   
Sbjct: 360 ALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              P+++ Y+ +I G    G  K+   ++   L RG   ++V +++++  Y   G+   A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++  D M +GG  P+  SY+ LI G C+  ++  A GLF +++   L P+ +TY++LIDG
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
           +CK  KL    SL ++M + G +P                              N+  +N
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRP------------------------------NVQTYN 569

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            L+ G  +    +   +L  +M    I P+V+T+T +I G+   GS S A+ +F +M+++
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G  P+++TYS++I  L +   +    ++F  +ER+G+ PD   Y  ++   I    ++ A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 578 LKLFGQLTDRGLEPDIITYNTIICG 602
               G++   G +P + TY  +I G
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 230/503 (45%), Gaps = 40/503 (7%)

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHM 200
           MG++    L+  L    + +  + +Y+++          +Y  ++N L + G + +A  +
Sbjct: 178 MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETI 237

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
            ++V +    P+  T   ++   C    + +A  +F+ +   G +PN VT+STLIN  C 
Sbjct: 238 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 297

Query: 261 EAKLEKAFQL--------------------------------YNLMMEMD---LVPDLII 285
             ++ +AF L                                + L ++M      P++  
Sbjct: 298 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LI GL  +G LK    L       G+  + V ++++++  V    +  A    + M 
Sbjct: 358 YTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  PN+++Y+ +IKG C  G   +A  +   +L R    +L+TY+++I G+C SG   
Sbjct: 418 RNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTT 477

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
               + D M   G KPD    + LI G      M  A   F + V   L PN   +  L+
Sbjct: 478 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 537

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG C+ ++      L   M     +P+V T+ VLI G+  Q + S A  L   M++ G+ 
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+V+TY+A+I GL K  + S+ L MF  M   G  P++  Y+ L+  L +E  ++ A  L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 581 FGQLTDRGLEPDIITYNTIICGY 603
           F +L   GL PD ITY  +I  Y
Sbjct: 658 FAELERHGLIPDEITYVKMIEAY 680



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 256/562 (45%), Gaps = 65/562 (11%)

Query: 101 FRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS 155
           +RLF D + + GC+     Y+ LI      G +  ++ +F  MS  G++ +      L++
Sbjct: 340 WRLFVD-MKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 156 CLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
            LV++  + +Y  +   + G+  C      Y  ++ G    G  + A  +   ++QRG  
Sbjct: 399 ILVENRRI-KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
            N+VT N I+K  C +G   +A  + D++   G KP+  +++ LI  FCK +K+E AF L
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGL 517

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRL------------------------------K 300
           +N M++  L P+ + Y+ LIDG  K  +L                              K
Sbjct: 518 FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577

Query: 301 EGN-----ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           + N     EL    ++ G+  +VV +++++D     G    A++ +++M+  G LPN+++
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 637

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           YS LI+ L Q+G++ EA  LF ++    L P  +TY  +I+ +  SGK+   F+    MI
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 697

Query: 416 KRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           K G +P      +LI GL  +   +     R+  +P+      ++  C    + TD   +
Sbjct: 698 KAGCQPTLWTYGVLIKGLKNE---YLLADQRLAALPD------VVPNCSFGYQTTDQDAV 748

Query: 476 -FMLMGMYNIKP--DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             M   +  + P   V     L+  +++ G    A  L   M+ +GL PD   Y++++  
Sbjct: 749 SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCS 808

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L + +N+ + + +FK M   G    +  Y  L+  L +      A   F  +  R   PD
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 593 IITYNTIICGYCSLNSCLIDGY 614
            +    +I G       L DGY
Sbjct: 869 DVVQAVLIDGL------LRDGY 884



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 185/376 (49%), Gaps = 5/376 (1%)

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           S  D+L   G +  +  +S L+    +          Y+ M+   + P+L+IY+ +I+ L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G + +   ++    +  +  D   ++S++  +    D+  A+Q +++M   G  PN 
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++YS LI GLC  GR+ EA  L  ++++  + P+  T +  I   C  G   D + L+ +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 414 MIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M  +G +P+     A++  L ++G++  A+  F +  R  + PN   +N L++     +R
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 +  LMG     P+++T+  +I+G    G    A+L+   ML+RG + +++TY+ 
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           II G     N +  L +  LM   G  PD   Y  L+    K   +++A  LF ++ D G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 589 LEPDIITYNTIICGYC 604
           L P+ +TY  +I GYC
Sbjct: 526 LCPNEVTYTALIDGYC 541



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 191/412 (46%), Gaps = 46/412 (11%)

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           +  +L  G +PN++ ++ +INA CK+  +  A  +   + E ++ PD   Y+ +I G  +
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD---RMLNGGFLPN 352
              L    ++       G + + V +S++++   G+ D GR  + +D    M+  G LP 
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLIN---GLCDSGRVNEAFDLIREMILHGILPT 319

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             + +  I  LC  G   +A  LF  +  +  EP++ TY++LI G C SG L+    L+ 
Sbjct: 320 AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFH 379

Query: 413 NMIKRGLKPDAVVCSLLIN---------------GLMG---------------------- 435
            M + G+ P+ V  + LIN                LMG                      
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 436 ---DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
               A+      ++     NL  +NT++ G C     T  +++  LM     KPD  ++T
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G      + SA  LF +M+  GL P+ +TY+A+I G  K + +     + + M+R+
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           G  P++  YNVL++ L K+ N   A +L   + + G+ P+++TY  +I G C
Sbjct: 560 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 34/318 (10%)

Query: 293 LFKAGRLKEGNELLLTALD----RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L K+   KE     ++ LD     GL++ +  +S+++     +G     +  Y RML+ G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN++ Y+ +I  LC+ G + +A  +  +V    + P   TY+S+I G C+   L    
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            +++ M K G +P+ V                               ++TL++G C   R
Sbjct: 271 QVFNQMAKEGCEPNTVT------------------------------YSTLINGLCDSGR 300

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   L   M ++ I P   T T  I  +   G    A  LF  M  +G  P+V TY+A
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I GL     + V + +F  M R+GV P+   YN L+N+L++   +  A  +   +   G
Sbjct: 361 LISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 589 LEPDIITYNTIICGYCSL 606
             P+I+TYN +I GYC L
Sbjct: 421 CSPNIVTYNEMIKGYCIL 438



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 167/387 (43%), Gaps = 48/387 (12%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           +  K  + F LF + + D  C     Y+ LI+ Y +  K+D +  +  +M   G   +  
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
               L+  L   N+     +LC+ M  +G       Y  +++GL + G    A  M  ++
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           I++G +PN++T + +++ L   G++  A +LF  L   G  P+ +T+  +I A+    K+
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV---- 320
           E AF     M++    P L  Y +LI GL         NE LL         DVV     
Sbjct: 687 EHAFNFLGRMIKAGCQPTLWTYGVLIKGL--------KNEYLLADQRLAALPDVVPNCSF 738

Query: 321 --------FSSVMDAYVGIGDVGRAVQTYD--------------------RMLNGGFLPN 352
                     SVM A +   D G +VQ  +                     M++ G  P+
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             +Y+ L+  L +   +  A G+F  +  +  E  L  Y  LI   C+  + ++    ++
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALR 439
           NM+ R   PD VV ++LI+GL+ D  +
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYK 885


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 230/458 (50%), Gaps = 11/458 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYE-----FLMNGLLRKGVIENAFHMHRQVIQR 207
           L     D+   G+  +    M  KGF + E     +L+  L R G +++     R+++  
Sbjct: 165 LFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLL-ALRRGGQVDSCLRFFRRMVNL 223

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
                + +   +L  LC  G +     L D +   G K NVVT++  I  + K   L   
Sbjct: 224 DVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGV 283

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            ++  LM +  +  +++ Y++LI G    G+++E   L     ++G++ DV V++S++  
Sbjct: 284 AEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISC 343

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G+V RA+  +D M + G +P+  +Y  LI G+C+ G++  A  L  ++  + ++ +
Sbjct: 344 NCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLN 403

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
            + +++LIDG+C+SG + +   L   M K+GL+ D    + + +GL       +A    F
Sbjct: 404 PVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLF 463

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             V   + PN   F TL+D  C+     +  ++F  M      P++IT+ VLI G + +G
Sbjct: 464 SMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 523

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           ++  A  L  ++  RGL PDV T +++IHG      + + L +F  M + G+ P++  Y 
Sbjct: 524 NMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYT 583

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            +++ L K+   + A KL+ ++ + GL PD   Y++++
Sbjct: 584 AMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 182/353 (51%), Gaps = 5/353 (1%)

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           A  +  +++   + +  M+ +D+   +   +I++DGL K G ++ G +L+     +G+K 
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV +++ ++ Y    D+G   +    M   G   NV++Y++LI G    G++ EA  LF
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG- 435
            ++  + +E  +  Y+S+I   C+SG ++    L+D M  +GL P A     LI+G+   
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382

Query: 436 ---DALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
              +A +     ++   I  N  IFNTL+DG C      + ++L ++M    ++ DV  +
Sbjct: 383 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 442

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             +  G+        A  L F M++RG++P+ ++++ +I    K  N      +F+ ME 
Sbjct: 443 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 502

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            G  P+I  YNVL++   K  N+  A KL  +L +RGL PD+ T  ++I G C
Sbjct: 503 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGEC 555



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 164/333 (49%), Gaps = 11/333 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++G    G IE A  +  ++ ++G   ++     I+   C +G +  A  LFD +
Sbjct: 301 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 360

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+  T+  LI+  CK  ++E A  L N M    +  + +I++ LIDG  ++G +
Sbjct: 361 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 420

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   L +    +GL+ DV  ++S+      +     A      M+  G  PN +S++ L
Sbjct: 421 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 480

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I   C++G  VEA  +F ++  +   P+++TY+ LIDG+ K G +++   L D +  RGL
Sbjct: 481 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 540

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD   C+ LI+G   D     AL+ F +  +  L+PN+  +  ++ G  +  R+ +  K
Sbjct: 541 IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFK 600

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
           L+  M    + PD   ++ L+      GSL SA
Sbjct: 601 LYDEMKETGLTPDDTVYSSLV------GSLHSA 627



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 172/351 (49%), Gaps = 36/351 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  +  IGKI+E+  +F  M + GI     +   ++SC             CR+  
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN------------CRS-- 347

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                            G ++ A  +  ++  +G +P+  T   ++  +C  GQ+  A  
Sbjct: 348 -----------------GNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQM 390

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G   N V F+TLI+ +C+   +++A +L  +M +  L  D+  Y+ +  GL 
Sbjct: 391 LVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLC 450

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  R  E   LL + ++RG+  + + F++++D Y   G+   A + +  M   G +PN+I
Sbjct: 451 KLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNII 510

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y++LI G  ++G + EA  L  ++  R L P + T +SLI G C  GK+     L+D M
Sbjct: 511 TYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEM 570

Query: 415 IKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLM 460
            +RGL P+ V  + +I+GL  D     A + + +     L P+  ++++L+
Sbjct: 571 PQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 160/365 (43%), Gaps = 38/365 (10%)

Query: 281 PDLIIYSILI---------DGLFKAGRLKEGNELL-LTALDRGLKLDVVVFSSVMD---- 326
           PDL  Y  LI         D L K+ +  E   L    A+D GL++ V V +S++D    
Sbjct: 89  PDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACN 148

Query: 327 -------------------AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
                               Y      G A++ ++ M   GF  +  S  + +  L + G
Sbjct: 149 ESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGG 208

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           ++      F +++   +E ++ + + ++DG CK G +  G  L D +  +G+K + V  +
Sbjct: 209 QVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYN 268

Query: 428 LLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
             I G      +G          +  +  N+  +  L+ G   + +  +  +LF  M   
Sbjct: 269 AFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 328

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            I+ DV  +T +I      G++  A++LF +M  +GL P   TY A+IHG+ K   +   
Sbjct: 329 GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 388

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +   M+  G+  +  I+N L++   +   +D AL+L   +  +GLE D+  YN+I  G
Sbjct: 389 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASG 448

Query: 603 YCSLN 607
            C LN
Sbjct: 449 LCKLN 453



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 4/186 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +     ++ + DE+  +   M + G+  +      L+       +  +  ++ R M 
Sbjct: 442 YNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREME 501

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++G  ++G ++ A  +  ++  RG +P++ TC  ++   CI+G++ 
Sbjct: 502 EKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVD 561

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LFD +   G  PNVVT++ +I+   K+ + E+AF+LY+ M E  L PD  +YS L+
Sbjct: 562 MALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621

Query: 291 DGLFKA 296
             L  A
Sbjct: 622 GSLHSA 627


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 248/507 (48%), Gaps = 36/507 (7%)

Query: 113 CDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC 170
           C Y++  +I  Y   G+ +++ ++   + + G   S      +++CL     V +   L 
Sbjct: 184 CAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF 243

Query: 171 RAMRGKG---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
             M+         Y  +++ L   G +E A+ +  ++      PN++T N ++ RLC   
Sbjct: 244 EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 303

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  +F+     G  P+ VT+ +LI+   K+ ++++A++L+  M++     + ++Y+
Sbjct: 304 KLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 363

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI   F  GR ++G+++    + RG K D+ + ++ MD     G+V +    ++ + + 
Sbjct: 364 SLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY 423

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GFLP+V SYSILI GL + G+  E   +F  +  +        Y++++DGFCKSGK+   
Sbjct: 424 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 483

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           + + + M ++ ++P                               +  +  ++DG  ++ 
Sbjct: 484 YEILEEMKEKCVQP------------------------------TVATYGAIVDGLAKID 513

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  +   LF       I+ +V+ ++ LI G    G +  A L+  +M+K+GLTP+V T++
Sbjct: 514 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 573

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           +++  L K + I+  L  F+ M+     P+   Y++L+N L +    + A   +  +  +
Sbjct: 574 SLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 633

Query: 588 GLEPDIITYNTIICGYCSLNSCLIDGY 614
           GL P+++TY T+I G   + + + D Y
Sbjct: 634 GLVPNVVTYTTMISGLAKVGN-ITDAY 659



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 252/504 (50%), Gaps = 14/504 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+  I+ + + G +D + + F  +   G  L PD V    ++  L  +  +G+  +L   
Sbjct: 118 YNVCIDCFGKAGNVDMACKFFHELKAQG--LKPDDVSYTSMIWVLCKAGRLGEAEELFAQ 175

Query: 173 MRGKGF--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +    C Y +  ++ G    G  E+A+ +  ++ +RG +P++V+ N IL  L    +
Sbjct: 176 MEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRK 235

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A SLF+V+     +PN  T++ +I+  C   ++E+A+++ + M    L P+L+  +I
Sbjct: 236 VDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI 294

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++D L KA +L+E  ++  +A  RG   D V + S++D     G V  A + +++ML+ G
Sbjct: 295 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 354

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N + Y+ LI+     GR  +   +F +++ R  +P L   ++ +D   K+G++  G 
Sbjct: 355 HNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 414

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM--GDALR---FFFQSVRMTLIPNLFIFNTLMDGC 463
            +++++   G  PD    S+LI+GL   G A      F    +     +   +N ++DG 
Sbjct: 415 MIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 474

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +     ++   M    ++P V T+  ++ G+A    L  A +LF +   +G+  +V
Sbjct: 475 CKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 534

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + YS++I G  K   I     + + M + G+ P++  +N LL+ L+K   ++ AL  F  
Sbjct: 535 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 594

Query: 584 LTDRGLEPDIITYNTIICGYCSLN 607
           + +    P+  TY+ +I G C + 
Sbjct: 595 MKEMKCPPNTYTYSILINGLCRVQ 618



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 241/529 (45%), Gaps = 53/529 (10%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-- 180
           VR  ++D++V   A M  +    +      L+  L ++    +  +L R M+  G+ V  
Sbjct: 21  VRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGV 80

Query: 181 --YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN--GQIGN---AS 233
             +  L+  L R+G + +A  +  +V      P+IV  N     +CI+  G+ GN   A 
Sbjct: 81  HLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYN-----VCIDCFGKAGNVDMAC 135

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             F  L   G KP+ V+++++I   CK  +L +A +L+  M     VP    Y+ +I G 
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVM---------DAYVGIGDV---------- 334
             AGR ++  +LL    +RG    VV F+S++         D  + + +V          
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 255

Query: 335 ------------GRAVQTY---DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
                       GR  + Y   D M +    PN+++ +I++  LC+  +L EA  +F   
Sbjct: 256 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 315

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL-----INGLM 434
             R   P  +TY SLIDG  K G++ + + L++ M+  G   + VV + L     I+G  
Sbjct: 316 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 375

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            D  + F + +R    P+L + NT MD   +         +F  +  Y   PDV ++++L
Sbjct: 376 EDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 435

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+   G       +F  M ++G   D   Y+A++ G  K   +     + + M+   V
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 495

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            P +A Y  +++ L K   LD A  LF +   +G+E +++ Y+++I G+
Sbjct: 496 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 544



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 167/354 (47%), Gaps = 6/354 (1%)

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + L  A  +  +L+ A     +M  +   P    Y++LI  L +A R +   ELL    +
Sbjct: 14  ADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQE 73

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G ++ V +F++++ A    G V  A+   D +      P+++ Y++ I    + G +  
Sbjct: 74  VGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 133

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI- 430
           AC  F ++  + L+P  ++Y+S+I   CK+G+L +   L+  M      P A   + +I 
Sbjct: 134 ACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 193

Query: 431 ----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                G   DA +   +      IP++  FN+++    + ++  + + LF +M   + +P
Sbjct: 194 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEP 252

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +  T+ ++I  +   G +  A  +  +M    L P+++T + ++  L K + +     +F
Sbjct: 253 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 312

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +   + G  PD   Y  L++ L K+  +D A +LF ++ D G   + + Y ++I
Sbjct: 313 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI 366



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 158/359 (44%), Gaps = 45/359 (12%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G+    +RLF   L D G +     Y+ LI N+   G+ ++  ++F  +   G      L
Sbjct: 338 GQVDEAYRLFEKML-DAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTL 396

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVI 205
           +   M C+  +  V +   +   +R  GF      Y  L++GL + G      ++   + 
Sbjct: 397 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 456

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           Q+GF  +    N ++   C +G++  A  + + +     +P V T+  +++   K  +L+
Sbjct: 457 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 516

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A+ L+       +  ++++YS LIDG  K GR+ E   +L   + +GL  +V  ++S++
Sbjct: 517 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576

Query: 326 DAYVGIGDVGRA----------------------------VQTYDR-------MLNGGFL 350
           DA V   ++  A                            VQ Y++       M   G +
Sbjct: 577 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 636

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           PNV++Y+ +I GL + G + +A  LF +       P   ++++LI+G   + +  + + 
Sbjct: 637 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 144/313 (46%), Gaps = 20/313 (6%)

Query: 89  KMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           +M+ +  ++Y F    R         YS LI    + G+  E+  IF  M   G  L   
Sbjct: 414 RMIFEDIRSYGFLPDVRS--------YSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 465

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV------YEFLMNGLLRKGVIENAFHMHR 202
               ++     S  V + Y++   M+ K  CV      Y  +++GL +   ++ A+ +  
Sbjct: 466 AYNAVVDGFCKSGKVHKAYEILEEMKEK--CVQPTVATYGAIVDGLAKIDRLDEAYMLFE 523

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +   +G   N+V  + ++      G+I  A  + + ++  G  PNV T+++L++A  K  
Sbjct: 524 EAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAE 583

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           ++ +A   +  M EM   P+   YSILI+GL +  +  +          +GL  +VV ++
Sbjct: 584 EINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYT 643

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++     +G++  A   ++R    G +P+  S++ LI+G+    R +EA     Q  + 
Sbjct: 644 TMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY----QTTVY 699

Query: 383 RLEPSLLTYSSLI 395
           +L  S  +++ L+
Sbjct: 700 QLSSSSCSWNFLV 712



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 70/160 (43%)

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           R+   P    +  L+      +R    ++L   M     +  V   T L+R +A +G ++
Sbjct: 38  RLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVA 97

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ L  ++    L PD++ Y+  I    K  N+ +    F  ++  G+ PD   Y  ++
Sbjct: 98  DALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMI 157

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            +L K   L  A +LF Q+      P    YNT+I GY S
Sbjct: 158 WVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 197



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%)

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           R +R  D V    +M     +P    +TVLI  +A       A+ L  QM + G    V 
Sbjct: 22  RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 81

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            ++ ++  L +   ++  L +   ++ + + PDI +YNV ++   K  N+D A K F +L
Sbjct: 82  LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141

Query: 585 TDRGLEPDIITYNTIICGYC 604
             +GL+PD ++Y ++I   C
Sbjct: 142 KAQGLKPDDVSYTSMIWVLC 161


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 248/507 (48%), Gaps = 36/507 (7%)

Query: 113 CDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC 170
           C Y++  +I  Y   G+ +++ ++   + + G   S      +++CL     V +   L 
Sbjct: 318 CAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF 377

Query: 171 RAMRGKG---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
             M+         Y  +++ L   G +E A+ +  ++      PN++T N ++ RLC   
Sbjct: 378 EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 437

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  +F+     G  P+ VT+ +LI+   K+ ++++A++L+  M++     + ++Y+
Sbjct: 438 KLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 497

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI   F  GR ++G+++    + RG K D+ + ++ MD     G+V +    ++ + + 
Sbjct: 498 SLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY 557

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GFLP+V SYSILI GL + G+  E   +F  +  +        Y++++DGFCKSGK+   
Sbjct: 558 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 617

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           + + + M ++ ++P                               +  +  ++DG  ++ 
Sbjct: 618 YEILEEMKEKCVQP------------------------------TVATYGAIVDGLAKID 647

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  +   LF       I+ +V+ ++ LI G    G +  A L+  +M+K+GLTP+V T++
Sbjct: 648 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 707

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           +++  L K + I+  L  F+ M+     P+   Y++L+N L +    + A   +  +  +
Sbjct: 708 SLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 767

Query: 588 GLEPDIITYNTIICGYCSLNSCLIDGY 614
           GL P+++TY T+I G   + + + D Y
Sbjct: 768 GLVPNVVTYTTMISGLAKVGN-ITDAY 793



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 252/504 (50%), Gaps = 14/504 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+  I+ + + G +D + + F  +   G  L PD V    ++  L  +  +G+  +L   
Sbjct: 252 YNVCIDCFGKAGNVDMAWKFFHELKAQG--LKPDDVSYTSMIWVLCKAGRLGEAEELFAQ 309

Query: 173 MRGKGF--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +    C Y +  ++ G    G  E+A+ +  ++ +RG +P++V+ N IL  L    +
Sbjct: 310 MEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRK 369

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A SLF+V+     +PN  T++ +I+  C   ++E+A+++ + M    L P+L+  +I
Sbjct: 370 VDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI 428

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++D L KA +L+E  ++  +A  RG   D V + S++D     G V  A + +++ML+ G
Sbjct: 429 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 488

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N + Y+ LI+     GR  +   +F +++ R  +P L   ++ +D   K+G++  G 
Sbjct: 489 HNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 548

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM--GDALR---FFFQSVRMTLIPNLFIFNTLMDGC 463
            +++++   G  PD    S+LI+GL   G A      F    +     +   +N ++DG 
Sbjct: 549 MIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 608

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +     ++   M    ++P V T+  ++ G+A    L  A +LF +   +G+  +V
Sbjct: 609 CKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 668

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + YS++I G  K   I     + + M + G+ P++  +N LL+ L+K   ++ AL  F  
Sbjct: 669 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 728

Query: 584 LTDRGLEPDIITYNTIICGYCSLN 607
           + +    P+  TY+ +I G C + 
Sbjct: 729 MKEMKCPPNTYTYSILINGLCRVQ 752



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 242/490 (49%), Gaps = 10/490 (2%)

Query: 99  NFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
           + F + +         Y+ +I+     G+++E+  I   M    ++ +   V  ++  L 
Sbjct: 375 SLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLC 434

Query: 159 DSNSVGQYYKLCRAMRGKGF---CV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
            +  + + YK+  +   +G    CV Y  L++GL +KG ++ A+ +  +++  G   N V
Sbjct: 435 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPV 494

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
               +++   I+G+  +   +F  L+  G KP++   +T ++   K  ++EK   ++  +
Sbjct: 495 VYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 554

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
                +PD+  YSILI GL KAG+ +E + +      +G  LD   +++V+D +   G V
Sbjct: 555 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 614

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
            +A +  + M      P V +Y  ++ GL +  RL EA  LF +   + +E +++ YSSL
Sbjct: 615 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 674

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           IDGF K G++ + + + + M+K+GL P+    + L++ L     + +AL  F     M  
Sbjct: 675 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 734

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            PN + ++ L++G CR+++       +  M    + P+V+T+T +I G+A  G+++ A  
Sbjct: 735 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 794

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF +    G  PD  +++A+I G+           +F+     G   +I     LL+ L 
Sbjct: 795 LFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALN 854

Query: 570 K-ECNLDAAL 578
           K EC   AA+
Sbjct: 855 KSECLEQAAI 864



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 156/623 (25%), Positives = 276/623 (44%), Gaps = 73/623 (11%)

Query: 35  ANAILANLIKTNNPTPAIQFF---KWTHNCVSSPNIAQLIHVLLQSDMRDVAS--HVFDK 89
           A+ +++ L    NP+ A  FF     +      P  A   H +L     D+A+   V ++
Sbjct: 75  ADVVISVLRSIRNPSLAAPFFLLASSSSASAPHPLPADAYHAVLPFLHHDLAALEKVLEE 134

Query: 90  M-VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           M V+ +G            L +  C  + L    VR  ++D++V   A M  +    +  
Sbjct: 135 MAVLGYG------------LPNQAC--AHLAAALVRARRLDDAVLAVAVMRRLKFRPAFS 180

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQV 204
               L+  L ++    +  +L R M+  G+ V    +  L+  L R+G + +A  +  +V
Sbjct: 181 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 240

Query: 205 IQRGFVPNIVTCNKILKRLCIN--GQIGN---ASSLFDVLLLVGPKPNVVTFSTLINAFC 259
                 P+IV  N     +CI+  G+ GN   A   F  L   G KP+ V+++++I   C
Sbjct: 241 KGSCLEPDIVLYN-----VCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLC 295

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K  +L +A +L+  M     VP    Y+ +I G   AGR ++  +LL    +RG    VV
Sbjct: 296 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 355

Query: 320 VFSSVM---------DAYVGIGDV----------------------GRAVQTY---DRML 345
            F+S++         D  + + +V                      GR  + Y   D M 
Sbjct: 356 SFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEME 415

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           +    PN+++ +I++  LC+  +L EA  +F     R   P  +TY SLIDG  K G++ 
Sbjct: 416 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 475

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLL-----INGLMGDALRFFFQSVRMTLIPNLFIFNTLM 460
           + + L++ M+  G   + VV + L     I+G   D  + F + +R    P+L + NT M
Sbjct: 476 EAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYM 535

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           D   +         +F  +  Y   PDV ++++LI G+   G       +F  M ++G  
Sbjct: 536 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 595

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
            D   Y+A++ G  K   +     + + M+   V P +A Y  +++ L K   LD A  L
Sbjct: 596 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 655

Query: 581 FGQLTDRGLEPDIITYNTIICGY 603
           F +   +G+E +++ Y+++I G+
Sbjct: 656 FEEAKSKGIELNVVLYSSLIDGF 678



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 70/160 (43%)

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           R+   P    +  L+      +R    ++L   M     +  V   T L+R +A +G ++
Sbjct: 172 RLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVA 231

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ L  ++    L PD++ Y+  I    K  N+ +    F  ++  G+ PD   Y  ++
Sbjct: 232 DALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMI 291

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            +L K   L  A +LF Q+      P    YNT+I GY S
Sbjct: 292 WVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 331



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%)

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           R +R  D V    +M     +P    +TVLI  +A       A+ L  QM + G    V 
Sbjct: 156 RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 215

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            ++ ++  L +   ++  L +   ++ + + PDI +YNV ++   K  N+D A K F +L
Sbjct: 216 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 275

Query: 585 TDRGLEPDIITYNTIICGYC 604
             +GL+PD ++Y ++I   C
Sbjct: 276 KAQGLKPDDVSYTSMIWVLC 295


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 245/537 (45%), Gaps = 49/537 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+  ++    D +  +   M   GI + P +    +  +     + +   L   M 
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G  R+  +   + +  ++ +R  V +  T   ++K +C +G + 
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A ++   ++  G +PNVV ++TLI  F + ++   A ++   M E  + PD+  Y+ LI
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL KA R+ E    L+  ++ GLK +   + + +  Y+   +   A +    M   G L
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN +  + LI   C++G+++EAC  +  ++ + +     TY+ L++G  K+ K+ D   +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M  +G+ PD     +LING      M  A   F + V   L PN+ I+N L+ G CR
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                   +L   M +  + P+ +T+  +I G    G L+ A  LF +M  +GL PD   
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734

Query: 526 YSAIIHGLFKGKNISVGLHMF-----------------------------------KLM- 549
           Y+ ++ G  +  ++   + +F                                   +LM 
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794

Query: 550 ---ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              +R G  P+   YN++++ L KE NL+AA +LF Q+ +  L P +ITY +++ GY
Sbjct: 795 GSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 256/544 (47%), Gaps = 52/544 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LIE Y R   + +  E+   M    I +SP     ++  +  S  +   Y + + M 
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      +Y  L+   L+     +A  + +++ ++G  P+I   N ++  L    ++ 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 231 NASSLFDVLLLVGPKPNVVTFST-----------------------------------LI 255
            A S    ++  G KPN  T+                                     LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N +CK+ K+ +A   Y  M++  ++ D   Y++L++GLFK  ++ +  E+      +G+ 
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            DV  +  +++ +  +G++ +A   +D M+  G  PNVI Y++L+ G C+ G + +A  L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
             ++ ++ L P+ +TY ++IDG+CKSG L + F L+D M  +GL PD+ V + L++G   
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 434 MGDALRF--FFQSVRMTLIPNLFIFNTLMDGCCRL-KRATDTVKLFMLM-GMYNI--KPD 487
           + D  R    F + +     +   FN L++   +  K    T  L  LM G ++   KP+
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            +T+ ++I  +  +G+L +A  LF QM    L P VITY+++++G  K    +    +F 
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL-----TDRGLEPDIITYNTIICG 602
                G+ PD  +Y+V++N  +KE     AL L  Q+      D G +  I T   ++ G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924

Query: 603 YCSL 606
           +  +
Sbjct: 925 FAKV 928



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/542 (23%), Positives = 237/542 (43%), Gaps = 64/542 (11%)

Query: 110 DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           D G  +  L + Y+  G I+E+V  F + S MG+ L P    RL  C V  +++ ++ +L
Sbjct: 149 DDGVLFGILFDGYIAKGYIEEAV--FVFSSSMGLELVP----RLSRCKVLLDALLRWNRL 202

Query: 170 CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI-------VTCNKILKR 222
                     ++  +  G++ + V+ +    H  +I      N+           K  + 
Sbjct: 203 D---------LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRT 253

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
             +N  +  A  L + ++  G  P   T+  LI+  CK  +LE A  L   M  + +  D
Sbjct: 254 ATLN--VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
              YS+LIDGL K         L+   +  G+ +   ++   +      G + +A   +D
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M+  G +P   +Y+ LI+G C++  + +   L  ++  R +  S  TY +++ G C SG
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFN 457
            L   +++   MI  G +P+ V+ + LI     N   GDA+R   +     + P++F +N
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG-------------------- 497
           +L+ G  + KR  +     + M    +KP+  T+   I G                    
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 498 ---------------IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
                             +G +  A   +  M+ +G+  D  TY+ +++GLFK   +   
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +F+ M   G+APD+  Y VL+N   K  N+  A  +F ++ + GL P++I YN ++ G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671

Query: 603 YC 604
           +C
Sbjct: 672 FC 673



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 212/438 (48%), Gaps = 15/438 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGF--VPNIVTCNKILKRLCI---NGQIGNASS 234
            Y  L++GLL+    + A  +  +++  G    P +  C      +C+    G +  A +
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC-----ICVMSKEGVMEKAKA 368

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LFD ++  G  P    +++LI  +C+E  + + ++L   M + ++V     Y  ++ G+ 
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            +G L     ++   +  G + +VV++++++  ++     G A++    M   G  P++ 
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ LI GL +  R+ EA     +++   L+P+  TY + I G+ ++ +          M
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548

Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            + G+ P+ V+C+ LIN     G + +A   +   V   ++ +   +  LM+G  +  + 
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            D  ++F  M    I PDV ++ VLI G +  G++  A  +F +M++ GLTP+VI Y+ +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           + G  +   I     +   M   G+ P+   Y  +++   K  +L  A +LF ++  +GL
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728

Query: 590 EPDIITYNTIICGYCSLN 607
            PD   Y T++ G C LN
Sbjct: 729 VPDSFVYTTLVDGCCRLN 746



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            VG   + V F  L + +  +  +E+A  +++  M ++LVP L    +L+D L +  RL 
Sbjct: 144 FVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD 203

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV--GR-------------------AVQ 339
              ++    ++R +  DV  +  ++ A+   G+V  G+                   A++
Sbjct: 204 LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALK 263

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
             + M+  G +P   +Y +LI GLC+  RL +A  L  ++    +     TYS LIDG  
Sbjct: 264 LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323

Query: 400 KSGKLRDGFSLYDNMIKRG--LKP---DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           K         L   M+  G  +KP   D  +C +   G+M  A   F   +   LIP   
Sbjct: 324 KGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            + +L++G CR K      +L + M   NI     T+  +++G+ S G L  A  +  +M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           +  G  P+V+ Y+ +I    +       + + K M+  G+APDI  YN L+  L K   +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGY 603
           D A     ++ + GL+P+  TY   I GY
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGY 532



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 156/396 (39%), Gaps = 82/396 (20%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI  Y + GK+ E+   +  M D GI         LM+ L  ++ V    ++ R MRGKG
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 178 FC---------------------------------------VYEFLMNGLLRKGVIENAF 198
                                                    +Y  L+ G  R G IE A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
            +  ++  +G  PN VT   I+   C +G +  A  LFD + L G  P+   ++TL++  
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 259 CKEAKLEKAFQLY----------------------------------NLMMEMDL----V 280
           C+   +E+A  ++                                  N +M+        
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+ + Y+I+ID L K G L+   EL     +  L   V+ ++S+++ Y  +G        
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL-----EPSLLTYSSLI 395
           +D  +  G  P+ I YS++I    ++G   +A  L  Q+  +       + S+ T  +L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
            GF K G++     + +NM++    PD+     LIN
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 141/338 (41%), Gaps = 61/338 (18%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
           AS +FD+MV + G T N               Y+ L+  + R G+I+++ E+   MS  G
Sbjct: 646 ASSIFDEMV-EEGLTPNVII------------YNMLLGGFCRSGEIEKAKELLDEMSVKG 692

Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAF 198
           ++ +      ++     S  + + ++L   M+ KG      VY  L++G  R   +E A 
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752

Query: 199 ------------------------------HMHRQVIQRGF--------VPNIVTCNKIL 220
                                          +  +V+ R           PN VT N ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC  G +  A  LF  +      P V+T+++L+N + K  +  + F +++  +   + 
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELL-----LTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           PD I+YS++I+   K G   +   L+       A+D G KL +    +++  +  +G++ 
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLC-QQGRLVEA 372
            A +  + M+   ++P+  +   LI   C    + VEA
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 243/519 (46%), Gaps = 63/519 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNS----VGQYYK 168
           +S LIE Y   G  +++VE F+ M D      PDL     ++  LV   +    +  Y +
Sbjct: 131 FSVLIEAYSEAGMDEKAVESFSLMRDFDC--KPDLFAFNLILHFLVRKEAFLLALAVYNQ 188

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + +         Y  L++GL +    ++A  +  ++  RG +PN +  + +L  LC   +
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +A  LF  +   G   +++T++ L+N FCK   L+ AF L  L+ +   +  +I Y  
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+GLF+A R +E +                                     Y +ML   
Sbjct: 309 LINGLFRARRYEEAH-----------------------------------MWYQKMLREN 333

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V+ Y+I+I+GL Q+GR+ EA  L G++  R L P  + Y++LI GFC  G L +  
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 409 SLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           SL   + K    P+      ++C +  NGL+  A   F +  ++  +P++  FN+L++G 
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 464 CRLKRATDTVKLFMLMGMYNIKP--------------DVITHTVLIRGIASQGSLSSAIL 509
           C+  R  +   LF  M +   KP              D+ +  V++  +   G +  A  
Sbjct: 454 CKANRLEEARLLFYQMEIVR-KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYK 512

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           L  Q++  G+ PD+ TY+ +I+G  K  NI+    +FK M+  G  PD   Y  L++ L 
Sbjct: 513 LLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLY 572

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +    + AL++F Q+  +G  P+  TY TI+   C  N+
Sbjct: 573 RAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENN 611



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 175/363 (48%), Gaps = 40/363 (11%)

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           +  ++I  L K    +   ++L    +  +K+    FS +++AY   G   +AV+++  M
Sbjct: 95  VQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLM 154

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
            +    P++ ++++++  L ++   + A  ++ Q+L   L P ++TY  LI G CK+ K 
Sbjct: 155 RDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKT 214

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
           +D   L+D M  RG+ P+ ++ S++++GL     + DA R F +        +L  +N L
Sbjct: 215 QDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVL 274

Query: 460 MDGCC-----------------------------------RLKRATDTVKLFMLMGMYNI 484
           ++G C                                   R +R  +    +  M   NI
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENI 334

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           KPDV+ +T++IRG++ +G ++ A+ L  +M +RGL PD I Y+A+I G      +     
Sbjct: 335 KPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAES 394

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +   + ++   P+   Y++L+  + K   ++ A  +F ++   G  P ++T+N++I G C
Sbjct: 395 LRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454

Query: 605 SLN 607
             N
Sbjct: 455 KAN 457



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/429 (20%), Positives = 182/429 (42%), Gaps = 64/429 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I    + G++ E++ +   M++ G  L PD +    L+    D   + +   L R 
Sbjct: 341 YTIMIRGLSQEGRVTEALTLLGEMTERG--LRPDTICYNALIKGFCDMGYLDEAESL-RL 397

Query: 173 MRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
              K  C      Y  L+ G+ + G+I  A H+ +++ + G +P++VT N ++  LC   
Sbjct: 398 EISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKAN 457

Query: 228 QIGNASSLFDVLLLVGPKP--------------NVVTFSTLINAFCKEAKLEKAFQLYNL 273
           ++  A  LF  + +V  KP              ++ +   ++   C+   + KA++L   
Sbjct: 458 RLEEARLLFYQMEIVR-KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQ 516

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           +++  ++PD+  Y+ILI+G  K                                    G+
Sbjct: 517 LVDSGVLPDIRTYNILINGFCK-----------------------------------FGN 541

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           +  A + +  M   G +P+ ++Y  LI GL + GR  +A  +F Q++ +   P   TY +
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601

Query: 394 LIDGFCKSGKLRDGFSLYDNMIK--RGLKPDA--VVCSLLINGLMGDALRFFFQSVRMTL 449
           ++   C+   +    S++   ++  RG + +   VV     N  +  A+R   +    + 
Sbjct: 602 IMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSK 661

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
             +L  +   + G  + KR  +   +F ++  + +     +  +LI  +    +L  A+ 
Sbjct: 662 NFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMD 721

Query: 510 LFFQMLKRG 518
           +F   L+RG
Sbjct: 722 VFLFTLERG 730


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 151/568 (26%), Positives = 254/568 (44%), Gaps = 80/568 (14%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ L+  Y + G+   ++E+  YM   GI          +  L  ++   + Y L + MR
Sbjct: 1022 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 1081

Query: 175  GK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             +        Y  L+NG +++G I  A  +  ++ +    PN VT N ++   C  G   
Sbjct: 1082 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 1141

Query: 231  NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
             A  L D +   G + N VT+ TL+N  CK  K E A +L   M   D+V   I Y++LI
Sbjct: 1142 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 1201

Query: 291  DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            DGL K G L E  +L+      G+  DV+ +SS+++ +  +G++  A +   RM   G +
Sbjct: 1202 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 1261

Query: 351  PNVISYSILIKGLCQQGRLVEA------------------CGLFGQVLIRR--------- 383
             N I YS LI   CQ G + EA                  C +    L R          
Sbjct: 1262 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 1321

Query: 384  --------LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-------------- 421
                    L P+ +TY  +I+G+   G   + FS +D+MIK G  P              
Sbjct: 1322 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 1381

Query: 422  ---------------------DAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFI 455
                                 D+V+ + L+     +G + +A+  F + V+  ++P+ + 
Sbjct: 1382 GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 1441

Query: 456  FNTLMDGCCRLKRATDTVKLF-MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +++L+ G CR  +A   V LF   MG   + P+ + +T L+ G++  G   +A   F +M
Sbjct: 1442 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEM 1501

Query: 515  LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            +K+G  PD + ++AII    +   +      F  M   GV P++A YN+LL+   K+  L
Sbjct: 1502 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 1561

Query: 575  DAALKLFGQLTDRGLEPDIITYNTIICG 602
               L L+  +   G+ PD +T++++I G
Sbjct: 1562 LRYLSLYSTMMREGIFPDKLTFHSLILG 1589



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 237/489 (48%), Gaps = 20/489 (4%)

Query: 123  VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
            V+    D +  I  ++  MGI       + +   L+D+      Y LC ++      V++
Sbjct: 874  VKARMYDSAKSILRHLCQMGIG-----SKSIFGALMDT------YPLCNSIPS----VFD 918

Query: 183  FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
             L+   L++G+I+ A      V   GF P++ TCN IL  +  + +     SLF  +   
Sbjct: 919  LLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK 978

Query: 243  GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
            G  PNV TF+ LIN  C E  L+KA  L   M E   VP ++ Y+ L++   K GR K  
Sbjct: 979  GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 1038

Query: 303  NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             EL+   + +G++ DV  ++  +D         +A     +M      PN ++Y+ LI G
Sbjct: 1039 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 1098

Query: 363  LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
              ++G++  A  +F ++    L P+ +TY++LI G C  G   +   L D+M   GL+ +
Sbjct: 1099 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 1158

Query: 423  AVVCSLLINGLMG----DALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
             V    L+NGL      +  +   + +R+  ++     +  L+DG C+     + V+L  
Sbjct: 1159 EVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVG 1218

Query: 478  LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
             M    + PDVIT++ LI G    G++ SA  +  +M + GL  + I YS +I+   +  
Sbjct: 1219 NMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHG 1278

Query: 538  NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            N++  + ++ +M  NG   D    NVL++ L ++  L  A K    ++  GL P+ ITY+
Sbjct: 1279 NVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYD 1338

Query: 598  TIICGYCSL 606
             II GY S+
Sbjct: 1339 CIINGYGSI 1347



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 148/615 (24%), Positives = 265/615 (43%), Gaps = 61/615 (9%)

Query: 36   NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
            N  + NL   +    A    K     + SPN      LI+  ++     VA+ VF++M  
Sbjct: 1058 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMS- 1116

Query: 93   QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
            +F  + N               Y+ LI  +  +G  +E++ +  +M   G+ L+      
Sbjct: 1117 KFDLSPNCVT------------YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT 1164

Query: 153  LMSCLVDSNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
            L++ L          +L   MR      G   Y  L++GL + G+++ A  +   + + G
Sbjct: 1165 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 1224

Query: 209  FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
              P+++T + ++   C  G I +A  +   +   G   N + +STLI  FC+   + +A 
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 1284

Query: 269  QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            ++Y +M       D    ++L+  L + G+L E  + L      GL  + + +  +++ Y
Sbjct: 1285 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 1344

Query: 329  VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA---------------- 372
              IGD   A   +D M+  G  P+  +Y  L+KGLC+ G LVEA                
Sbjct: 1345 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 1404

Query: 373  -------------------CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
                                 LF +++   + P   TYSSL+ G C+ GK      L+  
Sbjct: 1405 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 1464

Query: 414  MIKRG-LKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             + RG L P+ V+ + L++GL        A  FF + ++    P+   FN ++D C R  
Sbjct: 1465 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 1524

Query: 468  RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
            +       F  M  + + P++ T+ +L+ G + + +L   + L+  M++ G+ PD +T+ 
Sbjct: 1525 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 1584

Query: 528  AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++I GL K     +G+ +   M   G   D   +N+L+N   +   +  A  L   +   
Sbjct: 1585 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 1644

Query: 588  GLEPDIITYNTIICG 602
            G+ PD  TYN I  G
Sbjct: 1645 GVFPDRDTYNHIFNG 1659



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 150/641 (23%), Positives = 253/641 (39%), Gaps = 121/641 (18%)

Query: 51   AIQFFKWTHNCVSSPNIAQ---------LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFF 101
            A++F KW    +  P +             H+L+++ M D A  +   +      + + F
Sbjct: 844  ALKFLKWV---IKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIF 900

Query: 102  RLFRDSL---GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
                D+          +  LI  Y++ G ID +VE F  +  +G   S      +++ +V
Sbjct: 901  GALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMV 960

Query: 159  DSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
                    + L R M  KG C                               PN+ T N 
Sbjct: 961  KDKRTELVWSLFREMSDKGIC-------------------------------PNVGTFNI 989

Query: 219  ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
            ++  LC+ G +  A +L   +   G  P +VT++TL+N +CK+ + + A +L + M+   
Sbjct: 990  LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 1049

Query: 279  LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
            +  D+  Y++ ID L    R  +   LL       +  + V ++++++ +V  G +G A 
Sbjct: 1050 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 1109

Query: 339  QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV------------------- 379
            Q ++ M      PN ++Y+ LI G C  G   EA  L   +                   
Sbjct: 1110 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 1169

Query: 380  -------LIRRLEPSL---------LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
                   L +RL   +         + Y+ LIDG CK+G L +   L  NM K G+ PD 
Sbjct: 1170 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 1229

Query: 424  VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            +  S LING      +  A     +  R  L+ N  I++TL+   C+    T+ +K++ +
Sbjct: 1230 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAV 1289

Query: 479  -----------------------------------MGMYNIKPDVITHTVLIRGIASQGS 503
                                               M    + P+ IT+  +I G  S G 
Sbjct: 1290 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 1349

Query: 504  LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              +A   F  M+K G  P   TY +++ GL KG N+         +     A D  +YN 
Sbjct: 1350 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNT 1409

Query: 564  LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            LL    K  NL  A+ LF ++    + PD  TY++++ G C
Sbjct: 1410 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLC 1450



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 210/450 (46%), Gaps = 10/450 (2%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ L+    + G + E+V +F  M    +         L++ L           L     
Sbjct: 1407 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 1466

Query: 175  GKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            G+G       +Y  L++GL + G  + AF+   +++++G  P+ V  N I+      GQ+
Sbjct: 1467 GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQM 1526

Query: 230  GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
              A+  F  +   G  PN+ T++ L++ F K+  L +   LY+ MM   + PD + +  L
Sbjct: 1527 MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSL 1586

Query: 290  IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
            I GL K+G    G +LL   +  G   D   F+ +++ Y   G + +A    + M   G 
Sbjct: 1587 ILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGV 1646

Query: 350  LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             P+  +Y+ +  GL ++    E+  +  ++L   + P    Y +LI+G C+ G ++  F 
Sbjct: 1647 FPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFK 1706

Query: 410  LYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
            L D M   G     V  S ++ GL+      DA+      +RM L+P +  F TLM   C
Sbjct: 1707 LKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC 1766

Query: 465  RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
            R  +  + +KL  +M +  +K DV+ + VLI G+ + G  ++A  L+ +M  R L P++ 
Sbjct: 1767 RDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNIT 1826

Query: 525  TYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
            TY+ ++  +    N+  G  +   ++  G+
Sbjct: 1827 TYAVLVDAISAANNLIQGEKLLTDLQERGL 1856



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 144/592 (24%), Positives = 248/592 (41%), Gaps = 81/592 (13%)

Query: 102  RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            R++R  L      YS LI N+ + G + E+++++A M+  G          L+S L    
Sbjct: 1254 RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDG 1313

Query: 162  SVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP------ 211
             +G+  K    M   G       Y+ ++NG    G   NAF     +I+ G  P      
Sbjct: 1314 KLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYG 1373

Query: 212  ----------NIVTCNKILKRL-------------------CINGQIGNASSLFDVLLLV 242
                      N+V   K L RL                   C +G +  A +LFD ++  
Sbjct: 1374 SLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 1433

Query: 243  GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM-EMDLVPDLIIYSILIDGLFKAGRLKE 301
               P+  T+S+L+   C++ K   A  L+   M    L P+ ++Y+ L+DGL KAG  K 
Sbjct: 1434 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 1493

Query: 302  GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
                    + +G   D V F++++D+    G + +A   +  M   G  PN+ +Y+IL+ 
Sbjct: 1494 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 1553

Query: 362  GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG------------------- 402
            G  ++  L+    L+  ++   + P  LT+ SLI G  KSG                   
Sbjct: 1554 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA 1613

Query: 403  ----------------KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
                            K+R  F L + M   G+ PD    + + NGL       ++    
Sbjct: 1614 DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 1673

Query: 442  FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
             + +   +IP    + TL++G CR+       KL   M         +  + ++RG+   
Sbjct: 1674 HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 1733

Query: 502  GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
            G    A+L+   ML+  L P + T++ ++H   +   I+  L +  +ME  G+  D+  Y
Sbjct: 1734 GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAY 1793

Query: 562  NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
            NVL+  +    +  AA +L+ ++  R L P+I TY  ++    + N+ LI G
Sbjct: 1794 NVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANN-LIQG 1844


>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
          Length = 648

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 253/518 (48%), Gaps = 44/518 (8%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCL 157
           F RL R  LG   C Y+ LI+ + + G++D++ E+F  M +  +  SPD+V    L+  L
Sbjct: 52  FGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSV--SPDVVTYNSLIDGL 109

Query: 158 VDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
             +  + +  ++   M   G       Y  L+ G    G+ + +  + +++   G +P +
Sbjct: 110 CKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCV 169

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           V CN  +  LC + +I  A  +FD ++L GPKPN++++STL++ +  E        L NL
Sbjct: 170 VNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNL 229

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M+   +VP+   ++ILI+   + G + +   +     ++G+  D V F++V+ +   IG 
Sbjct: 230 MVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 289

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY-S 392
           +  A+  ++ M++ G  P+   Y  LI+G C  G LV+A  L  +++ + + P  + Y S
Sbjct: 290 LDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 349

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF------ 441
           S+I+   K G++ +G  + D M++ G +P+ V  + L+ G      M +AL +       
Sbjct: 350 SIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQL 409

Query: 442 -------FQSVRMTLIPNLF-------------IFNTLMDGCCRLKRATDTVKLFM--LM 479
                  + + R T    +F              +  ++ G CR    TD   + +  L 
Sbjct: 410 ALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCR-NNCTDEANMLLEKLF 468

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
            M N+K D+IT  ++I  +   G    A  LF  +   GL P V TY+ +I  L K ++ 
Sbjct: 469 AM-NVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESY 527

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
               ++F  +E++G APD  + N ++ ML+K+  +  A
Sbjct: 528 EEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKA 565



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 213/423 (50%), Gaps = 35/423 (8%)

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           +L   C   ++  A ++F  LL  G  P+V +++TLI+ F KE +++KA++L+  M+E  
Sbjct: 37  VLPAECTGPEL--ALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQS 94

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           + PD++ Y+ LIDGL K   + +   +L   +D G++ +   ++S++  Y   G    +V
Sbjct: 95  VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESV 154

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           + +  M + G +P V++ +  I  LC+  R+ EA  +F  ++++  +P++++YS+L+ G+
Sbjct: 155 RVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGY 214

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNL 453
              G   +  SL + M+ +G+ P+    ++LIN     G+M  A+  F       +IP+ 
Sbjct: 215 AAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 274

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             F T++   CR+ R  D +  F  M    + P    +  LI+G  + G L  A  L  +
Sbjct: 275 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISE 334

Query: 514 MLKRGLTPDVITY-SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN------ 566
           M+ + + P  + Y S+II+ LFK   ++ G  +  LM + G  P++  +N L+       
Sbjct: 335 MMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVG 394

Query: 567 ---------MLIKECNLD-----------AALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
                    ML  +  L+           AA K+F ++ + G    I TY  ++ G C  
Sbjct: 395 NMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCR- 453

Query: 607 NSC 609
           N+C
Sbjct: 454 NNC 456



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/500 (21%), Positives = 218/500 (43%), Gaps = 67/500 (13%)

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           +L R   G   C Y  L++G  ++G ++ A+ +  ++I++   P++VT N ++  LC   
Sbjct: 54  RLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTK 113

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTL--------------------------------- 254
           ++  +  + + ++  G +PN  T+++L                                 
Sbjct: 114 EMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCN 173

Query: 255 --INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
             I+A C+  ++++A  +++ M+     P++I YS L+ G    G     N L+   + +
Sbjct: 174 SFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSK 233

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G+  +   F+ +++AY   G + +A+  ++ M N G +P+ ++++ +I  LC+ GRL +A
Sbjct: 234 GIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 293

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP------DAVVC 426
              F  ++   + PS   Y  LI G C  G+L     L   M+ + + P       +++ 
Sbjct: 294 LHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 353

Query: 427 SLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL-------------------- 466
           +L   G + +        V+    PN+  FN+LM+G C +                    
Sbjct: 354 NLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLALNR 413

Query: 467 ------KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
                 +R T   K+F  M        + T+ V++ G+        A +L  ++    + 
Sbjct: 414 IVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 473

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
            D+IT++ +I  + K         +F  +   G+ P +  YN++++ LIKE + + A  L
Sbjct: 474 FDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNL 533

Query: 581 FGQLTDRGLEPDIITYNTII 600
           F  +   G  PD    N I+
Sbjct: 534 FISVEKSGRAPDSRLLNHIV 553



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 106/511 (20%), Positives = 208/511 (40%), Gaps = 92/511 (18%)

Query: 66  NIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRI 125
           N    IH L + +    A  +FD MV++ G   N               YS L+  Y   
Sbjct: 171 NCNSFIHALCRHNRIKEAKDIFDSMVLK-GPKPNII------------SYSTLLHGYAAE 217

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VY 181
           G                             C  + NS      L   M  KG       +
Sbjct: 218 G-----------------------------CFANMNS------LVNLMVSKGIVPNHRFF 242

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             L+N   R G+++ A  +   +  +G +P+ VT   ++  LC  G++ +A   F+ ++ 
Sbjct: 243 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVD 302

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY-SILIDGLFKAGRLK 300
           +G  P+   +  LI   C   +L KA +L + MM  D+ P  + Y S +I+ LFK GR+ 
Sbjct: 303 IGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVA 362

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           EG +++   +  G + +VV F+S+M+ Y  +G++  A+  Y  + +   L  +++Y    
Sbjct: 363 EGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALH-YLMLWHQLALNRIVTY---- 417

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
                  R   A  +F +++      S+ TY  ++ G C++    +   L + +    +K
Sbjct: 418 ----MARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 473

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            D +  +++I+ ++                              ++ R  +  +LF  + 
Sbjct: 474 FDIITFNIVISAML------------------------------KVGRRQEAKELFAAIS 503

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
            Y + P V T+ ++I  +  + S   A  LF  + K G  PD    + I+  L K   ++
Sbjct: 504 TYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVA 563

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
              +   +++ N +  + +  ++L ++  +E
Sbjct: 564 KASNYLSIIDENNLTLEASTISLLASLFSRE 594


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 214/406 (52%), Gaps = 7/406 (1%)

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK--PNVVTFSTLINAFC 259
           R   + G  P++ +   +LK LC   +   A  L  ++   G    PNVV+++T+I+ F 
Sbjct: 73  RWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFF 132

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           KE ++ KA+ L+  M++  + PD++  + +IDGL K   + +  E+L    D+ +  D  
Sbjct: 133 KEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCT 192

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            ++S++  Y+  G +  AV+   +M   G  PN ++YS+LI  LC+ G   EA  +   +
Sbjct: 193 TYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSM 252

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLM 434
           +  R  P++ TY  L+ G+   G L +  +L D M++ G++PD  + ++ I      G +
Sbjct: 253 IQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRL 312

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A+  F +  +  L+P++  + T++DG C++ R    +  F  M    + PD++  T L
Sbjct: 313 DEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNL 372

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G +  G    A  LF++M+ RG+ P V+ ++ +I  LFK   ++    +F LM    V
Sbjct: 373 IHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASV 432

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            P++  YN +++       LD  LKL   +   GL+P+ +T+NT++
Sbjct: 433 KPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLL 478



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 209/445 (46%), Gaps = 30/445 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++      K +E+V++   M++ G +  P++V    ++      + VG+ Y L   
Sbjct: 87  YTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCE 146

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G          +++GL +   ++ A  + RQ+  +  +P+  T N ++     +GQ
Sbjct: 147 MLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQ 206

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +   +   G  PN VT+S LI+  CK     +A ++ N M++    P++  Y  
Sbjct: 207 LKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGG 266

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ G    G L E N L+   +  G++ D  +F+  + AYV  G +  A+ T+++M   G
Sbjct: 267 LLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQG 326

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            +P++ISY  +I GLC+ GRL  A   F Q++   L P ++ +++LI GF   GK     
Sbjct: 327 LMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAE 386

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M+ RG++P  VV + +I+     G + +A   F      ++ PN+  +N ++ G 
Sbjct: 387 ELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGY 446

Query: 464 CRLKRATDTVKLF--ML-----------------MGMYNIKPDVITHTVLIRGIASQGSL 504
               +  + +KL   ML                 M    +KPDV T   LI      G +
Sbjct: 447 FLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRI 506

Query: 505 SSAILLFFQMLKRGLTPDVITYSAI 529
              + LF +ML +    D +T + I
Sbjct: 507 EDVLTLFREMLSKAAKTDTVTENII 531



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 197/407 (48%), Gaps = 16/407 (3%)

Query: 93  QFGKTYNFF-RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           + GK Y  F  +    +       + +I+   ++  +D++ E+   M D  I        
Sbjct: 136 EVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYN 195

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L+   + S  + +  ++ + M   G       Y  L++ L + G    A  +   +IQ 
Sbjct: 196 SLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQS 255

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
              PN+ T   +L      G +   ++L D+++  G +P+   F+  I A+ K  +L++A
Sbjct: 256 RGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEA 315

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
              +N M +  L+PD+I Y  +IDGL K GRL          +D GL  D+VVF++++  
Sbjct: 316 MLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHG 375

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +   G   +A + +  M++ G  P V+ ++ +I  L ++G++ EA  LF  + I  ++P+
Sbjct: 376 FSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPN 435

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
           +++Y+++I G+  +GKL +   L D+M+  GLKP+AV      N L+ D L        M
Sbjct: 436 VVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVT----FNTLLDDML-------SM 484

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            L P++   NTL+D CC   R  D + LF  M     K D +T  ++
Sbjct: 485 GLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 165/336 (49%), Gaps = 8/336 (2%)

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           + P  + Y+ILI      G L      L   +  GL+ + + F+ ++           A+
Sbjct: 9   VAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAM 68

Query: 339 QTYDRMLNG-GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI--RRLEPSLLTYSSLI 395
               R     G  P+V SY++L+KGLC + +  EA  L   +        P++++Y+++I
Sbjct: 69  NIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVI 128

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI 450
            GF K  ++   ++L+  M+ RG+ PD V C+ +I+GL     M  A     Q     ++
Sbjct: 129 HGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIM 188

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P+   +N+L+ G     +  + V++   M  +   P+ +T+++LI  +   G  + A  +
Sbjct: 189 PDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREI 248

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
              M++    P+V TY  ++HG     ++    ++  LM +NGV PD  I+N+ +   +K
Sbjct: 249 LNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVK 308

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              LD A+  F ++  +GL PDII+Y T+I G C +
Sbjct: 309 CGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKI 344



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 182/401 (45%), Gaps = 33/401 (8%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            +   P  VT   ++   C  G +  A +    ++  G + N ++F+ ++   C E +  
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 266 KAFQLY-NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG--LKLDVVVFS 322
            A  +      ++   PD+  Y++L+ GL    + +E  +L+    + G     +VV ++
Sbjct: 66  DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYT 125

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +V+  +    +VG+A   +  ML+ G  P+V++ + +I GLC+   + +A  +  Q+  +
Sbjct: 126 TVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK 185

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            + P   TY+SL+ G+  SG+L++                              A+R   
Sbjct: 186 HIMPDCTTYNSLVHGYLSSGQLKE------------------------------AVRILK 215

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           Q  R    PN   ++ L+D  C+    T+  ++   M      P+V T+  L+ G A++G
Sbjct: 216 QMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKG 275

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L     L   M++ G+ PD   ++  I+   K   +   +  F  M + G+ PDI  Y 
Sbjct: 276 DLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYG 335

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +++ L K   LDAA+  F Q+ D GL PDI+ +  +I G+
Sbjct: 336 TMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGF 376



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 118/231 (51%), Gaps = 8/231 (3%)

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           +++ P+ +TY+ LI   C  G L   F+    +IK GL+ +A+  + ++  L       D
Sbjct: 7   KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66

Query: 437 ALRFFFQ-SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY--NIKPDVITHTV 493
           A+    + + ++   P++F +  L+ G C  K+  + V L  +M     +  P+V+++T 
Sbjct: 67  AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT 126

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I G   +  +  A  LF +ML RG+ PDV+T ++II GL K + +     + + M    
Sbjct: 127 VIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKH 186

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + PD   YN L++  +    L  A+++  Q++  G  P+ +TY+ +I   C
Sbjct: 187 IMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLC 237



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 38/167 (22%)

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL-------------------- 519
           G   + P  +T+T+LI      G L+ A     Q++K GL                    
Sbjct: 5   GSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRT 64

Query: 520 ----------------TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG--VAPDIAIY 561
                           TPDV +Y+ ++ GL   K     + +  +M  +G    P++  Y
Sbjct: 65  SDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSY 124

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
             +++   KE  +  A  LF ++ DRG+ PD++T N+II G C + +
Sbjct: 125 TTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQA 171


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 236/482 (48%), Gaps = 50/482 (10%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y  ++    R G ++ AF    +VI  G   + +  + +LK LC   +  +A    D
Sbjct: 99  IATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDA---MD 155

Query: 238 VLLL----VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD-LVP-DLIIYSILID 291
           ++L     +G KP++ +++ L+   C +   ++A  L ++M +     P D++ Y+ +I+
Sbjct: 156 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 215

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL + G+L +   L    LDRG   DVV +SS++ A      + +A Q + RM+  G +P
Sbjct: 216 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 275

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           + I Y+ L+ G C  G+  EA G+F ++    +EP ++TY++L+D  CK+GK  +   ++
Sbjct: 276 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 335

Query: 412 DNMIKRGLKPDAVVCSLLING-------------------------------LMG----- 435
           D+++KRG KPD+     L++G                               +MG     
Sbjct: 336 DSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH 395

Query: 436 ----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
               +AL  F    +  L P++  + T++D  C   R  D +  F  +    + P+++  
Sbjct: 396 NKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVF 455

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           T LI G+ +         L F+M+ RG+  D I ++AI+  L K   +    ++F LM R
Sbjct: 456 TTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR 515

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLI 611
            G+ P+   YN L++    +  +D A+KL G +   G++P  +TYNTII GY S N  + 
Sbjct: 516 IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGY-SQNGRIE 574

Query: 612 DG 613
           DG
Sbjct: 575 DG 576



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 220/461 (47%), Gaps = 15/461 (3%)

Query: 134 IFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRG-KGFC-----VYEFLM 185
           +   M ++G    PDL     L+  L D  +  Q   L   M   KG C      Y  ++
Sbjct: 157 VLRRMPELGC--KPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVI 214

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           NGLLR+G ++ A+ +   ++ RG  P++VT + I+  L     +  A+ +F  ++  G  
Sbjct: 215 NGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVM 274

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+ + +++L++ +C   K ++A  ++  M    + PD++ Y+ L+D L K G+  E  ++
Sbjct: 275 PDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKI 334

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
             + + RG K D   + +++  Y   G +       D M+  G       +++++    +
Sbjct: 335 FDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAK 394

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
             ++ EA  +F  +  + L P ++ Y +++D  C +G++ D  S ++++   GL P+ VV
Sbjct: 395 HNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVV 454

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            + LI+GL             F+ +   +  +   FN +M   C+  R  +   LF LM 
Sbjct: 455 FTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMV 514

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              I+P+  T+  LI G    G +  A+ L   M+  G+ P  +TY+ II+G  +   I 
Sbjct: 515 RIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIE 574

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            GL + + M+  GV P I  Y +LL  L +     AA +L+
Sbjct: 575 DGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELY 615



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 198/427 (46%), Gaps = 53/427 (12%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME---MDLVPDLI 284
           + G+A  +FD LL  G + ++   +  ++   + A    A  L+N M         P++ 
Sbjct: 42  EPGDAHQVFDRLLKRGDRASIFDLNRALSDVAR-ASPAVAISLFNRMPRAGATSAAPNIA 100

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD-- 342
            Y I+I    + GRL      +   +  GL++  ++FS ++    G+ D  R     D  
Sbjct: 101 TYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLK---GLCDRRRTSDAMDIV 157

Query: 343 --RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR--RLEPSLLTYSSLIDGF 398
             RM   G  P++ SY+IL+KGLC      +A  L   +     R    ++ Y+++I+G 
Sbjct: 158 LRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGL 217

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
            + G+L   +SL+D M+ RG  PD V  S +I+ L     M  A + F + V+  ++P+ 
Sbjct: 218 LREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDC 277

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
            ++ +L+ G C   +  + + +F  M  + ++PDV+T+T L+  +   G  + A  +F  
Sbjct: 278 IMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDS 337

Query: 514 MLKRGLTPDVITYSAIIHG---------------LFKGKNISVGLHMFKL---------- 548
           ++KRG  PD  TY  ++HG               L   K + +G H+F +          
Sbjct: 338 LVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNK 397

Query: 549 ----------MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
                     M + G+ PDI  Y  +L++L     +D AL  F  L   GL P+I+ + T
Sbjct: 398 VDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTT 457

Query: 599 IICGYCS 605
           +I G C+
Sbjct: 458 LIHGLCT 464



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 211/413 (51%), Gaps = 13/413 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I   +R G++D++  +F  M D G   SPD+V    ++S L  + ++ +  ++   
Sbjct: 210 YTTVINGLLREGQLDKAYSLFDAMLDRGP--SPDVVTYSSIISALSKTQAMDKATQVFTR 267

Query: 173 MRGKGF---CV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G    C+ Y  L++G    G  + A  + +++ + G  P++VT   ++  LC NG+
Sbjct: 268 MVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 327

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +FD L+  G KP+  T+ TL++ +  E  L +   L +LMM+  +     I+++
Sbjct: 328 STEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNM 387

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++    K  ++ E   +      +GL  D+V + +V+D     G V  A+  ++ + + G
Sbjct: 388 IMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG 447

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN++ ++ LI GLC   +  +   L  +++ R +    + +++++   CK G++ +  
Sbjct: 448 LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAK 507

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+D M++ G++P+    + LI+G      M +A++     V   + P+   +NT+++G 
Sbjct: 508 NLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGY 567

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            +  R  D + L   M    + P ++T+ +L++G+   G   +A  L+ +M+K
Sbjct: 568 SQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 197/429 (45%), Gaps = 32/429 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
             ++  L++      A   F    +   SP++   + +I  L ++   D A+ VF +MV 
Sbjct: 211 TTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMV- 269

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ- 151
                       ++ +      Y+ L+  Y   GK  E++ IF  M   G+   PD+V  
Sbjct: 270 ------------KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGV--EPDVVTY 315

Query: 152 -RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             LM  L  +    +  K+  ++  +G       Y  L++G   +G +     +   +++
Sbjct: 316 TALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMK 375

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G        N I+     + ++  A  +F  +   G  P++V + T+++  C   +++ 
Sbjct: 376 KGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDD 435

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A   +N +    L P++++++ LI GL    +  +  EL    +DRG+ LD + F+++M 
Sbjct: 436 ALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMG 495

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G V  A   +D M+  G  PN  +Y+ LI G C  G++ EA  L G ++   ++P
Sbjct: 496 NLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKP 555

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
           S +TY+++I+G+ ++G++ DG +L   M  +G+ P  V   +L+ GL        FQ+ R
Sbjct: 556 SDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGL--------FQAGR 607

Query: 447 MTLIPNLFI 455
                 L++
Sbjct: 608 TVAAKELYL 616



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 53/299 (17%), Positives = 121/299 (40%), Gaps = 54/299 (18%)

Query: 33  NQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDK 89
            +A  I  +L+K  +   +  +    H   +   + +   L+ ++++  M+ +  H+F+ 
Sbjct: 329 TEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQ-LGHHIFNM 387

Query: 90  MVIQFGKTYN-------FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
           ++  + K          F  + +  L     +Y  +++     G++D+++  F  +   G
Sbjct: 388 IMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG 447

Query: 143 IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIEN 196
             L+P++V    L+  L   +   +  +L   M  +G C+    +  +M  L +KG +  
Sbjct: 448 --LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIE 505

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN--------- 247
           A ++   +++ G  PN  T N ++   C++G++  A  L  V++  G KP+         
Sbjct: 506 AKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIIN 565

Query: 248 --------------------------VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
                                     +VT+  L+    +  +   A +LY  M++ D V
Sbjct: 566 GYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWDTV 624


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 218/425 (51%), Gaps = 14/425 (3%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L+R G +E        +  +G +P++V C  +++  C  G+  NA+ +  +L   G   +
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
             +++ LINA+CK  ++E+A ++ +      + P+   Y  ++  L   G+LK+  ++L 
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             L      DVV  + ++DA      VG+A++ ++ M   G  P+V++Y++LIKG C++G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           RL EA     ++     +  +++++ ++   C  G+  D   L   M+++G  P  V  +
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 428 LLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK---RATDTVKLFMLM 479
           +LIN     GL+G AL       +    PN   FN L+ G C  K   RA + +++ +  
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR 375

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
           G Y   PD++T+ +L+  +   G +  A+++  Q+  +G +P +I+Y+ +I GL K    
Sbjct: 376 GCY---PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 432

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
            + + + + M   G+ PD+     ++  L +E  +  A+K F  L   G++P+   YN+I
Sbjct: 433 ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSI 492

Query: 600 ICGYC 604
           + G C
Sbjct: 493 MMGLC 497



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 229/479 (47%), Gaps = 18/479 (3%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM---RGKGFC 179
           +R G+++E      YM++ G    PD+V    + + +   +G+     R M      G  
Sbjct: 80  IRNGELEEGSRFLEYMTNKGKI--PDVVA-CTALIREFCKIGRTKNATRIMGILEESGAV 136

Query: 180 V----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           +    Y  L+N   + G IE A    R +      PN  T + +L  LC  G++  A  +
Sbjct: 137 IDANSYNVLINAYCKSGEIEEAL---RVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQV 193

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
            D  L     P+VVT + LI+A CKE+ + +A +L+N M      PD++ Y++LI G  K
Sbjct: 194 LDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCK 253

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            GRL E    L      G + DV+  + ++ +    G    A++    ML  G  P+V++
Sbjct: 254 EGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVT 313

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           ++ILI  LCQ+G L +A  +   +      P+  +++ LI GFC    +       + M+
Sbjct: 314 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373

Query: 416 KRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            RG  PD V  ++L+     +G + DA+    Q       P+L  +NT++DG  ++ +A 
Sbjct: 374 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 433

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             V+L   M    +KPD+IT T ++ G++ +G +  AI  F  +   G+ P+   Y++I+
Sbjct: 434 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIM 493

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            GL K +  S+ +     M  NG  P  A Y  L+  +  E   + A KL  +L  RGL
Sbjct: 494 MGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 208/445 (46%), Gaps = 41/445 (9%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK-LCRAMR 174
           + LI  + +IG+   +  I   + + G  +  +    L++    S  + +  + L     
Sbjct: 108 TALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSV 167

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y+ ++  L  +G ++ A  +  + +Q    P++VTC  ++   C    +G A  
Sbjct: 168 APNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMK 227

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF+ +   G KP+VVT++ LI  FCKE +L++A      +       D+I +++++  L 
Sbjct: 228 LFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLC 287

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVV---------------------------------- 320
             GR  +  +LL T L +G    VV                                   
Sbjct: 288 SGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSR 347

Query: 321 -FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            F+ ++  +     + RA++  + M++ G  P++++Y+IL+  LC+ G++ +A  +  Q+
Sbjct: 348 SFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQL 407

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
             +   PSL++Y+++IDG  K GK      L + M  +GLKPD + C+ ++ GL     +
Sbjct: 408 SSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKV 467

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++FF       + PN FI+N++M G C+ ++ +  +   + M     KP   ++T L
Sbjct: 468 HEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTL 527

Query: 495 IRGIASQGSLSSAILLFFQMLKRGL 519
           I+GI  +G    A  L  ++  RGL
Sbjct: 528 IKGITYEGLAEEASKLSNELYSRGL 552



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 136/276 (49%), Gaps = 2/276 (0%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G++    +  + M N G +P+V++ + LI+  C+ GR   A  + G +          +Y
Sbjct: 83  GELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSY 142

Query: 392 SSLIDGFCKSGKLRDGFSLYDN--MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL 449
           + LI+ +CKSG++ +   + D+  +       DAV+CSL   G +  A++   + ++   
Sbjct: 143 NVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKC 202

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            P++     L+D  C+       +KLF  M     KPDV+T+ VLI+G   +G L  AI+
Sbjct: 203 YPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAII 262

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
              ++   G   DVI+++ I+  L  G      + +   M R G  P +  +N+L+N L 
Sbjct: 263 FLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLC 322

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           ++  L  AL +   +   G  P+  ++N +I G+C+
Sbjct: 323 QKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCN 358



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 14/336 (4%)

Query: 101 FRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--L 153
            +LF +  G  GC      Y+ LI+ + + G++DE++     +   G     D++    +
Sbjct: 226 MKLFNEMRGK-GCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGC--QSDVISHNMI 282

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +  L          KL   M  KG       +  L+N L +KG++  A ++   + + G 
Sbjct: 283 LRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGH 342

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PN  + N +++  C    I  A    ++++  G  P++VT++ L+ A CK+ K++ A  
Sbjct: 343 TPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVV 402

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           + + +      P LI Y+ +IDGL K G+ +   ELL     +GLK D++  +SV+    
Sbjct: 403 ILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLS 462

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G V  A++ +  +   G  PN   Y+ ++ GLC+  +   A      ++    +P+  
Sbjct: 463 REGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEA 522

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +Y++LI G    G   +   L + +  RGL   +++
Sbjct: 523 SYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLI 558



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 82/218 (37%), Gaps = 43/218 (19%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           ++ LI+ +     ID ++E    M   G Y  PD+V    L++ L     V     +   
Sbjct: 349 FNPLIQGFCNRKGIDRAIEHLEIMVSRGCY--PDIVTYNILLTALCKDGKVDDAVVILSQ 406

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  KG       Y  +++GLL+ G  E A  +  ++  +G  P+++TC  ++  L   G+
Sbjct: 407 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 466

Query: 229 IGNASSLFDVLLLVGPKPNV-----------------------------------VTFST 253
           +  A   F  L   G KPN                                     +++T
Sbjct: 467 VHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTT 526

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           LI     E   E+A +L N +    LV   +I  +  D
Sbjct: 527 LIKGITYEGLAEEASKLSNELYSRGLVKKSLIVKVSQD 564


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 234/453 (51%), Gaps = 11/453 (2%)

Query: 165 QYYKLCRAMRGKGF--CVYEFLM--NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           + Y+LCR MR  G      EF M   GLL   + ++A  + +++   G +P+  T N ++
Sbjct: 335 KAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILI 393

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC   +I  A +L++ +   G KP +VT+ +L+  +C    +++A +LY  M      
Sbjct: 394 HWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFT 453

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+++ Y+ L+ G        +   LL      G+  +   ++++++    +G V    + 
Sbjct: 454 PNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEM 513

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
             R    GF+P  ++Y+ +I G  + G +  A  ++ Q+  + + P+++TY+S IDG+CK
Sbjct: 514 LKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFI 455
           +        + +++  +GL+PD    + LI      G M  AL+     ++  L+PN+ +
Sbjct: 574 TSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISV 633

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N+ + G   LK   + ++L+  M    I  D  T+T LI G +  G+++ A+ L+ +M+
Sbjct: 634 YNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMV 693

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            +G  PD IT++A+ HGL +  +I     +   M R  + P++ +YN+L+N  ++   L 
Sbjct: 694 AKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQ 753

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            A +L  ++ +R + PD  TY+ I+ G  SL S
Sbjct: 754 EAFRLHDEMLERKIMPDDTTYD-ILVGMKSLGS 785



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 195/398 (48%), Gaps = 9/398 (2%)

Query: 219 ILKRLCI-NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           ++ R C   G   +A  LFD +     +P+    S  I + CK     +A  +   M + 
Sbjct: 182 VVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDA 241

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
             VP    ++ ++D L K GR++E   +    L  G K+ VV+ +++M  Y    +V +A
Sbjct: 242 GFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKA 301

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +  ++  L  G +P  ++Y++LI+G  ++G   +A  L  Q+    L PS   ++ +I G
Sbjct: 302 LDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKG 361

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
                  +D  SL+  M   G+ PDA   ++LI+ L     + +AL  + +     + P 
Sbjct: 362 LLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPY 420

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  +++L+   C      + VKL+  M      P+V+T+T L++G  ++ +   A  L  
Sbjct: 421 IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLA 480

Query: 513 QMLKRGLTPDVITYSAIIHGL-FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
           +M + G++ +  TY+ +I+GL   G+   VG  M K  E  G  P    YN ++N  IK 
Sbjct: 481 EMKQNGVSCNDYTYNTLINGLCVVGRVCEVG-EMLKRFETEGFVPTAMTYNSIINGFIKA 539

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             + +A  ++ Q+  +G+ P+I+TY + I GYC  + C
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCC 577



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 169/320 (52%), Gaps = 4/320 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ ++     D++  + A M   G+  +      L++ L     V +  ++ +   
Sbjct: 459 YTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFE 518

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y  ++NG ++ G++ +AF +++Q+  +G  PNIVT    +   C      
Sbjct: 519 TEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCD 578

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + + +   G +P++  +++LI  FC+E  +  A Q+  LM++  L+P++ +Y+  I
Sbjct: 579 LALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G      ++E   L    +  G+ LD   +++++D +   G+V  A++ Y  M+  G +
Sbjct: 639 TGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNI 698

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ I+++ L  GLC+ G + +A  L  ++    + P++L Y+ LI+G+ ++GKL++ F L
Sbjct: 699 PDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRL 758

Query: 411 YDNMIKRGLKPDAVVCSLLI 430
           +D M++R + PD     +L+
Sbjct: 759 HDEMLERKIMPDDTTYDILV 778



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 6/297 (2%)

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           +G  LD  +F  VM A    G    AV+ +D M      P+    S+ I  LC+      
Sbjct: 171 KGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANR 230

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  +  ++      P   T++S++D   K G++ +   + D ++  G K   V+ + L++
Sbjct: 231 ALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMH 290

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           G      +  AL  F +++R  L+P    +  L+ GC          +L   M  + + P
Sbjct: 291 GYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLP 350

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
                 ++I+G+ +      A+ LF +M   G+ PD  TY+ +IH L + + I   L+++
Sbjct: 351 STNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLW 409

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           + M   GV P I  Y+ LL        +D A+KL+ ++  +G  P+++TY T++ G+
Sbjct: 410 EKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 246/532 (46%), Gaps = 45/532 (8%)

Query: 98  YNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           Y F ++ R SL      Y+ LI+ Y R G+ DE+  +   M   G+  S      L++  
Sbjct: 355 YIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGY 414

Query: 158 VDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
              + +G    L + +R +   +    Y  L++G  + G +  A  + + ++  G  P++
Sbjct: 415 CKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDV 474

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           +T + ++  +C  G I     +   +   G  PN V ++TL+  FCK    ++A + +  
Sbjct: 475 ITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVD 534

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           +    LV + +I++ L+   ++ G + E  +         +  DV  F+ ++D+Y   G+
Sbjct: 535 IYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGN 594

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV----------------------- 370
           V  A   YD M+  G+ P++ +Y  L++GLCQ G LV                       
Sbjct: 595 VLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNT 654

Query: 371 ------------EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
                       EA  L  +++ R + P   TY+ L+DGFCK GK+     L   M+++G
Sbjct: 655 LLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKG 714

Query: 419 LKPDAVVCSLLINGLMGD----ALRFFFQSV--RMTLIPNLFIFNTLMDGCCRLKRATDT 472
           L PD +  + L+NGL+ +    A  + FQ +  +  L  +   +N++M+G  +  +  + 
Sbjct: 715 LVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEI 774

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            +L   M    + P   ++ +L+ G   +G LS  + L+  M+K G+ PD +TY  +I G
Sbjct: 775 ERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFG 834

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           L +   I + +   + M   GV PD   +++L+    ++  +  AL+LF  +
Sbjct: 835 LCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYM 886



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 253/523 (48%), Gaps = 55/523 (10%)

Query: 100  FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
            F  ++R  L      ++ L+ ++ R G I E+ +   YMS M I  S D+     +C++D
Sbjct: 532  FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKI--SFDVAS--FNCIID 587

Query: 160  SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            S                 +C          ++G +  AF ++  +++ G+ P+I T   +
Sbjct: 588  S-----------------YC----------QRGNVLEAFSVYDNMVRHGWPPDICTYGSL 620

Query: 220  LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
            L+ LC  G +  A      LL      +  T +TL+   CK   L++A  L   M+  ++
Sbjct: 621  LRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNI 680

Query: 280  VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            +PD   Y+IL+DG  K G++     LL   L++GL  D + ++ +++  V  G V  A  
Sbjct: 681  LPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASY 740

Query: 340  TYDRML-NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             +  ++   G   + I+Y+ ++ G  + G++ E   L   +    + PS  +Y+ L+ G+
Sbjct: 741  MFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGY 800

Query: 399  CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNL 453
             K G+L     LY +M+K G+KPD V   LLI      GL+  A++F  + V   + P+ 
Sbjct: 801  IKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDN 860

Query: 454  FIFNTLMDGCCRLKRATDTVKLFMLM-------GMYNIK---------PDVITHTVLIRG 497
              F+ L+       + ++ ++LF  M       G + +K         P  +  + ++RG
Sbjct: 861  LAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRG 920

Query: 498  IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
            +   G +  AI++F  +++ G+ P + T++ ++HGL K   I    H+ +LME  G+  D
Sbjct: 921  LCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVD 980

Query: 558  IAIYNVLLNMLI-KECNLDAALKLFGQLTDRGLEPDIITYNTI 599
            +  YNVL+  L  K+C  D AL L+ ++  +GL P+I TY T+
Sbjct: 981  VVTYNVLITGLCNKKCICD-ALDLYEEMKSKGLLPNITTYITL 1022



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/583 (24%), Positives = 254/583 (43%), Gaps = 51/583 (8%)

Query: 71  IHVLLQSDMRDVASHVFDKMVIQ-FGKTYNFFRLFR-----DSLGDFGCDYSFLIENYVR 124
           +H+L+Q+ M   A  V   + +  F  +  F  L R     D    F  D   L+  YV+
Sbjct: 115 VHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVD--LLVNAYVK 172

Query: 125 IGKIDESVEIFAYMSDMG-------------------------IYLSPDLVQR----LMS 155
            GK+ ++     +M + G                         ++L   L ++    + +
Sbjct: 173 EGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTT 232

Query: 156 CLVDSNSVGQYYKLCRAM---------RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
           C +  NS+    KL +A          R      Y  ++N  ++KG  ++A  +   + +
Sbjct: 233 CNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEK 292

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G   ++ T N ++ +LC   +   A  L   +  V   P+  +++TLI+ F  E K+  
Sbjct: 293 NGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINL 352

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  ++N M+   L P +  Y+ LIDG  + GR  E   +L      G++   + +S++++
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLN 412

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y     +G A+     + +     N   Y+ILI G CQ G + +A  +   +L   ++P
Sbjct: 413 GYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDP 472

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFF 441
            ++TYS+LI+G CK G + +   +   M K G+ P+ V+ + L+      G   +AL++F
Sbjct: 473 DVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYF 532

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
               R  L+ N  I N L+    R     +  +    M    I  DV +   +I     +
Sbjct: 533 VDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQR 592

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G++  A  ++  M++ G  PD+ TY +++ GL +G ++         +     A D    
Sbjct: 593 GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 652

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N LL  + K   LD AL L  ++  R + PD  TY  ++ G+C
Sbjct: 653 NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFC 695



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/562 (22%), Positives = 250/562 (44%), Gaps = 66/562 (11%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
            Y+ LI+ + ++G++ ++ +I   M   GI   PD++    L++ +     + +  ++   
Sbjct: 442  YTILIDGFCQLGEVSKAKQILKCMLADGI--DPDVITYSALINGMCKMGMIHETKEILSR 499

Query: 173  MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            M+  G      +Y  L+    + G  + A      + + G V N V  N +L      G 
Sbjct: 500  MQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGM 559

Query: 229  IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            I  A      +  +    +V +F+ +I+++C+   + +AF +Y+ M+     PD+  Y  
Sbjct: 560  IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGS 619

Query: 289  LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            L+ GL + G L +  E ++  L++   +D    ++++      G +  A+   ++M+   
Sbjct: 620  LLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 679

Query: 349  FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             LP+  +Y+IL+ G C++G++V A  L   +L + L P  + Y+ L++G    G+++   
Sbjct: 680  ILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAAS 739

Query: 409  SLYDNMI-KRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             ++  +I K GL  D +  + ++NG +      +  R         + P+   +N LM G
Sbjct: 740  YMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG 799

Query: 463  CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG-------------------- 502
              +  + + T+ L+  M    IKPD +T+ +LI G+   G                    
Sbjct: 800  YIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPD 859

Query: 503  ---------------SLSSAILLFFQM-----------LKR-----GLTPDVITYSAIIH 531
                            +S+A+ LF  M           LK      G+ P  +  S+I+ 
Sbjct: 860  NLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVR 919

Query: 532  GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            GL K   +   + +F  + R G+ P IA +  L++ L KE  +D A  L   +   GL+ 
Sbjct: 920  GLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKV 979

Query: 592  DIITYNTIICGYCSLNSCLIDG 613
            D++TYN +I G C+   C+ D 
Sbjct: 980  DVVTYNVLITGLCN-KKCICDA 1000



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 207/439 (47%), Gaps = 16/439 (3%)

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           + L+N  +++G + +A      + + GF  ++ +CN IL     N  +G   S +  L L
Sbjct: 164 DLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNIL-----NALVGINKSEYVWLFL 218

Query: 242 VGP-----KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
                     +V T + ++N+ C + KL KA  +   M    L P+ + Y+ +++   K 
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKK 277

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GR K    +L      G++ D+  ++ ++D    +    RA     RM      P+  SY
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI G   +G++  A  +F Q+L + L+PS+ TY++LIDG+C++G+  +   +   M  
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G++P  +  S L+NG      +G AL         ++  N  ++  L+DG C+L   + 
Sbjct: 398 TGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSK 457

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             ++   M    I PDVIT++ LI G+   G +     +  +M K G+ P+ + Y+ ++ 
Sbjct: 458 AKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVF 517

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
              K  +    L  F  + R+G+  +  I+N LL    +E  +  A +    ++   +  
Sbjct: 518 YFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISF 577

Query: 592 DIITYNTIICGYCSLNSCL 610
           D+ ++N II  YC   + L
Sbjct: 578 DVASFNCIIDSYCQRGNVL 596



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 147/325 (45%), Gaps = 31/325 (9%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +L    +L++   K G++ +    +    + G K  +   +++++A VGI          
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
              L+  F  +V + +I++  LC QG+L +A  +  ++   RL P+ +TY+++++ + K 
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKK 277

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
           G+ +    + D+M K G++ D                              L+ +N ++D
Sbjct: 278 GRCKSALRILDDMEKNGIEAD------------------------------LYTYNIMID 307

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C+LKR+     L   M   N+ PD  ++  LI G   +G ++ AI +F QML++ L P
Sbjct: 308 KLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKP 367

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            V TY+A+I G  +         +   M+  GV P    Y+ LLN   K   L  AL L 
Sbjct: 368 SVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLI 427

Query: 582 GQLTDRGLEPDIITYNTIICGYCSL 606
             L  R +  +   Y  +I G+C L
Sbjct: 428 KYLRSRSISINRTMYTILIDGFCQL 452



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 149/345 (43%), Gaps = 32/345 (9%)

Query: 70   LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
            L++ L+       AS++F +++ + G       L+ D +      Y+ ++  Y++ G+I+
Sbjct: 725  LLNGLVNEGQVKAASYMFQEIICKEG-------LYADCIA-----YNSMMNGYLKGGQIN 772

Query: 130  ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLM 185
            E   +   M +  +Y S      LM   +    + +   L R M  +G       Y  L+
Sbjct: 773  EIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLI 832

Query: 186  NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP- 244
             GL   G+IE A     +++  G  P+ +  + ++K      ++ NA  LF  +  VG  
Sbjct: 833  FGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDI 892

Query: 245  ---------------KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
                            P+ V  S+++   CK  K+E+A  +++ +M   +VP +  ++ L
Sbjct: 893  DGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTL 952

Query: 290  IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
            + GL K  ++ +   L       GLK+DVV ++ ++        +  A+  Y+ M + G 
Sbjct: 953  MHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGL 1012

Query: 350  LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
            LPN+ +Y  L   +   G + +   L   +  R + PS     SL
Sbjct: 1013 LPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESL 1057


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 256/534 (47%), Gaps = 18/534 (3%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           R+  + +      Y+ L+    +  ++ E+VE+   M ++G+       + L+       
Sbjct: 223 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 282

Query: 162 SVGQYYKLCRAMRGKGFCVYE----FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            +    ++   M   GF   E    F+++ L +K ++E AF +  ++   G VPN+   N
Sbjct: 283 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++ +LC N +  +A  LF  +   G +PN VT++ LI+A CK   +E A  L++ M + 
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            +   +  Y+ LI+G  K G L     LL   +  GL      +S ++      GD+  A
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSA 462

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++ +  M   G   N  +++ LI G C+  ++ EA  LF +++   + P+ +T++ +I+G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
           +C  G +R  F LYD M++ GLKPD      LI+GL     +  A  F         + N
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLN 582

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
            F    L+ G  R  R T+T  L+  M +  +K D+++ T+++     Q     + +LF 
Sbjct: 583 NFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 642

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M ++G+ PD I Y+ +I  L K +N+   L+ +  M  +G +P+   + VL+N L K  
Sbjct: 643 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSG 702

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCS---------LNSCLIDGYFKS 617
            L +A  L  ++    + P+  TYN  +  + +         L+S ++ G+  S
Sbjct: 703 YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS 756



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 253/524 (48%), Gaps = 34/524 (6%)

Query: 102 RLFRDSLG----DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           RLF++  G         Y+ LI    + G I++++ +F  M D GI ++      L++  
Sbjct: 359 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418

Query: 158 VDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
               S+ +   L   M  +G       Y  L+ GL R G + +A  +HR++ +RG   N 
Sbjct: 419 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNN 478

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T   ++   C + ++  A+ LFD ++     PN VTF+ +I  +C    + KAFQLY+ 
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M+EM L PD   Y  LI GL     + + NE +    +    L+    ++++    G+  
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALL---YGLFR 595

Query: 334 VGRAVQTY---DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            GR  +TY   D M   G   +++S++I++    +Q    ++C LF ++  + ++P  + 
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSV 445
           Y+ +ID   K   +    + +D M+  G  P+ V  ++LIN     G +G A     + +
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 446 RMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
              ++PN F +N  +D       +++A D +   ML G       +++  +LI+G+   G
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHL---ASIVSFNILIKGLCKAG 771

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  AI L  ++ + G +PD I+YS IIH L K  +I+    ++  M   G+ PD+  YN
Sbjct: 772 KIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN 831

Query: 563 VLLNMLIKECNL----DAALKLFGQLTDRGLEPDIITYNTIICG 602
           +     I+ CN+    D AL ++  +   G++P+  TY  ++ G
Sbjct: 832 I----FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 216/467 (46%), Gaps = 41/467 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++ L +    ++A  + +++  RG  PN VT   ++  LC  G I +A  LFD +
Sbjct: 340 AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKM 399

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G K  V  +++LIN +CK+  L++A  L + M++  L P    YS LI GL + G L
Sbjct: 400 RDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDL 459

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               EL     +RG+  +   F+++++ +     +  A + +D+M++   +PN ++++++
Sbjct: 460 SSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVM 519

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC-------------------- 399
           I+G C  G + +A  L+ Q++   L+P   TY SLI G C                    
Sbjct: 520 IEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYA 579

Query: 400 ---------------KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR----- 439
                          + G+  + + L+D M  RG+K D V  ++++   +    +     
Sbjct: 580 VLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F +     + P+   +  ++D   + +     +  +  M +    P+ +THTVLI  + 
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLC 699

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G L SA LL  +ML   + P+  TY+  +       ++     +   M +  +A  I 
Sbjct: 700 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIV 758

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +N+L+  L K   +  A+ L  ++T+ G  PD I+Y+TII   C +
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKM 805



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 202/405 (49%), Gaps = 5/405 (1%)

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           +  G   N  T ++IL  L    Q   A  LFD +L  G   +   ++  I A+C+   L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           + A  L   M    +    + Y++L+ GL K  R++E  E+    ++ G+  D V + ++
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +  +  + ++  A++    M+  GF+P+  + S +I  L ++  + EA  L  ++    +
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALR 439
            P++  Y++LID  CK+ +  D   L+  M  RGL+P+ V  ++LI+     G++ DAL 
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F +     +   ++ +N+L++G C+         L   M    + P   +++ LI G+ 
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G LSSA+ L  +M +RG+  +  T++A+I+G  K K +     +F  M  + V P+  
Sbjct: 455 RNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 514

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +NV++       N+  A +L+ Q+ + GL+PD  TY ++I G C
Sbjct: 515 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 190/408 (46%), Gaps = 35/408 (8%)

Query: 70  LIHVLLQSDMRDVASHVFDKM----VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRI 125
           LI+   +    D A+ +FDKM    VI    T+N                  +IE Y  +
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV-----------------MIEGYCLV 526

Query: 126 GKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
           G I ++ +++  M +MG  L PD    + L+S L  ++ V +  +    +      +  F
Sbjct: 527 GNIRKAFQLYDQMVEMG--LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 584

Query: 184 ----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
               L+ GL R+G     +H+  ++  RG   ++V+   I+           +  LF  +
Sbjct: 585 SLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KP+ + ++ +I+A  KE  + +A   ++ M+     P+ + +++LI+ L K+G L
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYL 704

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L    L   +  +   ++  +D +   GD+ +A   +  ML G  L +++S++IL
Sbjct: 705 GSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG-HLASIVSFNIL 763

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKGLC+ G++ EA  L  ++      P  ++YS++I   CK G +   F L++ M+ +GL
Sbjct: 764 IKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           KPD V  ++ I     +G    AL  +   +R  + PN   +  L+ G
Sbjct: 824 KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 59/113 (52%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +  L+ GL + G I+ A  + R++ + GF P+ ++ + I+  LC  G I  A  L++ +L
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             G KP+VV ++  I       + +KA  +Y  M+   + P+   Y  L+ G+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 49/99 (49%)

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF +ML+ G+  D   Y+A I    + +N+     +   ME  GV      YNVL+  L 
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLC 244

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           K   +  A+++   + + G+  D +TY T++ G+C +  
Sbjct: 245 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 240/494 (48%), Gaps = 35/494 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYM-SDMGIYLSPDLVQRL-MSCLVDSNSVGQYYKLCRA 172
           Y+ L++++ R G++D++ ++   M +  G  L  D+   + ++ L     + +  +L   
Sbjct: 234 YNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDR 293

Query: 173 MR-GKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           MR  K    + F  L+ G   +G +E A  +  ++   G VP +VT N I+  +  +G +
Sbjct: 294 MRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNV 353

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A   F  +  +G  P+++T+++LIN +CK   L++A  L+  +    L P ++ Y+IL
Sbjct: 354 EAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNIL 413

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           +DG  + G L+E        +++G + DV  ++ +M+    + ++    + +D ML+ G 
Sbjct: 414 LDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGL 473

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+  +Y+  I      G   EA  L   ++ R +    +TY+  +DG CKSG L+D + 
Sbjct: 474 QPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYV 533

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           L+  M+  GL+PD +  + LI+                                C   R 
Sbjct: 534 LWMKMVSDGLQPDCITYTCLIHAH------------------------------CERGRL 563

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +   +F  M +  + P  +T+TV I     +G+L SA   F +ML+ G+ P+ +TY+ +
Sbjct: 564 REARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVL 623

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           IH L +    ++    F  M   G++P+   Y +L++   KE N + A++L+ ++   G+
Sbjct: 624 IHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGI 683

Query: 590 EPDIITYNTIICGY 603
            PD  T+N +  G+
Sbjct: 684 HPDHCTHNALFKGF 697



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 210/414 (50%), Gaps = 8/414 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV--GPKPNVVTFSTLINA 257
           ++ +++Q G  P+IVT N +L      G++  A+ L   +     G  P+ VT++ +IN 
Sbjct: 218 VYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVING 277

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
             ++ +LEKA QL +  M M        ++ LI G F  G +++   L L   + G+   
Sbjct: 278 LARKGELEKAAQLVD-RMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPT 336

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           VV +++++      G+V  A   +  M   G LP++I+Y+ LI G C+ G L EA  LFG
Sbjct: 337 VVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFG 396

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
            +    L PS+LTY+ L+DG+C+ G L +       M+++G +PD    ++L+NG     
Sbjct: 397 DLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVR 456

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            +     FF + +   L P+ F +NT +     L   ++  +L  +M    I  D +T+ 
Sbjct: 457 NLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYN 516

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           + + G+   G+L  A +L+ +M+  GL PD ITY+ +IH   +   +     +F  M  +
Sbjct: 517 IFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVS 576

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           G+ P    Y V ++   +  NL +A   F ++ + G+ P+ +TYN +I   C +
Sbjct: 577 GLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRM 630



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 220/445 (49%), Gaps = 14/445 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    R G+++++ ++   M  M    S      L++      SV +   L   M 
Sbjct: 271 YNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLITGYFARGSVEKAGALQLEME 329

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  +++G+ R G +E A     ++   G +P+++T N ++   C  G + 
Sbjct: 330 NEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLK 389

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF  L   G  P+V+T++ L++ +C+   LE+A +    M+E    PD+  Y+IL+
Sbjct: 390 EALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILM 449

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G  K   L    E     L +GL+ D   +++ + A + +G    A Q  + M++ G  
Sbjct: 450 NGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGIS 509

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            + ++Y+I + GLC+ G L +A  L+ +++   L+P  +TY+ LI   C+ G+LR+   +
Sbjct: 510 SDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDI 569

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +D M+  GL P AV  ++ I+     G +  A  +F + +   + PN   +N L+   CR
Sbjct: 570 FDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCR 629

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           + R     + F  M    + P+  T+T+LI G   +G+   AI L+ +M + G+ PD  T
Sbjct: 630 MGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCT 689

Query: 526 YSAIIHGLFKGKNISVGLHMFKLME 550
           ++A    LFKG +     H  + ME
Sbjct: 690 HNA----LFKGFDEGQSKHAIQYME 710



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 139/269 (51%), Gaps = 6/269 (2%)

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            +  M + G  P +   +++++ L  + R  +   ++ ++L   +EPS++TY++L+D F 
Sbjct: 183 AFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFF 242

Query: 400 KSGKLRDGFSLYDNMIKR--GLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNL 453
           + G++     L   M  R  G  P  V  +++INGL      +        +RM+   + 
Sbjct: 243 REGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASA 302

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
           F FN L+ G            L + M    I P V+T+  +I G+   G++ +A + F +
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M   GL PD+ITY+++I+G  K  N+   L +F  ++R G+AP +  YN+LL+   +  +
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L+ A +   ++ ++G +PD+ TY  ++ G
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNG 451



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 8/275 (2%)

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR--LEPSLLTYSSLIDGF 398
           Y  ML  G  P++++Y+ L+    ++GR+ +A  L  ++  R     PS +TY+ +I+G 
Sbjct: 219 YAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGL 278

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNL 453
            + G+L     L D M +   K  A   + LI G         A     +     ++P +
Sbjct: 279 ARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTV 337

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +NT++ G  R          F+ M    + PD+IT+  LI G    G+L  A+ LF  
Sbjct: 338 VTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGD 397

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           + + GL P V+TY+ ++ G  +  ++       + M   G  PD++ Y +L+N   K  N
Sbjct: 398 LKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRN 457

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           L    + F ++  +GL+PD   YNT I     L S
Sbjct: 458 LAMVREFFDEMLSKGLQPDCFAYNTRISAELILGS 492



 Score = 42.7 bits (99), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           L  F+ M  +GV P I   N++L  L  E   D    ++ ++   G+EP I+TYNT++
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLL 238


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/586 (25%), Positives = 278/586 (47%), Gaps = 30/586 (5%)

Query: 46  NNPTPAIQFFKWT-------HNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ----- 93
            +P  A +FFKW+       H+  S   +A   H+L  + M   A+ V  +MV+      
Sbjct: 120 EDPKLAFKFFKWSMTRNGFKHSVESYCIVA---HILFCARMYYDANSVLKEMVLSKADCD 176

Query: 94  -FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
            F   ++   +     G F   +S LI+    +G ++E+++ F+ M    ++        
Sbjct: 177 VFDVLWSTRNVCVPGFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSCNG 232

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+             +  + M G G       Y  +++ + ++G +E A  +  ++  RG
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
            VP+ VT N ++      G++ +    F+ +  +  +P+V+T++ LIN FCK  KL    
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           + Y  M    L P+++ YS L+D   K G +++  +  +     GL  +   ++S++DA 
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             IG++  A +  + ML  G   NV++Y+ LI GLC   R+ EA  LFG++    + P+L
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQS 444
            +Y++LI GF K+  +     L + +  RG+KPD ++    I GL      +A +     
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532

Query: 445 VRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
           ++   I  N  I+ TLMD   +    T+ + L   M   +I+  V+T  VLI G+     
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592

Query: 504 LSSAILLFFQMLKR-GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           +S A+  F ++    GL  +   ++A+I GL K   +     +F+ M + G+ PD   Y 
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            L++   K+ N+  AL L  ++ + G++ D++ Y +++ G    N 
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 205/423 (48%), Gaps = 16/423 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ + ++G++D++V  F  M DM     PD++    L++C      +    +  R 
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCC--EPDVITYNALINCFCKFGKLPIGLEFYRE 357

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+G G       Y  L++   ++G+++ A   +  + + G VPN  T   ++   C  G 
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  L + +L VG + NVVT++ LI+  C   ++++A +L+  M    ++P+L  Y+ 
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G  KA  +    ELL     RG+K D++++ + +     +  +  A    + M   G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N + Y+ L+    + G   E   L  ++    +E +++T+  LIDG CK+ KL    
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN-KLVSKA 596

Query: 409 SLYDNMIKR--GLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMD 461
             Y N I    GL+ +A + + +I+GL  D     A   F Q V+  L+P+   + +LMD
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G  +     + + L   M    +K D++ +T L+ G++    L  A     +M+  G+ P
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716

Query: 522 DVI 524
           D +
Sbjct: 717 DEV 719



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 156/324 (48%), Gaps = 19/324 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   +IG + ++  +   M  +G+  +      L+  L D+  + +  +L   M 
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++G ++   ++ A  +  ++  RG  P+++     +  LC   +I 
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + + +   G K N + ++TL++A+ K     +   L + M E+D+   ++ + +LI
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584

Query: 291 DGLFKAGRLKEGNELLLTALDR--------GLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           DGL K       N+L+  A+D         GL+ +  +F++++D       V  A   ++
Sbjct: 585 DGLCK-------NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           +M+  G +P+  +Y+ L+ G  +QG ++EA  L  ++    ++  LL Y+SL+ G     
Sbjct: 638 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCN 697

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVC 426
           +L+   S  + MI  G+ PD V+C
Sbjct: 698 QLQKARSFLEEMIGEGIHPDEVLC 721



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/310 (21%), Positives = 137/310 (44%), Gaps = 5/310 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+      ++ E+ E+F  M   G+  +      L+   V + ++ +  +L   ++
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G+G      +Y   + GL     IE A  +  ++ + G   N +    ++     +G   
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN-LMMEMDLVPDLIIYSIL 289
               L D +  +  +  VVTF  LI+  CK   + KA   +N +  +  L  +  I++ +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDGL K  +++    L    + +GL  D   ++S+MD     G+V  A+   D+M   G 
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             ++++Y+ L+ GL    +L +A     +++   + P  +   S++    + G + +   
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739

Query: 410 LYDNMIKRGL 419
           L   ++K  L
Sbjct: 740 LQSYLMKHQL 749


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 234/462 (50%), Gaps = 35/462 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++ G  +KG+++  F +  ++++RG   + +TCN ++K  C  G +  A  +   L
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G   +V+  +TLI+ +C+   + +A +L       D+  D++ Y+ L+    K G L
Sbjct: 224 VDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDL 283

Query: 300 KEG----NELLLTALD---------------RGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
                  NE+L    D               + L+  +V +++++ AY     V  +   
Sbjct: 284 TRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSL 343

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           Y +M+  G +P+V++ S ++ G C+ G+L EA  LF ++    L+P+ ++Y+++I+   K
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFK 403

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFI 455
           SG++ + F+L   M+ RG+  D V C+ +++GL       +A   F   +++ L PN   
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           ++ L+DG C+L +      +   M   ++ P+VIT + +I G A +G LS A+ +  +M+
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           +R + P+ I Y+ +I G FK     V     K M+   +     I+++LLN L +   +D
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 583

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
            A  L   +  +G++PDI+ Y           + LIDGYFK 
Sbjct: 584 EARSLIIDMYSKGIDPDIVNY-----------ASLIDGYFKE 614



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 254/539 (47%), Gaps = 52/539 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  Y +   ++ES  ++  M   GI   PD+V    ++        + +   L R 
Sbjct: 324 YTTLIAAYCKFVGVEESHSLYKKMIMNGIM--PDVVTCSSILYGFCRHGKLTEAAVLFRE 381

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  ++N L + G +  AF++  Q++ RG   +IVTC  ++  L   G+
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +F+ +L +   PN VT+S L++ +CK  K+E A  +   M +  + P++I +S 
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+G  K G L +  ++L   + R +  + +V++ ++D Y   G+   A      M +  
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRR 561

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              + + + IL+  L + GR+ EA  L   +  + ++P ++ Y+SLIDG+ K G      
Sbjct: 562 LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAAL 621

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           S+   M ++ ++ D V  + LI GL+     D      + + + L P+   +NT+++  C
Sbjct: 622 SIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYC 681

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF------------ 512
              +  D + +   M  Y I P+ +T+ +LI G+   G + + I   F            
Sbjct: 682 IKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKAD 741

Query: 513 ------------------------QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
                                   +M+KRG++ D++TY+A+I G   G ++   L  +  
Sbjct: 742 KILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQ 801

Query: 549 MERNGVAPDIAIYNVLL----NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           M  +G+AP+I  YN LL    N  + E  ++   KL  ++ +RGL P+  TY+ ++ GY
Sbjct: 802 MFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY 860



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 212/403 (52%), Gaps = 6/403 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +   P +VT   ++   C    +  + SL+  +++ G  P+VVT S+++  FC+  KL +
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  L+  M EM L P+ + Y+ +I+ LFK+GR+ E   L    + RG+  D+V  ++VMD
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               +G    A + ++ +L     PN ++YS L+ G C+ G++  A  +  ++    + P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFF 442
           +++T+SS+I+G+ K G L     +   M++R + P+ +V ++LI+G       D    F 
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 554

Query: 443 QSVR-MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
           + ++   L  +  IF+ L++   R+ R  +   L + M    I PD++ +  LI G   +
Sbjct: 555 KEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKE 614

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G+  +A+ +  +M ++ +  DV+ Y+A+I GL +           +++E  G+APD   Y
Sbjct: 615 GNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIEL-GLAPDCITY 673

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N ++N    +   + AL +  ++   G+ P+ +TYN +I G C
Sbjct: 674 NTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLC 716



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 212/436 (48%), Gaps = 32/436 (7%)

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL------------ 240
           +IEN++    ++       +IVT N +LK  C  G +  A SLF+ +L            
Sbjct: 254 LIENSWRSDVKI-------DIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNN 306

Query: 241 -------LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
                  +   +P +VT++TLI A+CK   +E++  LY  M+   ++PD++  S ++ G 
Sbjct: 307 DVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGF 366

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G+L E   L     + GL  + V +++++++    G V  A     +M+  G   ++
Sbjct: 367 CRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDI 426

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++ + ++ GL + G+  EA  +F  +L   L P+ +TYS+L+DG+CK GK+     +   
Sbjct: 427 VTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQK 486

Query: 414 MIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M K  + P+ +  S +IN     G++  A+    + V+  ++PN  ++  L+DG  +   
Sbjct: 487 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 546

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                     M    ++   +   +L+  +   G +  A  L   M  +G+ PD++ Y++
Sbjct: 547 QDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I G FK  N    L + + M+   +  D+  YN L+  L++    D    +  ++ + G
Sbjct: 607 LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELG 665

Query: 589 LEPDIITYNTIICGYC 604
           L PD ITYNTII  YC
Sbjct: 666 LAPDCITYNTIINTYC 681



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 144/578 (24%), Positives = 259/578 (44%), Gaps = 89/578 (15%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           S ++  + R GK+ E+  +F  M +MG  L P+ V    +++ L  S  V + + L   M
Sbjct: 360 SSILYGFCRHGKLTEAAVLFREMYEMG--LDPNHVSYATIINSLFKSGRVMEAFNLQSQM 417

Query: 174 --RGKGFCVYE--FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             RG  F +     +M+GL + G  + A  +   +++    PN VT + +L   C  G++
Sbjct: 418 VVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKM 477

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  +   +      PNV+TFS++IN + K+  L KA  +   M++ +++P+ I+Y+IL
Sbjct: 478 ELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAIL 537

Query: 290 IDGLFKAG---------------RLKEGN---ELLLTALDR-----------------GL 314
           IDG FKAG               RL+E N   ++LL  L R                 G+
Sbjct: 538 IDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI 597

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             D+V ++S++D Y   G+   A+     M       +V++Y+ LIKGL + G+  +   
Sbjct: 598 DPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRY 656

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
           +  +++   L P  +TY+++I+ +C  GK  D   + + M   G+ P+AV  ++LI GL 
Sbjct: 657 VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLC 716

Query: 435 GDAL-------RFFFQS----------------------------------VRMTLIPNL 453
                      +F  ++                                  V+  +  +L
Sbjct: 717 KTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADL 776

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG----SLSSAIL 509
             +N L+ G C        +K +  M +  I P++ T+  L+ G+++ G     +     
Sbjct: 777 VTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEK 836

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           L  +M +RGL P+  TY  ++ G  +  N    + +   M   G  P +  YNVL++   
Sbjct: 837 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 896

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           K   +  A +L   L  +G  P+  TY+ + CG+ +L+
Sbjct: 897 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLS 934



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 227/476 (47%), Gaps = 47/476 (9%)

Query: 173 MRGKGFCVYEFLMNGLLRK----GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR  G        N LL +    G++     M+  ++  G VP++ + N ++  LC  G 
Sbjct: 85  MRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGD 144

Query: 229 IGNASSLF---DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           +  A       DV+ +     + VT++T+I  FC++  +++ F L + M++  L  D I 
Sbjct: 145 LDLALGYLRNNDVVDI-----DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSIT 199

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
            +IL+ G  + G ++    ++   +D G+  DV+  ++++D Y     + +A +  +   
Sbjct: 200 CNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSW 259

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL-------------------IRRLEP 386
                 ++++Y+ L+K  C+ G L  A  LF ++L                   I+ L+P
Sbjct: 260 RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQP 319

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFF 441
           +L+TY++LI  +CK   + +  SLY  MI  G+ PD V CS ++     +G + +A   F
Sbjct: 320 TLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLF 379

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +   M L PN   + T+++   +  R  +   L   M +  I  D++T T ++ G+   
Sbjct: 380 REMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKV 439

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A  +F  +LK  L P+ +TYSA++ G  K   + +   + + ME+  V P++  +
Sbjct: 440 GKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITF 499

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
           + ++N   K+  L  A+ +  ++  R + P+ I Y           + LIDGYFK+
Sbjct: 500 SSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVY-----------AILIDGYFKA 544



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 162/374 (43%), Gaps = 61/374 (16%)

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           F TLI  +    +   A   ++ M  + LVP L  ++ L+     +G + +         
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQ--------- 112

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
              +KL                        Y  ML  G +P+V S ++L+  LC+ G L 
Sbjct: 113 ---VKL-----------------------MYSDMLFCGVVPDVFSVNVLVHSLCKVGDLD 146

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
            A G      +  ++   +TY+++I GFC+ G +  GF L   M+KRGL  D++ C++L+
Sbjct: 147 LALGYLRNNDVVDIDN--VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILV 204

Query: 431 NGLMGDALRFFFQSVRMTLI-----PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
            G     L  + + V   L+      ++   NTL+DG C     +   +L       ++K
Sbjct: 205 KGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVK 264

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLK-------------------RGLTPDVITY 526
            D++T+  L++     G L+ A  LF ++L                    + L P ++TY
Sbjct: 265 IDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTY 324

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I    K   +     ++K M  NG+ PD+   + +L    +   L  A  LF ++ +
Sbjct: 325 TTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYE 384

Query: 587 RGLEPDIITYNTII 600
            GL+P+ ++Y TII
Sbjct: 385 MGLDPNHVSYATII 398



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 26/273 (9%)

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           +  LI+      R   A   F  +    L P+L  +++L+  F  SG +     +Y +M+
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 416 KRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G+ PD    ++L++ L  +GD   AL  + ++  +  I N+  +NT++ G C+     
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALG-YLRNNDVVDIDNV-TYNTVIWGFCQKGLVD 179

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
               L   M    +  D IT  +L++G    G +  A  + + ++  G+T DVI  + +I
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL------ 584
            G  +   +S    + +   R+ V  DI  YN LL    K  +L  A  LF ++      
Sbjct: 240 DGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKD 299

Query: 585 TDR-------------GLEPDIITYNTIICGYC 604
            DR              L+P ++TY T+I  YC
Sbjct: 300 EDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYC 332


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 235/494 (47%), Gaps = 45/494 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I  +++   +D+++  F  M D G+   P++   L+  LV SN   + +     ++
Sbjct: 96  YESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELK 155

Query: 175 GK-GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
            +  F VY F   G++ KG                               C NG +  + 
Sbjct: 156 ERVKFDVYSF---GIMIKGC------------------------------CENGNLDKSF 182

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L  +L  +G  PNVV ++TLI+  CK   +E+A   ++ M EM LV +   +++LI+GL
Sbjct: 183 QLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGL 242

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
           FK G  K+G +L       GL  ++  ++ +M+ Y G G + RA   +D M   G   NV
Sbjct: 243 FKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANV 302

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ LI G+C++ R+ EA  L  Q+    + P+L+TY++LI GFC  G L    SL D 
Sbjct: 303 VTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQ 362

Query: 414 MIKRGLKPDAVVCSLLINGL--------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +   GL P  V  ++LI G         + D  R   +     + P+      L+D   R
Sbjct: 363 LKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAR---EMEGRGISPSKVTCTVLIDAYVR 419

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           L+      +++  M  + + PDV  + VLI G+  +G++  +  LF  M +  + P  + 
Sbjct: 420 LQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVI 479

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ +IHG  K  N    L + + ME  G+ P++A Y+ ++ +L K+   + A  L  ++ 
Sbjct: 480 YNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMI 539

Query: 586 DRGLEPDIITYNTI 599
           +  L+P     N I
Sbjct: 540 ELQLKPSASILNMI 553



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 195/365 (53%), Gaps = 8/365 (2%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +PN+  F++L+ +  +    EKA+  +N + E  +  D+  + I+I G  + G L +  +
Sbjct: 127 RPNI--FNSLLGSLVRSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQ 183

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           LL    D GL  +VV++++++D     GD+ RA   +D+M   G + N  ++++LI GL 
Sbjct: 184 LLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLF 243

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           ++G   +   LF ++ I  L P+L TY+ L++ +C  GK+   F L+D M +RG++ + V
Sbjct: 244 KKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVV 303

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + LI G+     + +A +   Q  +  + PNL  +NTL+ G C +        L   +
Sbjct: 304 TYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQL 363

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               + P ++T+ +LI G +  G+      L  +M  RG++P  +T + +I    + + +
Sbjct: 364 KSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEM 423

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                ++  ME+ G+ PD+ +Y VL++ L  + N+  + KLF  + +  +EP  + YNT+
Sbjct: 424 EKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTM 483

Query: 600 ICGYC 604
           I GYC
Sbjct: 484 IHGYC 488



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 188/414 (45%), Gaps = 52/414 (12%)

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
           F K + FF   ++ +      +  +I+     G +D+S ++   + DMG  LSP++V  +
Sbjct: 144 FEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMG--LSPNVV--I 199

Query: 154 MSCLVD----SNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVI 205
            + L+D    +  + +       M   G    ++    L+NGL +KG+ ++ F +  ++ 
Sbjct: 200 YTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMK 259

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK-- 263
             G  PN+ T N ++   C  G+I  A  LFD +   G + NVVT++TLI   C+E +  
Sbjct: 260 INGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVW 319

Query: 264 ---------------------------------LEKAFQLYNLMMEMDLVPDLIIYSILI 290
                                            L+KA  L + +    L P L+ Y+ILI
Sbjct: 320 EAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILI 379

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G  KAG  K   +L      RG+    V  + ++DAYV + ++ +A Q Y  M   G +
Sbjct: 380 EGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLV 439

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V  Y +LI GLC +G + E+  LF  +    +EPS + Y+++I G+CK         L
Sbjct: 440 PDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRL 499

Query: 411 YDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
              M  +GL P+    S +I     +G   +A     + + + L P+  I N +
Sbjct: 500 LREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 149/293 (50%), Gaps = 10/293 (3%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG--FLPNVISYSILIKGLCQQGRLVEACGL 375
            +++ S+++A++    + +A+  ++ M++ G  F PN+ + S+L  G   +    E   L
Sbjct: 93  ALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFN-SLL--GSLVRSNCFEKAWL 149

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM- 434
           F   L  R++  + ++  +I G C++G L   F L   +   GL P+ V+ + LI+G   
Sbjct: 150 FFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCK 209

Query: 435 -GDALR---FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            GD  R   FF +   M L+ N + F  L++G  +     D   LF  M +  + P++ T
Sbjct: 210 NGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYT 269

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  L+     +G +  A  LF +M +RG+  +V+TY+ +I G+ + + +     +   M+
Sbjct: 270 YNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMK 329

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           +  V+P++  YN L+       NLD A  L  QL   GL P ++TYN +I GY
Sbjct: 330 KAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGY 382



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 142/300 (47%), Gaps = 37/300 (12%)

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE------PSLL 389
           +A+  ++  +  GF     S S L++ L    +L  A  L  Q+L  ++       PSLL
Sbjct: 20  QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLL 79

Query: 390 T---------------YSSLIDGFCKSGKLRDGFSLYDNMIKRGL--KPDAVVCSLLING 432
                           Y S+I+   KS  L      ++ M+ +GL  +P+      + N 
Sbjct: 80  HHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPN------IFNS 133

Query: 433 LMGDALR--------FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           L+G  +R         FF  ++  +  +++ F  ++ GCC       + +L  L+    +
Sbjct: 134 LLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGL 193

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            P+V+ +T LI G    G +  A L F +M + GL  +  T++ +I+GLFK      G  
Sbjct: 194 SPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFD 253

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +F+ M+ NG+ P++  YN L+N    E  +  A  LF ++ +RG+E +++TYNT+I G C
Sbjct: 254 LFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMC 313



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 12/221 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK----LC 170
           Y+ LI  +  +G +D++  +   +   G  LSP LV    + L++  S    +K    L 
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNG--LSPSLVT--YNILIEGYSKAGNWKGVADLA 395

Query: 171 RAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           R M G+G    +     L++  +R   +E AF ++  + + G VP++     ++  LC+ 
Sbjct: 396 REMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMK 455

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  +S LF  +  +  +P+ V ++T+I+ +CKE    +A +L   M    LVP++  Y
Sbjct: 456 GNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASY 515

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           S +I  L K G+ +E   LL   ++  LK    + + +  A
Sbjct: 516 SSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISKA 556


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 244/552 (44%), Gaps = 52/552 (9%)

Query: 99  NFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
           N   LF D++      YS LI+  ++    D +  +   M   G  + P +    +  + 
Sbjct: 307 NSVGLFADNVA-----YSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMS 361

Query: 159 DSNSVGQYYKLCRAM----RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
              ++ +   L   M       G   Y  L+ G  R+  +   + +  ++ +R  V +  
Sbjct: 362 KEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPY 421

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T    +K +C +G +  A ++   +   G +PNVV ++TLI  F ++++   A ++   M
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            E  + PD   Y+ LI GL KA ++ E    LL  ++ G K D   + + +  Y+  G+ 
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A +    ML  G +PN +  + LI   C++G+++EAC  F  ++ + +     TY+ L
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           ++G  K+GK+ D   ++  M  +G+ PD      LI+G      M  A   F + V+  L
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
             N+ I+N L+ G CR        +L   M      P+ +T+  +I G    G L+ A  
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ 721

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA-------------- 555
           LF +M  +GL PD   Y+ ++ G  +  ++   + +F+  E+   +              
Sbjct: 722 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFK 781

Query: 556 ------------------------PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
                                   P+   YN++++ L KE NL+AA +LF  +    L P
Sbjct: 782 FGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMP 841

Query: 592 DIITYNTIICGY 603
            +ITY +++ GY
Sbjct: 842 TVITYTSLLNGY 853



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 251/510 (49%), Gaps = 19/510 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   ++     G +D +  I   M   G   +  +   L+   +  +  G   ++ + MR
Sbjct: 423 YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482

Query: 175 GKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            +G     FC Y  L+ GL +   ++ A     ++++ GF P+  T    +      G+ 
Sbjct: 483 EQGIAPDTFC-YNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A      +L  G  PN V  + LIN +CK+ K+ +A   +  M+E  ++ D   Y++L
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++GL K G++ +  E+      +G+  DV  + +++D +  +G++ +A   +D M+  G 
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             NVI Y++L+ G C+ G + +A  L  ++  +   P+ +TY ++IDG+CKSG L + F 
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ 721

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL--MGDALRF--FFQSVRMTLIPNLFIFNTLMDGCCR 465
           L+D M  +GL PD+ V + L++G   + D  R    F++       +   FN L++   +
Sbjct: 722 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFK 781

Query: 466 LKRATDTVKLF--MLMGMYNI--KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             +   T  +   ++ G ++   KP+ +T+ ++I  +  +G+L +A  LF  M K  L P
Sbjct: 782 FGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMP 841

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            VITY+++++G  K    S    +F  +   G+ PD  +Y+V++N  +KE     AL L 
Sbjct: 842 TVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLL 901

Query: 582 GQL-----TDRGLEPDIITYNTIICGYCSL 606
            Q+      D G +  I T   ++ G+  +
Sbjct: 902 DQMFAKNAVDDGCKLSISTCRALLSGFAKV 931



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 247/557 (44%), Gaps = 67/557 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           +  LI+ Y+  G +DE+V +F+   D+ + L P L +   L+  L+  N +  ++ + + 
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG 214

Query: 173 M--RGKGFCV--YEFLMNGLLRKGVIE---------------------NAFHMHRQVIQR 207
           M  R   F V  YE L+    R G ++                      A  + + +  +
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCK 274

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF--------- 258
           G VP+  + N ++  LC   ++ +A SL   +  VG   + V +S LI+           
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334

Query: 259 --------------------------CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
                                      KE  +EKA  L++ M+   + P    Y+ LI+G
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
            F+   +++G ELL+    R + +    + + +      GD+  A      M   G  PN
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V+ Y+ LIK   Q+ R  +A  +  ++  + + P    Y+SLI G  K+ K+ +  S   
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514

Query: 413 NMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M++ G KPDA      I+G +       A ++  + +   +IPN  +   L++  C+  
Sbjct: 515 EMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKG 574

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  +    F  M    I  D  T+TVL+ G+   G ++ A  +F +M  +G+ PDV +Y 
Sbjct: 575 KVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYG 634

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I G  K  N+     +F  M + G+  ++ IYN+LL    +   ++ A +L  +++ +
Sbjct: 635 TLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694

Query: 588 GLEPDIITYNTIICGYC 604
           G  P+ +TY TII GYC
Sbjct: 695 GFPPNAVTYCTIIDGYC 711



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 163/375 (43%), Gaps = 56/375 (14%)

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQY 166
           LGD    Y+ L+   V+ GK++++ EIF  M   GI  +PD+       L+D  + +G  
Sbjct: 592 LGD-AKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGI--APDVFS--YGTLIDGFSKLGNM 646

Query: 167 YK-------LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            K       + +A       +Y  L+ G  R G IE A  +  ++  +GF PN VT   I
Sbjct: 647 QKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTI 706

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA------------ 267
           +   C +G +  A  LFD + L G  P+   ++TL++  C+   +E+A            
Sbjct: 707 IDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCA 766

Query: 268 -------------FQLYNLMMEMDLV-------------PDLIIYSILIDGLFKAGRLKE 301
                        F+     +  D++             P+ + Y+I+ID L K G L+ 
Sbjct: 767 SSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEA 826

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             EL        L   V+ ++S+++ Y  +G        +D ++  G  P+ I YS++I 
Sbjct: 827 AKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIIN 886

Query: 362 GLCQQGRLVEACGLFGQVLIRRL-----EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
              ++G   +A  L  Q+  +       + S+ T  +L+ GF K G++     + +NM++
Sbjct: 887 AFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVR 946

Query: 417 RGLKPDAVVCSLLIN 431
               PD+     LIN
Sbjct: 947 LKYIPDSSTVIELIN 961



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 148/384 (38%), Gaps = 63/384 (16%)

Query: 283 LIIYSILIDGLFKAGRLKEG---------------------NELLLTAL----------- 310
           ++++ ILIDG  + G L E                      N LL   L           
Sbjct: 152 VLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDV 211

Query: 311 -----DRGLKLDVVVFSSVMDAYVGIGDV--------------GRAVQTYDRMLN----- 346
                +R +  DV  +  ++ A+   G+V              G A    D  L      
Sbjct: 212 YKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSM 271

Query: 347 --GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
              G +P+  SY++LI GLC+Q RL +A  L  ++    L    + YS LIDG  K    
Sbjct: 272 SCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNA 331

Query: 405 RDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
                L   M+  G   D +     +C +   G M  A   F   +   + P    + +L
Sbjct: 332 DAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASL 391

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           ++G  R K      +L + +   NI     T+   ++G+ S G L  A  +  +M   G 
Sbjct: 392 IEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGC 451

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            P+V+ Y+ +I    +       + + K M   G+APD   YN L+  L K   +D A  
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARS 511

Query: 580 LFGQLTDRGLEPDIITYNTIICGY 603
              ++ + G +PD  TY   I GY
Sbjct: 512 FLLEMVENGFKPDAFTYGAFISGY 535



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 137/331 (41%), Gaps = 64/331 (19%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
           AS +FD+MV Q G T N               Y+ L+  + R G+I+++ E+   MS  G
Sbjct: 649 ASSIFDEMV-QAGLTSNVII------------YNMLLGGFCRSGEIEKAKELLDEMSGKG 695

Query: 143 IYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIEN 196
               P+ V    ++     S  + + ++L   M+ KG      VY  L++G  R   +E 
Sbjct: 696 --FPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 753

Query: 197 A-------------------------FHMHRQVIQRGFV-------------PNIVTCNK 218
           A                         F   +  +    +             PN VT N 
Sbjct: 754 AITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNI 813

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++  LC  G +  A  LF  +      P V+T+++L+N + K  +  + F +++ ++   
Sbjct: 814 MIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAG 873

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELL-----LTALDRGLKLDVVVFSSVMDAYVGIGD 333
           + PD I+YS++I+   K G   +   LL       A+D G KL +    +++  +  +G+
Sbjct: 874 IEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 933

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +  A +  + M+   ++P+  +   LI   C
Sbjct: 934 MEVAEKVVENMVRLKYIPDSSTVIELINESC 964


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 242/519 (46%), Gaps = 63/519 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNS----VGQYYK 168
           +S LIE Y   G  +++VE F  M D      PDL     ++  LV   +    +  Y +
Sbjct: 131 FSVLIEAYSEAGMDEKAVESFGLMRDFDC--KPDLFAFNLILHFLVRKEAFLLALAVYNQ 188

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + +         Y  L++GL +    ++A  +  ++  RG +PN +  + +L  LC   +
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +A  LF  +   G   +++T++ L+N FCK   L+ AF L  L+ +   +  +I Y  
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+GLF+A R +E +                                     Y +ML   
Sbjct: 309 LINGLFRARRYEEAH-----------------------------------MWYQKMLREN 333

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V+ Y+I+I+GL Q+GR+ EA  L G++  R L P  + Y++LI GFC  G L +  
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 409 SLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           SL   + K    P+      ++C +  NGL+  A   F +  ++  +P++  FN+L++G 
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 464 CRLKRATDTVKLFMLMGMYNIKP--------------DVITHTVLIRGIASQGSLSSAIL 509
           C+  R  +   LF  M +   KP              D+ +  V++  +   G +  A  
Sbjct: 454 CKANRLEEARLLFYQMEIVR-KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYK 512

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           L  Q++  G+ PD+ TY+ +I+G  K  NI+    +FK M+  G  PD   Y  L++ L 
Sbjct: 513 LLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLY 572

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +    + AL++F Q+  +G  P+  TY TI+   C  N+
Sbjct: 573 RAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENN 611



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 175/363 (48%), Gaps = 40/363 (11%)

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           +  ++I  L K    +   ++L    +  +K+    FS +++AY   G   +AV+++  M
Sbjct: 95  VQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLM 154

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
            +    P++ ++++++  L ++   + A  ++ Q+L   L P ++TY  LI G CK+ K 
Sbjct: 155 RDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKT 214

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
           +D   L+D M  RG+ P+ ++ S++++GL     + DA R F +        +L  +N L
Sbjct: 215 QDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVL 274

Query: 460 MDGCC-----------------------------------RLKRATDTVKLFMLMGMYNI 484
           ++G C                                   R +R  +    +  M   NI
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENI 334

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           KPDV+ +T++IRG++ +G ++ A+ L  +M +RGL PD I Y+A+I G      +     
Sbjct: 335 KPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAES 394

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +   + ++   P+   Y++L+  + K   ++ A  +F ++   G  P ++T+N++I G C
Sbjct: 395 LRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454

Query: 605 SLN 607
             N
Sbjct: 455 KAN 457



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/429 (20%), Positives = 182/429 (42%), Gaps = 64/429 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I    + G++ E++ +   M++ G  L PD +    L+    D   + +   L R 
Sbjct: 341 YTIMIRGLSQEGRVTEALTLLGEMTERG--LRPDTICYNALIKGFCDMGYLDEAESL-RL 397

Query: 173 MRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
              K  C      Y  L+ G+ + G+I  A H+ +++ + G +P++VT N ++  LC   
Sbjct: 398 EISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKAN 457

Query: 228 QIGNASSLFDVLLLVGPKP--------------NVVTFSTLINAFCKEAKLEKAFQLYNL 273
           ++  A  LF  + +V  KP              ++ +   ++   C+   + KA++L   
Sbjct: 458 RLEEARLLFYQMEIV-RKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQ 516

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           +++  ++PD+  Y+ILI+G  K                                    G+
Sbjct: 517 LVDSGVLPDIRTYNILINGFCK-----------------------------------FGN 541

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           +  A + +  M   G +P+ ++Y  LI GL + GR  +A  +F Q++ +   P   TY +
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601

Query: 394 LIDGFCKSGKLRDGFSLYDNMIK--RGLKPDA--VVCSLLINGLMGDALRFFFQSVRMTL 449
           ++   C+   +    S++   ++  RG + +   VV     N  +  A+R   +    + 
Sbjct: 602 IMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSK 661

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
             +L  +   + G  + KR  +   +F ++  + +     +  +LI  +    +L  A+ 
Sbjct: 662 NFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMD 721

Query: 510 LFFQMLKRG 518
           +F   L+RG
Sbjct: 722 VFLFTLERG 730


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 219/451 (48%), Gaps = 26/451 (5%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y   ++ L +    + A+   +Q+ +RG+ P+  T + +L+ LC  G++  A  L   L
Sbjct: 40  TYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL 99

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD-LVPDLIIYSILIDGLFKAGR 298
              G K NV+T+S +I+  CK ++++ A +++  M      VPD++ ++ L+ GL    R
Sbjct: 100 RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGER 159

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + E   L       G + +V+ +S+++D     G +  A + ++ M+    +P++++Y+ 
Sbjct: 160 MSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTS 219

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS-----------------LIDGFCKS 401
            + GLC+  R+ EAC    +++ +  +   + +S+                 +I+  C+S
Sbjct: 220 FVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRS 279

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI---PNL 453
           G L +    ++ MI R   P A + + LI+ +     + D +  F +   M      PNL
Sbjct: 280 GMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNL 339

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +N ++D  C+ K+  +  +L   M  Y + PDV+T++ L+ G+   G L  A  L  +
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEE 399

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M K G+ PD  T ++I++ L K   +   L   + M+  G  PD+  YN LL+ L K   
Sbjct: 400 MSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGR 459

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +D A+    ++      PD+ +Y  II   C
Sbjct: 460 IDEAITFLAKMVAAKCTPDVFSYTIIITALC 490



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/549 (24%), Positives = 249/549 (45%), Gaps = 95/549 (17%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS ++    + G++D++ E+   + + G+ L+                            
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLN---------------------------- 107

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQV-IQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                 Y  +++G  +   +++A  + + +    G VP++VT N +LK LC   ++  A 
Sbjct: 108 ---VITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAF 164

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            LF+ +   G +PNV+++STL++  CK  +L++A +L+  M+E   VPDL+ Y+  + GL
Sbjct: 165 VLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGL 224

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVM-----------------DAYVGIGDVGR 336
            KA R+ E  +     + +G K D V FS+V+                 +     G +  
Sbjct: 225 CKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDE 284

Query: 337 AVQTYDRMLN------------------------GGFL--------------PNVISYSI 358
           A +T++ M++                         G L              PN+ +Y+I
Sbjct: 285 ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNI 344

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           ++  LC+  +L EA  L  ++    L P ++TYS+L+DG CK GKL     L + M K G
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404

Query: 419 LKPDAVVCSLLINGLMGDALRFFFQSVRMTL-----IPNLFIFNTLMDGCCRLKRATDTV 473
           + PD+   + ++N L       +  S   T+      P+L  +NTL+DG C+  R  + +
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
                M      PDV ++T++I  +   G  + A  +F +M+KRG+ PD + Y +++ GL
Sbjct: 465 TFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGL 524

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            +     + L + K    +   PD  ++ ++++ L K    + A ++  ++ D G   D 
Sbjct: 525 ARNGLEDLALELLKT---SLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADA 581

Query: 594 ITYNTIICG 602
            TY  ++ G
Sbjct: 582 FTYINVVRG 590



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 206/440 (46%), Gaps = 62/440 (14%)

Query: 227 GQIGNASSLFDVL-LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           G+I     LFD L    G + +V T++  ++A  K    + A++ +  M      PD   
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ------ 339
           YSI++ GL KAG L +  ELL    + G+KL+V+ +S V+D       V  A++      
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 340 ----------TYDRMLNG--------------------GFLPNVISYSILIKGLCQQGRL 369
                     T++ +L G                    G  PNVISYS L+ GLC+ GRL
Sbjct: 136 AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EAC L+ +++ +   P L+ Y+S + G CK+ ++ +       M+ +G K DAV  S +
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255

Query: 430 I----------------------NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           I                      +G++ +A + F + +     P+  +FNTL+   C+ K
Sbjct: 256 IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315

Query: 468 RATDTVKLFMLMGM---YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           R  D V LF  M     +   P++ T+ +++  +     L  A  L  +M   GL+PDV+
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVV 375

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TYSA++ GL K   +     + + M + GV PD      +LN L K   +D AL     +
Sbjct: 376 TYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETM 435

Query: 585 TDRGLEPDIITYNTIICGYC 604
             RG  PD++TYNT++ G C
Sbjct: 436 KARGSTPDLVTYNTLLDGLC 455



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 209/440 (47%), Gaps = 36/440 (8%)

Query: 101 FRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RL 153
           F LF + +   GC+     YS L++   + G++DE+  ++  M +      PDLV     
Sbjct: 164 FVLF-EYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV--PDLVAYTSF 220

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKG--------------FC-------VYEFLMNGLLRKG 192
           ++ L  +N V +    CR M  KG               C           ++  L R G
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG 280

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP---KPNVV 249
           +++ A     ++I R   P+    N ++  +C + ++ +   LF  +  +      PN+ 
Sbjct: 281 MLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           T++ +++  CK  +L++A +L N M    L PD++ YS L+DGL K G+L    +LL   
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
              G+  D    +S+++A    G V  A+   + M   G  P++++Y+ L+ GLC+ GR+
Sbjct: 401 SKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRI 460

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA     +++  +  P + +Y+ +I   C+SG+     +++  M+KRG+ PD V+   L
Sbjct: 461 DEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSL 520

Query: 430 INGLMGDALR-FFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           ++GL  + L     + ++ +L  P+  +   ++DG C+  +A D  ++   M       D
Sbjct: 521 LDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPAD 580

Query: 488 VITHTVLIRGIASQGSLSSA 507
             T+  ++RG+   G +  A
Sbjct: 581 AFTYINVVRGLRKLGKVDKA 600



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 163/370 (44%), Gaps = 59/370 (15%)

Query: 69  QLIHVLLQSDMRDVASHVFDKM------------------VIQFGKTYNFFRLFR--DSL 108
           Q+I  L +S M D A   F++M                  V +  +  +   LF+   S+
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330

Query: 109 GDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
            +F C      Y+ +++N  +  ++DE+ E+   M++ G  LSPD+V             
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG--LSPDVV------------- 375

Query: 164 GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
                            Y  L++GL + G ++ A  +  ++ + G  P+  T   IL  L
Sbjct: 376 ----------------TYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL 419

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
              G++  A S  + +   G  P++VT++TL++  CK  ++++A      M+     PD+
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDV 479

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
             Y+I+I  L ++G+    + +    + RG+  D V++ S++D     G    A++    
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT 539

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
            L     P+ + + +++ GLC+ G+  +AC +  ++          TY +++ G  K GK
Sbjct: 540 SL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGK 596

Query: 404 LRDGFSLYDN 413
           +     L D+
Sbjct: 597 VDKARQLVDD 606



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 1/172 (0%)

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A   F Q  R    P+ F ++ ++ G C+        +L   +    +K +VIT++V+I 
Sbjct: 57  AYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVID 116

Query: 497 GIASQGSLSSAILLFFQM-LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           G      +  A+ +F  M    G  PDV+T+++++ GL  G+ +S    +F+ M + G  
Sbjct: 117 GCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCE 176

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           P++  Y+ LL+ L K   LD A +L+ ++ ++   PD++ Y + + G C  N
Sbjct: 177 PNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKAN 228



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 10/128 (7%)

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-LKRGLTPDVITYSAIIHGLFKG 536
           ++G Y +  +V+ H          G +S+ + LF  +  ++G    V TY+  +  L K 
Sbjct: 1   MLGRYTVVGEVLRHL---------GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKA 51

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
               +    F+ M+R G  PD   Y+++L  L K   LD A +L GQL + G++ ++ITY
Sbjct: 52  NAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITY 111

Query: 597 NTIICGYC 604
           + +I G C
Sbjct: 112 SVVIDGCC 119


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 243/505 (48%), Gaps = 34/505 (6%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           ++F   +      Y+ +I  + R   +D ++++F  M+  G   +      L++ L DS 
Sbjct: 410 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 469

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNG----LLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            V + + L R M   G         G    L   G  E+A+ +   +  +G  PN+ T  
Sbjct: 470 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 529

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++  LC++G +  A  LF  +   G  PN VT++ LIN   +  +++ AF + NLM   
Sbjct: 530 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 589

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            L  +++ Y+ +I G    G  K+   ++   L RG   ++V +++++  Y   G+   A
Sbjct: 590 GLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 649

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++  D M +GG  P+  SY+ LI G C+  ++  A GLF +++   L P+ +TY++LIDG
Sbjct: 650 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 709

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
           +CK  KL    SL ++M + G +                              PN+  +N
Sbjct: 710 YCKDEKLDTATSLLEHMKRSGCR------------------------------PNVQTYN 739

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            L+ G  +    +   +L  +M    I P+V+T+T +I G+   GS S A+ +F +M+++
Sbjct: 740 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 799

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G  P+++TYS++I  L +   +    ++F  +ER+G+ PD   Y  ++   I    ++ A
Sbjct: 800 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 859

Query: 578 LKLFGQLTDRGLEPDIITYNTIICG 602
               G++   G +P + TY  +I G
Sbjct: 860 FNFLGRMIKAGCQPTLWTYGVLIKG 884



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 229/503 (45%), Gaps = 40/503 (7%)

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHM 200
           MG++    L+  L    + +  + +Y+++          +Y  ++N L + G + +A  +
Sbjct: 348 MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETI 407

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
            ++V +    P+  T   ++   C    + +A  +F+ +   G +PN VT+STLIN  C 
Sbjct: 408 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 467

Query: 261 EAKLEKAFQL--------------------------------YNLMMEMD---LVPDLII 285
             ++ +AF L                                + L ++M      P++  
Sbjct: 468 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 527

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LI GL  +G LK    L       G+  + V ++++++  V    +  A    + M 
Sbjct: 528 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 587

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G   N+++Y+ +IKG C  G   +A  +   +L R    +L+TY+++I G+C SG   
Sbjct: 588 RNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTT 647

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
               + D M   G KPD    + LI G      M  A   F + V   L PN   +  L+
Sbjct: 648 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 707

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG C+ ++      L   M     +P+V T+ VLI G+  Q + S A  L   M++ G+ 
Sbjct: 708 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 767

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+V+TY+A+I GL K  + S+ L MF  M   G  P++  Y+ L+  L +E  ++ A  L
Sbjct: 768 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 827

Query: 581 FGQLTDRGLEPDIITYNTIICGY 603
           F +L   GL PD ITY  +I  Y
Sbjct: 828 FAELERHGLIPDEITYVKMIEAY 850



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 142/561 (25%), Positives = 253/561 (45%), Gaps = 63/561 (11%)

Query: 101  FRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS 155
            +RLF D + + GC+     Y+ LI      G +  ++ +F  MS  G++ +      L++
Sbjct: 510  WRLFVD-MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 568

Query: 156  CLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
             LV++  +   + +   M   G       Y  ++ G    G  + A  +   ++QRG   
Sbjct: 569  ILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 628

Query: 212  NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
            N+VT N I+K  C +G   +A  + D++   G KP+  +++ LI  FCK +K+E AF L+
Sbjct: 629  NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 688

Query: 272  NLMMEMDLVPDLIIYSILIDGLFKAGRL------------------------------KE 301
            N M++  L P+ + Y+ LIDG  K  +L                              K+
Sbjct: 689  NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748

Query: 302  GN-----ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
             N     EL    ++ G+  +VV +++++D     G    A++ +++M+  G LPN+++Y
Sbjct: 749  NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 808

Query: 357  SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
            S LI+ L Q+G++ EA  LF ++    L P  +TY  +I+ +  SGK+   F+    MIK
Sbjct: 809  SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 868

Query: 417  RGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL- 475
             G +P      +LI GL  +   +     R+  +P+      ++  C    + TD   + 
Sbjct: 869  AGCQPTLWTYGVLIKGLKNE---YLLADQRLAALPD------VVPNCSFGYQTTDQDAVS 919

Query: 476  FMLMGMYNIKP--DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
             M   +  + P   V     L+  +++ G    A  L   M+ +GL PD   Y++++  L
Sbjct: 920  VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 979

Query: 534  FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
             + +N+ + + +FK M   G    +  Y  L+  L +      A   F  +  R   PD 
Sbjct: 980  LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 1039

Query: 594  ITYNTIICGYCSLNSCLIDGY 614
            +    +I G       L DGY
Sbjct: 1040 VVQAVLIDGL------LRDGY 1054



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 185/376 (49%), Gaps = 5/376 (1%)

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           S  D+L   G +  +  +S L+    +          Y+ M+   + P+L+IY+ +I+ L
Sbjct: 336 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 395

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K G + +   ++    +  +  D   ++S++  +    D+  A+Q +++M   G  PN 
Sbjct: 396 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 455

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++YS LI GLC  GR+ EA  L  ++++  + P+  T +  I   C  G   D + L+ +
Sbjct: 456 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 515

Query: 414 MIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M  +G +P+     A++  L ++GL+  A+  F +  R  + PN   +N L++     +R
Sbjct: 516 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 +  LMG   +  +++T+  +I+G    G    A+L+   ML+RG + +++TY+ 
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 635

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           II G     N +  L +  LM   G  PD   Y  L+    K   +++A  LF ++ D G
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695

Query: 589 LEPDIITYNTIICGYC 604
           L P+ +TY  +I GYC
Sbjct: 696 LCPNEVTYTALIDGYC 711



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 191/412 (46%), Gaps = 46/412 (11%)

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           +  +L  G +PN++ ++ +INA CK+  +  A  +   + E ++ PD   Y+ +I G  +
Sbjct: 373 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 432

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD---RMLNGGFLPN 352
              L    ++       G + + V +S++++   G+ D GR  + +D    M+  G LP 
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLIN---GLCDSGRVNEAFDLIREMILHGILPT 489

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             + +  I  LC  G   +A  LF  +  +  EP++ TY++LI G C SG L+    L+ 
Sbjct: 490 AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH 549

Query: 413 NMIKRGLKPDAVVCSLLIN---------------GLMG---------------------- 435
            M + G+ P+ V  + LIN                LMG                      
Sbjct: 550 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILG 609

Query: 436 ---DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
               A+      ++     NL  +NT++ G C     T  +++  LM     KPD  ++T
Sbjct: 610 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 669

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G      + SA  LF +M+  GL P+ +TY+A+I G  K + +     + + M+R+
Sbjct: 670 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 729

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           G  P++  YNVL++ L K+ N   A +L   + + G+ P+++TY  +I G C
Sbjct: 730 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 781



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 144/318 (45%), Gaps = 34/318 (10%)

Query: 293 LFKAGRLKEGNELLLTALD----RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L K+   KE     ++ LD     GL++ +  +S+++     +G     +  Y RML+ G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN++ Y+ +I  LC+ G + +A  +  +V    + P   TY+S+I G C+   L    
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            +++ M K G +P                              N   ++TL++G C   R
Sbjct: 441 QVFNQMAKEGCEP------------------------------NTVTYSTLINGLCDSGR 470

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   L   M ++ I P   T T  I  +   G    A  LF  M  +G  P+V TY+A
Sbjct: 471 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 530

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I GL     + V + +F  M R+GV P+   YN L+N+L++   +  A  +   +   G
Sbjct: 531 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 590

Query: 589 LEPDIITYNTIICGYCSL 606
           L  +I+TYN +I GYC L
Sbjct: 591 LFTNIVTYNEMIKGYCIL 608



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 167/387 (43%), Gaps = 48/387 (12%)

Query: 93   QFGKTYNFFRLFRDSLGDFGCD----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
            +  K  + F LF + + D  C     Y+ LI+ Y +  K+D +  +  +M   G   +  
Sbjct: 677  KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 736

Query: 149  LVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
                L+  L   N+     +LC+ M  +G       Y  +++GL + G    A  M  ++
Sbjct: 737  TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 796

Query: 205  IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
            I++G +PN++T + +++ L   G++  A +LF  L   G  P+ +T+  +I A+    K+
Sbjct: 797  IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 856

Query: 265  EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV---- 320
            E AF     M++    P L  Y +LI GL         NE LL         DVV     
Sbjct: 857  EHAFNFLGRMIKAGCQPTLWTYGVLIKGL--------KNEYLLADQRLAALPDVVPNCSF 908

Query: 321  --------FSSVMDAYVGIGDVGRAVQTYD--------------------RMLNGGFLPN 352
                      SVM A +   D G +VQ  +                     M++ G  P+
Sbjct: 909  GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 968

Query: 353  VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
              +Y+ L+  L +   +  A G+F  +  +  E  L  Y  LI   C+  + ++    ++
Sbjct: 969  QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 1028

Query: 413  NMIKRGLKPDAVVCSLLINGLMGDALR 439
            NM+ R   PD VV ++LI+GL+ D  +
Sbjct: 1029 NMLMRTWNPDDVVQAVLIDGLLRDGYK 1055


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 204/386 (52%), Gaps = 5/386 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P++ T N ++   C   ++G A S+   LL +G +P+  TF+TLI   C E K+ +A
Sbjct: 142 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 201

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L++  +     PD++ Y  L++GL K G       LL + + +  + +V+ +++++D+
Sbjct: 202 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDS 261

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                 V  A   +  M+  G  P++ +Y+ LI  LC          L  +++  ++ P+
Sbjct: 262 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 321

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++ +S+++D  CK G +     + D MIKRG++PD V  + L++G      M +A++ F 
Sbjct: 322 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 381

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             V    +PN+  +N L++G C+++R    + L   M +  +  D +T+  LI G+   G
Sbjct: 382 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 441

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  AI LF +M+  G  PD++TY  ++  L K  +++  + + K +E + +  DI +YN
Sbjct: 442 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 501

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRG 588
           + ++ + +   L+AA  LF  L+ +G
Sbjct: 502 IAIDGMCRAGELEAARDLFSNLSCQG 527



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 186/364 (51%), Gaps = 5/364 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF +  ++++ G  P+  T N +++ LC+ G+IG A  LFD  +  G +P+VVT+ TL+N
Sbjct: 166 AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMN 225

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             CK      A +L   M++ +  P++I Y+ +ID L K  ++ E   L    + +G+  
Sbjct: 226 GLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP 285

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D+  ++S++ A   + +        + M+N   +PNV+ +S ++  LC++G +  A  + 
Sbjct: 286 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 345

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
             ++ R +EP ++TY++L+DG C   ++ +   ++D M+ +G  P+    ++LING    
Sbjct: 346 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 405

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             M  A+    Q     LI +   +NTL+ G C + R    + LF  M      PD++T+
Sbjct: 406 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 465

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            +L+  +     L+ A++L   +    L  D++ Y+  I G+ +   +     +F  +  
Sbjct: 466 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSC 525

Query: 552 NGVA 555
            G A
Sbjct: 526 QGFA 529



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 190/370 (51%), Gaps = 9/370 (2%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + LI ++  + ++  +  + A +  +G          L+  L     +G+   L     G
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF      Y  LMNGL + G    A  + R ++Q+   PN++  N I+  LC + Q+  
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A +LF  ++  G  P++ T+++LI+A C   + +    L N M+   ++P+++++S ++D
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G +   ++++   + RG++ DVV ++++MD +    ++  AV+ +D M++ G +P
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 390

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV SY+ILI G CQ  R+ +A GL  Q+ ++ L    +TY++LI G C  G+L+   +L+
Sbjct: 391 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 450

Query: 412 DNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M+  G  PD V   +L+     N  + +A+          L  ++ ++N  +DG CR 
Sbjct: 451 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 510

Query: 467 KRATDTVKLF 476
                   LF
Sbjct: 511 GELEAARDLF 520



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 149/309 (48%), Gaps = 9/309 (2%)

Query: 307 LTALDRGLKL----DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           L++ +R L +      V F+ ++ +   +      +    +M + G  P+V + +ILI  
Sbjct: 97  LSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINS 156

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C   RL  A  +  ++L    +P   T+++LI G C  GK+ +   L+D  I  G +PD
Sbjct: 157 FCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPD 216

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V    L+NGL        A+R     V+    PN+  +NT++D  C+ ++ T+   LF 
Sbjct: 217 VVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFS 276

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I PD+ T+  LI  + +         L  +M+   + P+V+ +S ++  L K  
Sbjct: 277 EMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 336

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I++   +  +M + GV PD+  Y  L++       +D A+K+F  +  +G  P++ +YN
Sbjct: 337 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 396

Query: 598 TIICGYCSL 606
            +I GYC +
Sbjct: 397 ILINGYCQI 405



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 5/208 (2%)

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNT 458
           L D  S ++ M+     P  V  + L+  +         L    Q     + P+++  N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L++  C L+R      +   +     +PD  T   LIRG+  +G +  A+ LF + +  G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             PDV+TY  +++GL K  N S  + + + M +    P++  YN +++ L K+  +  A 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSL 606
            LF ++  +G+ PDI TYN++I   C+L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNL 300



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 49/303 (16%)

Query: 93  QFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G T    RL R S+    C      Y+ +I++  +  ++ E+  +F+ M   GI  SP
Sbjct: 229 KVGNTSAAIRLLR-SMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGI--SP 285

Query: 148 DLV--QRLMSCLVDSNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMH 201
           D+     L+  L +         L   M          V+  +++ L ++G+I  A  + 
Sbjct: 286 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 345

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV------------- 248
             +I+RG  P++VT   ++   C+  ++  A  +FD ++  G  PNV             
Sbjct: 346 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 405

Query: 249 ----------------------VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
                                 VT++TLI+  C   +L+ A  L++ M+    +PDL+ Y
Sbjct: 406 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 465

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            IL+D L K   L E   LL       L  D++V++  +D     G++  A   +  +  
Sbjct: 466 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSC 525

Query: 347 GGF 349
            GF
Sbjct: 526 QGF 528


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 227/435 (52%), Gaps = 15/435 (3%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G+ F      MN       ++ A  +   +IQ   +P+IV  +K+L  +  +       S
Sbjct: 38  GRAFTTKRLSMN-------LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVIS 90

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF  + + G   ++ T++ +IN  C+ ++   A  +   MM+    PD++  S LI+G  
Sbjct: 91  LFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           +  R+    +L+    +   KLDVV++++++D +   G V  A+  + RM   G   + +
Sbjct: 151 QGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTV 210

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ L+ GLC  GR  +A  L   +++R + P+++T+++LI+ F + GK  +    Y+ M
Sbjct: 211 TYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEM 270

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           I+R + PD    + +I+GL     + +A +     V     P++  +NTL++G C+ KR 
Sbjct: 271 IRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRV 330

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  KL   M    +  D +T   +I+G    G   +A  +F +M   G  P++ TYS +
Sbjct: 331 DEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSIL 387

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           ++GL     +   L +F+ M+++ +  DI  YN++++ +    N++ A  LF  L+ +GL
Sbjct: 388 LYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGL 447

Query: 590 EPDIITYNTIICGYC 604
           EPD++TY T+I G+C
Sbjct: 448 EPDVVTYTTMISGFC 462



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 217/437 (49%), Gaps = 10/437 (2%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR----GKGFCVYEF 183
           +DE++++F  M       S     +L+S +  S +      L   M     G     Y  
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++N L R      A  +  ++++ G+ P++VT + ++   C   ++  A  L   +  + 
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            K +VV ++T+I+ FCK   +  A  L+  M    +  D + Y+ L+ GL  +GR  +  
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L+   + R +  +V+ F+++++A+V  G    A + Y+ M+     P+V +Y+ +I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C  G++ EA  +   ++ +   P ++TY++LI+GFCK+ ++ +G  L   M +RGL  D 
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 424 VVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           V  + +I G       DA +  F   RM   PN+  ++ L+ G C   R    + LF  M
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFS--RMGSRPNIRTYSILLYGLCYNWRVEKALVLFESM 407

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               ++ D+ T+ ++I G+   G++  A  LF  +  +GL PDV+TY+ +I G  + +  
Sbjct: 408 QKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLW 467

Query: 540 SVGLHMFKLMERNGVAP 556
                +++ M+ +G+ P
Sbjct: 468 DKADFLYRKMQEDGLLP 484



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 59/105 (56%)

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           +L  AI LF  M++    P ++ +S ++  + K KN  + + +F  ME  G+  D+  YN
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +++N L +      AL + G++   G EPD++T +++I G+C  N
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGN 153


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 235/490 (47%), Gaps = 37/490 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I  YV+   +D S+  F  M D G     +    L++ +V S+S  Q++       
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWW------- 149

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
               C +             E+   +   V   G V         +K  C  G+I  +  
Sbjct: 150 ----CFFN------------ESKIKVVLDVYSFGIV---------IKGCCEAGEIEKSFD 184

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   L   G  PNVV ++TLI+  CK+ ++EKA  L+  M +  LV +   Y++LI GLF
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLF 244

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G  K+G E+     + G+  ++  ++ VM+     G    A + +D M   G   N++
Sbjct: 245 KNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIV 304

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI GLC++ +  EA  +  Q+    + P+L+TY++LIDGFC  GKL    SL  ++
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDL 364

Query: 415 IKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
             RGL P  V  ++L++G    GD   A +   +     + P+   +  L+D   R    
Sbjct: 365 KSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              ++L   M    + PDV T++VLI G   +G ++ A  LF  M+++ L P+ + Y+ +
Sbjct: 425 ETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTM 484

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  K  +    L +F+ ME   +AP++A Y+ L+ +L KE  L  A  L  ++ D G+
Sbjct: 485 ILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGI 544

Query: 590 EPDIITYNTI 599
           +P     N I
Sbjct: 545 DPSDTICNLI 554



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 227/464 (48%), Gaps = 46/464 (9%)

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
           ++ S    S+S+  Y       + K   +YE ++N  ++   ++++ +   +++ +GFVP
Sbjct: 69  KIQSQFFTSSSLLHYLTESETSKTKSR-LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVP 127

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC--KEAKLEKAFQ 269
                                S+ F+ LL       VV  S+    +C   E+K++    
Sbjct: 128 --------------------GSNCFNNLLTF-----VVGSSSFNQWWCFFNESKIK---- 158

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
                    +V D+  + I+I G  +AG +++  +LL+   + G   +VV++++++D   
Sbjct: 159 ---------VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G++ +A   +  M   G + N  +Y++LI GL + G   +   ++ ++    + P+L 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           TY+ +++  CK G+ +D F ++D M +RG+  + V  + LI GL       +A +   Q 
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
               + PNL  +NTL+DG C + +    + L   +    + P ++T+ VL+ G   +G  
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           S A  +  +M +RG+ P  +TY+ +I    +  N+   + +   ME  G+ PD+  Y+VL
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVL 449

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           ++    +  ++ A +LF  + ++ LEP+ + YNT+I GYC   S
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGS 493



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 156/332 (46%), Gaps = 9/332 (2%)

Query: 107 SLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            +G FG       Y+ LI    + G   +  E++  M + G++ +      +M+ L    
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDG 282

Query: 162 SVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
                +K+   MR +G       Y  L+ GL R+     A  +  Q+      PN++T N
Sbjct: 283 RTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYN 342

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++   C  G++G A SL   L   G  P++VT++ L++ FC++     A ++   M E 
Sbjct: 343 TLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEER 402

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + P  + Y+ILID   ++  ++   +L  +  + GL  DV  +S ++  +   G +  A
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            + +  M+     PN + Y+ +I G C++G    A  LF  +  + L P++ +YS LI  
Sbjct: 463 SRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRV 522

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            CK  KL++   L + MI  G+ P   +C+L+
Sbjct: 523 LCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/568 (26%), Positives = 254/568 (44%), Gaps = 80/568 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+  Y + G+   ++E+  YM   GI          +  L  ++   + Y L + MR
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330

Query: 175 GK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  L+NG +++G I  A  +  ++ +    PN VT N ++   C  G   
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L D +   G + N VT+ TL+N  CK  K E A +L   M   D+V   I Y++LI
Sbjct: 391 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 450

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K G L E  +L+      G+  DV+ +SS+++ +  +G++  A +   RM   G +
Sbjct: 451 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 510

Query: 351 PNVISYSILIKGLCQQGRLVEA------------------CGLFGQVLIRR--------- 383
            N I YS LI   CQ G + EA                  C +    L R          
Sbjct: 511 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 570

Query: 384 --------LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-------------- 421
                   L P+ +TY  +I+G+   G   + FS +D+MIK G  P              
Sbjct: 571 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 630

Query: 422 ---------------------DAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFI 455
                                D+V+ + L+     +G + +A+  F + V+  ++P+ + 
Sbjct: 631 GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 690

Query: 456 FNTLMDGCCRLKRATDTVKLF-MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           +++L+ G CR  +A   V LF   MG   + P+ + +T L+ G++  G   +A   F +M
Sbjct: 691 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEM 750

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           +K+G  PD + ++AII    +   +      F  M   GV P++A YN+LL+   K+  L
Sbjct: 751 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 810

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICG 602
              L L+  +   G+ PD +T++++I G
Sbjct: 811 LRYLSLYSTMMREGIFPDKLTFHSLILG 838



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 236/487 (48%), Gaps = 20/487 (4%)

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGL 188
           D +  I  ++  MGI       + +   L+D+      Y LC ++      V++ L+   
Sbjct: 129 DSAKSILRHLCQMGIG-----SKSIFGALMDT------YPLCNSIPS----VFDLLIRVY 173

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
           L++G+I+ A      V   GF P++ TCN IL  +  + +     SLF  +   G  PNV
Sbjct: 174 LKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNV 233

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
            TF+ LIN  C E  L+KA  L   M E   VP ++ Y+ L++   K GR K   EL+  
Sbjct: 234 GTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDY 293

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
            + +G++ DV  ++  +D         +A     +M      PN ++Y+ LI G  ++G+
Sbjct: 294 MICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGK 353

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           +  A  +F ++    L P+ +TY++LI G C  G   +   L D+M   GL+ + V    
Sbjct: 354 IGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT 413

Query: 429 LINGLMG----DALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           L+NGL      +  +   + +R+  ++     +  L+DG C+     + V+L   M    
Sbjct: 414 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 473

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           + PDVIT++ LI G    G++ SA  +  +M + GL  + I YS +I+   +  N++  +
Sbjct: 474 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 533

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            ++ +M  NG   D    NVL++ L ++  L  A K    ++  GL P+ ITY+ II GY
Sbjct: 534 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 593

Query: 604 CSLNSCL 610
            S+   L
Sbjct: 594 GSIGDPL 600



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/615 (24%), Positives = 265/615 (43%), Gaps = 61/615 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
           N  + NL   +    A    K     + SPN      LI+  ++     VA+ VF++M  
Sbjct: 307 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMS- 365

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +F  + N               Y+ LI  +  +G  +E++ +  +M   G+ L+      
Sbjct: 366 KFDLSPNCV------------TYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT 413

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L++ L          +L   MR      G   Y  L++GL + G+++ A  +   + + G
Sbjct: 414 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 473

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             P+++T + ++   C  G I +A  +   +   G   N + +STLI  FC+   + +A 
Sbjct: 474 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 533

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           ++Y +M       D    ++L+  L + G+L E  + L      GL  + + +  +++ Y
Sbjct: 534 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 593

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA---------------- 372
             IGD   A   +D M+  G  P+  +Y  L+KGLC+ G LVEA                
Sbjct: 594 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 653

Query: 373 -------------------CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
                                LF +++   + P   TYSSL+ G C+ GK      L+  
Sbjct: 654 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 713

Query: 414 MIKRG-LKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            + RG L P+ V+ + L++GL        A  FF + ++    P+   FN ++D C R  
Sbjct: 714 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 773

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +       F  M  + + P++ T+ +L+ G + + +L   + L+  M++ G+ PD +T+ 
Sbjct: 774 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 833

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           ++I GL K     +G+ +   M   G   D   +N+L+N   +   +  A  L   +   
Sbjct: 834 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 893

Query: 588 GLEPDIITYNTIICG 602
           G+ PD  TYN I  G
Sbjct: 894 GVFPDRDTYNHIFNG 908



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 150/641 (23%), Positives = 253/641 (39%), Gaps = 121/641 (18%)

Query: 51  AIQFFKWTHNCVSSPNIAQ---------LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFF 101
           A++F KW    +  P +             H+L+++ M D A  +   +      + + F
Sbjct: 93  ALKFLKWV---IKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIF 149

Query: 102 RLFRDSL---GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
               D+          +  LI  Y++ G ID +VE F  +  +G   S      +++ +V
Sbjct: 150 GALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMV 209

Query: 159 DSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
                   + L R M  KG C                               PN+ T N 
Sbjct: 210 KDKRTELVWSLFREMSDKGIC-------------------------------PNVGTFNI 238

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++  LC+ G +  A +L   +   G  P +VT++TL+N +CK+ + + A +L + M+   
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 298

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           +  D+  Y++ ID L    R  +   LL       +  + V ++++++ +V  G +G A 
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV------------------- 379
           Q ++ M      PN ++Y+ LI G C  G   EA  L   +                   
Sbjct: 359 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 418

Query: 380 -------LIRRLEPSL---------LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
                  L +RL   +         + Y+ LIDG CK+G L +   L  NM K G+ PD 
Sbjct: 419 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 478

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  S LING      +  A     +  R  L+ N  I++TL+   C+    T+ +K++ +
Sbjct: 479 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAV 538

Query: 479 -----------------------------------MGMYNIKPDVITHTVLIRGIASQGS 503
                                              M    + P+ IT+  +I G  S G 
Sbjct: 539 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 598

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
             +A   F  M+K G  P   TY +++ GL KG N+         +     A D  +YN 
Sbjct: 599 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNT 658

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           LL    K  NL  A+ LF ++    + PD  TY++++ G C
Sbjct: 659 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLC 699



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 210/450 (46%), Gaps = 10/450 (2%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ L+    + G + E+V +F  M    +         L++ L           L     
Sbjct: 656  YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 715

Query: 175  GKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            G+G       +Y  L++GL + G  + AF+   +++++G  P+ V  N I+      GQ+
Sbjct: 716  GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQM 775

Query: 230  GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
              A+  F  +   G  PN+ T++ L++ F K+  L +   LY+ MM   + PD + +  L
Sbjct: 776  MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSL 835

Query: 290  IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
            I GL K+G    G +LL   +  G   D   F+ +++ Y   G + +A    + M   G 
Sbjct: 836  ILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGV 895

Query: 350  LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             P+  +Y+ +  GL ++    E+  +  ++L   + P    Y +LI+G C+ G ++  F 
Sbjct: 896  FPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFK 955

Query: 410  LYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
            L D M   G     V  S ++ GL+      DA+      +RM L+P +  F TLM   C
Sbjct: 956  LKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC 1015

Query: 465  RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
            R  +  + +KL  +M +  +K DV+ + VLI G+ + G  ++A  L+ +M  R L P++ 
Sbjct: 1016 RDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNIT 1075

Query: 525  TYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
            TY+ ++  +    N+  G  +   ++  G+
Sbjct: 1076 TYAVLVDAISAANNLIQGEKLLTDLQERGL 1105



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 144/592 (24%), Positives = 248/592 (41%), Gaps = 81/592 (13%)

Query: 102  RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            R++R  L      YS LI N+ + G + E+++++A M+  G          L+S L    
Sbjct: 503  RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDG 562

Query: 162  SVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP------ 211
             +G+  K    M   G       Y+ ++NG    G   NAF     +I+ G  P      
Sbjct: 563  KLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYG 622

Query: 212  ----------NIVTCNKILKRL-------------------CINGQIGNASSLFDVLLLV 242
                      N+V   K L RL                   C +G +  A +LFD ++  
Sbjct: 623  SLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 682

Query: 243  GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM-EMDLVPDLIIYSILIDGLFKAGRLKE 301
               P+  T+S+L+   C++ K   A  L+   M    L P+ ++Y+ L+DGL KAG  K 
Sbjct: 683  NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 742

Query: 302  GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
                    + +G   D V F++++D+    G + +A   +  M   G  PN+ +Y+IL+ 
Sbjct: 743  AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 802

Query: 362  GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG------------------- 402
            G  ++  L+    L+  ++   + P  LT+ SLI G  KSG                   
Sbjct: 803  GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA 862

Query: 403  ----------------KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
                            K+R  F L + M   G+ PD    + + NGL       ++    
Sbjct: 863  DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 922

Query: 442  FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
             + +   +IP    + TL++G CR+       KL   M         +  + ++RG+   
Sbjct: 923  HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 982

Query: 502  GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
            G    A+L+   ML+  L P + T++ ++H   +   I+  L +  +ME  G+  D+  Y
Sbjct: 983  GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAY 1042

Query: 562  NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
            NVL+  +    +  AA +L+ ++  R L P+I TY  ++    + N+ LI G
Sbjct: 1043 NVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANN-LIQG 1093


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 159/604 (26%), Positives = 278/604 (46%), Gaps = 52/604 (8%)

Query: 21  SESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMR 80
           SES TH      +QA  ++A+L        A+ F  W    +  P     + + + S   
Sbjct: 93  SESLTH------DQAITVVASLADEAGSMVALSFLYWA---IGFPKFRHFMRLYIVSATA 143

Query: 81  -------DVASHVFDKMVIQF---GKTYNFFRLFRD--------SLGDFGCDYSFLIENY 122
                  + A+ V   MV+ F   GK      +  +        S     C    +++  
Sbjct: 144 LIGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNC----VLDVA 199

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQ-RLM--SCLVDSNSVGQYYKLCRAMRGKGFC 179
           V +G ++ +  +F  M   G+  SPD V  +LM  +C  +   V +  K   AM  +GF 
Sbjct: 200 VGMGLVEIAENMFVEMCQRGV--SPDCVSFKLMVVAC-CNMGRVLEAEKWLNAMVERGFI 256

Query: 180 V----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           V       +++   +KG +        ++++ G  PN++    ++  LC  G I  A  L
Sbjct: 257 VDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFEL 316

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD-LVPDLIIYSILIDGLF 294
            + ++  G KPNV T +TLI+  CK+   EKAF+L+  ++  D   P++  Y+ +I+G  
Sbjct: 317 LEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYC 376

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  +L     LL    ++GL  +   +++++D +  +G+  RA +  D M   GF PN+ 
Sbjct: 377 KEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIY 436

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ +I GLC++G L EA  L  +V +  L+   +TY+ L+   C+          ++ M
Sbjct: 437 TYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM 496

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           +K G  PD    + LI+       M ++ R F ++V + LIP    + +++ G CR    
Sbjct: 497 LKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNT 556

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           +  VKLF  M  +   PD IT+  LI G+  +  L  A  L+  M+ +GL+P  +T   +
Sbjct: 557 SLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTL 616

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            +   K  + S  +++   +E+      I   N L+  L  E  LD A   F +L D+  
Sbjct: 617 AYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLDK-- 671

Query: 590 EPDI 593
           EP++
Sbjct: 672 EPNV 675



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 238/493 (48%), Gaps = 37/493 (7%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           ++ N+   GK+ E+V +   M + G+  S     + ++C++D  +VG             
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXS----TQTLNCVLDV-AVGM------------ 202

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
                         G++E A +M  ++ QRG  P+ V+   ++   C  G++  A    +
Sbjct: 203 --------------GLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLN 248

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            ++  G   +  T + +I+AFC++  + +    +  M+EM L P++I ++ LI+GL K G
Sbjct: 249 AMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQG 308

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-GFLPNVISY 356
            +K+  ELL   + RG K +V   ++++D     G   +A + + +++   G+ PNV +Y
Sbjct: 309 SIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTY 368

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + +I G C++ +L  A  L  ++  + L P+  TY++LIDG CK G     + L D M K
Sbjct: 369 TAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGK 428

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G  P+    + +I+GL     + +A R   +     L  +   +  LM   CR      
Sbjct: 429 EGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNR 488

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
           ++  F  M      PD+ ++T LI     Q  +  +  LF + +  GL P   TY+++I 
Sbjct: 489 SLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMIC 548

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G  +  N S+ + +F+ M  +G APD   Y  L++ L KE  LD A  L+  + D+GL P
Sbjct: 549 GYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608

Query: 592 DIITYNTIICGYC 604
             +T  T+   YC
Sbjct: 609 CEVTRLTLAYEYC 621



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 140/318 (44%), Gaps = 41/318 (12%)

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G+LKE   +++   ++GL       + V+D  VG+G V  A   +  M   G  P+ +S+
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
            ++          V AC                         C  G++ +     + M++
Sbjct: 228 KLM----------VVAC-------------------------CNMGRVLEAEKWLNAMVE 252

Query: 417 RGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           RG   D   C+L+I+     G +   + +F++ V M L PN+  F  L++G C+      
Sbjct: 253 RGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQ 312

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDVITYSAII 530
             +L   M     KP+V THT LI G+  +G    A  LF ++++  G  P+V TY+A+I
Sbjct: 313 AFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMI 372

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +G  K   ++    +   M+  G+ P+   Y  L++   K  N   A +L   +   G  
Sbjct: 373 NGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFS 432

Query: 591 PDIITYNTIICGYCSLNS 608
           P+I TYN II G C   S
Sbjct: 433 PNIYTYNAIIDGLCKKGS 450


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 248/508 (48%), Gaps = 10/508 (1%)

Query: 110 DFGCDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
           D  C Y++  +I  Y    + D++ ++   + + G   S      +++CL     V +  
Sbjct: 312 DVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 371

Query: 168 KLCRAMRGKG---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
            L   M+         Y  +++ L   G +  A+ +  ++   G  PN+++ N ++ RLC
Sbjct: 372 TLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLC 431

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
              Q+  A  +F+     G  PN VT+ +LI+   K+ K++ A++L+  M++     + I
Sbjct: 432 KANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPI 491

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           IY+ LI   F  GR ++G+++    + RG + D+ + ++ MD     G+V +    ++ M
Sbjct: 492 IYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDM 551

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
            + GFLP+V SYSILI GL + G+  E   +F  +  +        Y++++DG CKSGK+
Sbjct: 552 KSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKV 611

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
              + + + M  + + P       +++GL     + +A   F ++    +  N+ ++++L
Sbjct: 612 DKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSL 671

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG  ++ R  +   +   M    + P+V T   L+  +     +  A++ F  M +   
Sbjct: 672 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKC 731

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
           +P+  TYS +I+GL + +  +     ++ M++ G+ P++  Y  +++ L K  N+  A  
Sbjct: 732 SPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYS 791

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLN 607
           LF +    G  PD  ++N +I G  + N
Sbjct: 792 LFERFKTNGGIPDSASFNALIEGMSNAN 819



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 243/476 (51%), Gaps = 14/476 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+     G+++E+ +I   M   G++  P+L  V  ++  L  +N + + +++  +
Sbjct: 388 YNIIIDMLCMAGRVNEAYKIRDEMELAGLF--PNLLSVNIMVDRLCKANQLEEAHRIFES 445

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
              +G       Y  L++GL +KG I++A+ +  +++  G   N +    +++   ++G+
Sbjct: 446 ASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGR 505

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             +   ++  ++  G +P++   +T ++   K  ++EK   ++  M     +PD+  YSI
Sbjct: 506 KEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSI 565

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL KAG+ +E + +      +G  LD   +++V+D     G V +A +  + M    
Sbjct: 566 LIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH 625

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P V +Y  ++ GL +  RL EA  LF +   + +E +++ YSSLIDGF K G++ + +
Sbjct: 626 VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAY 685

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVR-MTLIPNLFIFNTLMDGC 463
            + + M+K+GL P+    + L++ L+     D     FQS++ M   PN + ++ L++G 
Sbjct: 686 LILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGL 745

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           CR+++       +  M    + P+V+T+T +I G+A  G+++ A  LF +    G  PD 
Sbjct: 746 CRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDS 805

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK-ECNLDAAL 578
            +++A+I G+           +F+     G   ++     LL+ L K EC   AA+
Sbjct: 806 ASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAI 861



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 150/679 (22%), Positives = 291/679 (42%), Gaps = 127/679 (18%)

Query: 32  FNQANAILANLIKTNNPTPAIQFFKWTHNC---VSSPNIAQLIHVLLQSDMRDVASHVFD 88
           F+    ++  L +   P  A++  +   +    VS P    L+  L +    + A  + D
Sbjct: 176 FSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVD 235

Query: 89  KM---------------VIQFGKT------YNFFRLFR-DSLGDFGCDYSFLIENYVRIG 126
           ++               +  FGK       + FF   +   L      Y+ ++    + G
Sbjct: 236 EVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAG 295

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV----------GQYYKLCRAMRGK 176
           ++ E+ E+F  M            +R + C    N++             YKL   +R +
Sbjct: 296 RLGEAEELFGQME----------AERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRER 345

Query: 177 GFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           G C+     +  ++  L +K  ++ A  +   V+++   PNI T N I+  LC+ G++  
Sbjct: 346 G-CIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNIIIDMLCMAGRVNE 403

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  + D + L G  PN+++ + +++  CK  +LE+A +++    E    P+ + Y  LID
Sbjct: 404 AYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLID 463

Query: 292 GLFKAGRLKEGNELLLTALD-----------------------------------RGLKL 316
           GL K G++ +   L    LD                                   RG + 
Sbjct: 464 GLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRP 523

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK--------------- 361
           D+ + ++ MD     G+V +    ++ M + GFLP+V SYSILI                
Sbjct: 524 DLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIF 583

Query: 362 --------------------GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
                               GLC+ G++ +A  +  ++ ++ + P++ TY S++DG  K 
Sbjct: 584 QAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKI 643

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
            +L + + L++    +G++ + ++ S LI+G      + +A     + ++  L PN++ +
Sbjct: 644 DRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 703

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N+LMD   + +   + +  F  M      P+  T+++LI G+      + A + + +M K
Sbjct: 704 NSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQK 763

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL P+V+TY+ +I GL K  NI+    +F+  + NG  PD A +N L+  +        
Sbjct: 764 QGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPME 823

Query: 577 ALKLFGQLTDRGLEPDIIT 595
           A ++F +   RG   ++ T
Sbjct: 824 AYQVFEETRLRGCRLNVKT 842



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 198/424 (46%), Gaps = 6/424 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+  L+R   +E+AF +   +    F P       ++  L    Q   A  L   +  VG
Sbjct: 147 LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVG 206

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + +V  F+TL+ A  +E ++E A  L + +    L PD+++Y++ ID   KAG +    
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAW 266

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +        GL+ D V ++S++      G +G A + + +M     +P   +Y+ +I G 
Sbjct: 267 KFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY 326

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
               R  +A  L  ++  R   PS+++++S++    K  K+ +  +L+D M K+  KP+ 
Sbjct: 327 GSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNI 385

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              +++I+     G + +A +   +     L PNL   N ++D  C+  +  +  ++F  
Sbjct: 386 STYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFES 445

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
                  P+ +T+  LI G+  +G +  A  LF +ML  G   + I Y+++I   F    
Sbjct: 446 ASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGR 505

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
              G  ++K M R G  PD+ + N  ++ + K   ++    +F  +   G  PD+ +Y+ 
Sbjct: 506 KEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSI 565

Query: 599 IICG 602
           +I G
Sbjct: 566 LIHG 569



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 81/183 (44%)

Query: 423 AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           A+V +L+ +  + DA R       +   P    +  L+      ++    ++L   M   
Sbjct: 146 ALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDV 205

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
             +  V   T L+R +A +G +  A+ L  ++    L PD++ Y+  I    K  ++ + 
Sbjct: 206 GYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMA 265

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
              F  ++ +G+ PD   Y  ++ +L K   L  A +LFGQ+      P    YNT+I G
Sbjct: 266 WKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMG 325

Query: 603 YCS 605
           Y S
Sbjct: 326 YGS 328


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 231/489 (47%), Gaps = 22/489 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  L+  +   G+  E+VE F+ M D     +  +   +   LVD   +     L   M 
Sbjct: 147 FRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMV 206

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  LM+GL ++G+  +A  M  ++++RG VP++     +L  LC  G+I 
Sbjct: 207 SSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIE 266

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  L   +   G  P+ VT++  ++  CK  ++++AF  + L+ +      LI YS LI
Sbjct: 267 DAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLI 326

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGLF+AGR  EG       L + +  D+ +++ ++  +   G    A    D M + GF+
Sbjct: 327 DGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFV 386

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+   Y+ L+K L   G +  A  L  ++L   +     T++ +I G CK G +     +
Sbjct: 387 PDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQV 446

Query: 411 YDNMIKRGLKPDAVVCSLLINGL----MGDALRFFFQSVRMTLIPNLFI----------- 455
           +D M + G  P  +  + LI+GL    M +  R  F  + M   P+LF+           
Sbjct: 447 FDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRD 506

Query: 456 ---FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
                 L+DG C+  +     KL   +    + PDV+T+  LI G+    +L  A+ LF 
Sbjct: 507 TESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFK 566

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           ++  +G++PD ITY  +I GL++    +    +F+ + R+G  P + IYN ++  L +  
Sbjct: 567 ELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMK 626

Query: 573 NLDAALKLF 581
            L  A+ L+
Sbjct: 627 KLSQAINLW 635



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 158/314 (50%), Gaps = 9/314 (2%)

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           AGR +E  E      D   +    V+++V    V  G +  A+  Y+RM++ G LPN  +
Sbjct: 157 AGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTT 216

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y +L+ GLC++G  V+A  +F ++L R + P +  Y+ L+   C  G++ D   L  +M 
Sbjct: 217 YIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMK 276

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFF--FQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           + G  PD V  ++ ++GL     + +A   F   Q    TL   L  ++ L+DG  +  R
Sbjct: 277 ENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTL--GLIGYSCLIDGLFQAGR 334

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             + +  +  M   +I PD+  +T+LIR  A  G    A LL  +M  +G  PD   Y+ 
Sbjct: 335 FDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNT 394

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++  LF   NI     +   M +N V  D   +N+++  L K+  +D A+++F ++ + G
Sbjct: 395 LLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHG 454

Query: 589 LEPDIITYNTIICG 602
             P ++TYN +I G
Sbjct: 455 CHPTVMTYNALIDG 468



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 189/464 (40%), Gaps = 93/464 (20%)

Query: 231 NASSLFDVLLLVG----PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           +A ++FD L        P P+   F  L+ A     + ++A + ++ M + D  P   +Y
Sbjct: 124 DAVAMFDALADARAAGLPAPSAA-FRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVY 182

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + +   L   G +     L    +  G   +   +  +MD     G    A++ +D ML 
Sbjct: 183 NAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLE 242

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLF-------------------------GQV-- 379
            G +P+V  Y++L+  LC +GR+ +A  L                          G+V  
Sbjct: 243 RGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDE 302

Query: 380 LIRRLE--------PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
              R E          L+ YS LIDG  ++G+  +G S Y  M+ + + PD  + ++LI 
Sbjct: 303 AFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIR 362

Query: 432 -----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                G   DA     +      +P+ F +NTL+     +        L   M   N+  
Sbjct: 363 RFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVL 422

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           D  TH ++I G+  +G +  A+ +F +M + G  P V+TY+A+I GL++   +     +F
Sbjct: 423 DSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLF 482

Query: 547 KLME------------------------------------------------RNGVAPDI 558
             ME                                                 +GV PD+
Sbjct: 483 HKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDV 542

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             YN L+N L K  NLD AL+LF +L  +G+ PD ITY T+I G
Sbjct: 543 VTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDG 586



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 38/284 (13%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           D +G+ GC      Y+ LI+   R G ++E+  +F  M +MG   +P L  RL    + +
Sbjct: 448 DEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGN--NPSLFLRLT---LGA 501

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           N V     L +            L++G+ + G +  A+ + R +I+ G VP++VT N ++
Sbjct: 502 NQVRDTESLRK------------LVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLI 549

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC    +  A  LF  L L G  P+ +T+ TLI+   +  +   A  L+  ++     
Sbjct: 550 NGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGF 609

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL---DVVVFSS---VMDAYVG--IG 332
           P L IY+ ++  L +  +L +   L L  L +   L   D V+ ++     D ++   + 
Sbjct: 610 PSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVK 669

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           ++ +  Q Y     G   PN   Y+I + GLCQ  ++ +A  +F
Sbjct: 670 ELIKIDQVY-----GSLNPN--PYTIWVIGLCQVRKIDDALRIF 706



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 24/174 (13%)

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  + V+ F  MG ++ +P    +  + + +  +G +  A+ L+ +M+  G  P+  TY 
Sbjct: 159 RHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYI 218

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++ GL K       L MF  M   G+ PD+ IY VLL+ L  E  ++ A +L   + + 
Sbjct: 219 VLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKEN 278

Query: 588 GLEPDIITYNTIICGYCSLN------------------------SCLIDGYFKS 617
           G  PD +TY   + G C                           SCLIDG F++
Sbjct: 279 GCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQA 332



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 52/113 (46%)

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            L+   +S G    A+  F +M      P    Y+A+   L     I + L ++  M  +
Sbjct: 149 ALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSS 208

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           G  P+   Y VL++ L K      ALK+F ++ +RG+ PD+  Y  ++   C+
Sbjct: 209 GCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCN 261


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 156/576 (27%), Positives = 258/576 (44%), Gaps = 49/576 (8%)

Query: 76  QSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENY----VRI-GKIDE 130
           +S   D++S    ++++ F  T + F  F+   G+    ++    NY    +R+ GKI+E
Sbjct: 79  KSSKPDLSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEE 138

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGL-- 188
              +F  M    I    +    +  CL     + Q     R MR  GF +  +  NGL  
Sbjct: 139 MAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIH 198

Query: 189 --LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
             L+      A  ++R++I  GF P++ T + ++  L     I +   L   +  +G KP
Sbjct: 199 LLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKP 258

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL------------- 293
           NV TF+  I    +  K+ +A+++   M +    PD++ Y++LID L             
Sbjct: 259 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 318

Query: 294 --FKAGRLKEGNELLLTALDR--------------------GLKLDVVVFSSVMDAYVGI 331
              K GR K      +T LDR                    G   DVV F+ ++DA    
Sbjct: 319 AKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKA 378

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G+ G A    D M + G LPN+ +Y+ LI GL +  RL +A  +F  +    ++P+  TY
Sbjct: 379 GNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTY 438

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC-----SLLINGLMGDALRFFFQSVR 446
              ID + KSG        ++ M  +G+ P+ V C     SL   G   +A + F+    
Sbjct: 439 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 498

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
           + L+P+   +N +M    ++    + +KL   M     +PDVI    LI  +     +  
Sbjct: 499 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDE 558

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +F +M +  L P V+TY+ ++ GL K   I   + +F+ M + G  P+   +N L +
Sbjct: 559 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 618

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            L K   +  ALK+  ++ D G  PD+ TYNTII G
Sbjct: 619 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 654



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 151/609 (24%), Positives = 289/609 (47%), Gaps = 66/609 (10%)

Query: 44   KTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRL 103
            K+ +   A++ F+       +PNI     V   + +  +A    D+   Q         L
Sbjct: 447  KSGDSVSALETFEKMKTKGIAPNI-----VACNASLYSLAKAGRDREAKQIFYGLKDIGL 501

Query: 104  FRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
              DS+      Y+ +++ Y ++G+IDE++++ + M +        +V  L++ L  ++ V
Sbjct: 502  VPDSV-----TYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRV 556

Query: 164  GQYYKL---CRAMRGKGFCV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
             + +K+    + M+ K   V Y  L+ GL + G I+ A  +   ++Q+G  PN +T N +
Sbjct: 557  DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 616

Query: 220  LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
               LC N ++  A  +   ++ +G  P+V T++T+I    K  ++++A   ++ M ++ +
Sbjct: 617  FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 675

Query: 280  VPDLIIYSILIDGLFKAGRLKEGNEL----LLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
             PD +    L+ G+ KAG +++  ++    L +  D+   L    +  +M + +    + 
Sbjct: 676  YPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANL---FWEDLMGSILAEAGID 732

Query: 336  RAVQTYDRML-NG------------------------------------GFLPNVISYSI 358
             AV   +R++ NG                                    G  P + +Y++
Sbjct: 733  NAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNL 792

Query: 359  LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            LI GL +   +  A  +F QV      P + TY+ L+D + KSGK+ + F +Y  M    
Sbjct: 793  LIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHE 852

Query: 419  LKPDAVVCSLLINGLM-----GDALRFFFQSVR-MTLIPNLFIFNTLMDGCCRLKRATDT 472
             +P+ +  +++I+GL+      DAL  ++  +      P    +  L+DG  +  R  + 
Sbjct: 853  CEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 912

Query: 473  VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             +LF  M  Y  +P+   + +LI G    G   +A  LF +M+K G+ PD+ TYS ++  
Sbjct: 913  KQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 972

Query: 533  LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL-TDRGLEP 591
            L     +  GLH F+ ++ +G+ PD+  YN+++N L K   L+ AL LF ++   RG+ P
Sbjct: 973  LCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITP 1032

Query: 592  DIITYNTII 600
            D+ TYN++I
Sbjct: 1033 DLYTYNSLI 1041



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 230/512 (44%), Gaps = 48/512 (9%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGK---- 176
            + G+  E+ +IF  + D+G  L PD V    +M C      + +  KL   M       
Sbjct: 481 AKAGRDREAKQIFYGLKDIG--LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEP 538

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
              V   L+N L +   ++ A+ M  ++ +    P +VT N +L  L  NG+I  A  LF
Sbjct: 539 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 598

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + ++  G  PN +TF+TL +  CK  ++  A ++   MM+M  VPD+  Y+ +I GL K 
Sbjct: 599 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 658

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G++KE        + + +  D V   +++   V  G +  A +              I  
Sbjct: 659 GQVKEA-MCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYK--------------IIA 703

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS--LIDGFCKSGK------LRDGF 408
           + L     Q   L     L G +L      + +++S   + +G C+ G       +R  F
Sbjct: 704 NFLYSCADQPANLFWE-DLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSF 762

Query: 409 S---------LYDNMIKR-GLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNL 453
                     L++   K  G++P     +LLI GL+       A   F Q      IP++
Sbjct: 763 KHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDV 822

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +N L+D   +  +  +  +++  M  +  +P+ ITH ++I G+   G++  A+ L++ 
Sbjct: 823 ATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYD 882

Query: 514 MLK-RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           ++  R  +P   TY  +I GL K   +     +F+ M   G  P+ AIYN+L+N   K  
Sbjct: 883 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAG 942

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             DAA  LF ++   G+ PD+ TY+ ++   C
Sbjct: 943 EADAACALFKRMVKEGVRPDLKTYSVLVDCLC 974



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 256/586 (43%), Gaps = 71/586 (12%)

Query: 67   IAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIG 126
            +  LI+ L ++D  D A  +F              R+    L      Y+ L+    + G
Sbjct: 543  VNSLINTLYKADRVDEAWKMF-------------MRMKEMKLKPTVVTYNTLLAGLGKNG 589

Query: 127  KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----Y 181
            KI E++E+F  M   G   +      L  CL  ++ V    K+   M   G CV     Y
Sbjct: 590  KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG-CVPDVFTY 648

Query: 182  EFLMNGLLRKGVIENA---FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA------ 232
              ++ GL++ G ++ A   FH  ++++     P+ VT   +L  +   G I +A      
Sbjct: 649  NTIIFGLVKNGQVKEAMCFFHQMKKLV----YPDFVTLCTLLPGVVKAGLIEDAYKIIAN 704

Query: 233  --------------SSLFDVLLLVGPKPNVVTFST--LINAFCKEAK------LEKAFQL 270
                            L   +L      N V+FS   + N  C++        +  +F+ 
Sbjct: 705  FLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKH 764

Query: 271  YN----------LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
             N             ++ + P L  Y++LI GL +A  ++   ++ L   + G   DV  
Sbjct: 765  NNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVAT 824

Query: 321  FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
            ++ ++DAY   G +    + Y  M      PN I+++I+I GL + G + +A  L+  ++
Sbjct: 825  YNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLM 884

Query: 381  IRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
              R   P+  TY  LIDG  KSG+L +   L++ M   G +P+  + ++LING       
Sbjct: 885  SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEA 944

Query: 435  GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
              A   F + V+  + P+L  ++ L+D  C + R  + +  F  +    + PDV+ + ++
Sbjct: 945  DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLI 1004

Query: 495  IRGIASQGSLSSAILLFFQMLK-RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
            I G+     L  A++LF +M K RG+TPD+ TY+++I  L     +     ++  ++R G
Sbjct: 1005 INGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1064

Query: 554  VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
            + P++  +N L+         + A  ++  +   G  P+  TY  +
Sbjct: 1065 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 235/499 (47%), Gaps = 46/499 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI   +R+ ++D+++EIF  M  +G+   P     ++   +D      YY       
Sbjct: 403 YNTLICGLLRVHRLDDALEIFDNMESLGV--KPTAYTYIV--FID------YYG------ 446

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                          + G   +A     ++  +G  PNIV CN  L  L   G+   A  
Sbjct: 447 ---------------KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 491

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  L  +G  P+ VT++ ++  + K  ++++A +L + M+E    PD+I+ + LI+ L+
Sbjct: 492 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLY 551

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           KA R+ E  ++ +   +  LK  VV +++++      G +  A++ ++ M+  G  PN I
Sbjct: 552 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 611

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +++ L   LC+   +  A  +  +++     P + TY+++I G  K+G++++    +  M
Sbjct: 612 TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 671

Query: 415 IKRGLKPDAV-VCSLLIN----GLMGDALR----FFFQSVRMTLIPNLFIFNTLMDGCCR 465
            K+ + PD V +C+LL      GL+ DA +    F +         NLF +  LM     
Sbjct: 672 -KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQP--ANLF-WEDLMGSILA 727

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTV-LIRGIASQGSLSSAILLFFQMLKR-GLTPDV 523
                + V     +    I  D  +  V +IR      + S A +LF +  K  G+ P +
Sbjct: 728 EAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKL 787

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ +I GL +   I +   +F  ++  G  PD+A YN LL+   K   +D   +++ +
Sbjct: 788 PTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKE 847

Query: 584 LTDRGLEPDIITYNTIICG 602
           ++    EP+ IT+N +I G
Sbjct: 848 MSAHECEPNTITHNIVISG 866



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 173/374 (46%), Gaps = 49/374 (13%)

Query: 44   KTNNPTPAIQFF-KWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQFGKTYN 99
            K NN + A   F K+T +    P +     LI  LL++DM ++A  VF    +Q   T  
Sbjct: 763  KHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF----LQVKNT-- 816

Query: 100  FFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR-- 152
                        GC      Y+FL++ Y + GKIDE  EI+  MS       P+ +    
Sbjct: 817  ------------GCIPDVATYNFLLDAYGKSGKIDELFEIYKEMS--AHECEPNTITHNI 862

Query: 153  LMSCLVDSNSVGQ----YYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
            ++S LV + +V      YY L   M  + F    C Y  L++GL + G +  A  +   +
Sbjct: 863  VISGLVKAGNVDDALDLYYDL---MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 919

Query: 205  IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
               G  PN    N ++      G+   A +LF  ++  G +P++ T+S L++  C   ++
Sbjct: 920  SDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 979

Query: 265  EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG----NELLLTALDRGLKLDVVV 320
            ++    +  + E  L PD++ Y+++I+GL K  RL+E     NE+  +   RG+  D+  
Sbjct: 980  DEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKS---RGITPDLYT 1036

Query: 321  FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
            ++S++      G V  A + Y+ +   G  PNV +++ LI+G    G+   A  ++  ++
Sbjct: 1037 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1096

Query: 381  IRRLEPSLLTYSSL 394
                 P+  TY  L
Sbjct: 1097 TGGFSPNTGTYEQL 1110



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 106/239 (44%), Gaps = 42/239 (17%)

Query: 407 GFSLYDNMIKRGLKPD---AVVCSLLINGLMGDALRFFFQSV--RMTLIPNLFIFNTLMD 461
           GFS   +MI++  KPD   + V  +L++    D+   +F+SV     L+      N +++
Sbjct: 71  GFS--GSMIRKSSKPDLSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLE 128

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL----------------- 504
                 +  +   +F LM    IK D  T+  + + ++ +G L                 
Sbjct: 129 ALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVL 188

Query: 505 ------------------SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
                             + A+ ++ +M+  G  P + TYS+++ GL K ++I   + + 
Sbjct: 189 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLL 248

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           K ME  G+ P++  + + + +L +   ++ A ++  ++ D G  PD++TY  +I   C+
Sbjct: 249 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 307



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 37/248 (14%)

Query: 27   ISDLQFNQANAILANLI----KTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDM 79
            +SD  F+        LI    K+     A Q F+   +    PN A    LI+   ++  
Sbjct: 884  MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGE 943

Query: 80   RDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMS 139
             D A  +F +MV +           R  L      YS L++    +G++DE +  F  + 
Sbjct: 944  ADAACALFKRMVKEG---------VRPDLKT----YSVLVDCLCMVGRVDEGLHYFRELK 990

Query: 140  DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM-------RGKGFCVYEFLMNGLLRK- 191
            + G  L+PD+V    + ++  N +G++++L  A+       + +G     +  N L+   
Sbjct: 991  ESG--LNPDVV--CYNLII--NGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNL 1044

Query: 192  ---GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
               G++E A  ++ ++ + G  PN+ T N +++   ++G+  +A +++  ++  G  PN 
Sbjct: 1045 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1104

Query: 249  VTFSTLIN 256
             T+  L N
Sbjct: 1105 GTYEQLPN 1112


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/591 (24%), Positives = 262/591 (44%), Gaps = 83/591 (14%)

Query: 106 DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ 165
           D LG  G  ++ LI+ Y ++  +  ++ +   M+  G+ L       L++    S     
Sbjct: 185 DGLGVVG--WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADA 242

Query: 166 YYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
            +++   M+  G       +  L+    +   IE AF ++  +++ G +P++VT + ++ 
Sbjct: 243 AWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVD 302

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK--------------------- 260
            LC +G+   A +LF  +  +G  PN VT+ T I++  K                     
Sbjct: 303 GLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAM 362

Query: 261 --------------EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
                         E K+E+A  +    +  ++ P+ + Y++L+D   +AG +    ++L
Sbjct: 363 DLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQML 422

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL--C 364
           L   ++ +  +VV FSS+++  V  G + +A     +M + G  PNV++Y  LI G   C
Sbjct: 423 LQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKC 482

Query: 365 Q---------------------------------QGRLVEACGLFGQVLIRRLEPSLLTY 391
           Q                                  G + EA  LF  +  R L    + Y
Sbjct: 483 QGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNY 542

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVR 446
           ++L+DG  K+G +     +   +++R L PDAVV ++ IN     G   +A  F  +   
Sbjct: 543 ATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRN 602

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             L P+   +NT++   CR    +  +KL   M   +IKP++IT+T L+ G+   G +  
Sbjct: 603 TGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEK 662

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L  +M   G TP  +TY  ++      ++  V L + +LM   G+  DI +YN L++
Sbjct: 663 AKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVH 722

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
           +L        A  +  ++  RG+ PD IT+N +I G+C   S  +D  F +
Sbjct: 723 VLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHC--KSSHLDNAFAT 771



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 233/470 (49%), Gaps = 8/470 (1%)

Query: 142 GIYLSPDLVQRLMSCLV-DSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHM 200
           G+ +S  LV    + LV ++ ++ +     R + G G   +  L++G  +   +  A  +
Sbjct: 152 GVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAV 211

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             ++  +G   ++V  N ++     +G    A  + + +   G +P+VVT +TLI  +CK
Sbjct: 212 VERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCK 271

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
             ++E+AF LY  M+   ++PD++  S L+DGL + GR  E   L       G+  + V 
Sbjct: 272 MKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVT 331

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           + + +D+   +  V  ++     M++ G   +++ Y+ ++  L ++G++ EA  +    L
Sbjct: 332 YCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHAL 391

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
              + P+ +TY+ L+D  C++G +     +   M ++ + P+ V  S ++NGL     + 
Sbjct: 392 SDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIA 451

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
            A  +  +     + PN+  + TL+DG  + +     + ++  M    ++ +      L+
Sbjct: 452 KAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLV 511

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK-LMERNGV 554
            G+   G++  A  LF  M +RGL  D + Y+ ++ GLFK  N+   L + + LMERN +
Sbjct: 512 NGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERN-L 570

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +PD  +YNV +N L +      A     ++ + GLEPD  TYNT+I   C
Sbjct: 571 SPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQC 620



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/565 (23%), Positives = 253/565 (44%), Gaps = 53/565 (9%)

Query: 58  THNCVS----------SPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG--------KTYN 99
           T NCV+          + NI     +LLQ + + V+ +V     I  G        K   
Sbjct: 396 TPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAG 455

Query: 100 FFRLFRDS-LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
           + R  +DS +      Y  LI+ + +    + +++++  M   G+  +  +V  L++ L 
Sbjct: 456 YMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLR 515

Query: 159 DSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
            + ++ +   L + M  +G  +    Y  LM+GL + G +  A  + +++++R   P+ V
Sbjct: 516 KNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAV 575

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
             N  +  LC  G+   A S    +   G +P+  T++T+I+A C+E    KA +L N M
Sbjct: 576 VYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEM 635

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
               + P+LI Y+ L+ GL +AG +++   LL      G     + +  V+ A  G    
Sbjct: 636 KWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSP 695

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
              ++ ++ M+  G   ++  Y+ L+  LC  G   +A  +  ++L R + P  +T+++L
Sbjct: 696 YVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNAL 755

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           I G CKS  L + F+ Y  M+ +GL                               PN+ 
Sbjct: 756 ILGHCKSSHLDNAFATYAQMLHQGLS------------------------------PNIA 785

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            FNTL+ G     R  +   +   M    ++P+ +T+ +L+ G A + +   A+ L+ +M
Sbjct: 786 TFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEM 845

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           + +G  P   TY+++I    K   ++    +F  M+R GV    + Y++LLN   K  N 
Sbjct: 846 VSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNG 905

Query: 575 DAALKLFGQLTDRGLEPDIITYNTI 599
                L   + + G +P   T +++
Sbjct: 906 TEVRILLKDMKELGFKPSKGTISSM 930



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/599 (22%), Positives = 268/599 (44%), Gaps = 24/599 (4%)

Query: 29  DLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVA----- 83
           D +F++A A+   + K       + +  +  +      + + + +L +   R VA     
Sbjct: 307 DGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVM 366

Query: 84  -SHVFDKMVIQFGKTYNFFRLFRDSLGD---FGC-DYSFLIENYVRIGKIDESVEIFAYM 138
            + V D++  + GK      + R +L D     C  Y+ L++ + R G ID + ++   M
Sbjct: 367 YTTVMDRLGKE-GKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQM 425

Query: 139 SDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKG 192
            +  +  SP++V    +++ LV    + +     R M+  G       Y  L++G  +  
Sbjct: 426 EEKSV--SPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQ 483

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
             E A  ++R ++  G   N    + ++  L  NG I  A +LF  +   G   + V ++
Sbjct: 484 GQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYA 543

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           TL++   K   +  A ++   +ME +L PD ++Y++ I+ L + G+  E    L    + 
Sbjct: 544 TLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNT 603

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           GL+ D   +++++ A    G+  +A++  + M      PN+I+Y+ L+ GL + G + +A
Sbjct: 604 GLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKA 663

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN- 431
             L  ++      P+ LTY  ++     S        +++ M+  GL  D  V + L++ 
Sbjct: 664 KYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHV 723

Query: 432 ----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
               G+   A     + +   + P+   FN L+ G C+     +    +  M    + P+
Sbjct: 724 LCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPN 783

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           + T   L+ G+ S G +  A  +  +M K GL P+ +TY  ++ G  K  N    L ++ 
Sbjct: 784 IATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYC 843

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            M   G  P  + YN L++   K   ++ A +LF ++  RG+     TY+ ++ G+  L
Sbjct: 844 EMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKL 902



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 208/475 (43%), Gaps = 66/475 (13%)

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP-N 247
           LR G +  A H+   V      P      +++  L  +G +  AS          P P +
Sbjct: 30  LRAGRLSAASHV---VSSLPAPPPARLLRRLIPALASSGLVAAASRFR-------PVPGD 79

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMM--EMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
            +T +++I ++C    L  A  L       +  +  D + Y+I + GL + G  +    +
Sbjct: 80  PLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPV 139

Query: 306 LLTALDRGLKLD-------------------------------------VVVFSSVMDAY 328
           L     RG+  D                                     VV +++++D Y
Sbjct: 140 LSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGY 199

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             + D+  A+   +RM   G   +V+ Y+ L+ G    G    A  +  ++    +EPS+
Sbjct: 200 CKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSV 259

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQ 443
           +T+++LI  +CK  ++ + F+LY+ M++ G+ PD V  S L++GL  D     A   F +
Sbjct: 260 VTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFRE 319

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
             ++ + PN   + T +D   +++R  +++ L   M    +  D++ +T ++  +  +G 
Sbjct: 320 MDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGK 379

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A  +    L   +TP+ +TY+ ++    +  NI     M   ME   V+P++  ++ 
Sbjct: 380 IEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSS 439

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
           +LN L+K   +  A     ++ D G+ P+++TY T           LIDG+FK Q
Sbjct: 440 ILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGT-----------LIDGFFKCQ 483



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 45/202 (22%)

Query: 173 MRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G+G        N L+    +   ++NAF  + Q++ +G  PNI T N +L  L   G+
Sbjct: 740 MLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGR 799

Query: 229 IGNASSL---------------FDVLLLVGPK--------------------PNVVTFST 253
           IG A ++               +D+L+    K                    P   T+++
Sbjct: 800 IGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNS 859

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE---LLLTAL 310
           LI+ F K   + +A +L++ M    ++     Y IL++G  K   L+ G E   LL    
Sbjct: 860 LISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSK---LRNGTEVRILLKDMK 916

Query: 311 DRGLKLDVVVFSSVMDAYVGIG 332
           + G K      SS+  A+   G
Sbjct: 917 ELGFKPSKGTISSMSRAFSKPG 938


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 212/427 (49%), Gaps = 5/427 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++N   + G I  A     ++ Q G  P+  T   ++   C N  + +A  +F+++   G
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + N V+++T+I+  C+  ++++   L+  M E D  P +  Y+++I  LF   R  EG 
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L     +R  + +V  ++ ++DA      +  + +  + M+  G +P+V++Y+ LI+G 
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++GR+  A  + G +      P+  TY+ LI GF K   +    +L   M++  L P  
Sbjct: 400 CEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  + LI+     G    A +         L+P+ + ++  +D  C+ KR  +   LF  
Sbjct: 460 VTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNS 519

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +    IK + + +T LI G    G +  AI L  +M      P+  TY+++I+G+ K   
Sbjct: 520 LKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGK 579

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +  GL M + M + GV P +A Y +L+  +++E + D A ++F Q+   G +PD+ TY  
Sbjct: 580 VQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTA 639

Query: 599 IICGYCS 605
            I  YC+
Sbjct: 640 FIHTYCT 646



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 196/425 (46%), Gaps = 9/425 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I      G+IDE + +F  M +   Y +      ++  L  ++   +   L   MR
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMR 346

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  +++ + ++  ++ +  +  +++++G VP++VT N +++  C  G+I 
Sbjct: 347 ERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIE 406

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +  ++     +PN  T++ LI  F K   + KA  L + M+E  L P L+ Y+ LI
Sbjct: 407 AALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLI 466

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
               KAG      +LL    + GL  D   +S  +D       +  A   ++ +   G  
Sbjct: 467 HVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIK 526

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            N + Y+ LI G C+ G++ EA  L  ++      P+  TY+SLI G CK GK+++G S+
Sbjct: 527 ANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSM 586

Query: 411 YDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            +NM K G+KP     ++LI  ++  GD   A R F Q V     P+++ +   +   C 
Sbjct: 587 VENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCT 646

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                +   +   M    + PD +T+T+LI      G    A  +  +ML  G  P    
Sbjct: 647 SGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPI 706

Query: 526 YSAII 530
           ++ +I
Sbjct: 707 WNNLI 711


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 235/517 (45%), Gaps = 56/517 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM- 173
           Y  L+  +++  +      I   M   G   +P L   L+    ++      YKL   M 
Sbjct: 309 YRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMT 368

Query: 174 ---RGKGFCVYEFLMNGLLRKGVIENAF------HMHRQVIQRGFVPNIVTCNKILKRLC 224
                 G+  Y   +  +  +  + NA        ++ +++    V N V      + LC
Sbjct: 369 TCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLC 428

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   A  +   ++  G  P+  T++ +I   C+  K+EK+F L+  M    + PD+ 
Sbjct: 429 GVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVY 488

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ILID   KAG +++           G   +VV +++++ AY+    + +A   + RM
Sbjct: 489 TYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRM 548

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL----------------IRRLEPSL 388
           ++    PN ++YS LI GLC+ G + +AC ++ +++                   + P++
Sbjct: 549 VDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNV 608

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT 448
           +TY +LIDG CK+ K+ D   L D M+  G +P+ +V                       
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIV----------------------- 645

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
                  ++ L+DG C++ +  +  ++F+ M      P V T+T LI  +   G L  A+
Sbjct: 646 -------YDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +  +ML     P+V+TY+A+I GL K   I   L++  LME  G +P++  Y  L++ L
Sbjct: 699 KVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGL 758

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            K    DA+LKLF Q+  +G  P+ +TY  +I   C+
Sbjct: 759 GKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCA 795



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/551 (23%), Positives = 227/551 (41%), Gaps = 69/551 (12%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L+    R G  DE++E    + D G   S      L+  L  +  V   +++ + M   G
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234

Query: 178 FCV---------------------------YEF---------LMNGLLRKGVIENAFHMH 201
           FC+                            +F         +++GL+   +   A    
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFL 294

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            ++     +PN+VT   +L       Q G    + ++++  G  PN   F++L++ +C  
Sbjct: 295 HRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNA 354

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN---------ELLLTALDR 312
                A++L+N M      P  + Y+I I  +     L             E +L A   
Sbjct: 355 GDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCV 414

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
             K++   FS  +    G+G   +A Q    M+  GF+P+  +Y+ +I  LCQ  ++ ++
Sbjct: 415 LNKVNTANFSRCL---CGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKS 471

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             LF ++    + P + TY+ LID FCK+G +    S +D M   G  P+ V  + L++ 
Sbjct: 472 FLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHA 531

Query: 433 LMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF-MLMGMY---- 482
            +       A   F + V     PN   ++ L+DG C+        +++  L+G      
Sbjct: 532 YLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVE 591

Query: 483 -----------NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
                       I P+V+T+  LI G+     +S A  L   ML  G  P+ I Y A+I 
Sbjct: 592 SDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALID 651

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G  K   I     +F  M + G  P +  Y  L++ + K+  LD A+K+  ++ +    P
Sbjct: 652 GFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNP 711

Query: 592 DIITYNTIICG 602
           +++TY  +I G
Sbjct: 712 NVVTYTAMIDG 722



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 220/491 (44%), Gaps = 59/491 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+++ + G I+++   F  M  +G   SP++V                        
Sbjct: 490 YTILIDSFCKAGLIEQARSWFDEMRSVGC--SPNVV------------------------ 523

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++  L+   +  A  +  +++     PN VT + ++  LC  G+I  A  
Sbjct: 524 -----TYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACE 578

Query: 235 LFDVLLLVGPK----------------PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           +++ L+                     PNVVT+  LI+  CK  K+  A +L + M+   
Sbjct: 579 VYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAG 638

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             P+ I+Y  LIDG  K G++    E+ L     G    V  ++S++D     G +  A+
Sbjct: 639 CEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           +    MLN    PNV++Y+ +I GL + G + +A  L   +  +   P+++TY++LIDG 
Sbjct: 699 KVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGL 758

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIP-N 452
            K+GK      L+  M  +G  P+ V   +LIN     GL+ +A       ++ T  P +
Sbjct: 759 GKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEA-HLLLDEMKHTHWPKH 817

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           L  ++  + G    K+   ++ L   M  +   P    + +LI   +  G L +A+ L  
Sbjct: 818 LQGYHCAVQGFS--KKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHK 875

Query: 513 QMLKRGLTPDVIT---YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           ++++   + ++ +   Y+++I  L     +     ++  M R G+ PD+ ++  L+  LI
Sbjct: 876 ELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLI 935

Query: 570 KECNLDAALKL 580
           +    D AL+L
Sbjct: 936 EVNKWDEALQL 946



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/457 (21%), Positives = 192/457 (42%), Gaps = 36/457 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+  L   G +E  F + +++   GF  +  T     + LC   ++G  +   ++L
Sbjct: 206 TYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALC---KVGRWADALNML 262

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                  + V  + +I+   + +   +A    + M     +P+++ Y  L+ G  K  + 
Sbjct: 263 EKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQF 322

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                ++   +  G   +  +F+S++  Y   GD   A + ++RM   G  P  ++Y+I 
Sbjct: 323 GWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIF 382

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG---------FCKSGKLRDGFSL 410
           I  +C Q  L  A  L    L+ ++   +L  S +++           C  GK    F +
Sbjct: 383 IGSICGQEELPNAELL---DLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQI 439

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M+++G  PD    + +I  L     +  +   F +  R  + P+++ +  L+D  C+
Sbjct: 440 LKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCK 499

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                     F  M      P+V+T+T L+        L  A  +F +M+     P+ +T
Sbjct: 500 AGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVT 559

Query: 526 YSAIIHGLFKGKNISVGLHMF-KLMERNG---------------VAPDIAIYNVLLNMLI 569
           YSA+I GL K   I     ++ KL+  +G               +AP++  Y  L++ L 
Sbjct: 560 YSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLC 619

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           K   +  A +L   +   G EP+ I Y+ +I G+C +
Sbjct: 620 KAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKI 656



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/402 (22%), Positives = 164/402 (40%), Gaps = 20/402 (4%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N +++R C +G    A      L   G +P+ VT++ L+       ++E  F++   M  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
                D          L K GR  +   +L         LD V+ + ++   +       
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLEK---EDFNLDTVLCTQMISGLMEASLFNE 289

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+    RM     +PNV++Y  L+ G  ++ +      +   ++     P+   ++SL+ 
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVH 349

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD------ALRFFFQSVRMTLI 450
           G+C +G     + L++ M   G  P  V  ++ I  + G        L    + V   ++
Sbjct: 350 GYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEML 409

Query: 451 P--------NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                    N   F+  + G  + ++A   +K  M  G     PD  T+T +I  +    
Sbjct: 410 AASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFV---PDTSTYTKVITFLCQAK 466

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  + LLF +M + G+ PDV TY+ +I    K   I      F  M   G +P++  Y 
Sbjct: 467 KVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYT 526

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            LL+  +K   L  A  +F ++ D    P+ +TY+ +I G C
Sbjct: 527 ALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLC 568


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 240/493 (48%), Gaps = 11/493 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+    R  ++ E+VE+   M + GI       + L+     +  +    ++   M 
Sbjct: 233 YNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDML 292

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
              F        F+++GL ++G I+ AF +   + + G VPN+  CN ++ +LC + +  
Sbjct: 293 SLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFR 352

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF  +   G +PN VT++ LI++ CK   ++ A  +++ M E  +   +  Y+ LI
Sbjct: 353 EAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLI 412

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G  +     +   LL   +++GL      +S ++      GD+  A++ +  M   G  
Sbjct: 413 NGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVS 472

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            NV +++ LI G C+ G + EA  LF +++   + P+ +T++ +I+G+C+ G +R  F L
Sbjct: 473 GNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQL 532

Query: 411 YDNMIKRGLKPDAVVCSLLIN------GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           YD M+ RGL PD      LI+      G M  A  F        ++ N F   TLM G C
Sbjct: 533 YDQMVDRGLTPDNYTYRSLISVLCLTLGAM-KAKEFVDDLENNCVVLNSFSLTTLMYGFC 591

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  R T+T  ++  M    +K D+I+ TV++             +LF +M ++G+ PD +
Sbjct: 592 KEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNV 651

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            ++ +I    K +NI   L+ +  M  +G +P++  Y VL+N L K   L +A  L  ++
Sbjct: 652 FHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEM 711

Query: 585 TDRGLEPDIITYN 597
                 P+  TYN
Sbjct: 712 LVGRFLPNSFTYN 724



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 195/400 (48%), Gaps = 5/400 (1%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            +G   + V  N ++  LC N ++  A  + + ++  G   + VT+ TL+  FC+  +LE
Sbjct: 223 SKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELE 282

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
            A ++ + M+ +  VP +   S ++DGL K G + +   L     + G+  ++   ++++
Sbjct: 283 MALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALI 342

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           D          A + +  M N G  PN ++Y+ILI  LC++G + +A  +F ++  + + 
Sbjct: 343 DKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIR 402

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
            ++  Y+SLI+G+C+         L + M+++GL P A   S LI GL     +  A+  
Sbjct: 403 VTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMEL 462

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             +  R  +  N++ F TL+ G C+     +  +LF  M   ++ P+ +T  V+I G   
Sbjct: 463 HREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCR 522

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G++  A  L+ QM+ RGLTPD  TY ++I  L               +E N V  +   
Sbjct: 523 VGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFS 582

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              L+    KE  L     ++ ++  RG++ D+I++  I+
Sbjct: 583 LTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIV 622



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 219/486 (45%), Gaps = 54/486 (11%)

Query: 102 RLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
           RLFR  + + G +     Y+ LI +  + G +D+++ +F  M + GI ++      L++ 
Sbjct: 356 RLFR-GMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLING 414

Query: 157 LVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
               ++  Q   L   M  KG       Y  L+ GL RKG + +A  +HR++ + G   N
Sbjct: 415 YCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGN 474

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           + T   ++   C +G +  A+ LFD ++     PN VTF+ +I  +C+   + KAFQLY+
Sbjct: 475 VYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYD 534

Query: 273 LMMEMDLVPDLIIYSILID-----------------------------------GLFKAG 297
            M++  L PD   Y  LI                                    G  K G
Sbjct: 535 QMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEG 594

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           RL E   +      RG+KLD++ F+ ++ A + + D  +    +  M   G  P+ + ++
Sbjct: 595 RLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHT 654

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I    ++  +V+A   + +++     P+++TY+ LI+  CKSG L     L + M+  
Sbjct: 655 CMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVG 714

Query: 418 GLKPDAVVCSLLINGLMGDA----LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
              P++   +  ++ L  +      +    ++    + N   FNTL+ G C+  +    +
Sbjct: 715 RFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAI 774

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI---- 529
            L          PD I+++ +I  +   G ++ A  L+ +ML +GL PD++ Y+ +    
Sbjct: 775 DLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWC 834

Query: 530 -IHGLF 534
            IHG F
Sbjct: 835 NIHGEF 840



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 164/331 (49%), Gaps = 40/331 (12%)

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           LD  V+++ + AY  I ++  A     RM + G   + + Y++L+ GLC+  R++EA  +
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
              ++ R +    +TY +L+ GFC++ +L     + D+M+     P    CS +++GL  
Sbjct: 253 KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRK 312

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              +  A R       + ++PNLF  N L+D  C+ +R  +  +LF  M    ++P+ +T
Sbjct: 313 RGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVT 372

Query: 491 HTVLIRGIASQGSLSSAILLF-----------------------------------FQML 515
           + +LI  +  +G +  A+ +F                                    +M+
Sbjct: 373 YAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMV 432

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           ++GL P   +YS +I GL +  +++  + + + M RNGV+ ++  +  L++   K+ N+D
Sbjct: 433 EKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMD 492

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            A +LF ++ D  + P+ +T+N +I GYC +
Sbjct: 493 EAARLFDKMIDSSVVPNEVTFNVMIEGYCRV 523



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/445 (21%), Positives = 182/445 (40%), Gaps = 53/445 (11%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHV--FD 88
            F+QA  +L  +++      A  +           ++A  + +  +     V+ +V  F 
Sbjct: 420 NFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFT 479

Query: 89  KMVIQFGKTYN-------FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
            ++  F K  N       F ++   S+      ++ +IE Y R+G + ++ +++  M D 
Sbjct: 480 TLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDR 539

Query: 142 GIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIE 195
           G  L+PD    + L+S L  +    +  +    +      +  F    LM G  ++G + 
Sbjct: 540 G--LTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLT 597

Query: 196 NAFH-----------------------------------MHRQVIQRGFVPNIVTCNKIL 220
             +H                                   + R++ ++G  P+ V    ++
Sbjct: 598 ETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMI 657

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
                   I  A + +D ++  G  PNVVT++ LIN  CK   L  A  L   M+    +
Sbjct: 658 DVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFL 717

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+   Y+  +D L   G L++   L  T L+ G   + V F++++  +   G +  A+  
Sbjct: 718 PNSFTYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDL 776

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
                  GF P+ ISYS +I  LC+ G + +A  L+ ++L + L+P ++ Y+ LI     
Sbjct: 777 MQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNI 836

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVV 425
            G+   G  +Y +M+      D  V
Sbjct: 837 HGEFDKGLGIYSDMVNLKYADDTPV 861


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 199/396 (50%), Gaps = 10/396 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV- 238
            Y  L+ G      ++ AF + R++   G   N  T + IL+ LC  G++  A   FD  
Sbjct: 27  TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDAS 86

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM-DLVPDLIIYSILIDGLFKAG 297
           L L   +P+VV+++TLIN  CK  +++ AF L+  M+      P+   Y+ L+DGL K  
Sbjct: 87  LELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           RL     ++  A  R    DVV ++++M A   +G V  A+ T+ +M   G++P ++S++
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFN 206

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I GLC+  RL +A  +F +++ R   P+L+TYS +IDG CKS +L +   L D M+  
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 266

Query: 418 GLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G +PD V  + L+      G +  AL    + V    IP++  +  ++D  C++ R  D 
Sbjct: 267 GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDA 326

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            ++F  +      P+V+T++ LI G      +     +  +M  R   P+V+TY+ +I G
Sbjct: 327 HEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWG 383

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           L           MF+ M   G  PD   Y  L   L
Sbjct: 384 LSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 186/361 (51%), Gaps = 10/361 (2%)

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           VT++ LI  FC  + L+ AF L   M    +  +    SI++ GL + GR+ +  E    
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 309 ALDRG-LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQ 366
           +L+    + DVV ++++++    +G V  A   + +M+  GG  PN  +Y+ L+ GLC+Q
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
            RL  A  +  +   R   P ++TY++L+    + G++ +  + +  M + G  P  V  
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + +I GL     + DAL  F + +     PNL  ++ ++DG C+  +  +  +L   M  
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
              +PD++ +T L+ G ++ G L SA+ L  +M+ +G  PDV+TY+ +I  L K   +  
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDD 325

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
              +F+ +  N  +P++  Y+ L+    +   +D   K+  ++  R   P+++TYNT+I 
Sbjct: 326 AHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIW 382

Query: 602 G 602
           G
Sbjct: 383 G 383



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 162/328 (49%), Gaps = 7/328 (2%)

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + Y++LI G   A  L     LL      G++ +    S ++      G V +A++ +D 
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 344 MLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQ-VLIRRLEPSLLTYSSLIDGFCKS 401
            L      P+V+SY+ LI GLC+ GR+  A  LF + V      P+  TY++L+DG CK 
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
            +L    ++     KR   PD V  + L+  L     + +AL  F Q      +P L  F
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N ++ G CR +R  D +++F  M   +  P+++T++V+I G+     L  A  L  +M+ 
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G  PD++ Y+ ++ G      +   L + + M   G  PD+  Y V+++ L K   +D 
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDD 325

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A ++F +L      P+++TY+ +I GYC
Sbjct: 326 AHEIFRELVANKCSPNVVTYSALIGGYC 353



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 195/390 (50%), Gaps = 41/390 (10%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           S +++   R G++ +++E F    ++  +  PD+V    L++ L     V   + L R M
Sbjct: 64  SIILQGLCRCGRVAQALEHFDASLELA-HAQPDVVSYTTLINGLCKLGRVDAAFDLFRKM 122

Query: 174 RGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
              G C      Y  L++GL ++  ++ A  +  +  +R F P++VT N ++  L   G+
Sbjct: 123 VAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGR 182

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A + F  +   G  P +V+F+ +I   C+  +L  A +++N M++ D  P+L+ YS+
Sbjct: 183 VDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSV 242

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +IDGL K+ +L E  +LL   +  G + D+V ++ ++  +   G +  A+    RM++ G
Sbjct: 243 VIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG 302

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            +P+V++Y+++I  LC+ GR+ +A  +F +++  +  P+++TYS+LI G+C++ ++ +G 
Sbjct: 303 CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG- 361

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
                                     G  +R       M   PN+  +NT++ G   + R
Sbjct: 362 --------------------------GKVMR------EMACRPNVVTYNTMIWGLSMVDR 389

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             +   +F  M      PD  T+  L R +
Sbjct: 390 NEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 143/300 (47%), Gaps = 7/300 (2%)

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L    V ++ ++  +    D+  A      M   G   N  + SI+++GLC+ GR+ +A 
Sbjct: 21  LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQAL 80

Query: 374 GLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG-LKPDAVVCSLLIN 431
             F   L +   +P +++Y++LI+G CK G++   F L+  M+  G  +P+A   + L++
Sbjct: 81  EHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVD 140

Query: 432 GLMG----DALRFFFQSVR-MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           GL      DA R      R     P++  +NTLM    +L R  + +  F  M      P
Sbjct: 141 GLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVP 200

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
            +++   +I G+     L+ A+ +F +M+ R   P+++TYS +I GL K   +     + 
Sbjct: 201 TLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             M   G  PD+  Y  L+        LD+AL L  ++  +G  PD++TY  +I   C +
Sbjct: 261 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 7/229 (3%)

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
           +L  S +TY+ LI GFC +  L   FSL   M   G++ +    S+++ GL     +  A
Sbjct: 20  QLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQA 79

Query: 438 LRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLM-GMYNIKPDVITHTVLI 495
           L  F  S+ +    P++  + TL++G C+L R      LF  M      +P+  T+  L+
Sbjct: 80  LEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALV 139

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G+  Q  L +A  +  +  KR   PDV+TY+ ++  LF+   +   L  F  M   G  
Sbjct: 140 DGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYV 199

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           P +  +N ++  L +   L  AL++F ++ DR   P+++TY+ +I G C
Sbjct: 200 PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLC 248



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 143/313 (45%), Gaps = 16/313 (5%)

Query: 93  QFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G+    F LFR  +   GC      Y+ L++   +  ++D +  +           +P
Sbjct: 108 KLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRD--FAP 165

Query: 148 DLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMH 201
           D+V    LM+ L     V +       M  +G+      +  ++ GL R   + +A  + 
Sbjct: 166 DVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVF 225

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            ++I R F PN+VT + ++  LC + Q+  A  L D ++  G +P++V ++ L+  F   
Sbjct: 226 NEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAA 285

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            +L+ A  L   M+    +PD++ Y+++ID L K GR+ + +E+    +      +VV +
Sbjct: 286 GRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTY 345

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           S+++  Y     V    +    M      PNV++Y+ +I GL    R  EA G+F ++  
Sbjct: 346 SALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSE 402

Query: 382 RRLEPSLLTYSSL 394
               P   TY  L
Sbjct: 403 CGFVPDARTYRGL 415



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 64/281 (22%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           NAI+  L +      A++ F    +    PN+     +I  L +SD  D A  + D+MV 
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           +                  GC      Y+ L+  +   G++D ++ +   M   G    P
Sbjct: 266 E------------------GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCI--P 305

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           D+V                              Y  +++ L + G +++A  + R+++  
Sbjct: 306 DVV-----------------------------TYTVVIDKLCKVGRVDDAHEIFRELVAN 336

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
              PN+VT + ++   C   ++        V+  +  +PNVVT++T+I       + E+A
Sbjct: 337 KCSPNVVTYSALIGGYCRASRVDEGGK---VMREMACRPNVVTYNTMIWGLSMVDRNEEA 393

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           + ++  M E   VPD   Y     GL +A R+ +    +LT
Sbjct: 394 YGMFREMSECGFVPDARTYR----GLKRALRMIDQPPHVLT 430


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 238/494 (48%), Gaps = 10/494 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L++ Y   G +  ++ +   +S+ G+  +      L+     + ++ + ++    M+ KG
Sbjct: 269 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 328

Query: 178 F--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
               VY    ++ G L+    +NAF M    ++ G   N+ T N +L  LC  G++  A 
Sbjct: 329 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEAC 387

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           +L+D ++  G  PNVV+++ +I   C++  +  A ++Y  M++    P+ + ++IL+DG 
Sbjct: 388 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 447

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
           FK G ++    +     D  +         ++      G        +++ ++ GF+P  
Sbjct: 448 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 507

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           + Y+ +I G  ++G +  A  ++ ++    + PS +TY+SLIDGFCK   +     L ++
Sbjct: 508 MPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND 567

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M ++GLK D      LI+G      M  A     +     L PN FI+N+++ G   +  
Sbjct: 568 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 627

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             + + L+  M    I  D+ T+T LI G+   G L  A  +  +ML +G+ PD   ++ 
Sbjct: 628 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTV 687

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+GL           + + M    + P + IYN L+    KE NL  A +L  ++ DRG
Sbjct: 688 LINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRG 747

Query: 589 LEPDIITYNTIICG 602
           L PD ITY+ ++ G
Sbjct: 748 LVPDNITYDILVNG 761



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 138/582 (23%), Positives = 267/582 (45%), Gaps = 42/582 (7%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +++ I   L + ++PT A+++F+     +        + +LL        +H    +  Q
Sbjct: 81  ESHVINTLLNRKSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETHRAQYLFDQ 140

Query: 94  F--GKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           F  GK+  F  L  D L +    Y+F ++  ++ G I E+ + F      G+ L  +   
Sbjct: 141 FASGKSVRFSCLM-DRLVECTKLYNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYS 197

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
             +  L    + G    L R MR  G+                               +P
Sbjct: 198 IFVHLLCLKPNSGYALSLLREMRAAGW-------------------------------IP 226

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
              T   ++      G +  A  L D ++  G   N+   ++L+  +C +  L  A  L 
Sbjct: 227 PEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLV 286

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           N + E  LVP+ + YS+LIDG  K G +++  E       +G++  V   +S+++ Y+  
Sbjct: 287 NEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKC 346

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
                A   ++  L  G L NV +++ L+  LC++G++ EAC L+ +V+ + + P++++Y
Sbjct: 347 QSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSY 405

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVR 446
           +++I G C+   +     +Y  M+  G  P+AV  ++L++G    GD   A   F +   
Sbjct: 406 NNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKD 465

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             ++P       ++ G C+  R+ +   LF         P  + +  +I G   +G+++ 
Sbjct: 466 ANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINL 525

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  ++ +M + G+TP  +TY+++I G  KG NI + L +   M+R G+  DI  Y  L++
Sbjct: 526 ASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID 585

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
              K  ++ +A +L  +L   GL P+   YN++I G+ ++N+
Sbjct: 586 GFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 627



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 212/429 (49%), Gaps = 6/429 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++G  + G IE AF  + ++  +G   ++ + N IL+         NA ++F+  
Sbjct: 300 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA 359

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   NV TF+TL++  CKE K+ +A  L++ ++   + P+++ Y+ +I G  +   +
Sbjct: 360 LESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 418

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               ++    LD G   + V F+ +MD Y   GD+  A   + RM +   LP   +  I+
Sbjct: 419 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 478

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKGLC+ GR  E   LF + + +   P+ + Y+++IDGF K G +    ++Y  M + G+
Sbjct: 479 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 538

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P  V  + LI+G         AL+      R  L  ++  + TL+DG C+ +      +
Sbjct: 539 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 598

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   +    + P+   +  +I G  +  ++  AI L+ +M+  G+  D+ TY+++I GL 
Sbjct: 599 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 658

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +     +   M   G+ PD   + VL+N L  +   + A K+   +  + + P ++
Sbjct: 659 KSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVL 718

Query: 595 TYNTIICGY 603
            YNT+I G+
Sbjct: 719 IYNTLIAGH 727



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 242/547 (44%), Gaps = 63/547 (11%)

Query: 9   LTVWRSINKCYCSESKTHISDLQFNQANA-ILANLIKTNNPTP-AIQFFKWTHNCVSSPN 66
           L V  S+ K YC         +Q N  +A +L N I  +   P  + +      C  + N
Sbjct: 263 LAVATSLMKGYC---------MQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGN 313

Query: 67  IAQLIHVLLQSDMRDVASHVFDKMVIQFG-----KTYNFFRLFRDSLGDFGCD---YSFL 118
           I +      +   + + S V+    I  G        N F +F D+L     +   ++ L
Sbjct: 314 IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTL 373

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR----LMSCLVDS-NSVGQYYKLCRAM 173
           +    + GK++E+  ++  +   GI  SP++V      L  C  D+ N+  + YK    M
Sbjct: 374 LSWLCKEGKMNEACNLWDEVIAKGI--SPNVVSYNNIILGHCRKDNINAACKVYK---EM 428

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              GF      +  LM+G  +KG IENAF +  ++     +P   T   I+K LC  G+ 
Sbjct: 429 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
                LF+  +  G  P  + ++T+I+ F KE  +  A  +Y  M E+ + P  + Y+ L
Sbjct: 489 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 548

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDG  K   +    +LL     +GLK+D+  + +++D +    D+  A +  + +   G 
Sbjct: 549 IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGL 608

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            PN   Y+ +I G      + EA  L+ +++   +   L TY+SLIDG  KSG+L     
Sbjct: 609 SPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASD 668

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           ++  M+ +G+ PD    ++LINGL                              C   + 
Sbjct: 669 IHTEMLSKGILPDDRAHTVLINGL------------------------------CNKGQF 698

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  K+   M   N+ P V+ +  LI G   +G+L  A  L  +ML RGL PD ITY  +
Sbjct: 699 ENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDIL 758

Query: 530 IHGLFKG 536
           ++G FKG
Sbjct: 759 VNGKFKG 765


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 145/577 (25%), Positives = 269/577 (46%), Gaps = 50/577 (8%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG 95
           N++L   I++N    A  FF +      SPN+ Q  ++L++   +            QF 
Sbjct: 118 NSMLNAFIESNQWREAELFFTYFQTAGMSPNL-QTYNILIKISCKKR----------QFE 166

Query: 96  KTYNFFR-LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM 154
           K       +F + L      Y  LI    + G + ++VE+F  MS  G+  +PD++    
Sbjct: 167 KGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGV--NPDVM---- 220

Query: 155 SCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNI 213
                                     Y  L++G LRKG    A  + ++++    V P++
Sbjct: 221 -------------------------CYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSV 255

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T N ++  LC  G++  +  +++ +      P++ TFS++I+   K      A +++  
Sbjct: 256 ETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQE 315

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M+E  L PD+  Y+ ++ GLF+ G+L +  EL    + +    ++V ++ ++   +    
Sbjct: 316 MIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW-NVMSKNNCCNIVSYNMLIQGLLDNKK 374

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           V +A+  +  +   G   +  +Y +LI GLC+ G L +A  +  +      +     YSS
Sbjct: 375 VEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSS 434

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           ++ G CK G L     L   M K   K ++ V + LING      + +A+    +     
Sbjct: 435 MVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKD 494

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
             P +  +NT+++G C+ +R +D       M    +KPD+IT+++LI G+     +  A+
Sbjct: 495 CAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMAL 554

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L+ Q + + L PD+  ++ IIHGL   + + V L +F  M +    PD+  +N ++  L
Sbjct: 555 NLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGL 614

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            K  +   ALK++ ++ + GL+PDII+YN    G CS
Sbjct: 615 YKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCS 651



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 258/532 (48%), Gaps = 34/532 (6%)

Query: 103 LFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           LF++ +  FGC+     ++ ++  ++   +  E+   F Y    G  +SP+L  +  + L
Sbjct: 100 LFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAG--MSPNL--QTYNIL 155

Query: 158 VDSNSVGQYYKLCRAMRGKGFCVYEF-------------LMNGLLRKGVIENAFHMHRQV 204
           +  +   + ++     +GKG   + F             L+N L + G + +A  +  ++
Sbjct: 156 IKISCKKRQFE-----KGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEM 210

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAK 263
             RG  P+++  N ++      G    A+ ++  LL      P+V T++ +IN  CK  K
Sbjct: 211 SVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGK 270

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L+++ +++N M + +  PDL  +S +I GL KAG      ++    ++ GL  DV  +++
Sbjct: 271 LDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNA 330

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++      G + +  + ++ M       N++SY++LI+GL    ++ +A   +  +  R 
Sbjct: 331 MLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAICYWQLLHERG 389

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           L+    TY  LI+G CK+G L     + +     G   D    S +++GL     +  A+
Sbjct: 390 LKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAV 449

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
               Q  +     N  +FN+L++G  R  +  + + +   M   +  P V+++  +I G+
Sbjct: 450 ELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGL 509

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                 S A L   +ML+ GL PD+ITYS +I GL +G+ + + L+++       + PD+
Sbjct: 510 CKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDL 569

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
            ++N++++ L     +D AL++F Q+      PD++T+NTI+ G      C+
Sbjct: 570 QMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCV 621



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 254/513 (49%), Gaps = 26/513 (5%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LI+ L +S     A  +FD+M +            R    D  C Y+ LI+ ++R G   
Sbjct: 190 LINALAKSGNLLDAVELFDEMSV------------RGVNPDVMC-YNILIDGFLRKGDFV 236

Query: 130 ESVEIFAYM-SDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLCRAMRGKGFCVYEFL 184
           ++ EI+  + ++  +Y S +    +++ L        S+  + ++ +  +      +  +
Sbjct: 237 KANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSM 296

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           ++GL + G    A  + +++I+ G  P++ T N +L  L   G++     L++V+     
Sbjct: 297 IHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMS-KNN 355

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
             N+V+++ LI       K+E+A   + L+ E  L  D   Y +LI+GL K G L +   
Sbjct: 356 CCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALR 415

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +L  A + G  LD   +SS++      G + +AV+   +M       N   ++ LI G  
Sbjct: 416 ILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYV 475

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           +  +L EA  +  ++  +   P++++Y+++I+G CK+ +  D +     M++ GLKPD +
Sbjct: 476 RAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMI 535

Query: 425 VCSLLINGL-MGD----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             SLLI+GL  G+    AL  + Q +   L P+L + N ++ G C  ++    +++F  M
Sbjct: 536 TYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQM 595

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              N  PD++TH  ++ G+   G    A+ ++ ++L+ GL PD+I+Y+    GL     +
Sbjct: 596 RQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARV 655

Query: 540 SVGLH-MFKLMERNGVAPDIAIYNVLLNMLIKE 571
           S  +  ++  ++R G+ P+   +NVL+  ++ +
Sbjct: 656 SDAIEFLYDALDR-GILPNAPTWNVLVRAVVDD 687



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 214/434 (49%), Gaps = 14/434 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I    ++GK+DES+E++  M       SPDL     ++  L  + +     K+ + 
Sbjct: 258 YNIMINGLCKLGKLDESMEMWNRMKKNE--KSPDLFTFSSMIHGLSKAGNFNAAEKVFQE 315

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  +++GL R G +   F +   V+ +    NIV+ N +++ L  N +
Sbjct: 316 MIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW-NVMSKNNCCNIVSYNMLIQGLLDNKK 374

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A   + +L   G K +  T+  LIN  CK   L KA ++           D   YS 
Sbjct: 375 VEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSS 434

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++ GL K G L++  EL+        KL+  VF+S+++ YV    +  A+     M +  
Sbjct: 435 MVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKD 494

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P V+SY+ +I GLC+  R  +A     ++L   L+P ++TYS LIDG C+  K+    
Sbjct: 495 CAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMAL 554

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+   I + LKPD  + +++I+GL     +  AL  F Q  ++  +P+L   NT+M+G 
Sbjct: 555 NLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGL 614

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            +     + +K++  +    ++PD+I++ +  +G+ S   +S AI   +  L RG+ P+ 
Sbjct: 615 YKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNA 674

Query: 524 ITYSAIIHGLFKGK 537
            T++ ++  +   K
Sbjct: 675 PTWNVLVRAVVDDK 688



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 200/434 (46%), Gaps = 41/434 (9%)

Query: 39  LANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTY 98
           + N +K N  +P +  F            + +IH L ++   + A  VF +M+       
Sbjct: 277 MWNRMKKNEKSPDLFTF------------SSMIHGLSKAGNFNAAEKVFQEMI------- 317

Query: 99  NFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGI--YLSPDLVQRLMSC 156
                    L      Y+ ++    R GK+++  E++  MS       +S ++   L+  
Sbjct: 318 ------ESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNM---LIQG 368

Query: 157 LVDSNSVGQ---YYKLC--RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
           L+D+  V Q   Y++L   R ++      Y  L+NGL + G +  A  +  +    G   
Sbjct: 369 LLDNKKVEQAICYWQLLHERGLKADS-TTYGLLINGLCKNGYLNKALRILEEAENEGADL 427

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           +    + ++  LC  G +  A  L   +     K N   F++LIN + +  KLE+A  + 
Sbjct: 428 DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVL 487

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M   D  P ++ Y+ +I+GL KA R  +    L   L+ GLK D++ +S ++D     
Sbjct: 488 REMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRG 547

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
             V  A+  + + +N    P++  ++I+I GLC   ++  A  +F Q+      P L+T+
Sbjct: 548 EKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTH 607

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
           +++++G  K+G   +   ++D +++ GL+PD +  ++   GL     + DA+ F + ++ 
Sbjct: 608 NTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALD 667

Query: 447 MTLIPNLFIFNTLM 460
             ++PN   +N L+
Sbjct: 668 RGILPNAPTWNVLV 681


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 235/502 (46%), Gaps = 41/502 (8%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           +LF++      C Y+ L++     G+I ++ ++F  M+       PD+V           
Sbjct: 243 QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS-----PPDVV----------- 286

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
                              Y  +++G      +E A  +  ++  RG   N V    ++ 
Sbjct: 287 ------------------TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  GQ+ +A  + + +++ G   +   F+T+++ FC++  L  A   ++ M +  L  
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D + Y+ LI+GL +AG LKE   +L    D+GL +D V ++ ++D Y  +G +  A   +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           ++M+     PNV++Y+ L  GLC+QG +  A  L  ++  + LE ++ TY+SLI+G CK+
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKA 508

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L        +M + GLKPD    + +I  L     +  A     + +   + P +  +
Sbjct: 509 GNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTY 568

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N LM+G C   R     +L   M   NI P+  T+  L++    + ++ S   ++  ML 
Sbjct: 569 NVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLS 628

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           + + P+  TY+ +I G  K +N+   L+    M   G     + YN L+ +L K+     
Sbjct: 629 QEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 577 ALKLFGQLTDRGL--EPDIITY 596
           A +LF ++    L  EPD+  +
Sbjct: 689 ARRLFEKMRKERLTAEPDVYNF 710



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 226/439 (51%), Gaps = 12/439 (2%)

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           N +L +  ++ A  + +++ ++    N  + N +LK LC  G+I +A  LFD +      
Sbjct: 230 NAVLCRLPLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASP 282

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+VVT+  +++ +C  ++LE A +L + M    L  + + Y+ +I  L   G++ +   +
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           +   +  G+ LD  VF++VM  +   GD+  A   +D M   G   + ++Y+ LI GLC+
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G L EA  +  ++  + L+   +TY+ LIDG+CK GK+ + F +++ M+++ + P+ V 
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 426 CSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            + L +GL   GD   A     +     L  N+F +N+L++G C+       ++  + M 
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              +KPDV T+T +I  +     L  A  L  +ML +G+ P ++TY+ +++G      + 
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            G  + + M    + P+   YN L+     E N+ +  +++  +  + + P+  TYN +I
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 601 CGYCSLNSCLIDGYFKSQI 619
            G+C   +     YF S++
Sbjct: 643 KGHCKARNMKEALYFHSEM 661



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 236/476 (49%), Gaps = 34/476 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++  Y  + +++ ++++ + M+  G+ L+P     +++ L D   V    ++   M 
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      V+  +M+G  RKG +  A +   ++ +RG   + VT   ++  LC  G++ 
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +   +   G   + VT++ LI+ +CK  K+ +AF ++N M++  + P+++ Y+ L 
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K G +   NELL     +GL+L++  ++S+++     G++ +A++T   M   G  
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +Y+ +I  LCQ   L  A  L  ++L + ++P+++TY+ L++GFC SG++  G  L
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            + M+++ + P                              N   +N+LM   C  K   
Sbjct: 588 LEWMLEKNIHP------------------------------NTTTYNSLMKQYCIEKNMK 617

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
            T +++  M    + P+  T+ +LI+G     ++  A+    +M+++G      +Y+A+I
Sbjct: 618 STTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
             L K K  +    +F+ M +  +  +  +YN  +++   E NL++ L L  +L +
Sbjct: 678 RLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 159/333 (47%), Gaps = 14/333 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  + +  L   G  Y+ LI    R G++ E+  +   M D G+    D+     + L+D
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL----DVDAVTYTVLID 433

Query: 160 SN-SVGQ-------YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
               VG+       + K+ +         Y  L +GL ++G +  A  +  ++  +G   
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           NI T N ++  LC  G +  A      +   G KP+V T++T+I A C+  +L++A  L 
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M++  + P ++ Y++L++G   +GR++ G  LL   L++ +  +   ++S+M  Y   
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
            ++    + Y  ML+   +PN  +Y+ILIKG C+   + EA     +++ +    +  +Y
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGL--KPD 422
           ++LI    K  K  +   L++ M K  L  +PD
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAEPD 706


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 233/453 (51%), Gaps = 11/453 (2%)

Query: 165 QYYKLCRAMRGKGF--CVYEFLM--NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           + Y+LCR MR  G      EF M   GLL   + ++A  + +++   G +P+  T N ++
Sbjct: 335 KAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILI 393

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC   +I  A +L++ +   G KP +VT+ +L+  +C    +++A +LY  M      
Sbjct: 394 HWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFT 453

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+++ Y+ L+ G        +   LL      G+  +   ++++++    +G V    + 
Sbjct: 454 PNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEM 513

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
             R    GF+P  ++Y+ +I G  + G +  A  ++ Q+  + + P+++TY+S IDG+CK
Sbjct: 514 LKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
           +        + +++  +GL+PD    + LI G      M  AL+     ++  L+PN+ +
Sbjct: 574 TSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISV 633

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N+ + G   LK   + ++ +  M    I  D  T+T LI G +  G+++ A+ L+ +M+
Sbjct: 634 YNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMV 693

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            +G  PD IT++A+ HGL +  +I     +   M R  + P++ +YN+L+N  ++   L 
Sbjct: 694 AKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQ 753

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            A +L  ++ +R + PD  TY+ I+ G  SL S
Sbjct: 754 EAFRLHDEMLERKIMPDDTTYD-ILVGMKSLGS 785



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 133/526 (25%), Positives = 238/526 (45%), Gaps = 51/526 (9%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLCRAMRGKGFCVY 181
           G  D++V +F  M    I   PD  QR+ S  + S        +   + R M+  GF  +
Sbjct: 191 GMYDDAVRLFDEMPASEI--EPD--QRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPW 246

Query: 182 EFLMNG----LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           +F  N     L++ G +E A H+  +++  G   ++V    ++   C+  ++  A  +F+
Sbjct: 247 DFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFE 306

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL------------------ 279
             L  G  P  VT++ LI    +E   EKA++L   M +  L                  
Sbjct: 307 ETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDK 366

Query: 280 ----------------VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
                           +PD   Y+ILI  L +  +++E   L     + G+K  +V + S
Sbjct: 367 LWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHS 426

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++  Y   G +  AV+ Y  M   GF PNV++Y+ L+KG   +    +A  L  ++    
Sbjct: 427 LLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG 486

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDAL 438
           +  +  TY++LI+G C  G++ +   +       G  P A+  + +ING     +MG A 
Sbjct: 487 VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAF 546

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             + Q     + PN+  + + +DG C+       +K+   +    ++PD+  +  LI G 
Sbjct: 547 AVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGF 606

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
             +G++S A+ +   MLK GL P++  Y++ I G    K +   L  ++ M + G+  D 
Sbjct: 607 CQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDT 666

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A Y  L++   K+ N+  ALKL+ ++  +G  PD IT+  +  G C
Sbjct: 667 ATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLC 712



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 195/398 (48%), Gaps = 9/398 (2%)

Query: 219 ILKRLCI-NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           ++ R C   G   +A  LFD +     +P+    S  I + CK     +A  +   M + 
Sbjct: 182 VVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDA 241

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
             VP    ++ ++D L K GR++E   +    L  G K+ VV+ +++M  Y    +V +A
Sbjct: 242 GFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKA 301

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +  ++  L  G +P  ++Y++LI+G  ++G   +A  L  Q+    L PS   ++ +I G
Sbjct: 302 LDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKG 361

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
                  +D  SL+  M   G+ PDA   ++LI+ L     + +AL  + +     + P 
Sbjct: 362 LLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPY 420

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  +++L+   C      + VKL+  M      P+V+T+T L++G  ++ +   A  L  
Sbjct: 421 IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLA 480

Query: 513 QMLKRGLTPDVITYSAIIHGL-FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
           +M + G++ +  TY+ +I+GL   G+   VG  M K  E  G  P    YN ++N  IK 
Sbjct: 481 EMKQNGVSCNDYTYNTLINGLCVVGRVCEVG-EMLKRFETEGFVPTAMTYNSIINGFIKA 539

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             + +A  ++ Q+  +G+ P+I+TY + I GYC  + C
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCC 577



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 168/320 (52%), Gaps = 4/320 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ ++     D++  + A M   G+  +      L++ L     V +  ++ +   
Sbjct: 459 YTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFE 518

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y  ++NG ++ G++ +AF +++Q+  +G  PNIVT    +   C      
Sbjct: 519 TEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCD 578

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + + +   G +P++  +++LI  FC+E  +  A Q+  LM++  L+P++ +Y+  I
Sbjct: 579 LALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G      ++E        +  G+ LD   +++++D +   G+V  A++ Y  M+  G +
Sbjct: 639 TGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNI 698

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+ I+++ L  GLC+ G + +A  L  ++    + P++L Y+ LI+G+ ++GKL++ F L
Sbjct: 699 PDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRL 758

Query: 411 YDNMIKRGLKPDAVVCSLLI 430
           +D M++R + PD     +L+
Sbjct: 759 HDEMLERKIMPDDTTYDILV 778



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 180/357 (50%), Gaps = 13/357 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y  L+  Y   G +DE+V+++  M   G   +P++V    LM   ++  +  + Y L   
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKG--FTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G       Y  L+NGL   G +     M ++    GFVP  +T N I+      G 
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +G+A +++  +   G  PN+VT+++ I+ +CK +  + A ++ N +    L PD+  Y+ 
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G  + G +    ++L+  L  GL  ++ V++S +  Y  +  +  A++ Y++M+  G
Sbjct: 602 LIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEG 661

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              +  +Y+ LI G  + G +  A  L+ +++ +   P  +T+++L  G C++G + D  
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDAR 721

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
            L D M +  ++P+ ++ ++LING      + +A R   + +   ++P+   ++ L+
Sbjct: 722 KLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 6/297 (2%)

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           +G  LD  +F  VM A    G    AV+ +D M      P+    S+ I  LC+      
Sbjct: 171 KGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANR 230

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  +  ++      P   T++S++D   K G++ +   + D ++  G K   V+ + L++
Sbjct: 231 ALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMH 290

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           G      +  AL  F +++R  L+P    +  L+ GC          +L   M  + + P
Sbjct: 291 GYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLP 350

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
                 ++I+G+ +      A+ LF +M   G+ PD  TY+ +IH L + + I   L+++
Sbjct: 351 STNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLW 409

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           + M   GV P I  Y+ LL        +D A+KL+ ++  +G  P+++TY T++ G+
Sbjct: 410 EKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 236/517 (45%), Gaps = 56/517 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+  +++  ++     I   M   G   SP L   L+    ++      YKL   M 
Sbjct: 309 YRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMN 368

Query: 175 G----KGFCVYEFLMNGLLRKGVIEN------AFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                 G+ VY   +  +  +  + N      A  ++ +++    V N +      + LC
Sbjct: 369 TCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLC 428

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   A  +   ++  G  P+  T++ +I   C+  +++KAF L+  M ++ + PD+ 
Sbjct: 429 GVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVY 488

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ILID   KAG +++           G   +VV +++++ AY+    + +A   + RM
Sbjct: 489 TYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRM 548

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL----------------IRRLEPSL 388
           +     PN I+YS LI GLC+ G + +AC ++ +++                   + P++
Sbjct: 549 VGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNV 608

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT 448
           +TY +L++G CK+ K+ D   L D M+  G +P                           
Sbjct: 609 VTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEP--------------------------- 641

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
              N  +++ L+DG C++       ++F+ M      P V T+T LI  +   G L  A+
Sbjct: 642 ---NQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +  QMLK    P+V+TY+A++ GL K       L++  LME+ G +P++  Y  L++ L
Sbjct: 699 KVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGL 758

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            K   +DA L+LF Q+  +G  P+ +TY  +I   C+
Sbjct: 759 GKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCA 795



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/508 (22%), Positives = 219/508 (43%), Gaps = 92/508 (18%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G  E AF + ++++++GFVP+  T  K++  LC   ++  A  LF  +  VG  P+V T+
Sbjct: 431 GKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTY 490

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + LI++FCK   +E+A   ++ M      P+++ Y+ L+    K+ +L + N++    + 
Sbjct: 491 TILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVG 550

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG----------------FLPNVIS 355
                + + +S+++D     G++ +A + Y +++                     PNV++
Sbjct: 551 DACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVT 610

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  L+ GLC+  ++ +A  L   +L    EP+ + Y +L+DGFCK G++     ++  M 
Sbjct: 611 YGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMT 670

Query: 416 KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           K G  P     + LI+ +  D     A++   Q ++ +  PN+  +  ++DG C+     
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETE 730

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + L  LM      P+V+T+T LI G+   G + + + LF QM  +G  P+ +TY  +I
Sbjct: 731 KALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790

Query: 531 -HGLFKG--------------------------------KNISVGLHMFKLMERNGVAPD 557
            H    G                                K     L + + ME +  AP 
Sbjct: 791 NHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPI 850

Query: 558 IAIYNVLLNMLIKECNLDAALKL------------------------------------- 580
             +Y +L++   K   L+ AL+L                                     
Sbjct: 851 APVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVA 910

Query: 581 -FGQLTDRGLEPDIITYNTIICGYCSLN 607
            + ++  RG+ PD+  +  ++ G    N
Sbjct: 911 LYSEMRRRGIVPDLSAFVCLVKGLIERN 938



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 142/640 (22%), Positives = 266/640 (41%), Gaps = 78/640 (12%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKM 90
           +F   + ++A L    +P   ++FF W    V   +       L +    +  +   +++
Sbjct: 97  EFLTDSVVVAVLGAVRSPELCVRFFLWAERQVGYKHTGACYDALAEVLGFEDPARTAERL 156

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           + + G+        RD LG      + L+      G   E++E    + D G   S    
Sbjct: 157 LREIGEDD------RDVLGRL---LNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTY 207

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFC-----VYEF---------------------- 183
             L+  L  +  V   +++ + M   GFC     V  F                      
Sbjct: 208 NALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLEREDF 267

Query: 184 ---------LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                    +++GL+   +   A     ++    ++PN+VT   +L       Q+G    
Sbjct: 268 KLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKR 327

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           + ++++  G  P+   F++L++ +C       A++L+N M      P  ++Y+I I  + 
Sbjct: 328 IINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSI- 386

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMD---------AYVGIGDVGRAVQTYDRML 345
             GR +  N  LL   ++  + +++V S V++            G+G   +A Q    M+
Sbjct: 387 -CGREELPNPELLDLAEKVYE-EMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMM 444

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             GF+P+  +Y+ +I  LCQ  R+ +A  LF ++    + P + TY+ LID FCK+G + 
Sbjct: 445 RKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIE 504

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLM 460
              S +D M   G  P+ V  + L++  +       A   F + V     PN   ++ L+
Sbjct: 505 QAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALI 564

Query: 461 DGCCRLKRATDTVKLFM-LMGMYN---------------IKPDVITHTVLIRGIASQGSL 504
           DG C+        +++  L+G  +               I P+V+T+  L+ G+     +
Sbjct: 565 DGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKV 624

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           S A  L   ML  G  P+ I Y A++ G  K   I     +F  M + G  P +  Y  L
Sbjct: 625 SDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSL 684

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           ++ + K+  LD A+K+  Q+      P+++TY  ++ G C
Sbjct: 685 IDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLC 724



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 120/521 (23%), Positives = 229/521 (43%), Gaps = 35/521 (6%)

Query: 91  VIQFGKTYNFFR-LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           V +F K +   + + R         Y+ +I    +  ++D++  +F  M  +G+  +PD+
Sbjct: 430 VGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGV--NPDV 487

Query: 150 VQR--LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQ 203
                L+     +  + Q       MR  G       Y  L++  L+   +  A  +  +
Sbjct: 488 YTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHR 547

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP----------------KPN 247
           ++     PN +T + ++  LC  G+I  A  ++  L+                     PN
Sbjct: 548 MVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPN 607

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           VVT+  L+N  CK  K+  A  L + M+     P+ I+Y  L+DG  K G +    E+ L
Sbjct: 608 VVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFL 667

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
                G    V  ++S++D     G +  A++   +ML     PNV++Y+ ++ GLC+ G
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTG 727

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
              +A  L   +  +   P+++TY++LIDG  K+GK+  G  L+  M  +G  P+ V   
Sbjct: 728 ETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYR 787

Query: 428 LLINGLMGDA----LRFFFQSVRMTLIPN-LFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +LIN                 ++ T  P  L  + T + G    KR   ++ L   M  +
Sbjct: 788 ILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFS--KRFLASLGLLEEMESH 845

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT---YSAIIHGLFKGKNI 539
           +  P    + +LI   +  G L +A+ L  +M++   + ++ +   ++++I  L     +
Sbjct: 846 DTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQV 905

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
              + ++  M R G+ PD++ +  L+  LI+    + AL+L
Sbjct: 906 EEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/456 (22%), Positives = 189/456 (41%), Gaps = 30/456 (6%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+  L   G +E AF + +++   GF  +  T     + LC  G+ G+A    D+L
Sbjct: 206 TYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDA---LDLL 262

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                K + V  + +I+   + +   +A    + M     +P+++ Y  L+ G  K  +L
Sbjct: 263 EREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQL 322

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                ++   +  G      +F+S++  Y    D   A + ++RM   G  P  + Y+I 
Sbjct: 323 GWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIF 382

Query: 360 IKGLCQQGRLVE------ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           I  +C +  L        A  ++ ++L+     + +  ++     C  GK    F +   
Sbjct: 383 IGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKE 442

Query: 414 MIKRGLKPDAV----VCSLLINGLMGDALRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKR 468
           M+++G  PDA     V + L      D     FQ ++   + P+++ +  L+D  C+   
Sbjct: 443 MMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGL 502

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                  F  M      P+V+T+T L+        L  A  +F +M+     P+ ITYSA
Sbjct: 503 IEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSA 562

Query: 529 IIHGLFKGKNISVGLHM----------------FKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +I GL K   I     +                F+  + + ++P++  Y  L+N L K  
Sbjct: 563 LIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQ 622

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            +  A  L   +   G EP+ I Y+ ++ G+C +  
Sbjct: 623 KVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGE 658


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 222/419 (52%), Gaps = 26/419 (6%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM  LL++    +  ++++++I+R   PN+ T N ++  LC  G++  A  + + + + G
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 244 PKPNVVTFSTLINAFCK---EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             PNVV+++TLI+ +CK     K+ KA  +   M+E ++ P+L  ++ILIDG +K   L 
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              ++    LD+ +  +V+ ++S+++     G +  A+   D+M++ G  PN+I+Y  LI
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ G + EA  +F  V  +   P+   Y+ LID +CK GK+ DGF+L + M + G+ 
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 421 PDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           PD    + LI GL      +A +  F  +    +P+L  F+ LM+G C    +     L 
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLL 493

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK-RGLTPDVITYSAIIHGLF- 534
             M    +KP  +T+ ++++G   +G+L +A  +  QM K R L  +V +Y+ ++ G   
Sbjct: 494 KEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           KGK     + + +++E+ G+ P+   Y +     +KE           ++ D+G  PDI
Sbjct: 554 KGKLEDANMLLNEMLEK-GLVPNRITYEI-----VKE-----------EMVDKGFVPDI 595



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 220/414 (53%), Gaps = 10/414 (2%)

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           E  F   ++    G+  + ++C  ++  L    +  +   L+  ++    +PNV TF+ +
Sbjct: 170 ELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVV 229

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK---AGRLKEGNELLLTALD 311
           INA CK  K+ KA  +   M      P+++ Y+ LIDG  K    G++ + + +L   ++
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
             +  ++  F+ ++D +    ++  +++ +  ML+   +PNVI+Y+ LI GLC  G++ E
Sbjct: 290 NEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINE 349

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A G+  +++   ++P+L+TY SLI+GFCK+G +++   ++D++  +G +P   + ++LI+
Sbjct: 350 AIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLID 409

Query: 432 -----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                G + D      +  R  ++P++  +N L+ G CR        KLF  +    + P
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-P 468

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           D++T  +L+ G  S+G    A +L  +M K GL P  +TY+ ++ G  K  N+    +M 
Sbjct: 469 DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMR 528

Query: 547 KLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
             ME+   +  ++A YNVLL    ++  L+ A  L  ++ ++GL P+ ITY  +
Sbjct: 529 TQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 206/423 (48%), Gaps = 19/423 (4%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL-FDVLLLVGPKPNVVTFSTL 254
           N   + RQ+I     P++  C +    L  N  I  +  L F +L  +          + 
Sbjct: 66  NPNELFRQLISSELNPDL--CLRYYTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSF 123

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-- 312
           ++ F +        Q++++   + +  ++ + SI+ D L  A       EL   A  R  
Sbjct: 124 LDGFVRNGS---DHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSG 180

Query: 313 --GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
             G KL  +    +M A +           Y  M+     PNV +++++I  LC+ G++ 
Sbjct: 181 YYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCK---SGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           +A  +   + +    P++++Y++LIDG+CK   +GK+    ++   M++  + P+    +
Sbjct: 241 KARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFN 300

Query: 428 LLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +LI+G   D     +L+ F + +   +IPN+  +N+L++G C   +  + + +   M   
Sbjct: 301 ILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSA 360

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            ++P++IT+  LI G    G +  A+ +F  +  +G  P    Y+ +I    K   I  G
Sbjct: 361 GVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDG 420

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             + + MER G+ PD+  YN L+  L +  N++AA KLF QLT++GL PD++T++ ++ G
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEG 479

Query: 603 YCS 605
           YCS
Sbjct: 480 YCS 482



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 184/365 (50%), Gaps = 24/365 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPDLVQRLMSCLVDS----NSVGQYYKL 169
           ++ +I    + GK++++ ++   M DM +Y  SP++V    + L+D        G+ YK 
Sbjct: 226 FNVVINALCKTGKMNKARDV---MEDMKVYGYSPNVVS--YNTLIDGYCKLGGNGKMYKA 280

Query: 170 CRAMR-------GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
              ++             +  L++G  +   +  +  + ++++ +  +PN++T N ++  
Sbjct: 281 DAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLING 340

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC  G+I  A  + D ++  G +PN++T+ +LIN FCK   +++A  +++ +      P 
Sbjct: 341 LCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPT 400

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
             +Y++LID   K G++ +G  L       G+  DV  ++ ++      G++  A + +D
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           ++ N G LP+++++ IL++G C +G   +A  L  ++    L+P  LTY+ ++ G+CK G
Sbjct: 461 QLTNKG-LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEG 519

Query: 403 KLRDGFSLYDNMIK-RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
            L+   ++   M K R L+ +    ++L+ G      + DA     + +   L+PN   +
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579

Query: 457 NTLMD 461
             + +
Sbjct: 580 EIVKE 584



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 34/270 (12%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G+  + +S   L+  L +Q R  +   L+ +++ R+++P++ T++ +I+  CK+GK+   
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             + ++M   G  P+ V                               +NTL+DG C+L 
Sbjct: 243 RDVMEDMKVYGYSPNVVS------------------------------YNTLIDGYCKLG 272

Query: 468 RATDTVK---LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
                 K   +   M    + P++ T  +LI G     +L  ++ +F +ML + + P+VI
Sbjct: 273 GNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVI 332

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+++I+GL  G  I+  + M   M   GV P++  Y+ L+N   K   +  AL +F  +
Sbjct: 333 TYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSV 392

Query: 585 TDRGLEPDIITYNTIICGYCSLNSCLIDGY 614
             +G  P    YN +I  YC L   + DG+
Sbjct: 393 KGQGTRPTTRMYNMLIDAYCKLGK-IDDGF 421


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 238/494 (48%), Gaps = 10/494 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L++ Y   G +  ++ +   +S+ G+  +      L+     + ++ + ++    M+ KG
Sbjct: 151 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 210

Query: 178 F--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
               VY    ++ G L+    +NAF M    ++ G   N+ T N +L  LC  G++  A 
Sbjct: 211 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEAC 269

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           +L+D ++  G  PNVV+++ +I   C++  +  A ++Y  M++    P+ + ++IL+DG 
Sbjct: 270 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 329

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
           FK G ++    +     D  +         ++      G        +++ ++ GF+P  
Sbjct: 330 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 389

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           + Y+ +I G  ++G +  A  ++ ++    + PS +TY+SLIDGFCK   +     L ++
Sbjct: 390 MPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND 449

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M ++GLK D      LI+G      M  A     +     L PN FI+N+++ G   +  
Sbjct: 450 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 509

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             + + L+  M    I  D+ T+T LI G+   G L  A  +  +ML +G+ PD   ++ 
Sbjct: 510 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTV 569

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+GL           + + M    + P + IYN L+    KE NL  A +L  ++ DRG
Sbjct: 570 LINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRG 629

Query: 589 LEPDIITYNTIICG 602
           L PD ITY+ ++ G
Sbjct: 630 LVPDNITYDILVNG 643



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 213/417 (51%), Gaps = 6/417 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  + R++   G++P   T   ++      G +  A  L D ++  G   N+   ++L+ 
Sbjct: 94  ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 153

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
            +C +  L  A  L N + E  LVP+ + YS+LIDG  K G +++  E       +G++ 
Sbjct: 154 GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRS 213

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            V   +S+++ Y+       A   ++  L  G L NV +++ L+  LC++G++ EAC L+
Sbjct: 214 SVYSLNSILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLW 272

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-- 434
            +V+ + + P++++Y+++I G C+   +     +Y  M+  G  P+AV  ++L++G    
Sbjct: 273 DEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKK 332

Query: 435 GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           GD   A   F +     ++P       ++ G C+  R+ +   LF         P  + +
Sbjct: 333 GDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPY 392

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             +I G   +G+++ A  ++ +M + G+TP  +TY+++I G  KG NI + L +   M+R
Sbjct: 393 NTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKR 452

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            G+  DI  Y  L++   K  ++ +A +L  +L   GL P+   YN++I G+ ++N+
Sbjct: 453 KGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 509



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 212/429 (49%), Gaps = 6/429 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++G  + G IE AF  + ++  +G   ++ + N IL+         NA ++F+  
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA 241

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   NV TF+TL++  CKE K+ +A  L++ ++   + P+++ Y+ +I G  +   +
Sbjct: 242 LESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               ++    LD G   + V F+ +MD Y   GD+  A   + RM +   LP   +  I+
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKGLC+ GR  E   LF + + +   P+ + Y+++IDGF K G +    ++Y  M + G+
Sbjct: 361 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 420

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P  V  + LI+G         AL+      R  L  ++  + TL+DG C+ +      +
Sbjct: 421 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 480

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   +    + P+   +  +I G  +  ++  AI L+ +M+  G+  D+ TY+++I GL 
Sbjct: 481 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 540

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +     +   M   G+ PD   + VL+N L  +   + A K+   +  + + P ++
Sbjct: 541 KSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVL 600

Query: 595 TYNTIICGY 603
            YNT+I G+
Sbjct: 601 IYNTLIAGH 609



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 242/547 (44%), Gaps = 63/547 (11%)

Query: 9   LTVWRSINKCYCSESKTHISDLQFNQANA-ILANLIKTNNPTP-AIQFFKWTHNCVSSPN 66
           L V  S+ K YC         +Q N  +A +L N I  +   P  + +      C  + N
Sbjct: 145 LAVATSLMKGYC---------MQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGN 195

Query: 67  IAQLIHVLLQSDMRDVASHVFDKMVIQFG-----KTYNFFRLFRDSLGDFGCD---YSFL 118
           I +      +   + + S V+    I  G        N F +F D+L     +   ++ L
Sbjct: 196 IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTL 255

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR----LMSCLVDS-NSVGQYYKLCRAM 173
           +    + GK++E+  ++  +   GI  SP++V      L  C  D+ N+  + YK    M
Sbjct: 256 LSWLCKEGKMNEACNLWDEVIAKGI--SPNVVSYNNIILGHCRKDNINAACKVYK---EM 310

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              GF      +  LM+G  +KG IENAF +  ++     +P   T   I+K LC  G+ 
Sbjct: 311 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 370

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
                LF+  +  G  P  + ++T+I+ F KE  +  A  +Y  M E+ + P  + Y+ L
Sbjct: 371 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 430

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDG  K   +    +LL     +GLK+D+  + +++D +    D+  A +  + +   G 
Sbjct: 431 IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGL 490

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            PN   Y+ +I G      + EA  L+ +++   +   L TY+SLIDG  KSG+L     
Sbjct: 491 SPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASD 550

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           ++  M+ +G+ PD    ++LINGL                              C   + 
Sbjct: 551 IHTEMLSKGILPDDRAHTVLINGL------------------------------CNKGQF 580

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            +  K+   M   N+ P V+ +  LI G   +G+L  A  L  +ML RGL PD ITY  +
Sbjct: 581 ENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDIL 640

Query: 530 IHGLFKG 536
           ++G FKG
Sbjct: 641 VNGKFKG 647



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/429 (22%), Positives = 200/429 (46%), Gaps = 4/429 (0%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+  ++RK +   A  +H +++  G   +  T + +L+     G I  A   F      G
Sbjct: 11  LLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARG 70

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + +   +S  ++  C +     A  L   M     +P    ++ +I    K G + E  
Sbjct: 71  VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 130

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L    ++ G  +++ V +S+M  Y   G++  A+   + +   G +PN ++YS+LI G 
Sbjct: 131 RLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGC 190

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-- 421
           C+ G + +A   + ++  + +  S+ + +S+++G+ K    ++ F+++++ ++ GL    
Sbjct: 191 CKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVF 250

Query: 422 --DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + ++  L   G M +A   + + +   + PN+  +N ++ G CR        K++  M
Sbjct: 251 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 310

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                 P+ +T T+L+ G   +G + +A  +F +M    + P   T   II GL K    
Sbjct: 311 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 370

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
             G  +F      G  P    YN +++  IKE N++ A  ++ ++ + G+ P  +TY ++
Sbjct: 371 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 430

Query: 600 ICGYCSLNS 608
           I G+C  N+
Sbjct: 431 IDGFCKGNN 439



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 66/156 (42%)

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + P++   N L+    R     +  +L   M +  +  D  T  V++R    +G++  A 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
             F Q   RG+  D   YS  +H L    N    L + + M   G  P    +  ++   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +KE N+  AL+L   + + G   ++    +++ GYC
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYC 156


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 227/459 (49%), Gaps = 39/459 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V + L++ L  +G++++A     +V +    PN  TCN IL RL  +        LF+ L
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQL 183

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
               P PNV TF+ +I+  CKE +L +A  L++ M EM  +PD++ ++ LIDG  K G L
Sbjct: 184 ----PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGEL 239

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +L+      G K DVV ++++++ +   G +  A   +  M   G + NV+++S  
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +   C++G + EA  LF Q+ +R +  +  TY+ LIDG CK+G+L D   L D M+++G+
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359

Query: 420 KPDAVVCSLLINGL--------MGDALRFFFQS-VRMTLIPNLFIFNTLMDGCCRLKRAT 470
             + V  ++L++GL          D LR   ++ VR     N  ++ TL+ G    K + 
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVR----ANELLYTTLIHGHFMNKNSE 415

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + L   M    ++ D+  +  LI+G+ +   L  A  L  +M + GL P+ I Y+ ++
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475

Query: 531 HGLFKGKNISVGLHM----------------------FKLMERNGVAPDIAIYNVLLNML 568
              FK   +   + M                      F  M   G++ D  +Y  LL+  
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 535

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +K+ NL  A  L  ++ D GL+ D+  Y   I G+C+LN
Sbjct: 536 LKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLN 574



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 206/459 (44%), Gaps = 49/459 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I+   + G++ E+  +F+ M +MG    PD+V                        
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCL--PDVV------------------------ 224

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 +  L++G  + G ++    +  ++ + G   ++VT N ++   C  G++  A  
Sbjct: 225 -----TFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYG 279

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            F  +   G   NVVTFST ++AFCKE  + +A +L+  M    +  +   Y+ LIDG  
Sbjct: 280 YFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTC 339

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           KAGRL +   LL   + +G+ L+VV ++ ++D       V  A      M   G   N +
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ LI G        +A GL  ++  + LE  +  Y +LI G C   KL +  SL   M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459

Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            + GL+P+ ++ + +++     G + +A+    + +     PN        +GC      
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN--------NGCL----- 506

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            + V+LF  M    +  D + +T L+ G   QG+L  A  L  +M+  GL  D+  Y+  
Sbjct: 507 NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCF 566

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           I G      +     +F  M  +G+APD A+YN L+  +
Sbjct: 567 ISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQI 605



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 45/229 (19%), Positives = 89/229 (38%), Gaps = 52/229 (22%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  +      ++++ + + M + G+ L   L   L+  L + + + +   L   M 
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G    + +Y  +M+   + G +  A  M ++++  GF PN             NG + 
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN-------------NGCLN 507

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM----MEMDL------- 279
            A  LF+ ++  G   + V ++ L++ + K+  L  AF L   M    +++DL       
Sbjct: 508 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI 567

Query: 280 ------------------------VPDLIIYSILIDGLFKAGRLKEGNE 304
                                    PD  +Y+ LI  + +   L  GN+
Sbjct: 568 SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQIPEIRELGGGNK 616


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 220/411 (53%), Gaps = 8/411 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
            F   ++    G   ++ +CN ++  L   G+IG+   ++  ++    +P +++F+ +IN
Sbjct: 112 GFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVIN 171

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG---LFKAGRLKEGNELLLTALDRG 313
             CK  KL KA  +   M    +  ++I Y+ LIDG   + K G++ + + +L      G
Sbjct: 172 GLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADG 231

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  + V F+ ++D +    +V  A++ +  M   G  PNV++Y+ LI GLC  G++ EA 
Sbjct: 232 ICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEAT 291

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            L  Q++   L+P+++T+++L++GFCK+  ++    L+D+M K+G+ P+    ++LI+  
Sbjct: 292 ALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAY 351

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                M DA   +   +   + P++  +N L+ G CR         L   M   ++K D+
Sbjct: 352 CKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADL 411

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           IT+ +LI  + ++G +  A+ L  +M ++GL P  +TY+ +I G  K  N+   L++   
Sbjct: 412 ITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQ 471

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           ME+ G   ++A YNVL+    K+  L+ A  L  ++ ++GL P+ +TY  +
Sbjct: 472 MEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIV 522



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 196/370 (52%), Gaps = 8/370 (2%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G K +V + + L++   K  ++     +Y  M+   + P LI ++I+I+GL K G+L + 
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR---AVQTYDRMLNGGFLPNVISYSIL 359
            +++     RG+  +V+ +++++D Y  +G +G+   A      M   G  PN ++++IL
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+   +  A  +F ++  + ++P+++TY+SLI+G C +GK+ +  +L D M+   L
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302

Query: 420 KPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KP+ +  + L+NG     ++  A   F    +  + PN+  +N L+D  C+ +   D   
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L+ +M    + PDV T+  LI G+  +G L +A  L  +M  + L  D+ITY+ +I  L 
Sbjct: 363 LYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLC 422

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +   L +   M R G+ P    YN +++   KE NL AAL L  Q+   G   ++ 
Sbjct: 423 NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVA 482

Query: 595 TYNTIICGYC 604
           TYN +I G+C
Sbjct: 483 TYNVLIKGFC 492



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 206/396 (52%), Gaps = 8/396 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM+GL++ G I +   +++++I+R   P +++ N ++  LC  G++  A  + + + + G
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---DLVPDLIIYSILIDGLFKAGRLK 300
              NV+T++TLI+ +CK  K+ K ++   ++ EM    + P+ + ++ILIDG  K   + 
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              ++      +G+K +VV ++S+++     G V  A    D+M+N    PN+I+++ L+
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+   + +A  LF  +  + + P++ TY+ LID +CK   + D F+LY  M+ +G+ 
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373

Query: 421 PDAVVCSLLINGL--MGD--ALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD    + LI GL   GD  A R     +    L  +L  +N L+D  C        ++L
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M    +KP  +T+  +I G   +G+L +A+ L  QM K G   +V TY+ +I G  K
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
              +     +   M   G+ P+   Y ++   ++++
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEK 529



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 219/457 (47%), Gaps = 17/457 (3%)

Query: 109 GDFGCDYSFLIE----NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVG 164
           GD  C  S +++     Y +  +     E F   SD G+ LS      LMS LV    +G
Sbjct: 86  GDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIG 145

Query: 165 Q----YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
                Y ++ R         +  ++NGL + G +  A  +   +  RG   N++T N ++
Sbjct: 146 DMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLI 205

Query: 221 KRLCINGQIG---NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
              C  G+IG    A ++   +   G  PN VTF+ LI+ FCK+  +  A +++  M   
Sbjct: 206 DGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQ 265

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + P+++ Y+ LI+GL   G++ E   L    ++  LK +++  +++++ +     V +A
Sbjct: 266 GVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQA 325

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            + +D M   G  PNV +Y+ILI   C+   + +A  L+  +L + + P + TY+ LI G
Sbjct: 326 GELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAG 385

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPN 452
            C+ G L    +L   M  + LK D +  ++LI+     G M  ALR   +  R  L P+
Sbjct: 386 LCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPS 445

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              +NT++DG C+       + L   M       +V T+ VLI+G   +  L  A  L  
Sbjct: 446 QLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLN 505

Query: 513 QMLKRGLTPDVITYSAIIHGLF-KGKNISVGLHMFKL 548
           +ML++GL P+ +TY  +   +  KG    +  H++K+
Sbjct: 506 EMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKV 542



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 179/330 (54%), Gaps = 8/330 (2%)

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           II  IL+    K  R + G E    A D GLKL V   + +M   V +G++G     Y  
Sbjct: 94  IIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKE 153

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+     P +IS++I+I GLC+ G+L +A  +   + +R +  +++TY++LIDG+CK GK
Sbjct: 154 MIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGK 213

Query: 404 LRDGF---SLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFI 455
           +   +   ++   M   G+ P+ V  ++LI+G   D     A++ F +  R  + PN+  
Sbjct: 214 IGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVT 273

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N+L++G C   +  +   L   M    +KP++ITH  L+ G      +  A  LF  M 
Sbjct: 274 YNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMP 333

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           K+G+TP+V TY+ +I    K +N+     ++++M   GV PD++ YN L+  L ++ +L+
Sbjct: 334 KQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLE 393

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           AA  L  ++  + L+ D+ITYN +I   C+
Sbjct: 394 AARNLVSEMDTKHLKADLITYNILIDSLCN 423



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 4/101 (3%)

Query: 510 LFFQMLKR----GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           L F+  KR    GL   V + + ++ GL K   I     ++K M R  + P +  +N+++
Sbjct: 111 LGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVI 170

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           N L K   L+ A  +   +  RG+  ++ITYNT+I GYC +
Sbjct: 171 NGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 141/533 (26%), Positives = 253/533 (47%), Gaps = 45/533 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    + G + E+  +   M  MG+  +  +   L+  L  + S  + +     M 
Sbjct: 194 YSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMI 253

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      V   L++GL + G  + A  M   + +   +PN +T   ++   C  G + 
Sbjct: 254 VCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMD 313

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A SL   +      PNVVT+S++IN + K+  L+ A ++   M++ +++P+  IY+ LI
Sbjct: 314 GAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLI 373

Query: 291 DGLFKAGRLKEG----NELLLTALD-------------------------------RGLK 315
           DG  KAG+        NE+ L  L+                               +GL 
Sbjct: 374 DGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLL 433

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           LD V ++S+MD +   G    A    ++M   G   +V++Y++LI GL + G+  +A  +
Sbjct: 434 LDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DAESV 492

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
           +  +    L P   TY+++I+ +CK GKL +   L++ M    + P+++ C++L+ GL  
Sbjct: 493 YSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSK 552

Query: 434 MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            G+   A+    + +   + PN+ I   L++ C + +RA   +++   +    +K +   
Sbjct: 553 AGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREV 612

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  LI  +   G    A L+   M K G++ D +TY+A+IHG FK  +I   L  +  M 
Sbjct: 613 YNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQML 672

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             GV+P I  YN+LL  L+    +  A ++  ++ D GL+PD   YNT+I G+
Sbjct: 673 NEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGH 725



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 242/499 (48%), Gaps = 12/499 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  Y +   + E++ ++  M   G    PD+V    +++ L     + +   L R 
Sbjct: 159 YTTLISAYCKQHGLSEALSLYEEMISDGFL--PDVVTYSSIINGLCKRGMLTEAKALLRE 216

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G      VY  L++ L + G    +F    Q+I  G   ++V C  ++  L   G+
Sbjct: 217 MDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGK 276

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A ++F  L  +   PN +T++ +I+ +CK   ++ A  L   M +  +VP+++ YS 
Sbjct: 277 SDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSS 336

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+G  K G L     ++   LD+ +  +  ++++++D ++  G    AV  Y+ M   G
Sbjct: 337 IINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNG 396

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N       I  L +  ++ EA GL   ++ + L    + Y+SL+DGF K+G+    F
Sbjct: 397 LEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAF 456

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           ++ + M + G+K D V  ++LINGL+     DA   +     + L P+   +NT+++  C
Sbjct: 457 TMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESVYSGIRELGLAPDRATYNTMINAYC 516

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  +  + +KL+  M  +++ P+ IT  +L+ G++  G    AI +  +ML  G+ P+V 
Sbjct: 517 KQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVT 576

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            + A+++   K +     L M K +   G+  +  +YN L+ +L        A  +   +
Sbjct: 577 IHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNM 636

Query: 585 TDRGLEPDIITYNTIICGY 603
           T  G+  D +TYN +I G+
Sbjct: 637 TKEGISADTVTYNALIHGH 655



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 216/438 (49%), Gaps = 14/438 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y   + G  ++G+    F     ++++    +  TCN ++K  C  G +     + D L
Sbjct: 80  TYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNL 139

Query: 240 L--------LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           +            +PN+VT++TLI+A+CK+  L +A  LY  M+    +PD++ YS +I+
Sbjct: 140 IDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIIN 199

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL K G L E   LL      G+  + VV++ ++D+    G    +     +M+  G   
Sbjct: 200 GLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSF 259

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +++  + LI GL + G+  EA  +F  +      P+ +TY+++IDG+CK G +    SL 
Sbjct: 260 DLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLL 319

Query: 412 DNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
            +M K+ + P+ V  S +IN     G++  A+R   + +   ++PN +I+ TL+DG  + 
Sbjct: 320 RDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKA 379

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +    V L+  M +  ++ +       I  +     +  A  L   M+ +GL  D + Y
Sbjct: 380 GKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNY 439

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           ++++ G FK    S    M + M   G+  D+  YNVL+N L++    DA   ++  + +
Sbjct: 440 TSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAE-SVYSGIRE 498

Query: 587 RGLEPDIITYNTIICGYC 604
            GL PD  TYNT+I  YC
Sbjct: 499 LGLAPDRATYNTMINAYC 516



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 221/451 (49%), Gaps = 32/451 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y+F   GL     +   + ++ +++  G +PN+ T N ++   C   ++G+ S   D++
Sbjct: 18  IYQFNATGL-----VSQVWDLYSEMLSCGVLPNVFTHNILVHAWC---KMGHLSLALDLI 69

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             V    + VT++T I  FC++    + F   ++M++ D   D    +IL+ G  + G +
Sbjct: 70  RNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSV 129

Query: 300 KEGNELLLTALD--------RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           K G  ++   +D          L+ ++V +++++ AY     +  A+  Y+ M++ GFLP
Sbjct: 130 KYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLP 189

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +V++YS +I GLC++G L EA  L  ++    + P+ + Y+ L+D   K+G   + F   
Sbjct: 190 DVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQ 249

Query: 412 DNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             MI  G+  D VVC+ LI+GL       +A   F    ++  IPN   +  ++DG C+L
Sbjct: 250 SQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKL 309

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                   L   M    + P+V+T++ +I G   +G L  A+ +  +ML + + P+   Y
Sbjct: 310 GDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIY 369

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I G  K       + ++  M+ NG+  +  I +  +N L +   ++ A  L   +  
Sbjct: 370 ATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMS 429

Query: 587 RGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
           +GL  D + Y +           L+DG+FK+
Sbjct: 430 KGLLLDRVNYTS-----------LMDGFFKT 449



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 213/466 (45%), Gaps = 39/466 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++   ++  +  A  ++ ++I  GF+P++VT + I+  LC  G +  A +L   +
Sbjct: 158 TYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREM 217

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             +G  PN V ++ L+++  K     ++F   + M+   +  DL++ + LIDGLFKAG+ 
Sbjct: 218 DKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKS 277

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   +  T        + + +++++D Y  +GD+  A      M     +PNV++YS +
Sbjct: 278 DEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSI 337

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G  ++G L  A  +  ++L + + P+   Y++LIDG  K+GK      LY+ M   GL
Sbjct: 338 INGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGL 397

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + ++ +    IN L     M +A       +   L+ +   + +LMDG  +  R +    
Sbjct: 398 EENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFT 457

Query: 475 LFMLMGMYNIKPDVITHTVLIRGI----------------------------------AS 500
           +   M    IK DV+ + VLI G+                                    
Sbjct: 458 MAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESVYSGIRELGLAPDRATYNTMINAYCK 517

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           QG L +AI L+ +M    + P+ IT + ++ GL K       + +   M   G+ P++ I
Sbjct: 518 QGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTI 577

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +  LLN   K    D  L++  +L   GL+ +   YN++I   C L
Sbjct: 578 HRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGL 623



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 192/396 (48%), Gaps = 16/396 (4%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           VP +   N+++ +    G +     L+  +L  G  PNV T + L++A+CK   L  A  
Sbjct: 8   VPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLAL- 66

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
             +L+  +D+  D + Y+  I G  + G   +G   L   + +    D    + ++  + 
Sbjct: 67  --DLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFC 124

Query: 330 GIGDVGRAVQTYDRMLNG--------GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
            IG V       D +++            PN+++Y+ LI   C+Q  L EA  L+ +++ 
Sbjct: 125 RIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMIS 184

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GDALR 439
               P ++TYSS+I+G CK G L +  +L   M K G+ P+ VV ++L++ L   G A  
Sbjct: 185 DGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWE 244

Query: 440 FFFQSVRMTLIP---NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
            F    +M +     +L +  TL+DG  +  ++ +   +F  +   N  P+ IT+T +I 
Sbjct: 245 SFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMID 304

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G    G +  A  L   M K+ + P+V+TYS+II+G  K   + V + + K M    + P
Sbjct: 305 GYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMP 364

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           +  IY  L++  +K    DAA+ L+ ++   GLE +
Sbjct: 365 NAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEEN 400



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 193/448 (43%), Gaps = 35/448 (7%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV-----DSNSVGQYYK 168
           +Y+ L++ + + G+   +  +   M++ GI         L++ L+     D+ SV  Y  
Sbjct: 438 NYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESV--YSG 495

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +           Y  ++N   ++G +ENA  +  ++     +PN +TCN ++  L   G+
Sbjct: 496 IRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGE 555

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  + + +LL G  PNV     L+NA  K  + +   Q++  ++ M L  +  +Y+ 
Sbjct: 556 TERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNS 615

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L   G  K    +L      G+  D V +++++  +     + +A+ TY +MLN G
Sbjct: 616 LITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEG 675

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P + +Y++L+ GL   G + +A  +  ++    L+P    Y++LI G  K G  ++  
Sbjct: 676 VSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAI 735

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
             Y  M+ +GL P     ++LI      G M  A     +     + PN   ++ L+ G 
Sbjct: 736 KFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGW 795

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C L +                +P+       +  I+ +   + A  LF +M ++G  P  
Sbjct: 796 CNLSK----------------QPE-------LDRISKKTYRTEARTLFAEMNEKGFVPCE 832

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMER 551
            T + I     +   +    HM K M +
Sbjct: 833 NTLACISSTFARPGMVVDAKHMLKDMYK 860



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/354 (20%), Positives = 143/354 (40%), Gaps = 51/354 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  Y + GK++ +++++  M    +  +      L+  L  +    +   +   M 
Sbjct: 508 YNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEML 567

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G C    ++  L+N   +    +    MH++++  G   N    N ++  LC  G   
Sbjct: 568 LWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTK 627

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ + + +   G   + VT++ LI+   K + +EKA   Y  M+   + P +  Y++L+
Sbjct: 628 RATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLL 687

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL  AG + +  E+L    D GL  D  ++++++  +  IG+   A++ Y  M+  G +
Sbjct: 688 GGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLV 747

Query: 351 P-----------------------------------NVISYSILIKGLC---QQGRL--- 369
           P                                   N  +Y ILI G C   +Q  L   
Sbjct: 748 PKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRI 807

Query: 370 ------VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
                  EA  LF ++  +   P   T + +   F + G + D   +  +M KR
Sbjct: 808 SKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDMYKR 861



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 18/248 (7%)

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
           P+L  ++ LI  F  +G +   + LY  M+  G+ P+    ++L++       +    S+
Sbjct: 9   PTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAW----CKMGHLSL 64

Query: 446 RMTLIPNLFI------FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            + LI N+ I      +NT + G C+   A        +M   +   D  T  +L++G  
Sbjct: 65  ALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFC 124

Query: 500 SQGSLSSAILLFFQMLK--------RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             GS+     +   ++           L P+++TY+ +I    K   +S  L +++ M  
Sbjct: 125 RIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMIS 184

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLI 611
           +G  PD+  Y+ ++N L K   L  A  L  ++   G+ P+ + Y  ++       S   
Sbjct: 185 DGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWE 244

Query: 612 DGYFKSQI 619
              ++SQ+
Sbjct: 245 SFIYQSQM 252


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 235/502 (46%), Gaps = 41/502 (8%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           +LF++      C Y+ L++     G+I ++ ++F  M+       PD+V           
Sbjct: 243 QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS-----PPDVV----------- 286

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
                              Y  +++G      +E A  +  ++  RG   N V    ++ 
Sbjct: 287 ------------------TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  GQ+ +A  + + +++ G   +   F+T+++ FC++  L  A   ++ M +  L  
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D + Y+ LI+GL +AG LKE   +L    D+GL +D V ++ ++D Y  +G +  A   +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           ++M+     PNV++Y+ L  GLC+QG +  A  L  ++  + LE ++ TY+SLI+G CK+
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKA 508

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L        +M + GLKPD    + +I  L     +  A     + +   + P +  +
Sbjct: 509 GNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTY 568

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N LM+G C   R     +L   M   NI P+  T+  L++    + ++ S   ++  ML 
Sbjct: 569 NVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLS 628

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           + + P+  TY+ +I G  K +N+   L+    M   G     + YN L+ +L K+     
Sbjct: 629 QEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 577 ALKLFGQLTDRGL--EPDIITY 596
           A +LF ++    L  EPD+  +
Sbjct: 689 ARRLFEKMRKERLTAEPDVYNF 710



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 226/439 (51%), Gaps = 12/439 (2%)

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           N +L +  ++ A  + +++ ++    N  + N +LK LC  G+I +A  LFD +      
Sbjct: 230 NAVLCRLPLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASP 282

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+VVT+  +++ +C  ++LE A +L + M    L  + + Y+ +I  L   G++ +   +
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           +   +  G+ LD  VF++VM  +   GD+  A   +D M   G   + ++Y+ LI GLC+
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G L EA  +  ++  + L+   +TY+ LIDG+CK GK+ + F +++ M+++ + P+ V 
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 426 CSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            + L +GL   GD   A     +     L  N+F +N+L++G C+       ++  + M 
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              +KPDV T+T +I  +     L  A  L  +ML +G+ P ++TY+ +++G      + 
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            G  + + M    + P+   YN L+     E N+ +  +++  +  + + P+  TYN +I
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 601 CGYCSLNSCLIDGYFKSQI 619
            G+C   +     YF S++
Sbjct: 643 KGHCKARNMKEALYFHSEM 661



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 236/476 (49%), Gaps = 34/476 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++  Y  + +++ ++++ + M+  G+ L+P     +++ L D   V    ++   M 
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      V+  +M+G  RKG +  A +   ++ +RG   + VT   ++  LC  G++ 
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +   +   G   + VT++ LI+ +CK  K+ +AF ++N M++  + P+++ Y+ L 
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K G +   NELL     +GL+L++  ++S+++     G++ +A++T   M   G  
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +Y+ +I  LCQ   L  A  L  ++L + ++P+++TY+ L++GFC SG++  G  L
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            + M+++ + P                              N   +N+LM   C  K   
Sbjct: 588 LEWMLEKNIHP------------------------------NTTTYNSLMKQYCIEKNMK 617

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
            T +++  M    + P+  T+ +LI+G     ++  A+    +M+++G      +Y+A+I
Sbjct: 618 STTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
             L K K  +    +F+ M +  +  +  +YN  +++   E NL++ L L  +L +
Sbjct: 678 RLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 159/333 (47%), Gaps = 14/333 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  + +  L   G  Y+ LI    R G++ E+  +   M D G+    D+     + L+D
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL----DVDAVTYTVLID 433

Query: 160 SN-SVGQ-------YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
               VG+       + K+ +         Y  L +GL ++G +  A  +  ++  +G   
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           NI T N ++  LC  G +  A      +   G KP+V T++T+I A C+  +L++A  L 
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M++  + P ++ Y++L++G   +GR++ G  LL   L++ +  +   ++S+M  Y   
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
            ++    + Y  ML+   +PN  +Y+ILIKG C+   + EA     +++ +    +  +Y
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGL--KPD 422
           ++LI    K  K  +   L++ M K  L  +PD
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAEPD 706


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 245/495 (49%), Gaps = 37/495 (7%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           SF++  YV  G ++ ++E++    D+  YL PD++                   C A   
Sbjct: 138 SFVVGAYVDSGLVNRALELYHIAYDIHNYL-PDVIA------------------CNA--- 175

Query: 176 KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASS 234
                   L+N L+++  +E A  ++ ++++R G   N   C  +++ LC   ++     
Sbjct: 176 --------LLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVC-IMVRGLCKERKVEEGRK 226

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L +     G  PN+V ++TL++ + K   +E+A  L+  +     +P    Y I+I+GL 
Sbjct: 227 LINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLC 286

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K    K  + LL+   +RG+ ++V V++S++DA +  G      +T   +   G  P++ 
Sbjct: 287 KKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDIT 346

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI G C+ G++ EA  L    + R L P+ L+Y+ LI  +CK GK    F L+  M
Sbjct: 347 TYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGM 406

Query: 415 IKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            ++G   D V    L++GL+       AL    + V   ++P+  ++N LM+G C+  R 
Sbjct: 407 TEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRL 466

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           +    L + M   N+  D      L+ G    G L  A  LF   + +G+ P V+ Y+A+
Sbjct: 467 SAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAM 526

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  K   ++  L   + M+    +PD   Y+ +++  +K+ +L  ALKLFGQ+  +  
Sbjct: 527 IKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKC 586

Query: 590 EPDIITYNTIICGYC 604
           +P+++TY ++I G+C
Sbjct: 587 KPNVVTYTSLINGFC 601



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 140/581 (24%), Positives = 266/581 (45%), Gaps = 47/581 (8%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFF------------------RLFRDSLGDF 111
           L++ L+Q    ++A  V+++MV + G   N+                   +L  D  G  
Sbjct: 176 LLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGK- 234

Query: 112 GCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           GC      Y+ L++ Y + G ++ +  +F  +   G   + +    +++ L    +    
Sbjct: 235 GCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAV 294

Query: 167 YKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
             L   M+ +G      VY  +++  ++ G         R + + G  P+I T N ++  
Sbjct: 295 DGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISG 354

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
            C +G++  A  L +  +  G  PN ++++ LI+ +CK+ K  +AF L+  M E     D
Sbjct: 355 SCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLD 414

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           L+ Y  L+ GL  AG +     +    ++RG+  D  V++ +M+     G +  A     
Sbjct: 415 LVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLV 474

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            ML+     +    + L+ G  + G+L EA  LF   + + ++P ++ Y+++I G+CK G
Sbjct: 475 EMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFG 534

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
            + D  +    M      PD    S +I+G      + +AL+ F Q V+    PN+  + 
Sbjct: 535 MMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYT 594

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           +L++G CR   ++   K F  M    +KP+V+T+T+LI     +G +S A   F  ML  
Sbjct: 595 SLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLN 654

Query: 518 GLTPDVITYSAIIHGLFKGKNISVG--------------LHMFKLMERNGVAPDIAIYNV 563
              P+ +T++ +I+GL      +V               +  F+ M  +G    +A YN 
Sbjct: 655 RCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNS 714

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +L  L     ++AAL+L  ++T +G+ PD +++  ++ G C
Sbjct: 715 VLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLC 755



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 130/272 (47%), Gaps = 18/272 (6%)

Query: 118 LIENYVRIGKIDESVEIF----AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           L++ ++R GK+DE+ ++F    A   D G+     +++      + ++++    ++    
Sbjct: 491 LVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGD 550

Query: 174 RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  +++G +++  + NA  +  Q++++   PN+VT   ++   C  G    A 
Sbjct: 551 HSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAE 610

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             F+ +   G KPNVVT++ LI  FCKE K+ KA   + LM+    +P+ + ++ LI+GL
Sbjct: 611 KTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGL 670

Query: 294 ---FKAGRLKEGNELL-----------LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
                     + NE L            T +  G +  V  ++SV+        V  A+Q
Sbjct: 671 TNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQ 730

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
             D+M   G  P+ +S++ L+ GLC +GR  E
Sbjct: 731 LRDKMTGKGIFPDPVSFAALVYGLCLEGRSKE 762



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 33/312 (10%)

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSIL 359
           E   LL T   + L       S V+ AYV  G V RA++ Y    +   +LP+VI+ + L
Sbjct: 117 EVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNAL 176

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  L QQ ++  A  ++ +++ R       +   ++ G CK  K+ +G  L ++   +G 
Sbjct: 177 LNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGC 236

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
                                         IPN+  +NTL+DG  +         LF  +
Sbjct: 237 ------------------------------IPNIVFYNTLVDGYWKRGDVERANGLFKEL 266

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKN 538
            M    P   T+ ++I G+  + +  +   L  +M +RG+  +V  Y++I+    K G  
Sbjct: 267 KMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCK 326

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           I VG    + +  NG  PDI  YN L++   ++  +  A +L      RGL P+ ++Y  
Sbjct: 327 IEVG-KTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTP 385

Query: 599 IICGYCSLNSCL 610
           +I  YC    CL
Sbjct: 386 LIHVYCKQGKCL 397


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 145/602 (24%), Positives = 264/602 (43%), Gaps = 76/602 (12%)

Query: 10  TVWRSINKCYCSESKTHISDLQFNQANAILANLIKTN-NPTPAIQFFKWTHN----CVSS 64
           T+   ++K + SE K H   L+  +    L  L+    +    ++FFKW+          
Sbjct: 22  TISELLSKQHWSELKPH---LRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGL 78

Query: 65  PNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYN--FFRLFRDS--LGDFGCDYSFLIE 120
              ++++H L  S          D  V     T +  F  L  D    G        L+ 
Sbjct: 79  EPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVL 138

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV 180
            YV+  ++  + E F    D G  LS      L+S LV  N +G                
Sbjct: 139 AYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIG---------------- 182

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
                          +  ++++++I+R    N+ T N  +  LC  G++  A    + + 
Sbjct: 183 ---------------DVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMK 227

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM---DLVPDLIIYSILIDGLFKAG 297
             G  PNVVT++TL++ +CK     K ++    M EM    + P+ + ++ LIDG  K  
Sbjct: 228 AWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDE 287

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            +    +       +GLK ++V ++S+++     G +  A+  +D+M+  G  PN+++Y+
Sbjct: 288 NVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYN 347

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G C++  + EA  +F  V  + L P+++T++++ID +CK G + +GFSL  +M+  
Sbjct: 348 ALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDE 407

Query: 418 GLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
           G+                              +PN+  +N L+ G CR +      +L  
Sbjct: 408 GI------------------------------LPNVSTYNCLIAGLCRKQDLQAAKELLN 437

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    +K DV+T+ +LI G+       +A  L  +M   GL P+ +TY+ ++ G     
Sbjct: 438 EMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEG 497

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +   L++   ME+    P++  YNVL+    K   L+AA  L  ++ ++GL P+  TY+
Sbjct: 498 KLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD 557

Query: 598 TI 599
            +
Sbjct: 558 IV 559



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 196/373 (52%), Gaps = 8/373 (2%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G K ++ + + L++A  KE K+     +Y  M++  +  +L  ++I I+GL +AG+L + 
Sbjct: 160 GFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 219

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR---AVQTYDRMLNGGFLPNVISYSIL 359
            + +      G+  +VV +++++D Y   G  G+   A      ML     PN ++++ L
Sbjct: 220 EDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTL 279

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+   +  A   F ++  + L+P+++TY+SLI+G C +GKL +   L+D M+  GL
Sbjct: 280 IDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL 339

Query: 420 KPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KP+ V  + LING     +M +A + F    +  L+PN+  FNT++D  C+     +   
Sbjct: 340 KPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFS 399

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M    I P+V T+  LI G+  +  L +A  L  +M  +GL  DV+TY+ +I GL 
Sbjct: 400 LCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLC 459

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K         +   M   G+ P+   YN L++    E  L AAL +  ++     +P+++
Sbjct: 460 KNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVV 519

Query: 595 TYNTIICGYCSLN 607
           TYN +I GYC +N
Sbjct: 520 TYNVLIKGYCKIN 532



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 195/382 (51%), Gaps = 10/382 (2%)

Query: 233 SSLFDVLLLVGPKPNVVTF--STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           SS+F  LLL G +P         L+ A+ K  +L  A++ +    +      L   + L+
Sbjct: 113 SSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLL 172

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K  ++ +   +    + R +  ++  F+  ++     G + +A    + M   G  
Sbjct: 173 SALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGIS 232

Query: 351 PNVISYSILIKGLCQQG---RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           PNV++Y+ L+ G C++G   ++ +A     ++L  ++ P+ +T+++LIDGFCK   +   
Sbjct: 233 PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAA 292

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
              ++ M K+GLKP+ V  + LINGL     + +A+  + + V + L PN+  +N L++G
Sbjct: 293 KKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+ K   +  K+F  +    + P+VIT   +I     +G +     L   ML  G+ P+
Sbjct: 353 FCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPN 412

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TY+ +I GL + +++     +   ME  G+  D+  YN+L++ L K      A KL  
Sbjct: 413 VSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLN 472

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
           ++ + GL+P+ +TYNT++ GYC
Sbjct: 473 EMFNLGLKPNHVTYNTLMDGYC 494



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 24/107 (22%), Positives = 49/107 (45%)

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A   F +    G    + + + ++  L K   I    +++K M +  +  ++  +N
Sbjct: 145 ELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFN 204

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           + +N L +   L+ A      +   G+ P+++TYNT++ GYC   S 
Sbjct: 205 IFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSA 251


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 224/431 (51%), Gaps = 13/431 (3%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV---PNIVTCNKILKRLCINGQIGN 231
           GK F     ++N ++++G+   A   +  VI    V   PN++T N ++K +C  G + +
Sbjct: 161 GKSF---NSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDD 217

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  +F  + +   +P+V T+ TL++  CK  ++++A  L + M      P  + +++LI+
Sbjct: 218 AIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLIN 277

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL K G L    +L+     +G   + V +++++      G + +A+   DRM++   +P
Sbjct: 278 GLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP 337

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV++Y  +I GL +QGR ++   +   +  R    +   YS+LI G  K GK ++   L+
Sbjct: 338 NVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLF 397

Query: 412 DNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M  +G + + +V S +I+GL       DA+    +       PN +  ++LM G    
Sbjct: 398 KEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEA 457

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
             +   V+++  M  +N   + + ++VLI G+   G +  A++++ QML +G  PDV+ Y
Sbjct: 458 GNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAY 517

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNG--VAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           S++I+GL     +   + ++  M   G    PD+  YN+LLN L K+ ++  A+ L   +
Sbjct: 518 SSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSM 577

Query: 585 TDRGLEPDIIT 595
            DRG +PD++T
Sbjct: 578 LDRGCDPDLVT 588



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 190/370 (51%), Gaps = 7/370 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNV+TF+ +I A CK   ++ A Q++  M      PD+  Y  L+DGL KA R+ E   L
Sbjct: 197 PNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSL 256

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L      G     V F+ +++     GD+ RA +  D M   G +PN ++Y+ LI GLC 
Sbjct: 257 LDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCL 316

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G+L +A  L  +++  +  P+++TY ++I+G  K G+  DG  +   M +RG   +  V
Sbjct: 317 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYV 376

Query: 426 CSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            S LI+GL  +     A+  F +        N  +++ ++DG CR  +  D V++   M 
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT 436

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                P+  T + L++G    G+   A+ ++  M K   T + + YS +IHGL K   + 
Sbjct: 437 NKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 496

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL--EPDIITYNT 598
             + ++  M   G  PD+  Y+ ++N L     ++ A++L+ ++  +G   +PD++TYN 
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNI 556

Query: 599 IICGYCSLNS 608
           ++   C  +S
Sbjct: 557 LLNTLCKQSS 566



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 223/485 (45%), Gaps = 68/485 (14%)

Query: 76  QSDMRDVASHVFDKMVIQF-----GKTYN-----------FFR---LFRDSLGDFGCD-- 114
           ++ + + A  +FD+M  +F     GK++N           F R    +   +G  G    
Sbjct: 137 KAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSIS 196

Query: 115 -----YSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPDLVQ--RLMSCLVDSNSVGQY 166
                ++ +I+   ++G +D+++++F    DM I    PD+     LM  L  ++ + + 
Sbjct: 197 PNVLTFNLVIKAMCKVGLVDDAIQVF---RDMTIRKCEPDVYTYCTLMDGLCKADRIDEA 253

Query: 167 YKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
             L   M+  G       +  L+NGL +KG +  A  +   +  +G +PN VT N ++  
Sbjct: 254 VSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHG 313

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC+ G++  A SL D ++     PNVVT+ T+IN   K+ +      +  LM E     +
Sbjct: 314 LCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVN 373

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
             +YS LI GLFK G+ +E   L      +G +L+ +V+S+V+D     G    AV+   
Sbjct: 374 EYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLS 433

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M N G  PN  + S L+KG  + G    A  ++  +       + + YS LI G CK G
Sbjct: 434 EMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDG 493

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           K+++   ++  M+ +G KPD V  S +INGL    L                        
Sbjct: 494 KVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGL------------------------ 529

Query: 463 CCRLKRATDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
                   D ++L+  ML    + +PDV+T+ +L+  +  Q S+S AI L   ML RG  
Sbjct: 530 ------VEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCD 583

Query: 521 PDVIT 525
           PD++T
Sbjct: 584 PDLVT 588



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 195/396 (49%), Gaps = 7/396 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  ++  + + G++++A  + R +  R   P++ T   ++  LC   +I  A SL D +
Sbjct: 201 TFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEM 260

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
            + G  P+ VTF+ LIN  CK+  L +A +L + M     +P+ + Y+ LI GL   G+L
Sbjct: 261 QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKL 320

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++   LL   +      +VV + ++++  V  G           M   G+  N   YS L
Sbjct: 321 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTL 380

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GL ++G+  EA  LF ++ ++  E + + YS++IDG C+ GK  D   +   M  +G 
Sbjct: 381 ISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGC 440

Query: 420 KPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+A  CS L+ G         A+  +    +     N   ++ L+ G C+  +  + + 
Sbjct: 441 TPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 500

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL--TPDVITYSAIIHG 532
           ++  M     KPDV+ ++ +I G++  G +  A+ L+ +ML +G    PDV+TY+ +++ 
Sbjct: 501 VWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNT 560

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           L K  +IS  + +   M   G  PD+    + L ML
Sbjct: 561 LCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML 596



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 152/291 (52%), Gaps = 8/291 (2%)

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNG---GFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           F+SV++  +  G   RA++ Y+ ++        PNV++++++IK +C+ G + +A  +F 
Sbjct: 164 FNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFR 223

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MG 435
            + IR+ EP + TY +L+DG CK+ ++ +  SL D M   G  P  V  ++LINGL   G
Sbjct: 224 DMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKG 283

Query: 436 DALRFFFQSVRMTL---IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
           D  R       M L   IPN   +NTL+ G C   +    + L   M      P+V+T+ 
Sbjct: 284 DLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYG 343

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            +I G+  QG       +   M +RG   +   YS +I GLFK       +H+FK M   
Sbjct: 344 TIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVK 403

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           G   +  +Y+ +++ L ++   D A+++  ++T++G  P+  T ++++ G+
Sbjct: 404 GYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGF 454



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 17/159 (10%)

Query: 463 CCRLKRATDTV-KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT- 520
           C R  ++ ++V  + +  G+++   +   H +  +G++   ++ +  L+   M K GL  
Sbjct: 157 CKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVD 216

Query: 521 ---------------PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
                          PDV TY  ++ GL K   I   + +   M+ +G  P    +NVL+
Sbjct: 217 DAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLI 276

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N L K+ +L  A KL   +  +G  P+ +TYNT+I G C
Sbjct: 277 NGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLC 315


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 206/404 (50%), Gaps = 5/404 (1%)

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           +Q    G  P++ T + ++   C    I  A S+F  +L  G  PN +T +TLI   C  
Sbjct: 81  KQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFR 140

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            +++KA   ++ ++      D + Y  LI+GL K G  K    LL       +K DVV++
Sbjct: 141 GEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMY 200

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++++      +G A   Y  M+  G  P+V++Y+ LI G C  G L EA  L  ++ +
Sbjct: 201 NTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKL 260

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           + + P++ T++ LID   K GK+++   L   M+K  +KPD    + LI+G      +  
Sbjct: 261 KNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKH 320

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A   F+   +  + P++  +  +++G C+ K   + + LF  M   N+ PD++T+  LI 
Sbjct: 321 AKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLID 380

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+     L  AI L  +M ++G+ PDV +Y+ ++ GL K   +     +F+ +   G   
Sbjct: 381 GLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHL 440

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           ++  Y VL+N L K    D AL L  ++ D+G  PD +T++ II
Sbjct: 441 NVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIII 484



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 226/446 (50%), Gaps = 9/446 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           ++S LV++        L +     G     C    L+N    +  I  AF +   +++RG
Sbjct: 63  ILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRG 122

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           F PN +T N ++K LC  G+I  A    D L+  G + + V++ TLIN  CK  + +   
Sbjct: 123 FHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVA 182

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           +L   +    + PD+++Y+ +I+ L K   L +  ++    + +G+  DVV +++++  +
Sbjct: 183 RLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGF 242

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             +G +  A    + M      PNV +++ILI  L ++G++ EA  L   ++   ++P +
Sbjct: 243 CIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDV 302

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
            TY+SLIDG+    +++    ++ +M +RG+ PD    + +INGL     + +A+  F +
Sbjct: 303 FTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEE 362

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                +IP++  +N+L+DG C+       + L   M    I+PDV ++T+L+ G+   G 
Sbjct: 363 MKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGR 422

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L  A  +F ++L +G   +V  Y+ +I+ L K       L +   ME  G  PD   +++
Sbjct: 423 LEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDI 482

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGL 589
           ++  L ++   D A K+  ++  RGL
Sbjct: 483 IIRALFEKDENDKAEKILREMIARGL 508



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 205/401 (51%), Gaps = 7/401 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P     N IL  L  N       SLF      G  P++ T S LIN FC +A +  AF +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           +  +++    P+ I  + LI GL   G +K+        + +G +LD V + ++++    
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 331 IGDVGRAVQTYDRMLNGGFL-PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            G+  +AV    R L G  + P+V+ Y+ +I  LC+   L +AC ++ +++++ + P ++
Sbjct: 175 TGET-KAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 233

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           TY++LI GFC  G L++ FSL + M  + + P+    ++LI+ L     M +A       
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM 293

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           ++  + P++F +N+L+DG   +        +F  M    + PDV  +T +I G+     +
Sbjct: 294 MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMV 353

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ LF +M  + + PD++TY+++I GL K  ++   + + K M+  G+ PD+  Y +L
Sbjct: 354 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTIL 413

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L+ L K   L+ A ++F +L  +G   ++  Y  +I   C 
Sbjct: 414 LDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCK 454



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 204/427 (47%), Gaps = 34/427 (7%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           C  S LI  +     I  +  +FA +   G + +   +  L+  L     + +       
Sbjct: 93  CTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQ 152

Query: 173 MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  +GF +    Y  L+NGL + G  +    + R++      P++V  N I+  LC N  
Sbjct: 153 LVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKL 212

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +G+A  ++  +++ G  P+VVT++TLI+ FC    L++AF L N M   ++ P++  ++I
Sbjct: 213 LGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNI 272

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID L K G++KE   LL   +   +K DV  ++S++D Y  + +V  A   +  M   G
Sbjct: 273 LIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRG 332

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V  Y+ +I GLC+   + EA  LF ++  + + P ++TY+SLIDG CK+  L    
Sbjct: 333 VTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAI 392

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           +L   M ++G++PD                              ++ +  L+DG C+  R
Sbjct: 393 ALCKRMKEQGIQPD------------------------------VYSYTILLDGLCKSGR 422

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             D  ++F  +       +V  +TVLI  +   G    A+ L  +M  +G  PD +T+  
Sbjct: 423 LEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDI 482

Query: 529 IIHGLFK 535
           II  LF+
Sbjct: 483 IIRALFE 489



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 191/379 (50%), Gaps = 5/379 (1%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A + F+++LL+ P P    F+ ++++            L+       + PDL   SILI+
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
                  +     +    L RG   + +  ++++      G++ +A+  +D+++  GF  
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           + +SY  LI GLC+ G       L  ++    ++P ++ Y+++I+  CK+  L D   +Y
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 412 DNMIKRGLKPDAVVCSLLING--LMG---DALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             MI +G+ PD V  + LI+G  +MG   +A     +     + PN+  FN L+D   + 
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  +   L  +M    IKPDV T+  LI G      +  A  +F+ M +RG+TPDV  Y
Sbjct: 281 GKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCY 340

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I+GL K K +   + +F+ M+   + PDI  YN L++ L K  +L+ A+ L  ++ +
Sbjct: 341 TNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKE 400

Query: 587 RGLEPDIITYNTIICGYCS 605
           +G++PD+ +Y  ++ G C 
Sbjct: 401 QGIQPDVYSYTILLDGLCK 419



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 8/244 (3%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSC--LVDSNSVGQYYK 168
           C ++ LI+   + GK+ E+  + A M  M   + PD+     L+    LVD     +Y  
Sbjct: 268 CTFNILIDALSKEGKMKEAKILLAVM--MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVF 325

Query: 169 LCRAMRG--KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
              A RG       Y  ++NGL +  +++ A  +  ++  +  +P+IVT N ++  LC N
Sbjct: 326 YSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKN 385

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
             +  A +L   +   G +P+V +++ L++  CK  +LE A +++  ++      ++  Y
Sbjct: 386 HHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAY 445

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++LI+ L KAG   E  +L     D+G   D V F  ++ A     +  +A +    M+ 
Sbjct: 446 TVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIA 505

Query: 347 GGFL 350
            G L
Sbjct: 506 RGLL 509



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 88/184 (47%), Gaps = 9/184 (4%)

Query: 105 RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNS 162
           R    D  C Y+ +I    +   +DE++ +F  M    +   PD+V    L+  L  ++ 
Sbjct: 331 RGVTPDVQC-YTNMINGLCKTKMVDEAMSLFEEMKHKNMI--PDIVTYNSLIDGLCKNHH 387

Query: 163 VGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           + +   LC+ M+ +G       Y  L++GL + G +E+A  + ++++ +G+  N+     
Sbjct: 388 LERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTV 447

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++ RLC  G    A  L   +   G  P+ VTF  +I A  ++ + +KA ++   M+   
Sbjct: 448 LINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARG 507

Query: 279 LVPD 282
           L+ +
Sbjct: 508 LLKE 511


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 229/464 (49%), Gaps = 37/464 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++ G  + G++  AF     ++++    + +TCN ++K  C  G       + D L
Sbjct: 79  TYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNL 138

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G   +V+ F+TLI+ +CK  ++  A  L   M +  L+ D++ Y+ LI+G  K G  
Sbjct: 139 VSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEY 198

Query: 300 KEGNELLLT-ALDRGLK--------------------LDVVVFSSVMDAYVGIGDVGRAV 338
            +   LL   +  RG+K                     D++ +++++  Y     +  A 
Sbjct: 199 DKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEAR 258

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             Y+ M+  GFLP+V++YS ++ GLC+ GRL EA  L  ++    ++P+ + Y++LID  
Sbjct: 259 ALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSL 318

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNL 453
            K+G   + F+    ++ RG+  D V+C+ L++GL       +A   F    ++ LIPN 
Sbjct: 319 FKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNS 378

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +  L+DG C++        L   M   +I P+VIT++ +I G   +G L  AI +  +
Sbjct: 379 ITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKK 438

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           ML + + P+   Y+ +I G  K     +   ++  M+ +G+  +  +++VL+N L +   
Sbjct: 439 MLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKR 498

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
           +D A +L   +T RGL  D + Y +           L+DG+FK+
Sbjct: 499 MDEAEELLKDVTSRGLLLDHVNYTS-----------LMDGFFKA 531



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 149/609 (24%), Positives = 264/609 (43%), Gaps = 119/609 (19%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS ++    + G++ E+ E+   M  MG+  +      L+  L  + S  + +     + 
Sbjct: 276 YSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLV 335

Query: 175 GKGFCVY----EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G  +       L++GL +    + A  M R + +   +PN +T   ++   C  G + 
Sbjct: 336 VRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDME 395

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
              SL   +      PNV+T+S++IN + K+  L++A  +   M++ +++P+  +Y+ILI
Sbjct: 396 RVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILI 455

Query: 291 DGLFKAG-----------------------------------RLKEGNELLLTALDRGLK 315
           DG  KAG                                   R+ E  ELL     RGL 
Sbjct: 456 DGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLL 515

Query: 316 LDVVVFSSVMDAYVGIGDVGRA---------------VQTYDRMLNG------------- 347
           LD V ++S+MD +   G    A               V TY+ ++NG             
Sbjct: 516 LDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVY 575

Query: 348 ------GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
                 G  PN  +Y+I+IK  C+QG L  A  L+ ++   ++ PS +T ++L+ G  ++
Sbjct: 576 SGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEA 635

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIF 456
           G++    ++ + M   G+ P+ V+  +L+N     G     L+   Q V M L  N   +
Sbjct: 636 GEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAY 695

Query: 457 NTLMDGCCRL---KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
           N L+   CRL   K+AT  +K  +  G      D +T+  LIRG      +  A+  + Q
Sbjct: 696 NNLIVVFCRLRMTKKATSVLKYMIRDGFV---ADTVTYNALIRGYCESSHVKKALATYTQ 752

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD---------------- 557
           ML  G++P+++TY+ ++ GL     ++    +F  M+ NG+ PD                
Sbjct: 753 MLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGN 812

Query: 558 -------------------IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
                               + YNVL++   K   +D A +L  ++  RG+ P   TY+ 
Sbjct: 813 KKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDI 872

Query: 599 IICGYCSLN 607
           +ICG+C+L+
Sbjct: 873 LICGWCNLS 881



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 225/466 (48%), Gaps = 39/466 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++   ++  +E A  ++ ++I  GF+P++VT + I+  LC +G++  A  L   +
Sbjct: 240 TYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREM 299

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             +G  PN V ++TLI++  K     +AF   + ++   +  DL++ + L+DGLFK+ + 
Sbjct: 300 KKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKP 359

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE  ++        L  + + +++++D Y  +GD+ R       M      PNVI+YS +
Sbjct: 360 KEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSI 419

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G  ++G L EA  +  ++L + + P+   Y+ LIDG+CK+GK      LY+ M   GL
Sbjct: 420 INGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGL 479

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           K + V+  +L+N L     M +A           L+ +   + +LMDG  +  + +  + 
Sbjct: 480 KVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALN 539

Query: 475 LFMLMGMYNIKPDVITHTVLIRGI----------------------------------AS 500
           +   M   +I  DV+T+ VLI G+                                    
Sbjct: 540 MVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCK 599

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           QG L +A+ L+ +M    + P  IT + ++ GL +   I   +++   M   G+ P++ I
Sbjct: 600 QGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVI 659

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + VLLN   K    +A L++  QL D GL+ +   YN +I  +C L
Sbjct: 660 HRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRL 705



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 233/469 (49%), Gaps = 41/469 (8%)

Query: 169 LCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQ-RG--------------- 208
           L   MR +G       Y  L+NG  ++G  + A  +  ++ + RG               
Sbjct: 169 LVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKK 228

Query: 209 -----FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
                   +++T   I+   C    +  A +L++ +++ G  P+VVT+S+++N  CK+ +
Sbjct: 229 DDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGR 288

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L +A +L   M +M + P+ + Y+ LID LFKAG   E        + RG+ LD+V+ ++
Sbjct: 289 LSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTT 348

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D          A   +  +     +PN I+Y+ LI G C+ G +     L  ++  + 
Sbjct: 349 LVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKH 408

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----MGDALR 439
           + P+++TYSS+I+G+ K G L +  ++   M+ + + P+A V ++LI+G       +   
Sbjct: 409 INPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIAT 468

Query: 440 FFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             +  ++++ L  N  +F+ L++   R KR  +  +L   +    +  D + +T L+ G 
Sbjct: 469 DLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGF 528

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAII-----HGLFKGKNISVGLHMFKLMERNG 553
              G  S+A+ +  +M ++ +  DV+TY+ +I     HG ++ K++  G      M   G
Sbjct: 529 FKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSG------MIEMG 582

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +AP+ A YN+++    K+  LD AL+L+ ++    + P  IT NT++ G
Sbjct: 583 LAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVG 631



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 211/439 (48%), Gaps = 29/439 (6%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G++     ++ +++     PN+ T N ++   C   ++GN     D+L  V  + + VT+
Sbjct: 24  GLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWC---KMGNLILALDLLRNVDVEVDTVTY 80

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           +T+I  FC+   + +AF   ++M++ D   D I  +IL+ G  + G  K G  ++   + 
Sbjct: 81  NTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVS 140

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G   DV+ F++++D Y   G++  A+   +RM   G L +++SY+ LI G C++G   +
Sbjct: 141 GGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDK 200

Query: 372 ACGLFGQVLIRR---------------------LEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           A  L  ++   R                     LE  L+TY+++I  +CK   L +  +L
Sbjct: 201 AKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARAL 260

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           Y+ MI  G  PD V  S ++NGL     + +A     +  +M + PN   + TL+D   +
Sbjct: 261 YEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFK 320

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
              A +       + +  +  D++  T L+ G+        A  +F  + K  L P+ IT
Sbjct: 321 AGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSIT 380

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+A+I G  K  ++     + + ME   + P++  Y+ ++N   K+  LD A+ +  ++ 
Sbjct: 381 YTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKML 440

Query: 586 DRGLEPDIITYNTIICGYC 604
           D+ + P+   Y  +I GYC
Sbjct: 441 DQNIIPNAYVYAILIDGYC 459



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 176/401 (43%), Gaps = 45/401 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  L+ N  R  ++DE+ E+   ++  G+ L       LM     +        +   M 
Sbjct: 486 FDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMT 545

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K        Y  L+NGLL  G  E A  ++  +I+ G  PN  T N ++K  C  G++ 
Sbjct: 546 EKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELD 604

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA  L++ +      P+ +T +TL+    +  ++EKA  + N M  M + P+L+I+ +L+
Sbjct: 605 NALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLL 664

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKL---------------------------------- 316
           +   K+G+     ++    +D GLK+                                  
Sbjct: 665 NASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFV 724

Query: 317 -DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D V +++++  Y     V +A+ TY +MLN G  PN+++Y++L+ GL   G + E   L
Sbjct: 725 ADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDEL 784

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
           F ++    L P   TY +LI G+ K G  ++   LY  M+ +G  P     ++LI+    
Sbjct: 785 FDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAK 844

Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G M  A     +     + P+   ++ L+ G C L +  D
Sbjct: 845 VGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPD 885



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 127/315 (40%), Gaps = 58/315 (18%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M     +P ++ ++ LI      G + + C ++ ++L   + P++ T++ L+  +CK G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 404 L--------------------------------RDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           L                                   F     M+K+    D + C++L+ 
Sbjct: 61  LILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVK 120

Query: 432 GLMGDALRFFFQSVRMTLIP-----NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           G     L  + + +   L+      ++  FNTL+DG C+    +  + L   M    +  
Sbjct: 121 GFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLS 180

Query: 487 DVITHTVLIRGIASQGSLSSAILL--------------FFQMLKR-------GLTPDVIT 525
           D++++  LI G   +G    A  L              FF +  R        L  D+IT
Sbjct: 181 DIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLIT 240

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ II    K   +     +++ M  NG  PD+  Y+ ++N L K+  L  A +L  ++ 
Sbjct: 241 YTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMK 300

Query: 586 DRGLEPDIITYNTII 600
             G++P+ + Y T+I
Sbjct: 301 KMGVDPNHVAYTTLI 315


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 217/402 (53%), Gaps = 10/402 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+  L + G+++ A ++ R++     +P +  CN +L  L    + G A  LFD +L  G
Sbjct: 125 LVIALSQMGLLDEALYVFRRLRT---LPALPACNAVLDGLVKARRPGCAWELFDEMLRRG 181

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVT++TLINA   +  + KA ++++ M+   + P+++ Y+ +I  L + G + +  
Sbjct: 182 LVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAE 241

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L     + G++ +   ++ +M  +    DV  AV  Y  +L  G  PN + ++ LI G 
Sbjct: 242 RLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGF 301

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+  R  EA G+F ++    + P++  Y+SL+DG  +SG  ++  +LY  M + GL PD 
Sbjct: 302 CKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDE 361

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFM 477
             CS+++ GL     M  A R F Q V+   +  N   +N L+D  CR+    + +    
Sbjct: 362 FTCSIVVRGLCDGGQMHVADR-FLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCT 420

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I+P+V++++ LI G + +G +  A+ ++ +M+ +G+ P+V+TY+A+IHG  K  
Sbjct: 421 RMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNG 480

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            I     + K M  NG++P+    +VL++ L +E  +  A++
Sbjct: 481 GIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVR 522



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 222/450 (49%), Gaps = 30/450 (6%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCL 157
           F  + R  L      Y+ LI      G + ++ E++  M  +   + P++V    ++  L
Sbjct: 174 FDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQM--VAQQIDPNVVTYTTMICAL 231

Query: 158 VDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
            +   +G   +L  AM+  G       Y  LM+G  ++  + +A  +++++++ G  PN 
Sbjct: 232 CEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNA 291

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           V    ++   C   +   A  +F  +   G  P V  +++L++   +    ++A  LY  
Sbjct: 292 VIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQE 351

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M  + L PD    SI++ GL   G++   +  L    + G+ L+   +++++D Y  IG+
Sbjct: 352 MTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGN 411

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           +  A+ T  RM   G  PNV+SYS LI G  ++G++  A  ++ +++ + +EP+++TY++
Sbjct: 412 LEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTA 471

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF------- 441
           LI G  K+G +   F L+  MI+ G+ P+A+  S+L++GL     + +A+RF        
Sbjct: 472 LIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLK 531

Query: 442 ----------FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
                     F      LIPN  I+ TL+ G     +  +  KLF  M    + PD  T+
Sbjct: 532 CSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTY 591

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           T+LIRG    G + +A++L+  M+K G+ P
Sbjct: 592 TLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 221/494 (44%), Gaps = 64/494 (12%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC---- 179
           ++G +DE++ +F  +  +    + + V   +  LV +   G  ++L   M  +G      
Sbjct: 131 QMGLLDEALYVFRRLRTLPALPACNAV---LDGLVKARRPGCAWELFDEMLRRGLVPSVV 187

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+N    +G +  A  +  Q++ +   PN+VT   ++  LC  G IG+A  LFD +
Sbjct: 188 TYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAM 247

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +PN  T++ L++  C+   +  A  LY  +++  L P+ +I++ LIDG  KA R 
Sbjct: 248 KEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRF 307

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   + L     G+   V V++S+MD     G+   A+  Y  M   G  P+  + SI+
Sbjct: 308 SEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIV 367

Query: 360 IKGLCQQGR-----------------------------------LVEACGLFGQVLIRRL 384
           ++GLC  G+                                   L EA     ++    +
Sbjct: 368 VRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGI 427

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALR 439
           EP++++YSSLIDG  K GK++   ++Y  M+ +G++P+ V  + LI     NG +  A R
Sbjct: 428 EPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFR 487

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM------------LMGMYNIK-- 485
              + +   + PN    + L+DG CR  R  + V+  M            +   + I+  
Sbjct: 488 LHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEE 547

Query: 486 ---PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
              P+ + +  LI G+   G    A  LF  M K G+ PD  TY+ +I G      +   
Sbjct: 548 CLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNA 607

Query: 543 LHMFKLMERNGVAP 556
           + ++  M + GV P
Sbjct: 608 MMLYADMMKIGVKP 621



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 193/404 (47%), Gaps = 46/404 (11%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P P       L+ A  +   L++A  ++     +  +P L   + ++DGL KA R     
Sbjct: 118 PAP---ALGVLVIALSQMGLLDEALYVFR---RLRTLPALPACNAVLDGLVKARRPGCAW 171

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL    L RGL   VV ++++++A    G V +A + +D+M+     PNV++Y+ +I  L
Sbjct: 172 ELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICAL 231

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G + +A  LF  +    ++P+  TY+ L+ G C+   +     LY  ++K GL P+A
Sbjct: 232 CEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNA 291

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V+ + LI+G        +A   F +  R  + P + ++N+LMDG  R   A + + L+  
Sbjct: 292 VIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQE 351

Query: 479 MGMYNIKPDVITHTVLIRGIASQG-----------------------------------S 503
           M    + PD  T ++++RG+   G                                   +
Sbjct: 352 MTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGN 411

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L  A+    +M + G+ P+V++YS++I G  K   + + + ++  M   G+ P++  Y  
Sbjct: 412 LEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTA 471

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++   K   +DAA +L  ++ + G+ P+ IT + ++ G C  N
Sbjct: 472 LIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCREN 515


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 225/490 (45%), Gaps = 72/490 (14%)

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           +K + E       ++I++GF+P++  CN +L+ L  +  +  A  +++ +++ G  P V+
Sbjct: 216 KKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVI 275

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           TF+T++++  K   LE+  +++  M   ++    + Y+ILI+G  K+G+++E        
Sbjct: 276 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDM 335

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
              G  +    F+ +++ Y   G    A    D MLN G  P   +Y+I I+ LC+ GR+
Sbjct: 336 QRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRI 395

Query: 370 -------------------------------VEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
                                          VEA  LF  +    + PS++TY++LIDG 
Sbjct: 396 DDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGL 455

Query: 399 CKSGKLR-------------------------DGF----------SLYDNMIKRGLKPDA 423
           C+SG L                           GF           +YD M+++G+KPD 
Sbjct: 456 CESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDG 515

Query: 424 VVCSLLING--LMGDALRFFFQSVRMTL----IPNLFIFNTLMDGCCRLKRATDTVKLFM 477
              +    G   +GD+ + F     M       P+L I+N  +DG C++      ++   
Sbjct: 516 YAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQR 575

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            +    + PD +T+T +IRG   +G    A  L+ +ML + L+P VITY  +IHG  K  
Sbjct: 576 KIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAG 635

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +         M++ GV P++  +N LL+ + K  N+D A +   ++ + G+ P+  +Y 
Sbjct: 636 RLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYT 695

Query: 598 TIICGYCSLN 607
            +I  +C L+
Sbjct: 696 ILISKHCDLD 705



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 195/431 (45%), Gaps = 14/431 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + + GK++E+      M   G  ++P     L+          + + +   M 
Sbjct: 312 YNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEML 371

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y   +  L   G I++A    R+++     P++V+ N ++       +  
Sbjct: 372 NAGIYPTTSTYNIYIRALCEFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMRKFV 427

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS LFD L      P++VT++TLI+  C+   LE A +L   M    + PD+I Y+ L+
Sbjct: 428 EASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLL 487

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML-NGGF 349
            G  K G L    E+    L +G+K D   +++     + +GD  +A + ++ M+     
Sbjct: 488 KGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHH 547

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P++  Y++ I GLC+ G L +A     ++    L P  +TY+++I G+ + G+ +    
Sbjct: 548 APDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARD 607

Query: 410 LYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           LYD M+ + L P  +   +LI+G      +  A ++  +  +  + PN+   N L+ G C
Sbjct: 608 LYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMC 667

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +     +  +    M    I P+  ++T+LI            + L+ +ML + + PD  
Sbjct: 668 KAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGY 727

Query: 525 TYSAIIHGLFK 535
           T+ A+   L K
Sbjct: 728 THRALFKHLEK 738



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 168/354 (47%), Gaps = 8/354 (2%)

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           + K++  EK    +  M+    +P +   +I++  L  +  + +  E+  T +  G+   
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           V+ F++++D+    GD+ R  + +  M       + ++Y+ILI G  + G++ EA    G
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHG 333

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-- 435
            +       +  +++ LI+G+CK G   + + + D M+  G+ P     ++ I  L    
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFG 393

Query: 436 --DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             D  R    S+     P++  +NTLM G  ++++  +   LF  +   NI P ++T+  
Sbjct: 394 RIDDARELLSSM---AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNT 450

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI G+   G+L  A  L  +M  + + PDVITY+ ++ G  K  N+S+   ++  M R G
Sbjct: 451 LIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKG 510

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSL 606
           + PD   Y       ++  + + A +L  ++  +    PD+  YN  I G C +
Sbjct: 511 IKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKV 564



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 150/364 (41%), Gaps = 48/364 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+  I      G+ID++ E+ + M+      +PD+V    LM   +      +   L   
Sbjct: 382 YNIYIRALCEFGRIDDARELLSSMA------APDVVSYNTLMHGYIKMRKFVEASLLFDD 435

Query: 173 MRG----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           ++          Y  L++GL   G +E A  +  ++  +   P+++T   +LK    NG 
Sbjct: 436 LKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGN 495

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTL---------------------------------- 254
           +  A+ ++D +L  G KP+   ++T                                   
Sbjct: 496 LSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYN 555

Query: 255 --INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
             I+  CK   LEKA +    +  + LVPD + Y+ +I G  + GR K   +L    L +
Sbjct: 556 VRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSK 615

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            L   V+ +  ++  +   G + +A Q    M   G  PNV++++ L+ G+C+ G + EA
Sbjct: 616 RLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEA 675

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
                ++    + P+  +Y+ LI   C   K  +   LY  M+ + ++PD      L   
Sbjct: 676 YRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKH 735

Query: 433 LMGD 436
           L  D
Sbjct: 736 LEKD 739


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 214/430 (49%), Gaps = 8/430 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  LM  L        A  + R +   G  P++VT   +++ LC    +  A  L + + 
Sbjct: 97  YTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMC 156

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G +PNVV +S L++ +CK  + E   +++  M    + PD+++Y+ LID L + G++K
Sbjct: 157 ESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVK 216

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +   ++    +RGL+ +VV ++ ++++    G V  A+     M   G  P+V++Y+ LI
Sbjct: 217 KAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLI 276

Query: 361 KGLCQQGRLVEACGLFGQVLI--RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            GL     + EA  L  +++    R+ P L+T++S+I G CK G +R    +   M + G
Sbjct: 277 TGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENG 336

Query: 419 LKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
            + + V  +LLI GL+       A+    +     L P+ F ++ L++G C++++     
Sbjct: 337 CRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAE 396

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
                M    ++P+ + +  L++ +  QG +  A  LF +M  R    D   YS +IHG 
Sbjct: 397 SYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGA 455

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           FK     +     K M   G+ PD   Y++ +NM  K  +L AA ++  Q+T  G  PD+
Sbjct: 456 FKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDV 515

Query: 594 ITYNTIICGY 603
             ++++I GY
Sbjct: 516 AVFDSLIQGY 525



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 117/496 (23%), Positives = 223/496 (44%), Gaps = 81/496 (16%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFV---PNIVTCNKILKRLCINGQIGNASSLFD 237
           Y  ++  L R+G ++ A  + R +     +   PN ++   +++ LC + +   A  L  
Sbjct: 59  YNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLR 118

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +   G +P+VVT+ TLI   C  A ++ A +L N M E  + P++++YS L+ G  K G
Sbjct: 119 SMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTG 178

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           R +   ++      RG++ DVV++++++D+    G V +A +  D M   G  PNV++Y+
Sbjct: 179 RWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYN 238

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIR----------------------------------- 382
           +LI  +C++G + EA  L   +  +                                   
Sbjct: 239 VLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQG 298

Query: 383 --RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----G 435
             R+ P L+T++S+I G CK G +R    +   M + G + + V  +LLI GL+      
Sbjct: 299 ETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVK 358

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
            A+    +     L P+ F ++ L++G C++++          M    ++P+ + +  L+
Sbjct: 359 KAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLL 418

Query: 496 RGIASQGSLSSAILLFFQM----------------------------------LKRGLTP 521
           + +  QG +  A  LF +M                                  +  GL P
Sbjct: 419 KAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIP 478

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D +TYS  I+   K  +++    + K M  +G  PD+A+++ L+     + + +  L+L 
Sbjct: 479 DAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELT 538

Query: 582 GQLT--DRGLEPDIIT 595
            ++T  D  L+P II+
Sbjct: 539 REMTAKDVALDPKIIS 554



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 183/365 (50%), Gaps = 35/365 (9%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV---PDLIIYSILIDGLFKAGRLKEGN 303
           + V+++T++ A C++  L+ A  L  +M     +   P+ I Y+ L+  L    R  +  
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            LL +  D G++ DVV + +++       DV  AV+  + M   G  PNV+ YS L+ G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+ GR      +F ++  R +EP ++ Y++LID  C+ GK++    + D M +RGL+P  
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEP-- 232

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
                                       N+  +N L++  C+     + + L   M    
Sbjct: 233 ----------------------------NVVTYNVLINSMCKEGSVREALDLRKNMSEKG 264

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLK--RGLTPDVITYSAIIHGLFKGKNISV 541
           ++PDV+T+  LI G++S   +  A+ L  +M++    + PD++T++++IHGL K   +  
Sbjct: 265 VQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQ 324

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L +  +M  NG   ++  +N+L+  L++   +  A++L  ++   GL+PD  TY+ +I 
Sbjct: 325 ALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILIN 384

Query: 602 GYCSL 606
           G+C +
Sbjct: 385 GFCKM 389



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 202/434 (46%), Gaps = 47/434 (10%)

Query: 188 LLRKGVIENAFHMHRQV------------IQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
           LLR+G  E A  ++R +                 V + V+ N +L  LC  G +  A  L
Sbjct: 19  LLRRGRGEAAARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAALFL 78

Query: 236 FDVL---LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             V+     +  +PN ++++TL+ A C + +  +A  L   M +  + PD++ Y  LI G
Sbjct: 79  LRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRG 138

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L  A  +    ELL    + G++ +VVV+S ++  Y   G      + ++ M   G  P+
Sbjct: 139 LCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPD 198

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V+ Y+ LI  LC+ G++ +A  +   +  R LEP+++TY+ LI+  CK G +R+   L  
Sbjct: 199 VVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRK 258

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           NM ++G++PD V                               +NTL+ G   +    + 
Sbjct: 259 NMSEKGVQPDVVT------------------------------YNTLITGLSSVLEMDEA 288

Query: 473 VKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + L   M+ G   ++PD++T   +I G+   G +  A+ +   M + G   +++ ++ +I
Sbjct: 289 MALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLI 348

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL +   +   + +   M  +G+ PD   Y++L+N   K   ++ A     ++  +G+E
Sbjct: 349 GGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGME 408

Query: 591 PDIITYNTIICGYC 604
           P+ + Y  ++   C
Sbjct: 409 PEPVHYIPLLKAMC 422



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 2/172 (1%)

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           LR      R+   PN   + TLM   C  +RA   V L   M    ++PDV+T+  LIRG
Sbjct: 79  LRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRG 138

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAP 556
           +     + +A+ L  +M + G+ P+V+ YS ++HG  K G+  SVG  +F+ M   G+ P
Sbjct: 139 LCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVG-KVFEEMSGRGIEP 197

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           D+ +Y  L++ L +   +  A ++   +T+RGLEP+++TYN +I   C   S
Sbjct: 198 DVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGS 249


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 226/439 (51%), Gaps = 12/439 (2%)

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           N +L +  ++ A  + +++ ++    N  + N +LK LC  G+I +A  LFD +      
Sbjct: 230 NAVLCRLPLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASP 282

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+VVT+  +++ +C  ++LE A +L + M    L  + + Y+ +I  L   G++ +   +
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           +   +  G+ LD  VF++VM  +   GD+  A   +D M   G   + ++Y+ LI GLC+
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G L EA  +  ++  + L+   +TY+ LIDG+CK GK+ + F +++ M+++ + P+ V 
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 426 CSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            + L +GL   GD   A     +     L  N+F +N+L++G C+       ++  + M 
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              +KPDV T+T +I  +     L  A  L  +ML +G+ P ++TY+ +++G      + 
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            G  + + M    + P+   YN L+     E N+ +  +++  +  + + P+  TYN +I
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 601 CGYCSLNSCLIDGYFKSQI 619
            G+C   +     YF S++
Sbjct: 643 KGHCKARNMKEALYFHSEM 661



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 236/502 (47%), Gaps = 41/502 (8%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           +LF++      C Y+ L++     G+I ++ ++F  M+       PD+V           
Sbjct: 243 QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS-----PPDVV----------- 286

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
                              Y  +++G      +E A  +  ++  RG   N V    ++ 
Sbjct: 287 ------------------TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  GQ+ +A  + + +++ G   +   F+T+++ FC++  L  A   ++ M +  L  
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D + Y+ LI+GL +AG LKE   +L    D+GL +D V ++ ++D Y  +G +  A   +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           ++M+     PNV++Y+ L  GLC+QG +  A  L  ++  + LE ++ TY+SLI+G CK+
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKA 508

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L        +M + GLKPD    + +I  L     +  A     + +   + P +  +
Sbjct: 509 GNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTY 568

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N LM+G C   R     +L   M   NI P+  T+  L++    + ++ S   ++  ML 
Sbjct: 569 NVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLS 628

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           + + P+  TY+ +I G  K +N+   L+    M   G     + YN L+ +L K+     
Sbjct: 629 QEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 577 ALKLFGQL-TDR-GLEPDIITY 596
           A +LF ++  DR   EPD+  +
Sbjct: 689 ARRLFEKMRKDRLTAEPDVYNF 710



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 237/476 (49%), Gaps = 34/476 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++  Y  + +++ ++++ + M+  G+ L+P     +++ L D   V    ++   M 
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      V+  +M+G  RKG +  A +   ++ +RG   + VT   ++  LC  G++ 
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +   +   G   + VT++ LI+ +CK  K+ +AF ++N M++  + P+++ Y+ L 
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K G +   NELL     +GL+L++  ++S+++     G++ +A++T   M   G  
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +Y+ +I  LCQ   L  A  L  ++L + ++P+++TY+ L++GFC SG++  G  L
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            + M+++ + P                              N   +N+LM   C  K   
Sbjct: 588 LEWMLEKNIHP------------------------------NTTTYNSLMKQYCIEKNMK 617

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
            T +++  M    + P+  T+ +LI+G     ++  A+    +M+++G      +Y+A+I
Sbjct: 618 STTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
             L K K  +    +F+ M ++ +  +  +YN  +++   E NL++ L L  +L +
Sbjct: 678 RLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 159/333 (47%), Gaps = 14/333 (4%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  + +  L   G  Y+ LI    R G++ E+  +   M D G+    D+     + L+D
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL----DVDAVTYTVLID 433

Query: 160 SN-SVGQ-------YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
               VG+       + K+ +         Y  L +GL ++G +  A  +  ++  +G   
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           NI T N ++  LC  G +  A      +   G KP+V T++T+I A C+  +L++A  L 
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M++  + P ++ Y++L++G   +GR++ G  LL   L++ +  +   ++S+M  Y   
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
            ++    + Y  ML+   +PN  +Y+ILIKG C+   + EA     +++ +    +  +Y
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGL--KPD 422
           ++LI    K  K  +   L++ M K  L  +PD
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKDRLTAEPD 706


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 202/406 (49%), Gaps = 5/406 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   + +T N ++  LC    +    S+   +  +G +P V+T + LIN  C +  + +A
Sbjct: 107 GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQA 166

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L + M +M    D+  Y +LI+GL K G      E L    +R  K +VVV+S++MD 
Sbjct: 167 VGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDG 226

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G V  A+     M   G  PN+++Y+ LI+GLC  GR  E   L  +++   +   
Sbjct: 227 LCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLD 286

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
           L T + L+D FCK GK+    S+   MI  G  PD    + LI+       M +A+R F 
Sbjct: 287 LQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             V    +P++ +F +L+ G C+ K     + L   M      PDV+T T LI G    G
Sbjct: 347 LMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAG 406

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
              +A  LF  M K G  P++ T + I+ GL KG  +S  + + + ME++ +  +I IY+
Sbjct: 407 RPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYS 466

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +LL+ +     L+AA +LF  L  +GL+ ++ TY  +I G C   S
Sbjct: 467 ILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGS 512



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 234/505 (46%), Gaps = 11/505 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYM-SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           D++ L+   VR+     ++ +  ++ S +GI      +  +++CL     V   + +   
Sbjct: 78  DFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGT 137

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G          L+NGL  +G +  A  +   + +  +  ++ T   ++  LC  G 
Sbjct: 138 MFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGD 197

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A      +     KPNVV +ST+++  CK+  + +A  L + M    + P+L+ Y+ 
Sbjct: 198 TLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYAC 257

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL   GR KE   LL   +  G++LD+   + ++DA+   G V +A      M+  G
Sbjct: 258 LIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTG 317

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V +Y+ LI   C Q ++ EA  +F  ++ R   P ++ ++SLI G+CK   +    
Sbjct: 318 EGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVM 377

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L + M K G  PD V  + LI G         A   F    +   +PNL     ++DG 
Sbjct: 378 HLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGL 437

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+    ++ V L   M   N+  +++ +++L+ G+ S G L++A  LF  +  +GL  +V
Sbjct: 438 CKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINV 497

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ +I GL K  ++     +   ME NG  PD   YNV +  L+ +  +  ++K    
Sbjct: 498 YTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTI 557

Query: 584 LTDRGLEPDIITYNTIICGYCSLNS 608
           + D+G   D  T    I  Y S N 
Sbjct: 558 MRDKGFSVDAATTEITI-NYLSTNE 581



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 1/147 (0%)

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDV 523
           ++K   + + LF  M      P V   T+L+  I      ++AI L   +    G+  D 
Sbjct: 53  KVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADT 112

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           IT + +I+ L + K ++ G  +   M + G+ P +     L+N L  + N+  A+ L   
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDH 172

Query: 584 LTDRGLEPDIITYNTIICGYCSLNSCL 610
           +       D+ TY  +I G C     L
Sbjct: 173 MEKMRYPLDVYTYGVLINGLCKTGDTL 199


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 238/520 (45%), Gaps = 31/520 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+  +++  ++     I   M   G   +P L   L+    +       YKL   M 
Sbjct: 80  YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 139

Query: 175 G----KGFCVYEFLMNG------LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                 G+ VY   +        L    +++ A  ++ +++    V N V      + LC
Sbjct: 140 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 199

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   A  L   ++  G  P+  T+S +I   C   K+EKAF L+  M  + + PD+ 
Sbjct: 200 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 259

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ILID   KAG +++   L       G    VV +++++ AY+    V +A   + RM
Sbjct: 260 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 319

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL----------------IRRLEPSL 388
           ++ G  PN ++Y  L+ GLC+ G + +A  ++ +++                   L P++
Sbjct: 320 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 379

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +TY +L+DG CK+ K+     L D M+  G +P+ +V   LI+G      +  A   F Q
Sbjct: 380 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 439

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
             +   +P++  + +L+D   +  R    +K+   M   +  P+V+T+T +I G+   G 
Sbjct: 440 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 499

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A+ L   M ++G +P+V+TY+A+I GL K   I + L +F  M R G +P+   Y V
Sbjct: 500 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 559

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           L+N L     LD A  L G++        +  Y   I G+
Sbjct: 560 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 599



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 218/502 (43%), Gaps = 91/502 (18%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G  + AF + ++++++GFVP+  T +K++  LC   ++  A  LF  + +VG  P+V T+
Sbjct: 202 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 261

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + LI++FCK   +E+A  L+  M  +   P ++ Y+ LI    KA ++ + N++    +D
Sbjct: 262 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 321

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG----------------FLPNVIS 355
            G + + V + +++D     G++ +A + Y +++                     PNV++
Sbjct: 322 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 381

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  L+ GLC+  ++  A  L   +L    EP+ + Y +LIDGFCK+GK+     ++  M 
Sbjct: 382 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 441

Query: 416 KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           K G  P     + LI+ +  D     A++   Q ++ +  PN+  +  ++DG CR+  + 
Sbjct: 442 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 501

Query: 471 DTVKLFMLMGMYNIKPDVITHT-----------------------------------VLI 495
             +KL  LM      P+V+T+T                                   VLI
Sbjct: 502 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 561

Query: 496 RGIASQGSLSSAILLFFQMLKR---------------------------------GLTPD 522
             + + G L  A LL  +M +                                  G  P 
Sbjct: 562 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPI 621

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMER--NGVAPDIAIYNVLLNMLIKECNLDAALKL 580
              Y  +I    K   + + + + K M    + V  D  +Y  L+  L     ++ A +L
Sbjct: 622 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 681

Query: 581 FGQLTDRGLEPDIITYNTIICG 602
           + ++T RG  P++  +  +I G
Sbjct: 682 YSEMTRRGFVPELSVFVCLIKG 703



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 201/452 (44%), Gaps = 27/452 (5%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++GL+     + A     ++     +PN+VT   +L       Q+G    + ++++  G
Sbjct: 48  MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 107

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN   F++L++++C E     A++L N M      P  ++Y+I I  +    +L   +
Sbjct: 108 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 167

Query: 304 ELLLTA------LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            L L        L     L+ V  ++      G+G   +A Q    M+  GF+P+  +YS
Sbjct: 168 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 227

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I  LC   ++ +A  LF ++ +  + P + TY+ LID FCK+G +     L++ M   
Sbjct: 228 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 287

Query: 418 GLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G  P  V  + LI+  +       A   F + V     PN   +  L+DG C+    +  
Sbjct: 288 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 347

Query: 473 VKLFM-LMGM---------------YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            +++  L+G                + + P+V+T+  L+ G+     +  A  L   ML 
Sbjct: 348 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 407

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G  P+ I Y A+I G  K   I     +F  M + G  P +  Y  L++ + K+  LD 
Sbjct: 408 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 467

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           A+K+  Q+      P+++TY  +I G C +  
Sbjct: 468 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 499



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/537 (23%), Positives = 233/537 (43%), Gaps = 68/537 (12%)

Query: 119 IENYVR----IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           + N+ R    +GK D++ ++   M   G         ++++ L  +  V + + L + M+
Sbjct: 191 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 250

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++   + G+IE A  +  ++   G  P +VT   ++       Q+ 
Sbjct: 251 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 310

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM--------------- 275
            A+ +F  ++  G +PN VT+  L++  CK   + KAF++Y  ++               
Sbjct: 311 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 370

Query: 276 -EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
               L P+++ Y  L+DGL KA ++   +ELL   L  G + + +V+ +++D +   G +
Sbjct: 371 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 430

Query: 335 GRA---------------VQTY----DRMLNGGFL----------------PNVISYSIL 359
             A               V TY    DRM   G L                PNV++Y+ +
Sbjct: 431 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 490

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+ G   +A  L   +  +   P+++TY++LIDG  K+GK+     L+  M ++G 
Sbjct: 491 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 550

Query: 420 KPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPN-LFIFNTLMDGCCRLKRATDTVK 474
            P+ V   +LIN L      D  R     ++ T  P  L  +   + G    K    ++ 
Sbjct: 551 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG--FSKSFIASLG 608

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK--RGLTPDVITYSAIIHG 532
           +   M  Y   P    + +LI   +  G L  A+ L  +M++    +  D   Y+++I  
Sbjct: 609 ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQA 668

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           L     +     ++  M R G  P+++++  L+  L++    D AL+L   +   G+
Sbjct: 669 LCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 183/426 (42%), Gaps = 30/426 (7%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           + GF  +  T       LC  G+  +A    D++     K + V  + +I+   + +  +
Sbjct: 3   ESGFCMDRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFD 59

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A    + M     +P+++ Y  L+ G  K  +L     ++   +  G   +  +F+S++
Sbjct: 60  EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLV 119

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE------ACGLFGQV 379
            +Y    D   A +  +RM   G  P  + Y+I I  +C Q +L        A  ++G++
Sbjct: 120 HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 179

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD----AVVCSLLINGLMG 435
           L      + +  ++     C  GK    F L   M+++G  PD    + V + L +    
Sbjct: 180 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV 239

Query: 436 DALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
           +     FQ ++M  + P+++ +  L+D  C+         LF  M      P V+T+T L
Sbjct: 240 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTAL 299

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM--------- 545
           I        +  A  +F +M+  G  P+ +TY A++ GL K  NIS    +         
Sbjct: 300 IHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSD 359

Query: 546 -------FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
                  F   +R+ +AP++  Y  L++ L K   +D A +L   +   G EP+ I Y+ 
Sbjct: 360 SADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDA 419

Query: 599 IICGYC 604
           +I G+C
Sbjct: 420 LIDGFC 425



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 95/405 (23%), Positives = 162/405 (40%), Gaps = 42/405 (10%)

Query: 33  NQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDK 89
           ++A  + A LI T++   +  +F        +PN+     L+  L ++   D A  + D 
Sbjct: 345 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 404

Query: 90  MVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
           M+                    GC+     Y  LI+ + + GKID + E+F  M+  G  
Sbjct: 405 MLSS------------------GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 446

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFH 199
            S      L+  +     +    K+   M  K  C      Y  +++GL R G  E A  
Sbjct: 447 PSVHTYTSLIDRMFKDGRLDLAMKVLSQML-KDSCTPNVVTYTAMIDGLCRIGESEKALK 505

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +   + ++G  PN+VT   ++  L   G+I  +  LF  +   G  PN VT+  LIN  C
Sbjct: 506 LLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLC 565

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
               L+KA  L   M +      L  Y   I G  K+     G  +L      G      
Sbjct: 566 AAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG--ILEEMESYGTVPIAP 623

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS-----YSILIKGLCQQGRLVEACG 374
           V+  ++D +   G +  A++ +  M+    +P+ +      Y+ LI+ LC   ++ EA  
Sbjct: 624 VYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFR 680

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           L+ ++  R   P L  +  LI G  +  K  +   L   +   G+
Sbjct: 681 LYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725


>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
          Length = 1295

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 227/434 (52%), Gaps = 10/434 (2%)

Query: 180  VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            VY  ++   +   + E+A   + Q    G    +  CN +LK L    QI  A SLFD +
Sbjct: 799  VYAAVIRIFVESSMFEDALLTYIQAKNIGVDRRL--CNFLLKCLVEGNQIMYARSLFDDM 856

Query: 240  LLVGPKPNVVTFSTLINAFCKEAK--LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
               GP PNV ++S L++ +    +  LE+AF+L   M    + P+   Y   + GL ++ 
Sbjct: 857  KSCGPSPNVCSYSILMSMYTHGERSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCRSR 916

Query: 298  RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            ++    + L T    G       F++V+  +   G V +A++ +  M   G++P+V SYS
Sbjct: 917  QVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYS 976

Query: 358  ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            IL+ GLC+QG L++   +  ++    + P+ ++YSSL+ G CK+G++     ++ N+   
Sbjct: 977  ILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDH 1036

Query: 418  GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            G + D +  S++++G      +      +F  +   + P+++ + +L+   CR +   D 
Sbjct: 1037 GFEHDQINYSIILHGCCQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDA 1096

Query: 473  VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDVITYSAIIH 531
            + +F LM    + P+++T T+L+   + QG +  A L   +M +  G+ P++  Y  +I+
Sbjct: 1097 LGVFELMLENGLSPNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMIN 1156

Query: 532  GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            GL K    S   ++F  M + G  PD+ +Y++++   +K   L  AL+L+ ++ D G++P
Sbjct: 1157 GLCKTNKYSGVWNVFADMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKP 1216

Query: 592  DIITYNTIICGYCS 605
            +I TY+++I G C+
Sbjct: 1217 NIFTYSSLINGLCN 1230



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 237/478 (49%), Gaps = 14/478 (2%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ +I  +V     +++  +  Y+    I +   L   L+ CLV+ N +     L   M+
Sbjct: 800  YAAVIRIFVESSMFEDA--LLTYIQAKNIGVDRRLCNFLLKCLVEGNQIMYARSLFDDMK 857

Query: 175  GKG----FCVYEFLMNGLL--RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
              G     C Y  LM+      +  +E AF +  ++   G  PN  T    L  LC + Q
Sbjct: 858  SCGPSPNVCSYSILMSMYTHGERSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQ 917

Query: 229  IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            + +A      L   G   +   F+ +I+ FC E +++KA ++++ M +   VPD+  YSI
Sbjct: 918  VTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSI 977

Query: 289  LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            L+DGL K G L +G ++L      G+  + V +SS++      G V  A++ +  + + G
Sbjct: 978  LVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHG 1037

Query: 349  FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            F  + I+YSI++ G CQ   L     L+  ++   + P +  Y+SLI   C+   L+D  
Sbjct: 1038 FEHDQINYSIILHGCCQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDAL 1097

Query: 409  SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQ-SVRMTLIPNLFIFNTLMDG 462
             +++ M++ GL P+ V C++L++     GL+G+A  F  +    + ++PNL ++  +++G
Sbjct: 1098 GVFELMLENGLSPNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMING 1157

Query: 463  CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             C+  + +    +F  M      PDV+ ++++I G      L  A+ L+ +ML  G+ P+
Sbjct: 1158 LCKTNKYSGVWNVFADMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKPN 1217

Query: 523  VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
            + TYS++I+GL     +   + + + M    +  D  +Y  ++    +  N+ AA+++
Sbjct: 1218 IFTYSSLINGLCNDDRLPEAMGLIRDMIGEDLLLDNVLYTSIIACYCRRLNMKAAMEM 1275



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 158/324 (48%), Gaps = 11/324 (3%)

Query: 289  LIDGLFKAG-RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            ++D    AG  L E   +L++ L + + L + V+++V+  +V       A+ TY +  N 
Sbjct: 768  IVDYCGNAGSELFELAPMLVSNLGQSMTL-LQVYAAVIRIFVESSMFEDALLTYIQAKNI 826

Query: 348  GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK--LR 405
            G    + ++  L+K L +  +++ A  LF  +      P++ +YS L+  +    +  L 
Sbjct: 827  GVDRRLCNF--LLKCLVEGNQIMYARSLFDDMKSCGPSPNVCSYSILMSMYTHGERSCLE 884

Query: 406  DGFSLYDNMIKRGLKPDAVVCSLLINGLMGD----ALRFFFQSVRMTLIP-NLFIFNTLM 460
            + F L   M   G++P+A      + GL       +   F Q++  +  P + + FN ++
Sbjct: 885  EAFELLCEMESNGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNYCFNAVI 944

Query: 461  DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
             G C   +    +++F  M      PDV ++++L+ G+  QG L     +  +M + G+ 
Sbjct: 945  HGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGIC 1004

Query: 521  PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
            P+ ++YS+++HGL K   +++ L +FK ++ +G   D   Y+++L+   +  +L A   L
Sbjct: 1005 PNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISDL 1064

Query: 581  FGQLTDRGLEPDIITYNTIICGYC 604
            +  +    + PD+  Y ++I   C
Sbjct: 1065 WFDMIHHNIAPDVYNYTSLIYALC 1088



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/196 (20%), Positives = 88/196 (44%), Gaps = 9/196 (4%)

Query: 423 AVVCSLLINGLMGDALRFFFQSVRMTLIPNL--FIFNTLMDGCCRLKRATDTVKLFMLMG 480
           AV+   + + +  DAL  + Q+  + +   L  F+   L++G     +      LF  M 
Sbjct: 802 AVIRIFVESSMFEDALLTYIQAKNIGVDRRLCNFLLKCLVEG----NQIMYARSLFDDMK 857

Query: 481 MYNIKPDVITHTVLIR--GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
                P+V ++++L+       +  L  A  L  +M   G+ P+  TY   ++GL + + 
Sbjct: 858 SCGPSPNVCSYSILMSMYTHGERSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQ 917

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           ++      + + ++G       +N +++    E  +D A+++F  +   G  PD+ +Y+ 
Sbjct: 918 VTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSI 977

Query: 599 IICGYCSLNSCLIDGY 614
           ++ G C     L+ GY
Sbjct: 978 LVDGLCKQGD-LLKGY 992


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 237/476 (49%), Gaps = 10/476 (2%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNG 187
           +DE++ +F  + D  +     L++ L+S     ++   + ++           Y  +++G
Sbjct: 240 LDEAIALFRELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHG 296

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
              +G +ENA  +  ++  +G   N      ++  LC  GQ+ +A  + + + + G   +
Sbjct: 297 YCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALD 356

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
            V F+T+I+ FC +  L  A +L+  M +  L  D + ++ LI+GL +AG LKE + +L 
Sbjct: 357 AVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQ 416

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             +D+GL +DVV ++ ++D Y   G++  A + ++ M+     PNV++Y+ L  GLC+QG
Sbjct: 417 EMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQG 476

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
            +  A  L  ++  + LE ++ TY+SLI+G CK G L     +   M   G + D    +
Sbjct: 477 DVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYT 536

Query: 428 LLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            LI+     G    A     + +   + P++  +N LM+G C   R     KL   M   
Sbjct: 537 TLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEK 596

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
           N++P+V+T+  L++      ++ S   ++  M  + + P+  TY+ +I G  K +N+   
Sbjct: 597 NVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEA 656

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL--EPDIITY 596
           L+  + M   G+    + Y+ L+ +L K+     A   F ++ + GL  EPD+ ++
Sbjct: 657 LYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 228/457 (49%), Gaps = 12/457 (2%)

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           +L R +R  G        N +L +  ++ A  + R++  +    N+ + N +LK L   G
Sbjct: 214 ELLRRLRQYGLSPSPESCNAVLSRLPLDEAIALFRELPDK----NVCSHNILLKALLSAG 269

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ +A   FD +      P+VVT+ T+++ +C   +LE A +L + M    L  +  +Y+
Sbjct: 270 RLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYT 326

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +I  L   G++ +   +L      G+ LD VVF++V+  +   GD+  A + ++ M   
Sbjct: 327 SVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKR 386

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G   + ++++ LI GLC+ G L EA  +  +++ + L+  ++TY+ LIDG+CK G + + 
Sbjct: 387 GLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEA 446

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDG 462
           F +++ M+ R + P+ V  + L +GL   GD   A     +     L  N++ +N+L++G
Sbjct: 447 FRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLING 506

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+       +++   M     + DV T+T LI  +   G    A  +  +ML +G+ P 
Sbjct: 507 LCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPS 566

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           + TY+ +++G      +  G  + + M    V P++  YN L+     + N+ +  +++ 
Sbjct: 567 IATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYK 626

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            +  + + P+  TYN +I G+C   +     YF  ++
Sbjct: 627 GMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEM 663



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 227/475 (47%), Gaps = 12/475 (2%)

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR 190
           S E+   +   G+  SP+    ++S L    ++     L R +  K  C +  L+  LL 
Sbjct: 212 SAELLRRLRQYGLSPSPESCNAVLSRLPLDEAIA----LFRELPDKNVCSHNILLKALLS 267

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
            G +++A    +   +    P++VT   ++   C+ G++ NA  L D +   G + N   
Sbjct: 268 AGRLKDAC---QHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATV 324

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           ++++I   C + ++  A ++   M    +  D ++++ +I G    G L     L     
Sbjct: 325 YTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQ 384

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
            RGL  D V  +++++     G++  A +    M++ G   +V++Y++LI G C++G +V
Sbjct: 385 KRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMV 444

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           EA  +  +++ RR+ P+++TY++L DG CK G +R    L   M  +GL+ +    + LI
Sbjct: 445 EAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLI 504

Query: 431 NGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           NGL     +  A+R   +        +++ + TL+D  C+         +   M    IK
Sbjct: 505 NGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIK 564

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P + T+ VL+ G    G +     L   ML++ + P+V+TY++++      KN+     +
Sbjct: 565 PSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEI 624

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +K M    VAP+   YN+L+    K  N+  AL    ++ ++GL     +Y+ +I
Sbjct: 625 YKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALI 679



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 155/321 (48%), Gaps = 4/321 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI    R G++ E+  +   M D G+ +       L+       ++ + +++   M 
Sbjct: 395 HTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMV 454

Query: 175 GK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G+        Y  L +GL ++G +  A  +  ++  +G   N+ T N ++  LC  G + 
Sbjct: 455 GRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLE 514

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +   +   G + +V T++TLI+  CK  + ++A  +   M++  + P +  Y++L+
Sbjct: 515 QAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLM 574

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G   +GR++ G +LL   L++ ++ +VV ++S+M  Y    ++    + Y  M +    
Sbjct: 575 NGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVA 634

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN  +Y+ILIKG C+   + EA     +++ + L  +  +YS+LI    K  K  +    
Sbjct: 635 PNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVF 694

Query: 411 YDNMIKRGLKPDAVVCSLLIN 431
           +D M   GL  +  V S  ++
Sbjct: 695 FDKMRNEGLTAEPDVYSFYMD 715


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 238/520 (45%), Gaps = 31/520 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+  +++  ++     I   M   G   +P L   L+    +       YKL   M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 175 G----KGFCVYEFLMNG------LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                 G+ VY   +        L    +++ A  ++ +++    V N V      + LC
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   A  L   ++  G  P+  T+S +I   C   K+EKAF L+  M  + + PD+ 
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ILID   KAG +++   L       G    VV +++++ AY+    V +A   + RM
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL----------------IRRLEPSL 388
           ++ G  PN ++Y  L+ GLC+ G + +A  ++ +++                   L P++
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +TY +L+DG CK+ K+     L D M+  G +P+ +V   LI+G      +  A   F Q
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
             +   +P++  + +L+D   +  R    +K+   M   +  P+V+T+T +I G+   G 
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A+ L   M ++G +P+V+TY+A+I GL K   I + L +F  M R G +P+   Y V
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           L+N L     LD A  L G++        +  Y   I G+
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 664



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 218/502 (43%), Gaps = 91/502 (18%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G  + AF + ++++++GFVP+  T +K++  LC   ++  A  LF  + +VG  P+V T+
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + LI++FCK   +E+A  L+  M  +   P ++ Y+ LI    KA ++ + N++    +D
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG----------------FLPNVIS 355
            G + + V + +++D     G++ +A + Y +++                     PNV++
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  L+ GLC+  ++  A  L   +L    EP+ + Y +LIDGFCK+GK+     ++  M 
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 506

Query: 416 KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           K G  P     + LI+ +  D     A++   Q ++ +  PN+  +  ++DG CR+  + 
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 471 DTVKLFMLMGMYNIKPDVITHT-----------------------------------VLI 495
             +KL  LM      P+V+T+T                                   VLI
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 496 RGIASQGSLSSAILLFFQMLKR---------------------------------GLTPD 522
             + + G L  A LL  +M +                                  G  P 
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPI 686

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMER--NGVAPDIAIYNVLLNMLIKECNLDAALKL 580
              Y  +I    K   + + + + K M    + V  D  +Y  L+  L     ++ A +L
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746

Query: 581 FGQLTDRGLEPDIITYNTIICG 602
           + ++T RG  P++  +  +I G
Sbjct: 747 YSEMTRRGFVPELSVFVCLIKG 768



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/542 (23%), Positives = 231/542 (42%), Gaps = 43/542 (7%)

Query: 105 RDSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
            D L DFG       Y+ L++     G++D    +   MS+ G  +    V      L  
Sbjct: 28  EDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCK 87

Query: 160 SNSVGQYYKLCRAMRGKGF------CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
               G++      +  + F      C +  +++GL+     + A     ++     +PN+
Sbjct: 88  E---GRWADALDMIEREDFKLDTVLCTH--MISGLMEASYFDEAMSFLHRMRCNSCIPNV 142

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           VT   +L       Q+G    + ++++  G  PN   F++L++++C E     A++L N 
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 202

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA------LDRGLKLDVVVFSSVMDA 327
           M      P  ++Y+I I  +    +L   + L L        L     L+ V  ++    
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
             G+G   +A Q    M+  GF+P+  +YS +I  LC   ++ +A  LF ++ +  + P 
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFF 442
           + TY+ LID FCK+G +     L++ M   G  P  V  + LI+  +       A   F 
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM-LMGM---------------YNIKP 486
           + V     PN   +  L+DG C+    +   +++  L+G                + + P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +V+T+  L+ G+     +  A  L   ML  G  P+ I Y A+I G  K   I     +F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             M + G  P +  Y  L++ + K+  LD A+K+  Q+      P+++TY  +I G C +
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 607 NS 608
             
Sbjct: 563 GE 564



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 230/528 (43%), Gaps = 68/528 (12%)

Query: 119 IENYVR----IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           + N+ R    +GK D++ ++   M   G         ++++ L  +  V + + L + M+
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++   + G+IE A  +  ++   G  P +VT   ++       Q+ 
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 375

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM--------------- 275
            A+ +F  ++  G +PN VT+  L++  CK   + KAF++Y  ++               
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 276 -EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
               L P+++ Y  L+DGL KA ++   +ELL   L  G + + +V+ +++D +   G +
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495

Query: 335 GRA---------------VQTY----DRMLNGGFL----------------PNVISYSIL 359
             A               V TY    DRM   G L                PNV++Y+ +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+ G   +A  L   +  +   P+++TY++LIDG  K+GK+     L+  M ++G 
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615

Query: 420 KPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPN-LFIFNTLMDGCCRLKRATDTVK 474
            P+ V   +LIN L      D  R     ++ T  P  L  +   + G    K    ++ 
Sbjct: 616 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG--FSKSFIASLG 673

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK--RGLTPDVITYSAIIHG 532
           +   M  Y   P    + +LI   +  G L  A+ L  +M++    +  D   Y+++I  
Sbjct: 674 ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQA 733

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           L     +     ++  M R G  P+++++  L+  L++    D AL+L
Sbjct: 734 LCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 95/405 (23%), Positives = 162/405 (40%), Gaps = 42/405 (10%)

Query: 33  NQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDK 89
           ++A  + A LI T++   +  +F        +PN+     L+  L ++   D A  + D 
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 469

Query: 90  MVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
           M+                    GC+     Y  LI+ + + GKID + E+F  M+  G  
Sbjct: 470 MLSS------------------GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 511

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFH 199
            S      L+  +     +    K+   M  K  C      Y  +++GL R G  E A  
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQML-KDSCTPNVVTYTAMIDGLCRIGESEKALK 570

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +   + ++G  PN+VT   ++  L   G+I  +  LF  +   G  PN VT+  LIN  C
Sbjct: 571 LLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLC 630

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
               L+KA  L   M +      L  Y   I G  K+     G  +L      G      
Sbjct: 631 AAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG--ILEEMESYGTVPIAP 688

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS-----YSILIKGLCQQGRLVEACG 374
           V+  ++D +   G +  A++ +  M+    +P+ +      Y+ LI+ LC   ++ EA  
Sbjct: 689 VYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFR 745

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           L+ ++  R   P L  +  LI G  +  K  +   L   +   G+
Sbjct: 746 LYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790


>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 376

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 192/358 (53%), Gaps = 18/358 (5%)

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C+   ++ A ++Y  M E  + PD ++Y+ +++G F+AGR+K+  EL    + R    +V
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXSQNV 59

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG------RLVEA 372
           V F+ +M    G GDV +A+  ++ M   GF+ +  +Y IL+ G C+ G      R++E 
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEI 119

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
               G VL          YS++I+G CK  KL +  S+ + MIK G  P+A V + LING
Sbjct: 120 AEEKGGVL------DAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLING 173

Query: 433 LMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
            MG     DA+R F +       P +  +NTL++G C+ +R  +   L   M     KP 
Sbjct: 174 FMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPC 233

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           VIT+++L++G+     +  A+ L+ Q++  GL PDV   + +IHGL       + L ++ 
Sbjct: 234 VITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYF 293

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            M R   AP++  +N L+    K+ ++  AL ++ ++   GL+PDI++YN  + G CS
Sbjct: 294 DMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCS 351



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 191/365 (52%), Gaps = 6/365 (1%)

Query: 166 YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
           Y ++  +       VY  ++NG  R G I++   +  +++ R    N+V+ N +++ L  
Sbjct: 13  YKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXSQNVVSFNIMMRGLFG 71

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           NG +  A S+++++   G   +  T+  L++ FCK   + K+ ++  +  E   V D   
Sbjct: 72  NGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFA 131

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           YS +I+GL K  +L E   +L   +  G   +  V++++++ ++G+     A++ +  M 
Sbjct: 132 YSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMG 191

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           +    P V++Y+ LI GLC+  R  EA  L  ++L +  +P ++TYS L+ G C+  K+ 
Sbjct: 192 STNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVE 251

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLM 460
               L++ +I  GLKPD  + ++LI+GL  +G    AL  +F   R    PNL   NTLM
Sbjct: 252 MALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLM 311

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +G  +     + + ++  +    ++PD++++ + ++G+ S   +S AIL     L + + 
Sbjct: 312 EGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIA 371

Query: 521 PDVIT 525
           P +IT
Sbjct: 372 PSIIT 376



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 165/325 (50%), Gaps = 9/325 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  + R G+I + +E++  M   G   S ++V    +M  L  +  V +   +   
Sbjct: 28  YNAMLNGFFRAGRIKDCIELWELM---GREXSQNVVSFNIMMRGLFGNGDVDKAISIWEL 84

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   GF      Y  L++G  + G I  +  +     ++G V +    + ++  LC   +
Sbjct: 85  MTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAYSAMINGLCKEAK 144

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A S+ + ++  G  PN   ++TLIN F   +K + A +++  M   +  P ++ Y+ 
Sbjct: 145 LDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNT 204

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+GL K  R  E  +L+   L++G K  V+ +S +M        V  A+Q ++++++ G
Sbjct: 205 LINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNG 264

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V   +ILI GLC  G+   A  L+  +      P+L+T+++L++GF K G +R+  
Sbjct: 265 LKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL 433
            ++  +++ GL+PD V  ++ + GL
Sbjct: 325 GIWARILRNGLQPDIVSYNITLKGL 349



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 136/280 (48%), Gaps = 6/280 (2%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           GD+  A + Y  M      P+ + Y+ ++ G  + GR+ +   L+ +++ R    +++++
Sbjct: 4   GDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXSQNVVSF 62

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVR 446
           + ++ G   +G +    S+++ M + G   D+    +L+     NG +  +LR    +  
Sbjct: 63  NIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEE 122

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              + + F ++ +++G C+  +  + V +   M      P+   +  LI G         
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDD 182

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           AI +F +M     +P V+TY+ +I+GL KG+  +    + K M   G  P +  Y++L+ 
Sbjct: 183 AIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMK 242

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            L +   ++ AL+L+ Q+   GL+PD+   N +I G CS+
Sbjct: 243 GLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSV 282



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 140/304 (46%), Gaps = 4/304 (1%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----Y 181
           G +D+++ I+  M+  G          L+     +  + +  ++      KG  +    Y
Sbjct: 73  GDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAY 132

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             ++NGL ++  ++ A  +   +I+ G  PN    N ++       +  +A  +F  +  
Sbjct: 133 SAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGS 192

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
               P VVT++TLIN  CK  +  +A+ L   M+E    P +I YS+L+ GL +  +++ 
Sbjct: 193 TNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEM 252

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             +L    +  GLK DV + + ++     +G    A+  Y  M      PN+++++ L++
Sbjct: 253 ALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLME 312

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G  + G +  A G++ ++L   L+P +++Y+  + G C   ++        + + + + P
Sbjct: 313 GFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAP 372

Query: 422 DAVV 425
             + 
Sbjct: 373 SIIT 376



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 127/281 (45%), Gaps = 41/281 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    +  K+DE+V +   M   G   +  +   L++  +  +      ++ R M 
Sbjct: 132 YSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREM- 190

Query: 175 GKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           G   C      Y  L+NGL +      A+ + ++++++G+ P ++T + ++K LC   ++
Sbjct: 191 GSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKV 250

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  L++ ++  G KP+V   + LI+  C   K + A  LY  M   +  P+L+ ++ L
Sbjct: 251 EMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTL 310

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++G +K G                                   D+  A+  + R+L  G 
Sbjct: 311 MEGFYKDG-----------------------------------DIRNALGIWARILRNGL 335

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            P+++SY+I +KGLC   R+  A       L +++ PS++T
Sbjct: 336 QPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPSIIT 376


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 252/534 (47%), Gaps = 34/534 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  + + G++D++ E+   M + G+ +   L   L+  L     + +  +  ++M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 175 GK---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQR-----GFVPNIVTCNKILKRLCIN 226
            +       Y  ++NGL +   I+    +   + +R     G  P++++ + ++  LC  
Sbjct: 62  EECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKA 121

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            ++  A   F  +  VG  PNVVT+S+LI+  CK  ++++A+ L   +   D+VP  + Y
Sbjct: 122 QRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYY 181

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + +++G  + G+  E  ELLL   ++G  ++++ F++++ A     +  +A Q ++R+L 
Sbjct: 182 NAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 241

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PNV++Y++ + GLC+ G++ EA  +  +++  ++ P ++TYSS+IDGFCK+G++  
Sbjct: 242 SGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK 301

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMD 461
              ++  M+     P  V    L++G        +A R     V    IP L  +N LMD
Sbjct: 302 ADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMD 361

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C        ++++  M     +PD  T+  LI+ +     +  A      M    + P
Sbjct: 362 CVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 421

Query: 522 DVITYSAIIHGLFKGKNI-------------------SVGLHMFKLMERNGVAPDIAIYN 562
           +     A++  L K   +                      + + + M   GV PD A Y 
Sbjct: 422 NGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYV 481

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
            +L  L     +D+A+  F ++  RG  P ++TY  +I   CS +  + D  F+
Sbjct: 482 AVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSAD--MADDAFR 533



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 164/295 (55%), Gaps = 11/295 (3%)

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           ++++V++ +   G V +A +  D M   G   +V+ +S LI+GLC++GR+ EA   F + 
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF-KS 59

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR-----GLKPDAVVCSLLINGL- 433
           +     P+++TY+++++G CK+ ++ +G  L+D+M KR     G +PD +  S +I+ L 
Sbjct: 60  MGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               +  A  +F +   +   PN+  +++L+DG C++ R  +   L M +   ++ P  +
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
            +  ++ G   QG  S  + L   M ++G   ++I ++A++H L+K          F+ +
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            ++G  P++  YNV ++ L K   +D A ++  ++ +  + PD+ITY++II G+C
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/373 (21%), Positives = 161/373 (43%), Gaps = 63/373 (16%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           ++H L ++D ++ A   F+++ ++ GK  N               Y+  +    + GK+D
Sbjct: 219 MLHALWKNDEQEKACQFFERL-LKSGKKPNVVT------------YNVAVHGLCKAGKVD 265

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR-GKGFCVYEFLM--- 185
           E+  I   M +  +  +PD++    S ++D          C+A R  K   V+  +M   
Sbjct: 266 EAYRILLEMVESKV--TPDVI--TYSSIIDG--------FCKAGRMDKADDVFTRMMVHE 313

Query: 186 ------------NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                       +G         AF +H  ++  GF+P + T N ++  +C    + +A 
Sbjct: 314 CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 373

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            ++  +     +P+  T++ LI   C+  ++++A +  ++M   ++VP+  I   L++ L
Sbjct: 374 EIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVL 433

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI---GDVGRAVQTYDRMLNGGFL 350
            K G + E                     SV+D  V I   G+   AV+  ++M+  G  
Sbjct: 434 CKQGEVDEA-------------------CSVLDNVVEICKAGEPDEAVEVIEQMVLKGVR 474

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +Y  +++ LC   R+  A   F ++  R   P L+TY+ LI   C +    D F +
Sbjct: 475 PDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRI 534

Query: 411 YDNMIKRGLKPDA 423
           ++ M+  G  P A
Sbjct: 535 FEAMVAAGFTPQA 547


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 251/545 (46%), Gaps = 50/545 (9%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  + R  L      Y+ LI+ Y R G IDE++ +   M   G+  S      +++    
Sbjct: 352 FNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLN---- 407

Query: 160 SNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
             SV + + +   M   G       Y  L+ GL + G +  A      ++      +  T
Sbjct: 408 -GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKT 466

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N +L  +C +G +  A  L + ++ +   P++ T++ L++ FC++ K+  A  L  +M+
Sbjct: 467 LNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMML 526

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDV 334
           E  LVPD++ Y+ L+ GL K G++K  + L    +   G+  D + ++S+M+ Y+  G +
Sbjct: 527 EKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKL 586

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
            +   T   M      PN  SY+IL+ G  ++G L  +  L+  ++ + ++P+ +TY  L
Sbjct: 587 HKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLL 646

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           I G  K G +       D M+  G+ PD +   +LIN       M DAL+ F     + +
Sbjct: 647 ILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYM 706

Query: 450 IPNLFIFNTLMDGC-----------------------------------CRLKRATDTVK 474
            P+   ++ +++G                                    CR        +
Sbjct: 707 SPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFR 766

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M    I P  +  + ++RG++  G +   I++F  +++ G+ P + T++ ++HGL 
Sbjct: 767 LKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLC 826

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   IS  LH+  LME  G+  D+  YNVL+  L K   +  AL+L+ ++  +GL P++ 
Sbjct: 827 KEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVT 886

Query: 595 TYNTI 599
           TY T+
Sbjct: 887 TYTTL 891



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/515 (24%), Positives = 241/515 (46%), Gaps = 23/515 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++  YV+ G+   ++ +   M   G+         ++  L         Y L + MR
Sbjct: 262 YNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMR 321

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G       C Y  L+ G   +  +  A H+  +++++G  P++ T   ++   C NG I 
Sbjct: 322 GDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTID 381

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +   + + G KP+ VT+S ++N    EA     F +Y+ M +    PD+  Y  L+
Sbjct: 382 EALRVLYEMQVAGVKPSEVTYSAMLNGSVHEA-----FSVYDNMEKYGCSPDVYTYRNLL 436

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K G L +  E +   +     +D    ++++      G +  A+   ++M+   F+
Sbjct: 437 RGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFI 496

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++ +Y+IL+ G C++G++V A  L   +L + L P ++TY+ L+ G  K G+++    L
Sbjct: 497 PDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYL 556

Query: 411 YDNMI-KRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI--------PNLFIFNTLMD 461
           +  +I K G+  D +  + ++NG +          V MT+         PN   +N LM 
Sbjct: 557 FQEIICKEGMYADCIAYNSMMNGYLKAGK---LHKVEMTIYDMNQNKVYPNPASYNILMH 613

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G  +    + ++ L+  M    IKP  +T+ +LI G++  G +  A+    +M+  G+ P
Sbjct: 614 GHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYP 673

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D +++  +I+   +   +S  L +F  M+   ++P    Y+ ++N LI++  L  +  + 
Sbjct: 674 DRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVL 733

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
             + + GLEP    Y  +I   C      I+G F+
Sbjct: 734 RDMVESGLEPKHTHYIALINAKCRFGD--INGAFR 766



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 207/428 (48%), Gaps = 8/428 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ L+N  +++  + +A      +   GF  +   CN +L  L    +IG +  ++  L
Sbjct: 157 VFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALV---EIGESKHVWFFL 213

Query: 240 L--LVGPKP-NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
              LV   P +V T + ++N+ C E  L+ A  + + M    L P++I Y+ ++    K 
Sbjct: 214 KEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKK 272

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GR K    +L      G++ DV  ++ ++D    +     A     RM      P+  +Y
Sbjct: 273 GRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTY 332

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LIKG   + +++ A  +F ++L + L+PSL TY++LIDG+C++G + +   +   M  
Sbjct: 333 NTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQV 392

Query: 417 RGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
            G+KP  V  S ++NG + +A   +    +    P+++ +  L+ G C+        +  
Sbjct: 393 AGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFM 452

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             +       D  T   L+ GI + GSL  A+ L  +M+     PD+ TY+ ++ G  + 
Sbjct: 453 SCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRK 512

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ-LTDRGLEPDIIT 595
             I   + + ++M   G+ PDI  Y  LL  LIKE  + AA  LF + +   G+  D I 
Sbjct: 513 GKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIA 572

Query: 596 YNTIICGY 603
           YN+++ GY
Sbjct: 573 YNSMMNGY 580



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 229/512 (44%), Gaps = 51/512 (9%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G  +  F ++ D++  +GC      Y  L+    + G + ++ E  + +  +   +    
Sbjct: 408 GSVHEAFSVY-DNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKT 466

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVI 205
           +  L+  + +  S+ +   LC  M    F      Y  L++G  RKG I  A  + + ++
Sbjct: 467 LNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMML 526

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLF-DVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           ++G VP+IVT   +LK L   GQ+  AS LF +++   G   + + +++++N + K  KL
Sbjct: 527 EKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKL 586

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
            K       M +  + P+   Y+IL+ G  K G L     L    + +G+K   V +  +
Sbjct: 587 HKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLL 646

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +      G +  AV+  D+M+  G  P+ +S+ +LI    ++ R+ +A  LF  +    +
Sbjct: 647 ILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYM 706

Query: 385 EPSLLTYSSLIDGF-----------------------------------CKSGKLRDGFS 409
            PS  TYS++I+G                                    C+ G +   F 
Sbjct: 707 SPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFR 766

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L + M   G+ P  V  S ++ GL     + + +  F   +R  ++P +  F TLM G C
Sbjct: 767 LKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLC 826

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  + +D + L  LM    +K DV+T+ VLI G+     +S A+ L+ +M  +GL P+V 
Sbjct: 827 KEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVT 886

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           TY+ +   ++       G  +   +E  G+ P
Sbjct: 887 TYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVP 918



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 147/321 (45%), Gaps = 36/321 (11%)

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           +++ +L++   K  R+ + +  +L   + G K      ++V++A V IG+          
Sbjct: 156 LVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKE 215

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
            L   F  +V + +I++  +C +G L  A  +  ++    L P+++TY++++  + K G+
Sbjct: 216 GLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKKGR 274

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +    + ++M K G++ D                              ++ +N ++D  
Sbjct: 275 FKAAMCVLEDMEKNGVEAD------------------------------VYTYNIMIDKL 304

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C++KR+T    L   M   N+ PD  T+  LI+G   +  +  AI +F +ML++GL P +
Sbjct: 305 CKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSL 364

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ +I G  +   I   L +   M+  GV P    Y+ +LN  + E     A  ++  
Sbjct: 365 ATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGSVHE-----AFSVYDN 419

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           +   G  PD+ TY  ++ G C
Sbjct: 420 MEKYGCSPDVYTYRNLLRGLC 440



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 8/296 (2%)

Query: 98  YNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMS 155
           Y +  + R  +      Y  LI    + G I+ +V+    M   GIY  PD +    L++
Sbjct: 626 YLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIY--PDRLSFDVLIN 683

Query: 156 CLVDSNSVGQYYKLCRAMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
              + + +    +L   M+          Y  ++NGL+RK  ++++  + R +++ G  P
Sbjct: 684 AFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEP 743

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
                  ++   C  G I  A  L + +  +G  P  V  S+++    K  K+E+   ++
Sbjct: 744 KHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVF 803

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             ++   +VP +  ++ L+ GL K  ++ +   L       GLK+DVV ++ ++     I
Sbjct: 804 CSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKI 863

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
             V  A++ Y+ M + G  PNV +Y+ L + +   GR +E   L   +  R L PS
Sbjct: 864 QCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPS 919



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 12/232 (5%)

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDA- 437
           I R + + L +  L++ + K  ++ D       M   G K  A  C+ ++N L  +G++ 
Sbjct: 148 ISRCDSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESK 207

Query: 438 -LRFFFQSVRMTLIP-NLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVITHT 492
            + FF +   +   P ++   N +++  C    LK A   +       +    P+VIT+ 
Sbjct: 208 HVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL----PNVITYN 263

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            ++     +G   +A+ +   M K G+  DV TY+ +I  L K K  +    + K M  +
Sbjct: 264 TILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGD 323

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +APD   YN L+     E  +  A+ +F ++  +GL+P + TY T+I GYC
Sbjct: 324 NLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYC 375



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 1/155 (0%)

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N  +F+ L++   + KR  D     + M     K        ++  +   G         
Sbjct: 154 NPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFL 213

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            + L R    DV T + +++ +    N+    HM   M+   + P++  YN +L+  +K+
Sbjct: 214 KEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKK 272

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
               AA+ +   +   G+E D+ TYN +I   C +
Sbjct: 273 GRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKM 307


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 255/534 (47%), Gaps = 18/534 (3%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           R+  + +      Y+ L+    +  ++ E+VE+   M ++G+       + L+       
Sbjct: 223 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 282

Query: 162 SVGQYYKLCRAMRGKGFCVYE----FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            +    ++   M   GF   E    F+++ L +K ++E AF +  ++   G VPN+   N
Sbjct: 283 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++ +LC N +  +A  LF  +   G +PN VT++ LI+A CK   +E A  L++ M + 
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            +   +  Y+ LI+G  K G L     LL   +  GL      +S ++      GD+   
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 462

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++ +  M   G   N  +++ LI G C+  ++ EA  LF +++   + P+ +T++ +I+G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
           +C  G +R  F LYD M++ GLKPD      LI+GL     +  A  F         + N
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLN 582

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
            F    L+ G  R  R T+T  L+  M +  +K D+++ T+++     Q     + +LF 
Sbjct: 583 NFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 642

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M ++G+ PD I Y+ +I  L K +N+   L+ +  M  +G +P+   + VL+N L K  
Sbjct: 643 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSG 702

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCS---------LNSCLIDGYFKS 617
            L +A  L  ++    + P+  TYN  +  + +         L+S ++ G+  S
Sbjct: 703 YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS 756



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 248/521 (47%), Gaps = 28/521 (5%)

Query: 102 RLFRDSLG----DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           RLF++  G         Y+ LI    + G I++++ +F  M D GI ++      L++  
Sbjct: 359 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418

Query: 158 VDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
               S+ +   L   M  +G       Y  L+ GL R G + +   +HR++ +RG   N 
Sbjct: 419 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 478

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T   ++   C + ++  A+ LFD ++     PN VTF+ +I  +C    + KAFQLY+ 
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M+EM L PD   Y  LI GL     + + NE +    +    L+    ++++  +   G 
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 598

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
                  +D M   G   +++S++I++    +Q    ++C LF ++  + ++P  + Y+ 
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMT 448
           +ID   K   +    + +D M+  G  P+ V  ++LIN     G +G A     + +   
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 449 LIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           ++PN F +N  +D       +++A D +   ML G       +++  +LI+G+   G + 
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHL---ASIVSFNILIKGLCKAGKIQ 774

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            AI L  ++ + G +PD I+YS IIH L K  +I+    ++  M   G+ PD+  YN+  
Sbjct: 775 EAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI-- 832

Query: 566 NMLIKECNL----DAALKLFGQLTDRGLEPDIITYNTIICG 602
              I+ CN+    D AL ++  +   G++P+  TY  ++ G
Sbjct: 833 --FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 216/467 (46%), Gaps = 41/467 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++ L +    ++A  + +++  RG  PN VT   ++  LC  G I +A  LFD +
Sbjct: 340 AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKM 399

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G K  V  +++LIN +CK+  L++A  L + M++  L P    YS LI GL + G L
Sbjct: 400 RDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDL 459

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               EL     +RG+  +   F+++++ +     +  A + +D+M++   +PN ++++++
Sbjct: 460 SSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVM 519

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC-------------------- 399
           I+G C  G + +A  L+ Q++   L+P   TY SLI G C                    
Sbjct: 520 IEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYA 579

Query: 400 ---------------KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR----- 439
                          + G+  + + L+D M  RG+K D V  ++++   +    +     
Sbjct: 580 VLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F +     + P+   +  ++D   + +     +  +  M +    P+ +THTVLI  + 
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 699

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G L SA LL  +ML   + P+  TY+  +       ++     +   M +  +A  I 
Sbjct: 700 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIV 758

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +N+L+  L K   +  A+ L  ++T+ G  PD I+Y+TII   C +
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKM 805



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 201/405 (49%), Gaps = 5/405 (1%)

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           +  G   N  T ++IL  L    Q   A  LFD +L  G   +   ++  I A+C+   L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           + A  L   M    +    + Y++L+ GL K  R++E  E+    ++ G+  D V + ++
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +  +  + ++  A++    M+  GF+P+  + S +I  L ++  + EA  L  ++    +
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALR 439
            P++  Y++LID  CK+ +  D   L+  M  RGL+P+ V  ++LI+     G++ DAL 
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F +     +   ++ +N+L++G C+         L   M    + P   +++ LI G+ 
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G LSS + L  +M +RG+  +  T++A+I+G  K K +     +F  M  + V P+  
Sbjct: 455 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 514

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +NV++       N+  A +L+ Q+ + GL+PD  TY ++I G C
Sbjct: 515 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 189/408 (46%), Gaps = 35/408 (8%)

Query: 70  LIHVLLQSDMRDVASHVFDKM----VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRI 125
           LI+   +    D A+ +FDKM    VI    T+N                  +IE Y  +
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV-----------------MIEGYCLV 526

Query: 126 GKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
           G I ++ +++  M +MG  L PD    + L+S L  ++ V +  +    +      +  F
Sbjct: 527 GNIRKAFQLYDQMVEMG--LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 584

Query: 184 ----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
               L+ G  R+G     +H+  ++  RG   ++V+   I+           +  LF  +
Sbjct: 585 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KP+ + ++ +I+A  KE  + +A   ++ M+     P+ + +++LI+ L K+G L
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYL 704

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L    L   +  +   ++  +D +   GD+ +A   +  ML G  L +++S++IL
Sbjct: 705 GSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG-HLASIVSFNIL 763

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKGLC+ G++ EA  L  ++      P  ++YS++I   CK G +   F L++ M+ +GL
Sbjct: 764 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           KPD V  ++ I     +G    AL  +   +R  + PN   +  L+ G
Sbjct: 824 KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 49/99 (49%)

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF +ML+ G+  D   Y+A I    + +N+     +   ME  GV      YNVL+  L 
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLC 244

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           K   +  A+++   + + G+  D +TY T++ G+C +  
Sbjct: 245 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 220/425 (51%), Gaps = 10/425 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFV---PNIVTCNKILKRLCINGQIGNASSLFD 237
           +  ++N ++++G+   A   +  VI    V   PN++T N ++K +C  G + +A  +F 
Sbjct: 134 FNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFR 193

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            + +   +P+V T+ TL++  CK  ++++A  L + M      P  + +++LI+GL K G
Sbjct: 194 DMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKG 253

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            L    +L+     +G   + V +++++      G + +A+   DRM++   +PNV++Y 
Sbjct: 254 DLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYG 313

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I GL +QGR ++   +   +  R    +   YS+LI G  K GK ++   L+  M  +
Sbjct: 314 TIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVK 373

Query: 418 GLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
             + + +V S +I+GL  D     AL    +       PN + +++LM G          
Sbjct: 374 ECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKA 433

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           ++++  M  +N   + + ++VLI G+   G +  A++++ QML +G  PDV+ Y ++I+G
Sbjct: 434 IEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMING 493

Query: 533 LFKGKNISVGLHMFKLM--ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           L     +   L ++  M  +     PD+  YN+LLN L K+ ++  A+ L   + DRG +
Sbjct: 494 LSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCD 553

Query: 591 PDIIT 595
           PD++T
Sbjct: 554 PDLVT 558



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 188/370 (50%), Gaps = 7/370 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNV+TF+ +I   CK   ++ A Q++  M      PD+  Y  L+DGL KA R+ E   L
Sbjct: 167 PNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSL 226

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L      G     V F+ +++     GD+ R  +  D M   G  PN ++Y+ LI GLC 
Sbjct: 227 LDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCL 286

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G+L +A  L  +++  +  P+++TY ++I+G  K G+  DG  +   M +RG   +  V
Sbjct: 287 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYV 346

Query: 426 CSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            S LI+GL  +     A++ F +        N  +++ ++DG CR  +  + +++   M 
Sbjct: 347 YSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMT 406

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
               KP+  T++ L++G    G+   AI ++  M K   T + + YS +IHGL K   + 
Sbjct: 407 NNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 466

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL--TDRGLEPDIITYNT 598
             + ++  M   G  PD+  Y  ++N L     ++ AL+L+ ++   +   +PD++TYN 
Sbjct: 467 EAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNI 526

Query: 599 IICGYCSLNS 608
           ++   C  +S
Sbjct: 527 LLNALCKQSS 536



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 210/452 (46%), Gaps = 49/452 (10%)

Query: 90  MVIQFGKTYNFFRLFRDSLGDFGCD-------YSFLIENYVRIGKIDESVEIFAYMSDMG 142
           ++IQ G  Y     +   +G  G +       ++ +I+   ++G +D++V++F    DM 
Sbjct: 140 VIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMF---RDMP 196

Query: 143 IY-LSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIE 195
           +    PD+     LM  L  ++ + +   L   M+  G       +  L+NGL +KG + 
Sbjct: 197 VSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLA 256

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
               +   +  +G  PN VT N ++  LC+ G++  A SL D ++     PNVVT+ T+I
Sbjct: 257 RVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTII 316

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N   K+ +     ++  LM E     +  +YS LI GLFK G+ +E  +L      +  +
Sbjct: 317 NGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECE 376

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           L+ +V+S+V+D     G    A++    M N    PN  +YS L+KG  + G   +A  +
Sbjct: 377 LNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEM 436

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
           +  +       + + YS LI G CK GK+++   ++  M+ +G KPD V    +INGL  
Sbjct: 437 WKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSN 496

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF--MLMGMYNIKPDVITHTV 493
             L                                D ++L+  ML    + +PDV+T+ +
Sbjct: 497 AGL------------------------------VEDALQLYNEMLCQEPDSQPDVVTYNI 526

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           L+  +  Q S+S AI L   ML RG  PD++T
Sbjct: 527 LLNALCKQSSISRAIDLLNSMLDRGCDPDLVT 558



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 163/360 (45%), Gaps = 41/360 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L++   +  +IDE+V +   M   G + SP     L++ L     + +  KL   M 
Sbjct: 207 YCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMF 266

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++GL  KG +E A  +  +++    VPN+VT   I+  L   G+  
Sbjct: 267 LKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRAL 326

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           + + +  ++   G   N   +S LI+   KE K ++A QL+  M   +   + I+YS +I
Sbjct: 327 DGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVI 386

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL + G+  E  E+L    +   K +   +SS+M  +   G+  +A++ +  M    F 
Sbjct: 387 DGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFT 446

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            N + YS+LI GLC+ G++ EA  ++ Q+L +  +P ++ Y S+I+G   +G + D   L
Sbjct: 447 QNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQL 506

Query: 411 YD-------------------------------------NMIKRGLKPDAVVCSLLINGL 433
           Y+                                     +M+ RG  PD V C + +  L
Sbjct: 507 YNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL 566



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 151/297 (50%), Gaps = 8/297 (2%)

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG---GFLPNVISYSILIKGLCQQGRLVE 371
           K  V  F+SV++  +  G   RA++ Y+ ++        PNV++++++IK +C+ G + +
Sbjct: 128 KRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDD 187

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  +F  + + + +P + TY +L+DG CK+ ++ +  SL D M   G  P  V  ++LIN
Sbjct: 188 AVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLIN 247

Query: 432 GL--MGDALRFFFQSVRMTL---IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           GL   GD  R       M L    PN   +NTL+ G C   +    + L   M      P
Sbjct: 248 GLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP 307

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +V+T+  +I G+  QG       +   M +RG   +   YSA+I GLFK       + +F
Sbjct: 308 NVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLF 367

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           K M       +  +Y+ +++ L ++   D AL++  ++T+   +P+  TY++++ G+
Sbjct: 368 KEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGF 424



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 142/334 (42%), Gaps = 44/334 (13%)

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRM------------------LNGGFLPN---- 352
           KL    F S++D Y  +GD     +  DRM                       LP     
Sbjct: 57  KLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVG 116

Query: 353 --------------VISYSILIKGLCQQGRLVEACGLFGQVLIRR---LEPSLLTYSSLI 395
                         V S++ ++  + Q+G    A   +  V+  +   + P++LT++ +I
Sbjct: 117 LFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVI 176

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI 450
              CK G + D   ++ +M     +PD      L++GL     + +A+    +       
Sbjct: 177 KTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCF 236

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P+   FN L++G C+        KL   M +    P+ +T+  LI G+  +G L  AI L
Sbjct: 237 PSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISL 296

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
             +M+     P+V+TY  II+GL K      G  +  LME  G   +  +Y+ L++ L K
Sbjct: 297 LDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFK 356

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           E     A++LF ++T +  E + I Y+ +I G C
Sbjct: 357 EGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLC 390


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 254/535 (47%), Gaps = 18/535 (3%)

Query: 86  VFDKMVIQFGKTYNFFRLFR--DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYM 138
           ++++++++ G++ +F  + +  + +    C+     +  LIE+Y +    DE + +  +M
Sbjct: 85  LYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWM 144

Query: 139 SD-MGIYLSPDLVQRLMSCLVDSNSVG----QYYKLCRAMRGKGFCVYEFLMNGLLRKGV 193
            D  G+        R+++ LVD NS+      + K+           +  L+  L R   
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +  A  M   +   G VP+  T   +++     G +  A  + + ++  G   + V+ + 
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           +++ FCKE ++E A      M   D   PD   ++ L++GL KAG +K   E++   L  
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G   DV  ++SV+     +G+V  AV+  D+M+     PN ++Y+ LI  LC++ ++ EA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN- 431
             L   +  + + P + T++SLI G C +   R    L++ M  +G +PD    ++LI+ 
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444

Query: 432 ----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
               G + +AL    Q        ++  +NTL+DG C+  +  +  ++F  M ++ +  +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            +T+  LI G+     +  A  L  QM+  G  PD  TY++++    +G +I     + +
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            M  NG  PDI  Y  L++ L K   ++ A KL   +  +G+      YN +I G
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 212/424 (50%), Gaps = 32/424 (7%)

Query: 184 LMNGLLRKGVIENAFHMHRQVI-QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
           +++G  ++G +E+A +  +++  Q GF P+  T N ++  LC  G + +A  + DV+L  
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P+V T++++I+  CK  ++++A ++ + M+  D  P+ + Y+ LI  L K  +++E 
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            EL      +G+  DV  F+S++       +   A++ ++ M + G  P+  +Y++LI  
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC +G+L EA  +  Q+ +     S++TY++LIDGFCK+ K R+   ++D M   G+  +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504

Query: 423 AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +V                               +NTL+DG C+ +R  D  +L   M M 
Sbjct: 505 SVT------------------------------YNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
             KPD  T+  L+      G +  A  +   M   G  PD++TY  +I GL K   + V 
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG-LEPDIITYNTIIC 601
             + + ++  G+      YN ++  L ++     A+ LF ++ ++    PD ++Y  +  
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654

Query: 602 GYCS 605
           G C+
Sbjct: 655 GLCN 658



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 236/503 (46%), Gaps = 83/503 (16%)

Query: 105 RDSLGDFGCDYS-----FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           R+ + +FGC +S      ++  + + G++++++     MS+   +  PD           
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-PD----------- 294

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
                QY              +  L+NGL + G +++A  +   ++Q G+ P++ T N +
Sbjct: 295 -----QY-------------TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  LC  G++  A  + D ++     PN VT++TLI+  CKE ++E+A +L  ++    +
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +PD+  ++ LI GL      +   EL      +G + D   ++ ++D+    G +  A+ 
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
              +M   G   +VI+Y+ LI G C+  +  EA  +F ++ +  +  + +TY++LIDG C
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           KS ++ D   L D MI  G KPD                               + +N+L
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDK------------------------------YTYNSL 546

Query: 460 MDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG--SLSSAILLFFQM 514
           +   CR   +K+A D V+     G    +PD++T+  LI G+   G   ++S +L   QM
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNG---CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK-LMERNGVAPDIAIYNVLLNMLIKECN 573
               LTP    Y+ +I GLF+ +  +  +++F+ ++E+N   PD   Y ++   L   CN
Sbjct: 604 KGINLTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL---CN 658

Query: 574 ----LDAALKLFGQLTDRGLEPD 592
               +  A+    +L ++G  P+
Sbjct: 659 GGGPIREAVDFLVELLEKGFVPE 681



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 182/368 (49%), Gaps = 6/368 (1%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G KP+   ++ ++N       L+     +  M    + PD+  +++LI  L +A +L+  
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             +L      GL  D   F++VM  Y+  GD+  A++  ++M+  G   + +S ++++ G
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268

Query: 363 LCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
            C++GR+ +A     ++  +    P   T+++L++G CK+G ++    + D M++ G  P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D    + +I+GL     + +A+    Q +     PN   +NTL+   C+  +  +  +L 
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
            ++    I PDV T   LI+G+    +   A+ LF +M  +G  PD  TY+ +I  L   
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +   L+M K ME +G A  +  YN L++   K      A ++F ++   G+  + +TY
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508

Query: 597 NTIICGYC 604
           NT+I G C
Sbjct: 509 NTLIDGLC 516



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 147/332 (44%), Gaps = 55/332 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD------LVQRLMSCLVDSNSVGQYYK 168
           Y+ LI    +  +++E+ E+   ++  GI   PD      L+Q L  CL  ++ V    +
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGIL--PDVCTFNSLIQGL--CLTRNHRVA--ME 421

Query: 169 LCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
           L   MR KG C      Y  L++ L  KG ++ A +M +Q+   G   +++T N ++   
Sbjct: 422 LFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM-ME------ 276
           C   +   A  +FD + + G   N VT++TLI+  CK  ++E A QL + M ME      
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540

Query: 277 -------------------MDLV---------PDLIIYSILIDGLFKAGRLKEGNELLLT 308
                               D+V         PD++ Y  LI GL KAGR++  ++LL +
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP-NVISYSILIKGLCQQG 367
              +G+ L    ++ V+           A+  +  ML     P + +SY I+ +GLC  G
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660

Query: 368 RLV-EACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             + EA     ++L +   P   +   L +G 
Sbjct: 661 GPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 15/265 (5%)

Query: 112 GCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           GC+     Y+ LI++    GK+DE++ +   M   G   S      L+     +N   + 
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489

Query: 167 YKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
            ++   M   G       Y  L++GL +   +E+A  +  Q+I  G  P+  T N +L  
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN--LMMEMDLV 280
            C  G I  A+ +   +   G +P++VT+ TLI+  CK  ++E A +L     M  ++L 
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYV-GIGDVGRAV 338
           P    Y+ +I GLF+  +  E   L    L++     D V +  V      G G +  AV
Sbjct: 610 PH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAV 667

Query: 339 QTYDRMLNGGFLPNVISYSILIKGL 363
                +L  GF+P   S  +L +GL
Sbjct: 668 DFLVELLEKGFVPEFSSLYMLAEGL 692


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 222/432 (51%), Gaps = 8/432 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  LM  L    + + A  + R +   G   ++VT   +++ LC   ++  A  L   + 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G +PNVV +S+L+  +CK  + E   +++  M E  + PD+++Y+ LID L K G+ K
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           + + ++   + RGL+ +VV ++ +++     G V  A+    +M   G  P+V++Y+ LI
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 361 KGLCQQGRLVEACGLFGQVLIRR--LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           KGL     + EA  L  +++  +  ++P+++T++S+I G C  G++R  F +   M + G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 419 LKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
              + V  +LLI GL+       A+    +   + L P+ F ++ L+ G C++ +     
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAE 417

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M    I+P++  +  L+  +  QG +  A  LF +M       DV+ YS +IHG 
Sbjct: 418 DLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGA 476

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K  ++     + K +   G+ PD   Y++++NM  K  +++AA  +  Q+T  G  PD+
Sbjct: 477 CKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDV 536

Query: 594 ITYNTIICGYCS 605
             ++++I GY +
Sbjct: 537 AVFDSLIQGYST 548



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 226/467 (48%), Gaps = 12/467 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           LM  L       Q   L R+MR  G       Y  L+ GL     ++ A  +  ++ + G
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN+V  + +L+  C +G+  +   +F  +   G +P+VV ++ LI++ CK  K +KA 
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            + ++M+   L P+++ Y++LI+ + K G +KE   +L    ++G+  DVV +++++   
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300

Query: 329 VGIGDVGRAVQTYDRMLNGGFL--PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
             + ++  A+   + M+ G  +  PNV++++ +I+GLC  GR+ +A  +   +       
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFF 442
           +L+TY+ LI G  +  K+R    L D M   GL+PD+   S+LI G       D      
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL 420

Query: 443 QSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            ++R   I P LF +  L+   C          LF  M   N   DV+ ++ +I G    
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKA 479

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G L +A  L   ++  GLTPD +TYS +I+   K  ++     + K M  +G  PD+A++
Sbjct: 480 GDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVF 539

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           + L+     +  ++  L+L  ++  + +  D    +T+     + N 
Sbjct: 540 DSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNE 586



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 220/456 (48%), Gaps = 20/456 (4%)

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL----CRAMRGKGFCVYEFL 184
           D++V +   M   G+         L+  L D+  V +  +L    C +       VY  L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           + G  + G  E+   +  ++ ++G  P++V    ++  LC  G+   A  + D+++  G 
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +PNVVT++ LIN  CKE  +++A  +   M E  + PD++ Y+ LI GL     + E   
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM- 310

Query: 305 LLLTALDRG---LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
            LL  + RG   +K +VV F+SV+     IG + +A Q    M   G + N+++Y++LI 
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GL +  ++ +A  L  ++    LEP   TYS LI GFCK  ++     L   M  RG++P
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEP 430

Query: 422 D-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDTV 473
           +      ++ ++   G+M  A R  F  +      ++  ++T++ G C+   LK A + +
Sbjct: 431 ELFHYIPLLVAMCEQGMMERA-RNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELL 489

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           K  +  G   + PD +T++++I   A  G + +A  +  QM   G  PDV  + ++I G 
Sbjct: 490 KSIVDEG---LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGY 546

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
                I+  L + + M    +A D  I + L   L+
Sbjct: 547 STKGEINKVLELIREMITKNIALDSKIISTLSTSLV 582



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 196/406 (48%), Gaps = 42/406 (10%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           +RG        N+ L+ L     +G A+SL D L  V    + V+++T++ A C+    +
Sbjct: 42  RRGRAEAAACLNRHLRLL----PLGEATSLLDALPSV---RDAVSYNTVLTALCRRGHHD 94

Query: 266 KAFQLYNLM-MEMDLV--PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +A  L   M +E      P+ + Y++L+  L       +   LL +    G++ DVV + 
Sbjct: 95  RAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYG 154

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++       +V +AV+    M   G  PNV+ YS L++G C+ GR  +   +F ++  +
Sbjct: 155 TLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK 214

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            +EP ++ Y+ LID  CK GK +    + D M++RGL+P                     
Sbjct: 215 GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP--------------------- 253

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                    N+  +N L++  C+     + + +   M    + PDV+T+  LI+G++   
Sbjct: 254 ---------NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVL 304

Query: 503 SLSSAILLFFQML--KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            +  A+ L  +M+  K  + P+V+T++++I GL     +     +  +ME  G   ++  
Sbjct: 305 EMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVT 364

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           YN+L+  L++   +  A++L  ++T  GLEPD  TY+ +I G+C +
Sbjct: 365 YNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKM 410



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 179/380 (47%), Gaps = 39/380 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI++  ++GK  ++  +   M   G  L P++V                        
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRG--LEPNVV------------------------ 256

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+N + ++G ++ A  + +++ ++G  P++VT N ++K L    ++  A  
Sbjct: 257 -----TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 235 LFDVLLLVGP--KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
           L + ++      KPNVVTF+++I   C   ++ +AFQ+  +M E   + +L+ Y++LI G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L +  ++++  EL+      GL+ D   +S ++  +  +  V RA      M + G  P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +  Y  L+  +C+QG +  A  LF + +       ++ YS++I G CK+G L+    L  
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 413 NMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           +++  GL PDAV  S++IN     G M  A     Q      +P++ +F++L+ G     
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKG 550

Query: 468 RATDTVKLFMLMGMYNIKPD 487
                ++L   M   NI  D
Sbjct: 551 EINKVLELIREMITKNIALD 570



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 2/159 (1%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN   +  LM   C  + A   V L   M    ++ DV+T+  LIRG+     +  A+ L
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
             +M + G+ P+V+ YS+++ G  K G+   VG  +F  M   G+ PD+ +Y  L++ L 
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVG-KVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           K      A  +   +  RGLEP+++TYN +I   C   S
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGS 270



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 98/224 (43%), Gaps = 33/224 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+ + ++ ++D + ++ + M D GI   P+L                         
Sbjct: 400 YSILIKGFCKMWQVDRAEDLLSTMRDRGI--EPELFH----------------------- 434

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+  +  +G++E A ++  + +   F  ++V  + ++   C  G +  A  
Sbjct: 435 ------YIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKE 487

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   ++  G  P+ VT+S +IN F K   +E A  +   M     +PD+ ++  LI G  
Sbjct: 488 LLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             G + +  EL+   + + + LD  + S++  + V   + G+A+
Sbjct: 548 TKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNE-GKAL 590


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 216/421 (51%), Gaps = 9/421 (2%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCI--NGQIGNASSLFDVLLLVGPKPNVVTF 251
           ++N       +++     +I+  NKIL  L    N     A SL   L   G  P++ TF
Sbjct: 47  VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTF 106

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + LIN +C  A++  AF +   +++M   PD I ++ LI GL   G++KE        L 
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLA 166

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP-NVISYSILIKGLCQQGRLV 370
            G  LD   + ++++    IG+   A+Q   R ++G  +  NV+ Y+ +I  LC+   ++
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQML-RKIDGKLVKINVVMYNTIIDSLCKHKLVI 225

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           +A  L+ Q++ +++ P ++T+S+LI GFC  G+L + F L+  M+ + + PD    ++L+
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285

Query: 431 NGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           + L  +     A       ++  ++PN+  +++LMDG C + +      +   +      
Sbjct: 286 DALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAA 345

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P+  ++  +I G      +  A+ LF  M  +G+ PD +TY+++I GL K   IS    +
Sbjct: 346 PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWEL 405

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
              M  NG   +I  YN L++ L K  ++D A+ L  ++ D+G++PD+ T+N +I G C 
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCK 465

Query: 606 L 606
           +
Sbjct: 466 V 466



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 234/475 (49%), Gaps = 14/475 (2%)

Query: 144 YLSPDLVQRLMSCL------VD-SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKG--VI 194
           +L P L+ RL S        +D  N V  +  L R         +  ++  L++      
Sbjct: 25  FLFPFLITRLYSQFQFVPSNIDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHY 84

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
             A  + R++   G  P+I T N ++   C   ++  A S+   +L +G +P+ +TF+TL
Sbjct: 85  PTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTL 144

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I   C   K+++A   ++ ++ +    D   Y  LI+GL K G  +   ++L     + +
Sbjct: 145 IKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLV 204

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
           K++VV++++++D+      V  A + Y +M+     P+V+++S LI G C  G+L EA G
Sbjct: 205 KINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFG 264

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           LF +++++ + P   T++ L+D  CK G L+   ++   M+K G+ P+ V  S L++G  
Sbjct: 265 LFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               +  A        +M   PN   + T+++G C++K   + + LF  M    I PD +
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV 384

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+  LI G+   G +S A  L  +M   G   ++ TY+ +I  L K  ++   + + K +
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  G+ PD+  +N+L+  L K   L  A  +F  L  +G   +  TYN ++ G C
Sbjct: 445 KDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLC 499



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 223/479 (46%), Gaps = 38/479 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ LI  Y  + +++ +  + A +  MG    PD +    L+  L  +  V +       
Sbjct: 106 FNILINCYCHMAEMNFAFSMMAKILKMG--YEPDTITFNTLIKGLCLNGKVKEALHFHDH 163

Query: 173 MRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +   GF + +F    L+NGL + G    A  M R++  +    N+V  N I+  LC +  
Sbjct: 164 VLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKL 223

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  L+  ++     P+VVTFS LI  FC   +LE+AF L+  M+  ++ PD   ++I
Sbjct: 224 VIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNI 283

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+D L K G LK    +L+  +  G+  +VV +SS+MD Y  +  V +A    + +   G
Sbjct: 284 LVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG 343

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN  SY  +I G C+   + EA  LF  +  + + P  +TY+SLIDG CKSG++   +
Sbjct: 344 AAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAW 403

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L D M   G +P                              N+F +N L+D  C+   
Sbjct: 404 ELVDEMHDNG-QP-----------------------------ANIFTYNCLIDALCKNHH 433

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               + L   +    I+PD+ T  +LI G+   G L +A  +F  +L +G + +  TY+ 
Sbjct: 434 VDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNI 493

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           +++GL K         +   M+ NG+ PD   Y  L+  L  +   + A KL  ++  R
Sbjct: 494 MVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIAR 552



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 143/286 (50%), Gaps = 13/286 (4%)

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE-----PS 387
           DV   V +++ +L      ++I ++ ++  L +         +    L RRLE     P 
Sbjct: 46  DVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAI---SLSRRLEFHGITPD 102

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           + T++ LI+ +C   ++   FS+   ++K G +PD +  + LI GL     + +AL F  
Sbjct: 103 IFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHD 162

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             + +    + F + TL++G C++      +++   +    +K +V+ +  +I  +    
Sbjct: 163 HVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHK 222

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A  L+ QM+ + ++PDV+T+SA+I+G      +     +F+ M    + PD   +N
Sbjct: 223 LVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFN 282

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +L++ L KE NL  A  +   +   G+ P+++TY++++ GYC +N 
Sbjct: 283 ILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQ 328



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 9/238 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   + G+I  + E+   M D G   +      L+  L  ++ V Q   L + ++
Sbjct: 386 YNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIK 445

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       +  L+ GL + G ++NA  + + ++ +G+  N  T N ++  LC  G   
Sbjct: 446 DQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFD 505

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL----IIY 286
            A +L   +   G  P+ VT+ TLI A   + + EKA +L   M+  D+V  L    ++ 
Sbjct: 506 EAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEMVL 565

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY-VGIGDVGRAVQTYDR 343
            +  +   +    K+G   + T L +GL   VV  S  +D + + +  V  A + ++R
Sbjct: 566 HLESEAKDQEKFGKKGYYAITTNLGQGLISAVVQLSLCIDLFIIFLLTVNHACEVFER 623


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 205/443 (46%), Gaps = 39/443 (8%)

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
           HM+R        P   T N +++ LC    + +A     +++  G +P+  TF++LI  +
Sbjct: 118 HMYRHAPP---APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGY 174

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL----------T 308
           C+  +LE A  L+  M       D + Y+ LI+G  +AGR+ E  EL             
Sbjct: 175 CRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHA 234

Query: 309 ALDRGL--------------KLDVVVFSSVMDAYVGIGDVG-------RAVQTYDRMLNG 347
           AL +GL              K+  + +     AY  + D+         A +  + M + 
Sbjct: 235 ALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDS 294

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +P V++ +I++   C++GR+  A  +F  +  +  EP++ TY++++ GFC +GK+   
Sbjct: 295 GLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKA 354

Query: 408 FSLYDNMIKRGLKPDAVVCSLL-----INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            +L D M + G++PD V  +LL     I+G +G A R         L  + + +N L+D 
Sbjct: 355 MALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDA 414

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+  +  +   LF  +    I+P+ +T   +I G+   G    A      M+  G  PD
Sbjct: 415 LCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPD 474

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
             TYS  I  L K K    GL     M +  V P    Y +++N L  E N   A +++G
Sbjct: 475 TYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWG 534

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
           Q+  +G  PD++TY T +  YC+
Sbjct: 535 QMVSQGCSPDVVTYTTSVRAYCN 557



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 225/517 (43%), Gaps = 29/517 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LIE +   G+IDE++E+F  M+   +Y    LV+ L     D+    +   + + M+
Sbjct: 202 YAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGL----CDAGRGEEGLCMLQKMK 257

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G+      Y  L++   R+   E A  +  ++   G +P +VTC  ++   C  G++ 
Sbjct: 258 ELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMS 317

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F+ +   G +PNV T++ ++  FC   K+ KA  L + M E  + PD++ Y++LI
Sbjct: 318 GAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLI 377

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G    G +     LL      GL  D   ++ ++DA    G V  A   +D +   G  
Sbjct: 378 RGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIR 437

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN ++++ +I GLC+ G+   AC     ++     P   TYS  I+  CK+   ++G   
Sbjct: 438 PNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFF 497

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            D M+++ +KP  V  +++IN L  +     A R + Q V     P++  + T +   C 
Sbjct: 498 IDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCN 557

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             R  +   +   M       D + +  LI G  S G    A+ +   M      P+  T
Sbjct: 558 EGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFT 617

Query: 526 Y----------SAIIH------GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           +              H       ++K   ++    +F+LM++N V      Y  +L    
Sbjct: 618 FFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFS 677

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +E  LD    L   + +  L  +   YN ++  +C L
Sbjct: 678 EERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKL 714



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 116/513 (22%), Positives = 205/513 (39%), Gaps = 60/513 (11%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + ++  Y R G++  +V +F  M   G   +      ++    ++  V +   L   MR 
Sbjct: 304 TIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRE 363

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            G       Y  L+ G    G I +AF + R +   G   +  T N ++  LC  G++  
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDE 423

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A SLFD L   G +PN VTF+T+IN  CK  K + A      M+     PD   YS  I+
Sbjct: 424 ACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIE 483

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K    +EG   +   L + +K   V ++ V++      + G A + + +M++ G  P
Sbjct: 484 NLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSP 543

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK-------- 403
           +V++Y+  ++  C +GRL EA  +  ++   R     + Y++LIDG    G+        
Sbjct: 544 DVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTIL 603

Query: 404 -------------------------------------------LRDGFSLYDNMIKRGLK 420
                                                      L D F L++ M K  + 
Sbjct: 604 KHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVP 663

Query: 421 PDAVVCSLLINGLMG----DALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKL 475
             A     ++ G       D +      ++   +P N  I+N L++  C+L+  +D   L
Sbjct: 664 SSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWAL 723

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M  +   P++I +  L+ G+ ++G    A  +F     +    D I +  II G  +
Sbjct: 724 LCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIR 783

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
             +  +   M  ++E+    P    Y +L   L
Sbjct: 784 KGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 225/436 (51%), Gaps = 37/436 (8%)

Query: 180 VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           ++EF  ++  L++      A  +HRQ+  +G   N+VT N ++      GQ   + S+F 
Sbjct: 60  IFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFA 119

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L  G  PNV+T +TLI   C +                      + Y  LI+GL K G
Sbjct: 120 NILKKGYDPNVITLTTLIKGLCLK----------------------VSYGTLINGLCKVG 157

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           + +   +LL     + ++ +VV++++++D+   +  V  A   Y  M++ G  P+V++YS
Sbjct: 158 QARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYS 217

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G    G+L +A  LF ++++  ++P + T++ L+DGFCK GK+++G +++  M+K+
Sbjct: 218 ALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ 277

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G+KP+ V    L++G      +  A   F    +  + P+   +N +++G C++K+  + 
Sbjct: 278 GIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEA 337

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           + LF  M   NI P+V+T+T LI G+   G +S A+ L  +M  RG+ PD+ITYS+I+  
Sbjct: 338 MNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDA 397

Query: 533 LFKGKNISVGL--------HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           L K   +   +         +F+ +   G   D+  Y V++     +   + AL L  ++
Sbjct: 398 LCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKM 457

Query: 585 TDRGLEPDIITYNTII 600
            D G  PD  TY  II
Sbjct: 458 EDNGRIPDAKTYEIII 473



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 195/382 (51%), Gaps = 25/382 (6%)

Query: 176 KGFCV---YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           KG C+   Y  L+NGL + G    A  + R+V  +   PN+V  N I+  +C    +  A
Sbjct: 138 KGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 197

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             L+  ++  G  P+VVT+S LI+ F    KL+ A  L+N M+  ++ PD+  ++IL+DG
Sbjct: 198 FDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 257

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
             K G++KEG  +    + +G+K +VV + S+MD Y  +  V +A   ++ M  GG  P+
Sbjct: 258 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPD 317

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             SY+I+I G C+  ++ EA  LF ++  + + P+++TY+SLIDG CKSGK+     L D
Sbjct: 318 TQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVD 377

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            M  RG+ PD +  S +++ L  +                    + +      L +  D 
Sbjct: 378 EMHDRGVPPDIITYSSILDALCKN--------------------HQVDKAIALLTKLKDQ 417

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           V   + +  YN+  DV  +TV+I+G   +G  + A+ L  +M   G  PD  TY  II  
Sbjct: 418 VFEDLFVKGYNL--DVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILS 475

Query: 533 LFKGKNISVGLHMFKLMERNGV 554
           LFK     +   + + M   G+
Sbjct: 476 LFKKDENDMAEKLLREMIARGL 497



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 168/311 (54%), Gaps = 18/311 (5%)

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ---GR 368
           +G+  ++V  + +++ +  +G    +   +  +L  G+ PNVI+ + LIKGLC +   G 
Sbjct: 89  KGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGT 148

Query: 369 LVEACGLFGQV-----LIRRL-----EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+      GQ      L+RR+     +P+++ Y+++ID  CK   + + F LY  M+  G
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           + PD V  S LI+G      + DA+  F + +   + P+++ FN L+DG C+  +  +  
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +F +M    IKP+V+T+  L+ G      ++ A  +F  M + G+ PD  +Y+ +I+G 
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGF 328

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K K +   +++FK M    + P++  Y  L++ L K   +  ALKL  ++ DRG+ PDI
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDI 388

Query: 594 ITYNTIICGYC 604
           ITY++I+   C
Sbjct: 389 ITYSSILDALC 399



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 148/296 (50%), Gaps = 25/296 (8%)

Query: 333 DVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           D    V +++R+L+     P +  +  ++  L +      A  L  Q+ ++ +  +L+T 
Sbjct: 39  DEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTL 98

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---------------MGD 436
           + LI+ F + G+    FS++ N++K+G  P+ +  + LI GL               +G 
Sbjct: 99  NILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQ 158

Query: 437 ALRFFFQSVRMT----LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
           A R   Q +R      + PN+ ++NT++D  C++K   +   L+  M    I PDV+T++
Sbjct: 159 A-RAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYS 217

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G    G L  AI LF +M+   + PDV T++ ++ G  K   +  G  +F +M + 
Sbjct: 218 ALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ 277

Query: 553 GVAPDIAIYNVLLN--MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           G+ P++  Y  L++   L+K+ N   A  +F  +   G+ PD  +YN +I G+C +
Sbjct: 278 GIKPNVVTYCSLMDGYCLVKQVN--KANSIFNTMAQGGVNPDTQSYNIMINGFCKI 331



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 128/278 (46%), Gaps = 39/278 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMS--CLV----DSNSVGQY 166
           ++ L++ + + GK+ E   +FA M   GI   P++V    LM   CLV     +NS+  +
Sbjct: 251 FNILVDGFCKDGKMKEGKTVFAMMMKQGI--KPNVVTYCSLMDGYCLVKQVNKANSI--F 306

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             + +         Y  ++NG  +   ++ A ++ +++  +  +PN+VT   ++  LC +
Sbjct: 307 NTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKS 366

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+I  A  L D +   G  P+++T+S++++A CK  +++KA  L   + +  +  DL + 
Sbjct: 367 GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD-QVFEDLFV- 424

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
                                    +G  LDV  ++ ++  +   G    A+    +M +
Sbjct: 425 -------------------------KGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMED 459

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
            G +P+  +Y I+I  L ++     A  L  +++ R L
Sbjct: 460 NGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 240/500 (48%), Gaps = 47/500 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ L++++++ G+ D+   +   M   G    P+ V    +++ L     + +  ++   
Sbjct: 240 YNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEG 299

Query: 173 MR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR       F  Y  L+ GLL KG ++ A  +  ++   G +P +VT N ++  L  +GQ
Sbjct: 300 MRLSKKASSF-TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQ 358

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A   F  +  +G +P+V+T+++L+N +CK   L++A  L+  +    L P ++ Y+I
Sbjct: 359 VEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNI 418

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDG  + G L+E   L    +++G   DV  ++ +M        +  A + +D ML+ G
Sbjct: 419 LIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKG 478

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+  +Y+  I+     G + +A  L   +++  +    +TY+ LIDG CK+G L D  
Sbjct: 479 LQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAK 538

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L   M+  GL+PD +  + LI+     GL+ +A +FF               + + DG 
Sbjct: 539 DLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFF--------------KDMISDG- 583

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
                               + P  +T+TV I     +G+L SA   F +ML+ G+ P+ 
Sbjct: 584 --------------------LAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 623

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           ITY+ +IH L +     +    F  M   G+ P+   Y +L++   KE N + A++ + +
Sbjct: 624 ITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFE 683

Query: 584 LTDRGLEPDIITYNTIICGY 603
           +   G+ PD +T+  +  G+
Sbjct: 684 MHQNGIHPDYLTHKALFKGF 703



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 221/450 (49%), Gaps = 44/450 (9%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           +AFH   ++   G  P++  CN++L+ L    +  +  ++   +L +G +P++VT++TL+
Sbjct: 188 SAFH---EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244

Query: 256 NAFCKEAKLEKAFQLYNLM-------MEMDLVPDLII----------------------- 285
           ++F KE + +K   L   M       +  D+  +++I                       
Sbjct: 245 DSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK 304

Query: 286 ------YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
                 Y+ LI GL   G +K+ ++L L   + G+   VV +++++   +  G V  A  
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQV 364

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            +  M   G  P+VI+Y+ L+ G C+ G L EA  LFG +    L P++LTY+ LIDG+C
Sbjct: 365 KFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYC 424

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLF 454
           + G L +   L + M+++G  PD    ++L+ G      +  A  FF + +   L P+ F
Sbjct: 425 RLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCF 484

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +NT +     L       +L  +M +  I  D +T+ +LI G+   G+L+ A  L  +M
Sbjct: 485 AYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKM 544

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           +  GL PD ITY+ +IH   +   +      FK M  +G+AP    Y V ++   +  NL
Sbjct: 545 VHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNL 604

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +A   F ++ + G+EP+ ITYN +I   C
Sbjct: 605 YSAYGWFRKMLEEGVEPNEITYNVLIHALC 634



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 213/431 (49%), Gaps = 10/431 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I    R G ++E+ E+   M  +    S      L++ L+    V +   L   M 
Sbjct: 277 HNVVITGLARKGDLEEAAEMVEGMR-LSKKASSFTYNPLITGLLAKGFVKKADDLQLEME 335

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  +++GLL+ G +E A     ++   G  P+++T N +L   C  G + 
Sbjct: 336 NEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLK 395

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF  L   G  P V+T++ LI+ +C+   LE+A +L   M+E   +PD+  Y+IL+
Sbjct: 396 EALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILM 455

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G   A  L    E     L +GL+ D   +++ + A + +G + +A +  + M+  G  
Sbjct: 456 KGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGIS 515

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            + ++Y+ILI GLC+ G L +A  L  +++   L+P  +TY+ LI   C+ G LR+    
Sbjct: 516 SDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKF 575

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + +MI  GL P AV  ++ I+     G +  A  +F + +   + PN   +N L+   CR
Sbjct: 576 FKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 635

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             R     + F  M    + P+  T+T+LI G   +G+   A+  +F+M + G+ PD +T
Sbjct: 636 TGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLT 695

Query: 526 YSAIIHGLFKG 536
           + A+  G  +G
Sbjct: 696 HKALFKGFDEG 706



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 168/376 (44%), Gaps = 47/376 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I   ++ G+++ +   F  M  MG  L PD++    L++    + S+ +   L   
Sbjct: 346 YNAMIHGLLQSGQVEAAQVKFVEMRAMG--LQPDVITYNSLLNGYCKAGSLKEALLLFGD 403

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +R  G       Y  L++G  R G +E A  +  +++++G +P++ T   ++K       
Sbjct: 404 LRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACS 463

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A   FD +L  G +P+   ++T I A      + KAF+L  +MM   +  D + Y+I
Sbjct: 464 LAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNI 523

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLD------------------------------- 317
           LIDGL K G L +  +L +  +  GL+ D                               
Sbjct: 524 LIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDG 583

Query: 318 ----VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
                V ++  + AY   G++  A   + +ML  G  PN I+Y++LI  LC+ GR   A 
Sbjct: 584 LAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAY 643

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             F ++L R L P+  TY+ LIDG CK G   D    Y  M + G+ PD +    L  G 
Sbjct: 644 RHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703

Query: 434 ----MGDALRFFFQSV 445
               M  A+ +   +V
Sbjct: 704 DEGHMNHAIEYLENAV 719



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 146/281 (51%), Gaps = 14/281 (4%)

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +  +  M + G  P+V   + +++ L    R  + C +  ++L   +EPS++TY++L+D 
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 398 FCKSGKLRDGFSLYDNMIKRGLK--PDAVVCSLLINGLM--GD--ALRFFFQSVRMTLIP 451
           F K G+      L   M  RG    P+ V  +++I GL   GD        + +R++   
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA 306

Query: 452 NLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + F +N L+ G      +K+A D   L + M    I P V+T+  +I G+   G + +A 
Sbjct: 307 SSFTYNPLITGLLAKGFVKKADD---LQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQ 363

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           + F +M   GL PDVITY+++++G  K  ++   L +F  +   G+AP +  YN+L++  
Sbjct: 364 VKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGY 423

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            +  +L+ A +L  ++ ++G  PD+ TY  ++ G  S N+C
Sbjct: 424 CRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKG--SHNAC 462


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 232/474 (48%), Gaps = 20/474 (4%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQR 207
           +M  L   N V     + R M   G CV     Y+ L++ L +   +  A  +  ++   
Sbjct: 217 VMKALCAVNEVDSALSVLRDMTKHG-CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 275

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G VP+  T N ++  LC   +I  A+ + + +L+ G  P+ +T+  L+N  CK  +++ A
Sbjct: 276 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAA 335

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLKLDVVVFSSVMD 326
             L+  + +    P  +I++ LI G    GRL +   +L   +   G+  DV  ++S++ 
Sbjct: 336 KDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 391

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y   G VG A++    M N G  PNV SY+IL+ G C+ G++ EA  L  ++    L+P
Sbjct: 392 GYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKP 451

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           + + ++ LI  FCK  ++ +   ++  M ++G KPD    + LI+GL     +  AL   
Sbjct: 452 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 511

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
              +   ++ N   +NTL++   R     +  KL   M       D IT+  LI+G+   
Sbjct: 512 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRA 571

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +  A  LF +ML+ GL P  I+ + +I+GL +   +   +   K M   G  PDI  +
Sbjct: 572 GEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 631

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS----LNSCLI 611
           N L+N L +   ++  L +F +L   G+ PD +TYNT++   C      ++CL+
Sbjct: 632 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLL 685



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 263/542 (48%), Gaps = 29/542 (5%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           ++ +L+  +   VA++VF  M+          R    +L  FG     +++    + ++D
Sbjct: 182 VLEILVSGNCHKVAANVFYDMLS---------RKIPPTLFTFG----VVMKALCAVNEVD 228

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFL 184
            ++ +   M+  G   +  + Q L+  L   N V +  +L   M   G CV     +  +
Sbjct: 229 SALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG-CVPDAETFNDV 287

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           + GL +   I  A  M  +++ RGF P+ +T   ++  LC  G++  A  LF  +    P
Sbjct: 288 ILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI----P 343

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           KP  V F+TLI+ F    +L+ A   L +++    +VPD+  Y+ LI G +K G +    
Sbjct: 344 KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLAL 403

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           E+L    ++G K +V  ++ ++D +  +G +  A    + M   G  PN + ++ LI   
Sbjct: 404 EVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAF 463

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++ R+ EA  +F ++  +  +P + T++SLI G C+  +++    L  +MI  G+  + 
Sbjct: 464 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 523

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  + LIN     G + +A +   + V    + +   +N+L+ G CR         LF  
Sbjct: 524 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEK 583

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    + P  I+  +LI G+   G +  A+    +M+ RG TPD++T++++I+GL +   
Sbjct: 584 MLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 643

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           I  GL MF+ ++  G+ PD   YN L++ L K   +  A  L  +  + G  P+  T++ 
Sbjct: 644 IEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSI 703

Query: 599 II 600
           ++
Sbjct: 704 LL 705



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 220/460 (47%), Gaps = 41/460 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI +  +  +++E++++   M  MG     +    ++  L   + + +  K+   M 
Sbjct: 249 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 308

Query: 175 GKGFC----VYEFLMNGLLRKGVIENA---------------------FHMHRQ------ 203
            +GF      Y +LMNGL + G ++ A                     F  H +      
Sbjct: 309 IRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKA 368

Query: 204 -----VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
                V   G VP++ T N ++      G +G A  +   +   G KPNV +++ L++ F
Sbjct: 369 VLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGF 428

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           CK  K+++A+ L N M    L P+ + ++ LI    K  R+ E  E+      +G K DV
Sbjct: 429 CKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 488

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
             F+S++     + ++  A+     M++ G + N ++Y+ LI    ++G + EA  L  +
Sbjct: 489 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 548

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----- 433
           ++ +      +TY+SLI G C++G++    SL++ M++ GL P ++ C++LINGL     
Sbjct: 549 MVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGM 608

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + +A+ F  + V     P++  FN+L++G CR  R  D + +F  +    I PD +T+  
Sbjct: 609 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNT 668

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           L+  +   G +  A LL  + ++ G  P+  T+S ++  L
Sbjct: 669 LMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 226/491 (46%), Gaps = 20/491 (4%)

Query: 128 IDESVEIFAYM-SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMN 186
           +  S+E+F++  S  G   S D+ Q L+  L  +       +L   M+ +G    E L  
Sbjct: 85  VSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFI 144

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI---GN----ASSLFDVL 239
            ++R    + A    +       + N+ +C    K   +  +I   GN    A+++F  +
Sbjct: 145 SIMRD--YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDM 202

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L     P + TF  ++ A C   +++ A  +   M +   VP+ +IY  LI  L K  R+
Sbjct: 203 LSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 262

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +LL      G   D   F+ V+        +  A +  +RML  GF P+ I+Y  L
Sbjct: 263 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYL 322

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR-G 418
           + GLC+ GR+  A  LF     R  +P+ + +++LI GF   G+L D  ++  +M+   G
Sbjct: 323 MNGLCKIGRVDAAKDLF----YRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 378

Query: 419 LKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           + PD    + LI      GL+G AL            PN++ +  L+DG C+L +  +  
Sbjct: 379 IVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 438

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M    +KP+ +    LI     +  +  A+ +F +M ++G  PDV T++++I GL
Sbjct: 439 NLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 498

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            +   I   L + + M   GV  +   YN L+N  ++   +  A KL  ++  +G   D 
Sbjct: 499 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDE 558

Query: 594 ITYNTIICGYC 604
           ITYN++I G C
Sbjct: 559 ITYNSLIKGLC 569



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 9/284 (3%)

Query: 93  QFGKTYNFF-RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL-- 149
           +  + YN    +  D L      ++ LI  + +  +I E+VEIF  M   G    PD+  
Sbjct: 433 KIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC--KPDVYT 490

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVI 205
              L+S L + + +     L R M  +G       Y  L+N  LR+G I+ A  +  +++
Sbjct: 491 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 550

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            +G + + +T N ++K LC  G++  A SLF+ +L  G  P+ ++ + LIN  C+   +E
Sbjct: 551 FQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVE 610

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A +    M+     PD++ ++ LI+GL +AGR+++G  +       G+  D V ++++M
Sbjct: 611 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLM 670

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
                 G V  A    D  +  GF+PN  ++SIL++ L  Q  L
Sbjct: 671 SWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETL 714



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 4/152 (2%)

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           +   L+ G C    A     +F  M    I P + T  V+++ + +   + SA+ +   M
Sbjct: 182 VLEILVSGNCHKVAAN----VFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDM 237

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            K G  P+ + Y  +IH L K   ++  L + + M   G  PD   +N ++  L K   +
Sbjct: 238 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 297

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + A K+  ++  RG  PD ITY  ++ G C +
Sbjct: 298 NEAAKMVNRMLIRGFTPDDITYGYLMNGLCKI 329



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 1/137 (0%)

Query: 472 TVKLFMLM-GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           T +L + M  +Y+ +P   ++ V++  + S      A  +F+ ML R + P + T+  ++
Sbjct: 159 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 218

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
             L     +   L + + M ++G  P+  IY  L++ L K   ++ AL+L  ++   G  
Sbjct: 219 KALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 278

Query: 591 PDIITYNTIICGYCSLN 607
           PD  T+N +I G C  +
Sbjct: 279 PDAETFNDVILGLCKFD 295


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 206/427 (48%), Gaps = 34/427 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++G  + G +++A  +   + Q G  P+  T N ++  LC  G++  A  L +  
Sbjct: 321 TYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGA 379

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  P V+TF+ LIN +CK  +++ A ++ + M+  +   DL  Y +LI+ L K  RL
Sbjct: 380 IARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRL 439

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE  E L      GL  +VV+++S++D Y  +G VG A++ +  M + G  PN  +Y  L
Sbjct: 440 KEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSL 499

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GL Q  +L +A  L  ++    + P ++ Y++LI G CK  +  + F L++ M K GL
Sbjct: 500 IYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGL 559

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
            PD                                 +N L D  C+  RA +     +  
Sbjct: 560 TPDEQA------------------------------YNVLTDALCKSGRAEEAYSFLVRK 589

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
           G+   K   +T+T L+ G +  G+   A +L  +M+  G   D+ TYS ++  L K K +
Sbjct: 590 GVVLTK---VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKL 646

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +  L +   M  +GV  +I  Y ++++ +IKE   D A  LF ++   G +P   TY   
Sbjct: 647 NEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVF 706

Query: 600 ICGYCSL 606
           I  YC +
Sbjct: 707 ISSYCKI 713



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 225/467 (48%), Gaps = 46/467 (9%)

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMR---GKGFCV----YEFLMNGLLRKGVIENAFHMH 201
           LV  ++SC   +  V +     +A+R   GK   +    Y   +  LLR  + E    ++
Sbjct: 108 LVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLY 167

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
             ++Q G +P+ VT N ++   C  G +  A   F +L   G + +  T + L+  +C+ 
Sbjct: 168 SHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRT 227

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
           + L KA  L  +M  M    +   Y+ILI GL++A  ++E       AL       V+VF
Sbjct: 228 SDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVRE-------AL-------VLVF 273

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
             V D                     G   N+  Y++LIKGLC++GR+ +A GL  ++ +
Sbjct: 274 MMVQD---------------------GCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPL 312

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DA 437
           R + PS+ TY+++IDG+CKSG+++D   +   M + G  PD    + LI GL G    +A
Sbjct: 313 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEA 372

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                 ++     P +  F  L++G C+ +R  D +++   M   N K D+  + VLI  
Sbjct: 373 EELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINV 432

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +  +  L  A     +M   GL P+V+ Y++II G  K   +   L +FKLME  G  P+
Sbjct: 433 LIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPN 492

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              Y  L+  LI++  L  A+ L  ++ + G+ P +I Y T+I G C
Sbjct: 493 AWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQC 539



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 210/479 (43%), Gaps = 31/479 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+ Y ++G +  ++E+F  M   G + +      L+  L+    + +   L   M+
Sbjct: 461 YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G  +K   +NAF +   + + G  P+    N +   LC +G+  
Sbjct: 521 EDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGR-- 578

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   +  L+  G     VT+++L++ F K    + A  L   M+      DL  YS+L+
Sbjct: 579 -AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLL 637

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K  +L E   +L      G+K ++V ++ ++   +  G    A   ++ M++ G  
Sbjct: 638 QALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHK 697

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +Y++ I   C+ G++ EA  L G++    + P ++TY   I+G    G +   FS 
Sbjct: 698 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFST 757

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M+    +P+     LL        L+ F   ++M+LI   +I  + M     L    
Sbjct: 758 LKRMVDASCEPNCWTYWLL--------LKHF---LKMSLINAHYIDTSGMWNWIELNTVW 806

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             ++  M  G+    P V+T++ +I G      L  A +L   ML + ++P+   Y+ +I
Sbjct: 807 QLLERMMKHGL---NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLI 863

Query: 531 H-----GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
                  LF GK++S    M +     G  P +  Y+ L+  L  E + D A  LF  L
Sbjct: 864 KCCCDIKLF-GKDVSFVTDMIEF----GFQPQLESYHYLIVGLCDEGDYDRAKSLFCDL 917



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 94/422 (22%), Positives = 171/422 (40%), Gaps = 27/422 (6%)

Query: 39  LANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTY 98
           L  +++ N  TP  Q +    + +     A+  +  L      +    +  +V  F K  
Sbjct: 550 LFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAG 609

Query: 99  N--FFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           N  F  +  + + + GC      YS L++   +  K++E++ I   M+  G+  +     
Sbjct: 610 NTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYT 669

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            ++S ++          L   M   G       Y   ++   + G IE A H+  ++ + 
Sbjct: 670 IIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERD 729

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA----- 262
           G  P++VT +  +      G +  A S    ++    +PN  T+  L+  F K +     
Sbjct: 730 GVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAH 789

Query: 263 -----------KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
                      +L   +QL   MM+  L P ++ YS +I G  KA RL+E   LL   L 
Sbjct: 790 YIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLG 849

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           + +  +  +++ ++     I   G+ V     M+  GF P + SY  LI GLC +G    
Sbjct: 850 KAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDR 909

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  LF  +L      + + +  L DG  K+G +     L   M  R  + D+   S+L +
Sbjct: 910 AKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTD 969

Query: 432 GL 433
            +
Sbjct: 970 SI 971


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/539 (24%), Positives = 265/539 (49%), Gaps = 22/539 (4%)

Query: 68  AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGK 127
           + ++ VL++    D A  + D+M++  GK  +                + L+  Y   G+
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLA------------TMLMHGYCLNGE 306

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF--CVYEF-- 183
           + +++++F  +   G+  +      L+          + YKLCR M  +G     YEF  
Sbjct: 307 VGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNL 366

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++ GLLR    ++A  + + V+  G VP++ T   ++  LC + ++  A +L+D +   G
Sbjct: 367 VIKGLLRDKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAG 425

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            KP++VT+ +L+  +C++ ++++A +LY+ M +    P+ + Y+ L+ G  K        
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAY 485

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            LL      G+      ++ +++    +  V    +   R L+ GF+P  ++Y+ +I G 
Sbjct: 486 ALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGF 545

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
            + G +  A G++ Q+  + + P+++TY+S IDG+C++        L   + + G++PD 
Sbjct: 546 VKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDI 605

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              +  I+     G M  AL F    ++  L P++ ++N+ + G   LK   +  K +  
Sbjct: 606 AAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYS 665

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    +  D   +T LI G +  G+++ A+ L+ +M+   + PD  T++A+ HGL +  +
Sbjct: 666 MIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGD 725

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           I     +   M R  V+P+I  YN+L+N  +++  L  A +L  ++   G+ PD  TY+
Sbjct: 726 IDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYD 784



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 237/498 (47%), Gaps = 36/498 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I   VR G   ++V +F  M+  G+     +    +S L       +  ++   MR
Sbjct: 188 YDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMR 247

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVI-QRGFVPNIVTCNKILKRLCINGQI 229
             GF  +E     +++ L++   ++ A  +  Q++   G   ++V    ++   C+NG++
Sbjct: 248 EAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEV 307

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           G A  LFD ++  G  P  VT+  LI     E   ++ ++L   M+E  L+P    ++++
Sbjct: 308 GKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLV 367

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I GL +  R K+   LL   +D G+  DV  +  ++        +  AV  +D+M   G 
Sbjct: 368 IKGLLRDKRWKDAIGLLKLVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGV 426

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P++++Y  L+ G C++GR+ EA  L+ ++  +   P+ +TY++L+ G+ K     + ++
Sbjct: 427 KPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYA 486

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           L + M + G+       ++LINGL                    ++ N       R+   
Sbjct: 487 LLNEMRQNGVSCGDYTYNILINGL--------------------YMVN-------RVCEV 519

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            + +K F+  G     P  +T+  +I G    G + SA  ++ QM K+G+TP+++TY++ 
Sbjct: 520 DEMLKRFLSEGFV---PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSF 576

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  +     + + +   + R+G+ PDIA YN  ++   K+ N+  AL     L   GL
Sbjct: 577 IDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGL 636

Query: 590 EPDIITYNTIICGYCSLN 607
            PD+  YN+ + GY +L 
Sbjct: 637 TPDVTVYNSFVTGYKNLK 654



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/513 (24%), Positives = 241/513 (46%), Gaps = 17/513 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMS-DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           YS +++  V++ ++DE++ +   M    G  +   L   LM     +  VG+   L   +
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G       Y  L+ G   +G+ +  + + RQ+I++G +P+    N ++K L  + + 
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A  L  +++  G  P+V T+  LI+  CK  KL +A  L++ M E  + P ++ Y  L
Sbjct: 378 KDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           + G  + GR+ E  +L     D+G   + V ++++M  Y+       A    + M   G 
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
                +Y+ILI GL    R+ E   +  + L     P+ +TY+S+I+GF K+G +   F 
Sbjct: 497 SCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFG 556

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           +Y  M K+G+ P+ V  +  I+G         A++      R  + P++  +N  +D  C
Sbjct: 557 MYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFC 616

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +    +  +   +L+    + PDV  +   + G  +   ++ A   ++ M+K+ +  D  
Sbjct: 617 KQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTE 676

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            Y+ +I G  K  N++  L ++  M  N V PD   +  L + L +  ++D A +L   +
Sbjct: 677 IYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDM 736

Query: 585 TDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
               + P+I+TYN +I      N+C+ DG  + 
Sbjct: 737 RRLDVSPNIVTYNMLI------NACVRDGKLQE 763



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 200/401 (49%), Gaps = 14/401 (3%)

Query: 219 ILKRLCINGQIG-NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           ++ R C+ G +  +A  LFD +   G KP+   ++  I+  CK    ++A Q+   M E 
Sbjct: 190 VVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREA 249

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEG----NELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
              P  + YS ++D L K  R+ E     +++LL     G K+DVV+ + +M  Y   G+
Sbjct: 250 GFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLAT---GKKMDVVLATMLMHGYCLNGE 306

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           VG+A+  +D +++ G  P  ++Y +LIKG   +G   E   L  Q++ + L PS   ++ 
Sbjct: 307 VGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNL 366

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           +I G  +  + +D   L   ++  G+ PD      LI+ L     + +A+  + +     
Sbjct: 367 VIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAG 425

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + P++  +++L+ G C   R  + +KL+  M      P+ +T+T L++G   + +  +A 
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAY 485

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  +M + G++    TY+ +I+GL+    +     M K     G  P    YN ++N  
Sbjct: 486 ALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGF 545

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           +K   + +A  ++ Q+  +G+ P+I+TY + I GYC  N C
Sbjct: 546 VKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCC 586



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 162/321 (50%), Gaps = 8/321 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ Y++    D +  +   M   G+         L++ L   N V +  ++ +   
Sbjct: 468 YTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFL 527

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y  ++NG ++ G++ +AF M+RQ+ ++G  PNIVT    +   C      
Sbjct: 528 SEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCD 587

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   +   G +P++  ++  I+ FCK+  + +A     L+++  L PD+ +Y+  +
Sbjct: 588 LAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFV 647

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G      + E ++   + + + +  D  ++++++D +  +G+V  A++ Y  M+    +
Sbjct: 648 TGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVI 707

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE--PSLLTYSSLIDGFCKSGKLRDGF 408
           P+  +++ L  GLC+ G +  A  L     +RRL+  P+++TY+ LI+   + GKL++ F
Sbjct: 708 PDDKTFTALTHGLCRSGDIDGAKRLLDD--MRRLDVSPNIVTYNMLINACVRDGKLQEAF 765

Query: 409 SLYDNMIKRGLKPDAVVCSLL 429
            L+D M+  G+ PD     +L
Sbjct: 766 QLHDEMLSSGVVPDDTTYDIL 786



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 176/391 (45%), Gaps = 9/391 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI    +  K+ E+V ++  M + G+  S      L+    +   + +  KL   M 
Sbjct: 398 YGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMP 457

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KGF      Y  LM G ++K   +NA+ +  ++ Q G      T N ++  L +  ++ 
Sbjct: 458 DKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVC 517

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               +    L  G  P  +T++++IN F K   +  AF +Y  M +  + P+++ Y+  I
Sbjct: 518 EVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFI 577

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  +        +LL+     G++ D+  +++ +D +   G++ RA+     +L  G  
Sbjct: 578 DGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLT 637

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V  Y+  + G      + EA   +  ++ +R+      Y++LIDGF K G +     L
Sbjct: 638 PDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALEL 697

Query: 411 YDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           Y  M+   + PD    + L +GL   GD   A R      R+ + PN+  +N L++ C R
Sbjct: 698 YSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVR 757

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
             +  +  +L   M    + PD  T+ +L R
Sbjct: 758 DGKLQEAFQLHDEMLSSGVVPDDTTYDILPR 788



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 134/306 (43%), Gaps = 42/306 (13%)

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           Y RM+  G +P+  S + L+          +A  LF ++  +        Y  +I    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFF----------FQSVRMT 448
            G   D   L+D M   G+KPD  V ++ I+GL  + DA R            F+   +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 449 L--IPNLFIFNTLMDGCCRLK--------RATDTVKLFMLMGMY---------------- 482
              + ++ +    MD   RLK        +  D V   MLM  Y                
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 483 ---NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               + P  +T+ VLI+G  ++G       L  QM+++GL P    ++ +I GL + K  
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              + + KL+   GV PD+  Y  L++ L K   L  A+ L+ ++ + G++P I+TY+++
Sbjct: 378 KDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 600 ICGYCS 605
           + GYC 
Sbjct: 437 LLGYCE 442


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 245/525 (46%), Gaps = 23/525 (4%)

Query: 95  GKTYNFFRLFRDSLGDFGC----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD-- 148
           G+T +  R+ R + G         Y+ L+  Y R G +D +  +   M      ++PD  
Sbjct: 89  GRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP-----VAPDAY 143

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQV 204
               L+  L D   V     L   M  +G       Y  L+  + +    E A  +  ++
Sbjct: 144 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM 203

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
             +G  PNIVT N I+  +C  G++ +A  L + L   G +P+ V+++TL+   C   + 
Sbjct: 204 RAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRW 263

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           +   +L+  MME + +P+ + + +LI    + G ++   ++L    +     +  + + V
Sbjct: 264 DDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIV 323

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +++    G V  A +  + M + G  P+ ISY+ ++KGLC+  R  +A  L  +++    
Sbjct: 324 INSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNC 383

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
            P+ +T+++ I   C+ G +     L + M + G     V  + L+NG      +  AL 
Sbjct: 384 PPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALE 443

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F     M   PN   + TL+ G C  +R     +L   M   +  P+V+T  VL+    
Sbjct: 444 LFRS---MPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFC 500

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G L  AI L  QM++ G TP++ITY+ +  G+ K  +    L +   +   GV+PD+ 
Sbjct: 501 QKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVI 560

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            ++ ++ +L KE  ++ A+++F    D G+ P  + YN I+ G C
Sbjct: 561 TFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLC 605



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 201/403 (49%), Gaps = 11/403 (2%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P++  C K+++ LC  G+  +A+ +       G   +V  ++TL+  +C+   L+ A
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +L      M + PD   Y+ LI  L   GR+ +   LL   L RG + +VV ++ +++A
Sbjct: 130 RRLIG---SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                   +A+   D M   G  PN+++Y+++I G+C++GR+ +A  L  ++     +P 
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
            ++Y++L+ G C S +  D   L+  M+++   P+ V   +LI      G++  A++   
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           Q        N  + N +++  C+  R  D  K    MG Y   PD I++T +++G+    
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
             + A  L  +M++    P+ +T++  I  L +   I   + + + M+ +G    +  YN
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYN 426

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            L+N    + ++D+AL+LF  +     +P+ ITY T++ G C+
Sbjct: 427 ALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCN 466



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 171/367 (46%), Gaps = 18/367 (4%)

Query: 67  IAQLIHVLLQSDMRDVASH-----VFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YS 116
           + + I VL Q    + A++     +    + + G+  + F+ F +++G +GC+     Y+
Sbjct: 298 VERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFK-FLNNMGSYGCNPDTISYT 356

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
            +++   R  + +++ E+   M       +       +  L     + Q   L   M+  
Sbjct: 357 TVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEH 416

Query: 177 GFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G  V    Y  L+NG   +G I++A  + R +  +   PN +T   +L  LC   ++  A
Sbjct: 417 GCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAA 473

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
           + L   +L     PNVVTF+ L+N FC++  L++A +L   MME    P+LI Y+ L DG
Sbjct: 474 AELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDG 533

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           + K    ++  ELL   + +G+  DV+ FSS++        V  A+Q +    + G  P 
Sbjct: 534 ITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPK 593

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
            + Y+ ++ GLC++  +  A      ++     P+  TY  LI+G  + G L++   L  
Sbjct: 594 ALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLS 653

Query: 413 NMIKRGL 419
            +  RG+
Sbjct: 654 MLCSRGV 660



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 8/172 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ L+  + + G +DE++E+   M + G   +P+L+    L   +    S     +L   
Sbjct: 492 FNVLVNFFCQKGFLDEAIELVEQMMEHGC--TPNLITYNTLFDGITKDCSSEDALELLHG 549

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  KG       +  ++  L ++  +E A  M       G  P  +  NKIL  LC   +
Sbjct: 550 LVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHE 609

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
           I NA      ++  G  PN  T+  LI    +E  L++A  L +++    +V
Sbjct: 610 IDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%)

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
           N+ P+  +   L R IA +    +A L+     + G  PDV   + +I  L +    S  
Sbjct: 36  NVAPNPAS-ARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDA 94

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             + +  E +G   D+  YN L+    +  +LDAA +L G +    + PD  TY  +I
Sbjct: 95  ARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLI 149


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 244/537 (45%), Gaps = 49/537 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+  ++    D +  +   M   GI + P +    +  +     + +   L   M 
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G  R+  +   + +  ++ +R  V +  T   ++K +C +G + 
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A ++   ++  G +PNVV ++TLI  F + ++   A ++   M E  + PD+  Y+ LI
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL KA R+ E    L+  ++ GLK +   + + +  Y+   +   A +    M   G L
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN +  + LI   C++ +++EAC  +  ++ + +     TY+ L++G  K+ K+ D   +
Sbjct: 555 PNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M  +G+ PD     +LING      M  A   F + V   L PN+ I+N L+ G CR
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                   +L   M +  + P+ +T+  +I G    G L+ A  LF +M  +GL PD   
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734

Query: 526 YSAIIHGLFKGKNISVGLHMF-----------------------------------KLM- 549
           Y+ ++ G  +  ++   + +F                                   +LM 
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794

Query: 550 ---ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              +R G  P+   YN++++ L KE NL+AA +LF Q+ +  L P +ITY +++ GY
Sbjct: 795 GSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 256/544 (47%), Gaps = 52/544 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LIE Y R   + +  E+   M    I +SP     ++  +  S  +   Y + + M 
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      +Y  L+   L+     +A  + +++ ++G  P+I   N ++  L    ++ 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 231 NASSLFDVLLLVGPKPNVVTFST-----------------------------------LI 255
            A S    ++  G KPN  T+                                     LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N +CK+ K+ +A   Y  M++  ++ D   Y++L++GLFK  ++ +  E+      +G+ 
Sbjct: 565 NEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            DV  +  +++ +  +G++ +A   +D M+  G  PNVI Y++L+ G C+ G + +A  L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
             ++ ++ L P+ +TY ++IDG+CKSG L + F L+D M  +GL PD+ V + L++G   
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 434 MGDALRF--FFQSVRMTLIPNLFIFNTLMDGCCRL-KRATDTVKLFMLM-GMYNI--KPD 487
           + D  R    F + +     +   FN L++   +  K    T  L  LM G ++   KP+
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            +T+ ++I  +  +G+L +A  LF QM    L P VITY+++++G  K    +    +F 
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL-----TDRGLEPDIITYNTIICG 602
                G+ PD  +Y+V++N  +KE     AL L  Q+      D G +  I T   ++ G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924

Query: 603 YCSL 606
           +  +
Sbjct: 925 FAKV 928



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/542 (24%), Positives = 236/542 (43%), Gaps = 64/542 (11%)

Query: 110 DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           D G  +  L + Y+  G I+E+V  F + S MG+ L P    RL  C V  +++ ++ +L
Sbjct: 149 DDGVLFGILFDGYIAKGYIEEAV--FVFSSSMGLELVP----RLSRCKVLLDALLRWNRL 202

Query: 170 CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI-------VTCNKILKR 222
                     ++  +  G++ + V+ +    H  +I      N+           K  + 
Sbjct: 203 D---------LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRT 253

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
             +N  +  A  L + ++  G  P   T+  LI+  CK  +LE A  L   M  + +  D
Sbjct: 254 ATLN--VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
              YS+LIDGL K         L+   +  G+ +   ++   +      G + +A   +D
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M+  G +P   +Y+ LI+G C++  + +   L  ++  R +  S  TY +++ G C SG
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFN 457
            L   +++   MI  G +P+ V+ + LI     N   GDA+R   +     + P++F +N
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           +L+ G  + KR  +     + M    +KP+  T+   I G       +SA     +M + 
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 518 GLTP-----------------------------------DVITYSAIIHGLFKGKNISVG 542
           G+ P                                   D  TY+ +++GLFK   +   
Sbjct: 552 GVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +F+ M   G+APD+  Y VL+N   K  N+  A  +F ++ + GL P++I YN ++ G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671

Query: 603 YC 604
           +C
Sbjct: 672 FC 673



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 210/438 (47%), Gaps = 15/438 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGF--VPNIVTCNKILKRLCI---NGQIGNASS 234
            Y  L++GLL+    + A  +  +++  G    P +  C      +C+    G +  A +
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC-----ICVMSKEGVMEKAKA 368

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LFD ++  G  P    +++LI  +C+E  + + ++L   M + ++V     Y  ++ G+ 
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
            +G L     ++   +  G + +VV++++++  ++     G A++    M   G  P++ 
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ LI GL +  R+ EA     +++   L+P+  TY + I G+ ++ +          M
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548

Query: 415 IKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            + G+ P+ V+C+ LIN         +A   +   V   ++ +   +  LM+G  +  + 
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            D  ++F  M    I PDV ++ VLI G +  G++  A  +F +M++ GLTP+VI Y+ +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           + G  +   I     +   M   G+ P+   Y  +++   K  +L  A +LF ++  +GL
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728

Query: 590 EPDIITYNTIICGYCSLN 607
            PD   Y T++ G C LN
Sbjct: 729 VPDSFVYTTLVDGCCRLN 746



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            VG   + V F  L + +  +  +E+A  +++  M ++LVP L    +L+D L +  RL 
Sbjct: 144 FVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD 203

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV--GR-------------------AVQ 339
              ++    ++R +  DV  +  ++ A+   G+V  G+                   A++
Sbjct: 204 LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALK 263

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
             + M+  G +P   +Y +LI GLC+  RL +A  L  ++    +     TYS LIDG  
Sbjct: 264 LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323

Query: 400 KSGKLRDGFSLYDNMIKRG--LKP---DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           K         L   M+  G  +KP   D  +C +   G+M  A   F   +   LIP   
Sbjct: 324 KGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            + +L++G CR K      +L + M   NI     T+  +++G+ S G L  A  +  +M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           +  G  P+V+ Y+ +I    +       + + K M+  G+APDI  YN L+  L K   +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGY 603
           D A     ++ + GL+P+  TY   I GY
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGY 532



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 155/396 (39%), Gaps = 82/396 (20%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI  Y +  K+ E+   +  M D GI         LM+ L  ++ V    ++ R MRGKG
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 178 FC---------------------------------------VYEFLMNGLLRKGVIENAF 198
                                                    +Y  L+ G  R G IE A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
            +  ++  +G  PN VT   I+   C +G +  A  LFD + L G  P+   ++TL++  
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 259 CKEAKLEKAFQLY----------------------------------NLMMEMDL----V 280
           C+   +E+A  ++                                  N +M+        
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+ + Y+I+ID L K G L+   EL     +  L   V+ ++S+++ Y  +G        
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL-----EPSLLTYSSLI 395
           +D  +  G  P+ I YS++I    ++G   +A  L  Q+  +       + S+ T  +L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
            GF K G++     + +NM++    PD+     LIN
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 141/338 (41%), Gaps = 61/338 (18%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
           AS +FD+MV + G T N               Y+ L+  + R G+I+++ E+   MS  G
Sbjct: 646 ASSIFDEMV-EEGLTPNVII------------YNMLLGGFCRSGEIEKAKELLDEMSVKG 692

Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAF 198
           ++ +      ++     S  + + ++L   M+ KG      VY  L++G  R   +E A 
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752

Query: 199 ------------------------------HMHRQVIQRGF--------VPNIVTCNKIL 220
                                          +  +V+ R           PN VT N ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC  G +  A  LF  +      P V+T+++L+N + K  +  + F +++  +   + 
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELL-----LTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           PD I+YS++I+   K G   +   L+       A+D G KL +    +++  +  +G++ 
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLC-QQGRLVEA 372
            A +  + M+   ++P+  +   LI   C    + VEA
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 206/427 (48%), Gaps = 34/427 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++G  + G +++A  +   + Q G  P+  T N ++  LC  G++  A  L +  
Sbjct: 321 TYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGA 379

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  P V+TF+ LIN +CK  +++ A ++ + M+  +   DL  Y +LI+ L K  RL
Sbjct: 380 IARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRL 439

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE  E L      GL  +VV ++S++D Y  +G VG A++ +  M + G  PN  +Y  L
Sbjct: 440 KEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSL 499

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GL Q  +L +A  L  ++    + P ++TY++LI G CK  +  + F L++ M + GL
Sbjct: 500 IYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 559

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
            PD                                 +N L D  C+  RA +     +  
Sbjct: 560 TPDEQA------------------------------YNVLTDALCKSGRAEEAYSFLVRK 589

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
           G+   K   +T+T L+ G +  G+   A +L  +M+  G   D+ TYS ++  L K K +
Sbjct: 590 GVVLTK---VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKL 646

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +  L +   M  +GV  +I  Y ++++ +IKE   D A  LF ++   G +P   TY   
Sbjct: 647 NEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVF 706

Query: 600 ICGYCSL 606
           I  YC +
Sbjct: 707 ISSYCKI 713



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/467 (29%), Positives = 227/467 (48%), Gaps = 46/467 (9%)

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMR---GKGFCV----YEFLMNGLLRKGVIENAFHMH 201
           LV  ++SC   +  V +     +A+R   GK   +    Y   +  LLR  + E    ++
Sbjct: 108 LVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLY 167

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
             ++Q G +P+ VT N ++   C  G +  A   F +L   G + +  T + L+  +C+ 
Sbjct: 168 SHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRT 227

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
           + L KA  L  +M  M    +   Y+ILI GL +A  ++E       AL       V+VF
Sbjct: 228 SDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVRE-------AL-------VLVF 273

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
             V D                     G   N+ +Y++LIKGLC++GR+ +A GL  ++ +
Sbjct: 274 MMVHD---------------------GCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPL 312

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DA 437
           R + PS+ TY+++IDG+CKSG+++D   +   M + G  PD    + LI GL G    +A
Sbjct: 313 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEA 372

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                 ++     P +  F  L++G C+ +R  D +++   M   N K D+  + VLI  
Sbjct: 373 EELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINV 432

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +  +  L  A     +M   GL P+V+TY++II G  K   +   L +FKLME  G  P+
Sbjct: 433 LIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPN 492

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              Y  L+  LI++  L  A+ L  ++ + G+ P +ITY T+I G C
Sbjct: 493 AWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQC 539



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 160/338 (47%), Gaps = 31/338 (9%)

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           +LY+ +++  L+PD + Y+ +I    K G L   +       + G+++D    ++++  Y
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
               D+ +A      M   G   N  SY+ILI+GLC+   + EA  L   ++      +L
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNL 284

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT 448
            TY+ LI G CK G++ D   L D M  RG+                             
Sbjct: 285 HTYTLLIKGLCKEGRIHDARGLLDEMPLRGV----------------------------- 315

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
            +P+++ +N ++DG C+  R  D + +  LM      PD  T+  LI G+   G L  A 
Sbjct: 316 -VPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAE 373

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L    + RG TP VIT++ +I+G  K + I   L +   M  +    D+  Y VL+N+L
Sbjct: 374 ELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVL 433

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           IK+C L  A +   ++   GL P+++TY +II GYC +
Sbjct: 434 IKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKV 471



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 214/492 (43%), Gaps = 31/492 (6%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            +F + L      Y+ +I+ Y ++G +  ++E+F  M   G + +      L+  L+   
Sbjct: 448 EMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDK 507

Query: 162 SVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            + +   L   M+  G       Y  L+ G  +K   +NAF +   + Q G  P+    N
Sbjct: 508 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 567

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            +   LC +G+   A   +  L+  G     VT+++L++ F K    + A  L   M+  
Sbjct: 568 VLTDALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 624

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
               DL  YS+L+  L K  +L E   +L      G+K ++V ++ ++   +  G    A
Sbjct: 625 GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHA 684

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
              ++ M++ G  P+  +Y++ I   C+ GR+ EA  L G++    + P ++TY+  I+G
Sbjct: 685 KSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFING 744

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
               G +   FS    M+    +P+     LL        L+ F   ++M+LI   ++  
Sbjct: 745 CGHMGYIDRAFSTLKRMVDASCEPNCWTYWLL--------LKHF---LKMSLINAHYVDT 793

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           + M     L      ++  M  G+    P V+T++ +I G      L  A +L   ML +
Sbjct: 794 SGMWNWIELNMVWQLLERMMKHGL---NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGK 850

Query: 518 GLTPDVITYSAIIH-----GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            ++P+   Y+ +I       LF GK +S    M +     G  P +  Y+ L+  L  E 
Sbjct: 851 DISPNEEIYTMLIKCCCDIKLF-GKAVSFVTDMIEF----GFQPQLESYHYLIVGLCDEG 905

Query: 573 NLDAALKLFGQL 584
           + D A  LF  L
Sbjct: 906 DYDRAKSLFCDL 917



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 130/596 (21%), Positives = 238/596 (39%), Gaps = 71/596 (11%)

Query: 15  INKCYCSESKTHISDLQFN-------QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNI 67
           I KC   E+K  ++++  N          +I+    K      A++ FK   +    PN 
Sbjct: 434 IKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNA 493

Query: 68  ---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVR 124
                LI+ L+Q      A  +  KM               D +      Y+ LI+   +
Sbjct: 494 WTYGSLIYGLIQDKKLHKAMALITKMQ-------------EDGITPGVITYTTLIQGQCK 540

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK-LCRAMRGKGFCVYEF 183
             + D +  +F  M   G+         L   L  S    + Y  L R         Y  
Sbjct: 541 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTS 600

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++G  + G  + A  +  +++  G   ++ T + +L+ LC   ++  A S+ D + + G
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSG 660

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            K N+V ++ +I+   KE K + A  L+N M+     P    Y++ I    K GR++E  
Sbjct: 661 VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAE 720

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L+      G+  DVV ++  ++    +G + RA  T  RM++    PN  +Y +L+K  
Sbjct: 721 HLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHF 780

Query: 364 CQ----QGRLVEACGLFGQV-------LIRR-----LEPSLLTYSSLIDGFCKSGKLRDG 407
            +        V+  G++  +       L+ R     L P+++TYSS+I GFCK+ +L + 
Sbjct: 781 LKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEA 840

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             L D+M+ + + P                              N  I+  L+  CC +K
Sbjct: 841 CVLLDHMLGKDISP------------------------------NEEIYTMLIKCCCDIK 870

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
                V     M  +  +P + ++  LI G+  +G    A  LF  +L      + + + 
Sbjct: 871 LFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWK 930

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            +  GL K  ++     +   M+      D   Y++L +  I+E +     +L G+
Sbjct: 931 ILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDS-IREASGSVVSELRGE 985


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 213/425 (50%), Gaps = 7/425 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y +L+  L R G I+ A     ++ +   VP++ T N ++  LC   +I  A   F+ + 
Sbjct: 13  YCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM- 71

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
              P+P+VVT++TL+   CK  ++ +A  L+  M    + P  + Y+ LID   K  + +
Sbjct: 72  ---PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFE 128

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               LL     R     V  + S+++       V +A Q ++ M   G  P+ ++Y+ LI
Sbjct: 129 TAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI 188

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC + RL EA  L   ++    +P  +T+++LI+G C + ++++ F L+  M K+G  
Sbjct: 189 HGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCA 248

Query: 421 PDAVVCSLLINGL-MGDALRFFFQSVR-MTLIPNLFIFNTLMDGCCRLKRATD-TVKLFM 477
           PD V  ++L++ L +   LR     VR     P   I  T +      +R  D   +L  
Sbjct: 249 PDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQ 308

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    + P+V+T+T   +G+        A   F +ML++G+ PD++ Y+ ++ G  K  
Sbjct: 309 KMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKAN 368

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            + +   M + M+++G+ P+I  YN L+    ++  ++A  +L   +  RG +PD+ T++
Sbjct: 369 RLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWS 428

Query: 598 TIICG 602
           T++ G
Sbjct: 429 TLVAG 433



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 184/398 (46%), Gaps = 42/398 (10%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           KPN +++  L+ A C+  K++KA      M    LVPD+  Y+++ID L KA R+    E
Sbjct: 7   KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
              T  +     DVV +++++      G V +A   +  M   G  P+ ++Y+ LI   C
Sbjct: 67  FFETMPEP----DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           +  +   A GL   +  R+  P++ +Y S+I+G CK+ K+   + L++ M   G KPD V
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + LI+GL     + +A       V  +  P+   F  L++G C   R  +   LF  M
Sbjct: 183 TYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 242

Query: 480 GMYNIKPDVITHTVLI---------------------------------RGIASQGSLSS 506
                 PD++THTVL+                                 R +  +     
Sbjct: 243 AKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDR 302

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L  +M +RG+ P+V+TY+A   GL   K        F+ M   G+ PD+  YNVL++
Sbjct: 303 AARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVD 362

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              K   LD A K+   +   GL P+I+TYNT++  +C
Sbjct: 363 GFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHC 400



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 203/478 (42%), Gaps = 75/478 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y +L++   R GKID++    A M+     L PD+     + ++D+        LC+A R
Sbjct: 13  YCYLVKALCRTGKIDKACSTIAEMAREK--LVPDVFT--YNVVIDT--------LCKARR 60

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                              I  A      + +    P++VT N +L  LC NG++  A S
Sbjct: 61  -------------------ISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACS 97

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF  +   G  P+ VT++TLI+ FCK  + E A+ L  LM      P +  Y  +I+GL 
Sbjct: 98  LFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLC 157

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  ++ +  +L       G K D V +++++        +  A      M+   F P+ I
Sbjct: 158 KNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKI 217

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN- 413
           +++ LI+GLC   R+ EA  LF  +  +   P L+T++ L+   C   KLR   S+  N 
Sbjct: 218 TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNY 277

Query: 414 --------------------------------MIKRGLKPDAVVCSLLINGLMGD----- 436
                                           M +RG+ P+ V  +    GL GD     
Sbjct: 278 PACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGL-GDWKEGM 336

Query: 437 -ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
            A R F + +   + P++  +N L+DG C+  R     K+   M    + P+++T+  L+
Sbjct: 337 RAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLV 396

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
                +G + +   L   M+ RG  PDV T+S ++ GLF+   +        L    G
Sbjct: 397 GHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 34/257 (13%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN +SY  L+K LC+ G++ +AC    ++   +L P + TY+ +ID  CK+ ++      
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           ++ M      P+                            P++  +NTL+ G C+  R  
Sbjct: 68  FETM------PE----------------------------PDVVTYNTLLGGLCKNGRVA 93

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
               LF  M    I P  +T+T LI          +A  L   M  R  +P V +Y +II
Sbjct: 94  QACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSII 153

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +GL K + +     +F+ M+  G  PD   YN L++ L  +  L  A  L   + +   +
Sbjct: 154 NGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQ 213

Query: 591 PDIITYNTIICGYCSLN 607
           PD IT+  +I G C+ +
Sbjct: 214 PDKITFTALIEGLCTTD 230



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 4/124 (3%)

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
           + KP+ +++  L++ +   G +  A     +M +  L PDV TY+ +I  L K + IS  
Sbjct: 5   DCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRA 64

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +  F+ M      PD+  YN LL  L K   +  A  LFG +   G+ P  +TY T+I  
Sbjct: 65  IEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDV 120

Query: 603 YCSL 606
           +C +
Sbjct: 121 FCKM 124


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 255/534 (47%), Gaps = 18/534 (3%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           R+  + +      Y+ L+    +  ++ E+VE+   M ++G+       + L+       
Sbjct: 246 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 305

Query: 162 SVGQYYKLCRAMRGKGFCVYE----FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            +    ++   M   GF   E    F+++ L +K ++E AF +  ++   G VPN+   N
Sbjct: 306 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 365

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++ +LC N +  +A  LF  +   G +PN VT++ LI+A CK   +E A  L++ M + 
Sbjct: 366 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 425

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            +   +  Y+ LI+G  K G L     LL   +  GL      +S ++      GD+   
Sbjct: 426 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 485

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++ +  M   G   N  +++ LI G C+  ++ EA  LF +++   + P+ +T++ +I+G
Sbjct: 486 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 545

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
           +C  G +R  F LYD M++ GLKPD      LI+GL     +  A  F         + N
Sbjct: 546 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLN 605

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
            F    L+ G  R  R T+T  L+  M +  +K D+++ T+++     Q     + +LF 
Sbjct: 606 NFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 665

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M ++G+ PD I Y+ +I  L K +N+   L+ +  M  +G +P+   + VL+N L K  
Sbjct: 666 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSG 725

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCS---------LNSCLIDGYFKS 617
            L +A  L  ++    + P+  TYN  +  + +         L+S ++ G+  S
Sbjct: 726 YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS 779



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 248/521 (47%), Gaps = 28/521 (5%)

Query: 102 RLFRDSLG----DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           RLF++  G         Y+ LI    + G I++++ +F  M D GI ++      L++  
Sbjct: 382 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 441

Query: 158 VDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
               S+ +   L   M  +G       Y  L+ GL R G + +   +HR++ +RG   N 
Sbjct: 442 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 501

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T   ++   C + ++  A+ LFD ++     PN VTF+ +I  +C    + KAFQLY+ 
Sbjct: 502 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 561

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M+EM L PD   Y  LI GL     + + NE +    +    L+    ++++  +   G 
Sbjct: 562 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 621

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
                  +D M   G   +++S++I++    +Q    ++C LF ++  + ++P  + Y+ 
Sbjct: 622 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 681

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMT 448
           +ID   K   +    + +D M+  G  P+ V  ++LIN     G +G A     + +   
Sbjct: 682 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 741

Query: 449 LIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           ++PN F +N  +D       +++A D +   ML G       +++  +LI+G+   G + 
Sbjct: 742 VLPNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHL---ASIVSFNILIKGLCKAGKIQ 797

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            AI L  ++ + G +PD I+YS IIH L K  +I+    ++  M   G+ PD+  YN+  
Sbjct: 798 EAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI-- 855

Query: 566 NMLIKECNL----DAALKLFGQLTDRGLEPDIITYNTIICG 602
              I+ CN+    D AL ++  +   G++P+  TY  ++ G
Sbjct: 856 --FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 216/467 (46%), Gaps = 41/467 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++ L +    ++A  + +++  RG  PN VT   ++  LC  G I +A  LFD +
Sbjct: 363 AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKM 422

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G K  V  +++LIN +CK+  L++A  L + M++  L P    YS LI GL + G L
Sbjct: 423 RDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDL 482

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               EL     +RG+  +   F+++++ +     +  A + +D+M++   +PN ++++++
Sbjct: 483 SSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVM 542

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC-------------------- 399
           I+G C  G + +A  L+ Q++   L+P   TY SLI G C                    
Sbjct: 543 IEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYA 602

Query: 400 ---------------KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR----- 439
                          + G+  + + L+D M  RG+K D V  ++++   +    +     
Sbjct: 603 VLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 662

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F +     + P+   +  ++D   + +     +  +  M +    P+ +THTVLI  + 
Sbjct: 663 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 722

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G L SA LL  +ML   + P+  TY+  +       ++     +   M +  +A  I 
Sbjct: 723 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIV 781

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +N+L+  L K   +  A+ L  ++T+ G  PD I+Y+TII   C +
Sbjct: 782 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKM 828



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 201/405 (49%), Gaps = 5/405 (1%)

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           +  G   N  T ++IL  L    Q   A  LFD +L  G   +   ++  I A+C+   L
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           + A  L   M    +    + Y++L+ GL K  R++E  E+    ++ G+  D V + ++
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +  +  + ++  A++    M+  GF+P+  + S +I  L ++  + EA  L  ++    +
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALR 439
            P++  Y++LID  CK+ +  D   L+  M  RGL+P+ V  ++LI+     G++ DAL 
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F +     +   ++ +N+L++G C+         L   M    + P   +++ LI G+ 
Sbjct: 418 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 477

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G LSS + L  +M +RG+  +  T++A+I+G  K K +     +F  M  + V P+  
Sbjct: 478 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 537

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +NV++       N+  A +L+ Q+ + GL+PD  TY ++I G C
Sbjct: 538 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 582



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 189/408 (46%), Gaps = 35/408 (8%)

Query: 70  LIHVLLQSDMRDVASHVFDKM----VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRI 125
           LI+   +    D A+ +FDKM    VI    T+N                  +IE Y  +
Sbjct: 507 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV-----------------MIEGYCLV 549

Query: 126 GKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
           G I ++ +++  M +MG  L PD    + L+S L  ++ V +  +    +      +  F
Sbjct: 550 GNIRKAFQLYDQMVEMG--LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 607

Query: 184 ----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
               L+ G  R+G     +H+  ++  RG   ++V+   I+           +  LF  +
Sbjct: 608 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 667

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KP+ + ++ +I+A  KE  + +A   ++ M+     P+ + +++LI+ L K+G L
Sbjct: 668 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYL 727

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L    L   +  +   ++  +D +   GD+ +A   +  ML G  L +++S++IL
Sbjct: 728 GSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG-HLASIVSFNIL 786

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKGLC+ G++ EA  L  ++      P  ++YS++I   CK G +   F L++ M+ +GL
Sbjct: 787 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 846

Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           KPD V  ++ I     +G    AL  +   +R  + PN   +  L+ G
Sbjct: 847 KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 123/556 (22%), Positives = 234/556 (42%), Gaps = 94/556 (16%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
           NA++  L K      A + FK        PN    A LIH L +  M + A  +FDKM  
Sbjct: 365 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 424

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +  K   +              Y+ LI  Y + G +D +  + + M   G+  +      
Sbjct: 425 KGIKVTVY-------------PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 471

Query: 153 LMSCLVDSNSVGQYYKLCRAM--RGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRG 208
           L++ L  +  +    +L R M  RG  +  Y F  L+NG  +   ++ A  +  ++I   
Sbjct: 472 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 531

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC--------- 259
            +PN VT N +++  C+ G I  A  L+D ++ +G KP+  T+ +LI+  C         
Sbjct: 532 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 591

Query: 260 --------------------------KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
                                     +E +  + + L++ M    +  DL+ ++I++   
Sbjct: 592 EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 651

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K    ++   L     ++G+K D + ++ ++DA     ++ +A+  +D+M+  G+ PN 
Sbjct: 652 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNT 711

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID----------------- 396
           +++++LI  LC+ G L  A  L  ++L   + P+  TY+  +D                 
Sbjct: 712 VTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 771

Query: 397 -----------------GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD- 436
                            G CK+GK+++   L   + + G  PD +  S +I+ L  MGD 
Sbjct: 772 MLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 831

Query: 437 --ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A   + + +   L P++  +N  +  C     +   + ++  M    ++P+  T+  L
Sbjct: 832 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 891

Query: 495 IRGIASQGSLSSAILL 510
           + GI+   S   A+LL
Sbjct: 892 LSGISLMVSKGQALLL 907



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 49/99 (49%)

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF +ML+ G+  D   Y+A I    + +N+     +   ME  GV      YNVL+  L 
Sbjct: 208 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLC 267

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           K   +  A+++   + + G+  D +TY T++ G+C +  
Sbjct: 268 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 306


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/578 (24%), Positives = 266/578 (46%), Gaps = 70/578 (12%)

Query: 44  KTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRL 103
           +++ P  AIQFF W             +H           +H+ D ++++ G  +   ++
Sbjct: 3   RSSRPDLAIQFFDWAG---EQDGYKHDVHSY---------NHLLD-ILVKSGHQFRTGKV 49

Query: 104 FRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
           ++D L   GC      +  LI    + G+   ++E    + +  +  +PD+         
Sbjct: 50  YKDLLHS-GCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSV--APDVY-------- 98

Query: 159 DSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
                                ++ FL++GL + G  + A  +   +      P+I T N 
Sbjct: 99  ---------------------IFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNT 137

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPK--PNVVTFSTLINA-FCKEAKLEKAFQLYNLMM 275
           ++  LC +G +  A  L + ++  G K  P++VT++TLINA  CK+  +E+A ++ + M 
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMK 197

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
                PD+I Y+ +I  L  AGR+ E  E+L T        D+V F++++D +   G + 
Sbjct: 198 LAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLP 254

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           RA++  + M     LP+VI+Y+IL+ GLC+ G++  A  L  +++ +   P ++ Y+SL+
Sbjct: 255 RALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLV 314

Query: 396 DGFCKSGKLRDGFSLYDNMIKR---------GLKPDAVVCSLLINGLMGD-----ALRFF 441
           DG CKSG++ +   L   M  R          + P     ++++ GL+ D     A+   
Sbjct: 315 DGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI 374

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
              V    +P++  +NTL+DG C+  R  +   L   M      P+ +T   ++ G+   
Sbjct: 375 SDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRV 434

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +  A  L  +M ++   P+V+ Y+++I GL K   +     +   M   GVA D   Y
Sbjct: 435 GRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAY 494

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
             L+  +I    +  A+ ++ ++  RG  PD  T  T+
Sbjct: 495 RKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 223/441 (50%), Gaps = 20/441 (4%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++ L++ G       +++ ++  G  PN+VT   +++  C  GQ   A      L 
Sbjct: 30  YNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALD 89

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                P+V  F+ LI+   K+   ++A +L+  M    + PD+  Y+ +I GL K+G L+
Sbjct: 90  EFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLE 149

Query: 301 EGNELLLTALDRGLK--LDVVVFSSVMDAYV-GIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           +  ELL   + RG K   D+V ++++++A +   GDV  A++  D M   G  P+VI+Y+
Sbjct: 150 KARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYN 209

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I  LC  GR+VEA  +   +      P L+T+++L+DGFCK+G L     + + M + 
Sbjct: 210 SIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 266

Query: 418 GLKPDAVVCSLLINGL--MGDALRFFF---QSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            + PD +  ++L+NGL  +G     F+   + VR   IP++  + +L+DG C+     + 
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 326

Query: 473 VKLFMLMGMY---------NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            KL   M            N+ P + T+ +++ G+   GS+S A+ L   ++ RG  PDV
Sbjct: 327 HKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV 386

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY+ +I GL K   +     +   M   G  P+      ++  L +   +D A  L  +
Sbjct: 387 VTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE 446

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           ++ +   P+++ Y ++I G C
Sbjct: 447 MSRKRHAPNVVVYTSLIDGLC 467



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 199/416 (47%), Gaps = 49/416 (11%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           Q G+  ++ + N +L  L  +G       ++  LL  G  PN+VTF  LI   CK  +  
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A +    + E  + PD+ I++ LI GLFK G                            
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNFLIHGLFKDG---------------------------- 111

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR--R 383
                  +  +AV+ ++ M +    P++ +Y+ +I GLC+ G L +A  L  +++ R  +
Sbjct: 112 -------NPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGK 164

Query: 384 LEPSLLTYSSLID-GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRF 440
             P ++TY++LI+ G CK G + +   + D M   G  PD +  + +I+ L   G  +  
Sbjct: 165 SAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEA 224

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
                 M+  P+L  FNTL+DG C+       +++   M   NI PDVIT+T+L+ G+  
Sbjct: 225 AEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 284

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV------ 554
            G +  A  L  +++++G  PDVI Y++++ GL K   I     + K M    +      
Sbjct: 285 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVS 344

Query: 555 ---APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
               P +  YN++L  LIK+ ++  A+ L   L  RG  PD++TYNT+I G C  N
Sbjct: 345 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKAN 400



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/447 (23%), Positives = 216/447 (48%), Gaps = 32/447 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N ++  L K  NP  A++ F+   +   +P+I     +I  L +S   + A  + ++M+ 
Sbjct: 101 NFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIR 160

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
           + GK          S  D     + +     + G ++E++EI   M   G   +PD++  
Sbjct: 161 RGGK----------SAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP--APDVITY 208

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMR-GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
             ++  L  +  V +  ++ + M        +  L++G  + G++  A  +  ++ +   
Sbjct: 209 NSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI 268

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           +P+++T   ++  LC  GQ+  A  L + ++  G  P+V+ +++L++  CK  ++E+A +
Sbjct: 269 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 328

Query: 270 LYNLM---------MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
           L   M         + +++VP L  Y+I++ GL K G + +   L+   + RG   DVV 
Sbjct: 329 LVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 388

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           +++++D       V  A    D M + G  PN ++   ++ GLC+ GR+ +A  L  ++ 
Sbjct: 389 YNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 448

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMG 435
            +R  P+++ Y+SLIDG CKS ++ D   + D M  +G+  D      ++ S++  G + 
Sbjct: 449 RKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVA 508

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDG 462
           +A+  + + V    +P+     TL + 
Sbjct: 509 EAMAMYDEMVARGFLPDGSTSKTLEEA 535



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 141/293 (48%), Gaps = 14/293 (4%)

Query: 337 AVQTYDRM-LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           A+Q +D      G+  +V SY+ L+  L + G       ++  +L     P+L+T+  LI
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLI 450
            G CK+G+          + +  + PD  + + LI+GL  D     A++ F       + 
Sbjct: 70  RGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVN 129

Query: 451 PNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIR-GIASQGSLSS 506
           P++F +NT++ G C+   L++A + ++  +  G  +  PD++T+  LI  GI   G +  
Sbjct: 130 PDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKS-APDIVTYNTLINAGICKDGDVEE 188

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A+ +   M   G  PDVITY++IIH L     +     + K M     +PD+  +N LL+
Sbjct: 189 ALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLD 245

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
              K   L  AL++  ++    + PD+ITY  ++ G C +    +  Y   +I
Sbjct: 246 GFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 245/522 (46%), Gaps = 35/522 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+   +R  ++     I + M   G Y S  +   L+     S      YKL + M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 175 G----KGFCVYEFLMNG------LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                 G+ VY  L+ G      L    V+E A   + +++    V N V  + + + LC
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   A S+   ++  G  P+  T+S +I   C  +K++ AF L+  M    +VPD+ 
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ILID   K G L++  +     +  G   +VV +++++ AY+    +  A + ++ M
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL------------------IRRLEP 386
           L+ G +PNV++Y+ LI G C+ G++ +AC ++ ++                   IR  +P
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR--DP 634

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           ++ TY +L+DG CK+ K+++   L D M   G +P+ +V   LI+G      + +A   F
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +       PN++ +++L+D   + KR    +K+   M   +  P+VI +T +I G+   
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A  L   M ++G  P+V+TY+A+I G  K   +   L + + M   G AP+   Y
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            VL+N       LD A +L  ++        +  Y  +I G+
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 207/450 (46%), Gaps = 58/450 (12%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G  E A+ + R+++ +GF+P+  T +K++  LC   ++ NA  LF+ +      P+V T+
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + LI++FCK   L++A + ++ M+     P+++ Y+ LI    KA ++   NEL    L 
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP----------------NVIS 355
            G   +VV +++++D +   G + +A Q Y RM     +P                N+ +
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFT 638

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  L+ GLC+  ++ EA  L   + +   EP+ + Y +LIDGFCK GKL +   ++  M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 416 KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +RG  P+    S LI+ L  D     AL+   + +  +  PN+ I+  ++DG C++ +  
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 471 DTVKLFMLM-----------------------------------GMYNIKPDVITHTVLI 495
           +  +L  +M                                   G     P+ +T+ VLI
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
               + G L  A  L  +M +      +  Y  +I G  +   IS+GL     +  N   
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGL--LDEIAENVAV 876

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           P I  Y +L++   K   L+ AL+L   ++
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKXMS 906



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 153/625 (24%), Positives = 267/625 (42%), Gaps = 74/625 (11%)

Query: 46  NNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFR 105
            NP   ++FF W    +   +   + H LL+     +     D++  QF       R  R
Sbjct: 140 KNPELGVKFFIWAGRQIGYGHTGPVYHALLEV----LGCGGNDRVPEQF------LREIR 189

Query: 106 DSLGD-FGCDYSFLIENYVRIGKIDESVEIFAYMSDMG-------------IYLSPD--- 148
           D   +  G   + LI    R G  + ++E    + D+G             ++L  D   
Sbjct: 190 DEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLD 249

Query: 149 ---LVQRLMSCL---VDSNSVGQY-YKLCRAMRGK-------------GFCVYEFLMNGL 188
              LV R MS     +D  ++G + + LC+A R +                +Y  +++GL
Sbjct: 250 TAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGL 309

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
               + E A     ++     +PN+VT   +L       Q+G    +  +++  G  P+ 
Sbjct: 310 CEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSR 369

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
             F++LI+A+C+      A++L   M +    P  ++Y+ILI G+    +L   + L L 
Sbjct: 370 RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELA 429

Query: 309 A------LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
                  LD  + L+ V  S++     G G   +A      M++ GF+P+  +YS +I  
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC   ++  A  LF ++    + P + TY+ LID FCK G L+     +D M++ G  P+
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + LI+       M  A   F   +    IPN+  +  L+DG C+  +     +++ 
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609

Query: 478 LM---------GMY------NIK-PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
            M          MY      NI+ P++ T+  L+ G+     +  A  L   M   G  P
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           + I Y A+I G  K   +     +F  M   G  P++  Y+ L++ L K+  LD ALK+ 
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVL 729

Query: 582 GQLTDRGLEPDIITYNTIICGYCSL 606
            ++ +    P++I Y  +I G C +
Sbjct: 730 SRMLENSCAPNVIIYTEMIDGLCKV 754



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/597 (21%), Positives = 245/597 (41%), Gaps = 110/597 (18%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFR--DSLGDFGCDYSFLIENYVRIGKI------------ 128
           +  +F+ ++  + ++ ++   ++    +GD GC   +++ N + IG I            
Sbjct: 368 SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN-ILIGGICGNEKLPSLDVL 426

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--------- 179
           + + + +  M D  + L+   V  L  CL  +    + Y + R M  KGF          
Sbjct: 427 ELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKV 486

Query: 180 ------------------------------VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
                                          Y  L++   + G+++ A     ++++ G 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PN+VT   ++       ++ +A+ LF+++L  G  PNVVT++ LI+  CK  ++EKA Q
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 270 LYNLMM------EMDLV----------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +Y  M       ++D+           P++  Y  L+DGL KA ++KE  +LL      G
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            + + +V+ +++D +  +G +  A   + +M   G+ PNV +YS LI  L +  RL  A 
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +  ++L     P+++ Y+ +IDG CK GK  + + L   M ++G  P+ V  + +I+G 
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM------- 481
                +   L    Q       PN   +  L++ CC      D  +L   M         
Sbjct: 787 GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846

Query: 482 ---------YNIK-----------------PDVITHTVLIRGIASQGSLSSAILLFFQM- 514
                    +N +                 P +  + +LI      G L  A+ L   M 
Sbjct: 847 AGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMS 906

Query: 515 -LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
                   D   YS++I  L     +     ++  M + G  P+++I+  L+  LI+
Sbjct: 907 SCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 155/391 (39%), Gaps = 67/391 (17%)

Query: 26  HISDLQFNQANAILANLIKTNNPTPAIQ-FFKWTHNCVSSPNI---AQLIHVLLQSDMRD 81
           H    Q  +A  I A + + N   P +  +FK     +  PNI     L+  L ++    
Sbjct: 595 HCKSGQIEKACQIYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVK 653

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFA 136
            A  + D M ++                  GC+     Y  LI+ + ++GK+DE+  +F 
Sbjct: 654 EARDLLDVMSVE------------------GCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695

Query: 137 YMSDMG----IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKG 192
            MS+ G    +Y    L+ RL        ++    ++          +Y  +++GL + G
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
             + A+ +   + ++G  PN+VT   ++      G++     L   +   G  PN VT+ 
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815

Query: 253 TLINAFCKEAKLEKAFQLYNLM---------------------------------MEMDL 279
            LIN  C    L+ A QL + M                                  E   
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVA 875

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNEL--LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           VP +  Y ILID   KAGRL+   EL   +++       D  ++SS++++      V +A
Sbjct: 876 VPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKA 935

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
            + Y  M+  G +P +  +  L+KGL +  R
Sbjct: 936 FELYADMIKRGGIPELSIFFYLVKGLIRINR 966


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 250/527 (47%), Gaps = 17/527 (3%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +F K    FR+  +        ++ +I    + GK++ ++E+F  M  +GI  SP++V  
Sbjct: 201 EFEKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGI--SPNVVTY 258

Query: 153 --LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             +++ L  +  +   ++L   M  KG       Y  L+NGL++    +   H+  ++I 
Sbjct: 259 NCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIG 318

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            GF PN+V  N ++   C  G I  A  + DV++     P  VT  +L+  FCK  ++E 
Sbjct: 319 AGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEH 378

Query: 267 AFQLYNLMME--MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           A      ++   + + PD   YS+ +  L K  R           L R  +   ++ + +
Sbjct: 379 AENALEEILSSGLSIHPD-NCYSV-VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTML 436

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +      G    A + + R+L  G   + ++ + LI GLC  G+L EA  +  ++L R L
Sbjct: 437 VCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGL 496

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
               +TY++LI GFC  GK+   F L + M KRG++PD    + L+ GL     + DA++
Sbjct: 497 PMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIK 556

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            + +     LI N+  +  +M+G C+  R  D   LF  +    ++ + I + ++I+   
Sbjct: 557 LWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHC 616

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G++++A+ L   M  +G+ P+  TYS++IHG+     +    H+   M + G  P++ 
Sbjct: 617 QNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVV 676

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            Y  L+    K   +D A   + ++    + P+  TY  +I GYC L
Sbjct: 677 CYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKL 723



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/533 (23%), Positives = 253/533 (47%), Gaps = 44/533 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    + G++D + E+   M+  G+  +      L++ L+  N   +   +   M 
Sbjct: 258 YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMI 317

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G GF     V+  L++G  + G IE A  +   +I +   P  VT   +++  C + QI 
Sbjct: 318 GAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIE 377

Query: 231 NASSLFDVLLLVG----P-------------------------------KPNVVTFSTLI 255
           +A +  + +L  G    P                               +P+ +  + L+
Sbjct: 378 HAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV 437

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
              CK+ K  +A +L+  ++E       +  + LI GL  AG+L E + ++   L+RGL 
Sbjct: 438 CGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLP 497

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           +D + +++++  +   G V    +  + M   G  P++ +Y+ L++GLC  G+L +A  L
Sbjct: 498 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKL 557

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI----- 430
           + +     L  ++ TY  +++G+CK+ ++ D  +L++ ++ + ++ +++V +++I     
Sbjct: 558 WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQ 617

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           NG +  AL+         ++PN   +++L+ G C +    D   L   M      P+V+ 
Sbjct: 618 NGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVC 677

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +T LI G    G + +A   + +M+   + P+  TY+ +I G  K  N+    ++   M+
Sbjct: 678 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 737

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +G+ PD+  YNVL N   K  ++D A K+  Q+   GL  D ITY T++ G+
Sbjct: 738 ESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 217/432 (50%), Gaps = 22/432 (5%)

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           G  + GV     H    V++ G   +  +CN +L  L     I   + L   +     +P
Sbjct: 258 GDQKNGVAWEVLHC---VMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRP 314

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMM------EMDLVPDLIIYSILIDGLFKAGRLK 300
           +VVTF  L+N  CK  ++++A Q+++ +        + + PD+++++ LIDGL K G+ +
Sbjct: 315 SVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEE 374

Query: 301 EG----NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           +G     E+ +  ++R    + V ++ ++D +   G+  RA + + +M   G  PNVI+ 
Sbjct: 375 DGLSLLEEMKMGNINRP---NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITL 431

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + L+ GLC+ GR+  A   F ++  + L+ +  TY++LI  FC    +      ++ M+ 
Sbjct: 432 NTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS 491

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G  PDAVV   LI+GL     M DA     +        +   +N L+ G C+ K+   
Sbjct: 492 SGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLER 551

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             +L   M    +KPD IT+  LI  +   G  ++A  +  +M+K GL P V+TY AIIH
Sbjct: 552 VYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIH 611

Query: 532 GLFKGKNISVGLHMFKLM-ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
                KN+  G+ +F  M   + V P+  IYN+L++ L +  ++D A+ L   +  + + 
Sbjct: 612 AYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVR 671

Query: 591 PDIITYNTIICG 602
           P+  TYN I+ G
Sbjct: 672 PNTTTYNAILKG 683



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 180/368 (48%), Gaps = 7/368 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG-PKPNVVTFSTLINAFCKEAKLEK 266
           G  P++V  N ++  LC  G+  +  SL + + +    +PN VT++ LI+ F K    ++
Sbjct: 352 GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDR 411

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A +L+  M E  + P++I  + L+DGL K GR+    E       +GLK +   +++++ 
Sbjct: 412 AHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALIS 471

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A+ G+ ++ RA+Q ++ ML+ G  P+ + Y  LI GLC  GR+ +A  +  ++ +     
Sbjct: 472 AFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSL 531

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN--GLMGD---ALRFF 441
               Y+ LI GFCK  KL   + L   M + G+KPD +  + LI+  G  GD   A +  
Sbjct: 532 DRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVM 591

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM-GMYNIKPDVITHTVLIRGIAS 500
            + ++  L P++  +  ++   C  K   + +K+F  M     + P+ + + +LI  +  
Sbjct: 592 EKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCR 651

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
              +  AI L   M  + + P+  TY+AI+ G+   K +     +   M      PD   
Sbjct: 652 NNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYIT 711

Query: 561 YNVLLNML 568
             VL   L
Sbjct: 712 MEVLTEWL 719



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/485 (23%), Positives = 221/485 (45%), Gaps = 27/485 (5%)

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAM--RGKGFCVY-EFLMNGLLRKGVI---ENAFH 199
           SP L   L+  L+ S   G    +   M     GF V  E +   L+R G          
Sbjct: 173 SPQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFPDGEVVG 232

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +  ++ +RG  P+     +++ +LC + + G A  +   ++ +G   +  + + L+    
Sbjct: 233 LVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLG 292

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR------- 312
           +   +++  +L   M +  + P ++ + IL++ L KA R+ E     L   DR       
Sbjct: 293 RGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEA----LQVFDRLRGKGGS 348

Query: 313 ---GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF-LPNVISYSILIKGLCQQGR 368
              G++ DVV+F++++D    +G     +   + M  G    PN ++Y+ LI G  + G 
Sbjct: 349 NWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGN 408

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
              A  LF Q+    ++P+++T ++L+DG CK G++      ++ M  +GLK +A   + 
Sbjct: 409 FDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTA 468

Query: 429 LINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LI+   G      A++ F + +     P+  ++ +L+ G C   R  D   +   + +  
Sbjct: 469 LISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAG 528

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
              D   + VLI G   +  L     L  +M + G+ PD ITY+ +I  L K  + +   
Sbjct: 529 FSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATAS 588

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL-TDRGLEPDIITYNTIICG 602
            + + M + G+ P +  Y  +++    + N+D  +K+FG++ +   + P+ + YN +I  
Sbjct: 589 KVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDA 648

Query: 603 YCSLN 607
            C  N
Sbjct: 649 LCRNN 653



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 194/445 (43%), Gaps = 48/445 (10%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG----IYLSPDLVQRLMSCL 157
           R  R S+  FG     L+ +  +  +IDE++++F  +   G    + + PD+V  L + L
Sbjct: 310 RKIRPSVVTFG----ILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVV--LFNTL 363

Query: 158 VDS-NSVGQYY---KLCRAMR-----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           +D    VG+      L   M+           Y  L++G  + G  + A  + RQ+ + G
Sbjct: 364 IDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEG 423

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN++T N ++  LC +G++  A   F+ +   G K N  T++ LI+AFC    + +A 
Sbjct: 424 VQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAM 483

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           Q +  M+     PD ++Y  LI GL  AGR+ + + ++      G  LD   ++ ++  +
Sbjct: 484 QCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGF 543

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
                + R  +    M   G  P+ I+Y+ LI  L + G    A  +  +++   L PS+
Sbjct: 544 CKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSV 603

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT 448
           +TY ++I  +C    + +G  ++  M      P                           
Sbjct: 604 VTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVP--------------------------- 636

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
             PN  I+N L+D  CR       + L   M +  ++P+  T+  +++G+  +  L  A 
Sbjct: 637 --PNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAF 694

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGL 533
            L  +M++    PD IT   +   L
Sbjct: 695 ELMDRMVEEACRPDYITMEVLTEWL 719



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 221/496 (44%), Gaps = 26/496 (5%)

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YYKLCRAMRGKGFCVYEFLMN 186
           S+  F   +   + L+P     L+ CL ++  V      + +L  + +    C    L+ 
Sbjct: 125 SLHRFRKSTHPTLPLTPKSASLLLQCLENARLVNDSLLLFNQLDPSSKSPQLC--HGLLR 182

Query: 187 GLLRKGVIENAFHMHRQVIQ--RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
            LL+ G   +A H+  ++ Q   GF    VT   +   L  +G+      +  ++  +G 
Sbjct: 183 VLLKSGRAGDALHVLDEMPQANSGFS---VTGEIVFGELVRSGRSFPDGEVVGLVAKLGE 239

Query: 245 K---PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +   P+    + L+   C + K   A+++ + +M +    D    + L+  L +   +K 
Sbjct: 240 RGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKR 299

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG------FLPNVIS 355
            NELL     R ++  VV F  +++       +  A+Q +DR+   G        P+V+ 
Sbjct: 300 MNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVL 359

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRL-EPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           ++ LI GLC+ G+  +   L  ++ +  +  P+ +TY+ LIDGF K+G       L+  M
Sbjct: 360 FNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQM 419

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            + G++P+ +  + L++GL     +  A+ FF +     L  N   +  L+   C +   
Sbjct: 420 NEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNI 479

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              ++ F  M      PD + +  LI G+   G ++ A ++  ++   G + D   Y+ +
Sbjct: 480 NRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVL 539

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  K K +     +   ME  GV PD   YN L++ L K  +   A K+  ++   GL
Sbjct: 540 ISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGL 599

Query: 590 EPDIITYNTIICGYCS 605
            P ++TY  II  YCS
Sbjct: 600 RPSVVTYGAIIHAYCS 615



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 20/294 (6%)

Query: 332 GDVGRAVQTYDRM--LNGGFLPNVISYSILIKGLCQQGRLV---EACGLFGQVLIRRLEP 386
           G  G A+   D M   N GF    ++  I+   L + GR     E  GL  ++  R + P
Sbjct: 188 GRAGDALHVLDEMPQANSGF---SVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFP 244

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN--GLMGDALR---FF 441
                + L+   C   K    + +   +++ G   DA  C+ L+   G   D  R     
Sbjct: 245 DGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELL 304

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF-MLMG-----MYNIKPDVITHTVLI 495
            +  +  + P++  F  L++  C+ +R  + +++F  L G        ++PDV+    LI
Sbjct: 305 AEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLI 364

Query: 496 RGIASQGSLSSAILLFFQMLKRGLT-PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
            G+   G     + L  +M    +  P+ +TY+ +I G FK  N      +F+ M   GV
Sbjct: 365 DGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGV 424

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            P++   N L++ L K   +  A++ F ++  +GL+ +  TY  +I  +C +N+
Sbjct: 425 QPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 31/178 (17%)

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + V L   +G   + PD    T L+  +        A  +   +++ G   D  + +A++
Sbjct: 229 EVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALL 288

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG-- 588
             L +G++I     +   ME+  + P +  + +L+N L K   +D AL++F +L  +G  
Sbjct: 289 TWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGS 348

Query: 589 ----LEPDIITYNTIICGYCSLN-------------------------SCLIDGYFKS 617
               +EPD++ +NT+I G C +                          +CLIDG+FK+
Sbjct: 349 NWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKA 406



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 10/199 (5%)

Query: 110 DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYY 167
           D  C Y+ LI  + +  K++   E+   M + G+   PD +    L+S L  +       
Sbjct: 532 DRSC-YNVLISGFCKKKKLERVYELLTEMEETGV--KPDTITYNTLISYLGKTGDFATAS 588

Query: 168 KLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP-NIVTCNKILKR 222
           K+   M  +G       Y  +++    K  ++    +  ++     VP N V  N ++  
Sbjct: 589 KVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDA 648

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC N  +  A SL + + +   +PN  T++ ++     +  L KAF+L + M+E    PD
Sbjct: 649 LCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPD 708

Query: 283 LIIYSILIDGLFKAGRLKE 301
            I   +L + L   G +++
Sbjct: 709 YITMEVLTEWLSAVGEIEK 727


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 235/495 (47%), Gaps = 9/495 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI    +  ++ E+V++   M   G+       + L+     +  +    ++   M 
Sbjct: 235 YNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMA 294

Query: 175 GKGFCVYE----FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF   E    F+++GL +KG +E AF +  Q+ +   VPNI   N +L  +C NG   
Sbjct: 295 RLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFS 354

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L + +   G +PN VT++ LI++ CK   ++ A  + + M E  +   +  Y+ LI
Sbjct: 355 EADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLI 414

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +   K   L      L   ++ GL  +   +S V+      GD+  AV+ + +M   G  
Sbjct: 415 NCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVA 474

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            N  +++ LI G C+  ++ EA  LF ++    LEP+ +T++++I+G+C  G +R  F L
Sbjct: 475 WNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQL 534

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           YD M+ RGL PD      LI+GL        A  F         + N F    L+ G CR
Sbjct: 535 YDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCR 594

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             R T+   ++  M M+  K D+I+ T+++     Q     + +LF +M ++G+ PD + 
Sbjct: 595 EGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVF 654

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           ++ +I+   K  N+   L+ +  M  +G  P+   Y  L+N L K  +L +A  L  ++ 
Sbjct: 655 HTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEML 714

Query: 586 DRGLEPDIITYNTII 600
                P+  T+N  +
Sbjct: 715 ASHFLPNSYTFNCFL 729



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 229/501 (45%), Gaps = 18/501 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI +  + G +D+++ +   M + G+ ++      L++C    + +         M 
Sbjct: 375 YAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMV 434

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  ++ GL RKG +  A  +HR++ ++G   N  T   ++   C   ++ 
Sbjct: 435 EIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMD 494

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS LF+ +     +PN VTF+ +I  +C    + KAFQLY+ MM   L PD   Y  LI
Sbjct: 495 EASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLI 554

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL       +  E +    +    L+    ++++  +   G +  A   ++ M   G  
Sbjct: 555 SGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGK 614

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            ++IS++I++    +Q    ++C LF ++  + + P  + ++ +I+ + K G +    + 
Sbjct: 615 LDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNC 674

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +D MI  G  P+ V  + L+N L     +  A     + +    +PN + FN  +D    
Sbjct: 675 WDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFAT 734

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                    L+  M +     ++++   LI+G    G +  AI L  +  + G  PD I+
Sbjct: 735 EGNLETAKDLYFAM-LQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCIS 793

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL----DAALKLF 581
           YS +IH L K  +I+  + ++  M   GV PDI  YN+    LI+ CN+    D  L ++
Sbjct: 794 YSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNI----LIRWCNIHGESDKCLGIY 849

Query: 582 GQLTDRGLEPDIITYNTIICG 602
             +  +G++P+  T+  +  G
Sbjct: 850 IDMVKKGVQPNWHTHRALFVG 870



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 213/423 (50%), Gaps = 18/423 (4%)

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           +  G  P+  T ++IL  L    Q   A  LFD +L  G   +   ++  I A+C+   L
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           + A  L   M +       + Y++LI GL K  R++E  ++  + L RG+  D V   ++
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTL 273

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +  +    ++  A++    M   GF+P+  + S ++ GL ++GR+ EA  L  Q+   R+
Sbjct: 274 VYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRM 333

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDAL- 438
            P++  Y++L++  CK+G   +   L + M  +GL+P+ V  ++LI+     G+M DAL 
Sbjct: 334 VPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALC 393

Query: 439 ---RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
              R   + VRMT+ P    +N+L++ CC+       +     M    + P+  +++ +I
Sbjct: 394 MLDRMREKGVRMTVYP----YNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVI 449

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G+  +G LS A+ L  +M ++G+  +  T++A+I+G  K K +     +F  M  + + 
Sbjct: 450 AGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLE 509

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
           P+   +N ++       ++  A +L+ Q+  RGL PD  TY ++I G      CL DG  
Sbjct: 510 PNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGL-----CLTDGAS 564

Query: 616 KSQ 618
           K++
Sbjct: 565 KAK 567



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 175/373 (46%), Gaps = 40/373 (10%)

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           +L +   + PD    S ++  L K  +      L    L  G+ LD  V+++ + AY  +
Sbjct: 151 HLSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEV 210

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
            ++  A     RM + G   + + Y++LI GLC+  R+ EA  +   +L R +    +T 
Sbjct: 211 RNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTC 270

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
            +L+ GFC++ +L     +  +M + G  P    CS +++GL     + +A R   Q   
Sbjct: 271 RTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGE 330

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
           + ++PN+F +N L++  C+    ++  +L   M    ++P+ +T+ +LI  +  +G +  
Sbjct: 331 LRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDD 390

Query: 507 AILLFFQMLKR-----------------------------------GLTPDVITYSAIIH 531
           A+ +  +M ++                                   GLTP+  +YS +I 
Sbjct: 391 ALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIA 450

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL +  ++S  + + + M   GVA +   +  L+N   K   +D A +LF ++T+  LEP
Sbjct: 451 GLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEP 510

Query: 592 DIITYNTIICGYC 604
           + +T+N +I GYC
Sbjct: 511 NEVTFNAVIEGYC 523



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 209/473 (44%), Gaps = 23/473 (4%)

Query: 69  QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKI 128
            LI+   + D  D+A     +MV + G T N               YS +I    R G +
Sbjct: 412 SLINCCCKKDDLDMAMGFLSEMV-EIGLTPN------------AASYSPVIAGLCRKGDL 458

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGL 188
             +VE+   M++ G+  +      L++    +  + +  +L   M        E   N +
Sbjct: 459 SGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAV 518

Query: 189 LRK----GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           +      G I  AF ++ Q++ RG  P+  T   ++  LC+      A      L     
Sbjct: 519 IEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCS 578

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
             N  + + L++ FC+E +L +A+ ++N M       DLI ++I++    K    ++   
Sbjct: 579 VLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCV 638

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           L     ++G++ D V  + +++ Y   G++ +A+  +D M+  G LPN ++Y+ L+  LC
Sbjct: 639 LFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLC 698

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           +   L  A  L  ++L     P+  T++  +D F   G L     LY  M++ G   + V
Sbjct: 699 KSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFLANIV 757

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + LI G      + +A+    +S      P+   ++T++   C+     + ++L+  M
Sbjct: 758 SVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEM 817

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
               +KPD++ + +LIR     G     + ++  M+K+G+ P+  T+ A+  G
Sbjct: 818 LYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 245/522 (46%), Gaps = 35/522 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+   +R  ++     I + M   G Y S  +   L+     S      YKL + M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 175 G----KGFCVYEFLMNG------LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                 G+ VY  L+ G      L    V+E A   + +++    V N V  + + + LC
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   A S+   ++  G  P+  T+S +I   C  +K++ AF L+  M    +VPD+ 
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ILID   K G L++  +     +  G   +VV +++++ AY+    +  A + ++ M
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL------------------IRRLEP 386
           L+ G +PNV++Y+ LI G C+ G++ +AC ++ ++                   IR  +P
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR--DP 634

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           ++ TY +L+DG CK+ K+++   L D M   G +P+ +V   LI+G      + +A   F
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +       PN++ +++L+D   + KR    +K+   M   +  P+VI +T +I G+   
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A  L   M ++G  P+V+TY+A+I G  K   +   L + + M   G AP+   Y
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            VL+N       LD A +L  ++        +  Y  +I G+
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 208/450 (46%), Gaps = 58/450 (12%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G  E A+ + R+++ +GF+P+  T +K++  LC   ++ NA  LF+ +      P+V T+
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + LI++FCK   L++A + ++ M+     P+++ Y+ LI    KA ++   NEL    L 
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP----------------NVIS 355
            G   +VV +++++D +   G + +A Q Y RM     +P                N+ +
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFT 638

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  L+ GLC+  ++ EA  L   + +   EP+ + Y +LIDGFCK GKL +   ++  M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 416 KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +RG  P+    S LI+ L  D     AL+   + +  +  PN+ I+  ++DG C++ +  
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 471 DTVKLFMLM-----------------------------------GMYNIKPDVITHTVLI 495
           +  +L  +M                                   G     P+ +T+ VLI
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
               + G L  A  L  +M +      +  Y  +I G  +   IS+GL     +  N   
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGL--LDEIAENVAV 876

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           P I  Y +L++   K   L+ AL+L  +++
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEMS 906



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 153/625 (24%), Positives = 267/625 (42%), Gaps = 74/625 (11%)

Query: 46  NNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFR 105
            NP   ++FF W    +   +   + H LL+     +     D++  QF       R  R
Sbjct: 140 KNPELGVKFFIWAGRQIGYGHTGPVYHALLEV----LGCGGNDRVPEQF------LREIR 189

Query: 106 DSLGD-FGCDYSFLIENYVRIGKIDESVEIFAYMSDMG-------------IYLSPD--- 148
           D   +  G   + LI    R G  + ++E    + D+G             ++L  D   
Sbjct: 190 DEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLD 249

Query: 149 ---LVQRLMSCL---VDSNSVGQY-YKLCRAMRGK-------------GFCVYEFLMNGL 188
              LV R MS     +D  ++G + + LC+A R +                +Y  +++GL
Sbjct: 250 TAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGL 309

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
               + E A     ++     +PN+VT   +L       Q+G    +  +++  G  P+ 
Sbjct: 310 CEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSR 369

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
             F++LI+A+C+      A++L   M +    P  ++Y+ILI G+    +L   + L L 
Sbjct: 370 RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELA 429

Query: 309 A------LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
                  LD  + L+ V  S++     G G   +A      M++ GF+P+  +YS +I  
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC   ++  A  LF ++    + P + TY+ LID FCK G L+     +D M++ G  P+
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + LI+       M  A   F   +    IPN+  +  L+DG C+  +     +++ 
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609

Query: 478 LM---------GMY------NIK-PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
            M          MY      NI+ P++ T+  L+ G+     +  A  L   M   G  P
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           + I Y A+I G  K   +     +F  M   G  P++  Y+ L++ L K+  LD ALK+ 
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVL 729

Query: 582 GQLTDRGLEPDIITYNTIICGYCSL 606
            ++ +    P++I Y  +I G C +
Sbjct: 730 SRMLENSCAPNVIIYTEMIDGLCKV 754



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 133/607 (21%), Positives = 251/607 (41%), Gaps = 110/607 (18%)

Query: 83  ASHVFDKMVIQFGKTYNFFRLFR--DSLGDFGCDYSFLIENYVRIGKI------------ 128
           +  +F+ ++  + ++ ++   ++    +GD GC   +++ N + IG I            
Sbjct: 368 SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN-ILIGGICGNEKLPSLDVL 426

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--------- 179
           + + + +  M D  + L+   V  L  CL  +    + Y + R M  KGF          
Sbjct: 427 ELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKV 486

Query: 180 ------------------------------VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
                                          Y  L++   + G+++ A     ++++ G 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PN+VT   ++       ++ +A+ LF+++L  G  PNVVT++ LI+  CK  ++EKA Q
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 270 LYNLMM------EMDLV----------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +Y  M       ++D+           P++  Y  L+DGL KA ++KE  +LL      G
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            + + +V+ +++D +  +G +  A   + +M   G+ PNV +YS LI  L +  RL  A 
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +  ++L     P+++ Y+ +IDG CK GK  + + L   M ++G  P+ V  + +I+G 
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM------- 481
                +   L    Q       PN   +  L++ CC      D  +L   M         
Sbjct: 787 GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846

Query: 482 ---------YNIK-----------------PDVITHTVLIRGIASQGSLSSAILLFFQM- 514
                    +N +                 P +  + +LI      G L  A+ L  +M 
Sbjct: 847 AGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMS 906

Query: 515 -LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
                   D   YS++I  L     +     ++  M + G  P+++I+  L+  LI+   
Sbjct: 907 SCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966

Query: 574 LDAALKL 580
            + AL+L
Sbjct: 967 WEEALQL 973


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 222/432 (51%), Gaps = 8/432 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  LM  L    + + A  + R +   G   ++VT   +++ LC   ++  A  L   + 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G +PNVV +S+L+  +CK  + E   +++  M E  + PD+++Y+ LID L K G+ K
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           + + ++   + RGL+ +VV ++ +++     G V  A+    +M   G  P+V++Y+ LI
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 361 KGLCQQGRLVEACGLFGQVLIRR--LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           KGL     + EA  L  +++  +  ++P+++T++S+I G C  G++R  F +   M + G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 419 LKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
              + V  +LLI GL+       A+    +   + L P+ F ++ L+ G C++ +     
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAE 417

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M    I+P++  +  L+  +  QG +  A  LF +M       DV+ YS +IHG 
Sbjct: 418 DLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGA 476

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K  ++     + K +   G+ PD   Y++++NM  K  +++AA  +  Q+T  G  PD+
Sbjct: 477 CKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDV 536

Query: 594 ITYNTIICGYCS 605
             ++++I GY +
Sbjct: 537 AVFDSLIQGYST 548



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 221/451 (49%), Gaps = 12/451 (2%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           LM  L       Q   L R+MR  G       Y  L+ GL     ++ A  +  ++ + G
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN+V  + +L+  C +G+  +   +F  +   G +P+VV ++ LI++ CK  K +KA 
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            + ++M+   L P+++ Y++LI+ + K G +KE   +L    ++G+  DVV +++++   
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300

Query: 329 VGIGDVGRAVQTYDRMLNGGFL--PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
             + ++  A+   + M+ G  +  PNV++++ +I+GLC  GR+ +A  +   +       
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFF 442
           +L+TY+ LI G  +  K+R    L D M   GL+PD+   S+LI G       D      
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL 420

Query: 443 QSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            ++R   I P LF +  L+   C          LF  M   N   DV+ ++ +I G    
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKA 479

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G L +A  L   ++  GLTPD +TYS +I+   K  ++     + K M  +G  PD+A++
Sbjct: 480 GDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVF 539

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           + L+     +  ++  L+L  ++  + +  D
Sbjct: 540 DSLIQGYSTKGEINKVLELIREMITKNIALD 570



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 220/456 (48%), Gaps = 20/456 (4%)

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFL 184
           D++V +   M   G+         L+  L D+  V +  +L   M   G      VY  L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           + G  + G  E+   +  ++ ++G  P++V    ++  LC  G+   A  + D+++  G 
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +PNVVT++ LIN  CKE  +++A  +   M E  + PD++ Y+ LI GL     + E   
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM- 310

Query: 305 LLLTALDRG---LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
            LL  + RG   +K +VV F+SV+     IG + +A Q    M   G + N+++Y++LI 
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           GL +  ++ +A  L  ++    LEP   TYS LI GFCK  ++     L   M  RG++P
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEP 430

Query: 422 D-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDTV 473
           +      ++ ++   G+M  A R  F  +      ++  ++T++ G C+   LK A + +
Sbjct: 431 ELFHYIPLLVAMCEQGMMERA-RNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELL 489

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           K  +  G   + PD +T++++I   A  G + +A  +  QM   G  PDV  + ++I G 
Sbjct: 490 KSIVDEG---LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGY 546

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
                I+  L + + M    +A D  I + L   L+
Sbjct: 547 STKGEINKVLELIREMITKNIALDSKIISTLSTSLV 582



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 196/406 (48%), Gaps = 42/406 (10%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           +RG        N+ L+ L     +G A+SL D L  V    + V+++T++ A C+    +
Sbjct: 42  RRGRAEAAACLNRHLRLL----PLGEATSLLDALPSV---RDAVSYNTVLTALCRRGHHD 94

Query: 266 KAFQLYNLM-MEMDLV--PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +A  L   M +E      P+ + Y++L+  L       +   LL +    G++ DVV + 
Sbjct: 95  RAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYG 154

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++       +V +AV+    M   G  PNV+ YS L++G C+ GR  +   +F ++  +
Sbjct: 155 TLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK 214

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
            +EP ++ Y+ LID  CK GK +    + D M++RGL+P                     
Sbjct: 215 GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP--------------------- 253

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                    N+  +N L++  C+     + + +   M    + PDV+T+  LI+G++   
Sbjct: 254 ---------NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVL 304

Query: 503 SLSSAILLFFQML--KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            +  A+ L  +M+  K  + P+V+T++++I GL     +     +  +ME  G   ++  
Sbjct: 305 EMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVT 364

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           YN+L+  L++   +  A++L  ++T  GLEPD  TY+ +I G+C +
Sbjct: 365 YNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKM 410



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 179/380 (47%), Gaps = 39/380 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI++  ++GK  ++  +   M   G  L P++V                        
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRG--LEPNVV------------------------ 256

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+N + ++G ++ A  + +++ ++G  P++VT N ++K L    ++  A  
Sbjct: 257 -----TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 235 LFDVLLLVGP--KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
           L + ++      KPNVVTF+++I   C   ++ +AFQ+  +M E   + +L+ Y++LI G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L +  ++++  EL+      GL+ D   +S ++  +  +  V RA      M + G  P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +  Y  L+  +C+QG +  A  LF + +       ++ YS++I G CK+G L+    L  
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 413 NMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           +++  GL PDAV  S++IN     G M  A     Q      +P++ +F++L+ G     
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKG 550

Query: 468 RATDTVKLFMLMGMYNIKPD 487
                ++L   M   NI  D
Sbjct: 551 EINKVLELIREMITKNIALD 570



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 2/159 (1%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           PN   +  LM   C  + A   V L   M    ++ DV+T+  LIRG+     +  A+ L
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
             +M + G+ P+V+ YS+++ G  K G+   VG  +F  M   G+ PD+ +Y  L++ L 
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVG-KVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           K      A  +   +  RGLEP+++TYN +I   C   S
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGS 270



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 98/224 (43%), Gaps = 33/224 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+ + ++ ++D + ++ + M D GI   P+L                         
Sbjct: 400 YSILIKGFCKMWQVDRAEDLLSTMRDRGI--EPELFH----------------------- 434

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+  +  +G++E A ++  + +   F  ++V  + ++   C  G +  A  
Sbjct: 435 ------YIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKE 487

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   ++  G  P+ VT+S +IN F K   +E A  +   M     +PD+ ++  LI G  
Sbjct: 488 LLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             G + +  EL+   + + + LD  + S++  + V   + G+A+
Sbjct: 548 TKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNE-GKAL 590


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 222/427 (51%), Gaps = 16/427 (3%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC-----VY 181
           + D    + A     GI  +  +   L+  L   N V     L + +  +  C     +Y
Sbjct: 122 RTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMY 181

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +MNGL +KG  + AF + R + Q    PN    + ++   C +G +  A+SL + +  
Sbjct: 182 GTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQ 241

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
               P++ T+STLI+A CK ++ E    L+  M+ +++ P++  ++ +IDGL K G++++
Sbjct: 242 KSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVED 301

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             E++   +++G+  DV+ ++ ++D Y   G V RA + +D M+N    PN+ISY+ILI 
Sbjct: 302 AEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILIN 361

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G  +Q ++ EA  +  ++  + L+PS++T + L+ G  + G+ +   + +D M+  G  P
Sbjct: 362 GYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP 421

Query: 422 DAVV-CSLL----INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC---RLKRATDTV 473
           D    C+LL     NGL+ +A+  F +  R     N+ I+  ++DG C   +L +A  T 
Sbjct: 422 DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATF 481

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +   L+G++   PDVIT+T +I G   +G L  A  +  +M   G   D  TY+ I+ G 
Sbjct: 482 EKLPLIGLH---PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538

Query: 534 FKGKNIS 540
            +   +S
Sbjct: 539 LRSNKVS 545



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 222/453 (49%), Gaps = 41/453 (9%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD------------VLLL 241
           +++AF + RQ+++   +P++V+ +K+LK L       +  SLF             +L +
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 242 V-----------------------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           V                       G   N V F+TL+     E K++ A  L+  ++  +
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 279 LV-PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           +  P+ ++Y  +++GL K G  ++  +LL        K +  ++S V+DA+   G +  A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
               + M      P++ +YS LI  LC+  +      LF +++   + P++ T++S+IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMG--DALRFFFQS-VRMTLIPN 452
            CK GK+ D   +   MI++G+ PD +  +++I+G  L G  D  R  F S +  ++ PN
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  +N L++G  R K+  + +++   +    +KP ++T  VL+ G+   G   SA   F 
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +ML  G  PD+ T+  ++ G FK   +   +  F  +ER     +I IY  +++ L K  
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNG 472

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            LD A   F +L   GL PD+ITY  +I GYC 
Sbjct: 473 KLDKAHATFEKLPLIGLHPDVITYTAMISGYCQ 505



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 240/514 (46%), Gaps = 25/514 (4%)

Query: 109 GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK 168
           G+FG    F  EN   +  +D++  +F  M       S     +L+  LV          
Sbjct: 39  GNFGVSNEF--EN---VKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVS 93

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVI---------QRGFVPNIVTCNKI 219
           L R +      V+EF+++      V+ +   MHR  +         ++G   N V  N +
Sbjct: 94  LFREIHKLRIPVHEFILSI-----VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTL 148

Query: 220 LKRLCINGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           L+ L    ++ +A  LF  L+     +PN V + T++N  CK+   +KAF L  LM +  
Sbjct: 149 LRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS 208

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             P+  IYSI+ID   K G L     LL     + +  D+  +S+++DA   +       
Sbjct: 209 TKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVR 268

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             +  M++    PNV +++ +I GLC++G++ +A  +   ++ + ++P ++TY+ +IDG+
Sbjct: 269 TLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY 328

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
              G++     ++D+MI + ++P+ +  ++LING      + +A++   +  +  L P++
Sbjct: 329 GLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSI 388

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
              N L+ G   L R       F  M      PD+ TH  L+ G    G +  A+  F +
Sbjct: 389 VTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHK 448

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           + +R    ++  Y+A+I GL K   +      F+ +   G+ PD+  Y  +++   +E  
Sbjct: 449 LERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGL 508

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           LD A  +  ++ D G   D  TYN I+ G+   N
Sbjct: 509 LDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSN 542


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 255/534 (47%), Gaps = 18/534 (3%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           R+  + +      Y+ L+    +  ++ E+VE+   M ++G+       + L+       
Sbjct: 223 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 282

Query: 162 SVGQYYKLCRAMRGKGFCVYE----FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            +    ++   M   GF   E    F+++ L +K ++E AF +  ++   G VPN+   N
Sbjct: 283 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++ +LC N +  +A  LF  +   G +PN VT++ LI+A CK   +E A  L++ M + 
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            +   +  Y+ LI+G  K G L     LL   +  GL      +S ++      GD+   
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 462

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++ +  M   G   N  +++ LI G C+  ++ EA  LF +++   + P+ +T++ +I+G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
           +C  G +R  F LYD M++ GLKPD      LI+GL     +  A  F         + N
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLN 582

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
            F    L+ G  R  R T+T  L+  M +  +K D+++ T+++     Q     + +LF 
Sbjct: 583 NFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFR 642

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M ++G+ PD I Y+ +I  L K +N+   L+ +  M  +G +P+   + VL+N L K  
Sbjct: 643 EMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSG 702

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCS---------LNSCLIDGYFKS 617
            L +A  L  ++    + P+  TYN  +  + +         L+S ++ G+  S
Sbjct: 703 YLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS 756



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 248/521 (47%), Gaps = 28/521 (5%)

Query: 102 RLFRDSLG----DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           RLF++  G         Y+ LI    + G I++++ +F  M D GI ++      L++  
Sbjct: 359 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418

Query: 158 VDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
               S+ +   L   M  +G       Y  L+ GL R G + +   +HR++ +RG   N 
Sbjct: 419 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 478

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T   ++   C + ++  A+ LFD ++     PN VTF+ +I  +C    + KAFQLY+ 
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M+EM L PD   Y  LI GL     + + NE +    +    L+    ++++  +   G 
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 598

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
                  +D M   G   +++S++I++    +Q    ++C LF ++  + ++P  + Y+ 
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMT 448
           +ID   K   +    + +D M+  G  P+ V  ++LIN     G +G A     + +   
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 449 LIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           ++PN F +N  +D       +++A D +   ML G       +++  +LI+G+   G + 
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHL---ASIVSFNILIKGLCKAGKIQ 774

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            AI L  ++ + G +PD I+YS IIH L K  +I+    ++  M   G+ PD+  YN+  
Sbjct: 775 EAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI-- 832

Query: 566 NMLIKECNL----DAALKLFGQLTDRGLEPDIITYNTIICG 602
              I+ CN+    D AL ++  +   G++P+  TY  ++ G
Sbjct: 833 --FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 216/467 (46%), Gaps = 41/467 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++ L +    ++A  + +++  RG  PN VT   ++  LC  G I +A  LFD +
Sbjct: 340 AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKM 399

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G K  V  +++LIN +CK+  L++A  L + M++  L P    YS LI GL + G L
Sbjct: 400 RDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDL 459

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               EL     +RG+  +   F+++++ +     +  A + +D+M++   +PN ++++++
Sbjct: 460 SSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVM 519

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC-------------------- 399
           I+G C  G + +A  L+ Q++   L+P   TY SLI G C                    
Sbjct: 520 IEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYA 579

Query: 400 ---------------KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR----- 439
                          + G+  + + L+D M  RG+K D V  ++++   +    +     
Sbjct: 580 VLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F +     + P+   +  ++D   + +     +  +  M +    P+ +THTVLI  + 
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 699

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G L SA LL  +ML   + P+  TY+  +       ++     +   M +  +A  I 
Sbjct: 700 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIV 758

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +N+L+  L K   +  A+ L  ++T+ G  PD I+Y+TII   C +
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKM 805



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 201/405 (49%), Gaps = 5/405 (1%)

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           +  G   N  T ++IL  L    Q   A  LFD +L  G   +   ++  I A+C+   L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           + A  L   M    +    + Y++L+ GL K  R++E  E+    ++ G+  D V + ++
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +  +  + ++  A++    M+  GF+P+  + S +I  L ++  + EA  L  ++    +
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALR 439
            P++  Y++LID  CK+ +  D   L+  M  RGL+P+ V  ++LI+     G++ DAL 
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F +     +   ++ +N+L++G C+         L   M    + P   +++ LI G+ 
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G LSS + L  +M +RG+  +  T++A+I+G  K K +     +F  M  + V P+  
Sbjct: 455 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 514

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +NV++       N+  A +L+ Q+ + GL+PD  TY ++I G C
Sbjct: 515 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 189/408 (46%), Gaps = 35/408 (8%)

Query: 70  LIHVLLQSDMRDVASHVFDKM----VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRI 125
           LI+   +    D A+ +FDKM    VI    T+N                  +IE Y  +
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV-----------------MIEGYCLV 526

Query: 126 GKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
           G I ++ +++  M +MG  L PD    + L+S L  ++ V +  +    +      +  F
Sbjct: 527 GNIRKAFQLYDQMVEMG--LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF 584

Query: 184 ----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
               L+ G  R+G     +H+  ++  RG   ++V+   I+           +  LF  +
Sbjct: 585 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KP+ + ++ +I+A  KE  + +A   ++ M+     P+ + +++LI+ L K+G L
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYL 704

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L    L   +  +   ++  +D +   GD+ +A   +  ML G  L +++S++IL
Sbjct: 705 GSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG-HLASIVSFNIL 763

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKGLC+ G++ EA  L  ++      P  ++YS++I   CK G +   F L++ M+ +GL
Sbjct: 764 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           KPD V  ++ I     +G    AL  +   +R  + PN   +  L+ G
Sbjct: 824 KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 49/99 (49%)

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF +ML+ G+  D   Y+A I    + +N+     +   ME  GV      YNVL+  L 
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLC 244

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           K   +  A+++   + + G+  D +TY T++ G+C +  
Sbjct: 245 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 213/434 (49%), Gaps = 6/434 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L++    KG + +A     ++   G  P+ VT N +L   C  G +G A +L   +
Sbjct: 211 TFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARM 270

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P   T++TL++A+ +   +++A  +   M      PDL  Y++L  GL +AG++
Sbjct: 271 KKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 330

Query: 300 KEGNELLLTALDRGL-KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            E  +L       G+   DVV +++++DA         A+   + M   G   ++++++I
Sbjct: 331 DEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNI 390

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           ++KGLC++G+L EA G    +    L P ++TY++LID  CK+G +   F L D M++ G
Sbjct: 391 IVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG 450

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           LK D    + L+  L       +A        +   +P+   + T+M    +  +    +
Sbjct: 451 LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPAL 510

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L+  M    + P + T+  LI+G+++ G L+ AI    ++++ GL PD  TY+ IIH  
Sbjct: 511 CLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAY 570

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K  ++         M  N   PD+   N L+N L     L+ A+KLF    ++G + D+
Sbjct: 571 CKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDV 630

Query: 594 ITYNTIICGYCSLN 607
           ITYNT+I   C  N
Sbjct: 631 ITYNTLIQALCKDN 644



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 231/486 (47%), Gaps = 14/486 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ L+  +   G + +++   + M   G  LSPD V    L++       +G+   L   
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFG--LSPDAVTYNTLLNAHCRKGMLGEARTLLAR 269

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ +G       Y  L++   R G I+ A  +   +   GF P++ T N +   LC  G+
Sbjct: 270 MKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 329

Query: 229 IGNASSLFDVLLLVG-PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +  A  L D +  +G   P+VVT++TL++A  K  +   A  L   M E  +   L+ ++
Sbjct: 330 VDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHN 389

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I++ GL + G+L+E    L    + GL  DV+ +++++DA    G+V +A    D M+  
Sbjct: 390 IIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRS 449

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G   +  + + L+  LC++ R  EA  L      R   P  ++Y +++  + K  K    
Sbjct: 450 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPA 509

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL--MG---DALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+D MIKR L P     + LI GL  MG   +A+    + + M L+P+   +N ++  
Sbjct: 510 LCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHA 569

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+        +    M   + KPDV+T   L+ G+   G L  A+ LF   +++G   D
Sbjct: 570 YCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVD 629

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           VITY+ +I  L K  ++   L  F  ME  G+ PD+  YNVLL+ L +      A K+  
Sbjct: 630 VITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLH 689

Query: 583 QLTDRG 588
           +L + G
Sbjct: 690 KLNESG 695



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 212/470 (45%), Gaps = 52/470 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLC 170
           Y+ L     + GK+DE+ ++   M  +GI +SPD+V    + LVD+            L 
Sbjct: 317 YNVLAAGLCQAGKVDEAFKLKDEMEQLGI-VSPDVVT--YNTLVDACFKCQRSSDALNLL 373

Query: 171 RAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             MR KG       +  ++ GL R+G +E A      + + G  P+++T N ++   C  
Sbjct: 374 EEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKA 433

Query: 227 GQIGNASSLFDVLLLVGPK-----------------------------------PNVVTF 251
           G +  A  L D ++  G K                                   P+ V++
Sbjct: 434 GNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSY 493

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
            T++ A+ KE K E A  L++ M++  L P +  Y+ LI GL   G+L E  + L   ++
Sbjct: 494 GTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELME 553

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            GL  D   ++ ++ AY   GD+ +A Q +++M+   F P+V++ + L+ GLC  GRL +
Sbjct: 554 MGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEK 613

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  LF   + +  +  ++TY++LI   CK   +      + +M  RGL+PD    ++L++
Sbjct: 614 AMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLS 673

Query: 432 GLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK- 485
            L       +A +   +      +   F + ++      ++   D      +  + N + 
Sbjct: 674 ALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQG 733

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
            D  ++   I+ +   G L  A  +  +M+++G++ D  TY  ++ GL K
Sbjct: 734 DDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 176/412 (42%), Gaps = 71/412 (17%)

Query: 199 HMHRQVI----QRGFV-PNIVTCNKILKRLCINGQIGNASSL--FDVLLLVGPKPNVVTF 251
           H+  Q++    +RG V P++   N +L  L  +      +SL  F  L+ +   PN  TF
Sbjct: 153 HLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTF 212

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + L++  C +  L  A    + M    L PD                             
Sbjct: 213 NLLVHTHCSKGTLADALSTLSKMQGFGLSPD----------------------------- 243

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
                  V ++++++A+   G +G A     RM   G +P   +Y+ L+    + G + +
Sbjct: 244 ------AVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQ 297

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  +   +     EP L TY+ L  G C++GK+ + F L D M + G+            
Sbjct: 298 ATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGI------------ 345

Query: 432 GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
                            + P++  +NTL+D C + +R++D + L   M    +K  ++TH
Sbjct: 346 -----------------VSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTH 388

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            ++++G+  +G L  A+     M + GLTPDVITY+ +I    K  N++    +   M R
Sbjct: 389 NIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVR 448

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           +G+  D    N LL  L KE   + A +L      RG  PD ++Y T++  Y
Sbjct: 449 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAY 500



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 139/291 (47%), Gaps = 34/291 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+    +GK+ E+++    + +MG  L PD                          
Sbjct: 528 YNTLIKGLSTMGKLTEAIDKLNELMEMG--LVPDDT------------------------ 561

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  +++   ++G +E AF  H ++++  F P++VTCN ++  LC+ G++  A  
Sbjct: 562 -----TYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMK 616

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LF+  +  G K +V+T++TLI A CK+  ++ A + +  M    L PD+  Y++L+  L 
Sbjct: 617 LFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALS 676

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP--N 352
           +AGR  E  ++L   L+   KL    F   + + V   + G+  +    + + G     +
Sbjct: 677 EAGRSVEAQKML-HKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDD 735

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
             SY+  IK LC  G+L EA  +  +++ + +     TY +L++G  K  K
Sbjct: 736 QESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 3/175 (1%)

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           +L  F   + + L PN + FN L+   C      D +     M  + + PD +T+  L+ 
Sbjct: 193 SLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLN 252

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
               +G L  A  L  +M K G+ P   TY+ ++    +   I     + + M   G  P
Sbjct: 253 AHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEP 312

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL-EPDIITYNTII--CGYCSLNS 608
           D+  YNVL   L +   +D A KL  ++   G+  PD++TYNT++  C  C  +S
Sbjct: 313 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSS 367


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 261/565 (46%), Gaps = 108/565 (19%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++  I  + + GK++E++E+F+ M + G+   P++V                        
Sbjct: 255 FTTAINAFCKGGKVEEAIELFSKMEEAGVV--PNVV------------------------ 288

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  +++GL   G  + AF    ++++RG  P ++T + ++K L    +IG+A  
Sbjct: 289 -----TYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYC 343

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +   G  PNV+ ++ LI++  +   L KA ++ +LM+   L      Y+ LI G  
Sbjct: 344 VLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 403

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVM---------DA---YVGI----------- 331
           K+G+      LL   L  G  ++   F+SV+         D+   +VG            
Sbjct: 404 KSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGG 463

Query: 332 ------------GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
                       G   +AV+ + + LN GFL +  + + L+ GLC+ G+L E   +  ++
Sbjct: 464 LLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEI 523

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG---- 435
           L R      ++Y++LI G C + KL + F   D M+K+GLKPD    S+LI GL+     
Sbjct: 524 LGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKV 583

Query: 436 -DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF----------------ML 478
            +A++F+    R  +IP+++ ++ ++DGCC+ +R  +  KLF                 L
Sbjct: 584 EEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHL 643

Query: 479 MGMY-------------------NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +G Y                    I P+  T+T LI+G++    +  A LL  +M   GL
Sbjct: 644 IGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGL 703

Query: 520 TPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
            P+V  Y+A+I G  K G+ + V   + + M    V P+   Y V++    ++ N+  A 
Sbjct: 704 EPNVFHYTALIDGYGKLGQMVKVEC-LLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 762

Query: 579 KLFGQLTDRGLEPDIITYNTIICGY 603
           +L  ++ ++G+ PD ITY   I GY
Sbjct: 763 RLLHEMREKGIVPDSITYKEFIYGY 787



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 239/500 (47%), Gaps = 17/500 (3%)

Query: 117 FLIENYVRIGKIDE---SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
            LIE Y    K D    ++++F  +++ G++ S      L++ LV +    ++ K C A 
Sbjct: 185 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRAT---EFQKCCEAF 241

Query: 174 ----RGKGFCVYEFL--MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
               +G    VY F   +N   + G +E A  +  ++ + G VPN+VT N ++  L ++G
Sbjct: 242 HVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSG 301

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A    + ++  G +P ++T+S L+    K  ++  A+ +   M E    P++I+Y+
Sbjct: 302 RYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYN 361

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LID L +AG L +  E+    + +GL L    +++++  Y   G    A +    ML+ 
Sbjct: 362 NLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSI 421

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GF  N  S++ +I  LC       A    G++L+R + P     ++LI G CK GK    
Sbjct: 422 GFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 481

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+   + +G   D    + L++GL     + +  R   + +    + +   +NTL+ G
Sbjct: 482 VELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISG 541

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           CC  K+  +       M    +KPD  T+++LIRG+ +   +  AI  +    + G+ PD
Sbjct: 542 CCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPD 601

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TYS +I G  K +    G  +F  M  N + P+  +YN L+    +   L  AL+L  
Sbjct: 602 VYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELRE 661

Query: 583 QLTDRGLEPDIITYNTIICG 602
            +  +G+ P+  TY ++I G
Sbjct: 662 DMKHKGISPNSATYTSLIKG 681



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 208/438 (47%), Gaps = 41/438 (9%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G  P+  TCN +L  L    +       F V+   G  P+V  F+T INAFCK  K+E+
Sbjct: 212 KGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVC-KGVSPDVYLFTTAINAFCKGGKVEE 270

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A +L++ M E  +VP+++ Y+ +IDGL  +GR  E        ++RG++  ++ +S ++ 
Sbjct: 271 AIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVK 330

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                  +G A      M   GF PNVI Y+ LI  L + G L +A  +   ++ + L  
Sbjct: 331 GLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSL 390

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFF 441
           +  TY++LI G+CKSG+      L   M+  G   +     +V+C L  + +   ALRF 
Sbjct: 391 TSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFV 450

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM-----------------LMGM--- 481
            + +   + P   +  TL+ G C+  + +  V+L++                 L G+   
Sbjct: 451 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEA 510

Query: 482 ------YNIKPDV---------ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                 + I+ ++         +++  LI G      L  A +   +M+K+GL PD  TY
Sbjct: 511 GKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTY 570

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           S +I GL     +   +  +   +RNG+ PD+  Y+V+++   K    +   KLF ++  
Sbjct: 571 SILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMS 630

Query: 587 RGLEPDIITYNTIICGYC 604
             L+P+ + YN +I  YC
Sbjct: 631 NNLQPNTVVYNHLIGAYC 648



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 186/384 (48%), Gaps = 12/384 (3%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  +F VL   G  P+  T + L+ +  +  + +K  + ++++ +  + PD+ +++  I+
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK-GVSPDVYLFTTAIN 260

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY---DRMLNGG 348
              K G+++E  EL     + G+  +VV +++V+D   G+G  GR  + +   ++M+  G
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVID---GLGMSGRYDEAFMFKEKMVERG 317

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P +I+YSIL+KGL +  R+ +A  +  ++  +   P+++ Y++LID   ++G L    
Sbjct: 318 VEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAI 377

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            + D M+ +GL   +   + LI G         A R   + + +    N   F +++   
Sbjct: 378 EIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLL 437

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C        ++    M + N+ P     T LI G+   G  S A+ L+ + L +G   D 
Sbjct: 438 CSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDT 497

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            T +A++HGL +   +  G  + K +   G   D   YN L++       LD A     +
Sbjct: 498 KTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDE 557

Query: 584 LTDRGLEPDIITYNTIICGYCSLN 607
           +  +GL+PD  TY+ +I G  ++N
Sbjct: 558 MVKKGLKPDNYTYSILIRGLLNMN 581



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 116/220 (52%), Gaps = 11/220 (5%)

Query: 394 LIDGFCKSGKLRDG----FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRF-----FFQS 444
           LI+ +C   K RDG      ++  +  +G+ P    C++L+  L+  A  F      F  
Sbjct: 186 LIEVYCTQFK-RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLV-RATEFQKCCEAFHV 243

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           V   + P++++F T ++  C+  +  + ++LF  M    + P+V+T+  +I G+   G  
Sbjct: 244 VCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRY 303

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A +   +M++RG+ P +ITYS ++ GL K K I     + K M   G  P++ +YN L
Sbjct: 304 DEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNL 363

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           ++ LI+  +L+ A+++   +  +GL     TYNT+I GYC
Sbjct: 364 IDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 403



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 12/237 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM----SCLVDSNSVGQYYKLC 170
           YS LI   + + K++E+++ +      G+   PD+    +     C  +    GQ  KL 
Sbjct: 570 YSILIRGLLNMNKVEEAIQFWGDCKRNGMI--PDVYTYSVMIDGCCKAERTEEGQ--KLF 625

Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M          VY  L+    R G +  A  +   +  +G  PN  T   ++K + I 
Sbjct: 626 DEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 685

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            ++  A  L + + + G +PNV  ++ LI+ + K  ++ K   L   M   ++ P+ I Y
Sbjct: 686 SRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 745

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           +++I G  + G + E + LL    ++G+  D + +   +  Y+  G V +A +  D 
Sbjct: 746 TVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 245/522 (46%), Gaps = 35/522 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+   +R  ++     I + M   G Y S  +   L+     S      YKL + M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 175 G----KGFCVYEFLMNG------LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                 G+ VY  L+ G      L    V+E A   + +++    V N V  + + + LC
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   A S+   ++  G  P+  T+S +I   C  +K++ AF L+  M    +VPD+ 
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ILID   K G L++  +     +  G   +VV +++++ AY+    +  A + ++ M
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL------------------IRRLEP 386
           L+ G +PNV++Y+ LI G C+ G++ +AC ++ ++                   IR  +P
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR--DP 634

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           ++ TY +L+DG CK+ K+++   L D M   G +P+ +V   LI+G      + +A   F
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +       PN++ +++L+D   + KR    +K+   M   +  P+VI +T +I G+   
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A  L   M ++G  P+V+TY+A+I G  K   +   L + + M   G AP+   Y
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            VL+N       LD A +L  ++        +  Y  +I G+
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 208/450 (46%), Gaps = 58/450 (12%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G  E A+ + R+++ +GF+P+  T +K++  LC   ++ NA  LF+ +      P+V T+
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + LI++FCK   L++A + ++ M+     P+++ Y+ LI    KA ++   NEL    L 
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP----------------NVIS 355
            G   +VV +++++D +   G + +A Q Y RM     +P                N+ +
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFT 638

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  L+ GLC+  ++ EA  L   + +   EP+ + Y +LIDGFCK GKL +   ++  M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 416 KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +RG  P+    S LI+ L  D     AL+   + +  +  PN+ I+  ++DG C++ +  
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 471 DTVKLFMLM-----------------------------------GMYNIKPDVITHTVLI 495
           +  +L  +M                                   G     P+ +T+ VLI
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
               + G L  A  L  +M +      +  Y  +I G  +   IS+GL     +  N   
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGL--LDEIAENVAV 876

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           P I  Y +L++   K   L+ AL+L  +++
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEMS 906



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 153/625 (24%), Positives = 267/625 (42%), Gaps = 74/625 (11%)

Query: 46  NNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFR 105
            NP   ++FF W    +   +   + H LL+     +     D++  QF       R  R
Sbjct: 140 KNPELGVKFFIWAGRQIGYGHTGPVYHALLEV----LGCGGNDRVPEQF------LREIR 189

Query: 106 DSLGD-FGCDYSFLIENYVRIGKIDESVEIFAYMSDMG-------------IYLSPD--- 148
           D   +  G   + LI    R G  + ++E    + D+G             ++L  D   
Sbjct: 190 DEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLD 249

Query: 149 ---LVQRLMSCL---VDSNSVGQY-YKLCRAMRGK-------------GFCVYEFLMNGL 188
              LV R MS     +D  ++G + + LC+A R +                +Y  +++GL
Sbjct: 250 TAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGL 309

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
               + E A     ++     +PN+VT   +L       Q+G    +  +++  G  P+ 
Sbjct: 310 CEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSR 369

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
             F++LI+A+C+      A++L   M +    P  ++Y+ILI G+    +L   + L L 
Sbjct: 370 RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELA 429

Query: 309 A------LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
                  LD  + L+ V  S++     G G   +A      M++ GF+P+  +YS +I  
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC   ++  A  LF ++    + P + TY+ LID FCK G L+     +D M++ G  P+
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + LI+       M  A   F   +    IPN+  +  L+DG C+  +     +++ 
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609

Query: 478 LM---------GMY------NIK-PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
            M          MY      NI+ P++ T+  L+ G+     +  A  L   M   G  P
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           + I Y A+I G  K   +     +F  M   G  P++  Y+ L++ L K+  LD ALK+ 
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVL 729

Query: 582 GQLTDRGLEPDIITYNTIICGYCSL 606
            ++ +    P++I Y  +I G C +
Sbjct: 730 SRMLENSCAPNVIIYTEMIDGLCKV 754



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 134/607 (22%), Positives = 250/607 (41%), Gaps = 110/607 (18%)

Query: 83  ASHVFDKMVIQFGKT--YNFFRLFRDSLGDFGCDYSFLIENYVRIGKI------------ 128
           +  +F+ ++  + ++  Y++       +GD GC   +++ N + IG I            
Sbjct: 368 SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN-ILIGGICGNEKLPSLDVL 426

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--------- 179
           + + + +  M D  + L+   V  L  CL  +    + Y + R M  KGF          
Sbjct: 427 ELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKV 486

Query: 180 ------------------------------VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
                                          Y  L++   + G+++ A     ++++ G 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PN+VT   ++       ++ +A+ LF+++L  G  PNVVT++ LI+  CK  ++EKA Q
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 270 LYNLMM------EMDLV----------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +Y  M       ++D+           P++  Y  L+DGL KA ++KE  +LL      G
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            + + +V+ +++D +  +G +  A   + +M   G+ PNV +YS LI  L +  RL  A 
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +  ++L     P+++ Y+ +IDG CK GK  + + L   M ++G  P+ V  + +I+G 
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM------- 481
                +   L    Q       PN   +  L++ CC      D  +L   M         
Sbjct: 787 GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846

Query: 482 ---------YNIK-----------------PDVITHTVLIRGIASQGSLSSAILLFFQM- 514
                    +N +                 P +  + +LI      G L  A+ L  +M 
Sbjct: 847 AGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMS 906

Query: 515 -LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
                   D   YS++I  L     +     ++  M + G  P+++I+  L+  LI+   
Sbjct: 907 SCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966

Query: 574 LDAALKL 580
            + AL+L
Sbjct: 967 WEEALQL 973


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 214/433 (49%), Gaps = 12/433 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQR----GFVPNIVTCNKILKRLCINGQIGN---ASSLF 236
           L++  L   VI    H+  Q+  +     F PN++TCN +L  L  +    +   +  +F
Sbjct: 140 LLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVF 199

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
              + +G +PNV TF+ LI+ +C +   E+A +L N M E    PD + Y+ ++  L K 
Sbjct: 200 QDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKR 259

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
            +L +  +LLL   + GL  +   ++ ++  Y  +  +  A +  + M   G LP+V +Y
Sbjct: 260 SQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTY 319

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + +++GLC +G++ EA  L  ++   +L P ++TY++LIDG  +       F L + M  
Sbjct: 320 NTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKA 379

Query: 417 RGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           RG+K + V  +++I      G + +A     + V     P+ F +NT+++G C+  +  +
Sbjct: 380 RGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAE 439

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             K+   MG   +K D  T   L+  +  +  L  A  L  +  KRG   D +TY  +I 
Sbjct: 440 AYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIM 499

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G FK +     L +++ M+  G+   I  YN ++  L      D A+    +L ++GL P
Sbjct: 500 GYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVP 559

Query: 592 DIITYNTIICGYC 604
           D  T N II GYC
Sbjct: 560 DESTSNIIIHGYC 572



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 208/430 (48%), Gaps = 5/430 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L++G       E A  +  Q+ + G  P+ VT N +L  LC   Q+     L   +
Sbjct: 213 TFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQM 272

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  PN  T++ L++ +CK   L++A ++  LM    ++PD+  Y+ ++ GL   G++
Sbjct: 273 KNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKI 332

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   L        L  DVV +++++D          A +  + M   G   N ++++I+
Sbjct: 333 DEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIM 392

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IK  C +G++ EA  +  +++     P   TY+++I+G+CK+GK+ + + + D M ++GL
Sbjct: 393 IKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGL 452

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           K D    + L++ +     + DA     ++ +   I +   + TL+ G  + ++A   +K
Sbjct: 453 KLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALK 512

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L+  M    I   +IT+  +IRG+   G    A+    ++L++GL PD  T + IIHG  
Sbjct: 513 LWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYC 572

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +         M  + + PDI   N+LL  L +E  L+  L LF     +G   D +
Sbjct: 573 WEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTV 632

Query: 595 TYNTIICGYC 604
           TYN II  +C
Sbjct: 633 TYNIIISSFC 642



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 140/592 (23%), Positives = 266/592 (44%), Gaps = 34/592 (5%)

Query: 28  SDLQFNQANAILANLIKTNNPTPAIQ-FFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHV 86
           S  +F+ A ++L N I +++P  ++      + + +  P +   +   + S    +   +
Sbjct: 101 SRRKFSDAKSLLLNFISSDHPHHSLHAHLLRSDHTIPKPLLDTSLAAYVISKQPHLGHQI 160

Query: 87  FDKMVIQFGKTYNFFRL-FRDSLGDFGCDYSFLIENYVRIGKIDE---SVEIFAYMSDMG 142
           F+KM           RL FR +L    C+   L+   VR         S E+F     +G
Sbjct: 161 FNKMK----------RLRFRPNL--LTCNT--LLNALVRSNSSHSLVFSREVFQDAVKLG 206

Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAF 198
           +  + +    L+      N+  +  +L   M   G C     Y  ++  L ++  +    
Sbjct: 207 VQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVR 266

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
            +  Q+   G  PN  T N ++   C    +  A+ + +++   G  P+V T++T++   
Sbjct: 267 DLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGL 326

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C E K+++A +L + M    LVPD++ Y+ LIDG F+        +L+     RG+K + 
Sbjct: 327 CDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENG 386

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           V  + ++  +   G +  A     +M+  GF P+  +Y+ +I G C+ G++ EA  +  +
Sbjct: 387 VTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDE 446

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-- 436
           +  + L+    T ++L+   C   +L D ++L     KRG   D V    LI G   D  
Sbjct: 447 MGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQ 506

Query: 437 ---ALRFFFQSVRMTLIPNLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVIT 490
              AL+ + +     ++  +  +NT++ G C   +  +A D +   +  G+    PD  T
Sbjct: 507 ADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLV---PDEST 563

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
             ++I G   +G++  A     +M++  L PD+ T + ++ GL +   +  GL +F    
Sbjct: 564 SNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWI 623

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             G   D   YN++++   KE  L+ A  L  ++  + LEPD  TYN I+ G
Sbjct: 624 SKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTG 675



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/476 (23%), Positives = 215/476 (45%), Gaps = 20/476 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+  Y ++  + E+ E+   M+  G+         ++  L D   + +  +L   M 
Sbjct: 284 YNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKME 343

Query: 175 G----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L++G       + AF +  ++  RG   N VT N ++K  C  G+I 
Sbjct: 344 SFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKID 403

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS++   ++  G  P+  T++T+IN +CK  K+ +A+++ + M    L  D    + L+
Sbjct: 404 EASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLL 463

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             +    +L +   L + A  RG  LD V + +++  Y       RA++ ++ M   G +
Sbjct: 464 HTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIV 523

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
             +I+Y+ +I+GLC  G+  +A     ++L + L P   T + +I G+C  G +   F  
Sbjct: 524 ATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQF 583

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++ M++  LKPD   C++L+ GL     +   L  F   +      +   +N ++   C+
Sbjct: 584 HNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCK 643

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG------- 518
            +R  D   L   M   N++PD  T+  ++ G+   G    A  L  +  ++G       
Sbjct: 644 ERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQD 703

Query: 519 LTPDVIT----YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
            +P++ T    YS  I  L         + +F+  E+ GV+ +   Y  L++ L+K
Sbjct: 704 TSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/523 (22%), Positives = 239/523 (45%), Gaps = 27/523 (5%)

Query: 106 DSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           + +G++GC      Y+ ++    +  ++ +  ++   M + G++ + +    L+      
Sbjct: 235 NQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKL 294

Query: 161 NSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
             + +  ++   M GKG       Y  ++ GL  +G I+ A  +  ++     VP++VT 
Sbjct: 295 KWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTY 354

Query: 217 NKILKRLCINGQIGNAS-SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
           N ++   C   +  +A+  L + +   G K N VT + +I  FC E K+++A  +   M+
Sbjct: 355 NTLIDG-CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMV 413

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           E    PD   Y+ +I+G  KAG++ E  +++     +GLKLD    ++++        + 
Sbjct: 414 ESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLD 473

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A     +    G++ + ++Y  LI G  +  +   A  L+ ++    +  +++TY+++I
Sbjct: 474 DAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTII 533

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLI 450
            G C SGK        + ++++GL PD    +++I+G   +     A +F  + V  +L 
Sbjct: 534 RGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLK 593

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P++F  N L+ G CR       + LF          D +T+ ++I     +  L  A  L
Sbjct: 594 PDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDL 653

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMER------NGVAPDIA---- 559
             +M  + L PD  TY+AI+ GL K G+         K  E+         +P++     
Sbjct: 654 MTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDM 713

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +Y+  ++ L  +     A+KLF Q   +G+  +  TY  ++ G
Sbjct: 714 MYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDG 756



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/419 (22%), Positives = 175/419 (41%), Gaps = 82/419 (19%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G  ++ +I+ +   GKIDE+  +   M + G   SPD       C               
Sbjct: 386 GVTHNIMIKWFCTEGKIDEASNVMVKMVESG--FSPD-------CFT------------- 423

Query: 172 AMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
                    Y  ++NG  + G +  A+ M  ++ ++G   +  T N +L  +C+  Q+ +
Sbjct: 424 ---------YNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDD 474

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A +L       G   + VT+ TLI  + K+ + ++A +L+  M E  +V  +I Y+ +I 
Sbjct: 475 AYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIR 534

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL  +G+  +  + L   L++GL  D    + ++  Y   G V +A Q +++M+     P
Sbjct: 535 GLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKP 594

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           ++ + +IL++GLC++G L +   LF   + +      +TY+ +I  FCK  +L D F L 
Sbjct: 595 DIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLM 654

Query: 412 DNMIKRGLKPD------------------------------------------------- 422
             M  + L+PD                                                 
Sbjct: 655 TEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMM 714

Query: 423 --AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
               + SL   G   DA++ F Q+ +  +  N + +  LMDG  + +++  T  L   M
Sbjct: 715 YSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFM 773



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 114/239 (47%), Gaps = 8/239 (3%)

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD---GFSLYDNMIKRGLKPDAVVCSLLIN 431
           +F ++   R  P+LLT ++L++   +S           ++ + +K G++P+    ++LI+
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219

Query: 432 GLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           G   D     ALR   Q       P+   +NT++   C+  + T    L + M    + P
Sbjct: 220 GYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFP 279

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +  T+ +L+ G      L  A  +   M  +G+ PDV TY+ ++ GL     I   + + 
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             ME   + PD+  YN L++   +    DAA KL  ++  RG++ + +T+N +I  +C+
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 3/136 (2%)

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL---LFFQMLKRGLTPDVITYSAII 530
           ++F  M     +P+++T   L+  +    S  S +    +F   +K G+ P+V T++ +I
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           HG     N    L +   M   G  PD   YN +L  L K   L     L  Q+ + GL 
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 591 PDIITYNTIICGYCSL 606
           P+  TYN ++ GYC L
Sbjct: 279 PNRNTYNILVHGYCKL 294



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA---ALKLFGQLTDRGLEPD 592
            K   +G  +F  M+R    P++   N LLN L++  +  +   + ++F      G++P+
Sbjct: 151 SKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPN 210

Query: 593 IITYNTIICGYCSLNS 608
           + T+N +I GYCS N+
Sbjct: 211 VNTFNILIHGYCSDNN 226


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 241/492 (48%), Gaps = 43/492 (8%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+  L  SN + +  +L   M+  G      +Y  L++G  +      AF    ++++  
Sbjct: 16  LLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH 75

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
            +P +VT   I+  LC  G+  +A  L D +   G  PN+ T++ ++   C+E KL++A 
Sbjct: 76  CLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAK 135

Query: 269 QL---------------YN-----------------LMMEMDLVPDLIIYSILIDGLFKA 296
           ++               YN                  +  M + PD++ Y+ +I+GL K+
Sbjct: 136 KMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKS 195

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G L   + +L    +RG   DVV +SS++D +   G+V RA+   D ML  G  PN+++Y
Sbjct: 196 GDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAY 255

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + L+  L + G + +A  +  ++  R   P +++Y++ IDG CK+ +++   +++D M++
Sbjct: 256 NSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVE 315

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           RG  P+A   S+L+  L     + DA+    Q+     I ++ ++  L+DG C+  R  +
Sbjct: 316 RGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDE 375

Query: 472 TVKLFMLMGMYNI-KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              LF  +    I +PDV  + V++     +  +  A+ +  QML+R    +V+T++ ++
Sbjct: 376 ACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILV 434

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           HGL     +S    M   M   G  PD   Y  L++ + K     AAL+LF +    G  
Sbjct: 435 HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCV 494

Query: 591 PDIITYNTIICG 602
           PD++TY+ +I G
Sbjct: 495 PDVVTYSALITG 506



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 250/501 (49%), Gaps = 27/501 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ +++   + G+  ++V++   M D G   SP++     ++  L +   + +  K+   
Sbjct: 83  YTNIVDGLCKAGRTKDAVKLLDEMRDKGC--SPNIYTYNVIVEGLCEERKLDEAKKMLEE 140

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCING 227
           M  +G+      Y   + GL +   ++ A    R+ + R    P++V+   ++  LC +G
Sbjct: 141 MAVRGYFPDVVTYNSFIKGLCKCDRVDEA----RKFLARMPVTPDVVSYTTVINGLCKSG 196

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            + +AS + D +   G  P+VVT+S+LI+ FCK  ++E+A  L + M+++   P+++ Y+
Sbjct: 197 DLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYN 256

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+  L + G + +  ++L+    RG   DVV +++ +D       V +A   +DRM+  
Sbjct: 257 SLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 316

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PN  SYS+L++ LC++  L +A  L  Q   +     +L Y+ L+DG CK G+  + 
Sbjct: 317 GCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEA 376

Query: 408 FSLYDNMIKRGL-KPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            +L+  ++   + +PD    +++++       +  AL+   Q +      N+  +N L+ 
Sbjct: 377 CALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVH 435

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C   R +D   + + M      PD +T+  L+  +   G  ++A+ LF + +K G  P
Sbjct: 436 GLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVP 495

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           DV+TYSA+I GL           +F  +       D+A++N ++    +  + D  LKLF
Sbjct: 496 DVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLF 548

Query: 582 GQLTDRGLEPDIITYNTIICG 602
            +L +  +EP+  T+   I G
Sbjct: 549 VELIESDVEPNARTFGKEISG 569



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 256/523 (48%), Gaps = 26/523 (4%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G+T +  +L  D + D GC      Y+ ++E      K+DE+ ++   M+  G +  P
Sbjct: 92  KAGRTKDAVKLL-DEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF--P 148

Query: 148 DLV--QRLMSCLVDSNSVGQYYK-LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQV 204
           D+V     +  L   + V +  K L R         Y  ++NGL + G +++A  M  Q+
Sbjct: 149 DVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQM 208

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
             RG  P++VT + ++   C  G++  A  L D +L +G +PN+V +++L+ A  +   +
Sbjct: 209 TNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHI 268

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
            KA  +   M      PD++ Y+  IDGL KA R+K+   +    ++RG   +   +S +
Sbjct: 269 GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML 328

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           ++      ++  A+   ++      + +++ Y++L+ GLC+ GR  EAC LF +VL  ++
Sbjct: 329 VEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI 388

Query: 385 -EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
            EP +  Y+ ++D  CK  ++     ++  M++R    + V  ++L++GL     + DA 
Sbjct: 389 CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAE 447

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
                 V    IP+   + TL+D  C+  ++   ++LF         PDV+T++ LI G+
Sbjct: 448 TMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGL 507

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
             +     A LLF ++       DV  ++A+I G  +  +  +GL +F  +  + V P+ 
Sbjct: 508 VHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNA 560

Query: 559 AIYNVLLN-MLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             +   ++  L+K  +L  A  LF +    G  PD+   NT+I
Sbjct: 561 RTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLI 603



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 202/408 (49%), Gaps = 9/408 (2%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +I +   P+  T   +L+ LC + Q+  A  L   +  +G  P+   ++ LI+ + K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
             +AF+    M++   +P ++ Y+ ++DGL KAGR K+  +LL    D+G   ++  ++ 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           +++       +  A +  + M   G+ P+V++Y+  IKGLC+  R+ EA     ++ +  
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT- 179

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
             P +++Y+++I+G CKSG L     + D M  RG  PD V  S LI+G      +  A+
Sbjct: 180 --PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
                 +++   PN+  +N+L+    RL        + + M      PDV+++   I G+
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                +  A  +F +M++RG TP+  +YS ++  L K K +   + + +         DI
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGL-EPDIITYNTIICGYCS 605
            +Y VLL+ L K    D A  LF ++ D  + EPD+  YN ++  +C 
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCK 405



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 229/542 (42%), Gaps = 70/542 (12%)

Query: 38  ILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQ- 93
           I+  L K      A++      +   SPNI     ++  L +    D A  + ++M ++ 
Sbjct: 86  IVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 145

Query: 94  -FGK--TYNFF-------------RLF--RDSLGDFGCDYSFLIENYVRIGKIDESVEIF 135
            F    TYN F             R F  R  +      Y+ +I    + G +D +  + 
Sbjct: 146 YFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRML 205

Query: 136 AYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLL 189
             M++ G   +PD+V    L+        V +   L  +M   G       Y  L+  L 
Sbjct: 206 DQMTNRGC--TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 263

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           R G I  A  M  ++ +RGF P++V+ N  +  LC   ++  A ++FD ++  G  PN  
Sbjct: 264 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 323

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           ++S L+   CK+ +L+ A  L     E   + D+++Y++L+DGL K GR  E   L    
Sbjct: 324 SYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKV 383

Query: 310 LDRGL-KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
           LD  + + DV  ++ ++D++     + +A+Q + +ML      NV++++IL+ GLC   R
Sbjct: 384 LDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDR 442

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           L +A  +   ++     P  +TY +L+D  CK GK      L++  +K G  PD V  S 
Sbjct: 443 LSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSA 502

Query: 429 LINGLM--------------------------------GD-ALRFFFQSVRMTLIPNLFI 455
           LI GL+                                GD  L+ F + +   + PN   
Sbjct: 503 LITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNART 562

Query: 456 FNTLMDGCCRLKRATDTVK---LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           F   + G  +L +A    K   LF         PD+     LI   A  G L  A  +F+
Sbjct: 563 FGKEISG--KLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFY 620

Query: 513 QM 514
            M
Sbjct: 621 SM 622



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 217/463 (46%), Gaps = 49/463 (10%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKM----- 90
           N+ +  L K +    A +F           +   +I+ L +S   D AS + D+M     
Sbjct: 154 NSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGC 213

Query: 91  ---VIQFGKTYNFF----RLFR-----DSLGDFGCD-----YSFLIENYVRIGKIDESVE 133
              V+ +    + F     + R     DS+   GC      Y+ L+    R+G I ++ +
Sbjct: 214 TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAED 273

Query: 134 IFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM------RG--KGFCVYEFLM 185
           +   M   G   +PD+V    +  +D     +  K  +A+      RG       Y  L+
Sbjct: 274 MLVEMERRG--FTPDVVS--YNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLV 329

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG-P 244
             L +K  +++A  +  Q  ++  + +I+    +L  LC  G+   A +LF  +L     
Sbjct: 330 EELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKIC 389

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +P+V  ++ ++++ CK  +++KA Q++  M+E +   +++ ++IL+ GL    RL +   
Sbjct: 390 EPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAET 448

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +LLT +D G   D V + +++DA    G    A++ ++  + GG +P+V++YS LI GL 
Sbjct: 449 MLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV 508

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
            +    EA  LF ++        +  ++++I G+ ++G    G  L+  +I+  ++P+A 
Sbjct: 509 HENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNAR 561

Query: 425 VCSLLINGLM------GDALRFFFQSVRMTLIPNLFIFNTLMD 461
                I+G +      G A   F ++V+    P+LF+ NTL+D
Sbjct: 562 TFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLID 604



 Score = 40.0 bits (92), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 8/165 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y  L++   + GK   ++E+F      G    PD+V    L++ LV  N   + Y L   
Sbjct: 465 YGTLVDAMCKCGKSAAALELFEEAVKGGCV--PDVVTYSALITGLVHENMAEEAYLLFTK 522

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK-ILKRLCINGQIGN 231
           +      ++  ++ G    G  +    +  ++I+    PN  T  K I  +L     +G 
Sbjct: 523 L---DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGK 579

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           A  LFD  +  G  P++   +TLI+ F K   LE+A +++  M +
Sbjct: 580 ARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 228/493 (46%), Gaps = 68/493 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I  YV+   +D S+  F  M D G     +    L++ +V S+S  Q+++     +
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 175 GK-GFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            K    VY F  ++ G    G IE +F +  ++ + GF                      
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGF---------------------- 194

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
                         PNVV ++TLI+  CK  ++EKA  L+  M +  LV +   Y++LI 
Sbjct: 195 -------------SPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIH 241

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GLFK G  K+G E+     + G+  ++  ++ VM+ +   G    A + +D M   G   
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSC 301

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N+++Y+ LI GLC++ +  EA  +  Q+    + P+L+TY++LIDGFC  GKL    SL 
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            ++  RGL P                              +L  +N L+ G C+    + 
Sbjct: 362 RDLKSRGLSP------------------------------SLVTYNILVSGFCKKGDTSG 391

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             K+   M    IKP  IT+T+LI   A   ++  AI L   M + GLTPDV TYS +IH
Sbjct: 392 AGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIH 451

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G      ++    +FKLM    + P+  IYN ++    KE +   AL+LF ++ ++ L P
Sbjct: 452 GFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPP 511

Query: 592 DIITYNTIICGYC 604
           ++ +Y  +I   C
Sbjct: 512 NVASYRYMIEVLC 524



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 214/436 (49%), Gaps = 45/436 (10%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +YE ++N  ++   ++++     +++ +GFVP                     S+ F+  
Sbjct: 96  LYEVMINAYVQSQSLDSSISYFNEMVDKGFVP--------------------GSNCFN-- 133

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS--ILIDGLFKAG 297
                  N++TF    ++F          Q +    E  +  DL +YS  I+I G  +AG
Sbjct: 134 -------NLLTFVVGSSSFN---------QWWRFFNESKIKVDLDVYSFGIVIKGCCEAG 177

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            +++  +LL+   + G   +VV++++++D     G++ +A   +  M   G + N  +Y+
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYT 237

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           +LI GL + G   +   ++ ++    + P+L TY+ +++  CK G+ +D F L+D M +R
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRER 297

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G+  + V  + LI GL       +A +   Q     + PNL  +NTL+DG C + +    
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           + L   +    + P ++T+ +L+ G   +G  S A  +  +M +RG+ P  ITY+ +I  
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDT 417

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
             +  N+   + +   ME  G+ PD+  Y+VL++    +  ++ A +LF  +  + LEP+
Sbjct: 418 FARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPN 477

Query: 593 IITYNTIICGYCSLNS 608
            + YNT++ GYC   S
Sbjct: 478 KVIYNTMVLGYCKEGS 493


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 219/464 (47%), Gaps = 38/464 (8%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C Y  L+ G    G   +AF M   + + G  P +VT N ++  LC  G++  A  LFD 
Sbjct: 254 CSYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDE 313

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG- 297
           +  VG + N +TF+ LI+ + K  ++++A   Y  M    LVPD   ++I+     K G 
Sbjct: 314 MAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGY 373

Query: 298 -------------------------------RLKEGNELLLTALDRGLKLDVVVFSSVMD 326
                                          RL +  ELLL A+++G+ L V  F++++ 
Sbjct: 374 AAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIA 433

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           AY   G    A + Y  M   G  P+  +++ LI GLC QGRL EA  L   ++ +    
Sbjct: 434 AYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCL 493

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           S  +++  +D + + G        +D+M   GL+ D +  S  INGL     + +A + F
Sbjct: 494 ST-SFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAF 552

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +     ++PN   +N+++   C+    T+ +KL   M    + PD+ T  +LI G+  +
Sbjct: 553 AEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCRE 612

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G L     L   M   GLTPD +TY+ II+   + ++++  ++    M   G  PDI  Y
Sbjct: 613 GKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTY 672

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           N+ ++ L +   L+ A KL  +L      P+ +TYNT++ G CS
Sbjct: 673 NIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGICS 716



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 117/498 (23%), Positives = 202/498 (40%), Gaps = 106/498 (21%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           +C     ++  L  G+   A  +  +V + G  P++   + +L+ L  +G++  A ++F+
Sbjct: 148 YCALRLALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFE 207

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +   GP+P++ TF+ ++  FC    +  A  L  +M +  + PD+  Y+ILI G     
Sbjct: 208 EMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGH---- 263

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
                                 VF    DA+          + ++ M   G  P V++Y+
Sbjct: 264 ---------------------CVFGWSRDAF----------KMFEGMHRSGCEPTVVTYN 292

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           IL+  LC +GR+ EA  LF ++    ++ + +T++ LIDG+ KSG++    + Y  M  R
Sbjct: 293 ILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQAR 352

Query: 418 GLKPDA-------------------------------------VVCSLLINGLMGDALRF 440
           GL PD+                                     +VC L  +  + DA   
Sbjct: 353 GLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWEL 412

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
              ++   +   +  FN L+    +     +  +L+ +M    + P   T   LI G+ +
Sbjct: 413 LLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCN 472

Query: 501 QGSLSSAILLFFQMLKR----------------------------------GLTPDVITY 526
           QG L  A LL   M+ +                                  GL  D I +
Sbjct: 473 QGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAF 532

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           SA I+GL +   ++     F  M   G+ P+   YN +++ L K  N+  ALKL   +  
Sbjct: 533 SAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQ 592

Query: 587 RGLEPDIITYNTIICGYC 604
            GL PDI T N +I G C
Sbjct: 593 SGLVPDIYTSNILIDGLC 610



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 157/320 (49%), Gaps = 4/320 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI  Y + G  +E+ E++  M+ +G+  S      L+  L +   + +   L   M 
Sbjct: 428 FNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMV 487

Query: 175 GKGFCV---YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            KG+C+   +   ++   R G    A      +   G   + +  +  +  LC    +  
Sbjct: 488 SKGYCLSTSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNE 547

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A   F  +   G  PN +T++++I+A CK   + +A +L   M +  LVPD+   +ILID
Sbjct: 548 AYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILID 607

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL + G+LK  + LLL     GL  D V ++++++AY    D+  A+   ++ML  G  P
Sbjct: 608 GLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEP 667

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           ++ +Y+I +  LC+   L +A  L  +++     P+ +TY++L+DG C S  L     L 
Sbjct: 668 DIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGIC-SDVLDRAMILT 726

Query: 412 DNMIKRGLKPDAVVCSLLIN 431
             +IK   KP+ +  ++ ++
Sbjct: 727 GRLIKMAFKPNTITLNVFLS 746



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 125/295 (42%), Gaps = 47/295 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +++LI      G++DE+  +  +M   G  LS      L +   D N+VG   K    M 
Sbjct: 463 FNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGAL-KCWDDMG 521

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G    F  +   +NGL R   +  A+    ++  RG VPN +T N I+  LC  G + 
Sbjct: 522 NIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMT 581

Query: 231 NASSLF-------------------------------DVLLL----VGPKPNVVTFSTLI 255
            A  L                                D LLL     G  P+ VT++T+I
Sbjct: 582 EALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTII 641

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL--LTALDRG 313
           NA+C+   +  A    N M+     PD+  Y+I +  L +   L +  +LL  L A+D  
Sbjct: 642 NAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVD-- 699

Query: 314 LKLDVVVFSSVMDAYVGIGDV-GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
              + V ++++MD      DV  RA+    R++   F PN I+ ++ +   C+QG
Sbjct: 700 CSPNSVTYNTLMDGICS--DVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQG 752



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 132/322 (40%), Gaps = 49/322 (15%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G+V  A   ++ M   G  P++ +++ ++ G C +G +  A GL G +    + P + +Y
Sbjct: 197 GEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSY 256

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVR 446
           + LI G C  G  RD F +++ M + G +P  V  ++L++     G M +A R F +  +
Sbjct: 257 NILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQ 316

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR-----GIASQ 501
           + +  N   FN L+DG  +  +       +  M    + PD  T  ++       G A+Q
Sbjct: 317 VGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQ 376

Query: 502 ---------------------------GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
                                        L  A  L    +++G+   V  ++A+I    
Sbjct: 377 LVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYS 436

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K         ++++M + G+AP  + +N L+  L  +  LD A  L   +  +G      
Sbjct: 437 KEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG------ 490

Query: 595 TYNTIICGYCSLNSCLIDGYFK 616
                 C   S   CL D YF+
Sbjct: 491 -----YCLSTSFTICL-DAYFR 506


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/652 (24%), Positives = 277/652 (42%), Gaps = 115/652 (17%)

Query: 51  AIQFFKWT--HNCVSSPNIAQLI----HVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLF 104
           A++F KW      + + +I QL+    H+L+++ M D A H+  ++ +  GK+   F   
Sbjct: 53  ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 112

Query: 105 RDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
             +      +   Y  LI  Y+R G I +S+EIF  M   G   S      ++  +V S 
Sbjct: 113 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS- 171

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
                        G+   V+ FL                 +++++R   P++ T N ++ 
Sbjct: 172 -------------GEDVSVWSFL-----------------KEMLKRKICPDVATFNILIN 201

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  G    +S L   +   G  P +VT++T+++ +CK+ + + A +L + M    +  
Sbjct: 202 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 261

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+  Y++LI  L ++ R+ +G  LL     R +  + V ++++++ +   G V  A Q  
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 321

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + ML+ G  PN ++++ LI G   +G   EA  +F  +  + L PS ++Y  L+DG CK+
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 381

Query: 402 GKL------------------------------RDGF-----SLYDNMIKRGLKPDAVVC 426
            +                               ++GF      L + M K G+ PD V  
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           S LING         A     +  R+ L PN  I++TL+  CCR+    + ++++  M +
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501

Query: 482 Y-----------------------------------NIKPDVITHTVLIRGIASQGSLSS 506
                                                I P+ ++   LI G  + G    
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +F +M K G  P   TY +++ GL KG ++       K +     A D  +YN LL 
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
            + K  NL  A+ LFG++  R + PD  TY ++I G C     +I   F  +
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 237/505 (46%), Gaps = 18/505 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA-- 172
           ++ LI+ ++  G   E++++F  M   G  L+P  V      L+D       + L R   
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKG--LTPSEVS--YGVLLDGLCKNAEFDLARGFY 391

Query: 173 --MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M+  G CV    Y  +++GL + G ++ A  +  ++ + G  P+IVT + ++   C  
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 451

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+   A  +   +  VG  PN + +STLI   C+   L++A ++Y  M+      D   +
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++L+  L KAG++ E  E +      G+  + V F  +++ Y   G+  +A   +D M  
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P   +Y  L+KGLC+ G L EA      +         + Y++L+   CKSG L  
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 631

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQS-VRMTLIPNLFIFNTLM 460
             SL+  M++R + PD+   + LI+GL        A+ F  ++  R  ++PN  ++   +
Sbjct: 632 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 691

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG  +  +    +     M      PD++T   +I G +  G +     L  +M  +   
Sbjct: 692 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 751

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P++ TY+ ++HG  K K++S    +++ +  NG+ PD    + L+  + +   L+  LK+
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811

Query: 581 FGQLTDRGLEPDIITYNTIICGYCS 605
                 RG+E D  T+N +I   C+
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCA 836



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 16/506 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  +   GK+  + ++   M   G  LSP+ V    L+   +   +  +  K+   
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFG--LSPNHVTFNALIDGHISEGNFKEALKMFYM 358

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  L++GL +    + A   + ++ + G     +T   ++  LC NG 
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L + +   G  P++VT+S LIN FCK  + + A ++   +  + L P+ IIYS 
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    + G LKE   +    +  G   D   F+ ++ +    G V  A +    M + G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LPN +S+  LI G    G  ++A  +F ++      P+  TY SL+ G CK G LR+  
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
               ++       D V+ + L+     +G +  A+  F + V+ +++P+ + + +L+ G 
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 464 CRLKRATDTVKLFM--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           CR K  T    LF        N+ P+ + +T  + G+   G   + I    QM   G TP
Sbjct: 659 CR-KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 717

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D++T +A+I G  +   I     +   M      P++  YN+LL+   K  ++  +  L+
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLN 607
             +   G+ PD +T ++++ G C  N
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESN 803



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 131/549 (23%), Positives = 239/549 (43%), Gaps = 45/549 (8%)

Query: 102  RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            R++R  L   G  YS LI N  R+G + E++ I+  M   G          L++ L  + 
Sbjct: 463  RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522

Query: 162  SVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
             V +  +  R M   G       ++ L+NG    G    AF +  ++ + G  P   T  
Sbjct: 523  KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582

Query: 218  KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
             +LK LC  G +  A      L  V    + V ++TL+ A CK   L KA  L+  M++ 
Sbjct: 583  SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642

Query: 278  DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL-DVVVFSSVMDAYVGIGDVGR 336
             ++PD   Y+ LI GL + G+          A  RG  L + V+++  +D     G    
Sbjct: 643  SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702

Query: 337  AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
             +   ++M N G  P++++ + +I G  + G++ +   L  ++  +   P+L TY+ L+ 
Sbjct: 703  GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762

Query: 397  GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIP 451
            G+ K   +   F LY ++I  G+ PD + C  L+ G     ++   L+     +   +  
Sbjct: 763  GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822

Query: 452  NLFIFNTLMDGCC---RLKRATDTVKLFMLMGM--------------------------- 481
            + + FN L+  CC    +  A D VK+   +G+                           
Sbjct: 823  DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882

Query: 482  -----YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
                   I P+   +  LI G+   G + +A ++  +M+   + P  +  SA++  L K 
Sbjct: 883  HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942

Query: 537  KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
                    + + M +  + P IA +  L+++  K  N+  AL+L   +++ GL+ D+++Y
Sbjct: 943  GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002

Query: 597  NTIICGYCS 605
            N +I G C+
Sbjct: 1003 NVLITGLCA 1011



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/433 (22%), Positives = 195/433 (45%), Gaps = 16/433 (3%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ L+    + G + ++V +F  M    I         L+S L             +   
Sbjct: 616  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675

Query: 175  GKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +G       +Y   ++G+ + G  +   +   Q+   G  P+IVT N ++      G+I
Sbjct: 676  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 230  GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
               + L   +      PN+ T++ L++ + K   +  +F LY  ++   ++PD +    L
Sbjct: 736  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 290  IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
            + G+ ++  L+ G ++L   + RG+++D   F+ ++      G++  A      M + G 
Sbjct: 796  VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855

Query: 350  LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
              +  +   ++  L +  R  E+  +  ++  + + P    Y  LI+G C+ G ++  F 
Sbjct: 856  SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915

Query: 410  LYDNMIKRGLKPDAVVCSLLINGLM--GDA------LRFFFQSVRMTLIPNLFIFNTLMD 461
            + + MI   + P  V  S ++  L   G A      LRF    ++M L+P +  F TLM 
Sbjct: 916  VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM---LKMKLVPTIASFTTLMH 972

Query: 462  GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             CC+     + ++L ++M    +K D++++ VLI G+ ++G ++ A  L+ +M   G   
Sbjct: 973  LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032

Query: 522  DVITYSAIIHGLF 534
            +  TY A+I GL 
Sbjct: 1033 NATTYKALIRGLL 1045



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/413 (20%), Positives = 171/413 (41%), Gaps = 51/413 (12%)

Query: 100  FFRLFRDSLGDFG--CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
            +FR   D+LG        + +I+ Y R+GKI+++ ++   M +                 
Sbjct: 705  YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN--------------- 749

Query: 158  VDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
                             G     Y  L++G  ++  +  +F ++R +I  G +P+ +TC+
Sbjct: 750  ----------------GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793

Query: 218  KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
             ++  +C +  +     +    +  G + +  TF+ LI+  C   ++  AF L  +M  +
Sbjct: 794  SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853

Query: 278  DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
             +  D      ++  L +  R +E   +L     +G+  +   +  +++    +GD+  A
Sbjct: 854  GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913

Query: 338  VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
                + M+     P  ++ S +++ L + G+  EA  L   +L  +L P++ ++++L+  
Sbjct: 914  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973

Query: 398  FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
             CK+G + +   L   M   GLK D V  ++LI GL     M  A   + +      + N
Sbjct: 974  CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033

Query: 453  LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
               +  L+ G   L R T                D+I   +L RG  +  SLS
Sbjct: 1034 ATTYKALIRGL--LARETAFS-----------GADIILKDLLARGFITSMSLS 1073



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 13/239 (5%)

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA-----LRF 440
           PS+  Y  LI  + + G ++D   ++  M   G  P    C+ ++  ++          F
Sbjct: 123 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             + ++  + P++  FN L++  C       +  L   M      P ++T+  ++     
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           +G   +AI L   M  +G+  DV TY+ +IH L +   I+ G  + + M +  + P+   
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           YN L+N    E  +  A +L  ++   GL P+ +T+N +I G+ S      +G FK  +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS------EGNFKEAL 353


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 268/542 (49%), Gaps = 28/542 (5%)

Query: 68  AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGK 127
           + ++ VL++    D A  + D+M++  GK  +                + L+  Y   G+
Sbjct: 259 SSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLA------------TMLMHGYCLHGE 306

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQR---LMSCLVDSNSVGQYYKLCRAMRGKGF--CVYE 182
           + +++++F  +   G+  +P  V     +  C  +  S  + YKLCR M  +G     YE
Sbjct: 307 VGKALDLFDEVVSDGV--TPTNVTYGVLIKGCDAEGMS-DETYKLCRQMIEQGLLLSTYE 363

Query: 183 F--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           F  ++ GLLR    ++A  +   V+  G VP++ T   ++  LC + ++  A +L+D + 
Sbjct: 364 FNLVIKGLLRDKRWKDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMK 422

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G KP++VT+ +L+  +C++ ++++A +LY+ M +    P+ + Y+ L+ G  K     
Sbjct: 423 EAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFD 482

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               LL      G+      ++ +++    +  V    +   R L+ GF+P  ++Y+ +I
Sbjct: 483 NAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSII 542

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G  + G +  A G++ Q+  + + P+++TY+S IDG+C++        L   + + G++
Sbjct: 543 NGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQ 602

Query: 421 PDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD    +  I+     G M  AL F    ++  L P++ ++N+ + G   LK   +  K 
Sbjct: 603 PDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKF 662

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           +  M    +  D   +T LI G +  G+++ A+ L+ +M+   + PD  T++A+ HGL +
Sbjct: 663 YYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCR 722

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
             +I     +   M R  V+P+I  YN+L+N  +++  L  A +L  ++   G+ PD  T
Sbjct: 723 SGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTT 782

Query: 596 YN 597
           Y+
Sbjct: 783 YD 784



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/513 (24%), Positives = 241/513 (46%), Gaps = 17/513 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMS-DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           YS +++  V++G++DE++ +   M    G  +   L   LM        VG+   L   +
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G       Y  L+ G   +G+ +  + + RQ+I++G + +    N ++K L  + + 
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A  L ++++  G  P+V T+  LI+  CK  KL +A  L++ M E  + P ++ Y  L
Sbjct: 378 KDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           + G  + GR+ E  +L     D+G   + V ++++M  Y+       A    + M   G 
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
                +Y+ILI GL    R+ E   +  + L     P+ +TY+S+I+GF K+G +   F 
Sbjct: 497 SCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFG 556

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           +Y  M K+G+ P+ V  +  I+G         A++      R  + P++  +N  +D  C
Sbjct: 557 MYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFC 616

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +    +  +   +L+    + PDV  +   + G  +   ++ A   ++ M+K+ +  D  
Sbjct: 617 KQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTE 676

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            Y+ +I G  K  N++  L ++  M  N V PD   +  L + L +  ++D A +L   +
Sbjct: 677 IYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDM 736

Query: 585 TDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
               + P+I+TYN +I      N+C+ DG  + 
Sbjct: 737 RRLDVSPNIVTYNMLI------NACVRDGKLQE 763



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 237/498 (47%), Gaps = 36/498 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I   VR G   ++V +F  M+  G+     +    +S L       +  ++   MR
Sbjct: 188 YDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMR 247

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVI-QRGFVPNIVTCNKILKRLCINGQI 229
             GF  +E     +++ L++ G ++ A  +  Q++   G   ++V    ++   C++G++
Sbjct: 248 EAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEV 307

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           G A  LFD ++  G  P  VT+  LI     E   ++ ++L   M+E  L+     ++++
Sbjct: 308 GKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLV 367

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I GL +  R K+   LL   +D G+  DV  +  ++        +  AV  +D+M   G 
Sbjct: 368 IKGLLRDKRWKDAIGLLELVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGV 426

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P++++Y  L+ G C++GR+ EA  L+ ++  +   P+ +TY++L+ G+ K     + ++
Sbjct: 427 KPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYA 486

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           L + M + G+       ++LINGL                    ++ N       R+   
Sbjct: 487 LLNEMRQNGVSCGDYTYNILINGL--------------------YMVN-------RVCEV 519

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            + +K F+  G     P  +T+  +I G    G + SA  ++ QM K+G+TP+++TY++ 
Sbjct: 520 DEMLKRFLSEGFV---PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSF 576

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  +     + + +   + R+G+ PDIA YN  ++   K+ N+  AL     L   GL
Sbjct: 577 IDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGL 636

Query: 590 EPDIITYNTIICGYCSLN 607
            PD+  YN+ + GY +L 
Sbjct: 637 TPDVTVYNSFVTGYKNLK 654



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 201/401 (50%), Gaps = 14/401 (3%)

Query: 219 ILKRLCINGQIG-NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           ++ R C+ G +  +A  LFD +   G KP+   ++  I+  CK    ++A Q+   M E 
Sbjct: 190 VVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREA 249

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEG----NELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
              P  + YS ++D L K GR+ E     +++LL     G K+DVV+ + +M  Y   G+
Sbjct: 250 GFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLAT---GKKMDVVLATMLMHGYCLHGE 306

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           VG+A+  +D +++ G  P  ++Y +LIKG   +G   E   L  Q++ + L  S   ++ 
Sbjct: 307 VGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNL 366

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           +I G  +  + +D   L + ++  G+ PD      LI+ L     + +A+  + +     
Sbjct: 367 VIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAG 425

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + P++  +++L+ G C   R  + +KL+  M      P+ +T+T L++G   + +  +A 
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAY 485

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  +M + G++    TY+ +I+GL+    +     M K     G  P    YN ++N  
Sbjct: 486 ALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGF 545

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           +K   + +A  ++ Q+  +G+ P+I+TY + I GYC  N C
Sbjct: 546 VKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCC 586



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 162/321 (50%), Gaps = 8/321 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ Y++    D +  +   M   G+         L++ L   N V +  ++ +   
Sbjct: 468 YTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFL 527

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF      Y  ++NG ++ G++ +AF M+RQ+ ++G  PNIVT    +   C      
Sbjct: 528 SEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCD 587

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   +   G +P++  ++  I+ FCK+  + +A     L+++  L PD+ +Y+  +
Sbjct: 588 LAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFV 647

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G      + E ++   + + + +  D  ++++++D +  +G+V  A++ Y  M+    +
Sbjct: 648 TGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVI 707

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE--PSLLTYSSLIDGFCKSGKLRDGF 408
           P+  +++ L  GLC+ G +  A  L     +RRL+  P+++TY+ LI+   + GKL++ F
Sbjct: 708 PDDKTFTALTHGLCRSGDIDGAKRLLDD--MRRLDVSPNIVTYNMLINACVRDGKLQEAF 765

Query: 409 SLYDNMIKRGLKPDAVVCSLL 429
            L+D M+  G+ PD     +L
Sbjct: 766 QLHDEMLSSGVVPDDTTYDIL 786



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 176/391 (45%), Gaps = 9/391 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI    +  K+ E+V ++  M + G+  S      L+    +   + +  KL   M 
Sbjct: 398 YGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMP 457

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KGF      Y  LM G ++K   +NA+ +  ++ Q G      T N ++  L +  ++ 
Sbjct: 458 DKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVC 517

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               +    L  G  P  +T++++IN F K   +  AF +Y  M +  + P+++ Y+  I
Sbjct: 518 EVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFI 577

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  +        +LL+     G++ D+  +++ +D +   G++ RA+     +L  G  
Sbjct: 578 DGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLT 637

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V  Y+  + G      + EA   +  ++ +R+      Y++LIDGF K G +     L
Sbjct: 638 PDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALEL 697

Query: 411 YDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           Y  M+   + PD    + L +GL   GD   A R      R+ + PN+  +N L++ C R
Sbjct: 698 YSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVR 757

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
             +  +  +L   M    + PD  T+ +L R
Sbjct: 758 DGKLQEAFQLHDEMLSSGVVPDDTTYDILPR 788



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 137/338 (40%), Gaps = 75/338 (22%)

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           Y RM+  G +P+  S + L+    +     +A  LF ++  +        Y  +I    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFF----------FQSVRMT 448
            G   D   L+D M   G+KPD  V ++ I+GL  + DA R            F+   +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 449 L--IPNLFIFNTLMDGCCRLK--------RATDTVKLFMLMGMY---------------- 482
              + ++ +    MD   RLK        +  D V   MLM  Y                
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 483 ---NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL-------------------- 519
               + P  +T+ VLI+G  ++G       L  QM+++GL                    
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 520 --------------TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
                          PDV TY  +IH L K + +   ++++  M+  GV P I  Y+ LL
Sbjct: 378 KDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
               ++  +D ALKL+ ++ D+G  P+ +TY T++ GY
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGY 475


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/586 (24%), Positives = 274/586 (46%), Gaps = 39/586 (6%)

Query: 37  AILANLIKTN-NPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRD----VASHVFDKMV 91
           ++L +L   N +P  A+ FF+W     + P+     H LL   +R      A +V + M+
Sbjct: 54  SLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMI 113

Query: 92  IQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
                 +               D +FL+ N +R  +++ +     +   +   LS     
Sbjct: 114 KSCTSPH---------------DATFLL-NLLR--RMNTAAAAADHQHQLAFKLSLTSYN 155

Query: 152 RLMSCLVDSNSVGQYYKLCRAM-RGKGFCVYEFL------MNGLLRKGVIENAFHMHRQV 204
           RL+ CL   + V +   L + M    G  V+  L      +N   + G +  A     ++
Sbjct: 156 RLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRI 215

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           ++    P++ T   ++   C N  +  A  +F V+    P+ N V+++ LI+  C+  KL
Sbjct: 216 LRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVM----PRRNAVSYTNLIHGLCEAGKL 271

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
            +A + +  M E    P +  Y++L+  L ++GR  E   L     +RG + +V  ++ +
Sbjct: 272 HEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVL 331

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D     G +  A++  + M+  G  P+V+ ++ LI   C++G + +A G+ G +  +++
Sbjct: 332 IDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKV 391

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
            P++ TY+ LI GFC+   +    +L + M++  L PD V  + LI+GL     +  A R
Sbjct: 392 CPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASR 451

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F   +R    P+ + FN  M   CR+ R  +  ++   +   ++K +   +T LI G  
Sbjct: 452 LFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYC 511

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G +  A  LF +ML     P+ IT++ +I GL K   +   + + + M +  V P + 
Sbjct: 512 KAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLH 571

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            YN+L+  ++KE + D A ++  +L   G +P+++TY   I  YCS
Sbjct: 572 TYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCS 617



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/530 (24%), Positives = 239/530 (45%), Gaps = 38/530 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI      GK+ E++E +A M + G + +      L+  L +S    +   L   MR
Sbjct: 258 YTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMR 317

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L++ L ++G ++ A  M  +++++G  P++V  N ++   C  G + 
Sbjct: 318 ERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMME 377

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  +  ++      PNV T++ LI  FC+   +++A  L N M+E  L PD++ Y+ LI
Sbjct: 378 DAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLI 437

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL + G +   + L    +  G   D   F++ M     +G VG A Q  + +      
Sbjct: 438 HGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVK 497

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            N  +Y+ LI G C+ G++  A  LF ++L     P+ +T++ +IDG  K GK++D   L
Sbjct: 498 ANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLL 557

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            ++M K  +KP     ++L+  ++ +     A     + +     PN+  +   +   C 
Sbjct: 558 VEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCS 617

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             R  +  ++ + +    +  D   + +LI      G L SA  +  +M   G  P  +T
Sbjct: 618 QGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLT 677

Query: 526 YSAIIHGLFKGK----------------NISV-----------GLH--MFKLMERNGVAP 556
           YS ++  L   K                NISV           G+   +F+ M   G  P
Sbjct: 678 YSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVP 737

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           ++  Y+ L+N L K   L+ A  L+  + + G+ P  I +N+++   C L
Sbjct: 738 NLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKL 787



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 135/590 (22%), Positives = 252/590 (42%), Gaps = 87/590 (14%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G+      LF + + + GC+     Y+ LI+   + G++DE++++   M + G+  +P
Sbjct: 302 ESGRELEALSLFGE-MRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGV--AP 358

Query: 148 DLVQRLMSCLVDS--------NSVG-----QYYKLCRAMRGK-----GFC---------- 179
            +V    + L+ S        ++VG     +  K+C  +R       GFC          
Sbjct: 359 SVVP--FNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMA 416

Query: 180 ---------------VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                           Y  L++GL   GV+++A  + R +I+ GF P+  T N  +  LC
Sbjct: 417 LLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLC 476

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G++G A  + + L     K N   ++ LI+ +CK  K+E A  L+  M+  + +P+ I
Sbjct: 477 RMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSI 536

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            ++++IDGL K G++++   L+       +K  +  ++ +++  +   D  RA +  +R+
Sbjct: 537 TFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRL 596

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           ++ G+ PNV++Y+  IK  C QGRL EA  +  ++    +      Y+ LI+ +   G L
Sbjct: 597 ISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLL 656

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLM------------------------------ 434
              F +   M   G +P  +  S+L+  L+                              
Sbjct: 657 DSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWS 716

Query: 435 ----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
               G     F +      +PNL  ++ L++G C++ R      L+  M    I P  I 
Sbjct: 717 KIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEII 776

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           H  L+      G    A+ L   M++      + +Y  +I GLF+  N      +F  + 
Sbjct: 777 HNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLL 836

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           R G   D   + VL++ L K   +D   +L   +   G      TY+ ++
Sbjct: 837 RCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 213/489 (43%), Gaps = 67/489 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI     +G +D +  +F  M   G   SPD       M CL     VG+ +++  +
Sbjct: 433 YNTLIHGLCEVGVVDSASRLFRLMIRDG--FSPDQWTFNAFMVCLCRMGRVGEAHQILES 490

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           ++ K        Y  L++G  + G IE+A  + ++++    +PN +T N ++  L   G+
Sbjct: 491 LKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGK 550

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  L + +     KP + T++ L+    KE   ++A ++ N ++     P+++ Y+ 
Sbjct: 551 VQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTA 610

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            I      GRL+E  E+++   + G+ LD  +++ +++AY  +G +  A     RM   G
Sbjct: 611 FIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTG 670

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFG------------------------QVLIRRL 384
             P+ ++YSIL+K L  +    E     G                         VL  ++
Sbjct: 671 CEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKM 730

Query: 385 E-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR 439
                 P+L TYS LI+G CK G+L   FSLY +M + G+ P  +               
Sbjct: 731 AECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEI--------------- 775

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                          I N+L+  CC+L    + V L   M   +    + ++ +LI G+ 
Sbjct: 776 ---------------IHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLF 820

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            Q +   A  +F  +L+ G   D + +  +I GL K   +     +  LME+NG      
Sbjct: 821 EQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPE 880

Query: 560 IYNVLLNML 568
            Y++L+  L
Sbjct: 881 TYSMLMQEL 889


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 227/458 (49%), Gaps = 45/458 (9%)

Query: 192 GVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV-------- 242
           G++E A  ++  V++   + P+++ CN +L  L   G+I  A  L+D +L +        
Sbjct: 143 GLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCV 202

Query: 243 -------------------------------GPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
                                          G  PN++ ++TLI+ +CK+  +E A  L+
Sbjct: 203 DNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLF 262

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             +     +P +  Y  +I+G  K G  K  + LL+    RGL ++V V+++++DA    
Sbjct: 263 IELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKH 322

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G + +AV+T + M+  G  P++++Y+ LI G C+ G++ EA  L  Q L + L P+  +Y
Sbjct: 323 GHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSY 382

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVR 446
           + LI  +CK G      +    M +RG KPD V    L++GL+  G+   AL    + + 
Sbjct: 383 TPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLE 442

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             + P+  I+N LM G C+  +      L   M   ++ PD   +  L+ G    G+L  
Sbjct: 443 RGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDE 502

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  LF   +++G+ P ++ Y+A+I G  K   +   +     M++  +APD   Y+ +++
Sbjct: 503 ARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVID 562

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             +K+ +LD A K+F ++     +P+++TY ++I G+C
Sbjct: 563 GYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFC 600



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 251/544 (46%), Gaps = 29/544 (5%)

Query: 89  KMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGI 143
           K + + GK     +L  D  G  GC      Y+ LI+ Y + G ++ +  +F  +   G 
Sbjct: 212 KGLCKEGKLEEGRKLIEDRWGQ-GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGF 270

Query: 144 YLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFH 199
             + +    +++            +L   M  +G  V    Y  +++   + G I  A  
Sbjct: 271 LPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVE 330

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
               +I+ G  P+IVT N ++   C +G++  A  L +  L  G  PN  +++ LI+A+C
Sbjct: 331 TIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYC 390

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K+   ++A      M E    PDL+ Y  L+ GL  AG +     +    L+RG+  D  
Sbjct: 391 KQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAG 450

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           +++ +M        +  A      ML+   LP+   Y+ L+ G  + G L EA  LF   
Sbjct: 451 IYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 510

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
           + + + P ++ Y+++I G+CK G ++D  +  + M KR L PD    S +I+G      +
Sbjct: 511 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 570

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A + F + V+M   PN+  + +L++G CR      ++K+F  M    + P+V+T+++L
Sbjct: 571 DGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSIL 630

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL--------------FKGKNIS 540
           I     +  L  A   F +ML     P+ +T++ +++G               F+    S
Sbjct: 631 IGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQS 690

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           + L+ F  M  +G AP  A YN +L  L +      AL+L  ++T +G  PD +++  ++
Sbjct: 691 MFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALL 750

Query: 601 CGYC 604
            G C
Sbjct: 751 HGVC 754



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 215/445 (48%), Gaps = 19/445 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG  +KG  +    +  ++  RG   N+   N I+     +G I  A    + +
Sbjct: 276 TYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGM 335

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G KP++VT++TLI+  C++ K+ +A QL    +   L+P+   Y+ LI    K G  
Sbjct: 336 IECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGY 395

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
              +  L+   +RG K D+V + +++   V  G+V  A+   ++ML  G  P+   Y+IL
Sbjct: 396 DRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNIL 455

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GLC++ +L  A  L  ++L + + P    Y++L+DGF ++G L +   L++  I++G+
Sbjct: 456 MSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGM 515

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P  V  + +I      G+M DA+    +  +  L P+ F ++T++DG  +        K
Sbjct: 516 NPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQK 575

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  M     KP+V+T+T LI G   +G L  ++ +F +M   GL P+V+TYS +I    
Sbjct: 576 MFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFC 635

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK--------------ECNLDAALKL 580
           K   +      F+ M  N   P+   +N L+N   K              E      L  
Sbjct: 636 KEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNF 695

Query: 581 FGQLTDRGLEPDIITYNTIICGYCS 605
           FG++   G  P    YN+I+   C 
Sbjct: 696 FGRMISDGWAPRSAAYNSILICLCQ 720



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 146/345 (42%), Gaps = 53/345 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+   V  G++D ++ I   M + G++    +   LMS L     +     L   M 
Sbjct: 417 YGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEML 476

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC------ 224
            +       VY  L++G +R G ++ A  +    I++G  P IV  N ++K  C      
Sbjct: 477 DQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMK 536

Query: 225 ------------------------INGQIGN-----ASSLFDVLLLVGPKPNVVTFSTLI 255
                                   I+G +       A  +F  ++ +  KPNVVT+++LI
Sbjct: 537 DAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLI 596

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           N FC++  L ++ +++  M    LVP+++ YSILI    K  +L +        L     
Sbjct: 597 NGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCV 656

Query: 316 LDVVVFSSVMDAYV-----GIGDVGRAVQT---------YDRMLNGGFLPNVISYSILIK 361
            + V F+ +++ +       I + G   Q          + RM++ G+ P   +Y+ ++ 
Sbjct: 657 PNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILI 716

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            LCQ G    A  L  ++  +   P  +++ +L+ G C  G+ ++
Sbjct: 717 CLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKE 761



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 125/321 (38%), Gaps = 47/321 (14%)

Query: 331 IGDVGRAVQTYDRMLNGGFLP--NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
           I DV   ++ +D +  G +    N  +YS L+K L +     E   +   + +  + P+ 
Sbjct: 70  IRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTR 129

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK-PDAVVCSLLIN---------------- 431
              S +I  +  SG +     LY  ++K     PD + C+ L+N                
Sbjct: 130 EAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYD 189

Query: 432 ----------------------------GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
                                       G + +  +          IPN+  +NTL+DG 
Sbjct: 190 EMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGY 249

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+         LF+ + +    P V T+  +I G   +G   +   L  +M  RGLT +V
Sbjct: 250 CKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNV 309

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
             Y+ II   +K  +I   +   + M   G  PDI  YN L++   ++  +  A +L  Q
Sbjct: 310 QVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQ 369

Query: 584 LTDRGLEPDIITYNTIICGYC 604
              +GL P+  +Y  +I  YC
Sbjct: 370 ALGKGLMPNKFSYTPLIHAYC 390



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 113/280 (40%), Gaps = 59/280 (21%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ Y + G + +++     M     +L+PD      ++   V  + +    K+ R 
Sbjct: 522 YNAMIKGYCKFGMMKDAMACINRMKKR--HLAPDEFTYSTVIDGYVKQHDLDGAQKMFRE 579

Query: 173 MRG----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M           Y  L+NG  RKG +  +  + R++   G VPN+VT + ++   C   +
Sbjct: 580 MVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAK 639

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAF------------------------------ 258
           + +A+S F+ +L+    PN VTF+ L+N F                              
Sbjct: 640 LIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRM 699

Query: 259 -------------------CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                              C+      A QL N M     +PD + +  L+ G+   GR 
Sbjct: 700 ISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRS 759

Query: 300 KEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           KE   ++   L +R L++  V +SS++D Y+  G    +V
Sbjct: 760 KEWKNIVSCNLNERELQI-AVNYSSILDQYLPQGTSEASV 798


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 266/533 (49%), Gaps = 49/533 (9%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ L+  Y + G++D+++++ + M + G      ++  L+  L  ++ V + +K+ + M+
Sbjct: 510  YNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMK 569

Query: 175  ----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                      Y  L+ GL ++G ++ A  + + +I     PN ++ N +L  LC NG++ 
Sbjct: 570  EMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVD 629

Query: 231  NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
             A  +   +  +   P+V+T++T+I    KE ++  AF L++ M ++ + PD +    L+
Sbjct: 630  LALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLL 688

Query: 291  DGLFKAGRLKEG----NELLLTALDR-----------GLKLDVVVFSSVMDAYVGIGDV- 334
             G+ K GR+++      E +    D            G+ ++  +  S++ A   + +  
Sbjct: 689  PGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTI 748

Query: 335  -----------------GRAVQTYDRMLNGG----FLPNVISYSILIKGLCQQGRLVE-A 372
                             G+AV  Y+  L         P++ +Y+ LI GL +  RL E A
Sbjct: 749  CEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLK-ARLTEMA 807

Query: 373  CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             GLF ++      P + TY+  +D   KSGK+++ F LY+ M+ RG KP+ +  +++I G
Sbjct: 808  WGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFG 867

Query: 433  L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
            L     +  A+  ++  +     P  + +  L+DG  +L R  +  + F  M  Y   P+
Sbjct: 868  LVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPN 927

Query: 488  VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
               + +L+ G   QG + +A  LF +M+K G+ PD+ +YS ++  L     +   LH F+
Sbjct: 928  CPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFE 987

Query: 548  LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             ++ +G+ PD+  YN+++N L +   ++ AL LF ++ +RG+ PD+ TYN +I
Sbjct: 988  ELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALI 1040



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 217/444 (48%), Gaps = 9/444 (2%)

Query: 171 RAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             MR  GF +    Y  L++ LL+ G    A  ++R+++  G  P++ T + ++  L   
Sbjct: 181 EKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKR 240

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
             I     L   +  +G +PN+ TF+  I    +  K+++A+ +   M +    PD++ Y
Sbjct: 241 RDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTY 300

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++LID L  AG+L    EL L       K D V + +++D +   GD+    + +  M  
Sbjct: 301 TVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEA 360

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G+LP+V++++ILI  LC+ G++ EA G    +  + + P+L TY++LI G  +  +L +
Sbjct: 361 DGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDE 420

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              L+++M   GL+  A    L I+     G  G A++ F +     ++PN+   N  + 
Sbjct: 421 ALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLY 480

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
                 R  +  + F  +    + PD IT+ +L+R     G +  AI L  +M + G  P
Sbjct: 481 SLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDP 540

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           +V+  +++I  L+K   +     MF+ M+   +AP +  YN LL  L KE  +  A  LF
Sbjct: 541 EVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALF 600

Query: 582 GQLTDRGLEPDIITYNTIICGYCS 605
             +      P+ I++NT++   C 
Sbjct: 601 KGMIADDCPPNTISFNTLLDCLCK 624



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/538 (26%), Positives = 247/538 (45%), Gaps = 59/538 (10%)

Query: 70  LIHVLLQSDMRDVASHVFDKMV---------------IQFGKTYNFFRLF-----RDSLG 109
           LIH+LL+S     A  V+ +MV               +  GK  +   +       +SLG
Sbjct: 198 LIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLG 257

Query: 110 DFGCDYSFLIENYV--RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
                Y+F I   +  R GKIDE+  I   M D G    PD+V                 
Sbjct: 258 LRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGC--GPDVV----------------- 298

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                        Y  L++ L   G + NA  +  ++      P+ VT   +L +   +G
Sbjct: 299 ------------TYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHG 346

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            +      +  +   G  P+VVTF+ LI+A CK  K+++AF   ++M +  + P+L  Y+
Sbjct: 347 DLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYN 406

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL +  RL E  EL  +    GL+     +   +D Y   G+ G+A++T+++M   
Sbjct: 407 TLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTN 466

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +PN+++ +  +  L +QGRL EA   F  +    L P  +TY+ L+  + K+G++ D 
Sbjct: 467 GIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDA 526

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L   M + G  P+ V+ + LI+ L     + +A + F +   M L P +  +NTL+ G
Sbjct: 527 IKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAG 586

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +  R  +   LF  M   +  P+ I+   L+  +   G +  A+ + F+M +    PD
Sbjct: 587 LGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPD 646

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           V+TY+ +I+GL K   ++    +F  M++  + PD      LL  +IK+  ++ A ++
Sbjct: 647 VLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRV 703



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 232/503 (46%), Gaps = 12/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI   +R+ ++DE++E+F  M  +G+  +       +     S   G+  K    M+
Sbjct: 405 YNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMK 464

Query: 175 GKGFCVYEFLMNG----LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G        N     L  +G +E A      + + G  P+ +T N +++     G++ 
Sbjct: 465 TNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVD 524

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  L   +   G  P VV  ++LI+   K  ++++A++++  M EM L P ++ Y+ L+
Sbjct: 525 DAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLL 584

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K GR++E   L    +      + + F++++D     G+V  A++   RM      
Sbjct: 585 AGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCF 644

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V++Y+ +I GL ++ R+  A  LF Q + + + P  +T  +L+ G  K G++ D F +
Sbjct: 645 PDVLTYNTVIYGLIKENRVNYAFWLFHQ-MKKVIYPDYVTLCTLLPGVIKDGRIEDAFRV 703

Query: 411 YDNMIKR------GLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
               +        G   + ++  +LI   +G ++ F    V  T+  +  +   L+   C
Sbjct: 704 AKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLC 763

Query: 465 RLKRATDTVKLFM-LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           +  +A D   +F+ L   + I P +  +  LI G+        A  LF++M   G TPDV
Sbjct: 764 KHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDV 823

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+  +  L K   I     +++ M   G  P+   +N+++  L+K  +LD A+ L+  
Sbjct: 824 FTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYD 883

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           L      P   TY  +I G   L
Sbjct: 884 LMSGDFSPTPWTYGPLIDGLLKL 906



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/565 (23%), Positives = 258/565 (45%), Gaps = 38/565 (6%)

Query: 67   IAQLIHVLLQSDMRDVASHVFDKM--------VIQF----------GKTYNFFRLFRDSL 108
            I  LI  L ++D  D A  +F +M        V+ +          G+      LF+  +
Sbjct: 545  INSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMI 604

Query: 109  GDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSN 161
             D  C      ++ L++   + G++D ++++   M++M  +  PD++    ++  L+  N
Sbjct: 605  AD-DCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCF--PDVLTYNTVIYGLIKEN 661

Query: 162  SVGQYYKLCRAMRGKGFCVYEFL---MNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCN 217
             V   + L   M+   +  Y  L   + G+++ G IE+AF + ++ +   G   +     
Sbjct: 662  RVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWE 721

Query: 218  KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY-NLMME 276
             ++  + I  +IG +    + L+      +      L+   CK  K   A+ ++  L   
Sbjct: 722  DLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKS 781

Query: 277  MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
              + P L  Y+ LIDGL KA   +    L     + G   DV  ++  +DA    G +  
Sbjct: 782  FCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKE 841

Query: 337  AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
                Y+ ML  G  PN I+++I+I GL +   L +A  L+  ++     P+  TY  LID
Sbjct: 842  LFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLID 901

Query: 397  GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIP 451
            G  K G+L +    ++ M+  G  P+  + ++L+NG    GD   A   F + V+  + P
Sbjct: 902  GLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRP 961

Query: 452  NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
            +L  ++ ++D  C + +  D +  F  + +  + PD++ + ++I G+     +  A+ LF
Sbjct: 962  DLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLF 1021

Query: 512  FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             +M  RG+TPD+ TY+A+I  L     +     M++ ++  G+ P++  YN L+      
Sbjct: 1022 DEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMS 1081

Query: 572  CNLDAALKLFGQLTDRGLEPDIITY 596
             N D A  ++ ++   G  P+  T+
Sbjct: 1082 GNPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/541 (23%), Positives = 243/541 (44%), Gaps = 49/541 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y  L++ +   G +D   E ++ M   G YL PD+V    L+  L     V + +     
Sbjct: 335 YITLLDKFSDHGDLDAIKEFWSEMEADG-YL-PDVVTFTILIDALCKVGKVDEAFGTLDV 392

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ +G       Y  L+ GLLR   ++ A  +   +   G      T    +     +G+
Sbjct: 393 MKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGE 452

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            G A   F+ +   G  PN+V  +  + +  ++ +LE+A + +N + +  L PD I Y+I
Sbjct: 453 SGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNI 512

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+    KAGR+ +  +LL    + G   +VV+ +S++D       V  A + + RM    
Sbjct: 513 LMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMK 572

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P V++Y+ L+ GL ++GR+ EA  LF  ++     P+ +++++L+D  CK+G++    
Sbjct: 573 LAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLAL 632

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDA----LRFFFQSVRMTLIPNLFIFNTLMDGCC 464
            +   M +    PD +  + +I GL+ +       + F  ++  + P+     TL+ G  
Sbjct: 633 KMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVI 692

Query: 465 RLKRATDTVKLFM-----------------LMGMYNIKPDV----------ITHTV---- 493
           +  R  D  ++                   LMG   I+ ++          + +T+    
Sbjct: 693 KDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDD 752

Query: 494 -----LIRGIASQGSLSSAILLFFQMLKR-GLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
                L++ +   G    A  +F ++ K   +TP +  Y+++I GL K +   +   +F 
Sbjct: 753 SVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFY 812

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            M+  G  PD+  YN+ L+ L K   +     L+ ++  RG +P+ IT+N +I G    N
Sbjct: 813 KMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSN 872

Query: 608 S 608
           S
Sbjct: 873 S 873



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 181/394 (45%), Gaps = 5/394 (1%)

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           TCN +L+ L  + ++ +   +F+++     K ++ T+ T+         L +A      M
Sbjct: 124 TCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKM 183

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            ++  V +   Y  LI  L K+G  +E  ++    +  G+K  +  +S++M A     D+
Sbjct: 184 RKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDI 243

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
              +     M + G  PN+ +++I I+ L + G++ EA G+  ++      P ++TY+ L
Sbjct: 244 ETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVL 303

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMT-L 449
           ID  C +GKL +   L+  M     KPD V    L++        DA++ F+  +     
Sbjct: 304 IDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGY 363

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
           +P++  F  L+D  C++ +  +      +M    + P++ T+  LI G+     L  A+ 
Sbjct: 364 LPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALE 423

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF  M   GL     TY   I    K       +  F+ M+ NG+ P+I   N  L  L 
Sbjct: 424 LFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLA 483

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           ++  L+ A + F  L   GL PD ITYN ++  Y
Sbjct: 484 EQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCY 517



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 161/338 (47%), Gaps = 35/338 (10%)

Query: 54   FFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFF--RLFRDSL 108
            F K T +   +P++     LI  LL++ + ++A  +F KM    G T + F   LF D+L
Sbjct: 775  FLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMK-NAGCTPDVFTYNLFLDAL 833

Query: 109  GDFGCD------YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS 162
            G  G        Y  ++    +   I  ++ IF  +    +  + DL   LMS   D + 
Sbjct: 834  GKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSG--DFSP 891

Query: 163  VGQYY--------KLCRAMRGKGF------------C-VYEFLMNGLLRKGVIENAFHMH 201
                Y        KL R    K F            C +Y  LMNG  ++G +E A  + 
Sbjct: 892  TPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELF 951

Query: 202  RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            R++++ G  P++ + + ++  LC+ G++ +A   F+ L L G  P++V ++ +IN   + 
Sbjct: 952  RRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRS 1011

Query: 262  AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
             ++E+A  L++ M    + PDL  Y+ LI  L  AG ++E  ++      +GL+ +V  +
Sbjct: 1012 QRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTY 1071

Query: 322  SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            ++++  +   G+  RA   Y +M+ GG  PN  +++ L
Sbjct: 1072 NALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 250/527 (47%), Gaps = 17/527 (3%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +F K    FR+  +        ++ +I    + GK++ ++E+F  M  +GI  SP++V  
Sbjct: 224 EFEKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGI--SPNVVTY 281

Query: 153 --LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             +++ L  +  +   ++L   M  KG       Y  L+NGL++    +   H+  ++I 
Sbjct: 282 NCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIG 341

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            GF PN+V  N ++   C  G I  A  + DV++     P  VT  +L+  FCK  ++E 
Sbjct: 342 SGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEH 401

Query: 267 AFQLYNLMME--MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           A      ++   + + PD   YS+ +  L K  R           L R  +   ++ + +
Sbjct: 402 AENALEEILSSGLSIHPD-NCYSV-VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTML 459

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +      G    A + + R+L  G   + ++ + LI GLC  G+L EA  +  ++L R L
Sbjct: 460 VCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGL 519

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
               +TY++LI GFC  GK+   F L + M KRG++PD    + L+ GL     + DA++
Sbjct: 520 PMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIK 579

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            + +     LI N+  +  +M+G C+  R  D   LF  +    ++ + I + ++I+   
Sbjct: 580 LWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHC 639

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G++++A+ L   M  +G+ P+  TYS++IHG+     +    H+   M + G  P++ 
Sbjct: 640 QNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVV 699

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            Y  L+    K   +D A   + ++    + P+  TY  +I GYC L
Sbjct: 700 CYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKL 746



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/533 (23%), Positives = 253/533 (47%), Gaps = 44/533 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    + G++D + E+   M+  G+  +      L++ L+  N   +   +   M 
Sbjct: 281 YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMI 340

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G GF     V+  L++G  + G IE A  +   +I +   P  VT   +++  C + QI 
Sbjct: 341 GSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIE 400

Query: 231 NASSLFDVLLLVG----P-------------------------------KPNVVTFSTLI 255
           +A +  + +L  G    P                               +P+ +  + L+
Sbjct: 401 HAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV 460

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
              CK+ K  +A +L+  ++E       +  + LI GL  AG+L E + ++   L+RGL 
Sbjct: 461 CGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLP 520

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           +D + +++++  +   G V    +  + M   G  P++ +Y+ L++GLC  G+L +A  L
Sbjct: 521 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKL 580

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI----- 430
           + +     L  ++ TY  +++G+CK+ ++ D  +L++ ++ + ++ +++V +++I     
Sbjct: 581 WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQ 640

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           NG +  AL+         ++PN   +++L+ G C +    D   L   M      P+V+ 
Sbjct: 641 NGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVC 700

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +T LI G    G + +A   + +M+   + P+  TY+ +I G  K  N+    ++   M+
Sbjct: 701 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 760

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +G+ PD+  YNVL N   K  ++D A K+  Q+   GL  D ITY T++ G+
Sbjct: 761 ESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 233/493 (47%), Gaps = 31/493 (6%)

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM----RGKGFCVYEFLMNGL------LRK 191
           G Y SP +   L+     S      YKL + M       G+ VY  L+  +      L  
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
            +++ A   + +++  G V N +  +   + LC  G+   A S+   ++  G  P+  T+
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S ++N  C  +K+E AF L+  M    LV D+  Y+I++D   KAG +++  +      +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G   +VV +++++ AY+    V  A + ++ ML+ G LPN+++YS LI G C+ G++ +
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606

Query: 372 ACGLFGQVLIRR----------------LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           AC +F ++   +                  P+++TY +L+DGFCKS ++ +   L D M 
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G +P+ +V   LI+GL     + +A     +         L+ +++L+D   ++KR  
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              K+   M   +  P+V+ +T +I G+   G    A  L   M ++G  P+V+TY+A+I
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G      I   L + + M   GVAP+   Y VL++   K   LD A  L  ++      
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846

Query: 591 PDIITYNTIICGY 603
                Y  +I G+
Sbjct: 847 THTAGYRKVIEGF 859



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 229/506 (45%), Gaps = 91/506 (17%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L   G  E AF + R++I +GF+P+  T +K+L  LC   ++  A  LF+ +   G   +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V T++ ++++FCK   +E+A + +N M E+   P+++ Y+ LI    KA ++   NEL  
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML----------------NGGFLP 351
           T L  G   ++V +S+++D +   G V +A Q ++RM                 +    P
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV++Y  L+ G C+  R+ EA  L   + +   EP+ + Y +LIDG CK GKL +   + 
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M + G        S LI+          A +   + +  +  PN+ I+  ++DG C++
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  +  KL  +M     +P+V+T+T +I G    G + + + L  +M  +G+ P+ +TY
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817

Query: 527 SAIIHGLFKGKNISVGLHMFKLMER---------------------------------NG 553
             +I    K   + V  ++ + M++                                 + 
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDD 877

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKL--------------------------------- 580
            AP +++Y +L++ LIK   L+ AL+L                                 
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 937

Query: 581 ----FGQLTDRGLEPDIITYNTIICG 602
               F ++T +G+ P++ ++ ++I G
Sbjct: 938 AFQLFSEMTKKGVIPEMQSFCSLIKG 963



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/491 (23%), Positives = 220/491 (44%), Gaps = 58/491 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +++++ + G I+++ + F  M ++G   +P++V                        
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGC--TPNVV------------------------ 554

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++  L+   +  A  +   ++  G +PNIVT + ++   C  GQ+  A  
Sbjct: 555 -----TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609

Query: 235 LF----------DVLLLV------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           +F          DV +          +PNVVT+  L++ FCK  ++E+A +L + M    
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             P+ I+Y  LIDGL K G+L E  E+     + G    +  +SS++D Y  +     A 
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           +   +ML     PNV+ Y+ +I GLC+ G+  EA  L   +  +  +P+++TY+++IDGF
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNL 453
              GK+     L + M  +G+ P+ V   +LI     NG + D      + ++ T  P  
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL-DVAHNLLEEMKQTHWPTH 848

Query: 454 FI-FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              +  +++G    K   +++ L   +G  +  P +  + +LI  +     L  A+ L  
Sbjct: 849 TAGYRKVIEGFN--KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906

Query: 513 QM--LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           ++      L     TY+++I  L     +     +F  M + GV P++  +  L+  L +
Sbjct: 907 EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966

Query: 571 ECNLDAALKLF 581
              +  AL L 
Sbjct: 967 NSKISEALLLL 977



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 139/648 (21%), Positives = 263/648 (40%), Gaps = 95/648 (14%)

Query: 48  PTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ--------FGKTYN 99
           P+  I FF W    +   + A + + L+   +RD    V ++ + Q        FG+  N
Sbjct: 145 PSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLN 204

Query: 100 F----------FRLFRDSLG---DFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDM 141
                      F +  + LG   DF        Y+ LI+ +++  ++D +  I   MS  
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENA 197
            + +    ++     L     VG++ +    +  + F      Y  L++GL    + E A
Sbjct: 265 NLRMDGFTLRCFAYSLC---KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
                ++     +PN+VT + +L       Q+G    + +++++ G  P+   F++L++A
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL------FKAGRLKEGNELLLTALD 311
           +C       A++L   M++   +P  ++Y+ILI  +           L    +     L 
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G+ L+ +  SS        G   +A      M+  GF+P+  +YS ++  LC   ++  
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  LF ++    L   + TY+ ++D FCK+G +      ++ M + G  P+ V  + LI+
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561

Query: 432 GLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM------- 479
             +       A   F   +    +PN+  ++ L+DG C+  +     ++F  M       
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621

Query: 480 --GMY-------NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              MY       + +P+V+T+  L+ G      +  A  L   M   G  P+ I Y A+I
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681

Query: 531 HGL-----------------------------------FKGKNISVGLHMFKLMERNGVA 555
            GL                                   FK K   +   +   M  N  A
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           P++ IY  +++ L K    D A KL   + ++G +P+++TY  +I G+
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/557 (21%), Positives = 225/557 (40%), Gaps = 61/557 (10%)

Query: 66  NIAQLIHVLLQS--DMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYV 123
           N+ Q++ ++ QS  D R +A  V     +   K+  F R FR+ L +     S +IE   
Sbjct: 86  NVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQFREKLSE-----SLVIEVLR 140

Query: 124 RIGKIDESVEIFAYMS-DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
            I +    +  F +    +G   +  +   L+  +V  +      +  + +R     V+ 
Sbjct: 141 LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFG 200

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQR----GFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
             +N L+RK     +F +  + + R     F P+  T N +++      ++ +AS +   
Sbjct: 201 EFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 260

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           + L   + +  T      + CK  K  +A     L+   + VPD + Y+ LI GL +A  
Sbjct: 261 MSLANLRMDGFTLRCFAYSLCKVGKWREAL---TLVETENFVPDTVFYTKLISGLCEASL 317

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            +E  + L                                   +RM     LPNV++YS 
Sbjct: 318 FEEAMDFL-----------------------------------NRMRATSCLPNVVTYST 342

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ G   + +L     +   +++    PS   ++SL+  +C SG     + L   M+K G
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402

Query: 419 LKPDAVVCSLLINGLMGD-----------ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             P  VV ++LI  + GD           A + + + +   ++ N    ++     C   
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 462

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +      +   M      PD  T++ ++  + +   +  A LLF +M + GL  DV TY+
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++    K   I      F  M   G  P++  Y  L++  +K   +  A +LF  +   
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582

Query: 588 GLEPDIITYNTIICGYC 604
           G  P+I+TY+ +I G+C
Sbjct: 583 GCLPNIVTYSALIDGHC 599



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 81/356 (22%)

Query: 102 RLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMG----IYLSPDLVQR 152
           R   D++   GC+     Y  LI+   ++GK+DE+ E+   MS+ G    +Y    L+ R
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                    +     K+          +Y  +++GL + G  + A+ + + + ++G  PN
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +VT   ++    + G+I     L + +   G  PN VT+  LI+  CK   L+ A   +N
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA---HN 835

Query: 273 LMMEM------------------------------------DLVPDLIIYSILIDGLFKA 296
           L+ EM                                    D  P L +Y +LID L KA
Sbjct: 836 LLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
            RL    E+ L  L+     +V  FS+ +  Y                          +Y
Sbjct: 896 QRL----EMALRLLE-----EVATFSATLVDYSS------------------------TY 922

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           + LI+ LC   ++  A  LF ++  + + P + ++ SLI G  ++ K+ +   L D
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/526 (26%), Positives = 242/526 (46%), Gaps = 16/526 (3%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           D + + G D     Y+  I  Y R   ++E+ +++  M   G+ L    +  L++ L   
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 161 NSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
               + Y L R M   G       Y  L++ L + G  +    +  +++ RG V ++VT 
Sbjct: 288 GRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
             ++  L   G+           L      N VT++ LI+A CK   +++A Q+   M E
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             + P+++ +S +I+G  K G L +  E      +RG+  +VV + +++D +        
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A++ Y  ML  G   N      L+ GL Q G++ EA  LF       L    + Y++LID
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIP 451
           G  K+G +   F     ++ R + PDAVV ++ IN     G   +A     +   M L P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKP 587

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           +   +NT++   CR       +KL   M M +IKP++IT+  L+ G+   G++  A  L 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M+  G +P  +T+  ++    + + + V L + + M   G+  DI +YN LL +L   
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
                A  +  ++   G+ PD IT+N +I G+C   S  +D  F +
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHC--KSSHLDNAFAT 751



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/539 (22%), Positives = 249/539 (46%), Gaps = 43/539 (7%)

Query: 66  NIAQLIHVLLQSDMRDVASHV--FDKMVIQF------GKTYNFFRLFRD-SLGDFGCDYS 116
           N+ +   VLL+ + + ++ +V  F  ++  F       K   + R+ ++  +      Y 
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
            LI+ + +    D ++E++  M   G+ ++  +V  L++ L  +  + +   L +   G 
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513

Query: 177 GFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
           G  +    Y  L++GL + G +  AF   ++++ R  +P+ V  N  +  LCI G+   A
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEA 573

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
            S+   +  +G KP+  T++T+I + C++ +  KA +L + M    + P+LI Y+ L+ G
Sbjct: 574 KSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           LF  G +++   LL   +  G     +    V+ A      +   +  ++ M+N G   +
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +  Y+ L++ LC  G   +A  +  ++L   + P  +T+++LI G CKS  L + F+ Y 
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            M+ + + P                              N+  FNTL+ G   + R  + 
Sbjct: 754 QMLHQNISP------------------------------NIATFNTLLGGLESVGRIGEA 783

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             + + M    ++P+ +T+ +L+ G   Q +   A+ L+ +M+ +G  P V TY+A+I  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             K   ++    +FK M++ GV P    Y++L++   +  N     K    + ++G  P
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSP 902



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 239/509 (46%), Gaps = 13/509 (2%)

Query: 106 DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSV 163
           D+L   G  Y+ LI+   +   +DE+ ++   M +  I  SP++V    +++  V    +
Sbjct: 373 DNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI--SPNVVTFSSVINGFVKRGLL 430

Query: 164 GQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
            +  +  R M+ +G       Y  L++G  +    + A  ++  ++  G   N    + +
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSL 490

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  L  NG+I  A +LF      G   + V ++TLI+   K   +  AF+    +M+ ++
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +PD ++Y++ I+ L   G+ KE   +L    + GLK D   +++++ ++   G+  +A++
Sbjct: 551 LPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
               M      PN+I+Y+ L+ GL   G + +A  L  +++     PS LT+  ++    
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLF 454
           +S +L     +++ M+  GL  D  V + L+     +G+   A     + +   + P+  
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            FN L+ G C+     +    +  M   NI P++ T   L+ G+ S G +  A  +  +M
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            K GL P+ +TY  ++ G  K  N    + ++  M   G  P ++ YN L++   K   +
Sbjct: 791 EKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGY 603
             A +LF  +  RG+ P   TY+ ++ G+
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGW 879



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 205/436 (47%), Gaps = 36/436 (8%)

Query: 199 HMHRQVI-----QRGFVPNIVTCNKILKRLCINGQIGNASSLFD----VLLLVGPKPNVV 249
           H H   +     +RG   + VT N +L  LC NGQ+  A++L D    +  L     +V+
Sbjct: 116 HAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-----DVI 170

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            ++TLI  +C+      A  + + M    L  D++ Y+ L+ G  +AG++     +L   
Sbjct: 171 GWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMM 230

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
            + G+  +V  ++  +  Y     V  A   Y+ M+  G L +V++ S L+ GLC+ GR 
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  LF ++      P+ +TY +LID   K+G+ ++  SL   M+ RG+  D V  + L
Sbjct: 291 SEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 430 INGL--------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           ++ L        + D LRF        L  N   +  L+D  C+     +  ++ + M  
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSD---NLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
            +I P+V+T + +I G   +G L  A      M +RG+ P+V+TY  +I G FK +    
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L ++  M   GV  +  I + L+N L +   ++ A+ LF   +  GL  D + Y T   
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT--- 524

Query: 602 GYCSLNSCLIDGYFKS 617
                   LIDG FK+
Sbjct: 525 --------LIDGLFKA 532



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 208/465 (44%), Gaps = 49/465 (10%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRG---FVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           L+ GL R G ++ A      +  RG      +++  N ++   C  G    A S+ D + 
Sbjct: 141 LLAGLCRNGQVDAA----AALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G   +VV ++TL+  FC+  +++ A  + ++M E  + P++  Y+  I    +   ++
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  +L    +  G+ LDVV  S+++      G    A   +  M   G +PN ++Y  LI
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLI 316

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD-----GFSLYDN-- 413
             L + GR  E   L G+++ R +   L+TY++L+D   K GK  +      F+L DN  
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376

Query: 414 ----------------------------MIKRGLKPDAVVCSLLIN-----GLMGDALRF 440
                                       M ++ + P+ V  S +IN     GL+  A  +
Sbjct: 377 LNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
                   + PN+  + TL+DG  + +     ++++  M    ++ +      L+ G+  
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQ 496

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK-LMERNGVAPDIA 559
            G +  A+ LF      GL+ D + Y+ +I GLFK  ++       + LM+RN + PD  
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN-MLPDAV 555

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +YNV +N L        A  +  ++ + GL+PD  TYNT+I  +C
Sbjct: 556 VYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHC 600


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 146/581 (25%), Positives = 266/581 (45%), Gaps = 60/581 (10%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQ-SDMRDVASHVFDKMVIQF 94
           +A+L  L+K  +   A++ F    N    P++     V+    +++D++     +M++Q 
Sbjct: 196 SALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRA--KEMIVQM 253

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
             T              GCD     Y+ LI+   +  K+ E+V I   ++  G  L PD+
Sbjct: 254 EAT--------------GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA--GKELKPDV 297

Query: 150 VQRLMS----CLVDSNSVG--QYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQ 203
           V         C V    VG     ++ R            L+ GL ++G +E A ++ ++
Sbjct: 298 VTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKR 357

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           V + G  PNI   N ++  LC       A  LFD +  +G  PN VT+S LI+ FC+  K
Sbjct: 358 VAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGK 417

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L+ A      M++M L P +  Y+ LI+G  K G +     L+   +++ L+  VV ++S
Sbjct: 418 LDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTS 477

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           +M  Y   G + +A++ Y  M   G +P++ +++ L+ GL + G + +A  LF ++    
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQ 443
           ++P+ +TY+ +I+G+C+ G +   F   + MI++G+ PD                     
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDT-------------------- 577

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                     + +  L+ G C   +A++       +   N + + I +T L+ G   +G 
Sbjct: 578 ----------YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           L  A+ +   M  RG+  D++ Y  +I G  K K+  V L + K M   G+ PD  IY  
Sbjct: 628 LEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTS 687

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +++   K  +   A  ++  + + G  P+ +TY  +I G C
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 270/600 (45%), Gaps = 39/600 (6%)

Query: 30  LQFNQANAILANLI----KTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDV 82
           L+F+ + A +++L+    K      A+   K       SPNI     LI  L +    D 
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDE 385

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
           A  +FD+M    GK           L      YS LI+ + R GK+D ++     M DMG
Sbjct: 386 AELLFDRM----GKI---------GLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMG 432

Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAF 198
           +  S      L++       +     L   M  K        Y  LM G   KG I  A 
Sbjct: 433 LKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
            ++ ++  +G VP+I T   +L  L   G I +A  LF  +     KPN VT++ +I  +
Sbjct: 493 RLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGY 552

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLD 317
           C+E  + KAF+  N M+E  +VPD   Y  LI GL   G+  E  ++ +  L +G  +L+
Sbjct: 553 CEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELN 611

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
            + ++ ++  +   G +  A+     M   G   +++ Y +LI G  +        GL  
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLK 671

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
           ++  R L+P  + Y+S+ID   K+G  ++ F ++D MI  G  P+ V  + +INGL    
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMD----GCCRLKRATDTVKLFMLMGMYNIKPDV 488
            + +A     +      +PN   +   +D    G   +K+A + +   +L G+     + 
Sbjct: 732 FVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVE-LHNAILKGLL---ANT 787

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
            T+ +LIRG   QG +  A  L  +M+  G++PD ITY+ +I  L +  ++   + ++  
Sbjct: 788 ATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNS 847

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           M   G+ PD   YN L++       +  A +L  ++  +GL+P+  T  T I    S  S
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISNDSSSKS 907



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 214/418 (51%), Gaps = 10/418 (2%)

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
            +P + T + +L  L      G A  LFD ++ VG +P+V  ++ +I + C+   L +A 
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAK 247

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           ++   M       +++ Y++LIDGL K  ++ E   +      + LK DVV + +++   
Sbjct: 248 EMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGL 307

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             + +    ++  D ML   F P+  + S L++GL ++G++ EA  L  +V    + P++
Sbjct: 308 CKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNI 367

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQ 443
             Y++LID  CK     +   L+D M K GL P+ V  S+LI+     G +  AL F  +
Sbjct: 368 FVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGE 427

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            + M L P+++ +N+L++G C+    +    L   M    ++P V+T+T L+ G  S+G 
Sbjct: 428 MIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGK 487

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           ++ A+ L+ +M  +G+ P + T++ ++ GLF+   I   + +F  M    V P+   YNV
Sbjct: 488 INKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNV 547

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC-----SLNSCLIDGYFK 616
           ++    +E N+  A +   ++ ++G+ PD  +Y  +I G C     S     +DG  K
Sbjct: 548 MIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 174/377 (46%), Gaps = 34/377 (9%)

Query: 233 SSLFDVLLLVGPKPNVVT---FSTLINAFCKEAKLEKAFQLYNLMM-EMDLVPDLIIYSI 288
           S +FD L     K  + +   F  LI  + +  ++     ++ +MM ++ L+P++   S 
Sbjct: 138 SEVFDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSA 197

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ GL K        EL    ++ G++ DV +++ V+ +   + D+ RA +   +M   G
Sbjct: 198 LLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATG 257

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N++ Y++LI GLC++ ++ EA G+   +  + L+P ++TY +L+ G CK  +   G 
Sbjct: 258 CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGL 317

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            + D M++    P     S L+ GL                               +  +
Sbjct: 318 EMIDEMLRLRFSPSEAAVSSLVEGLR------------------------------KRGK 347

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             + + L   +  + + P++  +  LI  +    +   A LLF +M K GL P+ +TYS 
Sbjct: 348 VEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSI 407

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I    +   +   L     M   G+ P +  YN L+N   K  ++ AA  L  ++ ++ 
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467

Query: 589 LEPDIITYNTIICGYCS 605
           LEP ++TY +++ GYCS
Sbjct: 468 LEPTVVTYTSLMGGYCS 484



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 1/154 (0%)

Query: 456 FNTLMDGCCRLKRATDTVKLF-MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           F+ L+    R +R  D V +F M+M   ++ P+V T + L+ G+        A+ LF  M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           +  G+ PDV  Y+ +I  L + K++S    M   ME  G   +I  YNVL++ L K+  +
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
             A+ +   L  + L+PD++TY T++CG C +  
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQE 312


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 212/429 (49%), Gaps = 36/429 (8%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRG--FVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           Y  L+ GL +      A  + R +I RG    P++VT + +L   C  G++  +  L   
Sbjct: 48  YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKE 107

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           ++  G +P+ + ++ ++ + CK A+L +A +L   M+     P LI ++ LI G  +   
Sbjct: 108 VISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKN 167

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L+  + LL T    G+K DVV ++++MD     G +  A Q  +RM   G  P+V++YS 
Sbjct: 168 LEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS 227

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            + GLC+ G+++ A  +  Q+     +P+++TY++++DG CKSGK+     + + M    
Sbjct: 228 FVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS-- 285

Query: 419 LKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
               +  C L                       N+  ++T++DG C+L R  +   +   
Sbjct: 286 ----SDGCGL-----------------------NVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M     +PDV+T++ L+ G+   G +  A+    +M   G  P+ +TY +++HGL     
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378

Query: 539 ISVGLHMFKLM-----ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           ++    M + M       +   P ++ YN L+  L K   +D ALK F ++  +G +PD 
Sbjct: 379 LAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438

Query: 594 ITYNTIICG 602
           ++Y+TI+ G
Sbjct: 439 VSYSTIVEG 447



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 213/462 (46%), Gaps = 65/462 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+E   ++ +  E+ E+   M   G   +PDLV                        
Sbjct: 48  YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLV------------------------ 83

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++G  + G +E +  + ++VI RG  P+ +   K++  LC + ++G A  
Sbjct: 84  -----TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALE 138

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + ++  G  P ++TF+TLI+  C+E  LE A  L   M    +  D++ Y+ L+DGL 
Sbjct: 139 LLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLC 198

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           KAGRL+E  +LL      G   DVV +SS +      G V  A Q  ++M +    PNV+
Sbjct: 199 KAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVV 258

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           +Y+ ++ GLC+ G++  A  +  Q+        +++ YS+++DG CK G+ ++  S+ + 
Sbjct: 259 TYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           M + G +PD V  S L+NGL                              C+  +  + V
Sbjct: 319 MARAGCRPDVVTYSSLVNGL------------------------------CKAGKIEEAV 348

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG-----LTPDVITYSA 528
           +    M M   KP+ +T+  L+ G+ S G L+ A  +  +M   G       P V TY+A
Sbjct: 349 EAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNA 408

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           +I GL K   I   L  F+ M   G  PD   Y+ ++  L +
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 162/306 (52%), Gaps = 9/306 (2%)

Query: 310 LDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
           +DR G   + V F+++++ +   G  G   +  + M   G  PNV+SY+ L++GLC+  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 369 LVEACGLFGQVLIR--RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA--- 423
             EA  L   ++ R  R  P L+TYS+L+ G+CK+GK+ +   L   +I RGL+PDA   
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 424 --VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
             V+ SL  +  +G+AL    + +R    P L  FNTL+ GCCR K       L   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             +K DV+T+  L+ G+   G L  A  L  +M   G  PDV+ YS+ ++GL K   +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL-TDRGLEPDIITYNTII 600
              + + M  +   P++  YN +L+ L K   +D AL++  Q+ +  G   +++ Y+T++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 601 CGYCSL 606
            G C L
Sbjct: 301 DGLCKL 306



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 184/370 (49%), Gaps = 15/370 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS L+  Y + GK++ES E+   +   G+     +  ++M+ L  S  +G+  +L   M 
Sbjct: 85  YSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMI 144

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G C     +  L++G  R+  +E A  + + +   G   ++VT N ++  LC  G++ 
Sbjct: 145 RAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQ 204

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L + +   G  P+VV +S+ +   CK  K+  A Q+   M + D  P+++ Y+ ++
Sbjct: 205 EAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTIL 264

Query: 291 DGLFKAGRLKEGNELLLT-ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           DGL K+G++    E++   A   G  L+VV +S+V+D    +G    A    + M   G 
Sbjct: 265 DGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGC 324

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V++YS L+ GLC+ G++ EA     ++ +   +P+ +TY SL+ G C  G+L +   
Sbjct: 325 RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAER 384

Query: 410 LYDNMIKRGLKPD----------AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           + + M   G   D          A++  L   G + DAL+FF +       P+   ++T+
Sbjct: 385 MVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTI 444

Query: 460 MDGCCRLKRA 469
           ++G  R  RA
Sbjct: 445 VEGLARSGRA 454



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 14/270 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++   + G++ E+ ++   M   G   +PD+V     +  L  S  V   +++   
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGC--APDVVAYSSFVYGLCKSGKVLNAHQVLEQ 247

Query: 173 MRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCING 227
           MR          Y  +++GL + G I+ A  M  Q+    G   N+V  + ++  LC  G
Sbjct: 248 MRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A S+ + +   G +P+VVT+S+L+N  CK  K+E+A +    M      P+ + Y 
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLD-----VVVFSSVMDAYVGIGDVGRAVQTYD 342
            L+ GL   GRL E   ++      G   D     V  +++++      G +  A++ + 
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           RM + G  P+ +SYS +++GL + GR ++A
Sbjct: 428 RMRSQGCDPDGVSYSTIVEGLARSGRALQA 457


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 236/511 (46%), Gaps = 23/511 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  LI+ +     ++ +  +F    D GI L+      L+ CLV+ N V     L   + 
Sbjct: 139 FDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLI 198

Query: 175 GKG----FCVYEFLMNGLLRKGV-----IENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
             G       Y  +MN   R GV     I  A  +  ++   G  PN+VT    +K LC 
Sbjct: 199 KFGPRPNIHTYTIMMNFFCR-GVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCK 257

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            G  G A  L   L       N   F+ +I   C+   L++A +++  M    ++PD+  
Sbjct: 258 VGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYS 317

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           YSILIDG  + GR+ + +E+     + G+  ++  +S ++D +   G V +A++ ++ M 
Sbjct: 318 YSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMK 377

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           N G LP+V SYSILI G C++G +  A   + ++      PS   Y SLI G+ KS +  
Sbjct: 378 NSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFA 437

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLI---------NGLMGDALRFFFQSVRMTLIPNLFIF 456
           +    +  M K G+ PD + C+ ++         N  +  + +F    V      N + +
Sbjct: 438 NALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHF----NPYSY 493

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N  +   CR       ++L  +M   N+ PDV+ ++ LI   A + +   A++LF +M K
Sbjct: 494 NEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTK 553

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G+T +V TY+ +I+       + V   +FK M+ + V PD   Y  L+        +  
Sbjct: 554 VGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTR 613

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           A  LF +++  G  P+++TY   I  Y  LN
Sbjct: 614 ARALFDEMSREGCSPNVVTYTCFINEYLKLN 644



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 206/454 (45%), Gaps = 24/454 (5%)

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           LCR  +      +  ++ GL + G+++ A  + +++   G +P++ + + ++   C  G+
Sbjct: 271 LCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGR 330

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  AS +F  +   G  PN+ ++S LI+ FCKE +++KA +++  M    ++PD+  YSI
Sbjct: 331 VDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSI 390

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDG  + G +    +                + S++  Y        A++ +  M   G
Sbjct: 391 LIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLG 450

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ I+ + ++   C++    +A  L  +     +  +  +Y+  I   C+        
Sbjct: 451 MWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKAL 510

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRM---------TLIPNLF 454
            L   M+KR + PD V  S LI+          A+  F +  ++         T++ NLF
Sbjct: 511 QLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLF 570

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           I +  MD   RL         F  M    + PD I +T L+ G  + G ++ A  LF +M
Sbjct: 571 ISDCKMDVAYRL---------FKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEM 621

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            + G +P+V+TY+  I+   K    +    +++ M+  GV PD  +Y +L+        +
Sbjct: 622 SREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEM 681

Query: 575 DAALKLFGQLTDRG-LEPDIITYNTIICGYCSLN 607
           + A  LF ++   G   P+++ Y  +I  Y  LN
Sbjct: 682 NRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLN 715



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/494 (23%), Positives = 210/494 (42%), Gaps = 37/494 (7%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLM 185
           G +DE+ E+F  M + GI   PD+                               Y  L+
Sbjct: 294 GILDEASEVFKEMKNSGIL--PDVYS-----------------------------YSILI 322

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           +G  RKG ++ A  + +++   G +PNI + + ++   C  G++  A  +F+ +   G  
Sbjct: 323 DGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGIL 382

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+V ++S LI+ FC++  ++ A + +  M   +  P    Y  LI G +K+ +     + 
Sbjct: 383 PDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKE 442

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
                  G+  D +  + ++  Y    D  +A+   ++    G   N  SY+  I  +C+
Sbjct: 443 FRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICR 502

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
                +A  L   +L R + P ++ YS+LI  F K         L+  M K G+  +   
Sbjct: 503 GSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKT 562

Query: 426 CSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            ++LIN  + D     A R F       + P+   + +L+ G C     T    LF  M 
Sbjct: 563 YTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMS 622

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                P+V+T+T  I         + A  L+ +M +RG+ PD I Y+ +I        ++
Sbjct: 623 REGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMN 682

Query: 541 VGLHMFKLMERNG-VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
               +F  M++ G   P++ +Y  L+N  IK    D A KL+ ++  +GL     +  ++
Sbjct: 683 RAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSV 742

Query: 600 ICGYCSLNSCLIDG 613
              +C  +  L  G
Sbjct: 743 SESWCCRHQVLKTG 756



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 215/502 (42%), Gaps = 48/502 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           NA++  L +      A + FK   N    P++     LI    +    D AS VF +M  
Sbjct: 284 NAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR- 342

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
             G   N +             YS LI+ + + G++D+++E+F  M + GI   PD+   
Sbjct: 343 NSGILPNIY------------SYSILIDGFCKEGRVDKALEVFEEMKNSGIL--PDVYS- 387

Query: 153 LMSCLVD----SNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQV 204
             S L+D       +    K    M    F    F    L+ G  +     NA    R +
Sbjct: 388 -YSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIM 446

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
            + G  P+ + CN IL   C       A +L +     G   N  +++  I+  C+ +  
Sbjct: 447 QKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVP 506

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           EKA QL  +M++ +++PD++ YS LI    K    ++   L +     G+  +V  ++ +
Sbjct: 507 EKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTIL 566

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           ++ ++    +  A + +  M      P+ I+Y+ L+ G C  G +  A  LF ++     
Sbjct: 567 INLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGC 626

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALR 439
            P+++TY+  I+ + K  K      LY+ M +RG+ PD ++ ++LI      G M  A  
Sbjct: 627 SPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEA 686

Query: 440 FF---FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
            F    Q  R T  PN+ ++  L++   +L +     KL+  M              L R
Sbjct: 687 LFDEMKQEGRCT--PNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG----------LSR 734

Query: 497 GIASQGSLSSAILLFFQMLKRG 518
             +S+GS+S +     Q+LK G
Sbjct: 735 LCSSEGSVSESWCCRHQVLKTG 756


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 247/507 (48%), Gaps = 34/507 (6%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F ++ ++        +S LIE + + G++++++E +  M  +G+  S   V  ++   + 
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421

Query: 160 SNSVGQYYKLCRAMRGKGFC---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
                +  KL       G     V   +++ L ++G  + A  +  ++  RG  PN+V+ 
Sbjct: 422 GQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSY 481

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++   C    +  A  +F  +L  G KPN  T+S LI+   +    + A ++ N M  
Sbjct: 482 NNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVVVFSSVMDAYVGIGDVG 335
            ++  + ++Y  +I+GL K G+  +  ELL   ++ + L +  + ++S++D +   G++ 
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            AV  Y+ M   G  PNVI+Y+ L+ GLC+  R+ +A  +  ++  + ++  +  Y +LI
Sbjct: 602 SAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
           DGFCK   +    +L+  +++ GL P                                 I
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQP------------------------------I 691

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N+L+ G   L      + L+  M    ++ D+ T+T LI G+   G+L  A  L+ +M 
Sbjct: 692 YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQ 751

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             GL PD I Y+ I++GL K       + MF+ M++N V P++ IYN ++    +E NLD
Sbjct: 752 AVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLD 811

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICG 602
            A +L  ++ D+G+ PD  T++ ++ G
Sbjct: 812 EAFRLHDEMLDKGILPDGATFDILVSG 838



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 157/640 (24%), Positives = 288/640 (45%), Gaps = 70/640 (10%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ----LIHVLLQSDMRDVASHV 86
           Q + A+ I   L + NNP  A++F+ W      S         LIH+L+ S   +     
Sbjct: 69  QKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSP--ETYGRA 126

Query: 87  FDKMVIQFGKTYN-------FFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEI 134
            D ++I++  T N             DS   FG +     +++L+  Y +  + D +V+I
Sbjct: 127 SD-LLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDI 185

Query: 135 FAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLR 190
              M ++ +      V R +S LV  NS+ +  +L   M   G        + LM   LR
Sbjct: 186 VNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLR 245

Query: 191 KGVIENAFHMHRQVIQRGFVPN-------IVTCNKIL--------------KRLCI---- 225
           +     A  +  + I+RG  P+       +  C K L              K+LC+    
Sbjct: 246 EEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQE 305

Query: 226 -----------NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
                       G + +A  L D +L  G   NVV  ++LI   CK   L  A  L++ M
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            +    P+ + +S+LI+   K G +++  E        GL   V    +++  ++     
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A++ +D     G L NV   + ++  LC+QG+  EA  L  ++  R + P++++Y+++
Sbjct: 426 EEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTL 449
           + G C+   +     ++ N++++GLKP+    S+LI+G        +AL          +
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP---DVITHTVLIRGIASQGSLSS 506
             N  ++ T+++G C++ + +   +L  L  M   K      +++  +I G   +G + S
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKAREL--LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDS 602

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A+  + +M   G++P+VITY+++++GL K   +   L M   M+  GV  DI  Y  L++
Sbjct: 603 AVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALID 662

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              K  N+++A  LF +L + GL P    YN++I G+ +L
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNL 702



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/567 (24%), Positives = 245/567 (43%), Gaps = 80/567 (14%)

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
            L+   +R  K  E++E+ +   + G      L    +     +  +     L R M+ K
Sbjct: 238 LLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEK 297

Query: 177 GFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
             CV     Y  ++   +++G +++A  +  +++  G   N+V    ++   C N  + +
Sbjct: 298 KLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVS 357

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  LFD +   GP PN VTFS LI  F K  ++EKA + Y  M  + L P +     +I 
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417

Query: 292 G----------------------------------LFKAGRLKEGNELLLTALDRGLKLD 317
           G                                  L K G+  E  ELL     RG+  +
Sbjct: 418 GWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI----------------- 360
           VV +++VM  +    ++  A   +  +L  G  PN  +YSILI                 
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537

Query: 361 ------------------KGLCQQGRLVEACGLFGQVLI-RRLEPSLLTYSSLIDGFCKS 401
                              GLC+ G+  +A  L   ++  +RL  S ++Y+S+IDGF K 
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G++    + Y+ M   G+ P+ +  + L+NGL     M  AL    +     +  ++  +
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
             L+DG C+         LF  +    + P    +  LI G  + G++ +A+ L+ +MLK
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            GL  D+ TY+ +I GL K  N+ +   ++  M+  G+ PD  IY V++N L K+     
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVK 777

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGY 603
            +K+F ++    + P+++ YN +I G+
Sbjct: 778 VVKMFEEMKKNNVTPNVLIYNAVIAGH 804



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 149/619 (24%), Positives = 276/619 (44%), Gaps = 60/619 (9%)

Query: 16  NKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLL 75
           NK +CS+S       QF +         ++ NP+   +   +      +P  +++  +  
Sbjct: 22  NKPFCSQS-------QFPK---------ESENPSQEQRLLVYGSTSEENPVTSKVSLLSA 65

Query: 76  QSDMRDVASHVFDKMVIQFG------KTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           + + +D AS V D ++ +        + YN+ R +R S  D G  +  LI   V      
Sbjct: 66  KPEQKDDAS-VIDVLLNRRNNPEAALRFYNWARPWRGSFED-GDVFWVLIHILV------ 117

Query: 130 ESVEIFAYMSDMGI-YLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFL 184
            S E +   SD+ I Y+S      + S LV         KL  + +  GF V    + +L
Sbjct: 118 SSPETYGRASDLLIRYVSTSNPTPMASVLVS--------KLVDSAKSFGFEVNSRAFNYL 169

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           +N   +    ++A  +  Q+++   +P     N+ L  L     +  A  L+  ++ +G 
Sbjct: 170 LNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGV 229

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
             + VT   L+ A  +E K  +A ++ +  +E    PD ++YS+ +    K   L   N 
Sbjct: 230 DGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANS 289

Query: 305 LLLTALDRGLKL-DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           LL    ++ L +     ++SV+ A V  G++  A++  D ML+ G   NV++ + LI G 
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+   LV A  LF ++      P+ +T+S LI+ F K+G++      Y  M   GL P  
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409

Query: 424 VVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
                +I G +      +AL+ F +S   T + N+F+ NT++   C+  +  +  +L   
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFE-TGLANVFVCNTILSWLCKQGKTDEATELLSK 468

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    I P+V+++  ++ G   Q ++  A ++F  +L++GL P+  TYS +I G F+  +
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
               L +   M  + +  +  +Y  ++N L K      A +L   + +            
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR--------- 579

Query: 599 IICGYCSLNSCLIDGYFKS 617
            +C  C   + +IDG+FK 
Sbjct: 580 -LCVSCMSYNSIIDGFFKE 597



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 202/413 (48%), Gaps = 29/413 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLL----QSDMRDVASHVFDKMV 91
           N IL+ L K      A +      +    PN+    +V+L    Q +M D+A  VF  ++
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNM-DLARIVFSNIL 505

Query: 92  IQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
            +  K  N+              YS LI+   R      ++E+  +M+   I ++  + Q
Sbjct: 506 EKGLKPNNY-------------TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQ 552

Query: 152 RLMSCLVDSNSVGQYYK----LCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQ 203
            +++ L     VGQ  K    L   +  K  CV    Y  +++G  ++G +++A   + +
Sbjct: 553 TIINGLC---KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +   G  PN++T   ++  LC N ++  A  + D +   G K ++  +  LI+ FCK + 
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +E A  L++ ++E  L P   IY+ LI G    G +    +L    L  GL+ D+  +++
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D  +  G++  A + Y  M   G +P+ I Y++++ GL ++G+ V+   +F ++    
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
           + P++L Y+++I G  + G L + F L+D M+ +G+ PD     +L++G +G+
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGN 842



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 140/267 (52%), Gaps = 8/267 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ + + G++D +V  +  M   GI  SP+++    LM+ L  +N + Q  ++   
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGI--SPNVITYTSLMNGLCKNNRMDQALEMRDE 644

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ KG       Y  L++G  ++  +E+A  +  ++++ G  P+    N ++      G 
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L+  +L  G + ++ T++TLI+   K+  L  A +LY  M  + LVPD IIY++
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +++GL K G+  +  ++        +  +V+++++V+  +   G++  A + +D ML+ G
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGL 375
            LP+  ++ IL+ G     + V A  L
Sbjct: 825 ILPDGATFDILVSGQVGNLQPVRAASL 851


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 209/439 (47%), Gaps = 47/439 (10%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           L+  LV +    Q Y++ R       C      Y  L+ G  + G +E AF +  ++ +R
Sbjct: 75  LLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKER 134

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P++VT + I++ LC  G +  A   F     V   P+ V F+ L++  CK  +L +A
Sbjct: 135 GHSPDVVTHSSIVQALCNTGNLSRAMQYFRES--VECAPDSVLFNILVHGLCKANQLSEA 192

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            Q+   M E  +VPD++ Y+ LIDGL K+ R++E  +LL T + R ++ ++V +++++  
Sbjct: 193 RQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYG 252

Query: 328 YVGIGDVGRAVQTYDRMLNGGF-----------------------------------LPN 352
           Y   G  G A Q  +RM+  G                                     PN
Sbjct: 253 YCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPN 312

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +++Y++LI GLC  GR  EAC L  ++  R + P ++TY+SLI  FC++ ++   F + +
Sbjct: 313 LVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQN 372

Query: 413 NMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M++RG+ PD +       +LL +    +A            IPNLF FN+LM+G C  +
Sbjct: 373 LMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSR 432

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  +   L  +M      P   T+ VL+ G+   G +  A  +   M+  G+ P V +  
Sbjct: 433 RLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSG 492

Query: 528 AIIHGLFKGKNISVGLHMF 546
            I+H L +     + LH F
Sbjct: 493 TIVHTLAREGKQDLALHYF 511



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 188/401 (46%), Gaps = 8/401 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLF-DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           + N  TCN +L+ L    +   A  +F D LL      N +T++TLI  FCK   +E+AF
Sbjct: 66  IHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAF 125

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           QL   M E    PD++ +S ++  L   G L    +    +++     D V+F+ ++   
Sbjct: 126 QLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGL 183

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
                +  A Q  + M   G +P+V++Y+ LI GLC+  R+ EA  L   ++ R++ P+L
Sbjct: 184 CKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNL 243

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +TY++LI G+CK+G       L + MI+ G  PD V  + LI+G      +  A      
Sbjct: 244 VTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHL 303

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
             +    PNL  +N L+ G C   RA +  +L   M    I PD+IT+  LI        
Sbjct: 304 MKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQ 363

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A  +   M++RG+ PD I+Y  +   L K +       +   M   G  P++  +N 
Sbjct: 364 IEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNS 423

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L+  L     LD A  L   +   G +P   TY  ++ G C
Sbjct: 424 LMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 225/506 (44%), Gaps = 87/506 (17%)

Query: 54  FFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC 113
           FF+W    V+  +  + IH        +   +   + +++  + +  +++FRD L    C
Sbjct: 53  FFRW----VTRSHRGESIH-------NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHC 101

Query: 114 D-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV------------------ 150
           D     Y+ LI  + + G ++ + ++ A M + G   SPD+V                  
Sbjct: 102 DTNHITYNTLIGGFCKAGDMERAFQLLAEMKERG--HSPDVVTHSSIVQALCNTGNLSRA 159

Query: 151 ----QRLMSCLVDS-------------NSVGQYYKLCRAMRGKGFC----VYEFLMNGLL 189
               +  + C  DS             N + +  ++   M  +G       Y  L++GL 
Sbjct: 160 MQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLC 219

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           +   +E A  +   +++R   PN+VT N ++   C  G  G A  L + ++  G  P+VV
Sbjct: 220 KSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVV 279

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           TF++LI+ FC+++K++KA ++ +LM +    P+L+ Y++LI GL  AGR  E  ELL   
Sbjct: 280 TFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEM 339

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
             RG+  D++ ++S++  +     + +A Q  + M+  G +P+ ISY  L   L +  R 
Sbjct: 340 DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERF 399

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  L   +      P+L T++SL++G C S +L +   L   M + G  P A    +L
Sbjct: 400 DEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVL 459

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
           + GL                              C+  R  D  ++ ++M    I+P V 
Sbjct: 460 VTGL------------------------------CKAGRVDDAKEVLVMMVSEGIQPLVS 489

Query: 490 THTVLIRGIASQGSLSSAILLFFQML 515
           +   ++  +A +G    A+  F Q++
Sbjct: 490 SSGTIVHTLAREGKQDLALHYFDQVV 515



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 2/95 (2%)

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           ++L +    + ITY+ +I G  K  ++     +   M+  G +PD+  ++ ++  L    
Sbjct: 95  ELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTG 154

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           NL  A++ F +  +    PD + +N ++ G C  N
Sbjct: 155 NLSRAMQYFRESVE--CAPDSVLFNILVHGLCKAN 187


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 233/493 (47%), Gaps = 31/493 (6%)

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM----RGKGFCVYEFLMNGL------LRK 191
           G Y SP +   L+     S      YKL + M       G+ VY  L+  +      L  
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
            +++ A   + +++  G V N +  +   + LC  G+   A S+   ++  G  P+  T+
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S ++N  C  +K+E AF L+  M    LV D+  Y+I++D   KAG +++  +      +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G   +VV +++++ AY+    V  A + ++ ML+ G LPN+++YS LI G C+ G++ +
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606

Query: 372 ACGLFGQVLIRR----------------LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           AC +F ++   +                  P+++TY +L+DGFCKS ++ +   L D M 
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G +P+ +V   LI+GL     + +A     +         L+ +++L+D   ++KR  
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              K+   M   +  P+V+ +T +I G+   G    A  L   M ++G  P+V+TY+A+I
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G      I   L + + M   GVAP+   Y VL++   K   LD A  L  ++      
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846

Query: 591 PDIITYNTIICGY 603
                Y  +I G+
Sbjct: 847 THTAGYRKVIEGF 859



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 229/506 (45%), Gaps = 91/506 (17%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L   G  E AF + R++I +GF+P+  T +K+L  LC   ++  A  LF+ +   G   +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V T++ ++++FCK   +E+A + +N M E+   P+++ Y+ LI    KA ++   NEL  
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML----------------NGGFLP 351
           T L  G   ++V +S+++D +   G V +A Q ++RM                 +    P
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV++Y  L+ G C+  R+ EA  L   + +   EP+ + Y +LIDG CK GKL +   + 
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M + G        S LI+          A +   + +  +  PN+ I+  ++DG C++
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  +  KL  +M     +P+V+T+T +I G    G + + + L  +M  +G+ P+ +TY
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817

Query: 527 SAIIHGLFKGKNISVGLHMFKLMER---------------------------------NG 553
             +I    K   + V  ++ + M++                                 + 
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDD 877

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKL--------------------------------- 580
            AP +++Y +L++ LIK   L+ AL+L                                 
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 937

Query: 581 ----FGQLTDRGLEPDIITYNTIICG 602
               F ++T +G+ P++ ++ ++I G
Sbjct: 938 AFQLFSEMTKKGVIPEMQSFCSLIKG 963



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/491 (23%), Positives = 220/491 (44%), Gaps = 58/491 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +++++ + G I+++ + F  M ++G   +P++V                        
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGC--TPNVV------------------------ 554

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++  L+   +  A  +   ++  G +PNIVT + ++   C  GQ+  A  
Sbjct: 555 -----TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609

Query: 235 LF----------DVLLLV------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           +F          DV +          +PNVVT+  L++ FCK  ++E+A +L + M    
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             P+ I+Y  LIDGL K G+L E  E+     + G    +  +SS++D Y  +     A 
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           +   +ML     PNV+ Y+ +I GLC+ G+  EA  L   +  +  +P+++TY+++IDGF
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNL 453
              GK+     L + M  +G+ P+ V   +LI     NG + D      + ++ T  P  
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL-DVAHNLLEEMKQTHWPTH 848

Query: 454 FI-FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              +  +++G    K   +++ L   +G  +  P +  + +LI  +     L  A+ L  
Sbjct: 849 TAGYRKVIEGFN--KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906

Query: 513 QM--LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           ++      L     TY+++I  L     +     +F  M + GV P++  +  L+  L +
Sbjct: 907 EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966

Query: 571 ECNLDAALKLF 581
              +  AL L 
Sbjct: 967 NSKISEALLLL 977



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 139/648 (21%), Positives = 263/648 (40%), Gaps = 95/648 (14%)

Query: 48  PTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ--------FGKTYN 99
           P+  I FF W    +   + A + + L+   +RD    V ++ + Q        FG+  N
Sbjct: 145 PSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLN 204

Query: 100 F----------FRLFRDSLG---DFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDM 141
                      F +  + LG   DF        Y+ LI+ +++  ++D +  I   MS  
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENA 197
            + +    ++     L     VG++ +    +  + F      Y  L++GL    + E A
Sbjct: 265 NLRMDGFTLRCFAYSLC---KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
                ++     +PN+VT + +L       Q+G    + +++++ G  P+   F++L++A
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL------FKAGRLKEGNELLLTALD 311
           +C       A++L   M++   +P  ++Y+ILI  +           L    +     L 
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G+ L+ +  SS        G   +A      M+  GF+P+  +YS ++  LC   ++  
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  LF ++    L   + TY+ ++D FCK+G +      ++ M + G  P+ V  + LI+
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561

Query: 432 GLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM------- 479
             +       A   F   +    +PN+  ++ L+DG C+  +     ++F  M       
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621

Query: 480 --GMY-------NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              MY       + +P+V+T+  L+ G      +  A  L   M   G  P+ I Y A+I
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681

Query: 531 HGL-----------------------------------FKGKNISVGLHMFKLMERNGVA 555
            GL                                   FK K   +   +   M  N  A
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           P++ IY  +++ L K    D A KL   + ++G +P+++TY  +I G+
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/557 (21%), Positives = 225/557 (40%), Gaps = 61/557 (10%)

Query: 66  NIAQLIHVLLQS--DMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYV 123
           N+ Q++ ++ QS  D R +A  V     +   K+  F R FR+ L +     S +IE   
Sbjct: 86  NVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQFREKLSE-----SLVIEVLR 140

Query: 124 RIGKIDESVEIFAYMS-DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
            I +    +  F +    +G   +  +   L+  +V  +      +  + +R     V+ 
Sbjct: 141 LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFG 200

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQR----GFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
             +N L+RK     +F +  + + R     F P+  T N +++      ++ +AS +   
Sbjct: 201 EFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 260

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           + L   + +  T      + CK  K  +A     L+   + VPD + Y+ LI GL +A  
Sbjct: 261 MSLANLRMDGFTLRCFAYSLCKVGKWREAL---TLVETENFVPDTVFYTKLISGLCEASL 317

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            +E  + L                                   +RM     LPNV++YS 
Sbjct: 318 FEEAMDFL-----------------------------------NRMRATSCLPNVVTYST 342

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ G   + +L     +   +++    PS   ++SL+  +C SG     + L   M+K G
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402

Query: 419 LKPDAVVCSLLINGLMGD-----------ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             P  VV ++LI  + GD           A + + + +   ++ N    ++     C   
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 462

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +      +   M      PD  T++ ++  + +   +  A LLF +M + GL  DV TY+
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++    K   I      F  M   G  P++  Y  L++  +K   +  A +LF  +   
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582

Query: 588 GLEPDIITYNTIICGYC 604
           G  P+I+TY+ +I G+C
Sbjct: 583 GCLPNIVTYSALIDGHC 599



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 81/356 (22%)

Query: 102 RLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMG----IYLSPDLVQR 152
           R   D++   GC+     Y  LI+   ++GK+DE+ E+   MS+ G    +Y    L+ R
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                    +     K+          +Y  +++GL + G  + A+ + + + ++G  PN
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +VT   ++    + G+I     L + +   G  PN VT+  LI+  CK   L+ A   +N
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA---HN 835

Query: 273 LMMEM------------------------------------DLVPDLIIYSILIDGLFKA 296
           L+ EM                                    D  P L +Y +LID L KA
Sbjct: 836 LLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
            RL    E+ L  L+     +V  FS+ +  Y                          +Y
Sbjct: 896 QRL----EMALRLLE-----EVATFSATLVDYSS------------------------TY 922

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           + LI+ LC   ++  A  LF ++  + + P + ++ SLI G  ++ K+ +   L D
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/652 (24%), Positives = 277/652 (42%), Gaps = 115/652 (17%)

Query: 51  AIQFFKWT--HNCVSSPNIAQLI----HVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLF 104
           A++F KW      + + +I QL+    H+L+++ M D A H+  ++ +  GK+   F   
Sbjct: 93  ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 152

Query: 105 RDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
             +      +   Y  LI  Y+R G I +S+EIF  M   G   S      ++  +V S 
Sbjct: 153 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS- 211

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
                        G+   V+ FL                 +++++R   P++ T N ++ 
Sbjct: 212 -------------GEDVSVWSFL-----------------KEMLKRKICPDVATFNILIN 241

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  G    +S L   +   G  P +VT++T+++ +CK+ + + A +L + M    +  
Sbjct: 242 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 301

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+  Y++LI  L ++ R+ +G  LL     R +  + V ++++++ +   G V  A Q  
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 361

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + ML+ G  PN ++++ LI G   +G   EA  +F  +  + L PS ++Y  L+DG CK+
Sbjct: 362 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 421

Query: 402 GKL------------------------------RDGF-----SLYDNMIKRGLKPDAVVC 426
            +                               ++GF      L + M K G+ PD V  
Sbjct: 422 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 481

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           S LING         A     +  R+ L PN  I++TL+  CCR+    + ++++  M +
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541

Query: 482 Y-----------------------------------NIKPDVITHTVLIRGIASQGSLSS 506
                                                I P+ ++   LI G  + G    
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +F +M K G  P   TY +++ GL KG ++       K +     A D  +YN LL 
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
            + K  NL  A+ LFG++  R + PD  TY ++I G C     +I   F  +
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 237/505 (46%), Gaps = 18/505 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA-- 172
           ++ LI+ ++  G   E++++F  M   G  L+P  V      L+D       + L R   
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKG--LTPSEVS--YGVLLDGLCKNAEFDLARGFY 431

Query: 173 --MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M+  G CV    Y  +++GL + G ++ A  +  ++ + G  P+IVT + ++   C  
Sbjct: 432 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 491

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+   A  +   +  VG  PN + +STLI   C+   L++A ++Y  M+      D   +
Sbjct: 492 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 551

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++L+  L KAG++ E  E +      G+  + V F  +++ Y   G+  +A   +D M  
Sbjct: 552 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P   +Y  L+KGLC+ G L EA      +         + Y++L+   CKSG L  
Sbjct: 612 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 671

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQS-VRMTLIPNLFIFNTLM 460
             SL+  M++R + PD+   + LI+GL        A+ F  ++  R  ++PN  ++   +
Sbjct: 672 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 731

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG  +  +    +     M      PD++T   +I G +  G +     L  +M  +   
Sbjct: 732 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 791

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P++ TY+ ++HG  K K++S    +++ +  NG+ PD    + L+  + +   L+  LK+
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851

Query: 581 FGQLTDRGLEPDIITYNTIICGYCS 605
                 RG+E D  T+N +I   C+
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCA 876



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 16/506 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  +   GK+  + ++   M   G  LSP+ V    L+   +   +  +  K+   
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFG--LSPNHVTFNALIDGHISEGNFKEALKMFYM 398

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  L++GL +    + A   + ++ + G     +T   ++  LC NG 
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L + +   G  P++VT+S LIN FCK  + + A ++   +  + L P+ IIYS 
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    + G LKE   +    +  G   D   F+ ++ +    G V  A +    M + G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LPN +S+  LI G    G  ++A  +F ++      P+  TY SL+ G CK G LR+  
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
               ++       D V+ + L+     +G +  A+  F + V+ +++P+ + + +L+ G 
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698

Query: 464 CRLKRATDTVKLFMLMGMY--NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           CR K  T    LF        N+ P+ + +T  + G+   G   + I    QM   G TP
Sbjct: 699 CR-KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 757

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D++T +A+I G  +   I     +   M      P++  YN+LL+   K  ++  +  L+
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLN 607
             +   G+ PD +T ++++ G C  N
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESN 843



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 131/549 (23%), Positives = 239/549 (43%), Gaps = 45/549 (8%)

Query: 102  RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            R++R  L   G  YS LI N  R+G + E++ I+  M   G          L++ L  + 
Sbjct: 503  RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 562

Query: 162  SVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
             V +  +  R M   G       ++ L+NG    G    AF +  ++ + G  P   T  
Sbjct: 563  KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622

Query: 218  KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
             +LK LC  G +  A      L  V    + V ++TL+ A CK   L KA  L+  M++ 
Sbjct: 623  SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682

Query: 278  DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL-DVVVFSSVMDAYVGIGDVGR 336
             ++PD   Y+ LI GL + G+          A  RG  L + V+++  +D     G    
Sbjct: 683  SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742

Query: 337  AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
             +   ++M N G  P++++ + +I G  + G++ +   L  ++  +   P+L TY+ L+ 
Sbjct: 743  GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 802

Query: 397  GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIP 451
            G+ K   +   F LY ++I  G+ PD + C  L+ G     ++   L+     +   +  
Sbjct: 803  GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 862

Query: 452  NLFIFNTLMDGCC---RLKRATDTVKLFMLMGM--------------------------- 481
            + + FN L+  CC    +  A D VK+   +G+                           
Sbjct: 863  DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 922

Query: 482  -----YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
                   I P+   +  LI G+   G + +A ++  +M+   + P  +  SA++  L K 
Sbjct: 923  HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 982

Query: 537  KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
                    + + M +  + P IA +  L+++  K  N+  AL+L   +++ GL+ D+++Y
Sbjct: 983  GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1042

Query: 597  NTIICGYCS 605
            N +I G C+
Sbjct: 1043 NVLITGLCA 1051



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/433 (22%), Positives = 195/433 (45%), Gaps = 16/433 (3%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ L+    + G + ++V +F  M    I         L+S L             +   
Sbjct: 656  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715

Query: 175  GKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +G       +Y   ++G+ + G  +   +   Q+   G  P+IVT N ++      G+I
Sbjct: 716  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775

Query: 230  GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
               + L   +      PN+ T++ L++ + K   +  +F LY  ++   ++PD +    L
Sbjct: 776  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835

Query: 290  IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
            + G+ ++  L+ G ++L   + RG+++D   F+ ++      G++  A      M + G 
Sbjct: 836  VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895

Query: 350  LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
              +  +   ++  L +  R  E+  +  ++  + + P    Y  LI+G C+ G ++  F 
Sbjct: 896  SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 955

Query: 410  LYDNMIKRGLKPDAVVCSLLINGLM--GDA------LRFFFQSVRMTLIPNLFIFNTLMD 461
            + + MI   + P  V  S ++  L   G A      LRF    ++M L+P +  F TLM 
Sbjct: 956  VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM---LKMKLVPTIASFTTLMH 1012

Query: 462  GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             CC+     + ++L ++M    +K D++++ VLI G+ ++G ++ A  L+ +M   G   
Sbjct: 1013 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1072

Query: 522  DVITYSAIIHGLF 534
            +  TY A+I GL 
Sbjct: 1073 NATTYKALIRGLL 1085



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/336 (20%), Positives = 147/336 (43%), Gaps = 33/336 (9%)

Query: 100  FFRLFRDSLGDFG--CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
            +FR   D+LG        + +I+ Y R+GKI+++ ++   M +                 
Sbjct: 745  YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN--------------- 789

Query: 158  VDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
                             G     Y  L++G  ++  +  +F ++R +I  G +P+ +TC+
Sbjct: 790  ----------------GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833

Query: 218  KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
             ++  +C +  +     +    +  G + +  TF+ LI+  C   ++  AF L  +M  +
Sbjct: 834  SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 893

Query: 278  DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
             +  D      ++  L +  R +E   +L     +G+  +   +  +++    +GD+  A
Sbjct: 894  GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 953

Query: 338  VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
                + M+     P  ++ S +++ L + G+  EA  L   +L  +L P++ ++++L+  
Sbjct: 954  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 1013

Query: 398  FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             CK+G + +   L   M   GLK D V  ++LI GL
Sbjct: 1014 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 13/239 (5%)

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA-----LRF 440
           PS+  Y  LI  + + G ++D   ++  M   G  P    C+ ++  ++          F
Sbjct: 163 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             + ++  + P++  FN L++  C       +  L   M      P ++T+  ++     
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           +G   +AI L   M  +G+  DV TY+ +IH L +   I+ G  + + M +  + P+   
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           YN L+N    E  +  A +L  ++   GL P+ +T+N +I G+ S      +G FK  +
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS------EGNFKEAL 393


>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 373

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 191/352 (54%), Gaps = 6/352 (1%)

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C+   ++ A ++Y  M E  + PD ++Y+ +++G F+AGR+K+  EL    + R    +V
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREDSQNV 59

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           V F+ +M    G GDV +A+  ++ M   GF+ +  +Y IL+ G C+ G + ++  + G 
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGI 119

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG--- 435
              +        YS++I+G CK  KL +  S+ + MIK G  P+A V + LING +G   
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSK 179

Query: 436 --DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             DA+R F +       P +  +NTL++G C+ +R  +   L   M     KP VIT+++
Sbjct: 180 FDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSL 239

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L++G+     +  A+ L+ Q++  GL PDV   + +IHGL       + L ++  M R  
Sbjct: 240 LMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWN 299

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            AP++  +N L+    K+ ++  AL ++ ++   GL+PDI++YN  + G CS
Sbjct: 300 CAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCS 351



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 188/361 (52%), Gaps = 6/361 (1%)

Query: 166 YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
           Y ++  +       VY  ++NG  R G I++   +  +++ R    N+V+ N +++ L  
Sbjct: 13  YKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREDSQNVVSFNIMMRGLFG 71

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           NG +  A S+++++   G   +  T+  L++ FCK   + K+ ++  +  E   V D   
Sbjct: 72  NGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVLDAFA 131

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           YS +I+GL K  +L E   +L   +  G   +  V++++++ +VG+     A++ +  M 
Sbjct: 132 YSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMG 191

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           +    P V++Y+ LI GLC+  R  EA  L  ++L +  +P ++TYS L+ G C+  K+ 
Sbjct: 192 STNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVE 251

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLM 460
               L++ +I  GLKPD  + ++LI+GL  +G    AL  +F   R    PNL   NTLM
Sbjct: 252 MALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLM 311

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +G  +     + + ++  +    ++PD++++ + ++G+ S   +S AIL     L + + 
Sbjct: 312 EGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIA 371

Query: 521 P 521
           P
Sbjct: 372 P 372



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 184/372 (49%), Gaps = 6/372 (1%)

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
             G I+ A  +++++ +    P+ V  N +L      G+I +   L++ L+      NVV
Sbjct: 2   ESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWE-LMGREDSQNVV 60

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           +F+ ++        ++KA  ++ LM +   V D   Y IL+DG  K G + +   +L  A
Sbjct: 61  SFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIA 120

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
            ++G  LD   +S++++       +  AV   + M+  G  PN   Y+ LI G     + 
Sbjct: 121 EEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKF 180

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  +F ++      P+++TY++LI+G CK  +  + + L   M+++G KP  +  SLL
Sbjct: 181 DDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLL 240

Query: 430 INGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           + GL        AL+ + Q +   L P++ + N L+ G C + +    + L+  M  +N 
Sbjct: 241 MKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNC 300

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            P+++TH  L+ G    G + +A+ ++ ++L+ GL PD+++Y+  + GL     IS  + 
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAIL 360

Query: 545 MFKLMERNGVAP 556
             +      +AP
Sbjct: 361 FLQDALAKKIAP 372



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 4/277 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L++ + + G I++S+ +     + G  L       +++ L     + +   +   M 
Sbjct: 97  YGILVDGFCKNGYINKSLRVLGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMI 156

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      VY  L+NG +     ++A  + R++      P +VT N ++  LC   +  
Sbjct: 157 KNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFA 216

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   +L  G KP V+T+S L+   C+  K+E A QL+N ++   L PD+ + +ILI
Sbjct: 217 EAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILI 276

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL   G+ +    L           ++V  +++M+ +   GD+  A+  + R+L  G  
Sbjct: 277 HGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQ 336

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           P+++SY+I +KGLC   R+  A       L +++ PS
Sbjct: 337 PDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPS 373



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 136/280 (48%), Gaps = 6/280 (2%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           GD+  A + Y  M      P+ + Y+ ++ G  + GR+ +   L+ +++ R    +++++
Sbjct: 4   GDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREDSQNVVSF 62

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVR 446
           + ++ G   +G +    S+++ M + G   D+    +L+     NG +  +LR    +  
Sbjct: 63  NIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEE 122

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              + + F ++ +++G C+  +  + V +   M      P+   +  LI G         
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDD 182

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           AI +F +M     +P V+TY+ +I+GL KG+  +    + K M   G  P +  Y++L+ 
Sbjct: 183 AIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMK 242

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            L +   ++ AL+L+ Q+   GL+PD+   N +I G CS+
Sbjct: 243 GLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSV 282


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/652 (24%), Positives = 277/652 (42%), Gaps = 115/652 (17%)

Query: 51  AIQFFKWT--HNCVSSPNIAQLI----HVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLF 104
           A++F KW      + + +I QL+    H+L+++ M D A H+  ++ +  GK+   F   
Sbjct: 53  ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 112

Query: 105 RDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
             +      +   Y  LI  Y+R G I +S+EIF  M   G   S      ++  +V S 
Sbjct: 113 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS- 171

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
                        G+   V+ FL                 +++++R   P++ T N ++ 
Sbjct: 172 -------------GEDVSVWSFL-----------------KEMLKRKICPDVATFNILIN 201

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  G    +S L   +   G  P +VT++T+++ +CK+ + + A +L + M    +  
Sbjct: 202 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 261

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+  Y++LI  L ++ R+ +G  LL     R +  + V ++++++ +   G V  A Q  
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 321

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + ML+ G  PN ++++ LI G   +G   EA  +F  +  + L PS ++Y  L+DG CK+
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 381

Query: 402 GKL------------------------------RDGF-----SLYDNMIKRGLKPDAVVC 426
            +                               ++GF      L + M K G+ PD V  
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           S LING         A     +  R+ L PN  I++TL+  CCR+    + ++++  M +
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501

Query: 482 Y-----------------------------------NIKPDVITHTVLIRGIASQGSLSS 506
                                                I P+ ++   LI G  + G    
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +F +M K G  P   TY +++ GL KG ++       K +     A D  +YN LL 
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
            + K  NL  A+ LFG++  R + PD  TY ++I G C     +I   F  +
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 237/505 (46%), Gaps = 18/505 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA-- 172
           ++ LI+ ++  G   E++++F  M   G  L+P  V      L+D       + L R   
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKG--LTPSEVS--YGVLLDGLCKNAEFDLARGFY 391

Query: 173 --MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M+  G CV    Y  +++GL + G ++ A  +  ++ + G  P+IVT + ++   C  
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 451

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+   A  +   +  VG  PN + +STLI   C+   L++A ++Y  M+      D   +
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++L+  L KAG++ E  E +      G+  + V F  +++ Y   G+  +A   +D M  
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P   +Y  L+KGLC+ G L EA      +         + Y++L+   CKSG L  
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 631

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQS-VRMTLIPNLFIFNTLM 460
             SL+  M++R + PD+   + LI+GL        A+ F  ++  R  ++PN  ++   +
Sbjct: 632 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 691

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG  +  +    +     M      PD++T   +I G +  G +     L  +M  +   
Sbjct: 692 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 751

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P++ TY+ ++HG  K K++S    +++ +  NG+ PD    + L+  + +   L+  LK+
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811

Query: 581 FGQLTDRGLEPDIITYNTIICGYCS 605
                 RG+E D  T+N +I   C+
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCA 836



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 16/506 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  +   GK+  + ++   M   G  LSP+ V    L+   +   +  +  K+   
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFG--LSPNHVTFNALIDGHISEGNFKEALKMFYM 358

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  L++GL +    + A   + ++ + G     +T   ++  LC NG 
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L + +   G  P++VT+S LIN FCK  + + A ++   +  + L P+ IIYS 
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    + G LKE   +    +  G   D   F+ ++ +    G V  A +    M + G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LPN +S+  LI G    G  ++A  +F ++      P+  TY SL+ G CK G LR+  
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
               ++       D V+ + L+     +G +  A+  F + V+ +++P+ + + +L+ G 
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 464 CRLKRATDTVKLFMLMGMY--NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           CR K  T    LF        N+ P+ + +T  + G+   G   + I    QM   G TP
Sbjct: 659 CR-KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 717

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           D++T +A+I G  +   I     +   M      P++  YN+LL+   K  ++  +  L+
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLN 607
             +   G+ PD +T ++++ G C  N
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESN 803



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 131/549 (23%), Positives = 239/549 (43%), Gaps = 45/549 (8%)

Query: 102  RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            R++R  L   G  YS LI N  R+G + E++ I+  M   G          L++ L  + 
Sbjct: 463  RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522

Query: 162  SVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
             V +  +  R M   G       ++ L+NG    G    AF +  ++ + G  P   T  
Sbjct: 523  KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582

Query: 218  KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
             +LK LC  G +  A      L  V    + V ++TL+ A CK   L KA  L+  M++ 
Sbjct: 583  SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642

Query: 278  DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL-DVVVFSSVMDAYVGIGDVGR 336
             ++PD   Y+ LI GL + G+          A  RG  L + V+++  +D     G    
Sbjct: 643  SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702

Query: 337  AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
             +   ++M N G  P++++ + +I G  + G++ +   L  ++  +   P+L TY+ L+ 
Sbjct: 703  GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762

Query: 397  GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIP 451
            G+ K   +   F LY ++I  G+ PD + C  L+ G     ++   L+     +   +  
Sbjct: 763  GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822

Query: 452  NLFIFNTLMDGCC---RLKRATDTVKLFMLMGM--------------------------- 481
            + + FN L+  CC    +  A D VK+   +G+                           
Sbjct: 823  DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882

Query: 482  -----YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
                   I P+   +  LI G+   G + +A ++  +M+   + P  +  SA++  L K 
Sbjct: 883  HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942

Query: 537  KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
                    + + M +  + P IA +  L+++  K  N+  AL+L   +++ GL+ D+++Y
Sbjct: 943  GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002

Query: 597  NTIICGYCS 605
            N +I G C+
Sbjct: 1003 NVLITGLCA 1011



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/433 (22%), Positives = 195/433 (45%), Gaps = 16/433 (3%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ L+    + G + ++V +F  M    I         L+S L             +   
Sbjct: 616  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675

Query: 175  GKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +G       +Y   ++G+ + G  +   +   Q+   G  P+IVT N ++      G+I
Sbjct: 676  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 230  GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
               + L   +      PN+ T++ L++ + K   +  +F LY  ++   ++PD +    L
Sbjct: 736  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 290  IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
            + G+ ++  L+ G ++L   + RG+++D   F+ ++      G++  A      M + G 
Sbjct: 796  VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855

Query: 350  LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
              +  +   ++  L +  R  E+  +  ++  + + P    Y  LI+G C+ G ++  F 
Sbjct: 856  SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915

Query: 410  LYDNMIKRGLKPDAVVCSLLINGLM--GDA------LRFFFQSVRMTLIPNLFIFNTLMD 461
            + + MI   + P  V  S ++  L   G A      LRF    ++M L+P +  F TLM 
Sbjct: 916  VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM---LKMKLVPTIASFTTLMH 972

Query: 462  GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             CC+     + ++L ++M    +K D++++ VLI G+ ++G ++ A  L+ +M   G   
Sbjct: 973  LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032

Query: 522  DVITYSAIIHGLF 534
            +  TY A+I GL 
Sbjct: 1033 NATTYKALIRGLL 1045



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/413 (20%), Positives = 172/413 (41%), Gaps = 51/413 (12%)

Query: 100  FFRLFRDSLGDFG--CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
            +FR   D+LG        + +I+ Y R+GKI+++ ++   M +                 
Sbjct: 705  YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN--------------- 749

Query: 158  VDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
                             G     Y  L++G  ++  +  +F ++R +I  G +P+ +TC+
Sbjct: 750  ----------------GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793

Query: 218  KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
             ++  +C +  +     +    +  G + +  TF+ LI+  C   ++  AF L  +M  +
Sbjct: 794  SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853

Query: 278  DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
             +  D      ++  L +  R +E   +L     +G+  +   +  +++    +GD+  A
Sbjct: 854  GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913

Query: 338  VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
                + M+     P  ++ S +++ L + G+  EA  L   +L  +L P++ ++++L+  
Sbjct: 914  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973

Query: 398  FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
             CK+G + +   L   M   GLK D V  ++LI GL     M  A   + +      + N
Sbjct: 974  CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033

Query: 453  LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
               +  L+ G   L R T         G      D+I   +L RG  +  SLS
Sbjct: 1034 ATTYKALIRGL--LARET------AFSG-----ADIILKDLLARGFITSMSLS 1073



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 13/239 (5%)

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA-----LRF 440
           PS+  Y  LI  + + G ++D   ++  M   G  P    C+ ++  ++          F
Sbjct: 123 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             + ++  + P++  FN L++  C       +  L   M      P ++T+  ++     
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           +G   +AI L   M  +G+  DV TY+ +IH L +   I+ G  + + M +  + P+   
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           YN L+N    E  +  A +L  ++   GL P+ +T+N +I G+ S      +G FK  +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS------EGNFKEAL 353


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 233/493 (47%), Gaps = 31/493 (6%)

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM----RGKGFCVYEFLMNGL------LRK 191
           G Y SP +   L+     S      YKL + M       G+ VY  L+  +      L  
Sbjct: 326 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNF 385

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
            +++ A   + +++  G V N +  +   + LC  G+   A S+   ++  G  P+  T+
Sbjct: 386 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 445

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S ++N  C  +K+E AF L+  M    LV D+  Y+I++D   KAG +++  +      +
Sbjct: 446 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 505

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G   +VV +++++ AY+    V  A + ++ ML+ G LPN+++YS LI G C+ G++ +
Sbjct: 506 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 565

Query: 372 ACGLFGQVLIRR----------------LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           AC +F ++   +                  P+++TY +L+DGFCKS ++ +   L D M 
Sbjct: 566 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 625

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G +P+ +V   LI+GL     + +A     +         L+ +++L+D   ++KR  
Sbjct: 626 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 685

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              K+   M   +  P+V+ +T +I G+   G    A  L   M ++G  P+V+TY+A+I
Sbjct: 686 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 745

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G      I   L + + M   GVAP+   Y VL++   K   LD A  L  ++      
Sbjct: 746 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 805

Query: 591 PDIITYNTIICGY 603
                Y  +I G+
Sbjct: 806 THTAGYRKVIEGF 818



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 229/506 (45%), Gaps = 91/506 (17%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L   G  E AF + R++I +GF+P+  T +K+L  LC   ++  A  LF+ +   G   +
Sbjct: 417 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 476

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V T++ ++++FCK   +E+A + +N M E+   P+++ Y+ LI    KA ++   NEL  
Sbjct: 477 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 536

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML----------------NGGFLP 351
           T L  G   ++V +S+++D +   G V +A Q ++RM                 +    P
Sbjct: 537 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 596

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV++Y  L+ G C+  R+ EA  L   + +   EP+ + Y +LIDG CK GKL +   + 
Sbjct: 597 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 656

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M + G        S LI+          A +   + +  +  PN+ I+  ++DG C++
Sbjct: 657 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 716

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  +  KL  +M     +P+V+T+T +I G    G + + + L  +M  +G+ P+ +TY
Sbjct: 717 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 776

Query: 527 SAIIHGLFKGKNISVGLHMFKLMER---------------------------------NG 553
             +I    K   + V  ++ + M++                                 + 
Sbjct: 777 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDD 836

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKL--------------------------------- 580
            AP +++Y +L++ LIK   L+ AL+L                                 
Sbjct: 837 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 896

Query: 581 ----FGQLTDRGLEPDIITYNTIICG 602
               F ++T +G+ P++ ++ ++I G
Sbjct: 897 AFQLFSEMTKKGVIPEMQSFCSLIKG 922



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/491 (23%), Positives = 220/491 (44%), Gaps = 58/491 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +++++ + G I+++ + F  M ++G   +P++V                        
Sbjct: 480 YTIMVDSFCKAGLIEQARKWFNEMREVGC--TPNVV------------------------ 513

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++  L+   +  A  +   ++  G +PNIVT + ++   C  GQ+  A  
Sbjct: 514 -----TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 568

Query: 235 LF----------DVLLLV------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           +F          DV +          +PNVVT+  L++ FCK  ++E+A +L + M    
Sbjct: 569 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 628

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             P+ I+Y  LIDGL K G+L E  E+     + G    +  +SS++D Y  +     A 
Sbjct: 629 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 688

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           +   +ML     PNV+ Y+ +I GLC+ G+  EA  L   +  +  +P+++TY+++IDGF
Sbjct: 689 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNL 453
              GK+     L + M  +G+ P+ V   +LI     NG + D      + ++ T  P  
Sbjct: 749 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL-DVAHNLLEEMKQTHWPTH 807

Query: 454 FI-FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              +  +++G    K   +++ L   +G  +  P +  + +LI  +     L  A+ L  
Sbjct: 808 TAGYRKVIEGFN--KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 865

Query: 513 QM--LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           ++      L     TY+++I  L     +     +F  M + GV P++  +  L+  L +
Sbjct: 866 EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 925

Query: 571 ECNLDAALKLF 581
              +  AL L 
Sbjct: 926 NSKISEALLLL 936



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 139/648 (21%), Positives = 263/648 (40%), Gaps = 95/648 (14%)

Query: 48  PTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ--------FGKTYN 99
           P+  I FF W    +   + A + + L+   +RD    V ++ + Q        FG+  N
Sbjct: 104 PSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLN 163

Query: 100 F----------FRLFRDSLG---DFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDM 141
                      F +  + LG   DF        Y+ LI+ +++  ++D +  I   MS  
Sbjct: 164 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 223

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENA 197
            + +    ++     L     VG++ +    +  + F      Y  L++GL    + E A
Sbjct: 224 NLRMDGFTLRCFAYSLC---KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEA 280

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
                ++     +PN+VT + +L       Q+G    + +++++ G  P+   F++L++A
Sbjct: 281 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 340

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL------FKAGRLKEGNELLLTALD 311
           +C       A++L   M++   +P  ++Y+ILI  +           L    +     L 
Sbjct: 341 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLA 400

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G+ L+ +  SS        G   +A      M+  GF+P+  +YS ++  LC   ++  
Sbjct: 401 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 460

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  LF ++    L   + TY+ ++D FCK+G +      ++ M + G  P+ V  + LI+
Sbjct: 461 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 520

Query: 432 GLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM------- 479
             +       A   F   +    +PN+  ++ L+DG C+  +     ++F  M       
Sbjct: 521 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 580

Query: 480 --GMY-------NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              MY       + +P+V+T+  L+ G      +  A  L   M   G  P+ I Y A+I
Sbjct: 581 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 640

Query: 531 HGL-----------------------------------FKGKNISVGLHMFKLMERNGVA 555
            GL                                   FK K   +   +   M  N  A
Sbjct: 641 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 700

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           P++ IY  +++ L K    D A KL   + ++G +P+++TY  +I G+
Sbjct: 701 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/557 (21%), Positives = 225/557 (40%), Gaps = 61/557 (10%)

Query: 66  NIAQLIHVLLQS--DMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYV 123
           N+ Q++ ++ QS  D R +A  V     +   K+  F R FR+ L +     S +IE   
Sbjct: 45  NVHQVVPIITQSSIDARAIADAVTGVDDVFGRKSQKFLRQFREKLSE-----SLVIEVLR 99

Query: 124 RIGKIDESVEIFAYMS-DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
            I +    +  F +    +G   +  +   L+  +V  +      +  + +R     V+ 
Sbjct: 100 LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFG 159

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQR----GFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
             +N L+RK     +F +  + + R     F P+  T N +++      ++ +AS +   
Sbjct: 160 QFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 219

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           + L   + +  T      + CK  K  +A     L+   + VPD + Y+ LI GL +A  
Sbjct: 220 MSLANLRMDGFTLRCFAYSLCKVGKWREAL---TLVETENFVPDTVFYTKLISGLCEASL 276

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            +E  + L                                   +RM     LPNV++YS 
Sbjct: 277 FEEAMDFL-----------------------------------NRMRATSCLPNVVTYST 301

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ G   + +L     +   +++    PS   ++SL+  +C SG     + L   M+K G
Sbjct: 302 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 361

Query: 419 LKPDAVVCSLLINGLMGD-----------ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             P  VV ++LI  + GD           A + + + +   ++ N    ++     C   
Sbjct: 362 HMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 421

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +      +   M      PD  T++ ++  + +   +  A LLF +M + GL  DV TY+
Sbjct: 422 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 481

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++    K   I      F  M   G  P++  Y  L++  +K   +  A +LF  +   
Sbjct: 482 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 541

Query: 588 GLEPDIITYNTIICGYC 604
           G  P+I+TY+ +I G+C
Sbjct: 542 GCLPNIVTYSALIDGHC 558



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 165/435 (37%), Gaps = 102/435 (23%)

Query: 26  HISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDV 82
           H    Q  +A  I   +  + +      +FK   +    PN+     L+    +S   + 
Sbjct: 557 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 616

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAY 137
           A  + D M ++                  GC+     Y  LI+   ++GK+DE+ E+   
Sbjct: 617 ARKLLDAMSME------------------GCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 658

Query: 138 MSDMG----IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGV 193
           MS+ G    +Y    L+ R         +     K+          +Y  +++GL + G 
Sbjct: 659 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 718

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
            + A+ + + + ++G  PN+VT   ++    + G+I     L + +   G  PN VT+  
Sbjct: 719 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 778

Query: 254 LINAFCKEAKLEKAFQLYNLMMEM------------------------------------ 277
           LI+  CK   L+ A   +NL+ EM                                    
Sbjct: 779 LIDHCCKNGALDVA---HNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD 835

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           D  P L +Y +LID L KA RL    E+ L  L+     +V  FS+ +  Y         
Sbjct: 836 DTAPFLSVYRLLIDNLIKAQRL----EMALRLLE-----EVATFSATLVDYSS------- 879

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
                            +Y+ LI+ LC   ++  A  LF ++  + + P + ++ SLI G
Sbjct: 880 -----------------TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 922

Query: 398 FCKSGKLRDGFSLYD 412
             ++ K+ +   L D
Sbjct: 923 LFRNSKISEALLLLD 937


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 224/438 (51%), Gaps = 30/438 (6%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C YE     L+R G  E A+ + ++   +  +P+ +T   +++ LC  G++  A SL++ 
Sbjct: 95  CFYE----ALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEE 150

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           ++  G +P V+T   L+NA CK   LE A + +    +M  +P    ++ILIDGLF+A R
Sbjct: 151 MVDRGLRPVVLTCKFLLNALCKSGNLELALRYFE---KMSSIPCAATWTILIDGLFRAIR 207

Query: 299 LKEG----NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + E      E+  TA+          ++ V++  V  G V  A    +R+L    +P + 
Sbjct: 208 VDEACYYFEEMKHTAIPNNW-----TYTVVINGLVKAGKVAEA----ERVLQEMPVPTLA 258

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ +I G C+ G + +A  L   +  +  +   LTY++LI G C+  ++   + L + M
Sbjct: 259 NYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEM 318

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT--LIPNLFIFNTLMDGCCRLK 467
                 PD     +LI GL     + +A R    ++R      PN+  +NTL+DG  +  
Sbjct: 319 KSNDFVPDIFTYDILIAGLCRAKRLSEA-RDLLGTLRNEDDCTPNVVSYNTLIDGFSKAA 377

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  D  +LF+ M      PDV+T++ LIRG+ + G  S A     +M+ + + P V  YS
Sbjct: 378 RVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYS 437

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL-DAALKLFGQLTD 586
           ++I GL +   +     +F  M  NG  P++A+YN L+  L K   L DA L++  ++T+
Sbjct: 438 SVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRV-KEMTE 496

Query: 587 RGLEPDIITYNTIICGYC 604
           RG  PD +TY T+I G C
Sbjct: 497 RGCSPDGVTYGTLIVGLC 514



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 148/580 (25%), Positives = 264/580 (45%), Gaps = 40/580 (6%)

Query: 38  ILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKT 97
           +L  L K+ N   A+++F+   +   +     LI  L ++   D A + F++M       
Sbjct: 166 LLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEM------- 218

Query: 98  YNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMS--DMGIYLSPDLVQRLMS 155
                  + +       Y+ +I   V+ GK+ E+  +   M    +  Y S      ++ 
Sbjct: 219 -------KHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTS------VIG 265

Query: 156 CLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
               +  +G+ Y L   M+ KG+      Y  L++G  R   I+ A+ +  ++    FVP
Sbjct: 266 GHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVP 325

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQL 270
           +I T + ++  LC   ++  A  L   L       PNVV+++TLI+ F K A++  A+QL
Sbjct: 326 DIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQL 385

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           +  M+     PD++ YS LI GL  AGR  E +  L   + + +   V V+SSV+     
Sbjct: 386 FLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCR 445

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G++  A   +D M+  G  PN+  Y+ LI GLC+ GRL +A     ++  R   P  +T
Sbjct: 446 AGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVT 505

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI 450
           Y +LI G C+  +  +   LY   +++G++     C+++I      +LR   Q+ R+  +
Sbjct: 506 YGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIA-----SLRCLEQAQRVLRV 560

Query: 451 -------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                  P  F + T+++  C+     +  +L   M    IKPD  T   L+  +  Q  
Sbjct: 561 VLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDK 620

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYN 562
              A+    +M++ G  P V TYS +++ LFK GK     + + +L+      PD   Y 
Sbjct: 621 AVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYV 680

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            L+     +  ++ A  +  +L  +     I+ YNT++ G
Sbjct: 681 GLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKG 720



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 147/600 (24%), Positives = 269/600 (44%), Gaps = 65/600 (10%)

Query: 46  NNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFR 105
            N   A+ FF W     +  +    +H            + F + +I+ G+    +RLF+
Sbjct: 68  KNGESAMVFFGWAG---TRQDFRHTVHTY----------NCFYEALIRTGQCEEAYRLFK 114

Query: 106 D----SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           +     L      Y  LI      GK+  +  ++  M D G+       + L++ L  S 
Sbjct: 115 EKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSG 174

Query: 162 SVG---QYYK-----------------LCRAMRGKGFC---------------VYEFLMN 186
           ++    +Y++                 L RA+R    C                Y  ++N
Sbjct: 175 NLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVIN 234

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           GL++ G +  A     +V+Q   VP +     ++   C  G +G A  L + +   G + 
Sbjct: 235 GLVKAGKVAEA----ERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQG 290

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           + +T++TLI+  C+  ++++A++L   M   D VPD+  Y ILI GL +A RL E  +LL
Sbjct: 291 DNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLL 350

Query: 307 LTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
            T  +      +VV +++++D +     V  A Q +  M+  G  P+V++YS LI+GLC 
Sbjct: 351 GTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCN 410

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            GR  EA     +++ +++ P +  YSS+I G C++G+L    +++D+M+  G +P+  V
Sbjct: 411 AGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAV 470

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            + LI GL     + DA     +       P+   + TL+ G CR  R  +   L++   
Sbjct: 471 YNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSL 530

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              I+   I+ T     IAS   L  A  +   +L  G +P    Y+ +I  L K  N++
Sbjct: 531 EQGIE---ISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLA 587

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               + + M   G+ PD +  + L+  + ++     A+    ++   G +P + TY+T++
Sbjct: 588 EARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLL 647



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 143/291 (49%), Gaps = 12/291 (4%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           V  ++   +A +  G    A + +        +P+ I+Y ILI+GLC  G+L  AC L+ 
Sbjct: 90  VHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYE 149

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-- 435
           +++ R L P +LT   L++  CKSG L      ++ M      P A   ++LI+GL    
Sbjct: 150 EMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS---IPCAATWTILIDGLFRAI 206

Query: 436 --DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             D   ++F+ ++ T IPN + +  +++G  +  +  +  ++   M +    P +  +T 
Sbjct: 207 RVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPV----PTLANYTS 262

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I G    G +  A  L   M ++G   D +TY+ +IHG  + + I     + + M+ N 
Sbjct: 263 VIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSND 322

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR-GLEPDIITYNTIICGY 603
             PDI  Y++L+  L +   L  A  L G L +     P++++YNT+I G+
Sbjct: 323 FVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGF 373



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 13/261 (4%)

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F   V +Y+   + L + G+  EA  LF +   + L P  +TY  LI G C  GKL+   
Sbjct: 86  FRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLAC 145

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           SLY+ M+ RGL+P  + C  L+N L        ALR+F    +M+ IP    +  L+DG 
Sbjct: 146 SLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYF---EKMSSIPCAATWTILIDGL 202

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            R  R  +    F  M    I P+  T+TV+I G+   G ++ A  +  +M      P +
Sbjct: 203 FRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEM----PVPTL 257

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
             Y+++I G  K  ++    H+ + M+R G   D   YN L++   +   +D A +L  +
Sbjct: 258 ANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEE 317

Query: 584 LTDRGLEPDIITYNTIICGYC 604
           +      PDI TY+ +I G C
Sbjct: 318 MKSNDFVPDIFTYDILIAGLC 338



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/464 (20%), Positives = 183/464 (39%), Gaps = 76/464 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ + +  +++++ ++F  M   G +  PD+V                        
Sbjct: 366 YNTLIDGFSKAARVNDAYQLFLEMVTAGQH--PDVV------------------------ 399

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+ GL   G    A     +++ +  +P +   + ++  LC  G++  AS+
Sbjct: 400 -----TYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAAST 454

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +FD ++  G +PN+  +++LI   CK  +L  A      M E    PD + Y  LI GL 
Sbjct: 455 VFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLC 514

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           +  R  E  +L + +L++G+++     + V+ +   +    R ++    +L  G  P   
Sbjct: 515 RWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRV---VLATGNSPTAF 571

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ +I+ LC++  L EA  L   ++   ++P   T  +L+   C+  K     +  + M
Sbjct: 572 FYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEM 631

Query: 415 IKRGLKPDAVVCSLLINGLMG--------------------------------------- 435
           ++ G KP     S L+N L                                         
Sbjct: 632 VRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQ 691

Query: 436 -DALRFFFQSVRMTL-IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
            +  R   Q ++    I ++  +NTL+ G  R +      +L   M       +  T  +
Sbjct: 692 VEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNI 751

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
           LI+G    G    A+ +  +M K+ LTP       ++  L + +
Sbjct: 752 LIQGFCRLGQTDRAVRVLSEM-KKVLTPSAAIIKFLVDELARAE 794



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 10/200 (5%)

Query: 405 RDGFSL-YDNMIKRGLKPDAVVCSLLINGLMGDALRFF-FQSVRMTLIPNLFIFNTLMDG 462
           R GFS+ ++  + + L    V+  ++ NG    A+ FF +   R      +  +N   + 
Sbjct: 44  RLGFSMKWNGQLSQRLV--GVILHMVKNG--ESAMVFFGWAGTRQDFRHTVHTYNCFYEA 99

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             R  +  +  +LF       + PD IT+ +LIRG+ + G L  A  L+ +M+ RGL P 
Sbjct: 100 LIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPV 159

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V+T   +++ L K  N+ + L  F   E+    P  A + +L++ L +   +D A   F 
Sbjct: 160 VLTCKFLLNALCKSGNLELALRYF---EKMSSIPCAATWTILIDGLFRAIRVDEACYYFE 216

Query: 583 QLTDRGLEPDIITYNTIICG 602
           ++    + P+  TY  +I G
Sbjct: 217 EMKHTAI-PNNWTYTVVING 235


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/581 (25%), Positives = 276/581 (47%), Gaps = 29/581 (4%)

Query: 46  NNPTPAIQFFKWTHN----CVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFF 101
            +P  A++FF+W       C+++ +   L+H+L  + M    ++ F K +I   +    F
Sbjct: 107 QDPKLALKFFRWAKTKFGFCLTTESYCLLVHILFYARMY-FDANFFLKELISSRRILPGF 165

Query: 102 RLFR----------DSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
            +F              G F   +S  IE    +G ++E+ + F+ M+   ++       
Sbjct: 166 DVFEVLWSTRNVCVPGFGVFDALFSVFIE----LGMLEEAGQCFSRMTRFRVFPKARSCN 221

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQR 207
             +  L  +       K  R M G G       Y  ++  + ++G +  A  +  Q+ Q 
Sbjct: 222 AFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQM 281

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P+IVT N ++      G +  +  LF+ +  VG +P+V+T++ LIN FCK  ++ KA
Sbjct: 282 GLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKA 341

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           F   + M    L P+++ YS LID L K   L++  + LL     GL  +   ++S++DA
Sbjct: 342 FHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDA 401

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G +  A++  D ML      NV++Y+ L+ GLC++GR++EA  LF  ++   + P+
Sbjct: 402 NCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPN 461

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQ 443
           L TY++L+ G  K+ ++ +   L   + ++ +KPD ++   +I GL      +   F   
Sbjct: 462 LKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMS 521

Query: 444 SVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
            ++   I  N  I+   MD   +  +  + + L   M    ++  ++T  VLI G+  +G
Sbjct: 522 EMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKG 581

Query: 503 SLSSAILLFFQMLKRGLTP-DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
            +  AI  F +M    L P +V   +A+I GL K   I     +F  M+   + PD   Y
Sbjct: 582 LVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAY 641

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             L++  +K  +   AL +  ++++ G+E D+  Y +++ G
Sbjct: 642 TALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWG 682



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 199/430 (46%), Gaps = 42/430 (9%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPK--PNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           N  LK L  + +I     +F+VL        P    F  L + F +   LE+A Q ++ M
Sbjct: 149 NFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRM 208

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
               + P     +  +  L K G+    N+     +  G+   V  ++ ++      GD+
Sbjct: 209 TRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDM 268

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A   + +M   G  P++++Y+ LI G  + G L E+  LF ++     EP ++TY++L
Sbjct: 269 VTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNAL 328

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           I+ FCK  ++   F     M   GLKP+ V  S LI+ L     +  A++F     R+ L
Sbjct: 329 INCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGL 388

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            PN F + +L+D  C+    +D +KL   M    +  +V+T+T L+ G+  +G +  A  
Sbjct: 389 SPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAED 448

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML- 568
           LF  M+K G+TP++ TY+A++HG  K K +   L + K ++   + PD+ +Y  ++  L 
Sbjct: 449 LFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLC 508

Query: 569 ----IKECN---------------------LDA---------ALKLFGQLTDRGLEPDII 594
               ++EC                      +DA         AL L  ++ D G+E  I+
Sbjct: 509 SQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIV 568

Query: 595 TYNTIICGYC 604
           T+  +I G C
Sbjct: 569 TFCVLIDGLC 578



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 152/286 (53%), Gaps = 7/286 (2%)

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A  G GD+    + +  M+  G   +V +Y+I+I  +C++G +V A  LF Q+    L P
Sbjct: 228 AKTGKGDLSN--KFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTP 285

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
            ++TY+SLIDG+ K G L + F L++ M   G +PD +  + LIN       M  A  F 
Sbjct: 286 DIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFL 345

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +     L PN+  ++TL+D  C+       +K  + M    + P+  T+T LI      
Sbjct: 346 HEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKA 405

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G LS A+ L  +ML+  +  +V+TY+ ++ GL K   +     +F+ M + GV P++  Y
Sbjct: 406 GYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTY 465

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             L++  IK   ++ AL+L  ++ ++ ++PD++ Y TII G CS N
Sbjct: 466 TALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQN 511



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 203/450 (45%), Gaps = 49/450 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ Y ++G +DES  +F  M D+G    PD++    L++C      + + +     
Sbjct: 290 YNSLIDGYGKLGLLDESFCLFEEMKDVGC--EPDVITYNALINCFCKYEQMPKAFHFLHE 347

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G       Y  L++ L ++ +++ A      + + G  PN  T   ++   C  G 
Sbjct: 348 MKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGY 407

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  L D +L V    NVVT++TL++  CKE ++ +A  L+  M++  + P+L  Y+ 
Sbjct: 408 LSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTA 467

Query: 289 LIDGLFKAGRLK----------------------------------EGNELLLTALDR-G 313
           L+ G  K  R++                                  E  E +++ +   G
Sbjct: 468 LVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACG 527

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++ + V+++  MDAY   G    A+     M + G    ++++ +LI GLC++G + EA 
Sbjct: 528 IRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAI 587

Query: 374 GLFGQVLIRRLEPS-LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             F ++    L+P+ +   ++LIDG CK+  +     L+D M  + + PD +  + LI+G
Sbjct: 588 DYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDG 647

Query: 433 LMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
            +      +AL    +   + +  +L  + +L+ G  +             M    I PD
Sbjct: 648 NLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPD 707

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            I    L+R     GS+  AI L  ++LK+
Sbjct: 708 EILCIRLLRKYYELGSIDEAIELHDELLKK 737



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G L  A   F +M +  + P   + +A ++ L K     +    F+ M   G+A  +  Y
Sbjct: 196 GMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTY 255

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
           N+++  + KE ++  A  LF Q+   GL PDI+TYN++I GY  L   L+D  F
Sbjct: 256 NIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLG--LLDESF 307


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 248/534 (46%), Gaps = 45/534 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++    + G+   + ++   M   GI         L+  L  +N   + Y L + MR
Sbjct: 13  YNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMR 72

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +     EF    L+NGL+++  I  A  +  +++     PN VT N ++   C  G   
Sbjct: 73  KRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFE 132

Query: 231 NASSLFDVLLLVGPKPNVV-----------------------------------TFSTLI 255
            A  L DV+   G +P+ V                                    ++ +I
Sbjct: 133 QALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMI 192

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +  CK   L+++ QL ++M +    PD+I +S+LI+G  KAG++K   E++      GL 
Sbjct: 193 DGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLA 252

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            + V++++++      GD+  A + Y  M   G   +    ++LI  LC+ GR+ EA   
Sbjct: 253 PNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDF 312

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
              +    L P+ +T+  +I+G+   G     FS++D MIK G  P       L+ GL  
Sbjct: 313 MRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCK 372

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              + +A +  ++   +    +  I+NT++   C+  + +D V LF  M  +N+ PD  T
Sbjct: 373 GGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHT 432

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRG-LTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           + +++ G++ +G +  A+L F + L RG L+P+ + Y+++  GLFK    +   ++++ M
Sbjct: 433 YAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEM 492

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           E  G+ PD    N +L+   +   ++   KLF ++    L P + TYN ++ GY
Sbjct: 493 EHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGY 546



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 148/587 (25%), Positives = 268/587 (45%), Gaps = 30/587 (5%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
           N ++ +L K N         K     + +PN      LI+ L++      A+ VF++M++
Sbjct: 49  NMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLM 108

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ- 151
                         +L      Y+ LI+ +   G  ++++ +   M   G  L PD V  
Sbjct: 109 L-------------NLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKG--LRPDEVNY 153

Query: 152 -RLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L+S L           L   +R  G  V    Y  +++GL + G+++ +  +   + +
Sbjct: 154 GALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFK 213

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P+I+T + ++   C  G+I NA  +   +   G  PN V ++TLI   CK+  + +
Sbjct: 214 DGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITE 273

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           AF+ Y  M       D  I ++LI  L +AGR+ E  + +       L  + + F  +++
Sbjct: 274 AFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIIN 333

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y  +GD  +A   +D M+  G  P+  +Y  L+KGLC+ G L EA  L  ++       
Sbjct: 334 GYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAV 393

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
               Y++++   CK GKL D  +L+  M++  + PD+   ++++ GL     M  AL FF
Sbjct: 394 DTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFF 453

Query: 442 FQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
            +++ R TL PN  ++ +L DG  ++ ++     ++  M    I PD I    ++ G + 
Sbjct: 454 EKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSR 513

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G +     LF +M    LTP + TY+ ++HG  K K++      + +M R G++PD   
Sbjct: 514 MGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLT 573

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            + ++  L K   LD   K+  ++       D +T N +I   C  +
Sbjct: 574 CHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETD 620



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 245/549 (44%), Gaps = 45/549 (8%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           ++F+  L      Y+ LI N  + G I E+   +A M+  G  +   +   L+S L  + 
Sbjct: 245 KMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAG 304

Query: 162 SVGQYYKLCRAMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            V +     R M           ++ ++NG    G    AF M  ++I+ G  P+  T  
Sbjct: 305 RVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYG 364

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            +LK LC  G +  A  L   L  +    +   ++T+++  CK  KL  A  L+  M++ 
Sbjct: 365 SLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQF 424

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYVGIGDVGR 336
           +++PD   Y+I++ GL + G++         AL RG L  + V+++S+ D    +G    
Sbjct: 425 NVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNA 484

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A   Y+ M + G  P+ I+ + ++ G  + G++ +   LF ++    L PSL TY+ L+ 
Sbjct: 485 ASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLH 544

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA-LRFFFQSVRMTLIPNLFI 455
           G+ K   L      Y+ M + G+ PD + C  +I GL     L   F+ ++  ++ +  +
Sbjct: 545 GYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLV 604

Query: 456 ----FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
                N L+   C   +      L  +  +  I PDV T+  +  G+    +L  + LL 
Sbjct: 605 DQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLL 664

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA---------------- 555
             ML+RG+TP    Y ++I+G+ +  +I     +   ME  GV+                
Sbjct: 665 HDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQC 724

Query: 556 -------------------PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
                              P +A +  L++ML K+  L  ALKL G++   G++ D++ Y
Sbjct: 725 GKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAY 784

Query: 597 NTIICGYCS 605
           N +I G C+
Sbjct: 785 NVLISGLCA 793



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 186/435 (42%), Gaps = 40/435 (9%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G+VP IVT N IL   C  G+   AS L D +   G + +V T++ LI+  CK  +  K 
Sbjct: 5   GYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKG 64

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           + L   M +  + P+   Y+ LI+GL K  ++     +    L   L  + V ++ ++D 
Sbjct: 65  YLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDG 124

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +   G+  +A++  D M   G  P+ ++Y  L+ GL +  +   A  L  ++ +  +   
Sbjct: 125 HCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVG 184

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-------------- 433
              Y+++IDG CK G L +   L D M K G  PD +  S+LING               
Sbjct: 185 YRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVIC 244

Query: 434 --------------------------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
                                     + +A R +    R     + FI N L+   CR  
Sbjct: 245 KMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAG 304

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  +       M   ++ P+ IT   +I G    G    A  +F +M+K G  P   TY 
Sbjct: 305 RVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYG 364

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           +++ GL KG N+     +   +     A D  IYN +L+   K   L  A+ LFG++   
Sbjct: 365 SLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQF 424

Query: 588 GLEPDIITYNTIICG 602
            + PD  TY  I+ G
Sbjct: 425 NVLPDSHTYAIILAG 439



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 164/336 (48%), Gaps = 5/336 (1%)

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           VP ++ Y+ +++   K GR K  ++L+     +G++ DV  ++ ++D         +   
Sbjct: 7   VPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYL 66

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
              +M      PN  +Y+ LI GL ++ ++  A  +F ++L+  L P+ +TY+ LIDG C
Sbjct: 67  LLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHC 126

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMT-LIPNLF 454
             G       L D M  +GL+PD V    L++GL      D  +   + +RM+ ++    
Sbjct: 127 DCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYR 186

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +  ++DG C+     ++++L  +M      PD+IT +VLI G    G + +A  +  +M
Sbjct: 187 AYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKM 246

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            K GL P+ + Y+ +I+   K  +I+     +  M R G   D  I NVL++ L +   +
Sbjct: 247 FKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRV 306

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
             A      ++   L P+ IT++ II GY  L   L
Sbjct: 307 AEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDAL 342



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 198/429 (46%), Gaps = 10/429 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY-----KL 169
           Y+ ++    + GK+ ++V +F  M    +         +++ L     +          L
Sbjct: 398 YNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKAL 457

Query: 170 CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            R        +Y  L +GL + G    A +++ ++  +G  P+ +  N +L      G++
Sbjct: 458 ARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKM 517

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
                LF  +      P++ T++ L++ + K+  L K  + YN+M  M + PD +    +
Sbjct: 518 EKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSI 577

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I GL K+G L  G ++L   +     +D +  + ++        +G+A    +     G 
Sbjct: 578 ILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGI 637

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
           +P+V +Y+ +  GL +   L E+  L   +L R + P+   Y SLI+G C+ G ++  F 
Sbjct: 638 IPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFR 697

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L D M   G+    V  S ++ GL     + +A+      ++  LIP +  F TLM   C
Sbjct: 698 LKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLC 757

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  + ++ +KL   M +Y +K DV+ + VLI G+ + G   +A  L+ +M +RGL P+  
Sbjct: 758 KKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTT 817

Query: 525 TYSAIIHGL 533
           TY  +I  +
Sbjct: 818 TYCTLIDAI 826



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 133/266 (50%), Gaps = 5/266 (1%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M   G++P +++Y+ ++   C++GR   A  L  ++  + +E  + TY+ LID  CK+ +
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNT 458
              G+ L   M KR + P+    + LINGLM     G A R F + + + L PN   +N 
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+DG C        ++L  +M    ++PD + +  L+ G++       A  L  ++   G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           +      Y+A+I GL K   +   L +  +M ++G +PDI  ++VL+N   K   +  A 
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYC 604
           ++  ++   GL P+ + Y T+I   C
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSC 266



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 182/378 (48%), Gaps = 19/378 (5%)

Query: 100 FFR--LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           FF   L R +L      Y+ L +   ++G+ + +  I+  M   GI  +PD +   ++ +
Sbjct: 452 FFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGI--NPDTIA--INAV 507

Query: 158 VDSNS-VGQ-------YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +D  S +G+       + K+           Y  L++G  +K  +      +  + + G 
Sbjct: 508 LDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGI 567

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P+ +TC+ I+  LC +G +     +   +++     + +T + LI   C+  K+ KAF 
Sbjct: 568 SPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFD 627

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L N+   + ++PD+  Y+ +  GL +A  L+E + LL   L+RG+      + S+++   
Sbjct: 628 LLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMC 687

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            +GD+  A +  D M   G     ++ S +++GL Q G++ EA  +   +L +RL P++ 
Sbjct: 688 RMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVA 747

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GDALRFFFQSVRM 447
           T+++L+   CK  KL +   L   M   G+K D V  ++LI+GL   GDAL  F     M
Sbjct: 748 TFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEM 807

Query: 448 T---LIPNLFIFNTLMDG 462
               L PN   + TL+D 
Sbjct: 808 KERGLWPNTTTYCTLIDA 825



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 17/258 (6%)

Query: 74  LLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVE 133
           L +S M DV   +  KM+++            D+L D     + LI N     K+ ++ +
Sbjct: 581 LCKSGMLDVGFKMLKKMIME------------DTLVD-QLTLNMLITNSCETDKMGKAFD 627

Query: 134 IFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLL 189
           +    + +GI    +    + + L  ++++ + + L   M  +G       Y  L+NG+ 
Sbjct: 628 LLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMC 687

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           R G I+ AF +  ++   G     V  + +++ L   G++  A  + D +L     P V 
Sbjct: 688 RMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVA 747

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           TF+TL++  CK+AKL +A +L   M    +  D++ Y++LI GL   G       L    
Sbjct: 748 TFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEM 807

Query: 310 LDRGLKLDVVVFSSVMDA 327
            +RGL  +   + +++DA
Sbjct: 808 KERGLWPNTTTYCTLIDA 825



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 31/59 (52%)

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           ME +G  P I  YN +LN   K+    AA  L  ++  +G+E D+ TYN +I   C  N
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNN 59


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 238/502 (47%), Gaps = 13/502 (2%)

Query: 101 FRLFRDSLGDFGCDYSFLIENYV-----RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS 155
           F + R+   DFG   S    N V     + GK+  +++ F  +    + +S      L++
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVR-RSMPVSAATFSILIN 232

Query: 156 CLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
            LV +  + Q + L +     G  +    Y  ++N L +   I+ A  +  ++   G  P
Sbjct: 233 GLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTP 292

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
            I T N +L  LC  G++  A  L   ++  G  P+VVT+++LI+   KE +  +A++L+
Sbjct: 293 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 352

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M    L  D + Y+ LI GL + G++ + + +  T    G   DVV  S+++D     
Sbjct: 353 KEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 412

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G +G AV+ +  M   G  PN + YS LI GLC+  ++  A  +  Q+      P  +TY
Sbjct: 413 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 472

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIP 451
           + LIDG CKSG +    + +D M++ G KPD    ++LI+GL           V   +  
Sbjct: 473 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS 532

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           + F++++L+DG C+  +      LF  M    +  +  T T LI  +     +  A+ LF
Sbjct: 533 SRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLF 591

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             + K G+ P    Y++II  L K   ++ G  +++ M R    PD   YN LLN +I  
Sbjct: 592 NAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMTR-WWKPDRVTYNALLNGMIGA 649

Query: 572 CNLDAALKLFGQLTDRGLEPDI 593
             +D A   + ++T RG  P +
Sbjct: 650 NRMDRAHYYYLEMTGRGYVPPV 671



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 220/465 (47%), Gaps = 37/465 (7%)

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL----RKGVIENAFHM 200
           +S D V ++  CL D++   + ++ C +    GF       N LL    R      A ++
Sbjct: 83  ISTDAVVKIFQCLKDADLAWELFQ-CLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNL 141

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF-DVLLLVGPKPNVVTFSTLINAFC 259
            +  +   F P++ T N ++   C+  +   A ++  ++    G  P++ T + +++  C
Sbjct: 142 LKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLC 201

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K  K+  A   +   +   +      +SILI+GL KAG + + + L       G  +D+ 
Sbjct: 202 KSGKVLAAMDHFE-AVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIH 260

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            ++++++       +  AV   +++   G  P + +Y+ L+ GLC+ GRL EA  L  ++
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 320

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR 439
           +     P ++TY+SLIDG  K  +  + + L+  M  RGL  D V  + LI GL+     
Sbjct: 321 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLL----- 375

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                 +   IP                       ++  M  +   PDV+T + +I G++
Sbjct: 376 ------QTGKIPQ-------------------ASSVYKTMTSHGCVPDVVTLSTMIDGLS 410

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G + +A+ +F  M  RGL P+ + YSA+IHGL K + +   L M   M++    PD  
Sbjct: 411 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 470

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            YN+L++ L K  +++AA   F ++ + G +PD+ TYN +I G C
Sbjct: 471 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLC 515



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 215/469 (45%), Gaps = 51/469 (10%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  +++GL + G +  A   H + ++R    +  T + ++  L   G +  A SL    
Sbjct: 192 THNLVLHGLCKSGKVLAAMD-HFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQET 250

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G   ++ T++ ++N   K  K+++A  L   +      P +  Y+ L++GL K GRL
Sbjct: 251 TTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRL 310

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD---RMLNGGFLPNVISY 356
           +E  +LL   +D G   DVV ++S++D   G+G   R+ + Y     M + G   + + Y
Sbjct: 311 EEAIDLLRKIVDNGCTPDVVTYTSLID---GLGKEKRSFEAYKLFKEMASRGLALDTVCY 367

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI+GL Q G++ +A  ++  +      P ++T S++IDG  K+G++     ++ +M  
Sbjct: 368 TALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 427

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           RGL P+ VV S LI+GL     M  AL    Q  +    P+   +N L+DG C+      
Sbjct: 428 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 487

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
               F  M     KPDV T+ +LI G+   G+  +A  +   M     +     YS+++ 
Sbjct: 488 ARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVD 542

Query: 532 GLFKGKNISVGLHMFKLMERNGVA---------------------------------PDI 558
           GL K   +  G  +F  MER+GVA                                 P  
Sbjct: 543 GLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHP 602

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             YN +++ LIK   ++    ++ ++T R  +PD +TYN ++ G    N
Sbjct: 603 YAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGAN 650



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 2/157 (1%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGM-YNIKPDVITHTVLIRGIASQGSLSSAIL 509
           P++  +N L+ G C  +   +   +   M   + + P + TH +++ G+   G + +A +
Sbjct: 152 PDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAA-M 210

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
             F+ ++R +     T+S +I+GL K   +     + +    NG   DI  Y  ++N L 
Sbjct: 211 DHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLA 270

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           K   +  A+ L  ++T  G  P I TYN ++ G C +
Sbjct: 271 KNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKM 307


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 254/537 (47%), Gaps = 51/537 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV-DSNSVGQYYKLCRAM 173
           Y+ L+  Y + G+   + ++   M+  GI +        +  L  DS S   Y  L R  
Sbjct: 213 YNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMR 272

Query: 174 RGKGF---CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           R   +     Y  L++G +R+G IE A  +  ++     +PN +T N ++   C  G IG
Sbjct: 273 RNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIG 332

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAF-------------------------------- 258
            A  L DV++  G +PN VT+  L+N                                  
Sbjct: 333 EALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMI 392

Query: 259 ---CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
              CK   LE+A QL + M+++ + PD++ +S+LI+G F+ G++    E++      GL 
Sbjct: 393 DGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLV 452

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            + +++S+++  Y  +G +  A+  Y  M + G + +  + ++L+   C+ G+L EA   
Sbjct: 453 PNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYF 512

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLI 430
              +    L+P+ +T+  +I+G+  SG     FS++D M   G  P       ++  L I
Sbjct: 513 MNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCI 572

Query: 431 NGLMGDALRFFFQSVRMTLIPNL---FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
            G + +AL+FF    R+  IPN     IFNT +   CR    +D + L   M   +  PD
Sbjct: 573 GGHINEALKFFH---RLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPD 629

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRG-LTPDVITYSAIIHGLFKGKNISVGLHMF 546
             T+T LI G+  +G + +A+LL  + +++G L+P+   Y++++ GL K  +    L++F
Sbjct: 630 NFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIF 689

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           + M    V PD   +NV+++   ++        +   +  + L  ++ TYN ++ GY
Sbjct: 690 EEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGY 746



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 213/429 (49%), Gaps = 5/429 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ L+   LR  ++ +A      +  RG  P++ TCN +L  L    ++    S F  +
Sbjct: 107 VFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGM 166

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G  P+V TF+ L+NA C+  K + A  L   M E  + P  + Y+ L++   K GR 
Sbjct: 167 LAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRY 226

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           K  ++L+     +G+ +DV  ++  +D         +      RM      PN I+Y+ L
Sbjct: 227 KAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTL 286

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G  ++G++  A  +F ++ +  L P+ +TY++LI G C +G + +   L D M+  GL
Sbjct: 287 ISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGL 346

Query: 420 KPDAVVCSLLINGLMGDA----LRFFFQSVRMTLIPNLFI-FNTLMDGCCRLKRATDTVK 474
           +P+ V    L+NGL  +A    +    + +RM  +    I +  ++DG C+     + V+
Sbjct: 347 RPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQ 406

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M   ++ PDV+T +VLI G    G +++A  +  +M K GL P+ I YS +I+   
Sbjct: 407 LLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYC 466

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K   +   L+ + +M  +G   D    NVL+    +   L+ A      ++  GL+P+ +
Sbjct: 467 KMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSV 526

Query: 595 TYNTIICGY 603
           T++ II GY
Sbjct: 527 TFDCIINGY 535



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 248/554 (44%), Gaps = 51/554 (9%)

Query: 100 FFRLFRDSLGDFGC----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS 155
           F+  F+  L    C     ++ L+      GK   +  +   M + G+Y +      L++
Sbjct: 159 FWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLN 218

Query: 156 CLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
                       +L   M  KG     C Y   ++ L R       + + +++ +    P
Sbjct: 219 WYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYP 278

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           N +T N ++      G+I  A+ +FD + L    PN +T++TLI   C    + +A +L 
Sbjct: 279 NEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLM 338

Query: 272 NLMMEMDLVPDLII-----------------------------------YSILIDGLFKA 296
           ++M+   L P+ +                                    Y+ +IDGL K 
Sbjct: 339 DVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKN 398

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G L+E  +LL   L   +  DVV FS +++ +  +G +  A +   +M   G +PN I Y
Sbjct: 399 GMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILY 458

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           S LI   C+ G L EA   +  +          T + L+  FC+ GKL +     ++M +
Sbjct: 459 STLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSR 518

Query: 417 RGLKPDAVVCSLLINGL--MGDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATD 471
            GL P++V    +ING    GDAL+ F    +M      P+LF +  L+ G C      +
Sbjct: 519 MGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINE 578

Query: 472 TVKLFM-LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
            +K F  L  + N   +VI +T L     S G+LS AI L  +M+     PD  TY+ +I
Sbjct: 579 ALKFFHRLRCIPNAVDNVIFNTKLTSTCRS-GNLSDAIALINEMVTNDFLPDNFTYTNLI 637

Query: 531 HGLF-KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            GL  KGK ++  L   K +E+  ++P+ A+Y  L++ L+K  +  AAL +F ++ ++ +
Sbjct: 638 AGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDV 697

Query: 590 EPDIITYNTIICGY 603
           EPD + +N II  Y
Sbjct: 698 EPDTVAFNVIIDQY 711



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 147/619 (23%), Positives = 264/619 (42%), Gaps = 97/619 (15%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
           +VA+ VFD+M        + F L  +S+      Y+ LI  +   G I E++ +   M  
Sbjct: 297 EVATKVFDEM--------SLFNLLPNSI-----TYNTLIAGHCTTGNIGEALRLMDVMVS 343

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIEN 196
            G+  +      L++ L  +   G    +   MR  G  V    Y  +++GL + G++E 
Sbjct: 344 HGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEE 403

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  +   +++    P++VT + ++      G+I NA  +   +   G  PN + +STLI 
Sbjct: 404 AVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIY 463

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLK 315
            +CK   L++A   Y +M     V D    ++L+    + G+L+E  E  +  + R GL 
Sbjct: 464 NYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEA-EYFMNHMSRMGLD 522

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC----------- 364
            + V F  +++ Y   GD  +A   +D+M + G  P++ +Y  L+KGLC           
Sbjct: 523 PNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKF 582

Query: 365 ------------------------QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
                                   + G L +A  L  +++     P   TY++LI G CK
Sbjct: 583 FHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCK 642

Query: 401 SGKLRDGFSLYDNMIKRGL-KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLF 454
            GK+     L    I++GL  P+  V + L++GL+       AL  F + +   + P+  
Sbjct: 643 KGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTV 702

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            FN ++D   R  + +    +   M   N+  ++ T+ +L+ G A + +++   +L+  M
Sbjct: 703 AFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDM 762

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMF--------------------KLMERNG- 553
           ++ G  PD  ++ ++I G  + K+  V + +                     K  ERN  
Sbjct: 763 IRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEM 822

Query: 554 --------------VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                         V P++  YN L N LI+  +   A ++   L + G  P    Y T+
Sbjct: 823 KKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITL 882

Query: 600 ICGYCSLNSCLIDGYFKSQ 618
           I G C + +  I G  K Q
Sbjct: 883 INGMCRVGN--IKGAMKLQ 899



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 127/550 (23%), Positives = 234/550 (42%), Gaps = 63/550 (11%)

Query: 111  FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ---------------RLMS 155
            F C+   L+  + R GK++E+     +MS MG  L P+ V                +  S
Sbjct: 491  FTCN--VLVATFCRYGKLEEAEYFMNHMSRMG--LDPNSVTFDCIINGYGNSGDALKAFS 546

Query: 156  CLVDSNSVGQYYKL-CRAMRGKGFCV-------------------------YEFLMNGLL 189
                 NS G +  L       KG C+                         +   +    
Sbjct: 547  VFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTC 606

Query: 190  RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP----- 244
            R G + +A  +  +++   F+P+  T   ++  LC  G+I  A      LLL G      
Sbjct: 607  RSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAA------LLLSGKAIEKG 660

Query: 245  --KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
               PN   +++L++   K      A  ++  M+  D+ PD + ++++ID   + G+  + 
Sbjct: 661  LLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKV 720

Query: 303  NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            N++L T   + L  ++  ++ ++  Y     + R    Y  M+  GFLP+  S+  LI G
Sbjct: 721  NDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILG 780

Query: 363  LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
             CQ      A  +   + +        T++ LI  FC+  +++  F L   M +  + P+
Sbjct: 781  YCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPN 840

Query: 423  AVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
                + L NGL+       A R     +    +P    + TL++G CR+      +KL  
Sbjct: 841  VDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQD 900

Query: 478  LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
             M    I    +  + ++RG+A+   + +AI +   ML+  + P V T++ ++H   K  
Sbjct: 901  EMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEA 960

Query: 538  NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            N++  L +  +ME   V  D+  YNVL++ L    +++AA KL+ ++  R L P+   Y 
Sbjct: 961  NVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYI 1020

Query: 598  TIICGYCSLN 607
             +I  +C+ N
Sbjct: 1021 VLIDSFCAGN 1030



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 194/407 (47%), Gaps = 6/407 (1%)

Query: 219 ILKRLCI-NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           +L R+C+ N  +G+A   F ++   G  P+V T + ++ +  KE K++  +  +  M+  
Sbjct: 110 LLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAK 169

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + PD+  ++IL++ L + G+ K    LL    + G+    V ++++++ Y   G    A
Sbjct: 170 GICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAA 229

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            Q  D M + G   +V +Y++ I  LC+  R  +   L  ++    + P+ +TY++LI G
Sbjct: 230 SQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISG 289

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPN 452
           F + GK+     ++D M    L P+++  + LI      G +G+ALR     V   L PN
Sbjct: 290 FVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPN 349

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              +  L++G  +         +   M M  ++   I++T +I G+   G L  A+ L  
Sbjct: 350 EVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLD 409

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            MLK  + PDV+T+S +I+G F+   I+    +   M + G+ P+  +Y+ L+    K  
Sbjct: 410 DMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMG 469

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            L  AL  +  +   G   D  T N ++  +C         YF + +
Sbjct: 470 YLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHM 516



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/375 (21%), Positives = 175/375 (46%), Gaps = 17/375 (4%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS----VGQYYKLC 170
            Y+ L++  ++ G    ++ IF  M +  +   PD V    + ++D  S      +   + 
Sbjct: 669  YTSLVDGLLKHGHARAALYIFEEMLNKDV--EPDTVA--FNVIIDQYSRKGKTSKVNDIL 724

Query: 171  RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
              M+ K  C     Y  L++G  ++  +   F +++ +I+ GF+P+  + + ++   C +
Sbjct: 725  STMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQS 784

Query: 227  GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
                 A  +   + L G   +  TF+ LI  FC+  +++KAF+L   M +  ++P++  Y
Sbjct: 785  KSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTY 844

Query: 287  SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            + L +GL +     + + +L   L+ G       + ++++    +G++  A++  D M  
Sbjct: 845  NALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKT 904

Query: 347  GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
             G   + ++ S +++GL    ++  A  +   +L  ++ P++ T+++L+  +CK   +  
Sbjct: 905  LGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAK 964

Query: 407  GFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMD 461
               L   M    +K D V  ++LI+GL  +     A + + +  +  L PN  I+  L+D
Sbjct: 965  ALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLID 1024

Query: 462  GCCRLKRATDTVKLF 476
              C      ++ KL 
Sbjct: 1025 SFCAGNYQIESEKLL 1039



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 32/255 (12%)

Query: 352 NVISYSILIKGLCQQGRLV-EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           N   + +LI+ +C + R+V +A   F  +  R L PS+ T + ++    K  K+   +S 
Sbjct: 104 NPAVFDLLIR-VCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSF 162

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +  M+ +G+ PD                                 FN L++  C   +  
Sbjct: 163 FKGMLAKGICPDVAT------------------------------FNILLNALCERGKFK 192

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +   L   M    + P  +T+  L+     +G   +A  L   M  +G+  DV TY+  I
Sbjct: 193 NAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFI 252

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
             L +    + G  + K M RN V P+   YN L++  ++E  ++ A K+F +++   L 
Sbjct: 253 DNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLL 312

Query: 591 PDIITYNTIICGYCS 605
           P+ ITYNT+I G+C+
Sbjct: 313 PNSITYNTLIAGHCT 327



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 116/275 (42%), Gaps = 4/275 (1%)

Query: 114  DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
             +  LI  Y +    D +++I  +++  G  +       L++   + N + + ++L + M
Sbjct: 773  SWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQM 832

Query: 174  RG----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
                       Y  L NGL+R      A  + + +++ G VP       ++  +C  G I
Sbjct: 833  NQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNI 892

Query: 230  GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
              A  L D +  +G   + V  S ++       K+E A  + +LM+EM ++P +  ++ L
Sbjct: 893  KGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTL 952

Query: 290  IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
            +    K   + +  EL        +KLDVV ++ ++      GD+  A + Y+ M     
Sbjct: 953  MHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDL 1012

Query: 350  LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
             PN   Y +LI   C     +E+  L   +  R L
Sbjct: 1013 WPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDREL 1047


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 213/423 (50%), Gaps = 16/423 (3%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIV-TCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           L+R+G +E A  +   +   G  P+    C  ++K+LC +G+   A  +     L   +P
Sbjct: 66  LVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRV-----LASCEP 118

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           +V++++ ++  +C   +L+ A +L   +  M + PD   Y+ LI GL   GR      +L
Sbjct: 119 DVMSYNAMVAGYCVTGQLDNARRL---VAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVL 175

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              L RG   DVV ++ +++A        +AV+  D M + G  P++++Y++++ G+CQ+
Sbjct: 176 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE 235

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           GR+ +A      +     EP+ ++Y+ ++ G C + +  D   L   M ++G  P+ V  
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTF 295

Query: 427 SLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           ++LI+     GL+  A+    Q  +    PN   +N ++   C+ K+    +    LM  
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 355

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
               PD++++  L+  +   G + +A+ L  Q+  +G TP +I+Y+ +I GL K      
Sbjct: 356 SGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEE 415

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L +   M   G+ PDI  Y+ + + L +E  ++ A+K F ++ D G+ P+ + YN I+ 
Sbjct: 416 ALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILL 475

Query: 602 GYC 604
           G C
Sbjct: 476 GLC 478



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 206/414 (49%), Gaps = 8/414 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++ G    G ++NA    R V      P+  T N +++ LC  G+  NA ++ D +L
Sbjct: 123 YNAMVAGYCVTGQLDNA---RRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDML 179

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+VVT++ L+ A CK +  ++A +L + M +    PD++ Y+++++G+ + GR+ 
Sbjct: 180 RRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVD 239

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +  E L +    G + + V ++ V+           A +    M   G  PNV+++++LI
Sbjct: 240 DAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLI 299

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC++G +  A  +  Q+      P+ L+Y+ ++  FCK  K+    +  + M+  G  
Sbjct: 300 SFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCY 359

Query: 421 PDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V     + +L   G +  A+    Q       P L  +NT++DG  +  +  + ++L
Sbjct: 360 PDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALEL 419

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M    ++PD+IT++ +  G+  +G +  AI  F ++   G+ P+ + Y+AI+ GL K
Sbjct: 420 LNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCK 479

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            +     + +F  M  NG  P+ + Y +L+  L  E  +  A ++  +L  RG+
Sbjct: 480 RRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 196/397 (49%), Gaps = 8/397 (2%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P++++ N ++   C+ GQ+ NA  L   + +   +P+  T++TLI   C   + + A  +
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAMPM---EPDTYTYNTLIRGLCGRGRTDNALAV 174

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
            + M+    VPD++ Y+IL++   K    K+  +LL    D+G   D+V ++ V++    
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G V  A++    + + G  PN +SY+I++KGLC   R  +A  L  ++  +   P+++T
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           ++ LI   C+ G +     + D + K G  P+++  + +++       M  A+ F    V
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 354

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
                P++  +NTL+   CR       V+L   +      P +I++  +I G+   G   
Sbjct: 355 SSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTE 414

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ L  +M+ +GL PD+ITYS I  GL +   I   +  F  ++  G+ P+  +YN +L
Sbjct: 415 EALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAIL 474

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             L K     +A+ LF  +   G  P+  TY  +I G
Sbjct: 475 LGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEG 511



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 208/437 (47%), Gaps = 7/437 (1%)

Query: 89  KMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMS-DMGIYLSP 147
           K +   G+T    R+      D    Y+ ++  Y   G++D +  + A M  +   Y   
Sbjct: 98  KKLCASGRTAEARRVLASCEPDV-MSYNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTYN 156

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L++ L       N++     + R         Y  L+    ++   + A  +  ++  +
Sbjct: 157 TLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDK 216

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P+IVT N ++  +C  G++ +A      L   G +PN V+++ ++   C   + E A
Sbjct: 217 GCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDA 276

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +L   M      P+++ +++LI  L + G ++   E+L      G   + + ++ ++ A
Sbjct: 277 EKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHA 336

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +     + RA+   + M++ G  P+++SY+ L+  LC+ G +  A  L  Q+  +   P 
Sbjct: 337 FCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 396

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           L++Y+++IDG  K+GK  +   L + M+ +GL+PD +  S + +GL     + +A++ F 
Sbjct: 397 LISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFC 456

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +   M + PN  ++N ++ G C+ +     + LF  M      P+  T+T+LI G+A +G
Sbjct: 457 KVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEG 516

Query: 503 SLSSAILLFFQMLKRGL 519
            +  A  +  ++  RG+
Sbjct: 517 LVKEAREMMAELCSRGV 533



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 168/337 (49%), Gaps = 18/337 (5%)

Query: 106 DSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLV 158
           D + D GC      Y+ ++    + G++D+++E    +   G    P+ V    ++  L 
Sbjct: 211 DEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGC--EPNTVSYNIVLKGLC 268

Query: 159 DSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
            +       KL   M  KG       +  L++ L R+G++E A  +  Q+ + G  PN +
Sbjct: 269 TAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSL 328

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           + N IL   C   ++  A +  ++++  G  P++V+++TL+ A C+  +++ A +L + +
Sbjct: 329 SYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 388

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            +    P LI Y+ +IDGL KAG+ +E  ELL   + +GL+ D++ +S++       G +
Sbjct: 389 KDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRI 448

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A++ + ++ + G  PN + Y+ ++ GLC++     A  LF  ++     P+  TY+ L
Sbjct: 449 EEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTIL 508

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           I+G    G +++   +   +  RG     VV   L+N
Sbjct: 509 IEGLAYEGLVKEAREMMAELCSRG-----VVSKTLVN 540



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 6/207 (2%)

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAV-VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNT 458
           + G L +   L ++M   GL+P A   C+ LI  L         + V  +  P++  +N 
Sbjct: 68  RRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVLASCEPDVMSYNA 125

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C   +  +  +L   M M   +PD  T+  LIRG+  +G   +A+ +   ML+RG
Sbjct: 126 MVAGYCVTGQLDNARRLVAAMPM---EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRG 182

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             PDV+TY+ ++    K       + +   M   G APDI  YNV++N + +E  +D A+
Sbjct: 183 CVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAM 242

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCS 605
           +    L   G EP+ ++YN ++ G C+
Sbjct: 243 EFLKSLPSYGCEPNTVSYNIVLKGLCT 269


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 213/425 (50%), Gaps = 7/425 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y +L+  L R G I+ A     ++ +   VP++ T N ++  LC   +I  A   F+ + 
Sbjct: 38  YCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM- 96

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
              P+P+VVT++TL+   CK  ++ +A  L+  M    + P  + Y+ LID   K  + +
Sbjct: 97  ---PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFE 153

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               LL     R     V  + S+++       V +A Q ++ M   G  P+ ++Y+ LI
Sbjct: 154 TAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI 213

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC + RL EA  L   ++    +P  +T+++LI+G C + ++++ F L+  M K+G  
Sbjct: 214 HGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCA 273

Query: 421 PDAVVCSLLINGL-MGDALRFFFQSVR-MTLIPNLFIFNTLMDGCCRLKRATD-TVKLFM 477
           PD V  ++L++ L +   LR     VR     P   I  T +      +R  D   +L  
Sbjct: 274 PDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQ 333

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    + P+V+T+T   +G+        A   F +ML++G+ PD++ Y+ ++ G  K  
Sbjct: 334 KMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKAD 393

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            + +   M + M+++G+ P+I  YN L+    ++  ++A  +L   +  RG +PD+ T++
Sbjct: 394 RLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWS 453

Query: 598 TIICG 602
           T++ G
Sbjct: 454 TLVAG 458



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 194/429 (45%), Gaps = 42/429 (9%)

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           VTCN +L  L    +      +F  +     KPN +++  L+ A C+  K++KA      
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M    LVPD+  Y+++ID L KA R+    E   T  +     DVV +++++      G 
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEP----DVVTYNTLLGGLCKNGR 116

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           V +A   +  M   G  P+ ++Y+ LI   C+  +   A GL   +  R+  P++ +Y S
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           +I+G CK+ K+   + L++ M   G KPD V  + LI+GL     + +A       V   
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI------------- 495
             P+   F  L++G C   R  +   LF  M      PD++THTVL+             
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPAL 296

Query: 496 --------------------RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
                               R +  +     A  L  +M +RG+ P+V+TY+A   GL  
Sbjct: 297 SVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGD 356

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            K        F+ M   G+ PD+  YNVL++   K   LD A K+   +   GL P+I+T
Sbjct: 357 WKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVT 416

Query: 596 YNTIICGYC 604
           YNT++  +C
Sbjct: 417 YNTLVGHHC 425



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 204/474 (43%), Gaps = 75/474 (15%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F R+F          Y +L++   R GKID++    A M+     L PD+     + ++D
Sbjct: 23  FRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREK--LVPDVFT--YNVVID 78

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
           +        LC+A R                   I  A      + +    P++VT N +
Sbjct: 79  T--------LCKARR-------------------ISRAIEFFETMPE----PDVVTYNTL 107

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           L  LC NG++  A SLF  +   G  P+ VT++TLI+ FCK  + E A+ L  LM     
Sbjct: 108 LGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKC 167

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            P +  Y  +I+GL K  ++ +  +L       G K D V +++++        +  A  
Sbjct: 168 SPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKD 227

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
               M+  GF P+ I+++ LI+GLC   R+ EA  LF  +  +   P L+T++ L+   C
Sbjct: 228 LLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLC 287

Query: 400 KSGKLRDGFSLYDN---------------------------------MIKRGLKPDAVVC 426
              KLR   S+  N                                 M +RG+ P+ V  
Sbjct: 288 ILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTY 347

Query: 427 SLLINGLMGD------ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           +    GL GD      A R F + +   + P++  +N L+DG C+  R     K+   M 
Sbjct: 348 TAFFKGL-GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMD 406

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
              + P+++T+  L+     +G + +   L   M+ RG  PDV T+S ++ GLF
Sbjct: 407 QSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLF 460



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 9/276 (3%)

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           V  + R+ +    PN +SY  L+K LC+ G++ +AC    ++   +L P + TY+ +ID 
Sbjct: 20  VVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDT 79

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPN 452
            CK+ ++      ++ M +    PD V  + L+     NG +  A   F       + P+
Sbjct: 80  LCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPS 135

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              + TL+D  C++ +      L  LM      P V ++  +I G+     +  A  LF 
Sbjct: 136 DVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFE 195

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M   G  PD +TY+ +IHGL   + +     +  +M  NG  PD   +  L+  L    
Sbjct: 196 EMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTD 255

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            +  A  LF  +  +G  PD++T+  ++   C L  
Sbjct: 256 RIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRK 291



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 4/150 (2%)

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N L+D   R +R+   V +F  +   + KP+ +++  L++ +   G +  A     +M +
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
             L PDV TY+ +I  L K + IS  +  F+ M      PD+  YN LL  L K   +  
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQ 119

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           A  LFG +   G+ P  +TY T+I  +C +
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKM 149



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/347 (21%), Positives = 151/347 (43%), Gaps = 49/347 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ + ++ + + +  +   M+      SP +     +++ L  +  V Q Y+L   
Sbjct: 139 YTTLIDVFCKMCQFETAYGLLQLMASRKC--SPTVYSYCSIINGLCKNRKVDQAYQLFEE 196

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G       Y  L++GL  K  +  A  +   +++ GF P+ +T   +++ LC   +
Sbjct: 197 MKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDR 256

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL------------------------ 264
           I  A  LF  +   G  P++VT + L++  C   KL                        
Sbjct: 257 IKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIF 316

Query: 265 ---------EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL---LLTALDR 312
                    ++A +L   M    + P+++ Y+    GL   G  KEG          L++
Sbjct: 317 RELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQ 373

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G++ D+V ++ ++D +     +  A +    M   G  PN+++Y+ L+   C++G+ VEA
Sbjct: 374 GIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGK-VEA 432

Query: 373 CGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            G     ++ R  +P + T+S+L+ G    G+    +S  +  + +G
Sbjct: 433 IGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 231/490 (47%), Gaps = 39/490 (7%)

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF--- 178
           +  IGK+ E+V++   M + G+ L+  ++ R++    +   V     +   M  +G    
Sbjct: 184 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 243

Query: 179 -CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
            C Y++++ G  R G +  A     ++++RGFV +  T   I+   C    +  A   F 
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 303

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +  +G  PN++ +S++I+  CK   +++AF+L   M++    P++  ++ LI GL K G
Sbjct: 304 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 363

Query: 298 RLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
             +    L L  +     K +V  +++++  Y     + RA   ++RM   G +PN  +Y
Sbjct: 364 WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 423

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI G C+ G   +A  L   +      P+  TY+S++DG CK G+  + F L +   +
Sbjct: 424 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQ 483

Query: 417 RGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
             ++ D V  ++LI+                             + C   KRA     L 
Sbjct: 484 NQIEADGVTYTILIS-----------------------------EQC---KRADMNQALV 511

Query: 477 MLMGMYNI--KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
            L  M+ +  +PD+  +T LI     Q  +  +  LF +++K GL P   TY+++I G  
Sbjct: 512 FLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYC 571

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           + K +S+ +  F+ M  +G APD   Y  L++ L KE  LD A +L+  + D+GL P  +
Sbjct: 572 REKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEV 631

Query: 595 TYNTIICGYC 604
           T  T+   YC
Sbjct: 632 TRVTLTYEYC 641



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 248/534 (46%), Gaps = 61/534 (11%)

Query: 73  VLLQSDMR--DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDE 130
           +L+ ++MR  + A +VFD+M  +         ++ DS     C Y ++I  Y R G + E
Sbjct: 216 ILVAAEMRLVEYAGNVFDEMSAR--------GVYPDS-----CTYKYIIVGYCRNGNVLE 262

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YYKLCRAMRGKGFCVYEFLMN 186
           +      M + G  +    +  +++   + + V +    ++K+ +         Y  +++
Sbjct: 263 ADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMIS 322

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-K 245
           GL ++G ++ AF +  ++++ G+ PN+ T   ++  LC  G    A  LF  L+     K
Sbjct: 323 GLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYK 382

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNV T++ +I+ +CKE KL +A  L+  M E  LVP+   Y+ LIDG  KAG   +  EL
Sbjct: 383 PNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYEL 442

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV----ISYSILIK 361
           +    + G   +   ++S++D   G+   GRA + + ++LN GF   +    ++Y+ILI 
Sbjct: 443 MELMSNEGFFPNTCTYNSIVD---GLCKRGRAEEAF-KLLNTGFQNQIEADGVTYTILIS 498

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
             C++  + +A     ++     +P +  Y++LI  FC+   ++D   L+D +IK GL P
Sbjct: 499 EQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAP 558

Query: 422 DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
                                             + +++ G CR K+ +  VK F  M  
Sbjct: 559 TKET------------------------------YTSMICGYCREKKVSLAVKFFQKMSD 588

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
           +   PD I++  LI G+  +  L  A  L+  M+ +GL+P  +T   + +   K ++ + 
Sbjct: 589 HGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFAS 648

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            +    ++ER      I   + L+  L  E  +  A   F +L D+ +  D +T
Sbjct: 649 AM---VILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVT 699



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 205/425 (48%), Gaps = 17/425 (4%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAM 173
           + +I  +     ++ +V  F  ++ MG  LSP+L+    ++S L    SV Q ++L   M
Sbjct: 283 TLIITAFCEKSLVNRAVWFFHKVTKMG--LSPNLINYSSMISGLCKRGSVKQAFELLEEM 340

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQ 228
              G+      +  L++GL +KG  E AF +  ++I+   + PN+ T   ++   C   +
Sbjct: 341 VKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 400

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  LF+ +   G  PN  T++TLI+  CK     KA++L  LM      P+   Y+ 
Sbjct: 401 LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNS 460

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++DGL K GR +E  +LL T     ++ D V ++ ++       D+ +A+   ++M   G
Sbjct: 461 IVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVG 520

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F P++  Y+ LI   C+Q  + ++  LF +V+   L P+  TY+S+I G+C+  K+    
Sbjct: 521 FQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAV 580

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
             +  M   G  PD++    LI+GL     + +A + +   +   L P      TL    
Sbjct: 581 KFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEY 640

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+ +   D     +++   N K  + T   LIR +  +  ++ A L F ++L + +  D 
Sbjct: 641 CKTE---DFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDR 697

Query: 524 ITYSA 528
           +T +A
Sbjct: 698 VTLAA 702



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 142/302 (47%), Gaps = 6/302 (1%)

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           RG+  D   +  ++  Y   G+V  A +    M+  GF+ +  + +++I   C++  +  
Sbjct: 238 RGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNR 297

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A   F +V    L P+L+ YSS+I G CK G ++  F L + M+K G KP+    + LI+
Sbjct: 298 AVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIH 357

Query: 432 GLMGD-----ALRFFFQSVRM-TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           GL        A R F + +R     PN+  +  ++ G C+ ++ +    LF  M    + 
Sbjct: 358 GLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLV 417

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P+  T+T LI G    G+ S A  L   M   G  P+  TY++I+ GL K         +
Sbjct: 418 PNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKL 477

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
                +N +  D   Y +L++   K  +++ AL    ++   G +PDI  Y T+I  +C 
Sbjct: 478 LNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCR 537

Query: 606 LN 607
            N
Sbjct: 538 QN 539



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 23/194 (11%)

Query: 437 ALRFFFQSV---RMTLIPNLFIFNTL-MDGCCRLKRATDTVK----LFMLMGMYNIKPD- 487
           AL FF+ +V   +      L+I  T+ + G C L+RA + V+    +F  +G      D 
Sbjct: 137 ALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDM 196

Query: 488 ---------VITHTVLIRGI---ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
                    V+T  V+ R I   A    +  A  +F +M  RG+ PD  TY  II G  +
Sbjct: 197 ILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCR 256

Query: 536 GKNI-SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
             N+      + ++MER G   D A   +++    ++  ++ A+  F ++T  GL P++I
Sbjct: 257 NGNVLEADRWICEMMER-GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLI 315

Query: 595 TYNTIICGYCSLNS 608
            Y+++I G C   S
Sbjct: 316 NYSSMISGLCKRGS 329


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 217/436 (49%), Gaps = 6/436 (1%)

Query: 175 GKGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
            + F  Y E L  G L     E+AF +  +++    +P+IV   ++L       +     
Sbjct: 32  ARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI 91

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
                + L G   ++ +F+ LI+ FC+ ++L  A  +   MM++   P ++ +  L+ G 
Sbjct: 92  YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF 151

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
               R+ +   L++  +  G + +VVV+++++D     G++  A++  + M   G   +V
Sbjct: 152 CLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ L+ GLC  GR  +A  +   ++ R + P ++T+++LID F K G L +   LY  
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           MI+  + P+ V  + +INGL     + DA + F         PN+  +NTL+ G C+ + 
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             + +KLF  M       D+ T+  LI G    G L  A+ +F  M+ R +TPD+IT+  
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++HGL     I   L  F  M  +     I  YN++++ L K   ++ A +LF +L   G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451

Query: 589 LEPDIITYNTIICGYC 604
           ++PD  TY  +I G C
Sbjct: 452 VKPDARTYTIMILGLC 467



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 195/387 (50%), Gaps = 30/387 (7%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++++ G+ P+IVT   +L   C+  +IG+A SL  +++  G +PNVV ++TLI+  CK  
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +L  A +L N M +  L  D++ Y+ L+ GL  +GR  +   +L   + R +  DVV F+
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++D +V  G++  A + Y  M+     PN ++Y+ +I GLC  GRL +A   F  +  +
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
              P+++TY++LI GFCK   + +G  L+  M   G   D                    
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD-------------------- 350

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                     +F +NTL+ G C++ +    + +F  M    + PD+ITH +L+ G+   G
Sbjct: 351 ----------IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            + SA++ F  M +      ++ Y+ +IHGL K   +     +F  +   GV PD   Y 
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGL 589
           +++  L K      A +L  ++ + G+
Sbjct: 461 IMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 218/415 (52%), Gaps = 5/415 (1%)

Query: 195  ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
            ++AF +  +++Q   +P+IV   ++L  +    +      L+  +  +G   ++ +F+ L
Sbjct: 586  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645

Query: 255  INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
            I+ FC+ ++L  A  L   MM++   P ++    L++G  +  R +E   L+ +    G 
Sbjct: 646  IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705

Query: 315  KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
              +VV++++V++      D+  A++ +  M   G   + ++Y+ LI GL   GR  +A  
Sbjct: 706  VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765

Query: 375  LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
            L   ++ R+++P+++ +++LID F K G L +  +LY  MI+R + P+    + LING  
Sbjct: 766  LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 825

Query: 434  ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
                +GDA   F   V     P++  +NTL+ G C+ KR  D +KLF  M    +  D  
Sbjct: 826  IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 885

Query: 490  THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
            T+  LI G    G L+ A  +F +M+  G++PD++TY+ ++  L     I   L M + +
Sbjct: 886  TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945

Query: 550  ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +++ +  DI  YN+++  L +   L  A  LF  LT +G++PD I Y T+I G C
Sbjct: 946  QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 1000



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 206/410 (50%), Gaps = 31/410 (7%)

Query: 203  QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            ++++ GF P+IVT   +L   C   +   A SL D +   G  PNVV ++T+IN  CK  
Sbjct: 664  KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 723

Query: 263  KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
             L  A +++  M +  +  D + Y+ LI GL  +GR  +   LL   + R +  +V+ F+
Sbjct: 724  DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 783

Query: 323  SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            +++D +V  G++  A   Y  M+    +PNV +Y+ LI G C  G L +A  +F  ++ +
Sbjct: 784  ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 843

Query: 383  RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
               P ++TY++LI GFCKS ++ DG  L+              C +   GL+GDA     
Sbjct: 844  GCFPDVVTYNTLITGFCKSKRVEDGMKLF--------------CEMTYQGLVGDA----- 884

Query: 443  QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                       F +NTL+ G C+  +     K+F  M    + PD++T+ +L+  + + G
Sbjct: 885  -----------FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 933

Query: 503  SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
             +  A+++   + K  +  D+ITY+ II GL +   +     +F+ + R GV PD   Y 
Sbjct: 934  KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 993

Query: 563  VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN-TIICGYCSLNSCLI 611
             +++ L ++     A KL  ++ + G  P    Y+ T+   Y SL++ LI
Sbjct: 994  TMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELI 1043



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 192/382 (50%), Gaps = 5/382 (1%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +  +A SLF  +L   P P++V F+ ++    K  K +    LY+ M  + +  DL  ++
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ILI    +  RL     LL   +  G +  +V   S+++ +        AV   D M   
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GF+PNV+ Y+ +I GLC+   L  A  +F  +  + +    +TY++LI G   SG+  D 
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L  +M+KR + P+ +  + LI+     G + +A   + + +R +++PN+F +N+L++G
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C      D   +F LM      PDV+T+  LI G      +   + LF +M  +GL  D
Sbjct: 824 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
             TY+ +IHG  +   ++V   +F  M   GV+PDI  YN+LL+ L     ++ AL +  
Sbjct: 884 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
            L    ++ DIITYN II G C
Sbjct: 944 DLQKSEMDVDIITYNIIIQGLC 965



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 187/399 (46%), Gaps = 47/399 (11%)

Query: 220 LKRLCINGQIGNASSLFDVLL---LVGPKPNVVTFS----TLINAFCKEAKLEKAFQLYN 272
           ++RL + G   + +  F  ++   L+G       FS     L   F    + E AF L+ 
Sbjct: 1   MRRLIVTGIATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFF 60

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M+    +P ++ ++ L+       R +                 V+ FS  M+ Y    
Sbjct: 61  EMVHSQPLPSIVDFTRLLTATANLRRYET----------------VIYFSQKMELY---- 100

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
                          G   ++ S++ILI   C+  RL  A  + G+++    EPS++T+ 
Sbjct: 101 ---------------GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFG 145

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRM 447
           SL+ GFC   ++ D FSL   M+K G +P+ VV + LI+GL  +     AL    +  + 
Sbjct: 146 SLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            L  ++  +NTL+ G C   R +D  ++   M   +I PDV+T T LI     QG+L  A
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             L+ +M++  + P+ +TY++II+GL     +      F LM   G  P++  YN L++ 
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             K   +D  +KLF +++  G   DI TYNT+I GYC +
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 173/348 (49%), Gaps = 5/348 (1%)

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           K + AF L+  M++   +P ++ ++ ++  + K  +      L     + G+  D+  F+
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            ++  +     +  A+    +M+  GF P++++   L+ G CQ  R  EA  L   +   
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
              P+++ Y+++I+G CK+  L +   ++  M K+G++ DAV  + LI+GL       DA
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            R     V+  + PN+  F  L+D   +     +   L+  M   ++ P+V T+  LI G
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
               G L  A  +F  M+ +G  PDV+TY+ +I G  K K +  G+ +F  M   G+  D
Sbjct: 824 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
              YN L++   +   L+ A K+F ++ D G+ PDI+TYN ++   C+
Sbjct: 884 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 931



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 169/325 (52%), Gaps = 9/325 (2%)

Query: 106  DSLGDFGCDYSFLIENYVRIG-----KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
            DS+  FG   + +I N V  G      ++ ++E+F  M   GI         L+S L +S
Sbjct: 698  DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 757

Query: 161  NSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
                   +L R M  +        +  L++  +++G +  A ++++++I+R  VPN+ T 
Sbjct: 758  GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 817

Query: 217  NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
            N ++   CI+G +G+A  +FD+++  G  P+VVT++TLI  FCK  ++E   +L+  M  
Sbjct: 818  NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 877

Query: 277  MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
              LV D   Y+ LI G  +AG+L    ++    +D G+  D+V ++ ++D     G + +
Sbjct: 878  QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 937

Query: 337  AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
            A+   + +       ++I+Y+I+I+GLC+  +L EA  LF  +  + ++P  + Y ++I 
Sbjct: 938  ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 997

Query: 397  GFCKSGKLRDGFSLYDNMIKRGLKP 421
            G C+ G  R+   L   M + G  P
Sbjct: 998  GLCRKGLQREADKLCRRMKEDGFMP 1022



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 116/519 (22%), Positives = 245/519 (47%), Gaps = 35/519 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   + G+++ ++E+   M   G+         L++ L  S       ++ R M 
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        +  L++  +++G ++ A  +++++IQ    PN VT N I+  LC++G++ 
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A   FD++   G  PNVVT++TLI+ FCK   +++  +L+  M       D+  Y+ LI
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G+L+   ++    + R +  D++    ++      G++  A+  +D M      
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
             +++Y+I+I GLC+  ++ +A  LF ++ +  ++P   TY+ +I G CK+G  R+    
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA--- 475

Query: 411 YDNMIKRGLKPDAVVCSLLI-----------NGLMGDALRFFFQSVR------MTLIPNL 453
            D +I+R +K + ++C +             N  +  +LR  ++  +        LIP  
Sbjct: 476 -DELIRR-MKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIP-- 531

Query: 454 FIFNTLMDGCCR-----LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
             F++ + G  R     L+R  +      L   ++       +   +R          A 
Sbjct: 532 IAFSSSVKGFVRRHYLLLERGNNPET--SLSRSFSGASHHHHYRERLRNELHCIKFDDAF 589

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            LF +ML+    P ++ ++ ++  + K     + ++++  ME  G++ D+  + +L++  
Sbjct: 590 SLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCF 649

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            +   L  AL L G++   G  P I+T  +++ G+C  N
Sbjct: 650 CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN 688



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 174/340 (51%), Gaps = 8/340 (2%)

Query: 104  FRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
            FR S+   G     L+  + +  +  E+V +   M   G   +  +   +++ L  +  +
Sbjct: 670  FRPSIVTLGS----LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 725

Query: 164  GQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
                ++   M  KG       Y  L++GL   G   +A  + R +++R   PN++    +
Sbjct: 726  NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 785

Query: 220  LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
            +      G +  A +L+  ++     PNV T+++LIN FC    L  A  +++LM+    
Sbjct: 786  IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 845

Query: 280  VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
             PD++ Y+ LI G  K+ R+++G +L      +GL  D   +++++  Y   G +  A +
Sbjct: 846  FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 905

Query: 340  TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
             ++RM++ G  P++++Y+IL+  LC  G++ +A  +   +    ++  ++TY+ +I G C
Sbjct: 906  VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 965

Query: 400  KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR 439
            ++ KL++ + L+ ++ ++G+KPDA+    +I+GL    L+
Sbjct: 966  RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 1005



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/104 (22%), Positives = 53/104 (50%)

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A  LFF+M+     P ++ ++ ++      +     ++  + ME  G++ D+  + +
Sbjct: 52  FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++   +   L  AL + G++   G EP I+T+ +++ G+C +N
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 212/429 (49%), Gaps = 36/429 (8%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRG--FVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           Y  L+ GL +      A  + R +I RG    P++VT + +L   C  G++  +  L   
Sbjct: 48  YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKE 107

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           ++  G +P+ + ++ ++ + CK A+L +A +L   M+     P LI ++ LI G  +   
Sbjct: 108 VISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKN 167

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L+  + LL      G+K DVV ++++MD     G +  A Q  +RM   G  P+V++YS 
Sbjct: 168 LEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS 227

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            + GLC+ G++++A  +  Q+     +P+++TY++++DG CKSGK+     + + M    
Sbjct: 228 FVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS-- 285

Query: 419 LKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
               +  C L                       N+  ++T++DG C+L R  +   +   
Sbjct: 286 ----SDGCGL-----------------------NVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M     +PDV+T++ L+ G+   G +  A+    +M   G  P+ +TY +++HGL     
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378

Query: 539 ISVGLHMFKLMERNG-----VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           ++    M + M   G       P ++ YN L+  L K   +D ALK F ++  +G +PD 
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438

Query: 594 ITYNTIICG 602
           ++Y+TI+ G
Sbjct: 439 VSYSTIVEG 447



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 212/462 (45%), Gaps = 65/462 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+E   ++ +  E+ E+   M   G   +PD+V                        
Sbjct: 48  YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMV------------------------ 83

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++G  + G +E +  + ++VI RG  P+ +   K++  LC + ++G A  
Sbjct: 84  -----TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALE 138

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + ++  G  P ++TF+TLI+  C+E  LE A  L   M    +  D++ Y+ L+DGL 
Sbjct: 139 LLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLC 198

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           KAGRL+E  +LL      G   DVV +SS +      G V  A Q  ++M +    PNV+
Sbjct: 199 KAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVV 258

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           +Y+ ++ GLC+ G++  A  +  Q+        +++ YS+++DG CK G+ ++  S+ + 
Sbjct: 259 TYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           M + G +PD V  S L+NGL                              C+  +  + V
Sbjct: 319 MARAGCRPDVVTYSSLVNGL------------------------------CKAGKIEEAV 348

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-----LKRGLTPDVITYSA 528
           +    M M   KP+ +T+  L+ G+ S G L+ A  +  +M           P V TY+A
Sbjct: 349 EAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNA 408

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           +I GL K   I   L  F+ M   G  PD   Y+ ++  L +
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 9/306 (2%)

Query: 310 LDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
           +DR G   + V F+++++ +   G  G   +  + M      PNV+SY+ L++GLC+  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 369 LVEACGLFGQVLIR--RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA--- 423
             EA  L   ++ R  R  P ++TYS+L+ G+CK+GK+ +   L   +I RGL+PDA   
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 424 --VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
             VV SL  +  +G+AL    + +R    P L  FNTL+ GCCR K       L   M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             +K DV+T+  L+ G+   G L  A  L  +M   G  PDV+ YS+ ++GL K   +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL-TDRGLEPDIITYNTII 600
              + + M  +   P++  YN +L+ L K   +D AL++  Q+ +  G   +++ Y+T++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 601 CGYCSL 606
            G C L
Sbjct: 301 DGLCKL 306


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 211/422 (50%), Gaps = 11/422 (2%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L+ +  +  A  +      RG  P++  C K+++ LC  G+  +A+ +       G   +
Sbjct: 49  LIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVD 108

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V  ++TL+  +C+  +L+ A +   L+  M + PD   Y+ +I GL   GR+ +   LL 
Sbjct: 109 VFAYNTLVAGYCRYGRLDAARR---LIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLD 165

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             L RG +  VV ++ +++A       G A+   D M   G  PN+++Y+++I G+C++G
Sbjct: 166 DMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 225

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           R+ +A  +  ++     +P +++Y++++ G C + +  D   L+  M+ +   P+ V   
Sbjct: 226 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 285

Query: 428 LLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +L+      G++  A++   Q  +    PN  + N +++  C+  R  D       MGMY
Sbjct: 286 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 345

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
              PD I++T ++RG+   G    A  L  +M+++   P+ +T++  I  L +   I   
Sbjct: 346 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 405

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           + + +LM   G +  I  YN L++    +  +D+AL+LF  L     EP+ ITY T++ G
Sbjct: 406 IKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTG 462

Query: 603 YC 604
            C
Sbjct: 463 LC 464



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/553 (22%), Positives = 252/553 (45%), Gaps = 51/553 (9%)

Query: 62  VSSPNIAQLIHVLLQSDMRDVASHVF--DKMV---IQFGKTYNFFRLFRDSLGDFGC--- 113
           ++  ++A+   ++  S  R  A  V+   K++    + G+T +  R+ R +         
Sbjct: 50  IARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDV 109

Query: 114 -DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
             Y+ L+  Y R G++D +  + A M      + PD                        
Sbjct: 110 FAYNTLVAGYCRYGRLDAARRLIASMP-----VPPDAY---------------------- 142

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
                   Y  ++ GL  +G + +A  +   ++QRG  P++VT   +L+ +C +   G A
Sbjct: 143 -------TYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEA 195

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
            ++ D +   G  PN+VT++ +IN  C+E +++ A ++ N +      PD++ Y+ ++ G
Sbjct: 196 MNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKG 255

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L  A R  +   L    +D+    + V F  ++  +   G V RA+Q   +M   G  PN
Sbjct: 256 LCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPN 315

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
               +I+I  +C+QGR+ +A      + +    P  ++Y++++ G C++G+      L  
Sbjct: 316 TTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLP 375

Query: 413 NMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M+++   P+ V     +C L   GL+  A++             +  +N L+ G C   
Sbjct: 376 EMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG 435

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R    ++LF        +P+ IT+T L+ G+     L +A  L   M+++    + +T++
Sbjct: 436 RVDSALELF---NNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFN 492

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++    +   +   + +   M  +G  P++  +N LL+ + K+CN + AL+L   L  +
Sbjct: 493 VLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSK 552

Query: 588 GLEPDIITYNTII 600
           G+  D ITY++++
Sbjct: 553 GVSLDTITYSSVV 565



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNT 458
           L +   L +    RG  PD  +C+ LI      G   DA R    +       ++F +NT
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+ G CR  R     +L   M    + PD  T+T +IRG+  +G +  A+ L   ML+RG
Sbjct: 115 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             P V+TY+ ++  + K       +++   M   G  P+I  YNV++N + +E  +D A 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCS 605
           ++  +L+  G +PDI++Y T++ G C+
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCA 258



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 149/325 (45%), Gaps = 12/325 (3%)

Query: 104 FRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
           F +++G +GC+     Y+ ++    R G+ + + E+   M       +       +  L 
Sbjct: 338 FLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILC 397

Query: 159 DSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
               + Q  KL   M   G  V    Y  L++G   +G +++A  +   +      PN +
Sbjct: 398 QKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTI 454

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T   +L  LC   ++  A+ L   ++      N VTF+ L++ FC++  +E+A +L N M
Sbjct: 455 TYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQM 514

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           ME    P+LI ++ L+DG+ K    +E  ELL   + +G+ LD + +SSV+D        
Sbjct: 515 MEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRT 574

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A+Q    + + G  P V  Y+ ++  LC++    +A   F  ++     P+  TY  L
Sbjct: 575 EEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIIL 634

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+G    G L++   +   +  +G+
Sbjct: 635 IEGLAHEGLLKEARYVLSELYAKGV 659



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           +R + ++  L+ A  L      RG  PDV   + +I  L +    S    + +  E +G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             D+  YN L+    +   LDAA +L   +    + PD  TY  II G C
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLC 152


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 252/517 (48%), Gaps = 39/517 (7%)

Query: 93  QFGKTYNFF-RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           + GK  +FF R+  + L      +S +IE + +  +++++VEI+  M  +GI  S  LV 
Sbjct: 360 ELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVH 419

Query: 152 RLMSCLVDSNSVGQYYKL----CRAMRGKGF-CVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
           +++   + + S     ++           GF C   FL+  L ++G ++ A    R +  
Sbjct: 420 KMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLL--LCKQGKVDAATSFLRMMEN 477

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G  PN+V  N ++   C    +  A S+F  +L  G +PN  T+S LI+ F K    + 
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQN 537

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVM 325
           A+++ N M+  +   + +IY+ +I+GL K G+  +  E+L   + ++   +    ++S++
Sbjct: 538 AWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSII 597

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           D +   GD   AV+ Y  M   G  PNV++++ LI G C+  R+  A  +  ++  + L+
Sbjct: 598 DGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLK 657

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
             +  Y +LIDGFCK   ++  ++L+  +++ G                           
Sbjct: 658 LDVPAYGALIDGFCKKNDMKTAYTLFSELLELG--------------------------- 690

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              L+PN+ ++N L+ G   L +    + L+  M    I  D+ T+T +I G+   G+L 
Sbjct: 691 ---LMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLI 747

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  L+ ++L  G+ PD I Y  +++GL K         M + M++    P++ IY+ ++
Sbjct: 748 LASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVI 807

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
               +E NL+ A ++  ++ ++GL  D   +N ++ G
Sbjct: 808 AGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG 844



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 149/659 (22%), Positives = 292/659 (44%), Gaps = 72/659 (10%)

Query: 21  SESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHN----CVSSPNIAQLIHVLLQ 76
           SE+  H+ D     A+ I   L + N+P  A+Q+  W       C        LIH+L  
Sbjct: 71  SETDNHVDD-----AHVIEVLLGRRNDPVSALQYCNWVKPLRSLCEGGDVFWVLIHILFS 125

Query: 77  S-DMRDVASHVF------DKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVR 124
           S    D AS++       +  +I      N      DS   F  +     +++L+  Y+R
Sbjct: 126 SPHTHDRASNLLVMFVSSNPTLIPSAMVNNLV----DSSKRFDFELSSRAFNYLLNAYIR 181

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----V 180
             ++D +V+ F  M D  +      V  ++S LV SN + +  ++   M   G       
Sbjct: 182 NRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVT 241

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
            + LM   LR+   E A  + R+V+ RG  P+ +  +  ++  C    +  A  L   + 
Sbjct: 242 TQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMR 301

Query: 241 LVGPKP-NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             G  P +  T++++I A  KE  +E+A ++ + M+   +   +I  + LI G      L
Sbjct: 302 EKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNEL 361

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +  +      + GL  D V+FS +++ +    ++ +AV+ Y RM + G  P+ +    +
Sbjct: 362 GKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKM 421

Query: 360 IKG----------------------------------LCQQGRLVEACGLFGQVLIRRLE 385
           I+G                                  LC+QG++  A      +  + +E
Sbjct: 422 IQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIE 481

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRF 440
           P+++ Y++++   C+   +    S++  M+++GL+P+    S+LI+G   +     A   
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEV 541

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM-LMGMYNIKPDVITHTVLIRGIA 499
             Q +      N  I+NT+++G C++ + +   ++   L+          ++  +I G  
Sbjct: 542 INQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFF 601

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G   SA+  + +M + G++P+V+T++++I+G  K   + + L M   M+   +  D+ 
Sbjct: 602 KEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVP 661

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN--SCLIDGYFK 616
            Y  L++   K+ ++  A  LF +L + GL P++  YN +I G+ +L      ID Y K
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKK 720



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 143/624 (22%), Positives = 266/624 (42%), Gaps = 103/624 (16%)

Query: 65  PNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS--FLIENY 122
           P +  ++  L++S++ D A  +++KMV+               +G  G + +   L+   
Sbjct: 205 PYVNNVLSSLVRSNLIDEAKEIYNKMVL---------------IGVAGDNVTTQLLMRAS 249

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC- 179
           +R  K +E+++IF  +   G    PD  L    +        +     L R MR KG   
Sbjct: 250 LRERKPEEAMKIFRRVMSRGA--EPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVP 307

Query: 180 ----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                Y  ++   +++G +E A  +  +++  G   +++    ++   C   ++G A   
Sbjct: 308 ASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDF 367

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F+ +   G  P+ V FS +I  FCK  ++EKA ++Y  M  + + P  ++   +I G  K
Sbjct: 368 FNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLK 427

Query: 296 A----------------------------------GRLKEGNELLLTALDRGLKLDVVVF 321
           A                                  G++      L    ++G++ +VV +
Sbjct: 428 AESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFY 487

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI--------------------- 360
           +++M A+  + ++  A   +  ML  G  PN  +YSILI                     
Sbjct: 488 NNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIA 547

Query: 361 --------------KGLCQQGRLVEACGLFGQVLIRRLEPSL--LTYSSLIDGFCKSGKL 404
                          GLC+ G+  +A  +  Q LI+    S+   +Y+S+IDGF K G  
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEML-QNLIKEKRYSMGCTSYNSIIDGFFKEGDT 606

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
                 Y  M + G+ P+ V  + LING      M  AL    +     L  ++  +  L
Sbjct: 607 DSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGAL 666

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG C+         LF  +    + P+V  +  LI G  + G + +AI L+ +M+  G+
Sbjct: 667 IDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGI 726

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
           + D+ TY+ +I GL K  N+ +   ++  +   G+ PD  +Y VL+N L K+     A K
Sbjct: 727 SCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASK 786

Query: 580 LFGQLTDRGLEPDIITYNTIICGY 603
           +  ++  +   P+++ Y+T+I G+
Sbjct: 787 MLEEMKKKDATPNVLIYSTVIAGH 810



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 195/410 (47%), Gaps = 31/410 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA-----QLIHVLLQSDMRDVASHVFDKM 90
           N I   L K      A  F +   N    PN+       L H  +++   D+A  +F +M
Sbjct: 453 NKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKN--MDLARSIFSEM 510

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           + +  +  NF              YS LI+ + +      + E+   M       +  + 
Sbjct: 511 LEKGLQPNNF-------------TYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIY 557

Query: 151 QRLMSCLVDSNSVGQYYK-------LCRAMRGKGFCV-YEFLMNGLLRKGVIENAFHMHR 202
             +++ L     VGQ  K       L +  R    C  Y  +++G  ++G  ++A   +R
Sbjct: 558 NTIINGLC---KVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYR 614

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++ + G  PN+VT   ++   C + ++  A  +   +     K +V  +  LI+ FCK+ 
Sbjct: 615 EMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKN 674

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            ++ A+ L++ ++E+ L+P++ +Y+ LI G    G++    +L    ++ G+  D+  ++
Sbjct: 675 DMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYT 734

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++D  +  G++  A   Y  +L  G +P+ I Y +L+ GL ++G+ V A  +  ++  +
Sbjct: 735 TMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKK 794

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
              P++L YS++I G  + G L + F ++D M+++GL  D  + +LL++G
Sbjct: 795 DATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG 844



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 178/378 (47%), Gaps = 24/378 (6%)

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            F+ L+NA+ +  +++ A   +NLM++ ++VP +   + ++  L ++  + E  E+    
Sbjct: 171 AFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           +  G+  D V    +M A +       A++ + R+++ G  P+ + +S+ ++  C+   L
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDL 290

Query: 370 VEACGLFGQVLIRRLEP-SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           V A  L  ++  +   P S  TY+S+I    K G + +   + D M+  G+    +  + 
Sbjct: 291 VMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATS 350

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LI G      +G AL FF +     L P+  +F+ +++  C+       V+++  M    
Sbjct: 351 LITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVG 410

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           I P  +    +I+G     S  +A+ +F    +  +    +  + I   L K   +    
Sbjct: 411 IAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMC-NKIFLLLCKQGKVDAAT 469

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKEC---NLDAALKLFGQLTDRGLEPDIITYNTII 600
              ++ME  G+ P++  YN   NM++  C   N+D A  +F ++ ++GL+P+  TY    
Sbjct: 470 SFLRMMENKGIEPNVVFYN---NMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTY---- 522

Query: 601 CGYCSLNSCLIDGYFKSQ 618
                  S LIDG+FK+Q
Sbjct: 523 -------SILIDGFFKNQ 533


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 221/427 (51%), Gaps = 16/427 (3%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC-----VY 181
           + D    + A     GI  +      L+  L   N V     L + +  +  C     +Y
Sbjct: 122 RTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMY 181

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +MNGL +KG  + AF + R + Q    PN  T   ++   C +G +  A+SL + +  
Sbjct: 182 GTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQ 241

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
               P++ T+STLI+A CK ++ E    L+  M+ +++ P++  ++ +IDGL K G++++
Sbjct: 242 KSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVED 301

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             E++   +++G+  DV+ ++ ++D Y   G V RA + +D M+N    P++ISY+ILI 
Sbjct: 302 AEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILIN 361

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G  +Q ++ EA  +  ++  + L+PS++T + L+ G  + G+ +   + +D M+  G  P
Sbjct: 362 GYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP 421

Query: 422 DAVV-CSLL----INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC---RLKRATDTV 473
           D    C+LL     NGL+ +A+  F +  R     N+ I+  ++DG C   +L +A  T 
Sbjct: 422 DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATF 481

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +   L+G++   PDVIT+T +I G   +G L  A  +  +M   G   D  TY+ I+ G 
Sbjct: 482 EKLPLIGLH---PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538

Query: 534 FKGKNIS 540
            +   +S
Sbjct: 539 LRSNKVS 545



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 221/453 (48%), Gaps = 41/453 (9%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD------------VLLL 241
           +++AF + RQ+++   +P++ + +K+LK +       +  SLF             +L +
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 242 V-----------------------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           V                       G   N VTF+TLI     E K++ A  L+  ++  +
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 279 LV-PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           +  P+ ++Y  +++GL K G  ++  +LL        K +   ++ V+DA+   G +  A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
               + M      P++ +YS LI  LC+  +      LF +++   + P++ T++S+IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMG--DALRFFFQS-VRMTLIPN 452
            CK GK+ D   +   MI++G+ PD +  +++I+G  L G  D  R  F S +  ++ P+
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPD 352

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  +N L++G  R K+  + +++   +    +KP ++T  VL+ G+   G   SA   F 
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +ML  G  PD+ T+  ++ G FK   +   +  F  +ER     +I IY  +++ L K  
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNG 472

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            LD A   F +L   GL PD+ITY  +I GYC 
Sbjct: 473 KLDKAHATFEKLPLIGLHPDVITYTAMISGYCQ 505



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 237/514 (46%), Gaps = 25/514 (4%)

Query: 109 GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK 168
           G+FG    F       +  +D++  +F  M       S     +L+  +V          
Sbjct: 39  GNFGVSNEFQ-----NVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVS 93

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVI---------QRGFVPNIVTCNKI 219
           L R +      V+EF+++      V+ +   MHR  +         ++G   N VT   +
Sbjct: 94  LFREIHKLRIPVHEFILSI-----VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTL 148

Query: 220 LKRLCINGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++ L    ++ +A  LF  L+     +PN V + T++N  CK+   +KAF L  LM +  
Sbjct: 149 IRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS 208

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             P+   Y+I+ID   K G L     LL     + +  D+  +S+++DA   +       
Sbjct: 209 TKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVR 268

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             +  M++    PNV +++ +I GLC++G++ +A  +   ++ + ++P ++TY+ +IDG+
Sbjct: 269 TLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY 328

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
              G++     ++D+MI + ++PD +  ++LING      + +A++   +  +  L P++
Sbjct: 329 GLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSI 388

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
              N L+ G   L R       F  M      PD+ TH  L+ G    G +  A+  F +
Sbjct: 389 VTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHK 448

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           + +R    ++  Y+A+I GL K   +      F+ +   G+ PD+  Y  +++   +E  
Sbjct: 449 LERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGL 508

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           LD A  +  ++ D G   D  TYN I+ G+   N
Sbjct: 509 LDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSN 542



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/370 (21%), Positives = 177/370 (47%), Gaps = 57/370 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS--------NSVGQY 166
           Y+ +I+ + + G +D +  +   M    I   PD+     S L+D+        N    +
Sbjct: 216 YTIVIDAFCKDGMLDGATSLLNEMKQKSI--PPDIFT--YSTLIDALCKLSQWENVRTLF 271

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            ++         C +  +++GL ++G +E+A  + R +I++G  P+++T N I+    + 
Sbjct: 272 LEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLR 331

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           GQ+  A  +FD ++    +P++++++ LIN + ++ K+++A Q+   + +  L P ++  
Sbjct: 332 GQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTC 391

Query: 287 SILIDGLFKAGRLKEG----------------------------NELLLTALDRGLKLD- 317
           ++L+ GLF+ GR K                              N L+  A+    KL+ 
Sbjct: 392 NVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLER 451

Query: 318 ------VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
                 + ++++V+D     G + +A  T++++   G  P+VI+Y+ +I G CQ+G L E
Sbjct: 452 RREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDE 511

Query: 372 ACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           A     + ++R++E         TY+ ++ GF +S K+ +  +  + +  +    +A   
Sbjct: 512 A-----KDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATV 566

Query: 427 SLLINGLMGD 436
            LL++ +  D
Sbjct: 567 ELLMDIIAED 576



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 143/292 (48%), Gaps = 12/292 (4%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYK 168
           C ++ +I+   + GK++++ EI  YM + G+   PD++   M  ++D       V +  +
Sbjct: 284 CTFNSVIDGLCKEGKVEDAEEIMRYMIEKGV--DPDVITYNM--IIDGYGLRGQVDRARE 339

Query: 169 LCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           +  +M  K        Y  L+NG  R+  I+ A  + R++ Q+G  P+IVTCN +L  L 
Sbjct: 340 IFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLF 399

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+  +A + FD +L  G  P++ T  TL+  + K   +E+A   ++ +       ++ 
Sbjct: 400 ELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQ 459

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           IY+ +IDGL K G+L + +         GL  DV+ +++++  Y   G +  A     +M
Sbjct: 460 IYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM 519

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
            + G L +  +Y+++++G  +  ++ E      ++  +       T   L+D
Sbjct: 520 EDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 244/514 (47%), Gaps = 19/514 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLC 170
           Y+ LI  Y +   +DE+  ++  M   G+   PD+V   +S LVD         + Y L 
Sbjct: 260 YTALIGEYCKGKGMDEAFSLYEGMVRSGVL--PDVVT--LSALVDGLCRDGQFSEAYALF 315

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           R M   G       Y  L++ L +      +  +  +++ RG V ++V    ++ RL   
Sbjct: 316 REMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKE 375

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+I  A  +          PN VT++ L++A C+   ++ A Q+   M E  ++P+++ +
Sbjct: 376 GKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTF 435

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           S +I+GL K G L +  + +    D G+  +VV + +++D +        A+  Y  ML+
Sbjct: 436 SSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLH 495

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G   N      L+ GL + G +  A  LF  +  R L    + Y++L+DG  K+G +  
Sbjct: 496 EGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPA 555

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
            F +   ++++ L PDAVV ++ IN     G   +A  F  +     L P+   +NT++ 
Sbjct: 556 AFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIA 615

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             CR  + +  +KL   M   +IKP++IT+T L+ G+   G +  A  L  +M   G  P
Sbjct: 616 ARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAP 675

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
             +T+  ++      +   V L + +LM   G+  DI +YN L+++L        A  + 
Sbjct: 676 TSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVL 735

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
            ++  RG+ PD IT+N +I G+C   S  +D  F
Sbjct: 736 DEMLTRGIAPDTITFNALILGHC--KSSHLDNAF 767



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 239/524 (45%), Gaps = 14/524 (2%)

Query: 93  QFGKTYNFFRLFRDSLG--DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           QF + Y  FR   D +G       Y  LI++  +  +  ES+ +   M   G+ +   + 
Sbjct: 307 QFSEAYALFREM-DKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRG----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             LM  L     + +   + R  +       F  Y  L++   R G I+ A  +  Q+ +
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE 425

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +  +PN+VT + I+  L   G +G A+     +   G  PNVVT+ TLI+ F K    E 
Sbjct: 426 KSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEA 485

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVVVFSSVM 325
           A  +Y  M+   +  +  +   L++GL K G + EG E L   +D RGL LD V ++++M
Sbjct: 486 ALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNI-EGAEALFKDMDERGLLLDHVNYTTLM 544

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           D     G++  A +    ++     P+ + Y++ I  LC  G+  EA     ++    LE
Sbjct: 545 DGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLE 604

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL----RFF 441
           P   TY+++I   C+ GK      L   M +  +KP+ +  + L+ GL+   +    +F 
Sbjct: 605 PDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFL 664

Query: 442 FQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
              +      P       ++  C   +R    +++  LM    +  D+  +  L+  +  
Sbjct: 665 LNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCC 724

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G   +A ++  +ML RG+ PD IT++A+I G  K  ++     ++  M   G++P+IA 
Sbjct: 725 HGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIAT 784

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +N LL  L     +  A  +   +   GLEP+ +TY+ ++ GY 
Sbjct: 785 FNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYA 828



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 237/495 (47%), Gaps = 9/495 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI+ Y ++  +  ++ +   M+  G+ L       L++    S       ++   M+
Sbjct: 190 WNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMK 249

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+    +   ++ AF ++  +++ G +P++VT + ++  LC +GQ  
Sbjct: 250 ADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFS 309

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +LF  +  +G  PN VT+ TLI++  K  +  ++  L   M+   +V DL++Y+ L+
Sbjct: 310 EAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALM 369

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L K G+++E  ++L  A    +  + V ++ ++DA+   G++  A Q   +M     +
Sbjct: 370 DRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVI 429

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV+++S +I GL ++G L +A     ++    + P+++TY +LIDGF K         +
Sbjct: 430 PNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDV 489

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           Y +M+  G++ +  V   L+NGL  +     A   F       L+ +   + TLMDG  +
Sbjct: 490 YRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFK 549

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                   K+   +   N+ PD + + V I  + + G  S A     +M   GL PD  T
Sbjct: 550 TGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQAT 609

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ +I    +    S  L + K M+RN + P++  Y  L+  L++   +  A  L  ++ 
Sbjct: 610 YNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMA 669

Query: 586 DRGLEPDIITYNTII 600
             G  P  +T+  ++
Sbjct: 670 SAGFAPTSLTHQRVL 684



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/573 (23%), Positives = 260/573 (45%), Gaps = 50/573 (8%)

Query: 44  KTNNPTPAIQFFKWT----HNCVSSPNIAQLIHVLLQSDMRDVA------SHVFDKMVIQ 93
           +++N TP   F  +T     +C +  NI     VLLQ + + V       S + + +V +
Sbjct: 389 QSDNITP--NFVTYTVLVDAHCRAG-NIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKR 445

Query: 94  --FGKTYNFFRLFRDS-LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
              GK  ++ R  +DS +      Y  LI+ + +    + +++++  M   G+  +  +V
Sbjct: 446 GCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVV 505

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L++ L  + ++     L + M  +G  +    Y  LM+GL + G +  AF + +++++
Sbjct: 506 DSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELME 565

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +   P+ V  N  +  LC  G+   A S    +   G +P+  T++T+I A C+E K  K
Sbjct: 566 KNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSK 625

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A +L   M    + P+LI Y+ L+ GL +AG +K+   LL      G     +    V+ 
Sbjct: 626 ALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQ 685

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           A  G       ++ ++ M+  G   ++  Y+ L+  LC  G    A  +  ++L R + P
Sbjct: 686 ACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAP 745

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
             +T+++LI G CKS  L + F++Y  M+ +GL                           
Sbjct: 746 DTITFNALILGHCKSSHLDNAFAIYAQMLHQGLS-------------------------- 779

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
               PN+  FNTL+ G     R  +   +   M    ++P+ +T+ +L+ G A + +   
Sbjct: 780 ----PNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVE 835

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A+ L+ +M+ +G  P   TY++++    K   ++    +F  M+R GV    + Y++LLN
Sbjct: 836 ALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLN 895

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              K  N      L   + + G +P   T +++
Sbjct: 896 GWSKLRNGIEVRILLKDMKELGFKPSKGTISSM 928



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 229/470 (48%), Gaps = 8/470 (1%)

Query: 142 GIYLSPDLVQRLMSCLV-DSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHM 200
           G+ +S  LV    + LV ++ ++ +     R + G     +  L++G  +   +  A  +
Sbjct: 150 GVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAV 209

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             ++  +G   ++V  N ++     +G    A  + + +   G +PNVVT++ LI  +CK
Sbjct: 210 VERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCK 269

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
              +++AF LY  M+   ++PD++  S L+DGL + G+  E   L       G+  + V 
Sbjct: 270 GKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVT 329

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           + +++D+         ++     M++ G + +++ Y+ L+  L ++G++ EA  +     
Sbjct: 330 YCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQ 389

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
              + P+ +TY+ L+D  C++G +     +   M ++ + P+ V  S +INGL     +G
Sbjct: 390 SDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLG 449

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
            A  +  +     + PN+  + TL+DG  + +     + ++  M    ++ +      L+
Sbjct: 450 KAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLV 509

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK-LMERNGV 554
            G+   G++  A  LF  M +RGL  D + Y+ ++ GLFK  N+     + + LME+N +
Sbjct: 510 NGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN-L 568

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +PD  +YNV +N L        A     ++ + GLEPD  TYNT+I   C
Sbjct: 569 SPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARC 618



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 214/444 (48%), Gaps = 18/444 (4%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y   +  L  +G    A  +  ++ +RG   + VT +  L  LC  G +G A++L ++L+
Sbjct: 118 YNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLV 177

Query: 241 LVG--PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
                   +VV ++ LI+ +CK   +  A  +   M    +  D++ Y+ L+ G F +G 
Sbjct: 178 RGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGD 237

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
                E++      G++ +VV +++++  Y     +  A   Y+ M+  G LP+V++ S 
Sbjct: 238 ADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSA 297

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ GLC+ G+  EA  LF ++    + P+ +TY +LID   K+ +  +   L   M+ RG
Sbjct: 298 LVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRG 357

Query: 419 LKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           +  D V+ + L++     G + +A      +    + PN   +  L+D  CR        
Sbjct: 358 VVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAE 417

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           ++ + M   ++ P+V+T + +I G+  +G L  A     +M   G+ P+V+TY  +I G 
Sbjct: 418 QVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGF 477

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           FK +     L +++ M   GV  +  + + L+N L K  N++ A  LF  + +RGL  D 
Sbjct: 478 FKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDH 537

Query: 594 ITYNTIICGYCSLNSCLIDGYFKS 617
           + Y T           L+DG FK+
Sbjct: 538 VNYTT-----------LMDGLFKT 550



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/501 (23%), Positives = 228/501 (45%), Gaps = 9/501 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ + R G ID + ++   M +  +  +      +++ LV    +G+     R M+
Sbjct: 400 YTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMK 459

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++G  +    E A  ++R ++  G   N    + ++  L  NG I 
Sbjct: 460 DSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIE 519

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +LF  +   G   + V ++TL++   K   +  AF++   +ME +L PD ++Y++ I
Sbjct: 520 GAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFI 579

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + L   G+  E    L    + GL+ D   +++++ A    G   +A++    M      
Sbjct: 580 NCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIK 639

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN+I+Y+ L+ GL + G + +A  L  ++      P+ LT+  ++     S +      +
Sbjct: 640 PNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEI 699

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++ M+  GL  D  V + L++     G+  +A     + +   + P+   FN L+ G C+
Sbjct: 700 HELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCK 759

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                +   ++  M    + P++ T   L+ G+ S G +  A  +   M K GL P+ +T
Sbjct: 760 SSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLT 819

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y  ++ G  K  N    L ++  M   G  P  + YN L++   K   ++ A +LF ++ 
Sbjct: 820 YDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMK 879

Query: 586 DRGLEPDIITYNTIICGYCSL 606
            RG+     TY+ ++ G+  L
Sbjct: 880 RRGVLHTSSTYDILLNGWSKL 900



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 186/422 (44%), Gaps = 58/422 (13%)

Query: 244 PKP-NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD----LVPDLIIYSILIDGLFKAGR 298
           P P + +T +++I ++C    L  A  L            +  D + Y+I +  L + G 
Sbjct: 71  PVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGH 130

Query: 299 LKEGNELLLTALDRGLKLD-------------------------------------VVVF 321
            +    +L     RG+  D                                     VV +
Sbjct: 131 GRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGW 190

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++D Y  + D+  A+   +RM   G   +V+ Y+ L+ G    G    A  +  ++  
Sbjct: 191 NALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKA 250

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD----- 436
             +EP+++TY++LI  +CK   + + FSLY+ M++ G+ PD V  S L++GL  D     
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A   F +  ++ + PN   + TL+D   + +R ++++ L   M    +  D++ +T L+ 
Sbjct: 311 AYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMD 370

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
            +  +G +  A  +        +TP+ +TY+ ++    +  NI     +   ME   V P
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
           ++  ++ ++N L+K   L  A     ++ D G+ P+++TY T           LIDG+FK
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGT-----------LIDGFFK 479

Query: 617 SQ 618
            Q
Sbjct: 480 FQ 481



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 41/196 (20%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+ G  +   ++NAF ++ Q++ +G  PNI T N +L  L   G+IG A ++   +
Sbjct: 749 TFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDM 808

Query: 240 LLVGPKPN-----------------------------------VVTFSTLINAFCKEAKL 264
             VG +PN                                     T+++L++ F K   +
Sbjct: 809 KKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMM 868

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE---LLLTALDRGLKLDVVVF 321
            +A +L++ M    ++     Y IL++G  K   L+ G E   LL    + G K      
Sbjct: 869 NQAKELFSEMKRRGVLHTSSTYDILLNGWSK---LRNGIEVRILLKDMKELGFKPSKGTI 925

Query: 322 SSVMDAYVGIGDVGRA 337
           SS+  A+   G  G A
Sbjct: 926 SSMSRAFSRPGMTGEA 941


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 233/490 (47%), Gaps = 11/490 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE--- 182
           G+I +++ +   M   G    P +   ++             ++   +  +G C  +   
Sbjct: 136 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG-CALDVGN 194

Query: 183 --FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
              ++N +  +G ++ A H+ R +   G  P++V+ N +LK LC+  + G    L + ++
Sbjct: 195 CNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV 254

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +   PN+VTF+TLI+  C+    E+  ++   M E    PD+ +Y+ +IDG+ K G LK
Sbjct: 255 RMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLK 314

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
             +E+L      GLK +VV +++++             +    M +     + ++++IL+
Sbjct: 315 VAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILV 374

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              CQ G +     L  Q+L+    P ++TY+++I+GFCK G + +   L  +M   G K
Sbjct: 375 DFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCK 434

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ +  ++++ GL       DA     Q ++     N   FNTL++  C+       ++L
Sbjct: 435 PNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIEL 494

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M +    PD+I+++ +I G+   G    A+ L   M+ +G++P+ I YS+I   L +
Sbjct: 495 LKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSR 554

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              I+  + MF  ++   +  D  +YN +++ L K    + A++    +   G  P+  T
Sbjct: 555 EGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNEST 614

Query: 596 YNTIICGYCS 605
           Y  +I G  S
Sbjct: 615 YTILIRGLAS 624



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 196/431 (45%), Gaps = 16/431 (3%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++ G  R G +E+A  +   V      PN  T   +++ LC  G+I +A ++ D + 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P    +  ++ A C+      A ++   +       D+   +++++ +   G + 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +   LL      G + DVV +++V+         G   +  + M+     PN+++++ LI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC+ G       +  Q+      P +  Y+++IDG CK G L+    + + M   GLK
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF---------IFNTLMDGCCRLKRATD 471
           P+ V  + L+ GL   A R+        L+  +F          FN L+D  C+      
Sbjct: 330 PNVVCYNTLLKGLCS-AERWEETE---ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDR 385

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++L   M ++   PDVIT+T +I G   +G +  A++L   M   G  P+ I+Y+ ++ 
Sbjct: 386 VIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL   +       +   M + G   +   +N L+N L K+  ++ A++L  Q+   G  P
Sbjct: 446 GLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 505

Query: 592 DIITYNTIICG 602
           D+I+Y+T+I G
Sbjct: 506 DLISYSTVIDG 516



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 118/262 (45%), Gaps = 39/262 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  + + G IDE+V +   M+  G   +      ++  L  +        L   M 
Sbjct: 405 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       +  L+N L +KG++E A  + +Q++  G  P++++ + ++  L   G+  
Sbjct: 465 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L +V++  G  PN + +S++ +A  +E ++ K  Q+++ + +  +  D ++Y+ +I
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 584

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K G  +                                   RA++    M++ G +
Sbjct: 585 SSLCKRGETE-----------------------------------RAIEFLAYMVSSGCV 609

Query: 351 PNVISYSILIKGLCQQGRLVEA 372
           PN  +Y+ILI+GL  +G + EA
Sbjct: 610 PNESTYTILIRGLASEGFVKEA 631



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 3/149 (2%)

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G CR  +     +L        + P+  T+  ++R + ++G ++ A+ +  +M 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           +RG  P    Y  I+    +G      + + + +   G A D+   N++LN +  + ++D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            AL L   L   G EPD+++YN ++ G C
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLC 238



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/251 (18%), Positives = 94/251 (37%), Gaps = 36/251 (14%)

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           +  S LI+ LC  GR  EA      +        ++ Y++++ G+C++G+L     L   
Sbjct: 59  VRLSSLIRSLCAAGRTAEA---ARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRL--- 112

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
                                         +  + + PN + +  ++   C   R  D +
Sbjct: 113 ------------------------------AAAVPVPPNAYTYFPVVRALCARGRIADAL 142

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +   M      P    + V++      G   SA+ +   +  RG   DV   + +++ +
Sbjct: 143 AVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAI 202

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
               ++   LH+ + +   G  PD+  YN +L  L          +L  ++      P+I
Sbjct: 203 CDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNI 262

Query: 594 ITYNTIICGYC 604
           +T+NT+I   C
Sbjct: 263 VTFNTLISYLC 273


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 226/451 (50%), Gaps = 11/451 (2%)

Query: 165 QYYKLCRAMRG--KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR----GFVPNIVTCNK 218
           Q +   R M      F     L+NGL++ G ++ A  ++ +++Q     G V +  T + 
Sbjct: 151 QLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSI 210

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++K LC  G+I     L          P+VV ++ +I+ +CK+  L+ A +  N +    
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           ++P +  Y  LI+G  KAG  +  ++LL     RGL ++V VF++V+DA    G V  A 
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAA 330

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           +   RM   G  P++ +Y+I+I   C+ GR+ EA  L  +   R L P+  +Y+ L+  +
Sbjct: 331 EMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAY 390

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRMTLIPNL 453
           CK G       +   + + G K D V     I+G++  G+   AL    + +   + P+ 
Sbjct: 391 CKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDA 450

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
            I+N LM G C+  R      L   M   N++PDV     LI G    G L  AI +F  
Sbjct: 451 QIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKV 510

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           ++++G+ P ++ Y+A+I G  K   ++  L     M     APD   Y+ +++  +K+ +
Sbjct: 511 IIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHD 570

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + +ALK+FGQ+     +P++ITY ++I G+C
Sbjct: 571 MSSALKMFGQMMKHKFKPNVITYTSLINGFC 601



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 148/612 (24%), Positives = 295/612 (48%), Gaps = 41/612 (6%)

Query: 12  WRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLI 71
           W+   +   +ESK  +SD+    A+ ++    + ++    ++FF W     + P    L 
Sbjct: 45  WQDPLESRFAESKVVVSDV----AHFVID---RVHDAELGLKFFDWAS---TRPFSCSLD 94

Query: 72  HVLLQSDMRDVASH-VFDK--MVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKI 128
            V   S ++ +AS+ VF +  +V++  K  +  +  R++       +S LI  Y   G +
Sbjct: 95  GVAHSSLLKLLASYRVFPEIELVLENMKAQHL-KPTREA-------FSALILAYAESGSL 146

Query: 129 DESVEIFAYMSDMG----IYLSPDLVQRLMSCLVDSNSVGQ----YYKLCRAMRGKGFCV 180
           D ++++F  + +M      +++ +L   L++ LV S  V      Y K+ +   G G  V
Sbjct: 147 DRALQLFHTVREMHNCFPTFVASNL---LLNGLVKSGKVDVALQLYDKMLQTDDGTGAVV 203

Query: 181 YEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
             +    ++ GL   G IE    + +    +  VP++V  N I+   C  G +  A+   
Sbjct: 204 DNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRAL 263

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + L + G  P V T+  LIN FCK  + E   QL   M    L  ++ +++ +ID  +K 
Sbjct: 264 NELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKY 323

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G + E  E+L    + G   D+  ++ +++     G +  A +  ++    G LPN  SY
Sbjct: 324 GLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSY 383

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + L+   C++G  V+A G+  ++     +  L++Y + I G   +G++     + + M++
Sbjct: 384 TPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMME 443

Query: 417 RGLKPDAVVCSLLINGLMGD----ALRFFF-QSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           +G+ PDA + ++L++GL       A++    + +   + P++++F TL+DG  R     +
Sbjct: 444 KGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDE 503

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            +K+F ++    + P ++ +  +I+G    G ++ A+    +M      PD  TYS +I 
Sbjct: 504 AIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVID 563

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G  K  ++S  L MF  M ++   P++  Y  L+N   K+ ++  A K+F  +    L P
Sbjct: 564 GYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVP 623

Query: 592 DIITYNTIICGY 603
           +++TY T++ G+
Sbjct: 624 NVVTYTTLVGGF 635



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 148/587 (25%), Positives = 272/587 (46%), Gaps = 48/587 (8%)

Query: 51  AIQFF---KWTHNCVSSPNIAQLI-HVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRD 106
           A+Q F   +  HNC  +   + L+ + L++S   DVA  ++DKM+              D
Sbjct: 149 ALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQT-----------DD 197

Query: 107 SLGDFGCDY--SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN-SV 163
             G    +Y  S +++    +GKI+E   +  +    G    P +V    + ++D     
Sbjct: 198 GTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHR--WGKCCVPHVV--FYNMIIDGYCKK 253

Query: 164 GQYYKLCRA---MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
           G      RA   ++ KG       Y  L+NG  + G  E    +  ++  RG   N+   
Sbjct: 254 GDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVF 313

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++      G +  A+ +   +  +G  P++ T++ +IN  CK  ++E+A +L     E
Sbjct: 314 NNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKE 373

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             L+P+   Y+ L+    K G   + + +L    + G K D+V + + +   V  G++  
Sbjct: 374 RGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDV 433

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+   ++M+  G  P+   Y+IL+ GLC++GR+     L  ++L R ++P +  +++LID
Sbjct: 434 ALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLID 493

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           GF ++G+L +   ++  +I++G+ P  V  + +I G      M DAL    +   +   P
Sbjct: 494 GFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAP 553

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           + + ++T++DG  +    +  +K+F  M  +  KP+VIT+T LI G   +  +  A  +F
Sbjct: 554 DEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVF 613

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI-- 569
             M    L P+V+TY+ ++ G FK         +F+LM  NG  P+ A ++ L+N L   
Sbjct: 614 SGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNT 673

Query: 570 ------------KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
                       KE      L  F  +   G +  I  YN++I   C
Sbjct: 674 ATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLC 720



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 224/508 (44%), Gaps = 48/508 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI  + + G+ +   ++   M+  G+ ++  +   ++        V +  ++ R M 
Sbjct: 278 YGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMA 337

Query: 175 ----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
               G     Y  ++N   + G IE A  +  +  +RG +PN  +   ++   C  G   
Sbjct: 338 EMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYV 397

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS +   +  +G K ++V++   I+      +++ A  +   MME  + PD  IY+IL+
Sbjct: 398 KASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILM 457

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K GR+     LL   LDR ++ DV VF++++D ++  G++  A++ +  ++  G  
Sbjct: 458 SGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVD 517

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P ++ Y+ +IKG C+ G++ +A     ++      P   TYS++IDG+ K   +     +
Sbjct: 518 PGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKM 577

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +  M+K   KP+ +  + LING                               C+     
Sbjct: 578 FGQMMKHKFKPNVITYTSLINGF------------------------------CKKADMI 607

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              K+F  M  +++ P+V+T+T L+ G    G    A  +F  ML  G  P+  T+  +I
Sbjct: 608 RAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLI 667

Query: 531 HGLF--------------KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL               K    S+ L  F +M  +G    IA YN ++  L K   +D 
Sbjct: 668 NGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDT 727

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A  L  ++  +G   D + +  ++ G C
Sbjct: 728 AQLLLTKMLTKGFLIDSVCFTALLHGLC 755



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 163/398 (40%), Gaps = 88/398 (22%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y   I   V  G+ID ++ +   M + G++    +   LMS L     +     L   M 
Sbjct: 418 YGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEML 477

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +       V+  L++G +R G ++ A  + + +I++G  P IV  N ++K  C  G++ 
Sbjct: 478 DRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMT 537

Query: 231 NASS-----------------------------------LFDVLLLVGPKPNVVTFSTLI 255
           +A S                                   +F  ++    KPNV+T+++LI
Sbjct: 538 DALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI 597

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN---ELLL----- 307
           N FCK+A + +A ++++ M   DLVP+++ Y+ L+ G FKAG+ +      EL+L     
Sbjct: 598 NGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCL 657

Query: 308 ---------------TAL-------------DRGLKLD-------------VVVFSSVMD 326
                          TA              +R L LD             +  ++SV+ 
Sbjct: 658 PNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIV 717

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G V  A     +ML  GFL + + ++ L+ GLC +G+  E   +    L +    
Sbjct: 718 CLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQ 777

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + + YS  +D +   G+L +   +   +++     D V
Sbjct: 778 TAVKYSLTLDKYLYQGRLSEASVILQTLVEDSKFSDQV 815



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 118/296 (39%), Gaps = 45/296 (15%)

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC-------------- 399
           +++S L+K L       E   +   +  + L+P+   +S+LI  +               
Sbjct: 96  VAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHT 155

Query: 400 ----------------------KSGKLRDGFSLYDNMIKRGLKPDAVV----CSLLINGL 433
                                 KSGK+     LYD M++      AVV     S+++ GL
Sbjct: 156 VREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGL 215

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                + +  R          +P++  +N ++DG C+        +    + M  + P V
Sbjct: 216 CNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTV 275

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
            T+  LI G    G   +   L  +M  RGL  +V  ++ +I   +K   ++    M + 
Sbjct: 276 ETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRR 335

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M   G  PDI  YN+++N   K   ++ A +L  +  +RGL P+  +Y  ++  YC
Sbjct: 336 MAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYC 391



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           D + H+ L++ +AS        L+   M  + L P    +SA+I    +  ++   L +F
Sbjct: 94  DGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLF 153

Query: 547 KLM-ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL--TDRGLEPDIITYNT--IIC 601
             + E +   P     N+LLN L+K   +D AL+L+ ++  TD G    +  Y T  ++ 
Sbjct: 154 HTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVK 213

Query: 602 GYCSL 606
           G C+L
Sbjct: 214 GLCNL 218


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 150/572 (26%), Positives = 259/572 (45%), Gaps = 61/572 (10%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAI-QFFKWTHNCVSSPNIAQLIHVLLQSDMRD 81
           S+ H    + N   +   +L+   NPTP I QF K   + V + + +  + +  Q ++  
Sbjct: 41  SQLHHHQDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNG 100

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           + S  F         T+N                  LI  + ++G    S  +F  +   
Sbjct: 101 IVSDFF---------TFNI-----------------LINCFSQLGLNSLSFSVFGKILKK 134

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENA 197
           G   +      L+  L     + Q       +  +GF +    Y  L+NGL + G I  A
Sbjct: 135 GFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAA 194

Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
             + ++V  +   PN V  N I+  +C    + +A  L+  ++     P+  T ++LI  
Sbjct: 195 LQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYG 254

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           FC   +L++A  L + M+  ++ P +  +SIL+D   K G++KE   +L   + + + LD
Sbjct: 255 FCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILD 314

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           VV ++S+MD Y  + ++ +A   +D M + G + NV SY+ +I GLC+   + EA  LF 
Sbjct: 315 VVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFE 374

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
           ++  R++ P+++TY+SLIDG  K GK+     L D M  RG +P                
Sbjct: 375 EMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRG-QP---------------- 417

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                        PN+  +N+++D  C+       + L   +    I+PD+ T+TVLI+G
Sbjct: 418 -------------PNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKG 464

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G L  A  +F  +L +G   DV TY+ +I G          L +   ME NG  P+
Sbjct: 465 LCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPN 524

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
              Y +++  L ++   D A KL  ++  RGL
Sbjct: 525 AKTYEIVILSLFEKDENDMAEKLLREMIARGL 556



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 214/426 (50%), Gaps = 5/426 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++ L++      A  +H+Q+   G V +  T N ++      G    + S+F  +L  G
Sbjct: 76  ILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKG 135

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN +TF+TLI   C +  + +A   ++ ++      D + Y  LI+GL K GR+    
Sbjct: 136 FDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAAL 195

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +LL     + ++ + V+++ ++D       V  A   Y +M+     P+  + + LI G 
Sbjct: 196 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGF 255

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C  G+L EA GL  ++++  + P + T+S L+D FCK GK+++   +    +K+ +  D 
Sbjct: 256 CIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDV 315

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  + L++G      +  A   F       +I N+  + T+++G C++K   + V LF  
Sbjct: 316 VTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEE 375

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    I P+V+T+  LI G+   G +S  + L  +M  RG  P++ITY++I+  L K  +
Sbjct: 376 MRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHH 435

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   + +   ++  G+ PD+  Y VL+  L +   L+ A K+F  L  +G   D+ TY  
Sbjct: 436 VDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTV 495

Query: 599 IICGYC 604
           +I G+C
Sbjct: 496 MIQGFC 501



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 236/466 (50%), Gaps = 11/466 (2%)

Query: 146 SPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFH 199
           +P ++Q  +++S LV +        L + M   G    F  +  L+N   + G+   +F 
Sbjct: 67  TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS 126

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +  +++++GF PN +T N ++K LC+ G I  A +  D ++  G   + V++ TLIN  C
Sbjct: 127 VFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLC 186

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           K  ++  A QL   +    + P+ ++Y+++ID + KA  + +  +L    + + +  D  
Sbjct: 187 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDF 246

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
             +S++  +  +G +  AV    +M+     P + ++SIL+   C++G++ EA  + G  
Sbjct: 247 TCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVT 306

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----MG 435
           + + +   ++TY+SL+DG+C   ++     ++D+M  RG+  +    + +INGL    M 
Sbjct: 307 MKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMV 366

Query: 436 DALRFFFQSVR-MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
           D     F+ +R   +IPN+  +N+L+DG  +L + +  +KL   M      P++IT+  +
Sbjct: 367 DEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSI 426

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           +  +     +  AI L   +  +G+ PD+ TY+ +I GL +   +     +F+ +   G 
Sbjct: 427 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGY 486

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             D+  Y V++     +   DAAL L  ++ D G  P+  TY  +I
Sbjct: 487 NLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVI 532



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 139/296 (46%), Gaps = 9/296 (3%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           ++ F+ ++ + V       A+  + +M   G + +  +++ILI    Q G    +  +FG
Sbjct: 70  IIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFG 129

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
           ++L +  +P+ +T+++LI G C  G +    + +D ++ +G   D V    LINGL    
Sbjct: 130 KILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVG 189

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            +  AL+   +     + PN  ++N ++D  C+ K   D   L+  M    I PD  T  
Sbjct: 190 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCN 249

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G    G L  A+ L  +M+   + P + T+S ++    K   +     M  +  + 
Sbjct: 250 SLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKK 309

Query: 553 GVAPDIAIYNVLLN--MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +  D+  YN L++   L+KE N   A  +F  +  RG+  ++ +Y T+I G C +
Sbjct: 310 DIILDVVTYNSLMDGYCLVKEIN--KAKDIFDSMASRGVIANVQSYTTMINGLCKI 363



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 73/154 (47%)

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P +  FN ++    + K  +  + L   M +  I  D  T  +LI   +  G  S +  +
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F ++LK+G  P+ IT++ +I GL    +I   L+    +   G   D   Y  L+N L K
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              + AAL+L  ++  + ++P+ + YN II   C
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMC 221



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 47/233 (20%), Positives = 92/233 (39%), Gaps = 44/233 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+   ++GKI   +++   M D G    P+++    ++  L  ++ V +   L   
Sbjct: 388 YNSLIDGLGKLGKISCVLKLVDEMHDRG--QPPNIITYNSILDALCKNHHVDKAIALLTN 445

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           ++ +G       Y  L+ GL + G +E+A  +   ++ +G+                   
Sbjct: 446 LKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGY------------------- 486

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
                             +V T++ +I  FC +   + A  L + M +   +P+   Y I
Sbjct: 487 ----------------NLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEI 530

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +I  LF+        +LL   + RGL LD   +  +     G+  +G A   Y
Sbjct: 531 VILSLFEKDENDMAEKLLREMIARGL-LDEKSYIYLASKETGVMGMGAAGTVY 582


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 241/530 (45%), Gaps = 38/530 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI     +G++DE + IF  M +   Y +      ++  L +S    +   L   MR
Sbjct: 42  YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMR 101

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  ++N + ++  +E    +  +++++G VP++ T N ++   C  G + 
Sbjct: 102 ERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVE 161

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + D++      PN  T++ LI  FC++  + +A  L + M+E  L P ++ Y+ LI
Sbjct: 162 AAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLI 221

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K G L     LL    + G+  D   +S  +D     G +  A   ++ +   G  
Sbjct: 222 HGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIK 281

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            N + Y+ LI G C+ G++ +A  L  ++L     P+  TY++LIDG CK  K+++   L
Sbjct: 282 ANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLL 341

Query: 411 YDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            ++MI++GLK      ++LI  ++  GD   A R   Q V     P+++I+   +   C 
Sbjct: 342 MESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCT 401

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                +   +  +M    + PD +T+T++I      G L+ A  +  +M   G  P   T
Sbjct: 402 RGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHT 461

Query: 526 YSAIIHGLFKG------KNISV-----------------------GLHMFKLMERNGVAP 556
           YS +I  L K       KN+++                        L +F+ M  +G +P
Sbjct: 462 YSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSP 521

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +I  Y  L+  L K   L  A KLF  + +RG+ P    YN+++   C L
Sbjct: 522 NINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCEL 571



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 211/435 (48%), Gaps = 6/435 (1%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           G+C    L+   L   V  +AF +   + ++G   N V+   ++  LC  G++    ++F
Sbjct: 4   GYCKLGNLVEANLNNDV-NSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIF 62

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             +      P V T++ +++A  +  +  +A  L++ M E    P++  Y+++I+ + K 
Sbjct: 63  KKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKE 122

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
            +L+EG  +L   +++GL   V  +++++D Y   G V  A +  D M +    PN  +Y
Sbjct: 123 TKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTY 182

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI G C++  +  A  L  ++L  RL PS++TY+SLI G CK G L   + L + M +
Sbjct: 183 NELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNE 242

Query: 417 RGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATD 471
            G+ PD    S+ I+ L      +     F S++   I  N  I+  L+DG C+  +  D
Sbjct: 243 NGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDD 302

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              L   M   +  P+  T+  LI G+  +  +  A+LL   M+++GL   V TY+ +I 
Sbjct: 303 ANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIV 362

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            + K  +      +   M  +G  PD+ IY   ++      N+  A  +   + +RG+ P
Sbjct: 363 AMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMP 422

Query: 592 DIITYNTIICGYCSL 606
           D +TY  +I  Y  L
Sbjct: 423 DALTYTLVIDAYGGL 437



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 232/493 (47%), Gaps = 7/493 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y + G ++ + EI   M       +      L+       +V +   L   M 
Sbjct: 147 YNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKML 206

Query: 175 GK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L++G  + G +++A+ +   + + G VP+  T +  +  LC  G+I 
Sbjct: 207 ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIE 266

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ LF+ L   G K N V ++ LI+ +CK  K++ A  L + M+  D +P+   Y+ LI
Sbjct: 267 EANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALI 326

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K  +++E   L+ + + +GLK  V  ++ ++ A +  GD   A +  D+M++ G+ 
Sbjct: 327 DGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQ 386

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V  Y+  I   C +G + EA  +   +  R + P  LTY+ +ID +   G L   F +
Sbjct: 387 PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDV 446

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM-TLIPNLFIFNTLMDGCCRLKRA 469
              M   G  P     S LI  L+ + L   +++V +   IPN+F F  + D    +K  
Sbjct: 447 LKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVF-FADVADVWKMMKFE 505

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           T  ++LF  M  +   P++ T+  LI G+   G L  A  LF  M +RG++P    Y+++
Sbjct: 506 T-ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSL 564

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           ++   +       + +   M  +G  P +   NVL   L +E + + A  +F  L   G 
Sbjct: 565 LNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGY 624

Query: 590 EPDIITYNTIICG 602
             D + +  +I G
Sbjct: 625 NDDEVAWKILIDG 637



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 155/325 (47%), Gaps = 39/325 (12%)

Query: 289 LIDGLFKAGRLKEGN---------ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +++G  K G L E N          +      +G + + V +++++     +G V   + 
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            + +M      P V +Y++++  L + GR +EA  LF ++  R  EP++ TY+ +I+  C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           K  KL +G  + D M+++G                              L+P++  +N L
Sbjct: 121 KETKLEEGRRILDEMVEKG------------------------------LVPSVPTYNAL 150

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG C+        ++  LM   +  P+  T+  LI G   + ++  A+ L  +ML+  L
Sbjct: 151 IDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRL 210

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
           TP V+TY+++IHG  K   +     +  LM  NGV PD   Y+V ++ L K+  ++ A  
Sbjct: 211 TPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANV 270

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           LF  L ++G++ + + Y  +I GYC
Sbjct: 271 LFNSLKEKGIKANEVIYTALIDGYC 295



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 213/511 (41%), Gaps = 45/511 (8%)

Query: 68  AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFR-------LFRDSLGDFGCDYSFLIE 120
           AQ I  L+ S+  +     +++++  F +  N  R       +    L      Y+ LI 
Sbjct: 163 AQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIH 222

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF-- 178
              +IG +D +  +   M++ G+          +  L     + +   L  +++ KG   
Sbjct: 223 GQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKA 282

Query: 179 --CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
              +Y  L++G  + G +++A  +  +++    +PN  T N ++  LC   ++  A  L 
Sbjct: 283 NEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLM 342

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + ++  G K  V T++ LI A  KE   + A ++ + M+     PD+ IY+  I      
Sbjct: 343 ESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTR 402

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G +KE  +++    +RG+  D + ++ V+DAY G+G +  A     RM + G  P+  +Y
Sbjct: 403 GNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTY 462

Query: 357 SILIKGLCQQG-----------------------------RLVEACGLFGQVLIRRLEPS 387
           S LIK L ++                              +   A  LF ++L     P+
Sbjct: 463 SCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPN 522

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
           + TY+ LI G CK G+L     L+D+M +RG+ P   + + L+N     G+ GDA+R   
Sbjct: 523 INTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVG 582

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             +    +P L   N L  G            +F  +       D +   +LI G+   G
Sbjct: 583 AMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNG 642

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
                  L   M  RG      TY  +I GL
Sbjct: 643 LSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 152/390 (38%), Gaps = 70/390 (17%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y + GK+D++  +   M       +      L+  L     V +   L  +M 
Sbjct: 287 YTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMI 346

Query: 175 GKGF-CV---YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG  C    Y  L+  +L++G  + A  +  Q++  G+ P++      +   C  G I 
Sbjct: 347 QKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIK 406

Query: 231 NASSL--------------------------------FDVL---LLVGPKPNVVTFSTLI 255
            A  +                                FDVL      G  P+  T+S LI
Sbjct: 407 EAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI 466

Query: 256 NAFCKEA-----------------------------KLEKAFQLYNLMMEMDLVPDLIIY 286
               KE                              K E A +L+  M+E    P++  Y
Sbjct: 467 KHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTY 526

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LI GL K GRL    +L     +RG+     +++S+++    +G  G AV+    M+ 
Sbjct: 527 AKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME 586

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G LP + S ++L  GL ++G   +A  +F  +L        + +  LIDG  K+G L D
Sbjct: 587 HGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNG-LSD 645

Query: 407 GFS-LYDNMIKRGLKPDAVVCSLLINGLMG 435
           G S L   M  RG +       +LI GL G
Sbjct: 646 GCSELLGVMEARGCQIHPQTYRMLIEGLDG 675


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 232/474 (48%), Gaps = 20/474 (4%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQR 207
           +M      N +     L R M   G CV     Y+ L++ L +   +  A  +  ++   
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHG-CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G VP+  T N ++  LC   +I  A+ + + +L+ G  P+ +T+  L+N  CK  +++ A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLKLDVVVFSSVMD 326
             L+  + +    P+++I++ LI G    GRL +   +L   +   G+  DV  ++S++ 
Sbjct: 342 KDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y   G VG A++    M N G  PNV SY+IL+ G C+ G++ EA  +  ++    L+P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
           + + ++ LI  FCK  ++ +   ++  M ++G KPD    + LI+GL     +  AL   
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
              +   ++ N   +NTL++   R     +  KL   M       D IT+  LI+G+   
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +  A  LF +ML+ G  P  I+ + +I+GL +   +   +   K M   G  PDI  +
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS----LNSCLI 611
           N L+N L +   ++  L +F +L   G+ PD +T+NT++   C      ++CL+
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 263/542 (48%), Gaps = 29/542 (5%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           ++ +L+  +   VA++VF  M+          R    +L  FG     +++ +  + +ID
Sbjct: 188 VLEILVSGNCHKVAANVFYDMLS---------RKIPPTLFTFG----VVMKAFCAVNEID 234

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFL 184
            ++ +   M+  G   +  + Q L+  L   N V +  +L   M   G CV     +  +
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG-CVPDAETFNDV 293

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           + GL +   I  A  M  +++ RGF P+ +T   ++  LC  G++  A  LF  +    P
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----P 349

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           KP +V F+TLI+ F    +L+ A   L +++    +VPD+  Y+ LI G +K G +    
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           E+L    ++G K +V  ++ ++D +  +G +  A    + M   G  PN + ++ LI   
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++ R+ EA  +F ++  +  +P + T++SLI G C+  +++    L  +MI  G+  + 
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  + LIN     G + +A +   + V      +   +N+L+ G CR         LF  
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      P  I+  +LI G+   G +  A+    +M+ RG TPD++T++++I+GL +   
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           I  GL MF+ ++  G+ PD   +N L++ L K   +  A  L  +  + G  P+  T++ 
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709

Query: 599 II 600
           ++
Sbjct: 710 LL 711



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 227/491 (46%), Gaps = 20/491 (4%)

Query: 128 IDESVEIFAYM-SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMN 186
           +  S+E+F++  S  G   S D+ Q L+  L  +       +L   M+ +G    E L  
Sbjct: 91  VSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFI 150

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI---GN----ASSLFDVL 239
            ++R    + A    +       + N+ +C    K   +  +I   GN    A+++F  +
Sbjct: 151 SIMRD--YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDM 208

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L     P + TF  ++ AFC   +++ A  L   M +   VP+ +IY  LI  L K  R+
Sbjct: 209 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 268

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  +LL      G   D   F+ V+        +  A +  +RML  GF P+ I+Y  L
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR-G 418
           + GLC+ GR+  A  LF     R  +P ++ +++LI GF   G+L D  ++  +M+   G
Sbjct: 329 MNGLCKIGRVDAAKDLF----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384

Query: 419 LKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           + PD    + LI      GL+G AL            PN++ +  L+DG C+L +  +  
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +   M    +KP+ +    LI     +  +  A+ +F +M ++G  PDV T++++I GL
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            +   I   L + + M   GV  +   YN L+N  ++   +  A KL  ++  +G   D 
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564

Query: 594 ITYNTIICGYC 604
           ITYN++I G C
Sbjct: 565 ITYNSLIKGLC 575



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 219/466 (46%), Gaps = 41/466 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI +  +  +++E++++   M  MG     +    ++  L   + + +  K+   M 
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314

Query: 175 GKGFC----VYEFLMNGLLRKGVIENA---------------------FHMHRQ------ 203
            +GF      Y +LMNGL + G ++ A                     F  H +      
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA 374

Query: 204 -----VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
                V   G VP++ T N ++      G +G A  +   +   G KPNV +++ L++ F
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           CK  K+++A+ + N M    L P+ + ++ LI    K  R+ E  E+      +G K DV
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
             F+S++     + ++  A+     M++ G + N ++Y+ LI    ++G + EA  L  +
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----- 433
           ++ +      +TY+SLI G C++G++    SL++ M++ G  P  + C++LINGL     
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + +A+ F  + V     P++  FN+L++G CR  R  D + +F  +    I PD +T   
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
           L+  +   G +  A LL  + ++ G  P+  T+S ++  +   + +
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 181/399 (45%), Gaps = 58/399 (14%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGK-----TYN--FFRLFRDSL-----------GDF 111
           LIH  +     D A  V   MV  +G      TYN   +  +++ L            + 
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418

Query: 112 GC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           GC      Y+ L++ + ++GKIDE+  +   MS  G  L P+ V    +CL+ +      
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG--LKPNTVG--FNCLISA------ 468

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
              C+  R                   I  A  + R++ ++G  P++ T N ++  LC  
Sbjct: 469 --FCKEHR-------------------IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            +I +A  L   ++  G   N VT++TLINAF +  ++++A +L N M+      D I Y
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LI GL +AG + +   L    L  G     +  + +++     G V  AV+    M+ 
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P++++++ LI GLC+ GR+ +   +F ++    + P  +T+++L+   CK G + D
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFF 441
              L D  I+ G  P+    S+L+  ++     D  RF+
Sbjct: 688 ACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFY 726



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 4/152 (2%)

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           +   L+ G C    A     +F  M    I P + T  V+++   +   + SA+ L   M
Sbjct: 188 VLEILVSGNCHKVAAN----VFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            K G  P+ + Y  +IH L K   ++  L + + M   G  PD   +N ++  L K   +
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + A K+  ++  RG  PD ITY  ++ G C +
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 1/137 (0%)

Query: 472 TVKLFMLM-GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           T +L + M  +Y+ +P   ++ V++  + S      A  +F+ ML R + P + T+  ++
Sbjct: 165 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 224

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
                   I   L + + M ++G  P+  IY  L++ L K   ++ AL+L  ++   G  
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284

Query: 591 PDIITYNTIICGYCSLN 607
           PD  T+N +I G C  +
Sbjct: 285 PDAETFNDVILGLCKFD 301


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 231/517 (44%), Gaps = 56/517 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+  +++  ++     I   M   G   +P L   L+    +       YKL   M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 175 G----KGFCVYEFLMNG------LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                 G+ VY   +        L    +++ A  ++ +++    V N V      + LC
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   A  L   ++  G  P+  T+S +I   C   K+EKAF L+  M  + + PD+ 
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ILID   KAG +++   L       G    VV +++++ AY+    V +A   + RM
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL----------------IRRLEPSL 388
           ++ G  PN ++Y  L+ GLC+ G + +A  ++ +++                   L P++
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT 448
           +TY +L+DG CK+ K+     L D M+  G +P                           
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEP--------------------------- 477

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
              N  +++ L+DG C+  +     ++F+ M      P V T+T LI  +   G L  A+
Sbjct: 478 ---NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 534

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +  QMLK   TP+V+TY+A+I GL +       L +  LME  G +P++  Y  L++ L
Sbjct: 535 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            K   +D +L LF Q++ +G  P+ +TY  +I   C+
Sbjct: 595 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 631



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/542 (23%), Positives = 231/542 (42%), Gaps = 43/542 (7%)

Query: 105 RDSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
            D L DFG       Y+ L++     G++D    +   MS+ G  +    V      L  
Sbjct: 28  EDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCK 87

Query: 160 SNSVGQYYKLCRAMRGKGF------CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
               G++      +  + F      C +  +++GL+     + A     ++     +PN+
Sbjct: 88  E---GRWADALDMIEREDFKLDTVLCTH--MISGLMEASYFDEAMSFLHRMRCNSCIPNV 142

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           VT   +L       Q+G    + ++++  G  PN   F++L++++C E     A++L N 
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 202

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA------LDRGLKLDVVVFSSVMDA 327
           M      P  ++Y+I I  +    +L   + L L        L     L+ V  ++    
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
             G+G   +A Q    M+  GF+P+  +YS +I  LC   ++ +A  LF ++ +  + P 
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFF 442
           + TY+ LID FCK+G +     L++ M   G  P  V  + LI+  +       A   F 
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM-LMGM---------------YNIKP 486
           + V     PN   +  L+DG C+    +   +++  L+G                + + P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +V+T+  L+ G+     +  A  L   ML  G  P+ I Y A+I G  K   I     +F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             M + G  P +  Y  L++ + K+  LD A+K+  Q+      P+++TY  +I G C +
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 607 NS 608
             
Sbjct: 563 GE 564



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 130/549 (23%), Positives = 241/549 (43%), Gaps = 72/549 (13%)

Query: 119 IENYVR----IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           + N+ R    +GK D++ ++   M   G         ++++ L  +  V + + L + M+
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++   + G+IE A  +  ++   G  P +VT   ++       Q+ 
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 375

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM--------------- 275
            A+ +F  ++  G +PN VT+  L++  CK   + KAF++Y  ++               
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 276 -EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
               L P+++ Y  L+DGL KA ++   +ELL   L  G + + +V+ +++D +   G +
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495

Query: 335 GRA---------------VQTY----DRMLNGGFL----------------PNVISYSIL 359
             A               V TY    DRM   G L                PNV++Y+ +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+ G   +A  L   +  +   P+++TY++LIDG  K+GK+     L+  M ++G 
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615

Query: 420 KPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPN-LFIFNTLMDGCCRLKRATDTVK 474
            P+ V   +LIN L      D  R     ++ T  P  L  +   + G    K    ++ 
Sbjct: 616 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG--FSKSFIASLG 673

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK--RGLTPDVITYSAIIHG 532
           +   M  Y   P    + +LI   +  G L  A+ L  +M++    +  D   Y+++I  
Sbjct: 674 ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQA 733

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL-FGQLTDRGLEP 591
           L     +     ++  M R G  P+++++  L+  L++    D AL+L +G   + GL  
Sbjct: 734 LCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGL-- 791

Query: 592 DIITYNTII 600
            +++Y T I
Sbjct: 792 -LLSYTTQI 799



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 94/411 (22%), Positives = 164/411 (39%), Gaps = 70/411 (17%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           +A++    K      A + F     C   P++     LI  + +    D+A  V  +M+ 
Sbjct: 483 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML- 541

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
                       +DS       Y+ +I+   RIG+ ++++++ + M + G   SP++V  
Sbjct: 542 ------------KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC--SPNVV-- 585

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                                       Y  L++GL + G I+ +  +  Q+ ++G  PN
Sbjct: 586 ---------------------------TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPN 618

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF-QLY 271
            VT   ++  LC  G +  A       LL+G          L    C      K+F    
Sbjct: 619 YVTYRVLINHLCAAGLLDKAR------LLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL 672

Query: 272 NLMMEMD---LVPDLIIYSILIDGLFKAGRLKEGNELL--LTALDRGLKLDVVVFSSVMD 326
            ++ EM+    VP   +Y +LID   KAGRL+   EL   +  +   +K D  +++S++ 
Sbjct: 673 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 732

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA-------CGLFGQV 379
           A      V  A + Y  M   GF+P +  +  LIKGL +  +  EA       C   G +
Sbjct: 733 ALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGLL 792

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGK----LRDGFSLYDNMIKRGLKPDAVVC 426
           L    +  L T+  ++ G+ K+ +    L D FS +           AV+C
Sbjct: 793 LSYTTQIFLFTFVVIVVGYGKNIEPQVDLGDSFSSFTVSASASNLKTAVIC 843


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 254/548 (46%), Gaps = 30/548 (5%)

Query: 89  KMVIQFGKTYNFFRLFRDSLG-DFGCD-YS--FLIENYVRIGKIDESVEIFAYMSDMGIY 144
           K++++  +  +  +L+ + LG D G D YS   L+      G+++E +++       G  
Sbjct: 177 KLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCI 236

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHM 200
                   L+        +G+   L   M  KGF      Y  L+N L +KG +E    +
Sbjct: 237 PHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSL 296

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             ++ +RG  PN+   N ++  LC       A  +   +   G  P+++TF+TLI   C 
Sbjct: 297 FLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCH 356

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
           E  + KA       +  +L P+ + Y+ LI G    G L   ++LL+  + RG   DVV 
Sbjct: 357 EGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVT 416

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           F +++   V  G V  A+   ++M      P+V  Y++LI GLC++  L  A  +  ++L
Sbjct: 417 FGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEML 476

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMG 435
            + ++P    Y++LIDGF +S  L D   +++ M  +G++PD V C+ +I      G+M 
Sbjct: 477 EKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMS 536

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +A+       ++  IP+ F + T++ G  +       ++    M     KP+V+T++ LI
Sbjct: 537 EAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 596

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF-KGKNISVGLHMFKLMERNGV 554
            G    G   SA  LF  M    L+P+V+TY+ +I  LF K K +  GL+ F+ M  N  
Sbjct: 597 NGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLY-FETMLLNHC 655

Query: 555 APDIAIYNVLLNMLIK---------ECNL------DAALKLFGQLTDRGLEPDIITYNTI 599
           +P+    + L+N L            CN       DA L +F +L     +P    YN I
Sbjct: 656 SPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAI 715

Query: 600 ICGYCSLN 607
           I   C  N
Sbjct: 716 IFSLCRHN 723



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 203/439 (46%), Gaps = 40/439 (9%)

Query: 206 QRGFVPNIVTCNKILK-----------------------------------RLCINGQIG 230
           Q G +P +  CN++LK                                    LC+ G++ 
Sbjct: 162 QYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVE 221

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               L +     G  P+VV ++ LI+ +C+   + +   L   M     +P L+ Y  LI
Sbjct: 222 EGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLI 281

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + L K G L++   L L    RGL  +V +++SV+DA        +A+    +M   G  
Sbjct: 282 NCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCD 341

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++I+++ LI GLC +G + +A     + + R L P+ L+Y+ LI GFC  G+L     L
Sbjct: 342 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDL 401

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M+ RG  PD V    LI+GL     + +AL    +     + P++ I+N L+ G C+
Sbjct: 402 LMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 461

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                    +   M   N++PD   +  LI G     +L  A  +F  M  +G+ PD+++
Sbjct: 462 KHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVS 521

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            +A+I G  +   +S  +     M + G  PD   Y  +++   K+ NL+ AL+    + 
Sbjct: 522 CNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI 581

Query: 586 DRGLEPDIITYNTIICGYC 604
            R  +P+++TY+++I GYC
Sbjct: 582 KRKCKPNVVTYSSLINGYC 600



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 190/403 (47%), Gaps = 6/403 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLL-LVGPKPNVVTFSTLINAFCKEAKLEK 266
           G  P       ++      G +G A+ + + L    G  P V   + L+    ++ + + 
Sbjct: 128 GAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDD 187

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A +LY+ M+  D   D     +L+ GL   GR++EG +L+      G    VV ++ ++D
Sbjct: 188 ARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLID 247

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y   GD+GR +     M   GFLP +++Y  LI  L ++G L +   LF ++  R L P
Sbjct: 248 GYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSP 307

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFF 441
           ++  Y+S+ID  CK         +   M   G  PD +  + LI GL  +     A  F 
Sbjct: 308 NVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 367

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +++R  L PN   +  L+ G C          L M M      PDV+T   LI G+   
Sbjct: 368 REAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVA 427

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +S A+++  +M +R + PDV  Y+ +I GL K   +    ++ + M    V PD  +Y
Sbjct: 428 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVY 487

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             L++  I+  NL  A K+F  +  +G+ PDI++ N +I GYC
Sbjct: 488 ATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYC 530



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 148/357 (41%), Gaps = 54/357 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  LI   V  GK+ E++ +   M++  ++   ++   L+S L   + +     +   M 
Sbjct: 417 FGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEML 476

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K       VY  L++G +R   + +A  +   +  +G  P+IV+CN ++K  C  G + 
Sbjct: 477 EKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMS 536

Query: 231 NASSLFDVLLLVG--P---------------------------------KPNVVTFSTLI 255
            A      +  VG  P                                 KPNVVT+S+LI
Sbjct: 537 EAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 596

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR-LKEG------------ 302
           N +CK    + A  L+  M    L P+++ Y+ILI  LFK  + L+ G            
Sbjct: 597 NGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCS 656

Query: 303 -NELLLTALDRGL-KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
            N++ L  L  GL      V +S+      +      +  + +++     P   +Y+ +I
Sbjct: 657 PNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAII 716

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
             LC+   L EA     ++  +   P+ +T+ SL+ GFC  GK  +  ++  N  ++
Sbjct: 717 FSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTILPNEFQQ 773


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 208/429 (48%), Gaps = 5/429 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y   +N L+    ++    +H +++  G V ++ T N ++K LC   Q+  A  + + + 
Sbjct: 126 YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMA 185

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G KP+ +TF+TL+  F +E  L  A ++   M+    +   +   +L++G  K GR++
Sbjct: 186 NHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVE 245

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E    +L   + G   D V F+S+++ +  IG+V  A+   D M+  GF P+V +Y+ LI
Sbjct: 246 EALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLI 305

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G+C+ G   +A  +  Q+++R   P+ +TY++LI   CK  ++     L   ++ +GL 
Sbjct: 306 SGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLL 365

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD    + LI GL        A+  F +       P+ F ++ L+D  C  +R  + + L
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML 425

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M       + + +  LI G+     +  A  +F QM   G++   +TY+ +I GL K
Sbjct: 426 LKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK 485

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            K +     +   M   G+ PD   YN LL    +  +++ A  +   +   G EPDI T
Sbjct: 486 NKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFT 545

Query: 596 YNTIICGYC 604
           Y T+I G C
Sbjct: 546 YGTLIGGLC 554



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 230/456 (50%), Gaps = 16/456 (3%)

Query: 160 SNSVGQYYKLC---RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
           SNS  ++  LC    +         E L+  L +    ++   + +Q+   G +PN  T 
Sbjct: 34  SNSTFKFPTLCTTPSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTF 93

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
             +++      +I N   + +  L  G KP+   ++  +NA  ++ KL+    L++ M+ 
Sbjct: 94  ATLIQSFTNFHEIENLLKILENEL--GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVN 151

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             +V D+  +++LI  L KA +L+    +L    + GLK D + F+++M  ++  GD+  
Sbjct: 152 EGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNG 211

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A++   +ML  G L   +S  +L+ G C++GR+ EA     +V      P  +T++SL++
Sbjct: 212 ALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVN 271

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIP 451
           GFC+ G + D   + D MI++G  PD    + LI+G+  +G+   A+    Q +     P
Sbjct: 272 GFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSP 331

Query: 452 NLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           N   +NTL+   C+   ++ ATD  ++ +  G+    PDV T   LI+G+    +   A+
Sbjct: 332 NTVTYNTLISALCKENEIEAATDLARILVSKGLL---PDVCTFNTLIQGLCLSKNQDIAM 388

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +F +M  +G  PD  TYS +I  L   + +   L + K ME +G A +  +YN L++ L
Sbjct: 389 EMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGL 448

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            K   ++ A ++F Q+   G+    +TYNT+I G C
Sbjct: 449 CKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLC 484



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 230/498 (46%), Gaps = 40/498 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           ++ LI+   +  ++  ++ +   M++ G  L PD +    LM   ++   +    K+ + 
Sbjct: 161 FNVLIKALCKAHQLRPAILMLEEMANHG--LKPDEITFTTLMQGFIEEGDLNGALKMKKQ 218

Query: 173 MRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           M G G C+      + L+NG  ++G +E A     +V + GF P+ VT N ++   C  G
Sbjct: 219 MLGYG-CLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIG 277

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            + +A  + D ++  G  P+V T+++LI+  CK  + EKA ++   M+  +  P+ + Y+
Sbjct: 278 NVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYN 337

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI  L K   ++   +L    + +GL  DV  F++++       +   A++ ++ M N 
Sbjct: 338 TLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNK 397

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+  +YSILI  LC + RL EA  L  ++       + + Y++LIDG CKS ++ D 
Sbjct: 398 GCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDA 457

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             ++D M   G+   +V                               +NTL+DG C+ K
Sbjct: 458 EEIFDQMELLGVSRSSVT------------------------------YNTLIDGLCKNK 487

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  +  +L   M M  +KPD  T+  L+      G +  A  +   M   G  PD+ TY 
Sbjct: 488 RVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYG 547

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I GL +   + V   + + ++  G+      YN ++  L         ++LF ++ ++
Sbjct: 548 TLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEK 607

Query: 588 GLEPDIITYNTIICGYCS 605
              PD +T+  +  G C+
Sbjct: 608 SDPPDALTHKIVFRGLCN 625



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 218/461 (47%), Gaps = 24/461 (5%)

Query: 92  IQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLS 146
           I+ G      ++ +  LG +GC         L+  + + G+++E++     +S+ G   S
Sbjct: 204 IEEGDLNGALKMKKQMLG-YGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEG--FS 260

Query: 147 PDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHM 200
           PD V    L++      +V     +   M  KGF      Y  L++G+ + G  E A  +
Sbjct: 261 PDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEI 320

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
            +Q+I R   PN VT N ++  LC   +I  A+ L  +L+  G  P+V TF+TLI   C 
Sbjct: 321 LQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCL 380

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
               + A +++  M      PD   YSILID L    RLKE   LL      G   + VV
Sbjct: 381 SKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVV 440

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           +++++D       +  A + +D+M   G   + ++Y+ LI GLC+  R+ EA  L  Q++
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 500

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----D 436
           +  L+P   TY+SL+  FC+ G +     +   M   G +PD      LI GL      D
Sbjct: 501 MEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVD 560

Query: 437 ALRFFFQSVRM---TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
                 +SV+M    L P+   +N ++      KR  + ++LF  M   +  PD +TH +
Sbjct: 561 VASKLLRSVQMKGIVLTPH--AYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKI 618

Query: 494 LIRGIAS-QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           + RG+ +  G +  AI    +ML++G+ P+  ++  +  GL
Sbjct: 619 VFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGL 659



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 187/396 (47%), Gaps = 18/396 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI    ++G+ ++++EI   M  +    SP+ V    L+S L   N +     L R 
Sbjct: 301 YNSLISGMCKLGEFEKAIEILQQM--ILRECSPNTVTYNTLISALCKENEIEAATDLARI 358

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  KG     C +  L+ GL      + A  M  ++  +G  P+  T + ++  LC   +
Sbjct: 359 LVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERR 418

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L   +   G   N V ++TLI+  CK  ++E A ++++ M  + +    + Y+ 
Sbjct: 419 LKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNT 478

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDGL K  R++E ++L+   +  GLK D   ++S++  +  +GD+ +A      M + G
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 538

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++ +Y  LI GLC+ GR+  A  L   V ++ +  +   Y+ +I       + ++G 
Sbjct: 539 CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGM 598

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL------MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            L+  M+++   PDA+   ++  GL      + +A+ F  + +   ++P    F  L +G
Sbjct: 599 RLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEG 658

Query: 463 CCRLKRATDTVKLF-MLMGMYNIKPDVITHTVLIRG 497
            C L      ++L  M+M    +       T +IRG
Sbjct: 659 LCSLSMEDTLIELINMVMEKAQMSE---RETSMIRG 691



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 133/292 (45%), Gaps = 32/292 (10%)

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +   F++++ ++    ++   ++  +  L  GF P+   Y+I +  L +  +L     L 
Sbjct: 89  NATTFATLIQSFTNFHEIENLLKILENEL--GFKPDTNFYNIALNALVEDNKLKLVEMLH 146

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
            +++   +   + T++ LI   CK+ +LR    + + M   GLKPD +  + L+ G    
Sbjct: 147 SKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQG---- 202

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
                            FI    ++G  ++K+         ++G Y      ++  VL+ 
Sbjct: 203 -----------------FIEEGDLNGALKMKK--------QMLG-YGCLLTNVSVKVLVN 236

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G   +G +  A+    ++ + G +PD +T++++++G  +  N++  L +   M   G  P
Sbjct: 237 GFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDP 296

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           D+  YN L++ + K    + A+++  Q+  R   P+ +TYNT+I   C  N 
Sbjct: 297 DVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 109/226 (48%), Gaps = 7/226 (3%)

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRF 440
           P+  T+++LI  F    ++ +   + +N +  G KPD    ++ +N L+ D         
Sbjct: 88  PNATTFATLIQSFTNFHEIENLLKILENEL--GFKPDTNFYNIALNALVEDNKLKLVEML 145

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             + V   ++ ++  FN L+   C+  +    + +   M  + +KPD IT T L++G   
Sbjct: 146 HSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIE 205

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           +G L+ A+ +  QML  G     ++   +++G  K   +   L     +   G +PD   
Sbjct: 206 EGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVT 265

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +N L+N   +  N++ AL +   + ++G +PD+ TYN++I G C L
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKL 311


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 230/490 (46%), Gaps = 39/490 (7%)

Query: 122  YVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF--- 178
            +  IGK+ E+V++   M + G+ L+  ++ R++    +   V     +   M  +G    
Sbjct: 771  FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 830

Query: 179  -CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
             C Y++++ G  R G +  A     ++++RGFV +  T   I+   C    +  A   F 
Sbjct: 831  SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890

Query: 238  VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
             +  +G  PN++ +S++I+  CK   +++AF+L   M++    P++  ++ LI GL K G
Sbjct: 891  KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 950

Query: 298  RLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
              +    L L  +     K +V  +++++  Y     + RA   ++RM   G +PN  +Y
Sbjct: 951  WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 1010

Query: 357  SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
            + LI G C+ G   +A  L   +      P+  TY+S++DG CK G+  + F L +   +
Sbjct: 1011 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQ 1070

Query: 417  RGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
              ++ D V  ++LI+                                 + KRA     L 
Sbjct: 1071 NQIEADGVTYTILISE--------------------------------QCKRADMNQALV 1098

Query: 477  MLMGMYNI--KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
             L  M+ +  +PD+  +T LI     Q  +  +  LF +++K GL P   TY+++I G  
Sbjct: 1099 FLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYC 1158

Query: 535  KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
            + K +S+ +  F+ M  +G APD   Y  L++ L KE  LD A +L+  + D+GL P  +
Sbjct: 1159 REKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEV 1218

Query: 595  TYNTIICGYC 604
            T  T+   YC
Sbjct: 1219 TRVTLTYEYC 1228



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 248/534 (46%), Gaps = 61/534 (11%)

Query: 73   VLLQSDMR--DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDE 130
            +L+ ++MR  + A +VFD+M  +         ++ DS     C Y ++I  Y R G + E
Sbjct: 803  ILVAAEMRLVEYAGNVFDEMSAR--------GVYPDS-----CTYKYIIVGYCRNGNVLE 849

Query: 131  SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YYKLCRAMRGKGFCVYEFLMN 186
            +      M + G  +    +  +++   + + V +    ++K+ +         Y  +++
Sbjct: 850  ADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMIS 909

Query: 187  GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-K 245
            GL ++G ++ AF +  ++++ G+ PN+ T   ++  LC  G    A  LF  L+     K
Sbjct: 910  GLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYK 969

Query: 246  PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
            PNV T++ +I+ +CKE KL +A  L+  M E  LVP+   Y+ LIDG  KAG   +  EL
Sbjct: 970  PNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYEL 1029

Query: 306  LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV----ISYSILIK 361
            +    + G   +   ++S++D   G+   GRA + + ++LN GF   +    ++Y+ILI 
Sbjct: 1030 MELMSNEGFFPNTCTYNSIVD---GLCKRGRAEEAF-KLLNTGFQNQIEADGVTYTILIS 1085

Query: 362  GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
              C++  + +A     ++     +P +  Y++LI  FC+   ++D   L+D +IK GL P
Sbjct: 1086 EQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAP 1145

Query: 422  DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
                                              + +++ G CR K+ +  VK F  M  
Sbjct: 1146 TKET------------------------------YTSMICGYCREKKVSLAVKFFQKMSD 1175

Query: 482  YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
            +   PD I++  LI G+  +  L  A  L+  M+ +GL+P  +T   + +   K ++ + 
Sbjct: 1176 HGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFAS 1235

Query: 542  GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
             +    ++ER      I   + L+  L  E  +  A   F +L D+ +  D +T
Sbjct: 1236 AM---VILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVT 1286



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 205/425 (48%), Gaps = 17/425 (4%)

Query: 116  SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAM 173
            + +I  +     ++ +V  F  ++ MG  LSP+L+    ++S L    SV Q ++L   M
Sbjct: 870  TLIITAFCEKSLVNRAVWFFHKVTKMG--LSPNLINYSSMISGLCKRGSVKQAFELLEEM 927

Query: 174  RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQ 228
               G+      +  L++GL +KG  E AF +  ++I+   + PN+ T   ++   C   +
Sbjct: 928  VKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 987

Query: 229  IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            +  A  LF+ +   G  PN  T++TLI+  CK     KA++L  LM      P+   Y+ 
Sbjct: 988  LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNS 1047

Query: 289  LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            ++DGL K GR +E  +LL T     ++ D V ++ ++       D+ +A+   ++M   G
Sbjct: 1048 IVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVG 1107

Query: 349  FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            F P++  Y+ LI   C+Q  + ++  LF +V+   L P+  TY+S+I G+C+  K+    
Sbjct: 1108 FQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAV 1167

Query: 409  SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
              +  M   G  PD++    LI+GL     + +A + +   +   L P      TL    
Sbjct: 1168 KFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEY 1227

Query: 464  CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            C+ +   D     +++   N K  + T   LIR +  +  ++ A L F ++L + +  D 
Sbjct: 1228 CKTE---DFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDR 1284

Query: 524  ITYSA 528
            +T +A
Sbjct: 1285 VTLAA 1289



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 142/302 (47%), Gaps = 6/302 (1%)

Query: 312  RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            RG+  D   +  ++  Y   G+V  A +    M+  GF+ +  + +++I   C++  +  
Sbjct: 825  RGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNR 884

Query: 372  ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
            A   F +V    L P+L+ YSS+I G CK G ++  F L + M+K G KP+    + LI+
Sbjct: 885  AVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIH 944

Query: 432  GL-----MGDALRFFFQSVRM-TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
            GL        A R F + +R     PN+  +  ++ G C+ ++ +    LF  M    + 
Sbjct: 945  GLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLV 1004

Query: 486  PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
            P+  T+T LI G    G+ S A  L   M   G  P+  TY++I+ GL K         +
Sbjct: 1005 PNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKL 1064

Query: 546  FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
                 +N +  D   Y +L++   K  +++ AL    ++   G +PDI  Y T+I  +C 
Sbjct: 1065 LNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCR 1124

Query: 606  LN 607
             N
Sbjct: 1125 QN 1126



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 23/194 (11%)

Query: 437 ALRFFFQSV---RMTLIPNLFIFNTL-MDGCCRLKRATDTVK----LFMLMGMYNIKPD- 487
           AL FF+ +V   +      L+I  T+ + G C L+RA + V+    +F  +G      D 
Sbjct: 724 ALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDM 783

Query: 488 ---------VITHTVLIRGI---ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
                    V+T  V+ R I   A    +  A  +F +M  RG+ PD  TY  II G  +
Sbjct: 784 ILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCR 843

Query: 536 GKNI-SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
             N+      + ++MER G   D A   +++    ++  ++ A+  F ++T  GL P++I
Sbjct: 844 NGNVLEADRWICEMMER-GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLI 902

Query: 595 TYNTIICGYCSLNS 608
            Y+++I G C   S
Sbjct: 903 NYSSMISGLCKRGS 916


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 203/410 (49%), Gaps = 11/410 (2%)

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           +++ LC+ G +     L +     G  PN V ++ LI+ +C+   + +   L   M    
Sbjct: 265 MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKG 324

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           L+P ++ Y  L+  L + G L++   LL    +R L  +V +++SV+DA        +A+
Sbjct: 325 LLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQAL 384

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
               +M  GG  P+ I++S LI GLCQ+GR+ EA  L  +     L P+L +Y+SLI GF
Sbjct: 385 VVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGF 444

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           C  G++    +L   M++RG  PD V    LI+GL     + +AL    +     L+P+ 
Sbjct: 445 CVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDA 504

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
            I+N L+ G C+ K       L   M   N+ PD   +T LI G     SL  A  +F  
Sbjct: 505 NIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEF 564

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M ++G+ PDV+ Y+A+I G  +   ++  +     M + G  PD   Y  L+    K+ N
Sbjct: 565 MEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN-----SCLIDGYFKSQ 618
           +  AL L   +  R  +P+++ Y+++I GYC L       CL  G  +SQ
Sbjct: 625 ISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLF-GSMESQ 673



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 205/422 (48%), Gaps = 5/422 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++ GL  +G++E    +       G VPN V  N ++   C  G +G    L   +   G
Sbjct: 265 MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKG 324

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P VVT+ TL++   ++  LEK   L + M E  L P++ IY+ +ID L K     +  
Sbjct: 325 LLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQAL 384

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +L      G   D + FS+++      G V  A +           PN+ SY+ LI G 
Sbjct: 385 VVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGF 444

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C +G ++ A  L  +++ R   P ++T+ +LI G   +G++ +   + + M  R L PDA
Sbjct: 445 CVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDA 504

Query: 424 VVCSLLINGL----MGDALRFFFQS-VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            + ++LI+GL    M  A R   +  +   + P+ +++ TL+DG  R +   +  K+F  
Sbjct: 505 NIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEF 564

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    I PDV+ +  +I+G    G ++ A+     M K G  PD  TY+ +I G  K  N
Sbjct: 565 MEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           IS  L +   M +    P++  Y+ L+N   K  + DAA  LFG +  +GL P++ITY  
Sbjct: 625 ISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTI 684

Query: 599 II 600
           +I
Sbjct: 685 LI 686



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 215/461 (46%), Gaps = 34/461 (7%)

Query: 163 VGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           VG+   L   M  KG       Y  LM+ L RKG +E    +  ++ +R   PN+   N 
Sbjct: 310 VGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNS 369

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++  LC       A  +   +   G  P+ +TFSTLI+  C+E ++++A +L       +
Sbjct: 370 VIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWE 429

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           L P+L  Y+ LI G    G +   + LL+  ++RG   DVV F +++   V  G V  A+
Sbjct: 430 LNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEAL 489

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
              ++M     LP+   Y++LI GLC++  L  A  L  ++L + + P    Y++LIDGF
Sbjct: 490 LVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGF 549

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNT 458
            ++  L +   +++ M ++G+ PD V                               +N 
Sbjct: 550 IRNESLDEARKIFEFMEQKGIHPDVVG------------------------------YNA 579

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C+     + V+    M      PD  T+T LI G A QG++S A+ L   M+KR 
Sbjct: 580 MIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRR 639

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             P+V+ YS++I+G  K  +      +F  ME  G+ P++  Y +L+  L K+  +  A 
Sbjct: 640 CQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAA 699

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
             F  +      P+  T ++++ G C+  + +I  +  S +
Sbjct: 700 MYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTV 740



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 171/345 (49%), Gaps = 5/345 (1%)

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           + A +LY+ M+  +   D     +++ GL   G +++G +L+      G   + V ++ +
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D Y   GDVGR +     M   G LP V++Y  L+  L ++G L +   L  ++  RRL
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
            P++  Y+S+ID  CK         +   M   G  PDA+  S LI+GL     + +A R
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              ++ R  L PNL  + +L+ G C          L + M      PDV+T   LI G+ 
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G +S A+L+  +M  R L PD   Y+ +I GL K K +    ++ + M    V PD  
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +Y  L++  I+  +LD A K+F  +  +G+ PD++ YN +I GYC
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYC 585



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 46/318 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ ++R   +DE+ +IF +M   GI+  PD+V                        
Sbjct: 542 YTTLIDGFIRNESLDEARKIFEFMEQKGIH--PDVVG----------------------- 576

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++ G  + G++  A      + + G +P+  T   ++      G I  A S
Sbjct: 577 ------YNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALS 630

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   ++    +PNVV +S+LIN +CK    + A  L+  M    L P++I Y+ILI  LF
Sbjct: 631 LLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLF 690

Query: 295 KAGRLKEG--------------NELLLTALDRGLKLDVV-VFSSVMDAYVGIGDVGRAVQ 339
           K  ++                 N+  L +L  GL   +  + SS   + V +   G  + 
Sbjct: 691 KKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLD 750

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            +  ++N    P   +Y+ +I  LC    L EA  L  ++  +  +P   T+ SL+ GFC
Sbjct: 751 IFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFC 810

Query: 400 KSGKLRDGFSLYDNMIKR 417
             GK R+  ++  N  +R
Sbjct: 811 SVGKSREWRTILPNEFQR 828



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 65/138 (47%)

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D  KL+  M       D  +  V++RG+  +G +   + L       G  P+ + Y+ +I
Sbjct: 242 DARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLI 301

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G  +  ++  G+ +   ME  G+ P +  Y  L++ L ++ +L+    L  ++ +R L 
Sbjct: 302 DGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLP 361

Query: 591 PDIITYNTIICGYCSLNS 608
           P++  YN++I   C   S
Sbjct: 362 PNVQIYNSVIDALCKCRS 379


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 206/399 (51%), Gaps = 5/399 (1%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+ V+ N IL  LC  G++  A  L   +   G  PN  TF+ L++ +CK   L++A Q+
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQV 304

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
            +LM + +++PD+  Y++LI GL K G++ E   L     +  L  DVV ++++++    
Sbjct: 305 IDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFD 364

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
                +  +  D+M   G  PN ++Y++++K   ++G++  A     ++      P  +T
Sbjct: 365 CSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVT 424

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSV 445
           +++LI+G+CK+G+L + F + D M ++GLK ++V  + +++ L G     DA +    + 
Sbjct: 425 FNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 484

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +     +   + TL+ G  +  ++ + +KL+  M    I P +IT+  +I G+   G   
Sbjct: 485 KRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTD 544

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            +I    ++L+ GL PD  TY+ II G  +   +         M +    PD+   N+LL
Sbjct: 545 QSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL 604

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             L  E  LD ALKLF     +G   D +TYNTII G C
Sbjct: 605 RGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLC 643



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 210/425 (49%), Gaps = 5/425 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  +++ L +KG +  A  +   +   G +PN  T N ++   C  G +  A+ + D++ 
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                P+V T++ LI   CK+ K+++AF+L + M  + L+PD++ Y+ LI+G F      
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL 369

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +G EL+     +G+K + V ++ V+  YV  G +  A     +M   GF P+ ++++ LI
Sbjct: 370 KGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLI 429

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ GRL EA  +  ++  + L+ + +T ++++   C   KL D + L  +  KRG  
Sbjct: 430 NGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF 489

Query: 421 PDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            D V    LI G   D     A++ + +     +IP++  +NT++ G C   +   ++  
Sbjct: 490 VDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDK 549

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              +    + PD  T+  +I G   +G +  A     +M+K+   PD+ T + ++ GL  
Sbjct: 550 LNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCT 609

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +   L +F      G A D   YN +++ L KE   + A  L  ++ ++ L PD  T
Sbjct: 610 EGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYT 669

Query: 596 YNTII 600
           YN I+
Sbjct: 670 YNAIL 674



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 204/421 (48%), Gaps = 12/421 (2%)

Query: 196 NAFHMHRQVIQR----GFVPNIVTCNKILK---RLCINGQIGNASSLFDVLLLVGPKPNV 248
           N  H   Q+  R       PN++TCN ++    R      +  + ++F  ++ +G K N 
Sbjct: 153 NRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNT 212

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
            TF+ LI   C E KL +A  L   M +    PD + Y+ ++D L K G+L E  +LLL 
Sbjct: 213 NTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLD 272

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
             + GL  +   F+ ++  Y  +G +  A Q  D M     LP+V +Y++LI GLC+ G+
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           + EA  L  ++   +L P ++TY++LI+G         GF L D M  +G+KP+AV  ++
Sbjct: 333 IDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNV 392

Query: 429 LI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           ++      G M +A     +       P+   FNTL++G C+  R ++  ++   M    
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           +K + +T   ++  +  +  L  A  L     KRG   D ++Y  +I G FK       +
Sbjct: 453 LKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAM 512

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            ++  M+   + P I  YN ++  L      D ++    +L + GL PD  TYNTII GY
Sbjct: 513 KLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGY 572

Query: 604 C 604
           C
Sbjct: 573 C 573



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/488 (22%), Positives = 218/488 (44%), Gaps = 32/488 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L+  Y ++G + E+ ++   M+   +         L+  L     + + ++L   M 
Sbjct: 285 FNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEME 344

Query: 175 G----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L+NG          F +  ++  +G  PN VT N ++K     G++ 
Sbjct: 345 NLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMD 404

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA +    +   G  P+ VTF+TLIN +CK  +L +AF++ + M    L  + +  + ++
Sbjct: 405 NAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 464

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L    +L +  +LL +A  RG  +D V + +++  Y   G    A++ +D M     +
Sbjct: 465 HTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEII 524

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++I+Y+ +I GLC  G+  ++     ++L   L P   TY+++I G+C+ G++   F  
Sbjct: 525 PSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQF 584

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++ M+K+  KPD   C++L+ GL     +  AL+ F   +      +   +NT++ G C+
Sbjct: 585 HNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCK 644

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG------- 518
             R  +   L   M    + PD  T+  ++  +A  G +  A     +++++G       
Sbjct: 645 EDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTI 704

Query: 519 ----------------LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
                             P+ +T+S  I+ L         +HM +   + G+    + Y 
Sbjct: 705 SLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYI 764

Query: 563 VLLNMLIK 570
            L+  LIK
Sbjct: 765 SLMEGLIK 772



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 174/363 (47%), Gaps = 8/363 (2%)

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE---GNEL 305
           V   T I A+    +   A Q++N M  + L P+L+  + LI+ L +            +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
               +  G+K++   F+ ++        +  A+    +M +    P+ +SY+ ++  LC+
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G+L EA  L   +    L P+  T++ L+ G+CK G L++   + D M +  + PD   
Sbjct: 260 KGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWT 319

Query: 426 CSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            ++LI GL  D     A R   +   + L+P++  +NTL++GC     +    +L   M 
Sbjct: 320 YNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKME 379

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              +KP+ +T+ V+++    +G + +A     +M + G +PD +T++ +I+G  K   +S
Sbjct: 380 GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLS 439

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               M   M R G+  +    N +L+ L  E  LD A KL    + RG   D ++Y T+I
Sbjct: 440 EAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLI 499

Query: 601 CGY 603
            GY
Sbjct: 500 MGY 502


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 200/383 (52%), Gaps = 8/383 (2%)

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
           LR   IE ++ ++ +V+  G+ P I   N ++   C  G +GNA  +FD +   G +P V
Sbjct: 224 LRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTV 283

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           V+F+TLI+  CK   +E+ F+L  +M    + PD+  +S LI+GL K GRL EG+ L   
Sbjct: 284 VSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDE 343

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
              RGL  + V F++++D     G V  A++ +  ML  G  P++++Y+ LI GLC+ G 
Sbjct: 344 MCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 403

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           L EA  L  ++    L+P  +T+++LIDG CK G +     +   M++ G++ D V  + 
Sbjct: 404 LKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTA 463

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LI+GL     + DA R     +     P+   +  ++D  C+        KL   M    
Sbjct: 464 LISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDG 523

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
             P V+T+  L+ G+  QG + +A +L   ML  G+ P+ ITY+ ++ G  K  + SV +
Sbjct: 524 HVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGS-SVDV 582

Query: 544 HMFKLMERNGVAPDIAIYNVLLN 566
            +F      G+  D A Y  L+N
Sbjct: 583 DIFN--SEKGLVTDYASYTALVN 603



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 203/419 (48%), Gaps = 22/419 (5%)

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           +  GF P+ V C +++ +      I    +L   ++ + P                  ++
Sbjct: 187 VDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRP-----------------VEI 229

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E+++ LY  +++    P +  +++L+ G  KAG +     +      RGL+  VV F+++
Sbjct: 230 ERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTL 289

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +      GDV    +    M + G  P+V ++S LI GLC++GRL E   LF ++  R L
Sbjct: 290 ISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGL 349

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
            P+ +T+++LIDG CK GK+      +  M+ +G++PD V  + LINGL     + +A R
Sbjct: 350 VPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARR 409

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              +     L P+   F TL+DGCC+       +++   M    I+ D +  T LI G+ 
Sbjct: 410 LVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLC 469

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G +  A  +   ML  G  PD  TY+ +I    K  ++ +G  + K M+ +G  P + 
Sbjct: 470 REGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVV 529

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
            YN L+N L K+  +  A  L   + + G+ P+ ITYN ++ G+    S +    F S+
Sbjct: 530 TYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSE 588



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 152/328 (46%), Gaps = 42/328 (12%)

Query: 319 VVFSSVMDAYVGIGDVGRAVQT-------------------------------------Y 341
           +VF +++ AYV  G    AVQ                                      Y
Sbjct: 177 LVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALY 236

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             +L+ G+ P +  +++L+ G C+ G +  A  +F ++  R L P+++++++LI G CKS
Sbjct: 237 LEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKS 296

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G + +GF L   M   G+ PD    S LINGL     + +    F +     L+PN   F
Sbjct: 297 GDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTF 356

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  +    +K F +M    ++PD++T+  LI G+   G L  A  L  +M  
Sbjct: 357 TTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTA 416

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            GL PD IT++ +I G  K  ++   L + + M   G+  D   +  L++ L +E  +  
Sbjct: 417 SGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHD 476

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A ++   +   G +PD  TY  +I  +C
Sbjct: 477 AGRMLTDMLSAGFKPDDPTYTMVIDCFC 504


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 237/501 (47%), Gaps = 24/501 (4%)

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK----G 177
           YV  G+  ++ +IF  M  +G+  +      L++ LV   S     +L +A+       G
Sbjct: 134 YVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPS-SHSIRLSKAVFTDFIKIG 192

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQR----GFVPNIVTCNKILKRLCINGQIGNAS 233
             +     N L+    +EN F    +V+ +    G  P+ +T N IL  LC  G++  A 
Sbjct: 193 VKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEAR 252

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L   +   G  PN  TF+ L+   C+   L++A  +  LM +  +VPD   Y+++I G 
Sbjct: 253 DLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGF 312

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K GR+ E   L     +  L  DVV ++++++     G      +  + M   G  PN 
Sbjct: 313 CKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNS 372

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGF 408
           ++Y++++K   ++G++ E         +R++E     P ++TY++LI   CK GK+ + F
Sbjct: 373 VTYNVMVKWFVKKGKMDEV-----DKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAF 427

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L D M ++GLK D V  + ++  L     + +A      + R     +   + TL+ G 
Sbjct: 428 RLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGY 487

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            + ++A+  ++L+  M    I P +IT+  +I G+   G  + AI    ++L+ GL PD 
Sbjct: 488 FKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDE 547

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           ITY+ IIHG  +   +         M      PD+   N LL  L KE  L+ ALKLF  
Sbjct: 548 ITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNT 607

Query: 584 LTDRGLEPDIITYNTIICGYC 604
              +G + D ++YNTII   C
Sbjct: 608 WISKGKDVDAVSYNTIILSLC 628



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 225/458 (49%), Gaps = 13/458 (2%)

Query: 155 SCLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           SC+   N  G+  ++   MR  G C      Y  +++GL +KG +  A  +   +  +G 
Sbjct: 207 SCM--ENRFGEAIRVLGKMRDYG-CPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGL 263

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PN  T N ++   C  G +  A+++ +++      P+  T++ +I+ FCK+ ++ +A +
Sbjct: 264 FPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMR 323

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L   M  + L PD++ Y+ LI+G F+ G  +EG +L+     RG+K + V ++ ++  +V
Sbjct: 324 LREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFV 383

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G +    +T  +M   G LP++++Y+ LI   C+ G++ EA  L  ++  + L+   +
Sbjct: 384 KKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDV 443

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQS 444
           T ++++   C+  KL +   L  +  +RG   D V    LI G         ALR + + 
Sbjct: 444 TLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEM 503

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
               +IP++  +N+++ G C++ +    +     +    + PD IT+  +I G   +G +
Sbjct: 504 KEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQV 563

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A     +M+++   PDV+T + ++ GL K   +   L +F      G   D   YN +
Sbjct: 564 EKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTI 623

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +  L KE     A  L  ++ ++ L PD  TYN I+ G
Sbjct: 624 ILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGG 661



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 195/413 (47%), Gaps = 9/413 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L+    R+G + E+  +   MS   +         ++S       + +  +L   M 
Sbjct: 270 FNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEME 329

Query: 175 ----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L+NG    G  E  F +  ++  RG  PN VT N ++K     G++ 
Sbjct: 330 NLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMD 389

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
                   +   G  P++VT++TLI+  CK  K+++AF+L + M    L  D +  + ++
Sbjct: 390 EVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTML 449

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L +  +L E ++LL +A  RG  +D V + +++  Y       +A++ +D M     +
Sbjct: 450 RALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEII 509

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++I+Y+ +I GLCQ G+  +A     ++L   L P  +TY+++I G+C+ G++   F  
Sbjct: 510 PSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQF 569

Query: 411 YDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++ M+++  KPD V C+ L+      G++  AL+ F   +      +   +NT++   C+
Sbjct: 570 HNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCK 629

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
            KR  +   L   M    + PD  T+  ++ G+   G +  A     ++ ++G
Sbjct: 630 EKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 157/352 (44%), Gaps = 62/352 (17%)

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I A+    +  +A Q++N M  + + P L+  + L++ L +                  +
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRF------------PSSHSI 178

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
           +L   VF+  +   V I                    N  S++ILI G C + R  EA  
Sbjct: 179 RLSKAVFTDFIKIGVKI--------------------NTNSFNILIHGSCMENRFGEAIR 218

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
           + G++      P  +TY++++DG CK G+L +   L  +M  +GL               
Sbjct: 219 VLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGL--------------- 263

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
                           PN   FN L+ GCCRL    +   +  LM   ++ PD  T+ V+
Sbjct: 264 ---------------FPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVM 308

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G   QG ++ A+ L  +M    L+PDV+TY+ +I+G F+  +   G  + + ME  G+
Sbjct: 309 ISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGM 368

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            P+   YNV++   +K+  +D   K   ++ + G  PDI+TYNT+I  +C +
Sbjct: 369 KPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKV 420



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 176/390 (45%), Gaps = 12/390 (3%)

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK-----EAKLEKAFQLYNLMMEMDLVP 281
           G+   A+ +F+ +  +G +P ++T +TL+NA  +       +L KA  ++   +++ +  
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKA--VFTDFIKIGVKI 195

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +   ++ILI G     R  E   +L    D G   D + +++++D     G +  A    
Sbjct: 196 NTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLL 255

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             M N G  PN  +++IL+ G C+ G L EA  +   +    + P   TY+ +I GFCK 
Sbjct: 256 LDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQ 315

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIF 456
           G++ +   L + M    L PD V  + LING        +  +   +     + PN   +
Sbjct: 316 GRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTY 375

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N ++    +  +  +  K    M      PD++T+  LI      G +  A  L  +M +
Sbjct: 376 NVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGR 435

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL  D +T + ++  L + + +     +     R G   D   Y  L+    K      
Sbjct: 436 KGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQ 495

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           AL+L+ ++ ++ + P IITYN++I G C +
Sbjct: 496 ALRLWDEMKEKEIIPSIITYNSMIAGLCQM 525



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 156/354 (44%), Gaps = 68/354 (19%)

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFA 136
           V  +V  K  ++ GK     +  R  + + GC      Y+ LI  + ++GK+DE+  +  
Sbjct: 373 VTYNVMVKWFVKKGKMDEVDKTVR-KMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMD 431

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKG 192
            M   G+ +    +  ++  L     + + + L  + R +G+ V    Y  L+ G  +  
Sbjct: 432 EMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHE 491

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
               A  +  ++ ++  +P+I+T N ++  LC  G+   A    D LL  G  P+ +T++
Sbjct: 492 KASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYN 551

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           T+I+ +C+E ++EKAFQ +N M+E +  PD++  + L+ GL K G L++  +L  T + +
Sbjct: 552 TIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISK 611

Query: 313 GLKLDVVVFSSVM--------------------------DAYV------GIGDVGR---A 337
           G  +D V +++++                          D Y       G+ D GR   A
Sbjct: 612 GKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDA 671

Query: 338 VQTYDRMLNGG-----FL------------------PNVISYSILIKGLCQQGR 368
            +   ++   G     FL                  PN I+YS  I  LC QGR
Sbjct: 672 EEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQGR 725


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 221/456 (48%), Gaps = 12/456 (2%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVY-- 181
           R GK   S    + +   G  +   LV  LM   +D   +    +  R  R   F V   
Sbjct: 147 RKGKNSASSVFISLVEMRGTPMCDFLVDALMITYMDLGFIPDVIQCFRLSRKHNFVVPIR 206

Query: 182 --EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
               L++ +++       +  + +++  GF  N+   N ++ + C  G I +A  +FD +
Sbjct: 207 GCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEI 266

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                +P VV+F+TLIN +CK   L+  F+L + M +    PD+  YS LI+ L K  ++
Sbjct: 267 TKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKM 326

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
              + L     +RGL  + V+F++++  +   G +    ++Y +ML+ G  P+++ Y+ L
Sbjct: 327 DGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTL 386

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G C+ G LV A  +   ++ R L P  +TY++LIDGFC+ G +     +   M + G+
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGI 446

Query: 420 KPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + D     A++C +   G + DA R   + +R  + P+   +  +MD  C+   A    K
Sbjct: 447 ELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFK 506

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M      P+V+T+ VL+ G+   G + +A +L   ML  G+ PD ITY+ ++ G  
Sbjct: 507 LLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHH 566

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           +  N S     +K     G+  D+A Y  L+N L +
Sbjct: 567 RHANAS---KHYKQKPEIGIVADLASYKSLVNELYR 599



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 208/447 (46%), Gaps = 36/447 (8%)

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRK----GVIENAFHMHRQVIQRGFVPNIVTC 216
           NS    +     MRG   C  +FL++ L+      G I +     R   +  FV  I  C
Sbjct: 151 NSASSVFISLVEMRGTPMC--DFLVDALMITYMDLGFIPDVIQCFRLSRKHNFVVPIRGC 208

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
             +L R+      G     +  +L  G   NV  F+ L+N FCKE  +  A ++++ + +
Sbjct: 209 GNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITK 268

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             L P ++ ++ LI+G  K G L  G  L         + DV  +S++++A      +  
Sbjct: 269 RSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDG 328

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A + +  M   G +PN + ++ LI G  + G++      + ++L + L+P ++ Y++L++
Sbjct: 329 AHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVN 388

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIF 456
           GFCK+G L    ++ D MI+RGL+PD V                               +
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKVT------------------------------Y 418

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG CR       +++   M    I+ D +  + LI G+  +G +  A     +ML+
Sbjct: 419 TTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLR 478

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G+ PD +TY+ ++    K  +   G  + K M+ +G  P++  YNVLLN L K   +  
Sbjct: 479 AGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKN 538

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGY 603
           A  L   + + G+ PD ITYNT++ G+
Sbjct: 539 ADMLLDAMLNVGVVPDDITYNTLLEGH 565



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 153/287 (53%), Gaps = 5/287 (1%)

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++D  + +   G     Y  +L+ GF  NV  ++IL+   C++G + +A  +F ++  R
Sbjct: 210 NLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKR 269

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            L P+++++++LI+G+CK G L  GF L  +M K   +PD    S LIN L     M  A
Sbjct: 270 SLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGA 329

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            R F++     LIPN  IF TL+ G  R  +     + +  M    ++PD++ +  L+ G
Sbjct: 330 HRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
               G L +A  +   M++RGL PD +TY+ +I G  +G ++   L + K M++NG+  D
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELD 449

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              ++ L+  + KE  +  A +   ++   G++PD +TY  ++  +C
Sbjct: 450 RVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFC 496



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 157/305 (51%), Gaps = 11/305 (3%)

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           LD G  L+V VF+ +M+ +   G++  A + +D +      P V+S++ LI G C+ G L
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNL 291

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
                L   +   R  P + TYS+LI+  CK  K+     L+  M +RGL P+ V+ + L
Sbjct: 292 DVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTL 351

Query: 430 INGLMG----DALRFFFQSV-RMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGM 481
           I+G       D ++  +Q +    L P++ ++NTL++G C+   L  A + V   +  G+
Sbjct: 352 IHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
              +PD +T+T LI G    G + +A+ +  +M + G+  D + +SA+I G+ K   +  
Sbjct: 412 ---RPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVID 468

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
                + M R G+ PD   Y ++++   K+ +     KL  ++   G  P+++TYN ++ 
Sbjct: 469 AERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLN 528

Query: 602 GYCSL 606
           G C L
Sbjct: 529 GLCKL 533



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 2/107 (1%)

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
            + ++L  G   +V  ++ +++   K  NI     +F  + +  + P +  +N L+N   
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYC 286

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
           K  NLD   +L   +      PD+ TY+ +I   C  N   +DG  +
Sbjct: 287 KVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENK--MDGAHR 331


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 218/429 (50%), Gaps = 21/429 (4%)

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVT--CNKILKRLCINGQIGNASSLFDVLLLV 242
           + GL+R+G +E A  +   +   G  P+     C  ++K+LC +G+   A  +     L 
Sbjct: 66  LRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRV-----LA 118

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
             +P+V+ ++ ++  +C   +L+ A +L   + +M + PD   Y+ LI GL   GR + G
Sbjct: 119 ACEPDVMAYNAMVAGYCVTGQLDAARRL---VADMPMEPDSYTYNTLIRGL--CGRGRTG 173

Query: 303 NELLL--TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           N L++    L RG   DVV ++ +++A        +A++  D M   G  P++I+Y++++
Sbjct: 174 NALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVV 233

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G+CQ+GR+ +A      +     EP+ ++Y+ ++ G C + +  D   L   M ++G  
Sbjct: 234 NGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYP 293

Query: 421 PDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  ++LI+     GL+  A+    Q  +    PN   +N ++   C+ K+    +  
Sbjct: 294 PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 353

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
             LM      PD++++  L+  +   G + +A+ L  Q+  +G TP +I+Y+ +I GL K
Sbjct: 354 VELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 413

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
                  L +   M   G+ PDI  Y+ + + L +E  ++ A++ F ++ D G+ P+ + 
Sbjct: 414 AGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVL 473

Query: 596 YNTIICGYC 604
           YN I+ G C
Sbjct: 474 YNAILLGLC 482



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 228/472 (48%), Gaps = 9/472 (1%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
           VR G ++E++ +   MS +    +P     L+  L  S    +  ++  A        Y 
Sbjct: 70  VRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACE-PDVMAYN 128

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            ++ G    G ++ A    R V      P+  T N +++ LC  G+ GNA  + D +L  
Sbjct: 129 AMVAGYCVTGQLDAA---RRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRR 185

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P+VVT++ L+ A CK +  ++A +L + M      PD+I Y+++++G+ + GR+ + 
Sbjct: 186 GCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDA 245

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            E L +    G + + V ++ V+           A +    M   G+ PNV+++++LI  
Sbjct: 246 IEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISF 305

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC++G +  A  +  Q+      P+ L+Y+ ++  FCK  K+    +  + M+ RG  PD
Sbjct: 306 LCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPD 365

Query: 423 AV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V     + +L   G +  A+    Q       P L  +NT++DG  +  +  + ++L  
Sbjct: 366 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLN 425

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    ++PD+IT++ +  G+  +  +  AI  F ++   G+ P+ + Y+AI+ GL K +
Sbjct: 426 EMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRR 485

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
                + +F  M  NG  P+ + Y +L+  L  E  +  A +L G+L  RG+
Sbjct: 486 ETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 174/370 (47%), Gaps = 17/370 (4%)

Query: 242 VGPKPNVVTFSTLIN----AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
           V   PN V    + N       +   LE+A +L   M  ++        + LI  L  +G
Sbjct: 49  VAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASG 108

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           R  E   +L        + DV+ +++++  Y   G +  A +    M      P+  +Y+
Sbjct: 109 RTAEARRVLAAC-----EPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYN 160

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI+GLC +GR   A  +   +L R   P ++TY+ L++  CK    +    L D M  +
Sbjct: 161 TLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK 220

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G  PD +  ++++NG+     + DA+ F          PN   +N ++ G C  +R  D 
Sbjct: 221 GCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDA 280

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            KL   M      P+V+T  +LI  +  +G +  A+ +  Q+ K G TP+ ++Y+ I+H 
Sbjct: 281 EKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHA 340

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
             K K +   +   +LM   G  PDI  YN LL  L +   +DAA++L  QL D+G  P 
Sbjct: 341 FCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 400

Query: 593 IITYNTIICG 602
           +I+YNT+I G
Sbjct: 401 LISYNTVIDG 410



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 163/325 (50%), Gaps = 13/325 (4%)

Query: 106 DSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLV 158
           D +   GC      Y+ ++    + G++D+++E    +   G    P+ V    ++  L 
Sbjct: 215 DEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGC--EPNTVSYNIVLKGLC 272

Query: 159 DSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
            +       KL   M  KG+      +  L++ L R+G++E A  +  Q+ + G  PN +
Sbjct: 273 TAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSL 332

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           + N IL   C   ++  A +  ++++  G  P++V+++TL+ A C+  +++ A +L + +
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 392

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            +    P LI Y+ +IDGL KAG+ KE  ELL   + +GL+ D++ +S++         +
Sbjct: 393 KDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRI 452

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A++ + ++ + G  PN + Y+ ++ GLC++     A  LF  ++     P+  TY+ L
Sbjct: 453 EEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTIL 512

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+G    G +++   L   +  RG+
Sbjct: 513 IEGLTYEGLVKEARELLGELCSRGV 537



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 7/222 (3%)

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV--CSLLINGLMGDALRFFFQ 443
           P     +  + G  + G L +   L ++M   GL+P A    C+ LI  L         +
Sbjct: 57  PHRAVSNDRLRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEAR 114

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            V     P++  +N ++ G C   +     +L   M M   +PD  T+  LIRG+  +G 
Sbjct: 115 RVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGLCGRGR 171

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
             +A+++   ML+RG  PDV+TY+ ++    K       + +   M   G APDI  YNV
Sbjct: 172 TGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNV 231

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           ++N + +E  +D A++    L   G EP+ ++YN ++ G C+
Sbjct: 232 VVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCT 273


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 200/406 (49%), Gaps = 5/406 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   + +T N ++  LC    +    S+   +  +G +P V+T +TLIN  C +  + +A
Sbjct: 107 GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQA 166

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L + M +M    D+  Y +LI+GL K G        L    +R  K +VVV+S++MD 
Sbjct: 167 VGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDG 226

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G V  A+     M   G  PN+++Y+ LI+GLC  GR  EA  L  +++   + P 
Sbjct: 227 LCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPD 286

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
           L   + L+D FCK GK+    S+   MI  G  PD    + LI+       M +A+R F 
Sbjct: 287 LQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             V    +P++ +F +L+ G C+ K     + L   M      PDV T T LI G    G
Sbjct: 347 LMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAG 406

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
              +A  LF  M K G  P++ T + I+ GL K   +S  + + K ME++ +  +I IY+
Sbjct: 407 RPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYS 466

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +LL+ +     L+AA +LF  L  +GL+ ++  Y  +I G C   S
Sbjct: 467 ILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGS 512



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 228/489 (46%), Gaps = 10/489 (2%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK-----GF 178
           ++  IDE++++F  M+ M    S      L+  +V          L + M          
Sbjct: 53  KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
                ++N L R  ++   F +   + + G  P ++T   ++  LC+ G +  A  L D 
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADH 172

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +  +    +V T+  LIN  CK      A      M E +  P++++YS ++DGL K G 
Sbjct: 173 MEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGL 232

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + E   L      +G++ ++V ++ ++      G    A    D M+  G  P++   +I
Sbjct: 233 VSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNI 292

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+   C++G++++A  + G +++    P + TY+SLI  +C   K+ +   ++  M+ RG
Sbjct: 293 LVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG 352

Query: 419 LKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             PD VV + LI+G   D     A+    +  +M  +P++  + TL+ G C+  R     
Sbjct: 353 RLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAK 412

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +LF+ M  Y   P++ T  V++ G+  +  LS A+ L   M K  L  +++ YS ++ G+
Sbjct: 413 ELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGM 472

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
                ++    +F  +   G+  ++ IY +++  L K+ +LD A  L   + + G  P+ 
Sbjct: 473 CSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNN 532

Query: 594 ITYNTIICG 602
            TYN  + G
Sbjct: 533 CTYNVFVQG 541



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 202/394 (51%), Gaps = 5/394 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NGL + G    A    R++ +R + PN+V  + I+  LC +G +  A +L   +
Sbjct: 184 TYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEM 243

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +PN+VT++ LI   C   + ++A  L + MM+M + PDL + +IL+D   K G++
Sbjct: 244 NGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKV 303

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   ++   +  G   DV  ++S++  Y     +  A++ +  M++ G LP+++ ++ L
Sbjct: 304 MQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSL 363

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+   + +A  L  ++      P + T+++LI GFC++G+      L+ NM K G 
Sbjct: 364 IHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQ 423

Query: 420 KPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+   C+++++G     L+ +A+       +  L  N+ I++ L+DG C   +     +
Sbjct: 424 VPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWE 483

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           LF  +    ++ +V  +T++I+G+  QGSL  A  L   M + G  P+  TY+  + GL 
Sbjct: 484 LFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLL 543

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
             K I+  +    +M   G + D A    ++N L
Sbjct: 544 TKKEIARSIKYLTIMRDKGFSVDAATTEFIINYL 577



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 11/505 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYM-SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           D++ L+   VR+     ++ +  +M S +GI      +  +++CL     V   + +   
Sbjct: 78  DFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGT 137

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G          L+NGL  +G +  A  +   + +  +  ++ T   ++  LC  G 
Sbjct: 138 MFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGD 197

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A      +     KPNVV +ST+++  CK+  + +A  L + M    + P+L+ Y+ 
Sbjct: 198 TLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYAC 257

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL   GR KE   LL   +  G++ D+ + + ++DA+   G V +A      M+  G
Sbjct: 258 LIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTG 317

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V +Y+ LI   C Q ++ EA  +F  ++ R   P ++ ++SLI G+CK   +    
Sbjct: 318 EGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAM 377

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L + M K G  PD    + LI G         A   F    +   +PNL     ++DG 
Sbjct: 378 HLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGL 437

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+    ++ V L   M   N+  +++ +++L+ G+ S G L++A  LF  +  +GL  +V
Sbjct: 438 CKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINV 497

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
             Y+ +I GL K  ++     +   ME NG  P+   YNV +  L+ +  +  ++K    
Sbjct: 498 YIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTI 557

Query: 584 LTDRGLEPDIITYNTIICGYCSLNS 608
           + D+G   D  T   II  Y S N 
Sbjct: 558 MRDKGFSVDAATTEFII-NYLSTNE 581



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 1/147 (0%)

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDV 523
           +LK   + + LF  M      P V   T+L+  I      ++AI L   M    G+  D 
Sbjct: 53  KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           IT + +I+ L + K ++ G  +   M + G+ P +     L+N L  + N+  A+ L   
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADH 172

Query: 584 LTDRGLEPDIITYNTIICGYCSLNSCL 610
           +       D+ TY  +I G C     L
Sbjct: 173 MEKMWYPLDVYTYGVLINGLCKTGDTL 199


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 217/436 (49%), Gaps = 6/436 (1%)

Query: 175 GKGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
            + F  Y E L  G L     E+AF +  +++    +P+IV   ++L       +     
Sbjct: 32  ARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI 91

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
                + L G   ++ +F+ LI+ FC+ ++L  A  +   MM++   P ++ +  L+ G 
Sbjct: 92  YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF 151

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
               R+ +   L++  +  G + +VVV+++++D     G++  A++  + M   G   +V
Sbjct: 152 CLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ L+ GLC  GR  +A  +   ++ R + P ++T+++LID F K G L +   LY  
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           MI+  + P+ V  + +INGL     + DA + F         PN+  +NTL+ G C+ + 
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             + +KLF  M       D+ T+  LI G    G L  A+ +F  M+ R +TPD+IT+  
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++HGL     I   L  F  M  +     I  YN++++ L K   ++ A +LF +L   G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451

Query: 589 LEPDIITYNTIICGYC 604
           ++PD  TY  +I G C
Sbjct: 452 VKPDARTYTIMILGLC 467



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 195/387 (50%), Gaps = 30/387 (7%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++++ G+ P+IVT   +L   C+  +IG+A SL  +++  G +PNVV ++TLI+  CK  
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +L  A +L N M +  L  D++ Y+ L+ GL  +GR  +   +L   + R +  DVV F+
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++D +V  G++  A + Y  M+     PN ++Y+ +I GLC  GRL +A   F  +  +
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
              P+++TY++LI GFCK   + +G  L+  M   G   D                    
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD-------------------- 350

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                     +F +NTL+ G C++ +    + +F  M    + PD+ITH +L+ G+   G
Sbjct: 351 ----------IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            + SA++ F  M +      ++ Y+ +IHGL K   +     +F  +   GV PD   Y 
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGL 589
           +++  L K      A +L  ++ + G+
Sbjct: 461 IMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 187/399 (46%), Gaps = 47/399 (11%)

Query: 220 LKRLCINGQIGNASSLFDVLL---LVGPKPNVVTFS----TLINAFCKEAKLEKAFQLYN 272
           ++RL + G   + +  F  ++   L+G       FS     L   F    + E AF L+ 
Sbjct: 1   MRRLIVTGIATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFF 60

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M+    +P ++ ++ L+       R +                 V+ FS  M+ Y    
Sbjct: 61  EMVHSQPLPSIVDFTRLLTATANLRRYET----------------VIYFSQKMELY---- 100

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
                          G   ++ S++ILI   C+  RL  A  + G+++    EPS++T+ 
Sbjct: 101 ---------------GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFG 145

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRM 447
           SL+ GFC   ++ D FSL   M+K G +P+ VV + LI+GL  +     AL    +  + 
Sbjct: 146 SLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            L  ++  +NTL+ G C   R +D  ++   M   +I PDV+T T LI     QG+L  A
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             L+ +M++  + P+ +TY++II+GL     +      F LM   G  P++  YN L++ 
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             K   +D  +KLF +++  G   DI TYNT+I GYC +
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/347 (20%), Positives = 131/347 (37%), Gaps = 114/347 (32%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   + G+++ ++E+   M   G+         L++ L  S       ++ R M 
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        +  L++  +++G ++ A  +++++IQ    PN VT N I+  LC++G++ 
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298

Query: 231 NASSLFDVLLLVGPKPNVVTFSTL-----------------------------------I 255
           +A   FD++   G  PNVVT++TL                                   I
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLII------------------------------ 285
           + +C+  KL  A  ++  M+   + PD+I                               
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418

Query: 286 -----YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
                Y+I+I GL KA ++++  EL       G+K                         
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK------------------------- 453

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                     P+  +Y+I+I GLC+ G   EA       LIRR++  
Sbjct: 454 ----------PDARTYTIMILGLCKNGPRREA-----DELIRRMKEE 485



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/104 (22%), Positives = 53/104 (50%)

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A  LFF+M+     P ++ ++ ++      +     ++  + ME  G++ D+  + +
Sbjct: 52  FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++   +   L  AL + G++   G EP I+T+ +++ G+C +N
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 211/414 (50%), Gaps = 8/414 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL--LLVGPKPNVVTFSTLINA 257
           ++  ++Q G  P+I T N +L   C  G++  A +L   +     G  PN VT++ +IN 
Sbjct: 216 VYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVING 275

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
             ++ +LEKA QL ++M  +        Y+ LI GL     +++   LLL   + G+   
Sbjct: 276 LARKGELEKAAQLVDIM-RLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPT 334

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           VV +++++D     G+   A   +D M   G LP++I+Y+ LI G C+ G L +A  LFG
Sbjct: 335 VVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFG 394

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
            +    L P++LTY+ LIDG+C+ G L     L + M +    PD    ++L+NG     
Sbjct: 395 DLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVR 454

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            +     FF + +   L P+ F +NT +     +   T+  +L   M +  I  D +T+ 
Sbjct: 455 NLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYN 514

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           VLI G+   GSL  A +L+ +M+  GL  D +TY+ +IH   +   +    ++F  M  +
Sbjct: 515 VLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVAS 574

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           G++P +  Y + ++   +  NL  A   F ++ + G+EP+ +TYN ++   C +
Sbjct: 575 GLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRM 628



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 236/496 (47%), Gaps = 39/496 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ L++++ + G++D++V +   M        P+ V    +++ L     + +  +L   
Sbjct: 232 YNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDI 291

Query: 173 MR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR       F  Y  L+ GLL +  +E A  +  ++   G VP +VT N ++  L   G 
Sbjct: 292 MRLSKKASAF-TYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGN 350

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A   FD +   G  P+++T+++LIN +CK   L++A  L+  +    L P ++ Y+I
Sbjct: 351 AEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNI 410

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDG  + G L+    L     +     DV  ++ +M+    + ++      +D ML+ G
Sbjct: 411 LIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKG 470

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+  +Y+  I      G +  A  L  ++++R +    +TY+ LIDG CK+G L+D +
Sbjct: 471 LEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAY 530

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L+  M+  GL+ D V  + LI+                                C   R
Sbjct: 531 VLWMKMVTDGLRLDCVTYTCLIHAH------------------------------CERGR 560

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   +F  M    + P V+T+T+ I     +G+L  A   F +ML+ G+ P+ +TY+ 
Sbjct: 561 LIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNV 620

Query: 529 IIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           ++H L + G+  S   H  +++ER G+ P+   Y +L++   KE N   A++L+ ++  +
Sbjct: 621 LMHALCRMGRTESAYQHFHEMLER-GLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQK 679

Query: 588 GLEPDIITYNTIICGY 603
           G+ PD  T+N +  G+
Sbjct: 680 GIHPDHCTHNALFKGF 695



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 214/431 (49%), Gaps = 10/431 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    R G+++++ ++   M  +    S      L++ L+  + V +   L   M 
Sbjct: 269 YNVVINGLARKGELEKAAQLVDIMR-LSKKASAFTYNPLITGLLARDFVEKAGALLLEME 327

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L++GL + G  E A     ++  +G +P+++T N ++   C  G + 
Sbjct: 328 NEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLK 387

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF  L   G  P V+T++ LI+ +C+   LE A +L   M E D +PD+  Y+IL+
Sbjct: 388 QALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILM 447

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G      L          L +GL+ D   +++ + A + IG +  A Q  + M+  G  
Sbjct: 448 NGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGIS 507

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            + ++Y++LI GLC+ G L +A  L+ +++   L    +TY+ LI   C+ G+L +  ++
Sbjct: 508 SDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNI 567

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +D M+  GL P  V  ++ I+     G +  A  +F + +   + PN   +N LM   CR
Sbjct: 568 FDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCR 627

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           + R     + F  M    + P+  T+T+LI G   +G+   AI L+ +M ++G+ PD  T
Sbjct: 628 MGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCT 687

Query: 526 YSAIIHGLFKG 536
           ++A+  G  +G
Sbjct: 688 HNALFKGFGEG 698



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 141/275 (51%), Gaps = 6/275 (2%)

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           + +  +  M   G  P V   + +++ L    R  +   ++  +L   +EPS+ TY++L+
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 396 DGFCKSGKLRDGFSLYDNMIKR--GLKPDAVVCSLLINGLMGDA-LRFFFQSV---RMTL 449
           D FCK+G++    +L  +M  R  G  P+ V  +++INGL     L    Q V   R++ 
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK 296

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
             + F +N L+ G            L + M    I P V+T+  LI G+   G+  +A +
Sbjct: 297 KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQV 356

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
            F +M  +GL PD+ITY+++I+G  K  N+   L +F  ++R G+ P +  YN+L++   
Sbjct: 357 KFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC 416

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  +L+ A +L  ++T+    PD+ TY  ++ G C
Sbjct: 417 RLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSC 451



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 174/388 (44%), Gaps = 44/388 (11%)

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           S F  +   G  P V   + ++      A+ +    +Y+ M+++ + P +  Y+ L+D  
Sbjct: 180 SAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSF 239

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            KAGR+ +                 V     M+A        RA          G LPN 
Sbjct: 240 CKAGRMDQA----------------VALLKDMEA--------RA---------AGCLPND 266

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRL--EPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           ++Y+++I GL ++G L +A  L   V I RL  + S  TY+ LI G      +    +L 
Sbjct: 267 VTYNVVINGLARKGELEKAAQL---VDIMRLSKKASAFTYNPLITGLLARDFVEKAGALL 323

Query: 412 DNMIKRGLKPDAVVCSLLINGLM----GDALRFFFQSVRMT-LIPNLFIFNTLMDGCCRL 466
             M   G+ P  V  + LI+GL      +A +  F  +R   L+P+L  +N+L++G C+ 
Sbjct: 324 LEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKA 383

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                 + LF  +    + P V+T+ +LI G    G L  A  L  +M +    PDV TY
Sbjct: 384 GNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTY 443

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +++G    +N+++    F  M   G+ PD   YN  ++  +    +  A +L  ++  
Sbjct: 444 TILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMML 503

Query: 587 RGLEPDIITYNTIICGYCSLNSCLIDGY 614
           RG+  D +TYN +I G C   S L D Y
Sbjct: 504 RGISSDTVTYNVLIDGLCKTGS-LKDAY 530



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 9/161 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  +   G++ E+  IF  M   G  LSP +V     +       ++   Y   R 
Sbjct: 548 YTCLIHAHCERGRLIEAKNIFDGMVASG--LSPSVVTYTIFIHTYCRRGNLYLAYGWFRK 605

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G       Y  LM+ L R G  E+A+    ++++RG VPN  T   ++   C  G 
Sbjct: 606 MLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGN 665

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
             +A  L+  +   G  P+  T + L   F  E  +  A Q
Sbjct: 666 WVHAIRLYCEMHQKGIHPDHCTHNALFKGF-GEGHMYDAVQ 705


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 211/426 (49%), Gaps = 10/426 (2%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           GF V++ L + L+  G++E A     ++ +    P   +CN +L +    G+       F
Sbjct: 24  GFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFF 83

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             ++  G KP V T++ +I+  CKE  +E A  L+  M    L+PD + Y+ +IDG  K 
Sbjct: 84  KDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKV 143

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GRL +         D   + DV+ ++++++ +   G + + ++ +  M   G  PNV+SY
Sbjct: 144 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSY 203

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRR--LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           S L+   C++G + +A   +  V +RR  L P+  TY+SLID +CK G L D F L + M
Sbjct: 204 STLVDAFCKEGMMQQAIKFY--VDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261

Query: 415 IKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           ++ G++ + V  + LI+GL G     + L    + V + +   +  F  L+DG C+ K  
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLV 321

Query: 470 TDTVKLF-MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
           +  +  F  +   + ++ +   +T +I G+     + +A  LF QM ++GL PD   Y++
Sbjct: 322 SKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTS 381

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++ G FK  N+   L +   M   G+  D+  Y  L+  L     L  A     ++   G
Sbjct: 382 LMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 441

Query: 589 LEPDII 594
           + PD +
Sbjct: 442 IHPDEV 447



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 187/368 (50%), Gaps = 6/368 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P   + + L++ F K  K +   + +  M+     P +  Y+I+ID + K G ++    L
Sbjct: 58  PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGL 117

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
                 RGL  D V ++S++D +  +G +   V  ++ M +    P+VI+Y+ LI   C+
Sbjct: 118 FEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 177

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G+L +    F ++    L+P++++YS+L+D FCK G ++     Y +M + GL P+   
Sbjct: 178 FGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 237

Query: 426 CSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            + LI+     G + DA R   + +++ +  N+  +  L+DG C  +  T+ + L   M 
Sbjct: 238 YTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMV 297

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDVITYSAIIHGLFKGKNI 539
             +IK  V+T  VLI G+     +S AI  F ++    GL  +   Y+A+I GL KG  +
Sbjct: 298 ELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQV 357

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                +F+ M + G+ PD   Y  L++   K+ N+  AL L  ++ + G++ D++ Y ++
Sbjct: 358 EAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSL 417

Query: 600 ICGYCSLN 607
           + G    N
Sbjct: 418 VWGLSHCN 425



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 207/455 (45%), Gaps = 39/455 (8%)

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
            G F   +S LI+    +G ++E+++ F+ M    ++        L+             
Sbjct: 25  FGVFDALFSVLID----LGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 80

Query: 168 KLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
           +  + M G G       Y  +++ + ++G +E A  +  ++  RG +P+ VT N ++   
Sbjct: 81  RFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGF 140

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
              G++ +    F+ +  +  +P+V+T++ LIN FCK  KL K  + +  M    L P++
Sbjct: 141 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNV 200

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + YS L+D   K G +++  +  +     GL  +   ++S++DAY  IG++  A +  + 
Sbjct: 201 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANE 260

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           ML  G   NV++Y+ LI GLC      E   L  +++   ++ +++T+  LIDG CK   
Sbjct: 261 MLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCK--- 317

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQ-SVRMTLIPNLFIFNTLMDG 462
                                      N L+  A+ +F + S    L  N  I+  ++DG
Sbjct: 318 ---------------------------NKLVSKAIDYFGRISNDFGLQANAAIYTAMIDG 350

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+  +      LF  M    + PD   +T L+ G   QG++  A+ L  +M++ G+  D
Sbjct: 351 LCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLD 410

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           ++ Y++++ GL     +       + M   G+ PD
Sbjct: 411 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 445



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 5/226 (2%)

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRF 440
           P    + +L       G + +    +  M +  + P    C+ L++     G      RF
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           F   +     P +F +N ++D  C+         LF  M    + PD +T+  +I G   
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G L   +  F +M      PDVITY+A+I+   K   +  GL  F+ M+RNG+ P++  
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           Y+ L++   KE  +  A+K +  +   GL P+  TY ++I  YC +
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKI 248



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 152/347 (43%), Gaps = 44/347 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+ + ++G++D++V  F  M DM     PD++    L++C      + +  +  R 
Sbjct: 133 YNSMIDGFGKVGRLDDTVCFFEEMKDM--CCEPDVITYNALINCFCKFGKLPKGLEFFRE 190

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G       Y  L++   ++G+++ A   +  + + G VPN  T   ++   C  G 
Sbjct: 191 MKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGN 250

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD---------- 278
           + +A  L + +L VG + NVVT++ LI+  C      +   L + M+E+D          
Sbjct: 251 LSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCV 310

Query: 279 --------------------------LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
                                     L  +  IY+ +IDGL K  +++    L      +
Sbjct: 311 LIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQK 370

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           GL  D   ++S+MD     G+V  A+   D+M+  G   ++++Y+ L+ GL    +L +A
Sbjct: 371 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKA 430

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
                +++   + P  +   S++    + G + +   L   ++K  L
Sbjct: 431 RSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMKHQL 477



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 137/328 (41%), Gaps = 56/328 (17%)

Query: 86  VFDKMVIQFGKTYNFFRL--FRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYM 138
            ++ M+  FGK         F + + D  C+     Y+ LI  + + GK+ + +E F  M
Sbjct: 132 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREM 191

Query: 139 SDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLCRAMRGKGFCVYEF----LMNGLLR 190
              G  L P++V    S LVD+      + Q  K    MR  G    E+    L++   +
Sbjct: 192 KRNG--LKPNVVS--YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCK 247

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
            G + +AF +  +++Q G   N+VT   ++  LC          L D ++ +  K  VVT
Sbjct: 248 IGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVT 307

Query: 251 FSTLINAFCKEA------------------------------------KLEKAFQLYNLM 274
           F  LI+  CK                                      ++E A  L+  M
Sbjct: 308 FCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQM 367

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            +  LVPD   Y+ L+DG FK G + E   L    ++ G+KLD++ ++S++        +
Sbjct: 368 AQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQL 427

Query: 335 GRAVQTYDRMLNGGFLPN-VISYSILIK 361
            +A    + M+  G  P+ V+  S+L K
Sbjct: 428 QKARSFLEEMIGEGIHPDEVLCISVLKK 455



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 71/163 (43%)

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
           S R   +P   +F+ L      L    + ++ F  M  + + P   +   L+   A  G 
Sbjct: 16  STRNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGK 75

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
                  F  M+  G  P V TY+ +I  + K  ++     +F+ M+  G+ PD   YN 
Sbjct: 76  TDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNS 135

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +++   K   LD  +  F ++ D   EPD+ITYN +I  +C  
Sbjct: 136 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF 178


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 237/492 (48%), Gaps = 41/492 (8%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRG 175
           +I+   ++ ++D++  I   M D GI  +PDL     ++  L  S ++ +  ++   M  
Sbjct: 89  IIKELCKMKEMDKAESIVQKMVDSGI--APDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 146

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            G       Y  L++G    G+   +  + +Q+   G +P +  CN  +  L  +G+   
Sbjct: 147 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 206

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCK--EAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           A  +FD ++L GPKP+++++ST+++ +    ++ L     ++NLM+   + P+  +++IL
Sbjct: 207 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 266

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I+   + G + +   +     ++G+  D V F++V+ +   IG +  A+  ++ M++ G 
Sbjct: 267 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 326

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY-SSLIDGFCKSGKLRDGF 408
            P+   Y  LI+G C  G LV+A  L  +++ + + P  + Y SS+I+  CK G++ +G 
Sbjct: 327 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 386

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            + D M++ G +P                              N+  FN+LM+G C +  
Sbjct: 387 DIMDMMVQTGQRP------------------------------NVVTFNSLMEGYCLVGN 416

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   L   M    I+P+   +  L+ G    G +  A+ +F  ML +G+ P  + YS 
Sbjct: 417 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 476

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           I+HGLF+ +  +    MF  M  +G    I  Y V+L  L +    D A  L  +L    
Sbjct: 477 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 536

Query: 589 LEPDIITYNTII 600
           ++ DIIT+N +I
Sbjct: 537 VKFDIITFNIVI 548



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 246/522 (47%), Gaps = 29/522 (5%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           +I  L +S   D A  V ++MV + G   N               Y+ LI  Y   G  +
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMV-EAGTRPNSIT------------YNSLIHGYSISGMWN 170

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLM 185
           ESV +F  MS  G+  + D     +  L       +   +  +M  KG       Y  ++
Sbjct: 171 ESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 230

Query: 186 NG--LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +G        + +  ++   ++ +G  PN    N ++      G +  A  +F+ +   G
Sbjct: 231 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 290

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+ VTF+T+I++ C+  +L+ A   +N M+++ + P   +Y  LI G    G L +  
Sbjct: 291 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 350

Query: 304 ELLLTALDRGLKLD-VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           EL+   +++ +    V  FSS+++     G V       D M+  G  PNV++++ L++G
Sbjct: 351 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 410

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C  G + EA  L   +    +EP+   Y +L+DG+CK+G++ D  +++ +M+ +G+KP 
Sbjct: 411 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 470

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
           +V+ S++++GL        A + F + +      ++  +  ++ G CR    TD   + +
Sbjct: 471 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCR-NNCTDEANMLL 529

Query: 478 --LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
             L  M N+K D+IT  ++I  +   G    A  LF  +   GL P++ TYS +I  L K
Sbjct: 530 EKLFAM-NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 588

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            ++     ++F  +E++G A D  + N ++ ML+ +  +  A
Sbjct: 589 EESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 630



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 199/387 (51%), Gaps = 8/387 (2%)

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           +G++  A  LF  ++  G  P ++  +++I   CK  +++KA  +   M++  + PDL  
Sbjct: 61  DGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFT 120

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           YS++IDGL K+  + +   +L   ++ G + + + ++S++  Y   G    +V+ + +M 
Sbjct: 121 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 180

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK-- 403
           + G +P V + +  I  L + GR  EA  +F  ++++  +P +++YS+++ G+  +    
Sbjct: 181 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 240

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNT 458
           L D  ++++ M+ +G+ P+  V ++LIN     G+M  A+  F       +IP+   F T
Sbjct: 241 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 300

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++   CR+ R  D +  F  M    + P    +  LI+G  + G L  A  L  +M+ + 
Sbjct: 301 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 360

Query: 519 LTPDVITY-SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           + P  + Y S+II+ L K   ++ G  +  +M + G  P++  +N L+       N++ A
Sbjct: 361 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 420

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
             L   +   G+EP+   Y T++ GYC
Sbjct: 421 FALLDAMASIGIEPNCYIYGTLVDGYC 447



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/469 (23%), Positives = 214/469 (45%), Gaps = 44/469 (9%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+ G ++ G ++ A  +  +++++G +P I+ CN I+K LC   ++  A S+   ++  G
Sbjct: 54  LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 113

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG----------- 292
             P++ T+S +I+  CK   ++KA ++   M+E    P+ I Y+ LI G           
Sbjct: 114 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 173

Query: 293 ------------------------LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
                                   LFK GR  E   +  + + +G K D++ +S+++  Y
Sbjct: 174 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 233

Query: 329 VGIGD--VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               D  +      ++ ML  G  PN   ++ILI    + G + +A  +F  +  + + P
Sbjct: 234 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 293

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
             +T++++I   C+ G+L D    +++M+  G+ P   V   LI G          + + 
Sbjct: 294 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 353

Query: 447 MTLI------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             ++      P +  F+++++  C+  R  +   +  +M     +P+V+T   L+ G   
Sbjct: 354 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 413

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G++  A  L   M   G+ P+   Y  ++ G  K   I   L +F+ M   GV P   +
Sbjct: 414 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 473

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           Y+++L+ L +     AA K+F ++ + G    I TY  ++ G C  N+C
Sbjct: 474 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCR-NNC 521



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 121/236 (51%), Gaps = 5/236 (2%)

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI----NGLMGDA 437
           R   P++ TY+ LID + +  +   G ++   ++K GL PD    SL+     +G +  A
Sbjct: 8   RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 67

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
              F + +   ++P + I N+++   C++K       +   M    I PD+ T++++I G
Sbjct: 68  HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 127

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +    ++  A  +  QM++ G  P+ ITY+++IHG       +  + +FK M   GV P 
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 187

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS-LNSCLID 612
           +   N  ++ L K    + A  +F  +  +G +PDII+Y+T++ GY +  +SCL D
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 243



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/308 (20%), Positives = 137/308 (44%), Gaps = 29/308 (9%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +A  +++ ++  + P P +++F    N     N+ +   V    D+ D        M++Q
Sbjct: 348 KAKELISEMMNKDIPPPGVKYFSSIIN-----NLCKEGRVAEGKDIMD--------MMVQ 394

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
            G+  N               ++ L+E Y  +G ++E+  +   M+ +GI  +  +   L
Sbjct: 395 TGQRPNVVT------------FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 442

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +     +  +     + R M  KG      +Y  +++GL +      A  M  ++I+ G 
Sbjct: 443 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 502

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
             +I T   +L  LC N     A+ L + L  +  K +++TF+ +I+A  K  + ++A +
Sbjct: 503 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 562

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L++ +    LVP++  YS++I  L K    +E + L ++    G   D  + + ++   +
Sbjct: 563 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLL 622

Query: 330 GIGDVGRA 337
              +V +A
Sbjct: 623 NKAEVAKA 630


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 243/508 (47%), Gaps = 10/508 (1%)

Query: 113 CDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC 170
           C Y++  +I  Y   GK DE+  +       G   S      +++CL     V +  K+ 
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 366

Query: 171 RAMR---GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
             M+         Y  L++ L R G ++ AF +   + + G  PN+ T N ++ RLC + 
Sbjct: 367 EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A ++F+ +      P+ +TF +LI+   K  +++ A+++Y  M++ D   + I+Y+
Sbjct: 427 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 486

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI   F  GR ++G+++    +++    D+ + ++ MD     G+  +    ++ +   
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
            F+P+  SYSILI GL + G   E   LF  +  +        Y+ +IDGFCK GK+   
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           + L + M  +G +P  V    +I+GL     + +A   F ++    +  N+ I+++L+DG
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             ++ R  +   +   +    + P++ T   L+  +     ++ A++ F  M +   TP+
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +TY  +I+GL K +  +     ++ M++ G+ P    Y  +++ L K  N+  A  LF 
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSCL 610
           +    G  PD   YN +I G  + N  +
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAM 814



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/508 (25%), Positives = 236/508 (46%), Gaps = 45/508 (8%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           + GK     ++F +   D   +   Y+ LI+   R GK+D + E+   M   G++ +   
Sbjct: 355 KMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414

Query: 150 VQRLMSCLVDSNSVGQY--------YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMH 201
           V  ++  L  S  + +         YK+C       FC    L++GL + G +++A+ ++
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE-ITFCS---LIDGLGKVGRVDDAYKVY 470

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            +++      N +    ++K    +G+  +   ++  ++     P++   +T ++   K 
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            + EK   ++  +     VPD   YSILI GL KAG   E  EL  +  ++G  LD   +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           + V+D +   G V +A Q  + M   GF P V++Y  +I GL +  RL EA  LF +   
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           +R+E +++ YSSLIDGF K G++ + + + + ++++G                       
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG----------------------- 687

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
                  L PNL+ +N+L+D   + +   + +  F  M      P+ +T+ +LI G+   
Sbjct: 688 -------LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
              + A + + +M K+G+ P  I+Y+ +I GL K  NI+    +F   + NG  PD A Y
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGL 589
           N ++  L        A  LF +   RGL
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGL 828



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 241/503 (47%), Gaps = 14/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSN----SVGQYYK 168
           Y+  I+++ ++GK+D + + F  +   G  L PD V    ++  L  +N    +V  +  
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANG--LKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           L +  R      Y  ++ G    G  + A+ +  +   +G +P+++  N IL  L   G+
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F+ +      PN+ T++ LI+  C+  KL+ AF+L + M +  L P++   +I
Sbjct: 359 VDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++D L K+ +L E   +      +    D + F S++D    +G V  A + Y++ML+  
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N I Y+ LIK     GR  +   ++  ++ +   P L   ++ +D   K+G+   G 
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           ++++ +  R   PDA   S+LI+GL+      +    F+       + +   +N ++DG 
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +     +L   M     +P V+T+  +I G+A    L  A +LF +   + +  +V
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + YS++I G  K   I     + + + + G+ P++  +N LL+ L+K   ++ AL  F  
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + +    P+ +TY  +I G C +
Sbjct: 718 MKELKCTPNQVTYGILINGLCKV 740



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/617 (20%), Positives = 261/617 (42%), Gaps = 37/617 (5%)

Query: 23  SKTHISDLQFN-QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMR- 80
           ++  +S L F  Q   ++  L +  +   AI++F+W       P+  +  + LL    R 
Sbjct: 52  AENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARC 111

Query: 81  ---DVASHVFDKM-VIQFGKT--------------------YNFFRLFRD-SLGDFGCDY 115
              D    +  +M V  FG +                    Y+  ++ R          Y
Sbjct: 112 RNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAY 171

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + LI  +  +   D  + +F  M ++G   +  L   L+        V     L   M+ 
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
                   +Y   ++   + G ++ A+    ++   G  P+ VT   ++  LC   ++  
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  +F+ L      P    ++T+I  +    K ++A+ L         +P +I Y+ ++ 
Sbjct: 292 AVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G++ E  + +   + +    ++  ++ ++D     G +  A +  D M   G  P
Sbjct: 352 CLRKMGKVDEALK-VFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV + +I++  LC+  +L EAC +F ++  +   P  +T+ SLIDG  K G++ D + +Y
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470

Query: 412 DNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           + M+    + +++V + LI     +G   D  + +   +     P+L + NT MD   + 
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                   +F  +      PD  ++++LI G+   G  +    LF+ M ++G   D   Y
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I G  K   ++    + + M+  G  P +  Y  +++ L K   LD A  LF +   
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650

Query: 587 RGLEPDIITYNTIICGY 603
           + +E +++ Y+++I G+
Sbjct: 651 KRIELNVVIYSSLIDGF 667



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 35/278 (12%)

Query: 331 IGDVGRAVQ---TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           + DV RA++    Y+R       P   +  +L+   C+    ++   + G++ +    PS
Sbjct: 75  LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQ--ILGEMSVAGFGPS 132

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
           + T   ++ G  K+ KLR+G+ +   M K                       F F+    
Sbjct: 133 VNTCIEMVLGCVKANKLREGYDVVQMMRK-----------------------FKFR---- 165

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
              P    + TL+     +  +   + LF  M     +P V   T LIRG A +G + SA
Sbjct: 166 ---PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           + L  +M    L  D++ Y+  I    K   + +    F  +E NG+ PD   Y  ++ +
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L K   LD A+++F  L      P    YNT+I GY S
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 68/146 (46%)

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           GC +  +  +   +  +M  +  +P    +T LI   ++       + LF QM + G  P
Sbjct: 142 GCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEP 201

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            V  ++ +I G  K   +   L +   M+ + +  DI +YNV ++   K   +D A K F
Sbjct: 202 TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF 261

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLN 607
            ++   GL+PD +TY ++I   C  N
Sbjct: 262 HEIEANGLKPDEVTYTSMIGVLCKAN 287


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 197/393 (50%), Gaps = 34/393 (8%)

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G GF      Y  +++G   +G IE A  +   +  +G  P+  T   ++  +C  G+
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 258

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  AS LFD ++ +G  PN VT++TLI+ +C +  LE+AF   + M++  ++P +  Y++
Sbjct: 259 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+  LF  GR+ E ++++     +G+  D + ++ +++ Y   G+  RA   ++ ML+ G
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P  ++Y+ LI  L ++ R+ EA  LF ++L + + P ++ ++++IDG C +G +   F
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAF 438

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L   M ++ + PD V                               FNTLM G CR  +
Sbjct: 439 MLLKEMDRKSVPPDEVT------------------------------FNTLMQGRCREGK 468

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   L   M    IKPD I++  LI G   +G +  A  +  +ML  G  P ++TY+A
Sbjct: 469 VEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNA 528

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           +I  L K +   +   + K M   G++PD + Y
Sbjct: 529 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 561



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 204/393 (51%), Gaps = 5/393 (1%)

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
           + G++  A      +  +G KPNVV+++T+I+ +     +E A ++ + M    + PD  
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y  LI G+ K GRL+E + L    ++ GL  + V +++++D Y   GD+ RA    D M
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +  G +P+V +Y++L+  L  +GR+ EA  +  ++  + + P  +TY+ LI+G+ + G  
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 364

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           +  F L++ M+ +G++P  V  + LI        M +A   F + +   + P++ +FN +
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG C          L   M   ++ PD +T   L++G   +G +  A +L  +M  RG+
Sbjct: 425 IDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGI 484

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PD I+Y+ +I G  +  +I     +   M   G  P +  YN L+  L K    D A +
Sbjct: 485 KPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE 544

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
           L  ++ ++G+ PD  TY ++I G  ++++ + D
Sbjct: 545 LLKEMVNKGISPDDSTYLSLIEGMGNVDTLVED 577



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 145/372 (38%), Gaps = 91/372 (24%)

Query: 68  AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGK 127
             LI  + +    + AS +FDKMV + G   N               Y+ LI+ Y   G 
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMV-EIGLVPN------------AVTYNTLIDGYCNKGD 293

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEF 183
           ++ +      M   GI  S      L+  L     +G+   + + MR KG       Y  
Sbjct: 294 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 353

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NG  R G  + AF +H +++ +G  P  VT   ++  L    ++  A  LF+ +L  G
Sbjct: 354 LINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413

Query: 244 PKPNV-----------------------------------VTFSTLINAFCKEAKLEKAF 268
             P+V                                   VTF+TL+   C+E K+E+A 
Sbjct: 414 VSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 473

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            L + M    + PD I Y+ LI G                                   Y
Sbjct: 474 MLLDEMKXRGIKPDHISYNTLISG-----------------------------------Y 498

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC--QQGRLVEACGLFGQVLIRRLEP 386
              GD+  A    D ML+ GF P +++Y+ LIK LC  Q+G L E   L  +++ + + P
Sbjct: 499 GRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE--LLKEMVNKGISP 556

Query: 387 SLLTYSSLIDGF 398
              TY SLI+G 
Sbjct: 557 DDSTYLSLIEGM 568



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 86/175 (49%)

Query: 429 LINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
           L+ G +  A  F      +   PN+  +NT++ G           ++   M +  I+PD 
Sbjct: 184 LLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDS 243

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
            T+  LI G+  +G L  A  LF +M++ GL P+ +TY+ +I G     ++         
Sbjct: 244 YTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDE 303

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           M + G+ P ++ YN+L++ L  E  +  A  +  ++  +G+ PD ITYN +I GY
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 358



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 12/197 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN----SVGQYYKLC 170
           Y+ LI    R  ++ E+ ++F  + D G+  SPD++  + + ++D +    +V + + L 
Sbjct: 386 YTSLIYVLSRRNRMKEADDLFEKILDQGV--SPDVI--MFNAMIDGHCANGNVERAFMLL 441

Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           + M  K        +  LM G  R+G +E A  +  ++  RG  P+ ++ N ++      
Sbjct: 442 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRR 501

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G I +A  + D +L +G  P ++T++ LI   CK  + + A +L   M+   + PD   Y
Sbjct: 502 GDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 561

Query: 287 SILIDGLFKAGRLKEGN 303
             LI+G+     L E N
Sbjct: 562 LSLIEGMGNVDTLVEDN 578


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 237/492 (48%), Gaps = 41/492 (8%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRG 175
           +I+   ++ ++D++  I   M D GI  +PDL     ++  L  S ++ +  ++   M  
Sbjct: 251 IIKELCKMKEMDKAESIVQKMVDSGI--APDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 308

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            G       Y  L++G    G+   +  + +Q+   G +P +  CN  +  L  +G+   
Sbjct: 309 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 368

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCK--EAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           A  +FD ++L GPKP+++++ST+++ +    ++ L     ++NLM+   + P+  +++IL
Sbjct: 369 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 428

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I+   + G + +   +     ++G+  D V F++V+ +   IG +  A+  ++ M++ G 
Sbjct: 429 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 488

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY-SSLIDGFCKSGKLRDGF 408
            P+   Y  LI+G C  G LV+A  L  +++ + + P  + Y SS+I+  CK G++ +G 
Sbjct: 489 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 548

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            + D M++ G +P                              N+  FN+LM+G C +  
Sbjct: 549 DIMDMMVQTGQRP------------------------------NVVTFNSLMEGYCLVGN 578

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   L   M    I+P+   +  L+ G    G +  A+ +F  ML +G+ P  + YS 
Sbjct: 579 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 638

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           I+HGLF+ +  +    MF  M  +G    I  Y V+L  L +    D A  L  +L    
Sbjct: 639 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 698

Query: 589 LEPDIITYNTII 600
           ++ DIIT+N +I
Sbjct: 699 VKFDIITFNIVI 710



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 246/522 (47%), Gaps = 29/522 (5%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           +I  L +S   D A  V ++MV + G   N               Y+ LI  Y   G  +
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMV-EAGTRPNSIT------------YNSLIHGYSISGMWN 332

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLM 185
           ESV +F  MS  G+  + D     +  L       +   +  +M  KG       Y  ++
Sbjct: 333 ESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 392

Query: 186 NG--LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +G        + +  ++   ++ +G  PN    N ++      G +  A  +F+ +   G
Sbjct: 393 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 452

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+ VTF+T+I++ C+  +L+ A   +N M+++ + P   +Y  LI G    G L +  
Sbjct: 453 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 512

Query: 304 ELLLTALDRGLKLD-VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           EL+   +++ +    V  FSS+++     G V       D M+  G  PNV++++ L++G
Sbjct: 513 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 572

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C  G + EA  L   +    +EP+   Y +L+DG+CK+G++ D  +++ +M+ +G+KP 
Sbjct: 573 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 632

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
           +V+ S++++GL        A + F + +      ++  +  ++ G CR    TD   + +
Sbjct: 633 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCR-NNCTDEANMLL 691

Query: 478 --LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
             L  M N+K D+IT  ++I  +   G    A  LF  +   GL P++ TYS +I  L K
Sbjct: 692 EKLFAM-NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 750

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            ++     ++F  +E++G A D  + N ++ ML+ +  +  A
Sbjct: 751 EESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 792



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 199/387 (51%), Gaps = 8/387 (2%)

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           +G++  A  LF  ++  G  P ++  +++I   CK  +++KA  +   M++  + PDL  
Sbjct: 223 DGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFT 282

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           YS++IDGL K+  + +   +L   ++ G + + + ++S++  Y   G    +V+ + +M 
Sbjct: 283 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 342

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK-- 403
           + G +P V + +  I  L + GR  EA  +F  ++++  +P +++YS+++ G+  +    
Sbjct: 343 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 402

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNT 458
           L D  ++++ M+ +G+ P+  V ++LIN     G+M  A+  F       +IP+   F T
Sbjct: 403 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 462

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++   CR+ R  D +  F  M    + P    +  LI+G  + G L  A  L  +M+ + 
Sbjct: 463 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 522

Query: 519 LTPDVITY-SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           + P  + Y S+II+ L K   ++ G  +  +M + G  P++  +N L+       N++ A
Sbjct: 523 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 582

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
             L   +   G+EP+   Y T++ GYC
Sbjct: 583 FALLDAMASIGIEPNCYIYGTLVDGYC 609



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/469 (23%), Positives = 214/469 (45%), Gaps = 44/469 (9%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+ G ++ G ++ A  +  +++++G +P I+ CN I+K LC   ++  A S+   ++  G
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG----------- 292
             P++ T+S +I+  CK   ++KA ++   M+E    P+ I Y+ LI G           
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 293 ------------------------LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
                                   LFK GR  E   +  + + +G K D++ +S+++  Y
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 395

Query: 329 VGIGD--VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               D  +      ++ ML  G  PN   ++ILI    + G + +A  +F  +  + + P
Sbjct: 396 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 455

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
             +T++++I   C+ G+L D    +++M+  G+ P   V   LI G          + + 
Sbjct: 456 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 515

Query: 447 MTLI------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             ++      P +  F+++++  C+  R  +   +  +M     +P+V+T   L+ G   
Sbjct: 516 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 575

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G++  A  L   M   G+ P+   Y  ++ G  K   I   L +F+ M   GV P   +
Sbjct: 576 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 635

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           Y+++L+ L +     AA K+F ++ + G    I TY  ++ G C  N+C
Sbjct: 636 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCR-NNC 683



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 121/236 (51%), Gaps = 5/236 (2%)

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI----NGLMGDA 437
           R   P++ TY+ LID + +  +   G ++   ++K GL PD    SL+     +G +  A
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 229

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
              F + +   ++P + I N+++   C++K       +   M    I PD+ T++++I G
Sbjct: 230 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 289

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +    ++  A  +  QM++ G  P+ ITY+++IHG       +  + +FK M   GV P 
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS-LNSCLID 612
           +   N  ++ L K    + A  +F  +  +G +PDII+Y+T++ GY +  +SCL D
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 405



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/308 (20%), Positives = 137/308 (44%), Gaps = 29/308 (9%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +A  +++ ++  + P P +++F    N     N+ +   V    D+ D        M++Q
Sbjct: 510 KAKELISEMMNKDIPPPGVKYFSSIIN-----NLCKEGRVAEGKDIMD--------MMVQ 556

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
            G+  N               ++ L+E Y  +G ++E+  +   M+ +GI  +  +   L
Sbjct: 557 TGQRPNVVT------------FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 604

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +     +  +     + R M  KG      +Y  +++GL +      A  M  ++I+ G 
Sbjct: 605 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 664

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
             +I T   +L  LC N     A+ L + L  +  K +++TF+ +I+A  K  + ++A +
Sbjct: 665 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 724

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L++ +    LVP++  YS++I  L K    +E + L ++    G   D  + + ++   +
Sbjct: 725 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLL 784

Query: 330 GIGDVGRA 337
              +V +A
Sbjct: 785 NKAEVAKA 792


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 222/434 (51%), Gaps = 8/434 (1%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           G   Y  L+  L +  +       + Q+++ G  PN++  N ++  LC +G + +A S+ 
Sbjct: 192 GLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESII 251

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           + +   G KP+  T++++I  +C+   L+ AF+++N M E    P+   YS LI+GL  +
Sbjct: 252 NKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNS 311

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GR+ E  + +      G+   V  F++ + A   +G +  A + +  M   G  PNV +Y
Sbjct: 312 GRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTY 371

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI G  +  R+  A GLF ++    + P+ +TY++L++   ++ ++     +++ M K
Sbjct: 372 TSLISGQ-RVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGK 428

Query: 417 RGLKPDAVVCSLLING--LMGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G  P+    + LI G   +GD   A+      ++    P L  +N ++ G C       
Sbjct: 429 HGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDV 488

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            +++  LM     +PD  ++T LI G      +  A  +F +M+ RGL P+ +TY+A+I 
Sbjct: 489 AIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALIS 548

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           G  K + +     M + M+R+G  P++  YNVL++ L K+ N   A +L   + +  + P
Sbjct: 549 GYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISP 608

Query: 592 DIITYNTIICGYCS 605
           D++TY+T+I G C+
Sbjct: 609 DVVTYSTVINGLCN 622



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 237/497 (47%), Gaps = 37/497 (7%)

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHM 200
           MG++    L+ +L    + S  + +Y+++ R        +Y  ++N L + G + +A  +
Sbjct: 191 MGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESI 250

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
             +V + G  P+  T   ++   C N  + +A  +F+ +   G +PN  T+STLIN  C 
Sbjct: 251 INKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCN 310

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
             ++ +A    + M    ++P +  ++  I  L   GR+++  ++ +    +G K +V  
Sbjct: 311 SGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYT 370

Query: 321 FSSVMD----AYVGIGDVGRAVQ--------TYDRMLN--------------------GG 348
           ++S++     + + IG   R  +        TY+ ++N                     G
Sbjct: 371 YTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHG 430

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LPN  SY+ LI+G C  G   +A  +   +L  R  P+L+TY+ +I G+C SG      
Sbjct: 431 CLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAI 490

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            + + M   G +PD    + LI+G      M  A   F + +   L PN   +  L+ G 
Sbjct: 491 RVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGY 550

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+ ++     ++   M     +P+V T+ VLI G+  Q + S A  L   ML+  ++PDV
Sbjct: 551 CKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDV 610

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TYS +I+GL     I + L MF  M ++G  P++  Y+ L+  L +E  ++ A ++F +
Sbjct: 611 VTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSE 670

Query: 584 LTDRGLEPDIITYNTII 600
           L  +GL PD +TY  +I
Sbjct: 671 LKKQGLIPDEVTYVKMI 687



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 194/384 (50%), Gaps = 3/384 (0%)

Query: 224 CIN-GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           C N  ++  A +  D+    GPK  + T++TL+    K          Y+ ++   L P+
Sbjct: 168 CSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPN 227

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           L+IY+ +I+ L K G +++   ++      G+K D   ++S++  Y    D+  A + ++
Sbjct: 228 LLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFN 287

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           RM   G  PN  +YS LI GLC  GR+ EA     ++    + P++ T+++ I   C  G
Sbjct: 288 RMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMG 347

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGDALRFFFQSVRMTLIPNLFIFNTLM 460
           ++ D + ++ +M K+G KP+    + LI+G  +   A+  F +  R  ++PN   +N LM
Sbjct: 348 RIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALM 407

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +           + +F +MG +   P+  ++  LIRG  + G    A+ +   MLK   T
Sbjct: 408 NVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPT 467

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P ++TY+ II G     +  V + + +LM+ NG  PD   Y  L++   K   ++ A  +
Sbjct: 468 PTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGM 527

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
           F ++ DRGL P+ +TY  +I GYC
Sbjct: 528 FNEMMDRGLCPNEVTYTALISGYC 551



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 231/506 (45%), Gaps = 39/506 (7%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           ++F+  +      Y+ +I  Y R   +D + EIF  M + G                + N
Sbjct: 253 KVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEG---------------CEPN 297

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
           +                  Y  L+NGL   G +  A     ++ + G +P + T    + 
Sbjct: 298 AA----------------TYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIV 341

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  G+I +A  +F  +   G KPNV T+++LI+    +     A  L++ M    +VP
Sbjct: 342 ALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVP 398

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           + + Y+ L++ L +   +     +       G   +   ++ ++  Y  IGD  +A+   
Sbjct: 399 NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSML 458

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             ML G   P +++Y+I+IKG C  G    A  +   +     +P   +Y+ LI GFCK 
Sbjct: 459 TNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKI 518

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIF 456
            K+     +++ M+ RGL P+ V  + LI+G   D     A R   +  R    PN+  +
Sbjct: 519 SKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTY 578

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N L+ G  +    +   +L  +M    I PDV+T++ +I G+ + G++  A+ +F +M+K
Sbjct: 579 NVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVK 638

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G  P++ TYS++I  L +   +     MF  +++ G+ PD   Y  ++ + +    +D 
Sbjct: 639 HGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDR 698

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICG 602
           A    G++ + G +P + TY+ +I G
Sbjct: 699 AFDFLGEMINAGCQPTLQTYDVLIKG 724



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 232/522 (44%), Gaps = 55/522 (10%)

Query: 66  NIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFR--DSLGDFGCD-----YSFL 118
           +   +I+ + +S M+   +  +  M++ + +  +    F   + + + GC+     YS L
Sbjct: 246 DAESIINKVFKSGMKP-DTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTL 304

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG- 177
           I      G+++E+++  + M+  G+  +       +  L D   +   +K+   M+ KG 
Sbjct: 305 INGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGC 364

Query: 178 ---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++G   + V   A  +  ++ + G VPN VT N ++  L  N +I +A  
Sbjct: 365 KPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALI 421

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F+++   G  PN  +++ LI  +C     EKA  +   M++    P L+ Y+I+I G  
Sbjct: 422 VFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKG-- 479

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
                                            Y   GD   A++  + M   G  P+  
Sbjct: 480 ---------------------------------YCDSGDTDVAIRVLELMKANGCQPDEW 506

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           SY+ LI G C+  ++  A G+F +++ R L P+ +TY++LI G+CK  KL     + + M
Sbjct: 507 SYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERM 566

Query: 415 IKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            + G +P+    ++LI+GL        A       +   + P++  ++T+++G C     
Sbjct: 567 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAI 626

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              +++F  M  +   P++ T++ LI+ +  +G +  A  +F ++ K+GL PD +TY  +
Sbjct: 627 PLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKM 686

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
           I        +         M   G  P +  Y+VL+  L  E
Sbjct: 687 IEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/523 (23%), Positives = 238/523 (45%), Gaps = 52/523 (9%)

Query: 125 IGKIDESVEIFAYMSDMG----IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
           +G+I+++ +IF  M   G    +Y    L+  QR     V   ++G ++++ R       
Sbjct: 346 MGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQR-----VSRMAIGLFHRMSRDGVVPNT 400

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
             Y  LMN L+    I++A  +   + + G +PN  + N++++  C  G    A S+   
Sbjct: 401 VTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTN 460

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +L   P P +VT++ +I  +C     + A ++  LM      PD   Y+ LI G  K  +
Sbjct: 461 MLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISK 520

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           ++  + +    +DRGL  + V +++++  Y     +  A +  +RM   G  PNV +Y++
Sbjct: 521 MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI GL +Q     A  L   +L  ++ P ++TYS++I+G C +G +     +++ M+K G
Sbjct: 581 LIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHG 640

Query: 419 LKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC---RLKRAT 470
             P+    S LI      G + +A   F +  +  LIP+   +  +++ C    ++ RA 
Sbjct: 641 CLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAF 700

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQ---------GSLSSAILLFFQMLKRGLTP 521
           D +   +  G    +P + T+ VLI+G+ ++          + +S      Q++ +    
Sbjct: 701 DFLGEMINAG---CQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINK---- 753

Query: 522 DVIT-----------------YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           DVI+                 Y A++  L +        ++++ M      P+   Y   
Sbjct: 754 DVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHF 813

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L  L++   +D A+ +F  ++D+  E  +  Y  +IC  C L+
Sbjct: 814 LISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLH 856



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 190/461 (41%), Gaps = 12/461 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+ Y   G  D ++ +   M   G          L+S     + +     +   M 
Sbjct: 473 YNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMM 532

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G C     Y  L++G  +   ++ A  M  ++ + G  PN+ T N ++  L       
Sbjct: 533 DRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFS 592

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L  V+L     P+VVT+ST+IN  C    +  A +++N M++   +P+L  YS LI
Sbjct: 593 GAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLI 652

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L + GR++E  E+      +GL  D V +  +++  V  G V RA      M+N G  
Sbjct: 653 QALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQ 712

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P + +Y +LIKGL  Q  +V     + +++      S  T+   I        L    + 
Sbjct: 713 PTLQTYDVLIKGL--QNEMV-----YHKLVALPNAASTSTFDDQIINKDVISVLSSKLAE 765

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            D  + R L  DA++  L  +G   +A   +   V  +  PN   +   +    R  +  
Sbjct: 766 LDFELSRQLY-DALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVD 824

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + +F  M     +  +  +  LI  +        A  +F +ML R L  D I ++ +I
Sbjct: 825 LAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILI 884

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
           +GL       + +    +ME N   P      +L    +KE
Sbjct: 885 NGLLGAGYKDLCMEFLHIMETNRRNPSSHARTILAREALKE 925



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 74/147 (50%)

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++  C      T  +    +      K  + T+T L+  +      S+ +  + Q+L+ G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           L P+++ Y+++I+ L K  N+     +   + ++G+ PD   Y  ++    +  +LD+A 
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCS 605
           ++F ++ + G EP+  TY+T+I G C+
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCN 310


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 207/422 (49%), Gaps = 32/422 (7%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NGL ++G IE A     +  + GF P+ VT N ++  LC  G I     + D +L  G
Sbjct: 275 LVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKG 332

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + +V T+++LI+  CK  ++++A ++ + M+  D  P+ + Y+ LI  L K   ++   
Sbjct: 333 FELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAAT 392

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           EL      +G+  DV  F+S++       +   A++ ++ M   G  P+  +YSILI+ L
Sbjct: 393 ELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESL 452

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C + RL EA  L  ++ +     +++ Y++LIDG CK+ ++ D   ++D M   G+   +
Sbjct: 453 CSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSS 512

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           V                               +NTL++G C+ KR  +  +L   M M  
Sbjct: 513 VT------------------------------YNTLINGLCKSKRVEEAAQLMDQMIMEG 542

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           +KPD  T+T +++    QG +  A  +   M   G  PD++TY  +I GL K   + V  
Sbjct: 543 LKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVAS 602

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            + + ++  G+      YN ++  L K      A++LF ++ ++G  PD+ITY  +  G 
Sbjct: 603 KLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGL 662

Query: 604 CS 605
           C+
Sbjct: 663 CN 664



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 216/443 (48%), Gaps = 25/443 (5%)

Query: 110 DFGCDYS-----FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNS 162
           + GC+ +      L+    + G+I+E++  F Y  +      PD V    L++ L  +  
Sbjct: 262 ESGCELTSVSVNVLVNGLCKEGRIEEALR-FIYEEE---GFCPDQVTFNALVNGLCRTGH 317

Query: 163 VGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
           + Q  ++   M  KGF      Y  L++GL + G I+ A  +   ++ R   PN VT N 
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNT 377

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++  LC    +  A+ L  VL   G  P+V TF++LI   C  +  E A +L+  M E  
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG 437

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             PD   YSILI+ L    RLKE   LL      G   +VVV+++++D       VG A 
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             +D+M   G   + ++Y+ LI GLC+  R+ EA  L  Q+++  L+P   TY++++  F
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVR---MTLIP 451
           C+ G ++    +  NM   G +PD V    LI GL      D      +SV+   M L P
Sbjct: 558 CQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTP 617

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS-QGSLSSAILL 510
               +N ++   C+ KR  + ++LF  M      PDVIT+ ++ RG+ +  G +  A+  
Sbjct: 618 Q--AYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDF 675

Query: 511 FFQMLKRGLTPDVITYSAIIHGL 533
             +ML++G+ P+  ++  +  GL
Sbjct: 676 TVEMLEKGILPEFPSFGFLAEGL 698



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 202/410 (49%), Gaps = 7/410 (1%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC 259
           +H +++     P++ T N +++ LC   Q+  A  + + +   G +P+  TF+TL+  F 
Sbjct: 186 LHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFI 245

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           +EA +E A ++  LM+E       +  ++L++GL K GR++E   L     + G   D V
Sbjct: 246 EEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEA--LRFIYEEEGFCPDQV 303

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            F+++++     G + + ++  D ML  GF  +V +Y+ LI GLC+ G + EA  +   +
Sbjct: 304 TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM 363

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
           + R  EP+ +TY++LI   CK   +     L   +  +G+ PD    + LI GL      
Sbjct: 364 VSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNR 423

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A+  F +       P+ F ++ L++  C  +R  + + L   M +     +V+ +  L
Sbjct: 424 EIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTL 483

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+     +  A  +F QM   G++   +TY+ +I+GL K K +     +   M   G+
Sbjct: 484 IDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGL 543

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            PD   Y  +L    ++ ++  A  +   +T  G EPDI+TY T+I G C
Sbjct: 544 KPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 225/484 (46%), Gaps = 12/484 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L++ ++    ++ ++ I   M + G  L+   V  L++ L     + +  +      
Sbjct: 237 FTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI--YE 294

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GFC     +  L+NGL R G I+    M   ++++GF  ++ T N ++  LC  G+I 
Sbjct: 295 EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEID 354

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +   ++    +PN VT++TLI   CKE  +E A +L  ++    ++PD+  ++ LI
Sbjct: 355 EAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLI 414

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL      +   EL     ++G   D   +S ++++      +  A+     M   G  
Sbjct: 415 QGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCA 474

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            NV+ Y+ LI GLC+  R+ +A  +F Q+ +  +  S +TY++LI+G CKS ++ +   L
Sbjct: 475 RNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQL 534

Query: 411 YDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTL---IPNLFIFNTLMDGCCR 465
            D MI  GLKPD    + ++      GD  R       MTL    P++  + TL+ G C+
Sbjct: 535 MDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCK 594

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             R     KL   + M  +      +  +I+ +  +     A+ LF +M+++G  PDVIT
Sbjct: 595 AGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVIT 654

Query: 526 YSAIIHGLFKGKN-ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           Y  +  GL  G   I   +     M   G+ P+   +  L   L      D  ++L   +
Sbjct: 655 YKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMV 714

Query: 585 TDRG 588
            ++G
Sbjct: 715 MEKG 718



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 186/365 (50%), Gaps = 7/365 (1%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           KP+   ++  ++   K  KL+    L++ M+   + PD+  ++ILI  L KA +L+    
Sbjct: 161 KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAIL 220

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +L    + GL+ D   F+++M  ++   DV  A++  + M+  G     +S ++L+ GLC
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLC 280

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           ++GR+ EA     +       P  +T+++L++G C++G ++ G  + D M+++G + D  
Sbjct: 281 KEGRIEEALRFIYEE--EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVY 338

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + LI+GL     + +A+      V     PN   +NTL+   C+        +L  ++
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               + PDV T   LI+G+    +   A+ LF +M ++G  PD  TYS +I  L   + +
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              L + K ME +G A ++ +YN L++ L K   +  A  +F Q+   G+    +TYNT+
Sbjct: 459 KEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTL 518

Query: 600 ICGYC 604
           I G C
Sbjct: 519 INGLC 523


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 244/508 (48%), Gaps = 10/508 (1%)

Query: 113 CDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC 170
           C Y++  +I  Y   GK DE+  +       G   S      +++CL     V +  ++ 
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVF 366

Query: 171 RAMR---GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
             M+         Y  L++ L R G ++ AF +   + + G  PN+ T N ++ RLC + 
Sbjct: 367 EEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A ++F+ +      P+ +TF +LI+   K  +++ A+++Y  M++ D   + I+Y+
Sbjct: 427 KLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYT 486

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI   F  GR ++G+++    +++    D+ + ++ MD     G+  +    ++ + + 
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSR 546

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
            F+P+  SYSILI GL + G   E   LF  +  +        Y+ +IDGFCK GK+   
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           + L + M  +G +P  V    +I+GL     + +A   F ++    +  N+ I+++L+DG
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             ++ R  +   +   +    + P+V T   L+  +     ++ A++ F  M +   TP+
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +TY  +I+GL K +  +     ++ M++ G+ P    Y  +++ L K  N+  A  LF 
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSCL 610
           +    G  PD   YN +I G  + N  +
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAM 814



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 244/512 (47%), Gaps = 20/512 (3%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           + GK     R+F +   D   +   Y+ LI+   R GK+D + E+   M   G++ +   
Sbjct: 355 KMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRT 414

Query: 150 VQRLMSCLVDSNSVGQY--------YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMH 201
           V  ++  L  S  + +         YK+C       FC    L++GL + G +++A+ ++
Sbjct: 415 VNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDE-ITFCS---LIDGLGKVGRVDDAYKIY 470

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            +++      N +    ++K    +G+  +   ++  ++     P++   +T ++   K 
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKA 530

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            + EK   ++  +     VPD   YSILI GL KAG   E  EL  +  ++G  LD   +
Sbjct: 531 GEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           + V+D +   G V +A Q  + M   GF P V++Y  +I GL +  RL EA  LF +   
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
           +R+E +++ YSSLIDGF K G++ + + + + ++++GL P+    + L++ L     + +
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINE 710

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           AL  F     +   PN   +  L++G C++++       +  M    +KP  I++T +I 
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+A  G+++ A  LF +    G  PD   Y+A+I GL  G        +F+   R G+  
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHI 830

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
                 VLL+ L K   L+ A  +   L + G
Sbjct: 831 HNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 241/503 (47%), Gaps = 14/503 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSN----SVGQYYK 168
           Y+  I+++ ++GK+D + + F  +   G  L PD V    ++  L  +N    +V  +  
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANG--LKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           L +  R      Y  ++ G    G  + A+ +  +   +G +P+++  N IL  L   G+
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F+ +      PN+ T++ LI+  C+  KL+ AF+L + M +  L P++   +I
Sbjct: 359 VDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNI 417

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++D L K+ +L E   +      +    D + F S++D    +G V  A + Y++ML+  
Sbjct: 418 MVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSD 477

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N I Y+ LIK     GR  +   ++  ++ +   P L   ++ +D   K+G+   G 
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGR 537

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           ++++ +  R   PDA   S+LI+GL+      +    F+       + +   +N ++DG 
Sbjct: 538 AMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +     +L   M     +P V+T+  +I G+A    L  A +LF +   + +  +V
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + YS++I G  K   I     + + + + G+ P++  +N LL+ L+K   ++ AL  F  
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 717

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + +    P+ +TY  +I G C +
Sbjct: 718 MKELKCTPNQVTYGILINGLCKV 740



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 133/628 (21%), Positives = 264/628 (42%), Gaps = 59/628 (9%)

Query: 23  SKTHISDLQFN-QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRD 81
           ++  +S L F  Q   ++  L +  +   AI++F+W       P+  +  + LL    R 
Sbjct: 52  AENALSALNFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARC 111

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE---NYVRIGKIDESVEIFAYM 138
                 D+++ +             S+  FG   +  IE   + V+  K+ E  ++   M
Sbjct: 112 RNFDALDQILGEM------------SVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 139 SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVI 194
                  +      L+      N       L + M+  G+     ++  L+ G  ++G +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           ++A  +  ++       +IV  N  +      G++  A   F  +   G KP+ VT++++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I   CK  +L++A +++  + +   VP    Y+ +I G   AG+  E   LL     +G 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTY--------------------------------- 341
              V+ ++ ++     +G V  A++ +                                 
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFEL 399

Query: 342 -DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
            D M   G  PNV + +I++  LC+  +L EAC +F Q+  +   P  +T+ SLIDG  K
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGK 459

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFI 455
            G++ D + +Y+ M+    + +++V + LI     +G   D  + +   V     P+L +
Sbjct: 460 VGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQL 519

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
            NT MD   +         +F  +      PD  ++++LI G+   G  +    LF+ M 
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           ++G   D   Y+ +I G  K   ++    + + M+  G  P +  Y  +++ L K   LD
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGY 603
            A  LF +   + +E +++ Y+++I G+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGF 667



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 35/278 (12%)

Query: 331 IGDVGRAVQ---TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           + DV RA++    Y+R       P   +  +L+   C+    ++   + G++ +    PS
Sbjct: 75  LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQ--ILGEMSVAGFGPS 132

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
           + T   ++    K+ KLR+GF +  NM K                       F F+    
Sbjct: 133 VNTCIEMVLSCVKANKLREGFDVVQNMRK-----------------------FKFR---- 165

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
              P    + TL+     +  +   + LF  M     +P V   T LIRG A +G + SA
Sbjct: 166 ---PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           + L  +M    L  D++ Y+  I    K   + +    F  +E NG+ PD   Y  ++ +
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L K   LD A+++F  L      P    YNT+I GY S
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 66/145 (45%)

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           C +  +  +   +   M  +  +P    +T LI   ++       + LF QM + G  P 
Sbjct: 143 CVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPT 202

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V  ++ +I G  K   +   L +   M+ + +  DI +YNV ++   K   +D A K F 
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262

Query: 583 QLTDRGLEPDIITYNTIICGYCSLN 607
           ++   GL+PD +TY ++I   C  N
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKAN 287


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 227/463 (49%), Gaps = 39/463 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  L++ LLR+ ++     ++  + + G  PN+ T N ++K LC N ++G A  + D +
Sbjct: 129 VYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEM 188

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKA------------------------------FQ 269
              G +P+ V+ +T+I+A CK  +L++A                              F 
Sbjct: 189 ARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFL 248

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           + + M+   L PD + Y+ ++    KA  L+    +L   +  G   +V  F+ ++  + 
Sbjct: 249 VVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFF 308

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G V  A+  ++ M+  G+ P+ ISY++LI+GLC  G L  A  +F  +      P + 
Sbjct: 309 DDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVR 368

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV---- 445
           TYS+LIDGF K+G L    S++++M   G KP+ VV + +++ L    +  F Q+     
Sbjct: 369 TYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVM--FDQAENLID 426

Query: 446 RMTL---IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +M+L    PN   FNTL+   C L RA   + +F  M  Y   P+  T+  L+ G+  +G
Sbjct: 427 KMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREG 486

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           +   A+ +  +ML  G    +++Y+  I GL + + I   + +   M   G+ PD   +N
Sbjct: 487 NCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFN 546

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            +++   KE N+ AA  + G++       +I+ Y +++ G CS
Sbjct: 547 AIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCS 589



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 190/402 (47%), Gaps = 10/402 (2%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P +   N +L  L     +     ++D +   G +PNV T++ LI A C+  ++  A +
Sbjct: 124 APTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARR 183

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           + + M      PD + ++ +I  L K  RL E   +L      G       +++V+ A  
Sbjct: 184 MLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGAS-----YNAVVHALC 238

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
           G   +       D M++ G  P+ ++Y+ ++   C+   L  AC +  +++     P++ 
Sbjct: 239 GQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQ 298

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALR--FFFQSV 445
           T++ L+ GF   GK+ D   +++ M+  G  P  +  ++LI GL  +GD  R  F F  +
Sbjct: 299 TFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCM 358

Query: 446 -RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            +   +P++  ++TL+DG  +       + ++  M     KP+V+ +T ++  +  +   
Sbjct: 359 GKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMF 418

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  L  +M      P+ +T++ +I  L         L++F  M R G  P+   YN L
Sbjct: 419 DQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNEL 478

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           L+ L +E N + AL++  ++ + G E  +++YNT I G C +
Sbjct: 479 LHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQM 520



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 110/511 (21%), Positives = 223/511 (43%), Gaps = 30/511 (5%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           N +L  L++ N     +  +         PN+     LI  L Q+D    A  + D+M  
Sbjct: 131 NHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMA- 189

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
                       R         ++ +I    ++ ++DE+  I A M+ +G   +      
Sbjct: 190 ------------RKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNA----- 232

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           ++  L     + + + +   M  +G       Y  ++    +   +  A  +  +++  G
Sbjct: 233 VVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEG 292

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
            VPN+ T   ++K    +G++ +A  +++ ++  G  P+ ++++ LI   C    L++A 
Sbjct: 293 CVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRAL 352

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            +++ M + D +PD+  YS LIDG  KAG L     +     + G K +VVV+++++D  
Sbjct: 353 FVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVL 412

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
                  +A    D+M      PN ++++ LI+ LC  GR   A  +F  +      P+ 
Sbjct: 413 CKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPND 472

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
            TY+ L+ G  + G   D   +   M+  G +   V  +  I+GL     + +A+    +
Sbjct: 473 RTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGR 532

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            +   + P+ F FN ++   C+         +   M   N   +++ +T L+ G+ SQ  
Sbjct: 533 MIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHK 592

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L  A++   +ML  G+ P+  T++ ++ G+F
Sbjct: 593 LDDAMVYLLKMLYEGICPNEATWNVLVRGIF 623



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 178/395 (45%), Gaps = 14/395 (3%)

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           ++RL   G +         + L G           I AF +    ++A + +      DL
Sbjct: 62  VRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTF-YRARHDL 120

Query: 280 ---VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
               P + +Y+ L+D L +   +     +       G++ +V  ++ ++ A      VG 
Sbjct: 121 GCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGA 180

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A +  D M   G  P+ +S++ +I  LC+  RL EA G+  +     + P   +Y++++ 
Sbjct: 181 ARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAE-----MTPVGASYNAVVH 235

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
             C   ++R+ F + D M+ RGL+PD V  + ++        +  A     + V    +P
Sbjct: 236 ALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVP 295

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N+  F  L+ G     +  D + ++  M      P  I++ VLIRG+   G L  A+ +F
Sbjct: 296 NVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVF 355

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             M K    PDV TYS +I G  K  ++ V + ++  M   G  P++ +Y  ++++L K+
Sbjct: 356 SCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKK 415

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              D A  L  +++     P+ +T+NT+I   C L
Sbjct: 416 VMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDL 450


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 208/414 (50%), Gaps = 43/414 (10%)

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD-LVP-DLIIYSILIDGLFKAGRL 299
           +G KP++ +++ L+   C +   ++A  L ++M +     P D++ Y+ +I+GL + G+L
Sbjct: 165 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQL 224

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   L    LDRG   DVV +SS++ A      + +A Q + RM+  G +P+ I Y+ L
Sbjct: 225 DKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL 284

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + G C  G+  EA G+F ++    +EP ++TY++L+D  CK+GK  +   ++D+++KRG 
Sbjct: 285 VHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH 344

Query: 420 KPDAVVCSLLING-------------------------------LMG---------DALR 439
           KPD+     L++G                               +MG         +AL 
Sbjct: 345 KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALL 404

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F    +  L P++  + T++D  C   R  D +  F  +    + P+++  T LI G+ 
Sbjct: 405 VFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLC 464

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
           +         L F+M+ RG+  D I ++AI+  L K   +    ++F LM R G+ P+  
Sbjct: 465 TCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTN 524

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
            YN L++    +  +D A+KL G +   G++P  +TYNTII GY S N  + DG
Sbjct: 525 TYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGY-SQNGRIEDG 577



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 220/461 (47%), Gaps = 15/461 (3%)

Query: 134 IFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRG-KGFC-----VYEFLM 185
           +   M ++G    PDL     L+  L D  +  Q   L   M   KG C      Y  ++
Sbjct: 158 VLRRMPELGC--KPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVI 215

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           NGLLR+G ++ A+ +   ++ RG  P++VT + I+  L     +  A+ +F  ++  G  
Sbjct: 216 NGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVM 275

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+ + +++L++ +C   K ++A  ++  M    + PD++ Y+ L+D L K G+  E  ++
Sbjct: 276 PDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKI 335

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
             + + RG K D   + +++  Y   G +       D M+  G       +++++    +
Sbjct: 336 FDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAK 395

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
             ++ EA  +F  +  + L P ++ Y +++D  C +G++ D  S ++++   GL P+ VV
Sbjct: 396 HNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVV 455

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            + LI+GL             F+ +   +  +   FN +M   C+  R  +   LF LM 
Sbjct: 456 FTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMV 515

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              I+P+  T+  LI G    G +  A+ L   M+  G+ P  +TY+ II+G  +   I 
Sbjct: 516 RIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIE 575

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            GL + + M+  GV P I  Y +LL  L +     AA +L+
Sbjct: 576 DGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELY 616



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 211/413 (51%), Gaps = 13/413 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I   +R G++D++  +F  M D G   SPD+V    ++S L  + ++ +  ++   
Sbjct: 211 YTTVINGLLREGQLDKAYSLFDAMLDRGP--SPDVVTYSSIISALSKTQAMDKATQVFTR 268

Query: 173 MRGKGF---CV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G    C+ Y  L++G    G  + A  + +++ + G  P++VT   ++  LC NG+
Sbjct: 269 MVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 328

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +FD L+  G KP+  T+ TL++ +  E  L +   L +LMM+  +     I+++
Sbjct: 329 STEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNM 388

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++    K  ++ E   +      +GL  D+V + +V+D     G V  A+  ++ + + G
Sbjct: 389 IMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG 448

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN++ ++ LI GLC   +  +   L  +++ R +    + +++++   CK G++ +  
Sbjct: 449 LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAK 508

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +L+D M++ G++P+    + LI+G      M +A++     V   + P+   +NT+++G 
Sbjct: 509 NLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGY 568

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            +  R  D + L   M    + P ++T+ +L++G+   G   +A  L+ +M+K
Sbjct: 569 SQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 197/429 (45%), Gaps = 32/429 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
             ++  L++      A   F    +   SP++   + +I  L ++   D A+ VF +MV 
Sbjct: 212 TTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMV- 270

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ- 151
                       ++ +      Y+ L+  Y   GK  E++ IF  M   G+   PD+V  
Sbjct: 271 ------------KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGV--EPDVVTY 316

Query: 152 -RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             LM  L  +    +  K+  ++  +G       Y  L++G   +G +     +   +++
Sbjct: 317 TALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMK 376

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +G        N I+     + ++  A  +F  +   G  P++V + T+++  C   +++ 
Sbjct: 377 KGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDD 436

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A   +N +    L P++++++ LI GL    +  +  EL    +DRG+ LD + F+++M 
Sbjct: 437 ALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMG 496

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G V  A   +D M+  G  PN  +Y+ LI G C  G++ EA  L G ++   ++P
Sbjct: 497 NLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKP 556

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
           S +TY+++I+G+ ++G++ DG +L   M  +G+ P  V   +L+ GL        FQ+ R
Sbjct: 557 SDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGL--------FQAGR 608

Query: 447 MTLIPNLFI 455
                 L++
Sbjct: 609 TVAAKELYL 617



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 166/407 (40%), Gaps = 124/407 (30%)

Query: 322 SSVMDAYVGIGDVGRA-----VQTYDRMLNGGFL---PNVISYSILIKGLCQQ-GRLVEA 372
           +S+ D    + DV RA     +  ++RM   G     PN+ +Y I+I G C++ GRL  A
Sbjct: 60  ASIFDLNRALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIVI-GCCRRLGRLDLA 118

Query: 373 CGLFGQVL--------------------------------IRRL-----EPSLLTYSSLI 395
               G+V+                                +RR+     +P L +Y+ L+
Sbjct: 119 FATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILL 178

Query: 396 DGFC-------------------------------------KSGKLRDGFSLYDNMIKRG 418
            G C                                     + G+L   +SL+D M+ RG
Sbjct: 179 KGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRG 238

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             PD V  S +I+ L     M  A + F + V+  ++P+  ++ +L+ G C   +  + +
Sbjct: 239 PSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAI 298

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG- 532
            +F  M  + ++PDV+T+T L+  +   G  + A  +F  ++KRG  PD  TY  ++HG 
Sbjct: 299 GIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGY 358

Query: 533 --------------LFKGKNISVGLHMFKL--------------------MERNGVAPDI 558
                         L   K + +G H+F +                    M + G+ PDI
Sbjct: 359 ATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDI 418

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             Y  +L++L     +D AL  F  L   GL P+I+ + T+I G C+
Sbjct: 419 VNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCT 465



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 53/299 (17%), Positives = 121/299 (40%), Gaps = 54/299 (18%)

Query: 33  NQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDK 89
            +A  I  +L+K  +   +  +    H   +   + +   L+ ++++  M+ +  H+F+ 
Sbjct: 330 TEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQ-LGHHIFNM 388

Query: 90  MVIQFGKTYN-------FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
           ++  + K          F  + +  L     +Y  +++     G++D+++  F  +   G
Sbjct: 389 IMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG 448

Query: 143 IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIEN 196
             L+P++V    L+  L   +   +  +L   M  +G C+    +  +M  L +KG +  
Sbjct: 449 --LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIE 506

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN--------- 247
           A ++   +++ G  PN  T N ++   C++G++  A  L  V++  G KP+         
Sbjct: 507 AKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIIN 566

Query: 248 --------------------------VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
                                     +VT+  L+    +  +   A +LY  M++ D V
Sbjct: 567 GYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWDTV 625


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 237/492 (48%), Gaps = 41/492 (8%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRG 175
           +I+   ++ ++D++  I   M D GI  +PDL     ++  L  S ++ +  ++   M  
Sbjct: 231 IIKELCKMKEMDKAESIVQKMVDSGI--APDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 288

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            G       Y  L++G    G+   +  + +Q+   G +P +  CN  +  L  +G+   
Sbjct: 289 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 348

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCK--EAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           A  +FD ++L GPKP+++++ST+++ +    ++ L     ++NLM+   + P+  +++IL
Sbjct: 349 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 408

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I+   + G + +   +     ++G+  D V F++V+ +   IG +  A+  ++ M++ G 
Sbjct: 409 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 468

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY-SSLIDGFCKSGKLRDGF 408
            P+   Y  LI+G C  G LV+A  L  +++ + + P  + Y SS+I+  CK G++ +G 
Sbjct: 469 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 528

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            + D M++ G +P                              N+  FN+LM+G C +  
Sbjct: 529 DIMDMMVQTGQRP------------------------------NVVTFNSLMEGYCLVGN 558

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   L   M    I+P+   +  L+ G    G +  A+ +F  ML +G+ P  + YS 
Sbjct: 559 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 618

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           I+HGLF+ +  +    MF  M  +G    I  Y V+L  L +    D A  L  +L    
Sbjct: 619 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 678

Query: 589 LEPDIITYNTII 600
           ++ DIIT+N +I
Sbjct: 679 VKFDIITFNIVI 690



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 246/522 (47%), Gaps = 29/522 (5%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           +I  L +S   D A  V ++MV + G   N               Y+ LI  Y   G  +
Sbjct: 266 IIDGLCKSKAMDKAERVLEQMV-EAGTRPNSIT------------YNSLIHGYSISGMWN 312

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLM 185
           ESV +F  MS  G+  + D     +  L       +   +  +M  KG       Y  ++
Sbjct: 313 ESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 372

Query: 186 NG--LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +G        + +  ++   ++ +G  PN    N ++      G +  A  +F+ +   G
Sbjct: 373 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 432

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+ VTF+T+I++ C+  +L+ A   +N M+++ + P   +Y  LI G    G L +  
Sbjct: 433 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 492

Query: 304 ELLLTALDRGLKLD-VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           EL+   +++ +    V  FSS+++     G V       D M+  G  PNV++++ L++G
Sbjct: 493 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 552

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C  G + EA  L   +    +EP+   Y +L+DG+CK+G++ D  +++ +M+ +G+KP 
Sbjct: 553 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 612

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
           +V+ S++++GL        A + F + +      ++  +  ++ G CR    TD   + +
Sbjct: 613 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCR-NNCTDEANMLL 671

Query: 478 --LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
             L  M N+K D+IT  ++I  +   G    A  LF  +   GL P++ TYS +I  L K
Sbjct: 672 EKLFAM-NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 730

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            ++     ++F  +E++G A D  + N ++ ML+ +  +  A
Sbjct: 731 EESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 772



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 199/387 (51%), Gaps = 8/387 (2%)

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           +G++  A  LF  ++  G  P ++  +++I   CK  +++KA  +   M++  + PDL  
Sbjct: 203 DGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFT 262

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           YS++IDGL K+  + +   +L   ++ G + + + ++S++  Y   G    +V+ + +M 
Sbjct: 263 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 322

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK-- 403
           + G +P V + +  I  L + GR  EA  +F  ++++  +P +++YS+++ G+  +    
Sbjct: 323 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 382

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNT 458
           L D  ++++ M+ +G+ P+  V ++LIN     G+M  A+  F       +IP+   F T
Sbjct: 383 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 442

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++   CR+ R  D +  F  M    + P    +  LI+G  + G L  A  L  +M+ + 
Sbjct: 443 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 502

Query: 519 LTPDVITY-SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           + P  + Y S+II+ L K   ++ G  +  +M + G  P++  +N L+       N++ A
Sbjct: 503 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 562

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
             L   +   G+EP+   Y T++ GYC
Sbjct: 563 FALLDAMASIGIEPNCYIYGTLVDGYC 589



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/469 (23%), Positives = 214/469 (45%), Gaps = 44/469 (9%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+ G ++ G ++ A  +  +++++G +P I+ CN I+K LC   ++  A S+   ++  G
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG----------- 292
             P++ T+S +I+  CK   ++KA ++   M+E    P+ I Y+ LI G           
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 315

Query: 293 ------------------------LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
                                   LFK GR  E   +  + + +G K D++ +S+++  Y
Sbjct: 316 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 375

Query: 329 VGIGD--VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               D  +      ++ ML  G  PN   ++ILI    + G + +A  +F  +  + + P
Sbjct: 376 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 435

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
             +T++++I   C+ G+L D    +++M+  G+ P   V   LI G          + + 
Sbjct: 436 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 495

Query: 447 MTLI------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             ++      P +  F+++++  C+  R  +   +  +M     +P+V+T   L+ G   
Sbjct: 496 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 555

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G++  A  L   M   G+ P+   Y  ++ G  K   I   L +F+ M   GV P   +
Sbjct: 556 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 615

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           Y+++L+ L +     AA K+F ++ + G    I TY  ++ G C  N+C
Sbjct: 616 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCR-NNC 663



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 121/236 (51%), Gaps = 5/236 (2%)

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI----NGLMGDA 437
           R   P++ TY+ LID + +  +   G ++   ++K GL PD    SL+     +G +  A
Sbjct: 150 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 209

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
              F + +   ++P + I N+++   C++K       +   M    I PD+ T++++I G
Sbjct: 210 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 269

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +    ++  A  +  QM++ G  P+ ITY+++IHG       +  + +FK M   GV P 
Sbjct: 270 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 329

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS-LNSCLID 612
           +   N  ++ L K    + A  +F  +  +G +PDII+Y+T++ GY +  +SCL D
Sbjct: 330 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 385



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/308 (20%), Positives = 137/308 (44%), Gaps = 29/308 (9%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +A  +++ ++  + P P +++F    N     N+ +   V    D+ D        M++Q
Sbjct: 490 KAKELISEMMNKDIPPPGVKYFSSIIN-----NLCKEGRVAEGKDIMD--------MMVQ 536

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
            G+  N               ++ L+E Y  +G ++E+  +   M+ +GI  +  +   L
Sbjct: 537 TGQRPNVVT------------FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 584

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +     +  +     + R M  KG      +Y  +++GL +      A  M  ++I+ G 
Sbjct: 585 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 644

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
             +I T   +L  LC N     A+ L + L  +  K +++TF+ +I+A  K  + ++A +
Sbjct: 645 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 704

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L++ +    LVP++  YS++I  L K    +E + L ++    G   D  + + ++   +
Sbjct: 705 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLL 764

Query: 330 GIGDVGRA 337
              +V +A
Sbjct: 765 NKAEVAKA 772


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 241/494 (48%), Gaps = 46/494 (9%)

Query: 107 SLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYM-SDMGIYLSPDLVQRLMSCLVDS 160
           S+  FGC+     Y+ LI+ + R G I  +  +   + +  G    PD+V          
Sbjct: 81  SMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVS--------- 131

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
                               +  L NG  +  +++  F ++  V+ +   PN+VT +  +
Sbjct: 132 --------------------FNTLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWI 170

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
              C +G++  A   F+ +      PNVVTF+ LI+ +CK   LE    LY  M  + + 
Sbjct: 171 DMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMS 230

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
            +++ Y+ LIDG  K G ++    + L  L+  ++ + +V++++++ +   GD   A++ 
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKF 290

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
             +MLN G   ++ +Y ++I GLC  G+L EA  +   +    L P ++ ++++++ + K
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFK 350

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFI 455
           SG+++   ++Y  +I+RG +PD V  S +I     NG + +A+ +F      T   N  +
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYF-----CTEKANDVM 405

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +  L+D  C+ +   +  +LF  +    + PD   +T  I G+  QG+L  A  L  +M+
Sbjct: 406 YTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMV 465

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           + GL  D+  Y+ +I+GL     +     +F  M R+GV PD A++++L+    KE N+ 
Sbjct: 466 QEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMT 525

Query: 576 AALKLFGQLTDRGL 589
            A  L   +  RGL
Sbjct: 526 TASDLLLDMQTRGL 539



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 231/490 (47%), Gaps = 18/490 (3%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNG 187
           + E+++  + +        P    + +  L++SN      K    +  +G+  +    N 
Sbjct: 2   VKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNS 61

Query: 188 LL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL-- 241
           ++    + G ++ A  +   + + G  P++++ N ++   C NG I +A  + + L    
Sbjct: 62  VVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASY 121

Query: 242 -VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
               KP++V+F+TL N F K   L++ F    +M++    P+++ YS  ID   K+G LK
Sbjct: 122 GFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDMFCKSGELK 180

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              +         L  +VV F+ ++D Y   GD+   V  Y+ M       NV++Y+ LI
Sbjct: 181 LALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALI 240

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C++G +  A G++ ++L  R+EP+ L Y+++I+GF + G   +       M+ +G++
Sbjct: 241 DGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            D     ++I+GL G     +A        +  L+P++ IF T+M+   +  R    V +
Sbjct: 301 LDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNM 360

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           +  +     +PDV+  + +I GIA  G L  AI  F          + + Y+ +I  L K
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTE-----KANDVMYTVLIDALCK 415

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            ++      +F  +   G+ PD  +Y   +  L K+ NL  A KL  ++   GLE D+  
Sbjct: 416 EEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFA 475

Query: 596 YNTIICGYCS 605
           Y T+I G  S
Sbjct: 476 YTTLIYGLTS 485



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 134/270 (49%), Gaps = 7/270 (2%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           +++ G+ P+  S++ ++  +C+ G++  A  +   +     EP +++Y+SLIDG C++G 
Sbjct: 47  LVSRGYAPHRSSFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106

Query: 404 LRDGFSLYDNMIKR---GLKPDAVVCSLLINGL----MGDALRFFFQSVRMTLIPNLFIF 456
           +R    + +++        KPD V  + L NG     M D +  +   +     PN+  +
Sbjct: 107 IRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTY 166

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           +T +D  C+       +K F  M    + P+V+T T LI G    G L   + L+ +M +
Sbjct: 167 STWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRR 226

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
             ++ +V+TY+A+I G  K   +     M+  M  + V P+  +Y  ++N   +  + D 
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDN 286

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           A+K   ++ ++G+  DI  Y  II G C +
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGI 316



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 22/206 (10%)

Query: 421 PDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V C+  I+ L+       +L+F    V     P+   FN+++   C+L +    V +
Sbjct: 19  PDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSVVSFVCKLGQVKFAVDI 78

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLT--PDVITYSAIIHG 532
              M  +  +PDVI++  LI G    G + SA L+   +    G T  PD+++++ + +G
Sbjct: 79  VHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNG 138

Query: 533 LFKGKNI-SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             K K +  V ++M  +++    +P++  Y+  ++M  K   L  ALK F  +    L P
Sbjct: 139 FSKMKMLDEVFVYMGVMLK--CCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFP 196

Query: 592 DIITYNTIICGYCSLNSCLIDGYFKS 617
           +++T+           +CLIDGY K+
Sbjct: 197 NVVTF-----------TCLIDGYCKA 211


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 234/490 (47%), Gaps = 11/490 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE--- 182
           G+I +++ +   M   G    P +   ++             ++   +  +G C  +   
Sbjct: 136 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG-CALDVGN 194

Query: 183 --FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
              ++N +  +G ++ A H+ R +   G  P++V+ N +LK LC+  + G    L + ++
Sbjct: 195 CNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV 254

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +   PN+VTF+TLI+  C+    E+  ++   M+E    PD+ +Y+ +IDG+ K G L+
Sbjct: 255 RMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLE 314

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
             +E+L      GLK +VV +++++             +    M +     + ++++IL+
Sbjct: 315 VAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILV 374

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              CQ G +     L  Q+L R   P ++TY+++I+GFCK G + +   L  +M   G K
Sbjct: 375 DFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCK 434

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ +  ++++ GL       DA     Q ++     N   FNTL++  C+       ++L
Sbjct: 435 PNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIEL 494

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M +    PD+I+++ +I G+   G    A+ L   M+ +G++P+ I YS+I   L +
Sbjct: 495 LKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSR 554

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              I+  + MF  ++   +  D  +YN +++ L K    + A++    +   G  P+  T
Sbjct: 555 EGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNEST 614

Query: 596 YNTIICGYCS 605
           Y  +I G  S
Sbjct: 615 YTILIRGLAS 624



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 194/431 (45%), Gaps = 16/431 (3%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++ G  R G +E+A  +   V      PN  T   +++ LC  G+I +A ++ D + 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P    +  ++ A C+      A ++   +       D+   +++++ +   G + 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   LL      G + DVV +++V+         G   +  + M+     PN+++++ LI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC+ G       +  Q++     P +  Y+++IDG CK G L     + + M   GLK
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF---------IFNTLMDGCCRLKRATD 471
           P+ V  + L+ GL   A R+        L+  +F          FN L+D  C+      
Sbjct: 330 PNVVCYNTLLKGLC-SAERWEETE---ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDR 385

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++L   M      PDVIT+T +I G   +G +  A++L   M   G  P+ I+Y+ ++ 
Sbjct: 386 VIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL   +       +   M + G   +   +N L+N L K+  ++ A++L  Q+   G  P
Sbjct: 446 GLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 505

Query: 592 DIITYNTIICG 602
           D+I+Y+T+I G
Sbjct: 506 DLISYSTVIDG 516



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 118/262 (45%), Gaps = 39/262 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I  + + G IDE+V +   M+  G   +      ++  L  +        L   M 
Sbjct: 405 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       +  L+N L +KG++E A  + +Q++  G  P++++ + ++  L   G+  
Sbjct: 465 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L +V++  G  PN + +S++ +A  +E ++ K  Q+++ + +  +  D ++Y+ +I
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 584

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K G  +                                   RA++    M++ G +
Sbjct: 585 SSLCKRGETE-----------------------------------RAIEFLAYMVSSGCV 609

Query: 351 PNVISYSILIKGLCQQGRLVEA 372
           PN  +Y+ILI+GL  +G + EA
Sbjct: 610 PNESTYTILIRGLASEGFVKEA 631



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 3/149 (2%)

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G CR  +     +L        + P+  T+  ++R + ++G ++ A+ +  +M 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           +RG  P    Y  I+    +G      + + + +   G A D+   N++LN +  + ++D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            AL L   L   G EPD+++YN ++ G C
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLC 238



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/258 (18%), Positives = 96/258 (37%), Gaps = 36/258 (13%)

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
           GG     +  S LI+ LC  GR  EA      +        ++ Y++++ G+C++G+L  
Sbjct: 52  GGGEGGSVRLSSLIRSLCAAGRTAEA---ARALSAAGGGAGVVAYNAMVAGYCRAGQLES 108

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
              L                                 +  + + PN + +  ++   C  
Sbjct: 109 ARRL---------------------------------AAAVPVPPNAYTYFPVVRALCAR 135

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  D + +   M      P    + V++      G   SA+ +   +  RG   DV   
Sbjct: 136 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC 195

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +++ +    ++   LH+ + +   G  PD+  YN +L  L          +L  ++  
Sbjct: 196 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 255

Query: 587 RGLEPDIITYNTIICGYC 604
               P+I+T+NT+I   C
Sbjct: 256 MACPPNIVTFNTLISYLC 273


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 240/502 (47%), Gaps = 12/502 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+      G+I +++ +   M+  G   +P +    +     ++       + R + 
Sbjct: 114 YFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLH 173

Query: 175 GKGFCVYE-----FLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQ 228
           G+G C  +      ++  +  +G ++ A  + R ++   G  P++V+ N +L+ LC+  +
Sbjct: 174 GRG-CALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARR 232

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            G+   L + ++  G  PN+VTFSTLI   C+    E+  +++  M E    PD+ +Y+ 
Sbjct: 233 WGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYAT 292

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +IDG+ K  RL+    +L      GL  +VV +++++           A      M +  
Sbjct: 293 IIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKD 352

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              + ++++IL+  LCQ G +     +  Q+L     P ++TY+++I+GFCK G + +  
Sbjct: 353 CPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 412

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L  +M   G +P+ V  ++++ GL       DA     Q ++    PN   FNTL++  
Sbjct: 413 MLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFL 472

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+       ++L   M +    PD+I+++ +I G+   G+   A+ L   M+K+G++P+ 
Sbjct: 473 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNT 532

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           I YS+I   L     I+  + MF+ ++   V  D  +YN +++ L K    D A++    
Sbjct: 533 IIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAY 592

Query: 584 LTDRGLEPDIITYNTIICGYCS 605
           +   G  P+  TY  +I G  S
Sbjct: 593 MVSSGCVPNESTYTILIRGLAS 614



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/505 (24%), Positives = 221/505 (43%), Gaps = 66/505 (13%)

Query: 89  KMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           + V   G      RL RD L  FGC+                                PD
Sbjct: 189 QAVCDQGPVDEAVRLLRDLLPSFGCE--------------------------------PD 216

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           +V               Y  + R     G C+         R G +++   +  +++  G
Sbjct: 217 VV--------------SYNAVLR-----GLCMAR-------RWGHVQD---LMEEMVAAG 247

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PNIVT + ++  LC NG       +   +   G  P+V  ++T+I+  CKE +LE A 
Sbjct: 248 CPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVAR 307

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            + N M    L P+++ Y+ L+ GL  A R +E   LL    D+   LD V F+ ++D  
Sbjct: 308 GILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFL 367

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G V R ++  ++ML  G +P+VI+Y+ +I G C++G + EA  L   +      P+ 
Sbjct: 368 CQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNT 427

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQ 443
           ++Y+ ++ G C + +  D   L   MI++G  P+ V  + LIN     GL+  A+    Q
Sbjct: 428 VSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 487

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            +     P+L  ++T++DG  +     + ++L  +M    + P+ I ++ +   ++ +G 
Sbjct: 488 MLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGR 547

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           ++  I +F  +    +  D + Y+A+I  L K       +     M  +G  P+ + Y +
Sbjct: 548 INKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTI 607

Query: 564 LLNMLIKECNLDAALKLFGQLTDRG 588
           L+  L  E  +  A ++  +L  +G
Sbjct: 608 LIRGLASEGFVKEAQEILTELCSKG 632



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/431 (22%), Positives = 203/431 (47%), Gaps = 41/431 (9%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG--PKP--------------------- 246
            PN  T   +++ LC  G+I +A ++ D +   G  P P                     
Sbjct: 108 APNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167

Query: 247 ------------NVVTFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILIDGL 293
                       +V   + ++ A C +  +++A + L +L+      PD++ Y+ ++ GL
Sbjct: 168 VLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGL 227

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
             A R     +L+   +  G   ++V FS+++      G   R  + + +M   G  P+V
Sbjct: 228 CMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDV 287

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
             Y+ +I G+C++ RL  A G+  ++    L P+++ Y++L+ G C + +  +   L   
Sbjct: 288 RMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAE 347

Query: 414 MIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M  +    D V  ++L+     NGL+   +    Q +    +P++  + T+++G C+   
Sbjct: 348 MFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGL 407

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             + V L   M     +P+ +++T++++G+ S      A  L  QM+++G  P+ +T++ 
Sbjct: 408 IDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNT 467

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+ L K   +   + + K M  NG +PD+  Y+ +++ L K  N D AL+L   +  +G
Sbjct: 468 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKG 527

Query: 589 LEPDIITYNTI 599
           + P+ I Y++I
Sbjct: 528 MSPNTIIYSSI 538



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 166/361 (45%), Gaps = 6/361 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PN  T+  L+ A C   ++  A  + + M      P   +Y + ++   +A   +    +
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-GFLPNVISYSILIKGLC 364
           L     RG  LDV   + V+ A    G V  AV+    +L   G  P+V+SY+ +++GLC
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
              R      L  +++     P+++T+S+LI   C++G       ++  M + G  PD  
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288

Query: 425 VCSLLINGLMGDALRFFFQSV--RMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           + + +I+G+  +      + +  RM    L PN+  +NTL+ G C   R  +   L   M
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              +   D +T  +L+  +   G +   I +  QML+ G  PDVITY+ +I+G  K   I
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLI 408

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              + + + M   G  P+   Y ++L  L        A +L  Q+  +G  P+ +T+NT+
Sbjct: 409 DEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTL 468

Query: 600 I 600
           I
Sbjct: 469 I 469



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 41/295 (13%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN  +Y  L++ LC +GR+ +A  +   +  R   P+   Y   ++  C++   R    +
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 411 YDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSV-RMTLIPNLFIFNTLMDGCC 464
             ++  RG   D   C+L++      G + +A+R     +      P++  +N ++ G C
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
             +R      L   M      P+++T + LI  +   G       +  QM + G  PDV 
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL-----------------NM 567
            Y+ II G+ K + + V   +   M   G++P++  YN LL                  M
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348

Query: 568 LIKECNL------------------DAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             K+C L                  D  +++  Q+ + G  PD+ITY T+I G+C
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFC 403



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/364 (20%), Positives = 150/364 (41%), Gaps = 75/364 (20%)

Query: 18  CYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQS 77
           CY +  K   S  ++ +A  +LA +   + P   + F           NI  L+  L Q+
Sbjct: 324 CYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTF-----------NI--LVDFLCQN 370

Query: 78  DMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESV 132
            + D    V ++M+                  + GC      Y+ +I  + + G IDE+V
Sbjct: 371 GLVDRVIEVLEQML------------------EHGCMPDVITYTTVINGFCKEGLIDEAV 412

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGL 188
            +   M+  G   +      ++  L  +       +L   M  +G       +  L+N L
Sbjct: 413 MLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFL 472

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
            +KG++E A  + +Q++  G  P++++ + ++  L   G    A  L +V++  G  PN 
Sbjct: 473 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNT 532

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           + +S++ +A   E ++ K  Q++  + +  +  D ++Y+ +I  L K             
Sbjct: 533 IIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKR------------ 580

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
                                  G+  RA++    M++ G +PN  +Y+ILI+GL  +G 
Sbjct: 581 -----------------------GETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGF 617

Query: 369 LVEA 372
           + EA
Sbjct: 618 VKEA 621


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 209/425 (49%), Gaps = 39/425 (9%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           +++A  +  +++++   P     NKIL  L  +       SL   +   G KPN+   + 
Sbjct: 67  VDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNI 126

Query: 254 LINAFCK----EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           LI  FC+      ++ +AF  ++ ++ +    D + Y  LI GL K G  +   +LL   
Sbjct: 127 LIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRV 186

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
             + ++L+ V++++V+        V  A   Y  M++ G  PNV++YS LI G    G+L
Sbjct: 187 DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKL 246

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  LF ++++  ++P   T++ L+DGFCK  K+++G +++  M+K+G+ PD V     
Sbjct: 247 KDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT---- 302

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
                                     +N+LMDG C +K       +F  M    + PD+ 
Sbjct: 303 --------------------------YNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIR 336

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           ++ +LI G      +  A+ LF +M  + + P+V+TY+++I GL K   IS  L +   M
Sbjct: 337 SYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM 396

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
              GV P+I  YN +++ L K   +D A+ L  +  D+G++P + TY  +I G C     
Sbjct: 397 HDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK---- 452

Query: 610 LIDGY 614
            ++GY
Sbjct: 453 -VEGY 456



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 192/386 (49%), Gaps = 20/386 (5%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++GL + G    A  + ++V  +    N V  N ++  +C +  + +A  L+  ++
Sbjct: 163 YGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMV 222

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  PNVVT+S LI+ F    KL+ A  L+N ++  ++ PD   ++IL+DG  K  ++K
Sbjct: 223 SKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMK 282

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           EG  +    + +G+  DVV ++S+MD Y  + +V  A   ++ M  GG  P++ SY+ILI
Sbjct: 283 EGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 342

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+  ++ +A  LF ++  + + P+++TY+SLIDG  KSG++     L D M  RG+ 
Sbjct: 343 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVP 402

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ +  + +I+ L     +  A+    +     + P+++ +  L+DG C+++    TV  
Sbjct: 403 PNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVN- 461

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
                         T+ V+I G   +G    A+ L  +M      P+ +TY   I  L  
Sbjct: 462 --------------TYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLD 507

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIY 561
                    +F+ M   G+    A Y
Sbjct: 508 NNENDKAEKLFREMITRGLLNRSASY 533



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/515 (23%), Positives = 245/515 (47%), Gaps = 56/515 (10%)

Query: 19  YCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSD 78
           Y S S T  S+   + A ++   L++ N   PA +F K   + V S +   ++ +  + +
Sbjct: 54  YSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKME 113

Query: 79  MRDVASHVFDKMVI-----QFG----KTYNFFRLFRDSLGDFG-----CDYSFLIENYVR 124
            R +  ++F+  ++     Q G    + +  F LF D L   G       Y  LI    +
Sbjct: 114 FRGIKPNLFNCNILIYCFCQLGLIPCQIHQAF-LFHDKLVALGFHLDQVSYGTLIHGLCK 172

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFL 184
           +G+   ++               DL+QR+   LV  N+V                +Y  +
Sbjct: 173 VGETRAAL---------------DLLQRVDGKLVQLNAV----------------MYNTV 201

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           + G+ +   + +AF ++ +++ +G  PN+VT + ++    + G++ +A  LF+ ++L   
Sbjct: 202 IYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENI 261

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           KP+  TF+ L++ FCK+ K+++   ++ +MM+  ++PD++ Y+ L+DG      +     
Sbjct: 262 KPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKS 321

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +  T    G+  D+  ++ +++ +  I  V +A+  ++ M     +PNV++Y+ LI GL 
Sbjct: 322 IFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLS 381

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + GR+  A  L  Q+  R + P++LTY+S+ID   K+ ++    +L      +G++P   
Sbjct: 382 KSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMY 441

Query: 425 VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
             ++LI+GL         +   +T    +  +N ++ G C+     + + L   M   + 
Sbjct: 442 TYTILIDGLCK------VEGYDIT----VNTYNVMIHGFCKKGLFDEALSLLSKMKDSSC 491

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
            P+ +T+ + IR +        A  LF +M+ RGL
Sbjct: 492 IPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 526



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 175/401 (43%), Gaps = 83/401 (20%)

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           +VPD    S  +   F++ +  +    L++ L    K++ + +SS    +    DV  AV
Sbjct: 16  VVPD----SHFVPKKFQSFQFLKNTHFLISFLILLTKINFISYSSTSTTFHSNNDVDDAV 71

Query: 339 QTYDRMLNG-----------------------------------GFLPNVISYSILIKGL 363
             ++R+L                                     G  PN+ + +ILI   
Sbjct: 72  SLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCF 131

Query: 364 CQQGRL---VEACGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKLR-------------- 405
           CQ G +   +    LF   L+        ++Y +LI G CK G+ R              
Sbjct: 132 CQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLV 191

Query: 406 ---------------------DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
                                D F LY  M+ +G+ P+ V  S LI+G      + DA+ 
Sbjct: 192 QLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAID 251

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            F + +   + P+ + FN L+DG C+ ++  +   +F +M    I PDV+T+  L+ G  
Sbjct: 252 LFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYC 311

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
               +++A  +F  M + G+ PD+ +Y+ +I+G  K K +   +++F  M    + P++ 
Sbjct: 312 LVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVV 371

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            YN L++ L K   +  AL+L  Q+ DRG+ P+I+TYN+II
Sbjct: 372 TYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSII 412


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 237/492 (48%), Gaps = 41/492 (8%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRG 175
           +I+   ++ ++D++  I   M D GI  +PDL     ++  L  S ++ +  ++   M  
Sbjct: 175 IIKELCKMKEMDKAESIVQKMVDSGI--APDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 232

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            G       Y  L++G    G+   +  + +Q+   G +P +  CN  +  L  +G+   
Sbjct: 233 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 292

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCK--EAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           A  +FD ++L GPKP+++++ST+++ +    ++ L     ++NLM+   + P+  +++IL
Sbjct: 293 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 352

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I+   + G + +   +     ++G+  D V F++V+ +   IG +  A+  ++ M++ G 
Sbjct: 353 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 412

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY-SSLIDGFCKSGKLRDGF 408
            P+   Y  LI+G C  G LV+A  L  +++ + + P  + Y SS+I+  CK G++ +G 
Sbjct: 413 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 472

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            + D M++ G +P                              N+  FN+LM+G C +  
Sbjct: 473 DIMDMMVQTGQRP------------------------------NVVTFNSLMEGYCLVGN 502

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   L   M    I+P+   +  L+ G    G +  A+ +F  ML +G+ P  + YS 
Sbjct: 503 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 562

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           I+HGLF+ +  +    MF  M  +G    I  Y V+L  L +    D A  L  +L    
Sbjct: 563 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 622

Query: 589 LEPDIITYNTII 600
           ++ DIIT+N +I
Sbjct: 623 VKFDIITFNIVI 634



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 247/525 (47%), Gaps = 35/525 (6%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           +I  L +S   D A  V ++MV + G   N               Y+ LI  Y   G  +
Sbjct: 210 IIDGLCKSKAMDKAERVLEQMV-EAGTRPNSIT------------YNSLIHGYSISGMWN 256

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLM 185
           ESV +F  MS  G+  + D     +  L       +   +  +M  KG       Y  ++
Sbjct: 257 ESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 316

Query: 186 NGLLRK-----GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +G           + N F++   ++ +G  PN    N ++      G +  A  +F+ + 
Sbjct: 317 HGYATATDSCLADVHNIFNL---MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ 373

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+ VTF+T+I++ C+  +L+ A   +N M+++ + P   +Y  LI G    G L 
Sbjct: 374 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELV 433

Query: 301 EGNELLLTALDRGLKLD-VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +  EL+   +++ +    V  FSS+++     G V       D M+  G  PNV++++ L
Sbjct: 434 KAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSL 493

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           ++G C  G + EA  L   +    +EP+   Y +L+DG+CK+G++ D  +++ +M+ +G+
Sbjct: 494 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV 553

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KP +V+ S++++GL        A + F + +      ++  +  ++ G CR    TD   
Sbjct: 554 KPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCR-NNCTDEAN 612

Query: 475 LFM--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           + +  L  M N+K D+IT  ++I  +   G    A  LF  +   GL P++ TYS +I  
Sbjct: 613 MLLEKLFAM-NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 671

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           L K ++     ++F  +E++G A D  + N ++ ML+ +  +  A
Sbjct: 672 LIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 716



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 199/387 (51%), Gaps = 8/387 (2%)

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           +G++  A  LF  ++  G  P ++  +++I   CK  +++KA  +   M++  + PDL  
Sbjct: 147 DGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFT 206

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           YS++IDGL K+  + +   +L   ++ G + + + ++S++  Y   G    +V+ + +M 
Sbjct: 207 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 266

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK-- 403
           + G +P V + +  I  L + GR  EA  +F  ++++  +P +++YS+++ G+  +    
Sbjct: 267 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 326

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNT 458
           L D  ++++ M+ +G+ P+  V ++LIN     G+M  A+  F       +IP+   F T
Sbjct: 327 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 386

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++   CR+ R  D +  F  M    + P    +  LI+G  + G L  A  L  +M+ + 
Sbjct: 387 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 446

Query: 519 LTPDVITY-SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           + P  + Y S+II+ L K   ++ G  +  +M + G  P++  +N L+       N++ A
Sbjct: 447 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 506

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
             L   +   G+EP+   Y T++ GYC
Sbjct: 507 FALLDAMASIGIEPNCYIYGTLVDGYC 533



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/469 (23%), Positives = 214/469 (45%), Gaps = 44/469 (9%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+ G ++ G ++ A  +  +++++G +P I+ CN I+K LC   ++  A S+   ++  G
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG----------- 292
             P++ T+S +I+  CK   ++KA ++   M+E    P+ I Y+ LI G           
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 259

Query: 293 ------------------------LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
                                   LFK GR  E   +  + + +G K D++ +S+++  Y
Sbjct: 260 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 319

Query: 329 VGIGD--VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               D  +      ++ ML  G  PN   ++ILI    + G + +A  +F  +  + + P
Sbjct: 320 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 379

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
             +T++++I   C+ G+L D    +++M+  G+ P   V   LI G          + + 
Sbjct: 380 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 439

Query: 447 MTLI------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             ++      P +  F+++++  C+  R  +   +  +M     +P+V+T   L+ G   
Sbjct: 440 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 499

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G++  A  L   M   G+ P+   Y  ++ G  K   I   L +F+ M   GV P   +
Sbjct: 500 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 559

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           Y+++L+ L +     AA K+F ++ + G    I TY  ++ G C  N+C
Sbjct: 560 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCR-NNC 607



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 121/236 (51%), Gaps = 5/236 (2%)

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI----NGLMGDA 437
           R   P++ TY+ LID + +  +   G ++   ++K GL PD    SL+     +G +  A
Sbjct: 94  RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 153

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
              F + +   ++P + I N+++   C++K       +   M    I PD+ T++++I G
Sbjct: 154 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 213

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +    ++  A  +  QM++ G  P+ ITY+++IHG       +  + +FK M   GV P 
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 273

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS-LNSCLID 612
           +   N  ++ L K    + A  +F  +  +G +PDII+Y+T++ GY +  +SCL D
Sbjct: 274 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 329



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/308 (20%), Positives = 137/308 (44%), Gaps = 29/308 (9%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +A  +++ ++  + P P +++F    N     N+ +   V    D+ D        M++Q
Sbjct: 434 KAKELISEMMNKDIPPPGVKYFSSIIN-----NLCKEGRVAEGKDIMD--------MMVQ 480

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
            G+  N               ++ L+E Y  +G ++E+  +   M+ +GI  +  +   L
Sbjct: 481 TGQRPNVVT------------FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 528

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +     +  +     + R M  KG      +Y  +++GL +      A  M  ++I+ G 
Sbjct: 529 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 588

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
             +I T   +L  LC N     A+ L + L  +  K +++TF+ +I+A  K  + ++A +
Sbjct: 589 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 648

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L++ +    LVP++  YS++I  L K    +E + L ++    G   D  + + ++   +
Sbjct: 649 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLL 708

Query: 330 GIGDVGRA 337
              +V +A
Sbjct: 709 NKAEVAKA 716


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/590 (24%), Positives = 275/590 (46%), Gaps = 39/590 (6%)

Query: 51  AIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNF-----FRLFR 105
           A+ F  ++H+  +      +IHVL  + ++ +   +F + +I + K  N      F    
Sbjct: 111 AVSFHGFSHSIYA---FKIIIHVLASAGLQ-MEVQIFLRDIISYYKEVNLDVSELFSTLL 166

Query: 106 DSLGDFGCDYSFLIEN-----YVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           DS  D     S ++ N     +     + ++ ++F      G+ L+      L++C  ++
Sbjct: 167 DSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEA 226

Query: 161 NSVGQYYKLCRAMRGKG----FCVYEFLMN----GLLRKGV-IENAFHMHRQVIQRGFVP 211
           N       L   ++  G       Y  +MN    G   K + I  A  +  ++   G  P
Sbjct: 227 NQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESP 286

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
            +VT    +  LC  G +  A  L   L +     N   ++ +I+ FC+  +L +AF+L 
Sbjct: 287 TVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELL 346

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M    + P    YSILIDGL K G++++  +L+   +   +K  +V +SS+ D     
Sbjct: 347 EDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKS 406

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G    ++  +  +   G+  +VISY+ LI G   Q  +  AC L  ++ +    P+  T+
Sbjct: 407 GLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTF 466

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVR 446
           + LI GFCK  +L     ++  M+K G++ +   C+++ +     G   +AL+   +   
Sbjct: 467 NRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQD 526

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
           + ++PN + +N ++   C+ ++     ++  +M   N+ P  I +  LI G A Q + + 
Sbjct: 527 LGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTK 586

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A+LL+ +MLK G+ P ++TY+ +I+       +    ++FK M + G+ PD  I+  ++ 
Sbjct: 587 ALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIA 646

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
              K  ++ +A  L+ +++  G  P+++TY           +CLIDGYFK
Sbjct: 647 GFCKVGDMKSAWALYEEMSQWGKSPNVVTY-----------TCLIDGYFK 685



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 216/432 (50%), Gaps = 5/432 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y   ++GL R G +E A  + R +  R    N    N ++   C NG++  A  L + +
Sbjct: 290 TYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDM 349

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P   ++S LI+  CK+ ++EKA  L   M++ ++ P L+ YS L DGL K+G  
Sbjct: 350 RSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLT 409

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +    +       G K DV+ ++++++ +V   D+G A +    M   G +PN  +++ L
Sbjct: 410 EISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRL 469

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C++ RL +A  +F  +L   ++ ++ T + + D F + G   +   L + +   G+
Sbjct: 470 IHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGI 529

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P++   +++I  L  +     A       ++  + P    +NTL+DG  +    T  + 
Sbjct: 530 VPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALL 589

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L+  M    I P ++T+T+LI   +++  +  A  LF +M+K+GL PD I ++ II G  
Sbjct: 590 LYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFC 649

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  ++     +++ M + G +P++  Y  L++   K   +D A  LF ++    + PD +
Sbjct: 650 KVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGL 709

Query: 595 TYNTIICGYCSL 606
           TY  +I GY SL
Sbjct: 710 TYTALIFGYQSL 721



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 202/409 (49%), Gaps = 9/409 (2%)

Query: 165 QYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           + ++L   MR  G       Y  L++GL +KG +E A  +  +++Q    P++VT + + 
Sbjct: 341 EAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLF 400

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC +G    + S+F  L   G K +V++++TLIN F  +  +  A +L + M     V
Sbjct: 401 DGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSV 460

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P+   ++ LI G  K  RL +  E+    L  G++L++   + + D +   G    A++ 
Sbjct: 461 PNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKL 520

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
            + + + G +PN  +Y+I+IK LC++ +  +A  +   +L   + P  + Y++LIDG+ K
Sbjct: 521 INEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAK 580

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFI 455
                    LY  M+K G+ P  V  ++LIN       M +A   F + ++  L+P+  I
Sbjct: 581 QSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEII 640

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           F  ++ G C++        L+  M  +   P+V+T+T LI G      +  A  LF +M 
Sbjct: 641 FTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMK 700

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           +  +TPD +TY+A+I G            MF  M+ NGV P+   Y  L
Sbjct: 701 RDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/457 (22%), Positives = 211/457 (46%), Gaps = 41/457 (8%)

Query: 84  SHVFDKMVIQF---GKTYNFFRLFRD----SLGDFGCDYSFLIENYVRIGKIDESVEIFA 136
           S+ ++ ++ +F   G+ +  F L  D     +      YS LI+   + G++++++++  
Sbjct: 323 SYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIE 382

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSN----SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKG 192
            M    +  S      L   L  S     S+  ++ L           Y  L+NG + + 
Sbjct: 383 EMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQR 442

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            + +A  +  ++   G VPN  T N+++   C   ++  A  +F ++L VG + N+ T +
Sbjct: 443 DMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCN 502

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
            + + F +E    +A +L N + ++ +VP+   Y+I+I  L K  + ++  E+L   L  
Sbjct: 503 IMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKN 562

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            +    + +++++D Y    +  +A+  Y +ML  G  P++++Y++LI     + ++ EA
Sbjct: 563 NVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEA 622

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             LF +++ + L P  + ++ +I GFCK G ++  ++LY+ M + G  P+ V        
Sbjct: 623 YYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVT------- 675

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
                                  +  L+DG  ++KR      LF  M   N+ PD +T+T
Sbjct: 676 -----------------------YTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYT 712

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            LI G  S G       +F +M + G+ P+   Y+ +
Sbjct: 713 ALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 242/494 (48%), Gaps = 46/494 (9%)

Query: 107 SLGDFGCD-----YSFLIENYVRIGKI-DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           S+  FGC+     Y+ LI+ + R G I   S+ + +  +  G    PD+V          
Sbjct: 81  SMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVS--------- 131

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
                               +  L NG  +  +++  F ++  V+ +   PN+VT +  +
Sbjct: 132 --------------------FNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWI 170

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
              C +G++  A   F  +      PNVVTF+ LI+ +CK   LE A  LY  M  + + 
Sbjct: 171 DTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS 230

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
            +++ Y+ LIDG  K G ++   E+    ++  ++ + +V+++++D +   GD   A++ 
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKF 290

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
             +MLN G   ++ +Y ++I GLC  G+L EA  +   +    L P ++ ++++++ + K
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 350

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFI 455
           SG+++   ++Y  +I+RG +PD V  S +I     NG + +A+ +F          N  +
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----CIEKANDVM 405

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +  L+D  C+     +  +LF  +    + PD   +T  I G+  QG+L  A  L  +M+
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           + GL  D++ Y+ +I+GL     +     +F  M  +G++PD A++++L+    KE N+ 
Sbjct: 466 QEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMA 525

Query: 576 AALKLFGQLTDRGL 589
           AA  L   +  RGL
Sbjct: 526 AASDLLLDMQRRGL 539



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 225/422 (53%), Gaps = 21/422 (4%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           ++ RG+ P+  + N ++  +C  GQ+  A  +   +   G +P+V+++++LI+  C+   
Sbjct: 47  LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106

Query: 264 LEKA-FQLYNLMMEMDLV--PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
           +  A   L +L      +  PD++ ++ L +G  K   L E   + +  + +    +VV 
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVT 165

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           +S+ +D +   G++  A++++  M      PNV++++ LI G C+ G L  A  L+ ++ 
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD-- 436
             R+  +++TY++LIDGFCK G+++    +Y  M++  ++P+++V + +I+G    GD  
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285

Query: 437 -ALRFFFQSVRMTLIPNLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVITHT 492
            A++F  + +   +  ++  +  ++ G C   +LK AT+ V+    M   ++ PD++  T
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE---DMEKSDLVPDMVIFT 342

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            ++      G + +A+ ++ ++++RG  PDV+  S +I G+ K   +   +  F + + N
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAN 402

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
            V     +Y VL++ L KE +     +LF ++++ GL PD   Y + I G C   + L+D
Sbjct: 403 DV-----MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN-LVD 456

Query: 613 GY 614
            +
Sbjct: 457 AF 458



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 206/434 (47%), Gaps = 39/434 (8%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP---KPNVVTFSTLINAFCKEAKL 264
           G  P++++ N ++   C NG I +AS + + L        KP++V+F++L N F K   L
Sbjct: 86  GCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKML 145

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           ++ F    +M++    P+++ YS  ID   K+G L+   +   +     L  +VV F+ +
Sbjct: 146 DEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D Y   GD+  AV  Y  M       NV++Y+ LI G C++G +  A  ++ +++  R+
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALR 439
           EP+ L Y+++IDGF + G   +       M+ +G++ D     ++I+GL G     +A  
Sbjct: 265 EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATE 324

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                 +  L+P++ IF T+M+   +  R    V ++  +     +PDV+  + +I GIA
Sbjct: 325 IVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIA 384

Query: 500 SQGSLSSAIL------------------------------LFFQMLKRGLTPDVITYSAI 529
             G L  AI+                              LF ++ + GL PD   Y++ 
Sbjct: 385 KNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW 444

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I GL K  N+     +   M + G+  D+  Y  L+  L  +  +  A ++F ++ + G+
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI 504

Query: 590 EPDIITYNTIICGY 603
            PD   ++ +I  Y
Sbjct: 505 SPDSAVFDLLIRAY 518



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 200/415 (48%), Gaps = 38/415 (9%)

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV-GPKPNVVTF 251
           ++  A     ++ +   +P+  TCNK + +L IN   G  S  F   L+  G  P+  +F
Sbjct: 1   MVREALQFLSRLRKSSNLPDPFTCNKHIHQL-INSNCGILSLKFLAYLVSRGYTPHRSSF 59

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           +++++  CK  +++ A  + + M      PD+I Y+ LIDG  + G ++  + L+L +L 
Sbjct: 60  NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS-LVLESLR 118

Query: 312 RG----LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
                  K D+V F+S+ + +  +  +   V  Y  ++     PNV++YS  I   C+ G
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVTYSTWIDTFCKSG 177

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
            L  A   F  +    L P+++T++ LIDG+CK+G L    SLY  M             
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM------------- 224

Query: 428 LLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                          + VRM+L  N+  +  L+DG C+        +++  M    ++P+
Sbjct: 225 ---------------RRVRMSL--NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            + +T +I G   +G   +A+    +ML +G+  D+  Y  II GL     +     + +
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            ME++ + PD+ I+  ++N   K   + AA+ ++ +L +RG EPD++  +T+I G
Sbjct: 328 DMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG 382



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 138/278 (49%), Gaps = 9/278 (3%)

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           V  A+Q   R+     LP+  + +  I  L      + +      ++ R   P   +++S
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD--ALRFFFQSVRMT- 448
           ++   CK G+++    +  +M + G +PD +  + LI+G    GD  +     +S+R + 
Sbjct: 62  VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121

Query: 449 ---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
                P++  FN+L +G  ++K   D V ++M + +    P+V+T++  I      G L 
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMK-MLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+  F  M +  L+P+V+T++ +I G  K  ++ V + ++K M R  ++ ++  Y  L+
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           +   K+  +  A +++ ++ +  +EP+ + Y TII G+
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 22/223 (9%)

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNT 458
           +R+       + K    PD   C+  I+ L+       +L+F    V     P+   FN+
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-LKR 517
           ++   C+L +      +   M  +  +PDVI++  LI G    G + SA L+   +    
Sbjct: 62  VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121

Query: 518 GL--TPDVITYSAIIHGLFKGKNI-SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           G    PD+++++++ +G  K K +  V ++M  +++    +P++  Y+  ++   K   L
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK--CCSPNVVTYSTWIDTFCKSGEL 179

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
             ALK F  +    L P+++T+           +CLIDGY K+
Sbjct: 180 QLALKSFHSMKRDALSPNVVTF-----------TCLIDGYCKA 211


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/564 (24%), Positives = 260/564 (46%), Gaps = 106/564 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++  I  + + GK++E+V++F+ M + G+  +P++V                        
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGV--APNVV------------------------ 309

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 +  +++GL   G  + AF    ++++RG  P ++T + ++K L    +IG+A  
Sbjct: 310 -----TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF 364

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +   G  PNV+ ++ LI++F +   L KA ++ +LM+   L      Y+ LI G  
Sbjct: 365 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 424

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVM---------DA---YVGI----------- 331
           K G+      LL   L  G  ++   F+SV+         D+   +VG            
Sbjct: 425 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 484

Query: 332 ------------GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
                       G   +A++ + + LN GF+ +  + + L+ GLC+ G+L EA  +  ++
Sbjct: 485 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 544

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG---- 435
           L R      ++Y++LI G C   KL + F   D M+KRGLKPD    S+LI GL      
Sbjct: 545 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 604

Query: 436 -DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++F+    R  ++P+++ ++ ++DGCC+ +R  +  + F  M   N++P+ + +  L
Sbjct: 605 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 664

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           IR     G LS A+ L   M  +G++P+  TY+++I G+     +     +F+ M   G+
Sbjct: 665 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 724

Query: 555 APDIAIYNVLLN-------MLIKEC----------------------------NLDAALK 579
            P++  Y  L++       M+  EC                            N+  A +
Sbjct: 725 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 784

Query: 580 LFGQLTDRGLEPDIITYNTIICGY 603
           L  ++ ++G+ PD ITY   I GY
Sbjct: 785 LLNEMREKGIVPDSITYKEFIYGY 808



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 235/500 (47%), Gaps = 17/500 (3%)

Query: 117 FLIENYVRIGKIDE---SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
            LIE Y    K D    ++++F  +++ G++ S      L++ LV +N   ++ K C A 
Sbjct: 206 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRAN---EFQKCCEAF 262

Query: 174 ----RGKGFCVYEFL--MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
               +G    VY F   +N   + G +E A  +  ++ + G  PN+VT N ++  L + G
Sbjct: 263 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 322

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A    + ++  G +P ++T+S L+    +  ++  A+ +   M +    P++I+Y+
Sbjct: 323 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 382

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LID   +AG L +  E+    + +GL L    +++++  Y   G    A +    ML+ 
Sbjct: 383 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 442

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GF  N  S++ +I  LC       A    G++L+R + P     ++LI G CK GK    
Sbjct: 443 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 502

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+   + +G   D    + L++GL     + +A R   + +    + +   +NTL+ G
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           CC  K+  +       M    +KPD  T+++LI G+ +   +  AI  +    + G+ PD
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TYS +I G  K +    G   F  M    V P+  +YN L+    +   L  AL+L  
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682

Query: 583 QLTDRGLEPDIITYNTIICG 602
            +  +G+ P+  TY ++I G
Sbjct: 683 DMKHKGISPNSATYTSLIKG 702



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 191/384 (49%), Gaps = 12/384 (3%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  +F VL   G  P+  T + L+ +  +  + +K  + ++++ +  + PD+ +++  I+
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 281

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY---DRMLNGG 348
              K G+++E  +L     + G+  +VV F++V+D   G+G  GR  + +   ++M+  G
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID---GLGMCGRYDEAFMFKEKMVERG 338

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P +I+YSIL+KGL +  R+ +A  +  ++  +   P+++ Y++LID F ++G L    
Sbjct: 339 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 398

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            + D M+ +GL   +   + LI     NG   +A R   + + +    N   F +++   
Sbjct: 399 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 458

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C        ++    M + N+ P     T LI G+   G  S A+ L+FQ L +G   D 
Sbjct: 459 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 518

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            T +A++HGL +   +     + K +   G   D   YN L++    +  LD A     +
Sbjct: 519 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 578

Query: 584 LTDRGLEPDIITYNTIICGYCSLN 607
           +  RGL+PD  TY+ +ICG  ++N
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMN 602



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 104/235 (44%), Gaps = 8/235 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM----SCLVDSNSVGQYY--K 168
           YS LI     + K++E+++ +      G+   PD+    +     C  +    GQ +  +
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGML--PDVYTYSVMIDGCCKAERTEEGQEFFDE 648

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +          VY  L+    R G +  A  +   +  +G  PN  T   ++K + I  +
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 708

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  LF+ + + G +PNV  ++ LI+ + K  ++ K   L   M   ++ P+ I Y++
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           +I G  + G + E + LL    ++G+  D + +   +  Y+  G V  A +  D 
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/564 (24%), Positives = 260/564 (46%), Gaps = 106/564 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++  I  + + GK++E+V++F+ M + G+  +P++V                        
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGV--APNVV------------------------ 296

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 +  +++GL   G  + AF    ++++RG  P ++T + ++K L    +IG+A  
Sbjct: 297 -----TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF 351

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +   G  PNV+ ++ LI++F +   L KA ++ +LM+   L      Y+ LI G  
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 411

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVM---------DA---YVGI----------- 331
           K G+      LL   L  G  ++   F+SV+         D+   +VG            
Sbjct: 412 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471

Query: 332 ------------GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
                       G   +A++ + + LN GF+ +  + + L+ GLC+ G+L EA  +  ++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG---- 435
           L R      ++Y++LI G C   KL + F   D M+KRGLKPD    S+LI GL      
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591

Query: 436 -DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++F+    R  ++P+++ ++ ++DGCC+ +R  +  + F  M   N++P+ + +  L
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           IR     G LS A+ L   M  +G++P+  TY+++I G+     +     +F+ M   G+
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711

Query: 555 APDIAIYNVLLN-------MLIKEC----------------------------NLDAALK 579
            P++  Y  L++       M+  EC                            N+  A +
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771

Query: 580 LFGQLTDRGLEPDIITYNTIICGY 603
           L  ++ ++G+ PD ITY   I GY
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGY 795



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 235/500 (47%), Gaps = 17/500 (3%)

Query: 117 FLIENYVRIGKIDE---SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
            LIE Y    K D    ++++F  +++ G++ S      L++ LV +N   ++ K C A 
Sbjct: 193 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRAN---EFQKCCEAF 249

Query: 174 ----RGKGFCVYEFL--MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
               +G    VY F   +N   + G +E A  +  ++ + G  PN+VT N ++  L + G
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A    + ++  G +P ++T+S L+    +  ++  A+ +   M +    P++I+Y+
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LID   +AG L +  E+    + +GL L    +++++  Y   G    A +    ML+ 
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GF  N  S++ +I  LC       A    G++L+R + P     ++LI G CK GK    
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+   + +G   D    + L++GL     + +A R   + +    + +   +NTL+ G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           CC  K+  +       M    +KPD  T+++LI G+ +   +  AI  +    + G+ PD
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TYS +I G  K +    G   F  M    V P+  +YN L+    +   L  AL+L  
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669

Query: 583 QLTDRGLEPDIITYNTIICG 602
            +  +G+ P+  TY ++I G
Sbjct: 670 DMKHKGISPNSATYTSLIKG 689



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 191/384 (49%), Gaps = 12/384 (3%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  +F VL   G  P+  T + L+ +  +  + +K  + ++++ +  + PD+ +++  I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY---DRMLNGG 348
              K G+++E  +L     + G+  +VV F++V+D   G+G  GR  + +   ++M+  G
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID---GLGMCGRYDEAFMFKEKMVERG 325

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P +I+YSIL+KGL +  R+ +A  +  ++  +   P+++ Y++LID F ++G L    
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            + D M+ +GL   +   + LI     NG   +A R   + + +    N   F +++   
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C        ++    M + N+ P     T LI G+   G  S A+ L+FQ L +G   D 
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            T +A++HGL +   +     + K +   G   D   YN L++    +  LD A     +
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565

Query: 584 LTDRGLEPDIITYNTIICGYCSLN 607
           +  RGL+PD  TY+ +ICG  ++N
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMN 589



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 104/235 (44%), Gaps = 8/235 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM----SCLVDSNSVGQYY--K 168
           YS LI     + K++E+++ +      G+   PD+    +     C  +    GQ +  +
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGML--PDVYTYSVMIDGCCKAERTEEGQEFFDE 635

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +          VY  L+    R G +  A  +   +  +G  PN  T   ++K + I  +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  LF+ + + G +PNV  ++ LI+ + K  ++ K   L   M   ++ P+ I Y++
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           +I G  + G + E + LL    ++G+  D + +   +  Y+  G V  A +  D 
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 255/538 (47%), Gaps = 22/538 (4%)

Query: 69  QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKI 128
            ++ VL++    D A  + D+M++  GK  + F              + L++ Y   G+I
Sbjct: 263 SVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLA------------TTLMQGYCLHGEI 310

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF--CVYEF--L 184
            +++++F      G+  +      L+          + YKLCR M  +G     YEF  +
Sbjct: 311 GKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLV 370

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           + GLLR    E+A  +   V+  G VP++ T   ++  L  + ++  A +L+D +   G 
Sbjct: 371 IKGLLRNKQWEDAIALFDLVVDTG-VPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGV 429

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           KP++VT  +L+  +C++  +++A +LY+ M      P+ + Y+ L+ G  K     +   
Sbjct: 430 KPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYA 489

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           LL      G+      ++ +++    +  V    +   R ++ GF+P  ++Y+ +I G  
Sbjct: 490 LLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFV 549

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           + G +  A  ++ Q+  + + P+++TY+S IDG+C++        L   M   G+ PD  
Sbjct: 550 KAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIA 609

Query: 425 VCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             +  IN     G M  AL F    ++  L PN+ ++N+ + G   LK   +  K +  M
Sbjct: 610 AYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSM 669

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               I  D   +T LI G +  G+++ A+ L+ +ML     PD  T++A+ HGL +  +I
Sbjct: 670 IKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDI 729

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
                +   M R  V P+   YN+L+N  I++  L  A +L  ++   G+ PD  TYN
Sbjct: 730 DGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYN 787



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 229/494 (46%), Gaps = 11/494 (2%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--- 179
            R     +++ +F  M   G Y    +   +M   V     G   +L   M G G     
Sbjct: 164 ARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDE 223

Query: 180 -VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            VY   + GL +    + A  +  ++ + G  P   T N ++  L   G++  A  L D 
Sbjct: 224 RVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQ 283

Query: 239 LLLV-GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
           +LL  G K +V   +TL+  +C   ++ KA  L++  +   + P  + Y++LI G    G
Sbjct: 284 MLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEG 343

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
              E  +L    +++GL      F+ V+   +       A+  +D +++ G +P+V +Y 
Sbjct: 344 MTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTG-VPDVFTYG 402

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI  L +  ++ EA  L+ ++    ++PS++T  SL+ G+C+ G + +   LY  M  +
Sbjct: 403 CLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGK 462

Query: 418 GLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G  P+ V  + L+ G +       A     +  +  +    + +N L++G C + R  + 
Sbjct: 463 GFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEV 522

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            ++          P  +T+  +I G    G + SA+ ++ QM ++G+TP+++TY++ I G
Sbjct: 523 DEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDG 582

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
             +     + + +   M  NG+ PDIA YN  +NM  K+ N+  AL     L   GL P+
Sbjct: 583 YCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPN 642

Query: 593 IITYNTIICGYCSL 606
           +  YN+ + GY +L
Sbjct: 643 VTVYNSFVTGYKNL 656



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 231/508 (45%), Gaps = 46/508 (9%)

Query: 115 YSFLIENYVRIGKIDESVEI-----FAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           Y+ +++  V++G++DE++ +      A    M ++L+  L+Q    CL     +G+   L
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGY--CL--HGEIGKALDL 316

Query: 170 CRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
                  G       Y  L+ G   +G+ +  + + RQ+I++G +P+    N ++K L  
Sbjct: 317 FDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLR 376

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           N Q  +A +LFD+++  G  P+V T+  LI+   K  K+ +A  L++ M E  + P ++ 
Sbjct: 377 NKQWEDAIALFDLVVDTG-VPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVT 435

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
              L+ G  + G + E  +L      +G   + V ++++M  Y+      +A    + M 
Sbjct: 436 CHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMH 495

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G      +Y+ILI GLC   R+ E   +  + +     P+ +TY+S+I+GF K+G   
Sbjct: 496 QNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAG--- 552

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
                                      +MG AL  + Q     + PN+  + + +DG CR
Sbjct: 553 ---------------------------MMGSALAMYRQMCEKGITPNIVTYTSFIDGYCR 585

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                  VKL + M    I PD+  +   I     QG++S A+     +LK GLTP+V  
Sbjct: 586 TNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTV 645

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y++ + G    K ++     +  M +  +A D  IY  L++   K  N+  AL+L+ ++ 
Sbjct: 646 YNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEML 705

Query: 586 DRGLEPDIITYNTIICGYCSLNSCLIDG 613
                PD  T+  +  G C   S  IDG
Sbjct: 706 ANHNIPDDKTFTALTHGLC--RSGDIDG 731



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 202/401 (50%), Gaps = 14/401 (3%)

Query: 219 ILKRLCINGQI-GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           ++ R C+ G++ G+A  LFD +   G KP+   ++  I   CK    ++A Q+   M E 
Sbjct: 193 VVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREA 252

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEG----NELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
            L P    Y+ ++D L K GR+ E     +++LL     G K+DV + +++M  Y   G+
Sbjct: 253 GLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLAT---GKKMDVFLATTLMQGYCLHGE 309

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           +G+A+  +D  +  G  P  ++Y++LIKG   +G   E   L  Q++ + L PS   ++ 
Sbjct: 310 IGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNL 369

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           +I G  ++ +  D  +L+D ++  G+ PD      LI+ L     + +A+  + +     
Sbjct: 370 VIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAG 428

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + P++   ++L+ G C      + +KL+  M      P+ +T+T L++G   + +   A 
Sbjct: 429 VKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAY 488

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  +M + G++    TY+ +I+GL     +     M K     G  P    YN ++N  
Sbjct: 489 ALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGF 548

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           +K   + +AL ++ Q+ ++G+ P+I+TY + I GYC  N C
Sbjct: 549 VKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCC 589



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 65/123 (52%)

Query: 166 YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
           YY + +        +Y  L++G  + G +  A  ++ +++    +P+  T   +   LC 
Sbjct: 666 YYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCR 725

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           +G I  A  L D +  +   PN VT++ LINA  ++ KL++AFQL++ M+   +VPD   
Sbjct: 726 SGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTT 785

Query: 286 YSI 288
           Y+I
Sbjct: 786 YNI 788



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 58/117 (49%)

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           + PD  + T L+   A   S + A+ LF +M  +G   D   Y  ++     G+     +
Sbjct: 149 VVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHGDAV 208

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            +F  M   GV PD  +Y + +  L K  + D A+++ G++ + GL+P   TYN+++
Sbjct: 209 RLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVV 265



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 1/165 (0%)

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           + + V   ++P+      L+    R   A D + LF  M       D   + V++R    
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
                 A+ LF +M   G+ PD   Y+  I GL K ++    + +   M   G+ P    
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFT 260

Query: 561 YNVLLNMLIKECNLDAALKLFGQ-LTDRGLEPDIITYNTIICGYC 604
           YN ++++L+K   +D AL+L  Q L   G + D+    T++ GYC
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYC 305



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 22/143 (15%)

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILL--------------------FFQMLKRGLTPDV 523
           + P+ +   VL   +A  GS ++A LL                    + +M+ RG+ PD 
Sbjct: 96  LPPNELVDAVL--SVADAGSPAAATLLSHVLTCLSSAARDCAAAVAAYSRMVTRGVVPDA 153

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            + + ++    +G + +  L +F  M   G   D  +Y+V++   +       A++LF +
Sbjct: 154 KSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHGDAVRLFDE 213

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           +   G++PD   Y   I G C L
Sbjct: 214 MAGAGVKPDERVYAITITGLCKL 236


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 231/501 (46%), Gaps = 11/501 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  ++ +    G I +++ +   M   G   +P +   ++             +  + + 
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH 170

Query: 175 GKGFCVYE-----FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            KG C  +      +++ +  +G ++    + R++   G  P+IV+ N +LK LC+  + 
Sbjct: 171 AKG-CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRW 229

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +   L   ++ VG  PNV TF+TLI   C+    E+  +  + M E    PDL +Y+ +
Sbjct: 230 DDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATI 289

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDG+ K G  +  N++L      GLK +VV +++V+           A      M     
Sbjct: 290 IDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDC 349

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             + ++++IL+   CQ G +     L  Q+L     P ++TY+++I+GFCK G + +   
Sbjct: 350 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVM 409

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L  NM   G KP+ +  ++++ GL       DA       ++   +PN   FNTL++  C
Sbjct: 410 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMC 469

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +       ++L   M +    PD+I+++ +I G+   G    A+ L   M+ +G+TP+ I
Sbjct: 470 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTI 529

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            YS++   L +       + MF  ++   V  D A+YN +++ L K    D A+  F  +
Sbjct: 530 IYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYM 589

Query: 585 TDRGLEPDIITYNTIICGYCS 605
              G  P+  TY  +I G  S
Sbjct: 590 VSNGCMPNESTYTILIRGLAS 610



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/505 (22%), Positives = 206/505 (40%), Gaps = 78/505 (15%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
             G   Y  ++ G  R G +  A  +   V      PN  T   I++ LC  G I +A +
Sbjct: 73  AAGVVAYNAMIAGYCRAGQVAAARRLAAAV---PVPPNAYTYFPIVRSLCARGLIADALT 129

Query: 235 LFDVLLLVG-----PKPNVVTFST------------------------------LINAFC 259
           + D + L G     P  +V+  +                               +++A C
Sbjct: 130 VLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAIC 189

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL--------- 310
           ++  +++  +L   +      PD++ Y+ ++ GL  A R  +  EL++  +         
Sbjct: 190 EQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVA 249

Query: 311 --------------------------DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
                                     + G   D+ ++++++D     G    A     RM
Sbjct: 250 TFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRM 309

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
            + G  PNV+ Y+ ++KGLC   R  EA  L  ++         +T++ L+D FC++G +
Sbjct: 310 PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLV 369

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTL 459
                L + M++ G  PD +  + +IN     GL+ +A+            PN   +  +
Sbjct: 370 DRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIV 429

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           + G CR +R  D  +L   M      P+ +T   LI  +  +G +  AI L  QML  G 
Sbjct: 430 LKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGC 489

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
           +PD+I+YS +I GL K       L +  +M   G+ P+  IY+ + + L +E   D  ++
Sbjct: 490 SPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQ 549

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           +F  + D  +  D   YN +I   C
Sbjct: 550 MFDSIQDATVRSDAALYNAVISSLC 574



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 122/238 (51%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++NG  ++G+++ A  + + +   G  PN ++   +LK LC   +  +A  L   +
Sbjct: 390 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 449

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  PN VTF+TLIN  CK+  +E+A +L   M+     PDLI YS +IDGL KAG+ 
Sbjct: 450 IQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 509

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E  ELL   +++G+  + +++SS+  A    G   + +Q +D + +     +   Y+ +
Sbjct: 510 EEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAV 569

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           I  LC++     A   F  ++     P+  TY+ LI G    G +R+   L   +  R
Sbjct: 570 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 149/321 (46%), Gaps = 39/321 (12%)

Query: 70  LIHVLLQSD--MRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENY 122
           L+  + Q D  + DV  ++      Q G       L    L + GC      Y+ +I  +
Sbjct: 340 LLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML-EHGCIPDVITYTTVINGF 398

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
            + G +DE+V +   MS               +C    N++                 Y 
Sbjct: 399 CKEGLVDEAVMLLKNMS---------------ACGCKPNTIS----------------YT 427

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            ++ GL R     +A  +   +IQ+G +PN VT N ++  +C  G +  A  L   +L+ 
Sbjct: 428 IVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVN 487

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P+++++ST+I+   K  K E+A +L N+M+   + P+ IIYS +   L + GR  + 
Sbjct: 488 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKI 547

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            ++  +  D  ++ D  ++++V+ +     +  RA+  +  M++ G +PN  +Y+ILI+G
Sbjct: 548 IQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRG 607

Query: 363 LCQQGRLVEACGLFGQVLIRR 383
           L  +G + EA  L  ++  RR
Sbjct: 608 LASEGLVREAQDLLSELCSRR 628



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 125/259 (48%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L++   + G+++    +  Q+++ G +P+++T   ++   C  G +  A  L   +
Sbjct: 355 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 414

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KPN ++++ ++   C+  +   A +L + M++   +P+ + ++ LI+ + K G +
Sbjct: 415 SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLV 474

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++  ELL   L  G   D++ +S+V+D     G    A++  + M+N G  PN I YS +
Sbjct: 475 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSM 534

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
              L ++GR  +   +F  +    +      Y+++I   CK  +       +  M+  G 
Sbjct: 535 ASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGC 594

Query: 420 KPDAVVCSLLINGLMGDAL 438
            P+    ++LI GL  + L
Sbjct: 595 MPNESTYTILIRGLASEGL 613



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/277 (20%), Positives = 123/277 (44%), Gaps = 8/277 (2%)

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
            GR       +   G    V++Y+ +I G C+ G++  A  L   V +    P+  TY  
Sbjct: 57  AGRTADAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPV---PPNAYTYFP 113

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-GDALRFFFQSVRMTLIPN 452
           ++   C  G + D  ++ D M  RG      +C +++     G   R   +++++     
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173

Query: 453 LFI----FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
             +     N ++   C      + V+L   +  +  +PD++++  +++G+          
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  +M++ G  P+V T++ +I  L +             M  +G  PD+ +Y  +++ +
Sbjct: 234 ELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGI 293

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            K+ + + A  +  ++   GL+P+++ YNT++ G CS
Sbjct: 294 CKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCS 330


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 209/410 (50%), Gaps = 31/410 (7%)

Query: 203  QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
            ++++ GF P+IVT   +L   C   +   A SL D +  +G +PNVV ++T+IN  CK  
Sbjct: 675  KMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNR 734

Query: 263  KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
             L  A +++  M +  +V D + Y+ LI GL  +GR  +   LL   + R +  +V+ F+
Sbjct: 735  DLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFT 794

Query: 323  SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            +++D +V  G++  A   Y  M+     PN+++Y+ LI G C QGRL +A  +F  ++ +
Sbjct: 795  ALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSK 854

Query: 383  RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
               P ++TY++LI GFCKS ++ DG  L+              C +   GL+GDA     
Sbjct: 855  GCFPDVVTYNTLITGFCKSKRVEDGMKLF--------------CEMTHQGLVGDA----- 895

Query: 443  QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                       F +NTL+ G C+  +     K+F  M    + PD++T+ +L+  + + G
Sbjct: 896  -----------FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNG 944

Query: 503  SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
             +  A+++   + K  +  D+ITY+ II G+ +   +     +F+ + R GV  D   Y 
Sbjct: 945  KIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYI 1004

Query: 563  VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN-TIICGYCSLNSCLI 611
             +++ L +      A KL  ++ + G  P    Y+ T+   Y SL++ LI
Sbjct: 1005 TMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHYTSLSAELI 1054



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 194/388 (50%), Gaps = 31/388 (7%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++++ G+ P+IVT   +L   C+  +I +A SL   ++  G +PNVV ++TLI+  CK  
Sbjct: 125 KMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNG 184

Query: 263 KLEKAFQLYNLMMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            +  A +L N M +   L  DL+ Y+ L+ GL  +G  ++   +L     R +  DV  F
Sbjct: 185 DVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTF 244

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++DA+V  G++  A + Y +ML     PN ++Y+ LI GLC  GRL  A   F  +  
Sbjct: 245 TALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMAS 304

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           +   P+++TY++LI+GFCKS ++ DG  L+  M + GL  D                   
Sbjct: 305 KGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT------------------ 346

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
                       F +NTL+ G C++ +      +F  M    + PD+ITH +L+ G+   
Sbjct: 347 ------------FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVN 394

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G + SA++ F  M        ++ Y+ +IHGL K   +     +F  +   GV PD   Y
Sbjct: 395 GEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTY 454

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGL 589
            +++  L K      A +LF ++ + G+
Sbjct: 455 TIMILGLCKNGPRREADELFRRMKEDGI 482



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 213/429 (49%), Gaps = 6/429 (1%)

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           E L  G L     E+A  +  +++Q   +P++V   ++L  +    +          + L
Sbjct: 34  EKLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMEL 93

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G   ++ +F+ LI+ FC+ ++L  A  +   MM++   P ++ +  L+ G     R+ +
Sbjct: 94  FGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHD 153

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP-NVISYSILI 360
              L+ + +  G + +VVV+++++D     GDV  A++  + M   G L  ++++Y+ L+
Sbjct: 154 AFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLL 213

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC  G   +A  +   +  RR+ P + T+++LID F K G L +   LY  M++  + 
Sbjct: 214 TGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIG 273

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  + LINGL     +  A + F         PN+  +NTL++G C+ +R  D +KL
Sbjct: 274 PNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKL 333

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M    +  D  T+  LI G    G L  A  +F  M+  G+TPD+IT+  ++HGL  
Sbjct: 334 FQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCV 393

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              I   +  F  M        I  YN++++ L K   ++ A +LF +L   G++PD  T
Sbjct: 394 NGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDART 453

Query: 596 YNTIICGYC 604
           Y  +I G C
Sbjct: 454 YTIMILGLC 462



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 191/373 (51%), Gaps = 30/373 (8%)

Query: 232  ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
            A +L   ++ +G +P++VT  +L+N FC+  + ++A  L + M E+ L P+++IY+ +I+
Sbjct: 669  ALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVIN 728

Query: 292  GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            GL K   L    E+      +G+  D V +++++      G    A +    M+     P
Sbjct: 729  GLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDP 788

Query: 352  NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
            NVI ++ LI    ++G L+EA  L+ +++ R + P++LTY+SLI+GFC  G+L D   ++
Sbjct: 789  NVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMF 848

Query: 412  DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            D M+ +G  PD V                               +NTL+ G C+ KR  D
Sbjct: 849  DLMVSKGCFPDVVT------------------------------YNTLITGFCKSKRVED 878

Query: 472  TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             +KLF  M    +  D  T+  LI G    G L+ A  +F +M+  G+ PD++TY+ ++ 
Sbjct: 879  GMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLD 938

Query: 532  GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
             L     I   L M + +++N +  DI  YN+++  + +   +  A  LF  LT +G++ 
Sbjct: 939  CLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKL 998

Query: 592  DIITYNTIICGYC 604
            D I Y T+I G C
Sbjct: 999  DAIAYITMISGLC 1011



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 141/580 (24%), Positives = 249/580 (42%), Gaps = 80/580 (13%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCL 157
           F R++R+ L      Y+ LI  Y ++GK+  + +IF++M   G+  +PD++    L+  L
Sbjct: 334 FQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGV--TPDIITHCILLHGL 391

Query: 158 VDSNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
             +  +G        MR      G   Y  +++GL +   +E A+ +  ++   G  P+ 
Sbjct: 392 CVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDA 451

Query: 214 VTCNKILKRLCINGQIGNASSLF-------------DVLLLVGPKPNVVTFSTLINAFCK 260
            T   ++  LC NG    A  LF             D  L      N V+  T+I    +
Sbjct: 452 RTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKR 511

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
              + ++  LY    +  L   L+    +       G ++    LLL  L+RG   +   
Sbjct: 512 RRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRR--HLLL--LERGNNPESRS 567

Query: 321 FSSV---------------MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           FS                 + + +       A   +  ML    +P+++ ++ ++  + +
Sbjct: 568 FSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAK 627

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS------------------------ 401
             +      LF ++    +   L +++ LI  FC+                         
Sbjct: 628 MNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVT 687

Query: 402 -GKLRDGF----------SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
            G L +GF          SL D+M + GL+P+ V+ + +INGL     + +AL  F+   
Sbjct: 688 LGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGME 747

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +  ++ +   +NTL+ G C   R TD  +L   M    I P+VI  T LI     +G+L 
Sbjct: 748 KKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 807

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  L+ +M++R + P+++TY+++I+G      +    HMF LM   G  PD+  YN L+
Sbjct: 808 EAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLI 867

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
               K   ++  +KLF ++T +GL  D  TYNT+I GYC 
Sbjct: 868 TGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQ 907



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 241/511 (47%), Gaps = 43/511 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+   + G ++ ++E+   M   G  L+ DLV    L++ L  S    Q  ++ R 
Sbjct: 173 YNTLIDCLCKNGDVNIALELLNEMEKKG-RLAADLVTYNTLLTGLCYSGEWRQAARILRD 231

Query: 173 MRGKGFC--VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +     V+ F  L++  +++G ++ A  +++Q++Q    PN VT N ++  LC++G+
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGR 291

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A   FD++   G  PNVVT++TLIN FCK  ++E   +L+  M    LV D   Y+ 
Sbjct: 292 LYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNT 351

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G  + G+L+   ++    +  G+  D++    ++      G++G A+  ++ M +G 
Sbjct: 352 LIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGE 411

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
               +++Y+I+I GLC+  ++ EA  LF ++ +  ++P   TY+ +I G CK+G  R+  
Sbjct: 412 KYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 471

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L+     R +K D ++C    +G +G+               N     T++    R + 
Sbjct: 472 ELF-----RRMKEDGIICQAE-DGHLGEH-----------GTNNQVSLGTIIICPKRRRS 514

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             ++  L+     Y     + +  V +  IAS  S+   +     +L+RG  P+  ++S 
Sbjct: 515 IMESGDLY----YYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSG 570

Query: 529 IIHGLFKG------KNISVGLHMFKLMERNGV---------APDIAIYNVLLNMLIKECN 573
             H           + +   LH  K  +  G+          P I  +  +L  + K   
Sbjct: 571 ASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNK 630

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            D  + LF ++ + G+  D+ ++  +I  +C
Sbjct: 631 FDIVIYLFHKMENLGISHDLYSFTILIHCFC 661



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 158/321 (49%), Gaps = 6/321 (1%)

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G   + R ++  +L L  +       VV F+ ++ A   +      +    +M   G   
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           ++ S++ILI   C+  RL  A  + G+++    +PS++T+ SL+ GFC   ++ D FSL 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 412 DNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQ-SVRMTLIPNLFIFNTLMDGCCR 465
            +M+K G +P+ VV + LI     NG +  AL    +   +  L  +L  +NTL+ G C 
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                   ++   M    I PDV T T LI     QG+L  A  L+ QML+  + P+ +T
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+++I+GL     +      F LM   G  P++  YN L+N   K   ++  +KLF ++ 
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338

Query: 586 DRGLEPDIITYNTIICGYCSL 606
             GL  D  TYNT+I GYC +
Sbjct: 339 REGLVGDTFTYNTLIHGYCQV 359



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 31/172 (18%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ LI  Y + GK++ + ++F  M D G+   PD+V                        
Sbjct: 898  YNTLIHGYCQAGKLNVAQKVFNRMVDCGV--PPDIV------------------------ 931

Query: 175  GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                  Y  L++ L   G IE A  M   + +     +I+T N I++ +C N ++  A  
Sbjct: 932  -----TYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWC 986

Query: 235  LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            LF  L   G K + + + T+I+  C+     +A +L   M E   +P   IY
Sbjct: 987  LFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY 1038



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 22/104 (21%), Positives = 54/104 (51%)

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A+ LF +M++    P V+ ++ ++  +   +     ++  + ME  G++ D+  + +
Sbjct: 46  FEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTI 105

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++   +   L  AL + G++   G +P I+T+ +++ G+C  N
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRN 149


>gi|255661034|gb|ACU25686.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 376

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 196/360 (54%), Gaps = 18/360 (5%)

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C    ++ A ++Y  M+E  + PD ++Y+ +++G F+ GR+K+  EL       G + +V
Sbjct: 1   CDSEDIDGAERVYKEMVESKMSPDAVVYNAMLNGYFRVGRIKDCFELWELMGTEGGQ-NV 59

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG------RLVEA 372
           + F+ +M      G+V +A+  ++ M   GF+ +  +++ILI G C+ G      R++E 
Sbjct: 60  ISFNIMMRGLFNNGEVDKAISIWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEI 119

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
               G VL      +   YS++I+G C+  KL    S+ + MIK G KP+A V ++LING
Sbjct: 120 AEEKGGVL------NAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILING 173

Query: 433 LMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
            +G     DA+R F +       P +  +NTL++G C+ +R  +   L   M     KP 
Sbjct: 174 FVGASKFYDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPC 233

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           VIT+++LI+G+     +  AI L+ Q++ +GL PDV  ++ +IHGL       + L ++ 
Sbjct: 234 VITYSLLIKGLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLALMLYF 293

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            M R   AP++  +N L+    K+ ++  AL ++ ++   GL+PDI++YN  + G CS N
Sbjct: 294 DMNRWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIVSYNITLKGLCSCN 353



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 166 YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
           Y ++  +       VY  ++NG  R G I++ F +   +   G   N+++ N +++ L  
Sbjct: 13  YKEMVESKMSPDAVVYNAMLNGYFRVGRIKDCFELWELMGTEGG-QNVISFNIMMRGLFN 71

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           NG++  A S+++++   G   +  T + LI+ FCK   + K+ ++  +  E   V +   
Sbjct: 72  NGEVDKAISIWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEIAEEKGGVLNAFA 131

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           YS +I+GL +  +L +   +L   +  G K +  V++ +++ +VG      A++ +  M 
Sbjct: 132 YSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKFYDAIRVFQEMG 191

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
           +    P +++Y+ LI GLC+  R  EA  L  ++L +  +P ++TYS LI G C+  K+ 
Sbjct: 192 STDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLIKGLCQGHKVE 251

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLM 460
               L++ +I +GLKPD  + ++LI+GL  +G    AL  +F   R    PNL   NTLM
Sbjct: 252 MAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLM 311

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +G  +     + + ++  +    ++PD++++ + ++G+ S   +S A L     L   + 
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLQPDIVSYNITLKGLCSCNRISFANLFLXDALANAIA 371

Query: 521 PDVIT 525
           P  IT
Sbjct: 372 PTXIT 376



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 167/325 (51%), Gaps = 9/325 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  Y R+G+I +  E++  M   G     +++    +M  L ++  V +   +   
Sbjct: 28  YNAMLNGYFRVGRIKDCFELWELMGTEG---GQNVISFNIMMRGLFNNGEVDKAISIWEL 84

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  GF      +  L++G  + G I  +  +     ++G V N    + ++  LC   +
Sbjct: 85  MKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEIAEEKGGVLNAFAYSAMINGLCREAK 144

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A+S+ + ++  G KPN   ++ LIN F   +K   A +++  M   D  P ++ Y+ 
Sbjct: 145 LDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKFYDAIRVFQEMGSTDCSPTIVTYNT 204

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+GL K  R  E  +L+   L++G K  V+ +S ++        V  A+Q ++++++ G
Sbjct: 205 LINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLIKGLCQGHKVEMAIQLWNQVISKG 264

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V  ++ILI GLC  G+   A  L+  +      P+L+T+++L++GF K G +R+  
Sbjct: 265 LKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL 433
            ++  +++ GL+PD V  ++ + GL
Sbjct: 325 VIWARILRNGLQPDIVSYNITLKGL 349



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 4/280 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI+ + + G I++S+ +     + G  L+      +++ L     + +   +   M 
Sbjct: 97  HAILIDGFCKNGYINKSLRVLEIAEEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMI 156

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      VY  L+NG +      +A  + +++      P IVT N ++  LC   +  
Sbjct: 157 KNGSKPNAHVYNILINGFVGASKFYDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFA 216

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   +L  G KP V+T+S LI   C+  K+E A QL+N ++   L PD+ +++ILI
Sbjct: 217 EAYDLVKEMLEKGWKPCVITYSLLIKGLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILI 276

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL   G+ +    L           ++V  +++M+ +   GD+  A+  + R+L  G  
Sbjct: 277 HGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQ 336

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
           P+++SY+I +KGLC   R+  A       L   + P+ +T
Sbjct: 337 PDIVSYNITLKGLCSCNRISFANLFLXDALANAIAPTXIT 376



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 138/289 (47%), Gaps = 16/289 (5%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----Y 181
           G++D+++ I+  M   G          L+     +  + +  ++      KG  +    Y
Sbjct: 73  GEVDKAISIWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEIAEEKGGVLNAFAY 132

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             ++NGL R+  ++ A  +   +I+ G  PN    N     + ING +G AS  +D + +
Sbjct: 133 SAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYN-----ILINGFVG-ASKFYDAIRV 186

Query: 242 VGP------KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
                     P +VT++TLIN  CK  +  +A+ L   M+E    P +I YS+LI GL +
Sbjct: 187 FQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLIKGLCQ 246

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
             +++   +L    + +GLK DV + + ++     +G    A+  Y  M      PN+++
Sbjct: 247 GHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVT 306

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           ++ L++G  + G +  A  ++ ++L   L+P +++Y+  + G C   ++
Sbjct: 307 HNTLMEGFYKDGDIRNALVIWARILRNGLQPDIVSYNITLKGLCSCNRI 355


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 241/504 (47%), Gaps = 10/504 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++   + G+++E+  +   M +  +  S      L+S L      G+   + + M+
Sbjct: 249 YNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQ 308

Query: 175 GKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G G    E + N ++    RKG    A  +  +++ +G    +VT N I K LC  G++ 
Sbjct: 309 GFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEME 368

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCK-EAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           +A  + D +LL G   +   F++++    +   +L+   +L   M+   L P+  + +  
Sbjct: 369 HAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTAC 428

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I  L K+G+ +E  E+    L +GL ++V   ++++       ++  A +    M+N G 
Sbjct: 429 IQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGV 488

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             + I+Y+I+I+G C+  ++ EA  L   ++ R  +P L T++  +  +C  GK+ +   
Sbjct: 489 ELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILH 548

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L D M   GLKPD V    +I+G      M  A  +  + ++  L PN  I+N L+ G  
Sbjct: 549 LLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYG 608

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           R    +D + +   M    I+P  +T+  L+  +   G +     +F Q + + +   VI
Sbjct: 609 RNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVI 668

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            Y+ II G  K   I   +  FK M   G+ P+   Y  L+    K  N + A KLF ++
Sbjct: 669 GYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEM 728

Query: 585 TDRGLEPDIITYNTIICGYCSLNS 608
              G+ PD ++YNT+I G+C ++S
Sbjct: 729 VSLGIVPDSVSYNTLISGFCEVDS 752



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 138/587 (23%), Positives = 259/587 (44%), Gaps = 79/587 (13%)

Query: 64  SPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS--FLIE- 120
           SP ++ L   LLQS + D AS    + ++     +N   +   ++ D  C  +   L+  
Sbjct: 90  SPRVSTL---LLQSLVADRASLPSARRLVSRLLRFNPLSVAAAAIADSHCTATADLLVRA 146

Query: 121 --NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
             N    G +  + + F  +S  G   SP +  +  S LV++   G    + R + G+  
Sbjct: 147 CLNSPAPGSLSRAADAFLELSARGA--SPSI--KTCSILVEALGCGGQLDVARKVFGE-- 200

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
                     +R G              +   P++ T   ++K LC  G+I  A ++   
Sbjct: 201 ----------MRDG--------------KTVAPDVHTYTAMIKALCRAGEIDAAFAMLAE 236

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           L   G +P VVT++ L++A CK  ++E+AF+L   M+E  + P ++ + ILI GL +  +
Sbjct: 237 LRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQ 296

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
             E   +L      G+  + V+++ ++  +   G    A++ +D M++ G    V++Y++
Sbjct: 297 FGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNL 356

Query: 359 LIKGLCQQGRLVEA---------------CGLFGQV---------------------LIR 382
           + K LC++G +  A               C LF  V                     L R
Sbjct: 357 IAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLAR 416

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            L+P+    ++ I   CKSGK  +   ++  ++ +GL  +    + LI+GL     M +A
Sbjct: 417 FLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEA 476

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            +     V   +  +   +N ++ GCC+  +  + ++L   M     KPD+ T  + +  
Sbjct: 477 TKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHT 536

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
             + G +   + L  QM   GL PD++TY  II G  K K++         + +NG+ P+
Sbjct: 537 YCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPN 596

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             IYN L+    +  N+  A+ +   +   G++P  +TYN+++   C
Sbjct: 597 AVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMC 643



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 194/399 (48%), Gaps = 11/399 (2%)

Query: 219 ILKRLCIN----GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           +L R C+N    G +  A+  F  L   G  P++ T S L+ A     +L+ A +++  M
Sbjct: 142 LLVRACLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEM 201

Query: 275 MEMDLV-PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
            +   V PD+  Y+ +I  L +AG +     +L      G++  VV ++ +MDA    G 
Sbjct: 202 RDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGR 261

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           V  A +   RM+ G   P+++++ ILI GL +  +  E   +  ++    + P+ + Y+ 
Sbjct: 262 VEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNE 321

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMT 448
           +I   C+ G   +   L+D M+ +G+K   V  +L+       G M  A +   + +   
Sbjct: 322 MIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAG 381

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTV-KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
           ++ +  +FN+++    R     D V +L   M    +KP+    T  I+ +   G    A
Sbjct: 382 MMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEA 441

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             ++FQ+L +GL  +V T +A+IHGL +G N+     + K M  +GV  D   YN+++  
Sbjct: 442 AEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQG 501

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             K   +D A++L   +  RG +PD+ T+N  +  YC+L
Sbjct: 502 CCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNL 540



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 170/343 (49%), Gaps = 9/343 (2%)

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           GKG  V       L++GL +   ++ A  + + ++  G   + +T N +++  C   ++ 
Sbjct: 450 GKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMD 509

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L D ++  G KP++ TF+  ++ +C   K+E+   L + M    L PD++ Y  +I
Sbjct: 510 EAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTII 569

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  KA  + + NE L   +  GL+ + V++++++  Y   G++  A+   D M   G  
Sbjct: 570 DGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQ 629

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P  ++Y+ L+  +C  G + E   +F Q +++ +E  ++ Y+ +I GFCK GK+ +    
Sbjct: 630 PTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMY 689

Query: 411 YDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M  RG+ P+ +  + L+     +G   +A + F + V + ++P+   +NTL+ G C 
Sbjct: 690 FKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCE 749

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           +      V+    M    +K D  ++   + GI +      A+
Sbjct: 750 VDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEAV 792



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 174/360 (48%), Gaps = 10/360 (2%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C+ E     L + G  E A  +  QV+ +G   N+ T N ++  LC    +  A+ +   
Sbjct: 428 CIQE-----LCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKA 482

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           ++  G + + +T++ +I   CK +K+++A QL + M++    PDL  ++I +      G+
Sbjct: 483 MVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGK 542

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           ++E   LL      GLK D+V + +++D Y    D+ +A +    ++  G  PN + Y+ 
Sbjct: 543 VEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNA 602

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI G  + G + +A G+   +    ++P+ +TY+SL+   C +G + +  +++   I + 
Sbjct: 603 LIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKD 662

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           ++   +  +++I G      + +A+ +F +     + PN   + TLM    +     +  
Sbjct: 663 IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEAS 722

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           KLF  M    I PD +++  LI G     SL   +    +M  + L  D  +Y+A + G+
Sbjct: 723 KLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/243 (18%), Positives = 89/243 (36%), Gaps = 46/243 (18%)

Query: 383 RLEPSLLTYSSLIDGFCKS---------------GKLRDGFSLYDNMIKRGLKPDAVVCS 427
           R  P  +  +++ D  C +               G L      +  +  RG  P    CS
Sbjct: 120 RFNPLSVAAAAIADSHCTATADLLVRACLNSPAPGSLSRAADAFLELSARGASPSIKTCS 179

Query: 428 LLINGL-MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           +L+  L  G  L    +           +F  + DG                     + P
Sbjct: 180 ILVEALGCGGQLDVARK-----------VFGEMRDG-------------------KTVAP 209

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           DV T+T +I+ +   G + +A  +  ++ + G+ P V+TY+ ++  L K   +     + 
Sbjct: 210 DVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLK 269

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             M    V P I  + +L++ L +         +  ++   G+ P+ + YN +I  +C  
Sbjct: 270 GRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRK 329

Query: 607 NSC 609
             C
Sbjct: 330 GHC 332


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/564 (24%), Positives = 260/564 (46%), Gaps = 106/564 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++  I  + + GK++E+V++F+ M + G+  +P++V                        
Sbjct: 252 FTTAINAFCKGGKVEEAVKLFSKMEEAGV--APNVV------------------------ 285

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 +  +++GL   G  + AF    ++++RG  P ++T + ++K L    +IG+A  
Sbjct: 286 -----TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF 340

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +   G  PNV+ ++ LI++F +   L KA ++ +LM+   L      Y+ LI G  
Sbjct: 341 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 400

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVM---------DA---YVGI----------- 331
           K G+      LL   L  G  ++   F+SV+         D+   +VG            
Sbjct: 401 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 460

Query: 332 ------------GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
                       G   +A++ + + LN GF+ +  + + L+ GLC+ G+L EA  +  ++
Sbjct: 461 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 520

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG---- 435
           L R      ++Y++LI G C   KL + F   D M+KRGLKPD    S+LI GL      
Sbjct: 521 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 580

Query: 436 -DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A++F+    R  ++P+++ ++ ++DGCC+ +R  +  + F  M   N++P+ + +  L
Sbjct: 581 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 640

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           IR     G LS A+ L   M  +G++P+  TY+++I G+     +     +F+ M   G+
Sbjct: 641 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 700

Query: 555 APDIAIYNVLLN-------MLIKEC----------------------------NLDAALK 579
            P++  Y  L++       M+  EC                            N+  A +
Sbjct: 701 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 760

Query: 580 LFGQLTDRGLEPDIITYNTIICGY 603
           L  ++ ++G+ PD ITY   I GY
Sbjct: 761 LLNEMREKGIVPDSITYKEFIYGY 784



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 235/500 (47%), Gaps = 17/500 (3%)

Query: 117 FLIENYVRIGKIDE---SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
            LIE Y    K D    ++++F  +++ G++ S      L++ LV +N   ++ K C A 
Sbjct: 182 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRAN---EFQKCCEAF 238

Query: 174 ----RGKGFCVYEFL--MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
               +G    VY F   +N   + G +E A  +  ++ + G  PN+VT N ++  L + G
Sbjct: 239 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 298

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A    + ++  G +P ++T+S L+    +  ++  A+ +   M +    P++I+Y+
Sbjct: 299 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 358

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LID   +AG L +  E+    + +GL L    +++++  Y   G    A +    ML+ 
Sbjct: 359 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 418

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GF  N  S++ +I  LC       A    G++L+R + P     ++LI G CK GK    
Sbjct: 419 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 478

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+   + +G   D    + L++GL     + +A R   + +    + +   +NTL+ G
Sbjct: 479 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 538

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           CC  K+  +       M    +KPD  T+++LI G+ +   +  AI  +    + G+ PD
Sbjct: 539 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 598

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TYS +I G  K +    G   F  M    V P+  +YN L+    +   L  AL+L  
Sbjct: 599 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 658

Query: 583 QLTDRGLEPDIITYNTIICG 602
            +  +G+ P+  TY ++I G
Sbjct: 659 DMKHKGISPNSATYTSLIKG 678



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 191/384 (49%), Gaps = 12/384 (3%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  +F VL   G  P+  T + L+ +  +  + +K  + ++++ +  + PD+ +++  I+
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 257

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY---DRMLNGG 348
              K G+++E  +L     + G+  +VV F++V+D   G+G  GR  + +   ++M+  G
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID---GLGMCGRYDEAFMFKEKMVERG 314

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P +I+YSIL+KGL +  R+ +A  +  ++  +   P+++ Y++LID F ++G L    
Sbjct: 315 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 374

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            + D M+ +GL   +   + LI     NG   +A R   + + +    N   F +++   
Sbjct: 375 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 434

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C        ++    M + N+ P     T LI G+   G  S A+ L+FQ L +G   D 
Sbjct: 435 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 494

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            T +A++HGL +   +     + K +   G   D   YN L++    +  LD A     +
Sbjct: 495 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 554

Query: 584 LTDRGLEPDIITYNTIICGYCSLN 607
           +  RGL+PD  TY+ +ICG  ++N
Sbjct: 555 MVKRGLKPDNYTYSILICGLFNMN 578



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 104/235 (44%), Gaps = 8/235 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM----SCLVDSNSVGQYY--K 168
           YS LI     + K++E+++ +      G+   PD+    +     C  +    GQ +  +
Sbjct: 567 YSILICGLFNMNKVEEAIQFWDDCKRNGML--PDVYTYSVMIDGCCKAERTEEGQEFFDE 624

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +          VY  L+    R G +  A  +   +  +G  PN  T   ++K + I  +
Sbjct: 625 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 684

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  LF+ + + G +PNV  ++ LI+ + K  ++ K   L   M   ++ P+ I Y++
Sbjct: 685 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 744

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           +I G  + G + E + LL    ++G+  D + +   +  Y+  G V  A +  D 
Sbjct: 745 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 228/456 (50%), Gaps = 72/456 (15%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LI +++    +D AS VF  ++   G   +   +F           S LI  Y+  G + 
Sbjct: 35  LIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVF-----------SGLINAYLESGFVR 83

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
           +++E F    +  + +  D  ++++  L+      +Y+KL          V+ F      
Sbjct: 84  DAIECFRLTREHKLRVPFDTCRKVLEHLMKL----KYFKL----------VWGF------ 123

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
                      ++++++ G+  ++   N ++ R C  G+I  A S+FD +   G +P+VV
Sbjct: 124 -----------YKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVV 172

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           +F+TL+N + +   L++ F+L N M    + PD+  YS+LI+GL K  ++ E N+L    
Sbjct: 173 SFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEM 232

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           LD+GL  + V F++++D +   G V  A++TY +ML+  FLP++I+Y+ LI GLC++G L
Sbjct: 233 LDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDL 292

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  L  ++ ++ L+P  +TY++LIDG CK G L   F L + M+K  ++ D V  + L
Sbjct: 293 KQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTAL 352

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
           I+GL                              C+  RATD  K+   M    +KPD  
Sbjct: 353 ISGL------------------------------CQEGRATDAEKMLREMLSVGLKPDNG 382

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           T+T++I     +  + +A  L  +M ++G  P V+T
Sbjct: 383 TYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 182/375 (48%), Gaps = 13/375 (3%)

Query: 231 NASSLFDVLLLVG--PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +AS++F  +L      + ++  FS LINA+ +   +  A + + L  E  L         
Sbjct: 47  SASAVFAAILETKGTQRSDIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRK 106

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +++ L K    K         L+ G    +  F+ +M  +   G++  A   +D +   G
Sbjct: 107 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWG 166

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V+S++ L+ G  + G L +   L   +    ++P + TYS LI+G CK  K+ +  
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEAN 226

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L++ M+ +GL P+ V  + LI     NG +  A+  + Q +    +P+L  +NTL+ G 
Sbjct: 227 DLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGL 286

Query: 464 CR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           C+   LK+A D   L   M M  +KPD IT+T LI G   +G L SA  L   M+K  + 
Sbjct: 287 CKKGDLKQAQD---LLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIR 343

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
            D + Y+A+I GL +    +    M + M   G+ PD   Y +++N   K+ ++  A KL
Sbjct: 344 LDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKL 403

Query: 581 FGQLTDRGLEPDIIT 595
             ++  +G  P ++T
Sbjct: 404 LKEMQRQGHVPCVVT 418



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 163/328 (49%), Gaps = 5/328 (1%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+ ++S LI+   ++G +++  E      +  L++       V++  + +         Y
Sbjct: 65  DIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             +L  G+  ++  ++IL+   C++G +  A  +F  +    L PS++++++L++G+ + 
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRL 184

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L  GF L + M   G++PD    S+LINGL     M +A   F + +   L+PN   F
Sbjct: 185 GDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTF 244

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  +    ++ +  M      PD+IT+  LI G+  +G L  A  L  +M  
Sbjct: 245 TTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRM 304

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL PD ITY+ +I G  K  ++     + + M +  +  D   Y  L++ L +E     
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATD 364

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+  ++   GL+PD  TY  II  +C
Sbjct: 365 AEKMLREMLSVGLKPDNGTYTMIINEFC 392



 Score = 43.5 bits (101), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 2/132 (1%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           + D+   + LI      G +  AI  F    +  L     T   ++  L K K   +   
Sbjct: 63  RSDIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +K +   G    +  +N+L++   KE  +  A  +F  +T  GL P ++++NT++ GY 
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYI 182

Query: 605 SLNSCLIDGYFK 616
            L    +D  FK
Sbjct: 183 RLGD--LDQGFK 192


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 244/499 (48%), Gaps = 9/499 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I +   +  +  + E+ A+M   G  ++      L+  L     V +   + + + 
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           GK        Y  L+ GL +    E    M  +++   F P+    + +++ L   G+I 
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +L   ++  G  PN+  ++ LI++ CK  K  +A  L++ M ++ L P+ + YSILI
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D   + G+L      L   +D GLKL V  ++S+++ +   GD+  A      M+N    
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P V++Y+ L+ G C +G++ +A  L+ ++  + + PS+ T+++L+ G  ++G +RD   L
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++ M +  +KP+ V  +++I G      M  A  F  +     ++P+ + +  L+ G C 
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +A++       +   N + + I +T L+ G   +G L  A+ +  +M++RG+  D++ 
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y  +I G  K K+  +   + K M   G+ PD  IY  +++   K  +   A  ++  + 
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709

Query: 586 DRGLEPDIITYNTIICGYC 604
           + G  P+ +TY  +I G C
Sbjct: 710 NEGCVPNEVTYTAVINGLC 728



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/537 (24%), Positives = 249/537 (46%), Gaps = 52/537 (9%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM-- 173
           S L+E   + GKI+E++ +   + D G+  SP+L   + + L+DS   G+ +     +  
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGV--SPNLF--VYNALIDSLCKGRKFHEAELLFD 391

Query: 174 -RGK-----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
             GK         Y  L++   R+G ++ A     +++  G   ++   N ++   C  G
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            I  A      ++    +P VVT+++L+  +C + K+ KA +LY+ M    + P +  ++
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+ GLF+AG +++  +L     +  +K + V ++ +++ Y   GD+ +A +    M   
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +P+  SY  LI GLC  G+  EA      +     E + + Y+ L+ GFC+ GKL + 
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF-----QSVRMTLIPNLFIFNTLMDG 462
            S+   M++RG+  D V   +LI+G +    R  F     +     L P+  I+ +++D 
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-------- 514
             +     +   ++ LM      P+ +T+T +I G+   G ++ A +L  +M        
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751

Query: 515 ---------------------------LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
                                      + +GL  +  TY+ +I G  +   I     +  
Sbjct: 752 QVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELIT 811

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            M  +GV+PD   Y  ++N L +  ++  A++L+  +T++G+ PD + YNT+I G C
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 243/523 (46%), Gaps = 24/523 (4%)

Query: 95  GKTYNFFRLFRDSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G+ ++   L  D +G  G       YS LI+ + R GK+D ++     M D G+ LS   
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVI 205
              L++       +         M  K        Y  LM G   KG I  A  ++ ++ 
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
            +G  P+I T   +L  L   G I +A  LF+ +     KPN VT++ +I  +C+E  + 
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSV 324
           KAF+    M E  +VPD   Y  LI GL   G+  E  ++ +  L +G  +L+ + ++ +
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGL 618

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +  +   G +  A+     M+  G   +++ Y +LI G  +        GL  ++  R L
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
           +P  + Y+S+ID   K+G  ++ F ++D MI  G  P+ V  + +INGL     + +A  
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738

Query: 440 FFFQSVRMTLIPNLFIFNTLMD----GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
              +   ++ +PN   +   +D    G   +++A + +   +L G+     +  T+ +LI
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE-LHNAILKGLL---ANTATYNMLI 794

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           RG   QG +  A  L  +M+  G++PD ITY+ +I+ L +  ++   + ++  M   G+ 
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           PD   YN L++       +  A +L  ++  +GL P+  T  T
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 217/423 (51%), Gaps = 10/423 (2%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           + +   +P + T + +L  L      G A  LF+ ++ VG +P+V  ++ +I + C+   
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L +A ++   M       +++ Y++LIDGL K  ++ E   +      + LK DVV + +
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++     + +    ++  D ML   F P+  + S L++GL ++G++ EA  L  +V+   
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDAL 438
           + P+L  Y++LID  CK  K  +   L+D M K GL+P+ V  S+LI+     G +  AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
            F  + V   L  +++ +N+L++G C+    +        M    ++P V+T+T L+ G 
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
            S+G ++ A+ L+ +M  +G+ P + T++ ++ GLF+   I   + +F  M    V P+ 
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC-----SLNSCLIDG 613
             YNV++    +E ++  A +   ++T++G+ PD  +Y  +I G C     S     +DG
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 614 YFK 616
             K
Sbjct: 603 LHK 605



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 165/356 (46%), Gaps = 31/356 (8%)

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMM-EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           F  LI  + +  ++     ++ +M+ ++ L+P++   S L+ GL K        EL    
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           +  G++ DV +++ V+ +   + D+ RA +    M   G   N++ Y++LI GLC++ ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA G+   +  + L+P ++TY +L+ G CK  +   G  + D M+              
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML-------------- 324

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
                   LRF          P+    ++L++G  +  +  + + L   +  + + P++ 
Sbjct: 325 -------CLRFS---------PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
            +  LI  +        A LLF +M K GL P+ +TYS +I    +   +   L     M
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
              G+   +  YN L+N   K  ++ AA     ++ ++ LEP ++TY +++ GYCS
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 1/154 (0%)

Query: 456 FNTLMDGCCRLKRATDTVKLF-MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           F+ L+    R +R  D V +F M++   ++ P+V T + L+ G+        A+ LF  M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           +  G+ PDV  Y+ +I  L + K++S    M   ME  G   +I  YNVL++ L K+  +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
             A+ +   L  + L+PD++TY T++ G C +  
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 224/460 (48%), Gaps = 44/460 (9%)

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
            L R G   +A  + R + + G VP+ V    ++  L   G +  A+ L D +LL+G   
Sbjct: 186 ALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAA 245

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           +V TF+ L+   C   ++ +A +L + MM    +P ++ Y  L+ GL +  +  E   +L
Sbjct: 246 DVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML 305

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
                R  +++VV+ ++V+   +  G + RA + Y+ M + G  P+V +YSIL+ GLC+ 
Sbjct: 306 ----GRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKL 361

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL------- 419
           GR   A  +  ++  +   P+++TYS+L+  FC++G   D  ++ D M+ +G        
Sbjct: 362 GRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGY 421

Query: 420 ----------------------------KPDAVVCSLLI-----NGLMGDALRFFFQSVR 446
                                       KPD    + +I     N LM +A   F   + 
Sbjct: 422 NGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIE 481

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             ++ N   +NTL+    R  R  + ++L   M ++  + DVI++  LI+ +  +G++  
Sbjct: 482 EGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDR 541

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           ++ L  +M+ +G+ P+  +Y+ +I+ L K   +   L + K M   G+ PDI  YN L+N
Sbjct: 542 SMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLIN 601

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            L K     AAL L  +L +  + PDI+TYN +I  +C +
Sbjct: 602 GLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKV 641



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/552 (25%), Positives = 257/552 (46%), Gaps = 40/552 (7%)

Query: 83  ASHVFDKMVIQFG-----KTYN------------------FFRLFRDSLGDFGCDYSFLI 119
           A H+ D+M  +F      ++YN                  + R+ RD +      +    
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC 179
               R+G+  +++ +   M+  G      L Q ++  LV    V +   L   M   G  
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 180 V----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                +  L+ GL   G +  A  +  +++ +G +P++VT   +L+ LC   Q   A ++
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
              L    P+ NVV  +T+I     E KL +A +LY +M      PD+  YSIL+ GL K
Sbjct: 305 LGRL----PEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCK 360

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV--GIGDVGRAVQTYDRMLNGGFLPNV 353
            GR      +L    ++G   ++V +S+++ ++   G+ D  RA+   D+ML  GF  N 
Sbjct: 361 LGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM--LDQMLAKGFSMNS 418

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
             Y+ +I  LC+ G+L +A  L  ++  +  +P + TY+++I   C +  + +   ++ N
Sbjct: 419 QGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRN 478

Query: 414 MIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           +I+ G+  + +     + +LL NG   + LR   + +      ++  +N L+   C+   
Sbjct: 479 LIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGN 538

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
              ++ L   M    IKP+  ++ +LI  +   G +  A+ L  +ML +GLTPD++TY+ 
Sbjct: 539 VDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 598

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+GL K       L++ + +    V PDI  YN+L++   K   LD A  L  +    G
Sbjct: 599 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGG 658

Query: 589 LEPDIITYNTII 600
           + P+  T+  ++
Sbjct: 659 IVPNERTWGMMV 670



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 194/445 (43%), Gaps = 37/445 (8%)

Query: 197 AFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           A H+  Q+ +R    P+  + N +L  L       +A  L+  +L     P   TF    
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
            A C+  +   A  L   M     VPD ++Y  +I  L   G + E   LL   L  G  
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            DV  F+ ++    G+G V  A +  DRM+  G +P+V++Y  L++GLC+  +  EAC +
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 376 FGQV--------------------LIRRLE-----------PSLLTYSSLIDGFCKSGKL 404
            G++                    L R  E           P + TYS L+ G CK G+ 
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
                + D M ++G  P+ V  S L+     NG+  DA     Q +      N   +N +
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +   C+  +     +L   M     KPD+ T+  +I  + +   +  A  +F  +++ G+
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGV 484

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             + ITY+ +IH L +      GL +   M  +G   D+  YN L+  L KE N+D ++ 
Sbjct: 485 VANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMA 544

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           L  ++  +G++P+  +YN +I   C
Sbjct: 545 LLEEMVTKGIKPNNFSYNMLINELC 569



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 225/505 (44%), Gaps = 63/505 (12%)

Query: 59  HNCVSSPNIAQ-LIHVLLQSDMRDVASHVFDKMVIQ------------------FGKTYN 99
           H CV    + Q +IH L+       A+ + D+M++                    G+   
Sbjct: 206 HGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVRE 265

Query: 100 FFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM 154
             RL  D +   GC      Y FL++   R  + DE+  +   + ++ + +   +++   
Sbjct: 266 AARLV-DRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIR--- 321

Query: 155 SCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
            CL +   + +  +L   M  KG       Y  LM+GL + G   +A  M  ++ ++G  
Sbjct: 322 GCLTEGK-LARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCA 380

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PNIVT + +L   C NG   +A ++ D +L  G   N   ++ +I A CK+ KL++A +L
Sbjct: 381 PNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRL 440

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M      PD+  Y+ +I  L     ++E   +    ++ G+  + + +++++ A + 
Sbjct: 441 VQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLR 500

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G     ++    ML  G   +VISY+ LIK LC++G +  +  L  +++ + ++P+  +
Sbjct: 501 NGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFS 560

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI 450
           Y+ LI+  CK+GK+RD   L   M+ +GL PD V                          
Sbjct: 561 YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVT------------------------- 595

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
                +NTL++G C++      + L   +   N+ PD++T+ +LI        L  A +L
Sbjct: 596 -----YNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAML 650

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFK 535
             + +  G+ P+  T+  ++    +
Sbjct: 651 LDKAISGGIVPNERTWGMMVQNFVR 675



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 162/325 (49%), Gaps = 10/325 (3%)

Query: 93  QFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G+  +  R+  D + + GC      YS L+ ++ R G  D++  +   M   G  ++ 
Sbjct: 360 KLGRFGSAVRML-DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNS 418

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQ 203
                ++  L     + Q  +L + M+ +G     C Y  ++  L    ++E A H+ R 
Sbjct: 419 QGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRN 478

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +I+ G V N +T N ++  L  NG+      L   +LL G + +V++++ LI A CKE  
Sbjct: 479 LIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGN 538

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           ++++  L   M+   + P+   Y++LI+ L KAG++++  EL    L++GL  D+V +++
Sbjct: 539 VDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 598

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           +++    +G    A+   +++ N    P++++Y+ILI   C+   L +A  L  + +   
Sbjct: 599 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGG 658

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGF 408
           + P+  T+  ++  F +     +G+
Sbjct: 659 IVPNERTWGMMVQNFVRQTVNLEGY 683



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 59/125 (47%)

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
           + + P   ++ V++  +A     + A+LL+ +ML+  + P   T+      L +      
Sbjct: 136 FAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGD 195

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L + + M R+G  PD  +Y  +++ L+ +  +  A  L  ++   G   D+ T+N ++ 
Sbjct: 196 ALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVL 255

Query: 602 GYCSL 606
           G C L
Sbjct: 256 GLCGL 260


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 250/524 (47%), Gaps = 10/524 (1%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +  K+Y  F L    +      ++  I  + + G++ ++V++F  M  +G++ +      
Sbjct: 236 ELHKSYEVFDLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNN 295

Query: 153 LMSCLVDSNSVGQYYK----LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           ++  L  S    +  +    + R+        Y  L++GL++  + E A  +  ++   G
Sbjct: 296 VIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMG 355

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           F PN V  N ++   C  G +G A  + D + + G KPN VTF+TL+  FC+  ++E+A 
Sbjct: 356 FAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAE 415

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           Q+   ++   L  ++ + S +I  L +        +++   L   +++   + + ++   
Sbjct: 416 QVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGL 475

Query: 329 VGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                   A++ + ++    G   N ++ + L+ GLC++G + E   +  Q+L + L   
Sbjct: 476 CKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLD 535

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MG---DALRFFF 442
            ++Y++LI G CK GK+ + F L + M+++  +PD    + L+ GL  MG   D  R   
Sbjct: 536 RISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLH 595

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           ++     +PN++ +  L++G C+  R  D VK F  +    ++   + + +LI      G
Sbjct: 596 EAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIG 655

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           +++ A  L   M  RG+ P   TYS++IHG+     +     +F+ M   G+ P++  Y 
Sbjct: 656 NVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYT 715

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            L+    K   +D    +  +++  G+ P+ ITY  +I GYC L
Sbjct: 716 ALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKL 759



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 211/467 (45%), Gaps = 48/467 (10%)

Query: 186 NGLLRKGVIENAFHMHRQVIQ---RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
           N LL   V  N  H   +V     +G  P++ T    +   C  G++G+A  LF  +  +
Sbjct: 225 NLLLSSLVKANELHKSYEVFDLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGL 284

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  PNVVT++ +I+   K  + E+A +  + M+   + P ++ Y +LI GL K    +E 
Sbjct: 285 GVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEA 344

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           NE+L+     G   + VVF++++D Y   GD+G A++  D M   G  PN ++++ L++G
Sbjct: 345 NEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQG 404

Query: 363 LCQQG-----------------------------RLVEACGLFGQVLIR--------RLE 385
            C+                               RL+E  G    + I         R+ 
Sbjct: 405 FCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVS 464

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK-RGLKPDAVVCSLLINGL-----MGDALR 439
            SLLT   L+ G CK     +   L+  +   +GL  + V  + L++GL     M +   
Sbjct: 465 DSLLT--PLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFE 522

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              Q +   L+ +   +NTL+ GCC+  +  +  KL   M     +PD  T+  L++G+A
Sbjct: 523 VLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLA 582

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G +     L  +  + G  P+V TY+ ++ G  K   I   +  FK ++   V     
Sbjct: 583 DMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSV 642

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +YN+L+    +  N+  A KL   +  RG+ P   TY+++I G C +
Sbjct: 643 VYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCI 689



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 129/540 (23%), Positives = 226/540 (41%), Gaps = 72/540 (13%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           R+ R  +      Y  LI   +++   +E+ E+   M  MG   +  +   L+       
Sbjct: 315 RMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKG 374

Query: 162 SVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            +G+  ++   M  KG    F  +  L+ G  R   +E A  +   ++  G   N+  C+
Sbjct: 375 DMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCS 434

Query: 218 KILKRL---------------CINGQIGNASSL---------------------FDVLLL 241
            ++ RL                ++G I  + SL                     F +  +
Sbjct: 435 YVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAV 494

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G   N VT + L++  C+   +E+ F++   M+E  L+ D I Y+ LI G  K G+++E
Sbjct: 495 KGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEE 554

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             +L    + +  + D   ++ +M     +G +    +        GF+PNV +Y++L++
Sbjct: 555 AFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLE 614

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C+  R+ +A   F  +   ++E S + Y+ LI  +C+ G + + F L D M  RG+ P
Sbjct: 615 GYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILP 674

Query: 422 DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
                S LI+G+                             CC + R  +  ++F  M  
Sbjct: 675 TCATYSSLIHGM-----------------------------CC-IGRVDEAKEIFEEMRN 704

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             + P+V  +T LI G    G +     +  +M   G+ P+ ITY+ +I G  K  N+  
Sbjct: 705 EGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKE 764

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE-PDIITYNTII 600
              +   M RNG+APD   YN L     KE  L   L+     ++ GL   + ITYNT+I
Sbjct: 765 ARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQ-SDHKSNIGLPLEEEITYNTLI 823



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 187/369 (50%), Gaps = 9/369 (2%)

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG--KGFCVYEFLMNGLLRKGVIENAFHMHR 202
           L+P LV  L  C   S ++  ++KL  A++G          L++GL  +G +E  F + +
Sbjct: 468 LTP-LVVGLCKCEGHSEAIELWFKLA-AVKGLAANTVTSNALLHGLCERGNMEEVFEVLK 525

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           Q++++G + + ++ N ++   C  G+I  A  L + ++    +P+  T++ L+       
Sbjct: 526 QMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMG 585

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           K++   +L +   E   VP++  Y++L++G  KA R+++  +         ++L  VV++
Sbjct: 586 KIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYN 645

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            ++ AY  IG+V  A +  D M + G LP   +YS LI G+C  GR+ EA  +F ++   
Sbjct: 646 ILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNE 705

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            L P++  Y++LI G CK G++    S+   M   G++P+ +  +++I+G      M +A
Sbjct: 706 GLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEA 765

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                + +R  + P+   +N L  G C+ +  T T++      +     + IT+  LI  
Sbjct: 766 RELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEEEITYNTLIHK 825

Query: 498 IASQGSLSS 506
           +    ++S+
Sbjct: 826 LHPHTAISN 834


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 164/655 (25%), Positives = 267/655 (40%), Gaps = 121/655 (18%)

Query: 51  AIQFFKWT--HNCVSSPNIAQL----IHVLLQSDMRDVASHVFDKMVIQFGKTYNFF--- 101
           A++F KW      + + +I QL     H+L+++ M D A H+  ++ +  GK+   F   
Sbjct: 53  ALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 112

Query: 102 ----RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
               RL   +   F      LI  Y+R G I +S+EIF  M   G   S      ++  +
Sbjct: 113 MATYRLCNSNPSVF----DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSI 168

Query: 158 VDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
           V S      +   + M  +  C     +  L+N L  +G  + + ++ +++ + G+ P I
Sbjct: 169 VKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTI 228

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPK---------------------------- 245
           VT N +L   C  G+   A  L D + L G                              
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRD 288

Query: 246 -------PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
                  PN VT++TL+N F  E K+  A QL N M+   L P+ + ++ LIDG    G 
Sbjct: 289 MRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGN 348

Query: 299 LKE--------------GNEL----LLTALDRGLKLDV-----------------VVFSS 323
            KE              G E+    LL  L +  + D+                 + ++ 
Sbjct: 349 FKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++D     G +  AV   + M   G  P++++YS LI G C+ GRL  A  +  ++    
Sbjct: 409 MIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVG 468

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQ 443
           L P+ + YS+LI   C+ G L++   +Y+ MI  G  PD                     
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDH-------------------- 508

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                     F FN L+   C+  +  +  +    M    I P+ ++   LI G  S G 
Sbjct: 509 ----------FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGE 558

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A  +F +M K G  P   TY +++ GL KG ++       K ++    A D  + N 
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNT 618

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
           L+  + K  NLD A+ LFG++  R + PD  TY ++I G C     +I   F  +
Sbjct: 619 LITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKE 673



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 240/507 (47%), Gaps = 22/507 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA-- 172
           ++ LI+ ++  G   E++++F  M   G+  +    +     L+D       + L R   
Sbjct: 336 FNALIDGHISEGNFKEALKMFHMMEAKGLIGT----EVSYGVLLDGLCKNAEFDLARGFY 391

Query: 173 --MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M+  G CV    Y  +++GL + G ++ A  M  ++ + G  P+IVT + ++   C  
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRV 451

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G++  A  +   +  VG  PN + +STLI   C+   L++  ++Y  M+     PD   +
Sbjct: 452 GRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTF 511

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           ++L+  L KAG++ E  E +      G+  + V F  +++ Y   G+  +A   +D M  
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTK 571

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P   +Y  L+KGLC+ G L+ A      +         +  ++LI   CKSG L  
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDK 631

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQS-VRMTLIPNLFIFNTLM 460
             SL+  M++R + PD+   + LI+GL        A+ F  ++  R  L+PN  ++   +
Sbjct: 632 AVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFV 691

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG  +  +          M    +  DV+T   +I G +  G +     L F+M  +   
Sbjct: 692 DGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQG 751

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD-IAIYNVLLNMLIKECN-LDAAL 578
           P++ TY+ ++HG  K K++S    +++ M  +G+ PD +  Y+++L   I E N L+  L
Sbjct: 752 PNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILG--ICESNMLEIGL 809

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCS 605
           K+      RG+E D  T+N +I   C+
Sbjct: 810 KILKAFICRGVEVDRHTFNMLISKCCA 836



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 230/506 (45%), Gaps = 16/506 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L+  +   GK+  + ++   M   G  LSP+ V    L+   +   +  +  K+   
Sbjct: 301 YNTLLNGFSNEGKVLIARQLLNEMLTFG--LSPNHVTFNALIDGHISEGNFKEALKMFHM 358

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  L++GL +    + A   + ++ + G     +T   ++  LC NG 
Sbjct: 359 MEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  + + +   G  P++VT+S LIN FC+  +L+ A ++   +  + L P+ IIYS 
Sbjct: 419 LDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI    + G LKE   +    +  G   D   F+ ++ +    G V  A +    M + G
Sbjct: 479 LIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LPN +S+  LI G    G  ++A  +F ++      P+  TY SL+ G CK G L    
Sbjct: 539 ILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAE 598

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
               ++       D V+C+ LI     +G +  A+  F + V+ +++P+ F + +L+ G 
Sbjct: 599 KFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGL 658

Query: 464 CRLKRATDTVKLFMLMGMY--NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           CR K  T    LF        N+ P+ + +T  + G+   G   +      QM K GLT 
Sbjct: 659 CR-KGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTR 717

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           DV+T +A+I G  +   I     +   M      P++  YN+LL+   K  ++  +  L+
Sbjct: 718 DVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLY 777

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLN 607
             +   G+ PD +T  +II G C  N
Sbjct: 778 RSMILSGILPDKLTCYSIILGICESN 803



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/589 (21%), Positives = 238/589 (40%), Gaps = 90/589 (15%)

Query: 102  RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVD 159
            R++R  L   G  YS LI N  R+G + E++ I+  M   G   +PD      L++ L  
Sbjct: 463  RIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGN--TPDHFTFNVLVTSLCK 520

Query: 160  SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP---- 211
            +  V +  +  R M   G       ++ L+NG    G    AF +  ++ + G  P    
Sbjct: 521  AGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFT 580

Query: 212  -------------------------------NIVTCNKILKRLCINGQIGNASSLFDVLL 240
                                           + V CN ++  +C +G +  A SLF  ++
Sbjct: 581  YGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMV 640

Query: 241  LVGPKPNVVTFSTLINAFCKEAK------------------------------------L 264
                 P+  T+++LI+  C++ K                                     
Sbjct: 641  QRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQW 700

Query: 265  EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
            +  F     M ++ L  D++  + +IDG  + G++++ ++LL    ++    ++  ++ +
Sbjct: 701  KAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNIL 760

Query: 325  MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
            +  Y     V  +   Y  M+  G LP+ ++   +I G+C+   L     +    + R +
Sbjct: 761  LHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGV 820

Query: 385  EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQS 444
            E    T++ LI   C +G++   F + + M   G+  D   C  +++ L  +     FQ 
Sbjct: 821  EVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHR---FQE 877

Query: 445  VRMTL--------IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
             RM L         P    +  L++G CR+        +   M  + I P  +  + ++R
Sbjct: 878  SRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937

Query: 497  GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
             +A  G    A LL   MLK  L P + +++ ++H   K  N++  L +  +M   G+  
Sbjct: 938  ALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKL 997

Query: 557  DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            D+  YNVL+  L  + ++  A +LF ++   G   ++ TY  ++ G  S
Sbjct: 998  DLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILS 1046



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 103/481 (21%), Positives = 205/481 (42%), Gaps = 58/481 (12%)

Query: 118  LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
            LI    + G +D++V +F  M    I         L+S L             +    +G
Sbjct: 619  LITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 178  FCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
              V     Y   ++G+ + G  +  F+  +Q+ + G   ++VT N ++       ++G  
Sbjct: 679  NLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGY---SRMGKI 735

Query: 233  SSLFDVLLLVGPK---PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD-LIIYSI 288
                D+L  +G +   PN+ T++ L++ + K   +  +F LY  M+   ++PD L  YSI
Sbjct: 736  EKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSI 795

Query: 289  LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            ++ G+ ++  L+ G ++L   + RG+++D   F+ ++      G++  A    + M + G
Sbjct: 796  IL-GICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLG 854

Query: 349  FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
               +  +   ++  L +  R  E+  +  ++  + + P    Y  L++G C+ G ++  F
Sbjct: 855  ISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAF 914

Query: 409  SLYDNMIKRGLKPDAVVCSLLINGLM----GDALRFFFQSV-RMTLIPNLFIFNTLMDGC 463
             + + MI   + P  V  S ++  L      D      +S+ +M L+P +  F TLM   
Sbjct: 915  VVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLF 974

Query: 464  CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG-------------------------- 497
            C+    T+ ++L ++M    +K D++++ VLI G                          
Sbjct: 975  CKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANV 1034

Query: 498  ---------IASQGS-LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
                     I SQG+  S   ++   +L RG     IT  +  H +   + ISV  ++  
Sbjct: 1035 TTYKALVGGILSQGTEFSGTDIILKDLLARGF----ITAMSFNHMINFPQQISVNAYLKH 1090

Query: 548  L 548
            L
Sbjct: 1091 L 1091



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 106/239 (44%), Gaps = 13/239 (5%)

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRF 440
           PS+  +  LI  + + G ++D   ++  M   G  P    C+ ++  ++          F
Sbjct: 123 PSV--FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSF 180

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             + ++  + P++  FN L++  C       +  L   M      P ++T+  ++     
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           +G   +AI L   M  +G+  DV TY+ +IH L +    + G  + + M +  + P+   
Sbjct: 241 KGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVT 300

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           YN LLN    E  +  A +L  ++   GL P+ +T+N +I G+ S      +G FK  +
Sbjct: 301 YNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHIS------EGNFKEAL 353



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 142/330 (43%), Gaps = 6/330 (1%)

Query: 96   KTYNF-FRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM 154
            KT++  F +   + G     Y+ L+  Y +   +  S  ++  M   GI         ++
Sbjct: 737  KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSII 796

Query: 155  SCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRK----GVIENAFHMHRQVIQRGFV 210
              + +SN +    K+ +A   +G  V     N L+ K    G I  AF M   +   G  
Sbjct: 797  LGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGIS 856

Query: 211  PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
             +  TC+ I+  L  N +   +  +   +   G  P    +  L+N  C+   ++ AF +
Sbjct: 857  LDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVV 916

Query: 271  YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
               M+   + P  +  S ++  L K G+  E + LL + L   L   +  F+++M  +  
Sbjct: 917  KEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCK 976

Query: 331  IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
             G+V  A++    M N G   +++SY++LI GLC +G +  A  LF ++       ++ T
Sbjct: 977  NGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTT 1036

Query: 391  YSSLIDGFCKSGKLRDGFS-LYDNMIKRGL 419
            Y +L+ G    G    G   +  +++ RG 
Sbjct: 1037 YKALVGGILSQGTEFSGTDIILKDLLARGF 1066


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 221/438 (50%), Gaps = 11/438 (2%)

Query: 184 LMNGLLRKGVIENAFH-MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
           L++GL     I+ A   MH  +++    P+++  N I+   C   +I +A  + D +   
Sbjct: 98  LIHGLFTSKTIDKAIQVMH--ILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNK 155

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P++VT++ LI + C    L+ A +  N +++ +  P ++ Y+ILI+     G + E 
Sbjct: 156 GFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEA 215

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            +LL   L+  L+ D+  ++S++      G V RA Q    + + G+ P+VI+Y+IL++G
Sbjct: 216 MKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRG 275

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           L  QG+      L   ++ R  E +++TYS LI   C+ GK+ +G  L  +M K+GLKPD
Sbjct: 276 LLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPD 335

Query: 423 A-----VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
                 ++ +L   G +  A+      +    +P++  +NT++   C+ KRA + + +F 
Sbjct: 336 GYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFE 395

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            +G     P+  ++  +   + S G    A+ +  +ML +G+ PD ITY+++I  L +  
Sbjct: 396 KLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDG 455

Query: 538 NISVGLHMF--KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            +   + +     ME +   P +  YN++L  L K   +  A+++   + D+G  P+  T
Sbjct: 456 MVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETT 515

Query: 596 YNTIICGYCSLNSCLIDG 613
           Y  +I G      CL D 
Sbjct: 516 YTFLIEGI-GFGGCLNDA 532



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/428 (22%), Positives = 206/428 (48%), Gaps = 51/428 (11%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VY 181
           ID+++++   + + G    PDL+    +++    +N +   Y++   M+ KGF      Y
Sbjct: 108 IDKAIQVMHILENHG---HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTY 164

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             L+  L  +G++++A     Q+++    P +VT   +++   + G I  A  L D +L 
Sbjct: 165 NILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLE 224

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +  +P++ T++++I   C+E  +++AFQ+ + +      PD+I Y+IL+ GL   G+ + 
Sbjct: 225 INLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEA 284

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAY---------VGI--------------------- 331
           G EL+   + RG + +VV +S ++ +          VG+                     
Sbjct: 285 GYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIA 344

Query: 332 -----GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G V  A++  D M++ G +P++++Y+ ++  LC+Q R  EA  +F ++      P
Sbjct: 345 ALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSP 404

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFF 441
           +  +Y+S+      +G       +   M+ +G+ PD +  + LI     +G++ +A+   
Sbjct: 405 NASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELL 464

Query: 442 --FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              +       P++  +N ++ G C++ R +D +++   M     +P+  T+T LI GI 
Sbjct: 465 VDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIG 524

Query: 500 SQGSLSSA 507
             G L+ A
Sbjct: 525 FGGCLNDA 532



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 187/426 (43%), Gaps = 61/426 (14%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           NAI+    + N    A Q      N   SP+I     LI  L    M D A        +
Sbjct: 130 NAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSA--------L 181

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--V 150
           +F       +L +++       Y+ LIE  +  G IDE++++   M  + I L PD+   
Sbjct: 182 EFKN-----QLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEM--LEINLQPDMFTY 234

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             ++  +     V + +++  ++  KG+      Y  L+ GLL +G  E  + +   ++ 
Sbjct: 235 NSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVA 294

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           RG   N+VT + ++  +C +G++     L   +   G KP+   +  LI A CKE +++ 
Sbjct: 295 RGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDL 354

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE------------------------- 301
           A ++ ++M+    VPD++ Y+ ++  L K  R  E                         
Sbjct: 355 AIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFS 414

Query: 302 -----GNE-----LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ--TYDRMLNGGF 349
                G++     ++L  LD+G+  D + ++S++      G V  A++      M +   
Sbjct: 415 ALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSEC 474

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V+SY+I++ GLC+  R+ +A  +   ++ +   P+  TY+ LI+G    G L D   
Sbjct: 475 KPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARD 534

Query: 410 LYDNMI 415
           L   ++
Sbjct: 535 LATTLV 540



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/175 (20%), Positives = 76/175 (43%), Gaps = 6/175 (3%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           +Y+ ++    +  + DE++ IF  + ++G   +      + S L  +    +   +   M
Sbjct: 373 NYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEM 432

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHM--HRQVIQRGFVPNIVTCNKILKRLCING 227
             KG       Y  L++ L R G+++ A  +    ++      P++V+ N +L  LC   
Sbjct: 433 LDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVS 492

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           ++ +A  +   ++  G +PN  T++ LI        L  A  L   ++ MD + +
Sbjct: 493 RVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISE 547


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 237/490 (48%), Gaps = 37/490 (7%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG 175
           L+    R GK +ES+     M D G   +PD++   +L+    +S ++G+  ++   +  
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKG--YTPDVILCTKLIKGFFNSRNIGKATRVMEILER 132

Query: 176 KG---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
            G      Y  L++G ++   +ENA  +  ++  RGF+P++VT N ++   C  G++  A
Sbjct: 133 YGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLA 192

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             +F+ LL    +P V+T++ LI A   +  ++ A +L + M+   L PD + Y+ +I G
Sbjct: 193 LEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           + K   + +  ELL +   RG K D++ ++ ++   +  G      +    M++ G  PN
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V+++SILI  LC+ G++ EA  L   +  + L+P    Y  LI GFC+ G+L       +
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
            MI  G  PD V                               +NT+M G CR  +A   
Sbjct: 373 YMISDGCLPDIVN------------------------------YNTIMAGLCRTGKADQA 402

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           +++F  +      P+V ++  L   + S G    A+ +  ++L +G+ PD ITY+++I  
Sbjct: 403 LEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISC 462

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L +   +   + +   M+     P++  YN++L  L K    + A+++   +T++G +P+
Sbjct: 463 LCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPN 522

Query: 593 IITYNTIICG 602
             TY  +I G
Sbjct: 523 ETTYILLIEG 532



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 214/429 (49%), Gaps = 6/429 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N   R G    + +    ++ +G+ P+++ C K++K    +  IG A+ + ++L   G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            KP+V  ++ LI+ F K  +LE A ++ + M     +PD++ Y+I+I      G+L    
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           E+    L    +  V+ ++ +++A +  G +  A++  D ML+ G  P+ ++Y+ +I+G+
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++  + +A  L   +  R  +P ++TY+ L+      GK  +G  L   MI  G KP+ 
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 424 VVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  S+LI     +G + +A+          L P+ + ++ L+ G CR  R     +    
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      PD++ +  ++ G+   G    A+ +F ++ + G  P+V +Y+ +   L+   +
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
               L M   +   G+ PD   YN L++ L ++  +D A++L   +      P++++YN 
Sbjct: 434 RYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNI 493

Query: 599 IICGYCSLN 607
           I+ G C +N
Sbjct: 494 ILLGLCKVN 502



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 194/392 (49%), Gaps = 6/392 (1%)

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           K+L R C  G+   +    + ++  G  P+V+  + LI  F     + KA ++  ++ E 
Sbjct: 74  KLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEIL-ER 132

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              PD+  Y+ LI G  KA +L+  N +L     RG   DVV ++ ++ ++   G +  A
Sbjct: 133 YGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLA 192

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++ ++ +L     P VI+Y+ILI+     G +  A  L  ++L + LEP  LTY+++I G
Sbjct: 193 LEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPN 452
            CK   +   F L  ++  RG KPD +  ++L+  L+      +  +   + + +   PN
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +   + L+   CR  +  + V L   M    +KPD   +  LI G   +G L  A     
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            M+  G  PD++ Y+ I+ GL +       L +F+ ++  G  P+++ YN L + L    
Sbjct: 373 YMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG 432

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +   AL++  +L ++G++PD ITYN++I   C
Sbjct: 433 DRYRALEMILKLLNQGIDPDEITYNSLISCLC 464



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 185/402 (46%), Gaps = 38/402 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ +I ++   GK+D ++EIF  +  +     P ++    L+   +    +    KL   
Sbjct: 176 YNIMIGSFCSRGKLDLALEIFEEL--LKDNCEPTVITYTILIEATILDGGIDVAMKLLDE 233

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  ++ G+ ++ +++ AF + R +  RG  P+I+T N +L+ L   G+
Sbjct: 234 MLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGK 293

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
                 L   ++ +G KPNVVT S LI   C++ K+E+A  L   M E  L PD   Y  
Sbjct: 294 WSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDP 353

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI G  + GRL    E L   +  G   D+V ++++M      G   +A++ ++++   G
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV SY+ L   L   G    A  +  ++L + ++P  +TY+SLI   C+ G + +  
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L  +M                            QS R    PN+  +N ++ G C++ R
Sbjct: 474 ELLVDM----------------------------QSGRYR--PNVVSYNIILLGLCKVNR 503

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           A D +++   M     +P+  T+ +LI GI   G  + A+ L
Sbjct: 504 ANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 169/346 (48%), Gaps = 8/346 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCL 157
           F  L +D+       Y+ LIE  +  G ID ++++   M   G  L PD +    ++  +
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG--LEPDTLTYNAIIRGM 253

Query: 158 VDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
                V + ++L R++  +G       Y  L+  LL +G       +  ++I  G  PN+
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           VT + ++  LC +G++  A +L   +   G KP+   +  LI  FC+E +L+ A +    
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M+    +PD++ Y+ ++ GL + G+  +  E+     + G   +V  ++++  A    GD
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
             RA++   ++LN G  P+ I+Y+ LI  LC+ G + EA  L   +   R  P++++Y+ 
Sbjct: 434 RYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNI 493

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR 439
           ++ G CK  +  D   +   M ++G +P+     LLI G+    LR
Sbjct: 494 ILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLR 539



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 150/306 (49%), Gaps = 8/306 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ +I    +   +D++ E+   +S  G    PD++    L+  L+      +  KL   
Sbjct: 246 YNAIIRGMCKEMMVDKAFELLRSLSSRGC--KPDIITYNILLRTLLSRGKWSEGEKLISE 303

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       +  L+  L R G +E A ++ R + ++G  P+    + ++   C  G+
Sbjct: 304 MISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGR 363

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A+   + ++  G  P++V ++T++   C+  K ++A +++  + E+   P++  Y+ 
Sbjct: 364 LDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNT 423

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L   L+ +G      E++L  L++G+  D + ++S++      G V  A++    M +G 
Sbjct: 424 LFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           + PNV+SY+I++ GLC+  R  +A  +   +  +  +P+  TY  LI+G   SG   +  
Sbjct: 484 YRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAM 543

Query: 409 SLYDNM 414
            L +++
Sbjct: 544 ELANSL 549



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 4/173 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           +Y+ ++    R GK D+++E+F  + ++G   +      L S L  S    +  ++   +
Sbjct: 385 NYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKL 444

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             +G       Y  L++ L R G+++ A  +   +    + PN+V+ N IL  LC   + 
Sbjct: 445 LNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRA 504

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
            +A  +   +   G +PN  T+  LI          +A +L N +  M+ + +
Sbjct: 505 NDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISE 557


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 247/552 (44%), Gaps = 54/552 (9%)

Query: 75  LQSDMRDVASHVFDKMVIQFGKTYNFFRLF---RDSL---GDFGCDYSFL---IENYVRI 125
           L S+   + +  F    + F K  +F RL+    DSL   G+    +  +   + N+  I
Sbjct: 101 LASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEI 160

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVY 181
           G+++E+V +   M + G+  S   +  ++   V+   +     +   M  +G       Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           + ++ G  R G I+ A      +IQRGF+P+  TC  IL  LC NG +  A   F  ++ 
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G KPN++ F++LI+  CK+  +++AF++   M+     P++  ++ LIDGL K G  ++
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340

Query: 302 GNELLLTALDRGL-KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              L L  +     K +V  ++S++  Y     + RA   + RM   G  PNV +Y+ LI
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ G    A  L   +      P++ TY++ ID  CK  +  + + L +     GL+
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            D V  ++LI        +  AL FF +  +     ++ + N L+   CR K+  ++ +L
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F L+    + P   T+T +I     +G +  A+  F  M + G  PD  TY ++I GL K
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +                                   D A KL+  + DRGL P  +T
Sbjct: 581 KSMV-----------------------------------DEACKLYEAMIDRGLSPPEVT 605

Query: 596 YNTIICGYCSLN 607
             T+   YC  N
Sbjct: 606 RVTLAYEYCKRN 617



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 204/426 (47%), Gaps = 18/426 (4%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----C 179
           G ++ ++  F  M D+G    P+L+    L+  L    S+ Q +++   M   G+     
Sbjct: 266 GLVNRAIWYFRKMIDLG--FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRG-FVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            +  L++GL ++G  E AF +  ++++   + PN+ T   ++   C   ++  A  LF  
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G  PNV T++TLIN  CK     +A++L NLM +   +P++  Y+  ID L K  R
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
             E  ELL  A   GL+ D V ++ ++       D+ +A+  + RM   GF  ++   +I
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNI 503

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI   C+Q ++ E+  LF  V+   L P+  TY+S+I  +CK G +      + NM + G
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             PD+     LI+GL     + +A + +   +   L P      TL    C   +  D+ 
Sbjct: 564 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC---KRNDSA 620

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
              +L+   + K  + T   L+R + S+  +  A L F ++L++  + D +T +A     
Sbjct: 621 NAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 680

Query: 534 FK-GKN 538
            + GKN
Sbjct: 681 SESGKN 686



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 147/330 (44%), Gaps = 56/330 (16%)

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           +Y +  D L   G L++ +E               V   ++  +  IG +  AV     M
Sbjct: 129 LYLVTADSLLANGNLQKAHE---------------VMRCMLRNFSEIGRLNEAVGMVMDM 173

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
            N G  P+ I+ + +++   + G +  A  +F ++ +R + P   +Y  ++ G  + GK+
Sbjct: 174 QNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 233

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           ++       MI+RG  PD   C+L++     NGL+  A+ +F + + +            
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL------------ 281

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
                                    KP++I  T LI G+  +GS+  A  +  +M++ G 
Sbjct: 282 -----------------------GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMF-KLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
            P+V T++A+I GL K         +F KL+  +   P++  Y  ++    KE  L+ A 
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            LF ++ ++GL P++ TY T+I G+C   S
Sbjct: 379 MLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 9/186 (4%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI  + R  K+ ES  +F  +  +G+  + +    ++SC      +    K    M+  G
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563

Query: 178 FCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
            CV     Y  L++GL +K +++ A  ++  +I RG  P  VT   +    C      NA
Sbjct: 564 -CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA 622

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             L + L     K  + T  TL+   C E K+  A   +  ++E D   D +  +     
Sbjct: 623 MILLEPL---DKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA 679

Query: 293 LFKAGR 298
             ++G+
Sbjct: 680 CSESGK 685


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 231/496 (46%), Gaps = 41/496 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS---NSVGQYYKLCR 171
           Y  L+  YVR GK D  +  F  M   G         R +  LV +   + V +YY +  
Sbjct: 164 YRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVAL 223

Query: 172 AMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
               KGFC+  F     ++ L +   IE    +   + + G  P+I  CN  +  LC + 
Sbjct: 224 ---DKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHN 280

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ +A    + + + G  P+VVT++T++   C   +  +A +L+  M+   L PD++   
Sbjct: 281 RLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACG 340

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           +LI GL K+ ++ E  EL L  L   L+L+V ++++++  ++  G + +A +    M   
Sbjct: 341 VLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTN 400

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL-EPSLLTYSSLIDGFCKSGKLRD 406
           G  P+V++Y+I +   C  G + EA  L  ++ +  +  P   +Y+ ++ G CK+ +L  
Sbjct: 401 GCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDR 460

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
            F    + ++ G   D V C                              N L+D  C+ 
Sbjct: 461 AFGFVSDHMEVGGFCDIVSC------------------------------NILIDAFCKA 490

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           K+ +  +KLF  MG   I+ D +T+  LI G+   G    A  +F QMLK  + P+V  Y
Sbjct: 491 KKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLY 550

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + ++H L K         +F  M +  V+PDI  +N L+  L K      A+ LF  +T 
Sbjct: 551 NIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTA 610

Query: 587 RGLEPDIITYNTIICG 602
           RG+EPD +T+  +I G
Sbjct: 611 RGIEPDSLTFRYLISG 626



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 236/514 (45%), Gaps = 27/514 (5%)

Query: 69  QLIHVLLQSDMR----DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVR 124
            L  +LL   +R    D   H FD+MV    +             +FG DY+  I   V+
Sbjct: 162 SLYRILLSGYVRAGKFDSVIHTFDEMVTSGCR-------------EFGVDYNRFIGVLVK 208

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCV 180
               D   + ++   D G  L+     R +S L  S  +    +L   M   G       
Sbjct: 209 NCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWA 268

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
               ++ L +   + +A      +  RG  P++VT   ++  LC N Q   A  L++ ++
Sbjct: 269 CNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMV 328

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G KP++V    LI   CK  K+++AF+L   M+ ++L  ++ IY+ LI G  ++G + 
Sbjct: 329 RRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSIN 388

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL-PNVISYSIL 359
           +  +++      G + DVV ++  ++ Y   G +  A +  + M   G + P+  SY+ +
Sbjct: 389 KAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQM 448

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +KGLC+  +L  A G     +       +++ + LID FCK+ K+     L+  M  +G+
Sbjct: 449 LKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGI 508

Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + DAV    LINGL G      A   F Q ++  ++PN+ ++N ++   C+  +     K
Sbjct: 509 QADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQK 568

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F+ M    + PD+IT   LI  +        AI LF  M  RG+ PD +T+  +I GL 
Sbjct: 569 IFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLL 628

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           +    +    +++ M  NG+  D  + + L++M 
Sbjct: 629 EEGKATQAYEVWEYMLENGIILDRDVSDRLISMF 662



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 152/376 (40%), Gaps = 76/376 (20%)

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM------------------ 344
           +E L     +G+ L   ++  ++  YV  G     + T+D M                  
Sbjct: 146 SEFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGV 205

Query: 345 -----------------LNGGFLPNVISYSILIKGLCQQGR--LVE-------------- 371
                            L+ GF     +YS  I  LCQ  R  LVE              
Sbjct: 206 LVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPD 265

Query: 372 --ACGLFGQVL-----------------IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             AC ++   L                 IR   P ++TY++++   C + +  +   L++
Sbjct: 266 IWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWE 325

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M++RGLKPD V C +LI GL     + +A     + + + L  N+ I+N L+ G  R  
Sbjct: 326 EMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSG 385

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL-TPDVITY 526
                 K+  +M     +PDV+T+ + +    + G +  A  L  +M   G+  PD  +Y
Sbjct: 386 SINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSY 445

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + ++ GL K   +             G   DI   N+L++   K   + +ALKLF ++  
Sbjct: 446 NQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGY 505

Query: 587 RGLEPDIITYNTIICG 602
           +G++ D +TY T+I G
Sbjct: 506 KGIQADAVTYGTLING 521


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 239/503 (47%), Gaps = 23/503 (4%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ---------YYK 168
           ++ N+   GK+ E+V +   M + G+  S     + ++C++D  +VG          + +
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPS----TQTLNCVLDV-AVGMGLVEIAENMFVE 214

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +C+         ++ ++      G +  A      +++RGF+ +  TC  I+   C  G 
Sbjct: 215 MCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGY 274

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +      F  ++ +G  PNV+ F+ LIN  CK+  +++AF+L   M+     P++  ++ 
Sbjct: 275 VNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334

Query: 289 LIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           LIDGL K G  ++   L L  +   G K +V  ++++++ Y     + RA     RM   
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +PN  +Y+ LI G C+ G  V A  L   +      P++ TY+++IDG CK G L + 
Sbjct: 395 GLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA 454

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           + L + +   GL+ D V  ++L++          +L FF + +++   P++  + TL+  
Sbjct: 455 YRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIST 514

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            CR K+  ++ +LF       + P   T+T +I G    G+ S A+ LF +M   G  PD
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            ITY A+I GL K   +    +++  M   G++P       L     K+ +   A+ +  
Sbjct: 575 SITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLD 634

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
           +L  R     I T NT++   CS
Sbjct: 635 RLEKRQW---IRTVNTLVRKLCS 654



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 206/420 (49%), Gaps = 19/420 (4%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           + +I+ + + G ++  V  F  M +MG  L+P+++    L++ L    S+ Q ++L   M
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMG--LAPNVINFTALINGLCKQGSIKQAFELLEEM 320

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQ 228
             +G+      +  L++GL +KG  E AF +  ++++  G+ PN+ T   ++   C   +
Sbjct: 321 VRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDK 380

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L   +   G  PN  T++TLI+  CK     +A++L +LM +    P++  Y+ 
Sbjct: 381 LNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNA 440

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +IDGL K G L E   LL      GL+ D V ++ +M  +    D  R++  +++ML  G
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG 500

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F P++ SY+ LI   C+Q ++ E+  LF + +   L P+  TY+S+I G+C+ G      
Sbjct: 501 FTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAV 560

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M   G  PD++    LI+GL     + DA   +   +   L P      TL    
Sbjct: 561 KLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEY 620

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C   +  D+     ++     +  + T   L+R + S+G L  A L F ++L +   P+V
Sbjct: 621 C---KKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDK--EPNV 675



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 6/283 (2%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G +  AV     M N G +P+  + + ++      G +  A  +F ++  R + P  +++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVR 446
             ++   C  G++ +     + M++RG   D   C+L+I+     G +   + +F++ V 
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
           M L PN+  F  L++G C+        +L   M     KP+V THT LI G+  +G    
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347

Query: 507 AILLFFQMLKR-GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           A  LF ++++  G  P+V TY+A+I+G  K   ++    +   M+  G+ P+   Y  L+
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           +   K  N   A +L   +   G  P+I TYN II G C   S
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGS 450



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 44/279 (15%)

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           +V A  L G    + LE +      ++  F ++GKL++  ++   M  +GL P     + 
Sbjct: 138 IVSATALIGN---KNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNC 194

Query: 429 LIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT----------- 472
           +++     GL+  A   F +  +  + P+   F  ++  CC + R  +            
Sbjct: 195 VLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERG 254

Query: 473 ------------------------VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
                                   V  F  M    + P+VI  T LI G+  QGS+  A 
Sbjct: 255 FIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAF 314

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF-KLMERNGVAPDIAIYNVLLNM 567
            L  +M++RG  P+V T++ +I GL K         +F KL+  +G  P++  Y  ++N 
Sbjct: 315 ELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             KE  L+ A  L  ++ ++GL P+  TY T+I G+C +
Sbjct: 375 YCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKV 413



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 124/280 (44%), Gaps = 13/280 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ + ++G    + E+   M   G   SP++     ++  L    S+ + Y+L   
Sbjct: 403 YTTLIDGHCKVGNFVRAYELMDLMGKEG--FSPNIYTYNAIIDGLCKKGSLDEAYRLLNK 460

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +   G       Y  LM+   R+     +     ++++ GF P+I +   ++   C   Q
Sbjct: 461 VSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQ 520

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  +  LF+  + +G  P   T++++I  +C+      A +L+  M      PD I Y  
Sbjct: 521 MKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGA 580

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL K  +L +   L    +D+GL    V   ++   Y    D   A+   DR+    
Sbjct: 581 LISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
           ++  V   + L++ LC +G+L  A   F ++L +  EP++
Sbjct: 641 WIRTV---NTLVRKLCSEGKLDMAALFFHKLLDK--EPNV 675


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 220/462 (47%), Gaps = 15/462 (3%)

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFL 184
           +GK+DE++E+F  +   G  L  DL+ R +S    +    +  K+ + M  +       L
Sbjct: 12  VGKLDEALELFHSLVSDGCGLPADLLVRELS---KAGRAEECLKVVKLMLDRQQLRERHL 68

Query: 185 MN----GLLRKGVIENAFHMHRQVIQ-RGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +N     L +  +I+ A    +++   RG V N V+ N ++   C   +I  A  LF  +
Sbjct: 69  VNITIDSLCKSDMIDKAESWFQELKDFRGLV-NTVSYNILINAFCKTKRIDEAIQLFGEM 127

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+  T++TLI   C+  +L +A Q Y  ++        I Y+IL+DG  KA R+
Sbjct: 128 KAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRV 187

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  ELL   + RG  +    ++ ++D     G +  A   ++RM   G  P  +++++L
Sbjct: 188 PEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVL 247

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+  R+  A  +F   L     PS++  S L+DGFCK G + + + +++ M  RG 
Sbjct: 248 IDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGC 307

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+ V C++LINGL     +  A   F + V+    P++  ++T MDG CR  R     +
Sbjct: 308 TPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQ 367

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF-FQMLKRGLTPDVITYSAIIHGL 533
           +  ++      PDV+ +T LI G+ S G L  A  +F   M   G  P+  T + +++G 
Sbjct: 368 VLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGF 427

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
                +     +F+     GV PD   ++ + N   K    D
Sbjct: 428 GLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTEGWD 469



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 216/489 (44%), Gaps = 73/489 (14%)

Query: 95  GKTYNFFRLFRDSLGDFGC--DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           GK      LF   + D GC      L+    + G+ +E +++   M D        LV  
Sbjct: 13  GKLDEALELFHSLVSD-GCGLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNI 71

Query: 153 LMSCLVDSNSVGQ---YYKLCRAMRGKGFCV-YEFLMNGLLRKGVIENAFHMHRQVIQRG 208
            +  L  S+ + +   +++  +  RG    V Y  L+N   +   I+ A  +  ++   G
Sbjct: 72  TIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPG 131

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             P+  T N ++  LC   ++G A   ++ LL  G   + +T++ L++ FCK  ++ +A 
Sbjct: 132 CAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAV 191

Query: 269 QLYNLM----------------------------------MEMDLV-PDLIIYSILIDGL 293
           +L N +                                  ME D V P  + +++LIDGL
Sbjct: 192 ELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGL 251

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            KA R+    E+  + L+ G    VV+ S +MD +   G V  A + ++ M N G  PN 
Sbjct: 252 CKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPND 311

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           +S +ILI GLC+  RL +A  +F +V+ R+ +P ++TYS+ +DG C++ ++     +   
Sbjct: 312 VSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCM 371

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           ++ +G  PD V+ + LI+GL                              C L R  +  
Sbjct: 372 LVDKGGTPDVVMYTALISGL------------------------------CSLGRLDEAR 401

Query: 474 KLFML-MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           K+F + M      P+  T  VL+ G    G L  A  LF + ++RG+ PD  T+SA+ + 
Sbjct: 402 KVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANN 461

Query: 533 LFKGKNISV 541
             K +   +
Sbjct: 462 TAKTEGWDI 470



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 188/390 (48%), Gaps = 10/390 (2%)

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC  G++  A  LF  L+  G     +    L+    K  + E+  ++  LM++   + +
Sbjct: 9   LCHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
             + +I ID L K+  + +         D RGL ++ V ++ +++A+     +  A+Q +
Sbjct: 66  RHLVNITIDSLCKSDMIDKAESWFQELKDFRGL-VNTVSYNILINAFCKTKRIDEAIQLF 124

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             M   G  P+  +Y+ LI GLC+  RL EA   + ++L      S +TY+ L+DGFCK+
Sbjct: 125 GEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKA 184

Query: 402 GKLRDGFSLYDNMIKRG-----LKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIF 456
            ++ +   L + ++ RG        + ++ +L   G + +A  FF +  +  + P    F
Sbjct: 185 DRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTF 244

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
             L+DG C+  R     ++F         P V+  + L+ G    G +  A  +F  M  
Sbjct: 245 TVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTN 304

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           RG TP+ ++ + +I+GL K K +S    +F+ + +    PD+  Y+  ++ L +   +D 
Sbjct: 305 RGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQ 364

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           A ++   L D+G  PD++ Y  +I G CSL
Sbjct: 365 ARQVLCMLVDKGGTPDVVMYTALISGLCSL 394



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 159/327 (48%), Gaps = 10/327 (3%)

Query: 91  VIQFGKTYNFF-RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           V + G+   F+ RL     G     Y+ L++ + +  ++ E+VE+   +   G  ++   
Sbjct: 149 VERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAP 208

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVI 205
              ++  L     + +       M   G       +  L++GL +   +  A  +    +
Sbjct: 209 YNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYL 268

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           + G  P++V C+ ++   C  G +  A  +F+++   G  PN V+ + LIN  CK  +L 
Sbjct: 269 ESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLS 328

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A +++  +++    PD++ YS  +DGL +A R+ +  ++L   +D+G   DVV++++++
Sbjct: 329 QAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALI 388

Query: 326 DAYVGIGDVGRAVQTYD-RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
                +G +  A + ++  M   G  PN  + ++L+ G    GRL EA  LF + + R +
Sbjct: 389 SGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGV 448

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +P   T+S++ +   K+    +G+ +Y
Sbjct: 449 QPDCRTFSAMANNTAKT----EGWDIY 471



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 119/295 (40%), Gaps = 56/295 (18%)

Query: 363 LCQQGRLVEA-----------CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           LC  G+L EA           CGL   +L+R L               K+G+  +   + 
Sbjct: 9   LCHVGKLDEALELFHSLVSDGCGLPADLLVRELS--------------KAGRAEECLKVV 54

Query: 412 DNMIKRGLKPDAVVCSLLINGL----MGDALRFFFQSVR-MTLIPNLFIFNTLMDGCCRL 466
             M+ R    +  + ++ I+ L    M D    +FQ ++    + N   +N L++  C+ 
Sbjct: 55  KLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKT 114

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           KR  + ++LF  M      P   T+  LI G+     L  A   + ++L  G     ITY
Sbjct: 115 KRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITY 174

Query: 527 SAIIHGLFKGKNISVGLHMF-KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           + ++ G  K   +   + +  +L+ R GV    A YN +++ L K+  +  A   F ++ 
Sbjct: 175 NILVDGFCKADRVPEAVELLNELVARGGVVTS-APYNCIIDTLFKKGKIHEAELFFNRME 233

Query: 586 DRGLEPDIITYNTIICGYCSLN------------------------SCLIDGYFK 616
             G+ P  +T+  +I G C  N                        SCL+DG+ K
Sbjct: 234 KDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCK 288


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/575 (24%), Positives = 264/575 (45%), Gaps = 16/575 (2%)

Query: 45  TNNPTPAIQFFKWT-HNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMV----IQFGKTYN 99
           + +P P  Q  +    N V+     + + VLLQ +  + A  V   ++      F     
Sbjct: 35  STDPEPESQPEQAPPTNPVTGDEKLRNLRVLLQQNRIETARGVLSSLLRSDSTPFASPKE 94

Query: 100 FFRLFRDSLGDFGCDYSFLIENYV--RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
            F  F  S      D+S+L+ + +      I E+ ++F  + + GIY S D +  L+  L
Sbjct: 95  LFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154

Query: 158 VDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGV----IENAFHMHRQVIQRGFVPNI 213
           V +        +   +    F   +F+    ++  V    +     +  ++      P++
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSV 214

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
              N ++  LC   ++ +A  LFD +L     P+++T++TLI+ +CK    EK+F++   
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER 274

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           M    + P LI ++ L+ GLFKAG +++   +L    D G   D   FS + D Y     
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
              A+  Y+  ++ G   N  + SIL+  LC++G++ +A  + G+ + + L P+ + Y++
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMT 448
           +IDG+C+ G L       + M K+G+KPD +  + LI      G M +A +   +     
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + P++  +N L+ G  R         +   M      P+V+++  LI  +     L  A 
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           ++   M  RG++P V  Y+ +I G      I       K M + G+  ++  YN L++ L
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
                L  A  L  +++ +GL+PD+ TYN++I GY
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/549 (26%), Positives = 257/549 (46%), Gaps = 74/549 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   +  +++++ ++F  M          L +RL+  L+  N++   Y  C+A  
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEM----------LARRLLPSLITYNTLIDGY--CKAGN 264

Query: 175 -GKGFCVYE---------------FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
             K F V E                L+ GL + G++E+A ++ +++   GFVP+  T + 
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           +      N +   A  +++  +  G K N  T S L+NA CKE K+EKA ++    M   
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGD---- 333
           LVP+ +IY+ +IDG  + G L  G  + + A+++ G+K D + ++ ++  +  +G+    
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLV-GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443

Query: 334 -----------VGRAVQTYD--------------------RMLNGGFLPNVISYSILIKG 362
                      V  +V+TY+                     M + G +PNV+SY  LI  
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC+  +L+EA  +   +  R + P +  Y+ LIDG C  GK+ D F     M+K+G++ +
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + LI+GL     + +A     +  R  L P++F +N+L+ G          + L+ 
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    IKP + T+ +LI     +G +     LF +M    L PD++ Y+ ++H      
Sbjct: 624 EMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHG 679

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           ++    ++ K M    +  D   YN L+   +K   L     L  ++  R +EP+  TYN
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739

Query: 598 TIICGYCSL 606
            I+ G+C +
Sbjct: 740 IIVKGHCEV 748



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 191/404 (47%), Gaps = 5/404 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P+  +   +L  L    Q     ++F  +L    +P+   +   I A  K + + K
Sbjct: 138 EGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK 197

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
             +L+N M    + P + IY++LIDGL K  R+ +  +L    L R L   ++ +++++D
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y   G+  ++ +  +RM      P++I+++ L+KGL + G + +A  +  ++      P
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFF 441
              T+S L DG+  + K      +Y+  +  G+K +A  CS+L+N L  +     A    
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + +   L+PN  I+NT++DG CR             M    +KPD + +  LIR     
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G + +A     +M  +G++P V TY+ +I G  +         + K ME NG  P++  Y
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             L+N L K   L  A  +   + DRG+ P +  YN +I G CS
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCS 541



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 224/483 (46%), Gaps = 11/483 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S L + Y    K + ++ ++    D G+ ++      L++ L     + +  ++     
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG      +Y  +++G  RKG +  A      + ++G  P+ +  N +++R C  G++ 
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA    + + L G  P+V T++ LI  + ++ + +K F +   M +   +P+++ Y  LI
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + L K  +L E   +     DRG+   V +++ ++D     G +  A +    ML  G  
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            N+++Y+ LI GL   G+L EA  L  ++  + L+P + TY+SLI G+  +G ++   +L
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDAL----RFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           Y+ M + G+KP      LLI+    + +    R F +   M+L P+L ++N ++      
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGE---MSLKPDLLVYNGVLHCYAVH 678

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                   L   M   +I  D  T+  LI G    G L     L  +M  R + P+  TY
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + I+ G  + K+       ++ M+  G   D+ I N L++ L +E     A  +  ++  
Sbjct: 739 NIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNG 798

Query: 587 RGL 589
           R L
Sbjct: 799 RML 801



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 5/276 (1%)

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           +  A   +  + N G  P+  S ++L+  L +  +      +F  +L     PS   Y  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
            I    K   +  G  L++ M    + P   + ++LI+GL     M DA + F + +   
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           L+P+L  +NTL+DG C+      + K+   M   +I+P +IT   L++G+   G +  A 
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +  +M   G  PD  T+S +  G    +     L +++    +GV  +    ++LLN L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            KE  ++ A ++ G+   +GL P+ + YNT+I GYC
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 10/354 (2%)

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           F    +L  AF L +  ++ D     ++ S+L++   ++  + E  +L     + G+   
Sbjct: 89  FASPKELFSAFSLSSPSLKHDF--SYLLLSVLLN---ESKMISEAADLFFALRNEGIYPS 143

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
               + ++D  V        +  +  +L   F P+   Y   I+   +   + +   LF 
Sbjct: 144 SDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFN 203

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MG 435
           ++   R+ PS+  Y+ LIDG CK  ++ D   L+D M+ R L P  +  + LI+G    G
Sbjct: 204 RMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAG 263

Query: 436 DALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
           +  + F    RM    + P+L  FNTL+ G  +     D   +   M      PD  T +
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           +L  G +S     +A+ ++   +  G+  +  T S +++ L K   I     +       
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           G+ P+  IYN +++   ++ +L  A      +  +G++PD + YN +I  +C L
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 244/520 (46%), Gaps = 31/520 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+   +  G++     I + M   G Y + ++   L+     S      YKL + M 
Sbjct: 310 YRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMI 369

Query: 175 G----KGFCVYEFLMNGLLR------KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                 G+ +Y   +  +          ++E A   + +++  G V N V  +   + LC
Sbjct: 370 KCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLC 429

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G+   A  +   ++  G  P+  T+S +I   C  +K+EKAF L+  M +  +VP + 
Sbjct: 430 GAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVY 489

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ILID   KAG +++        L      +VV ++S++ AY+    V  A + ++ M
Sbjct: 490 TYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMM 549

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV----------LIRRLE------PSL 388
           L  G  PNV++Y+ LI G C+ G++ +AC ++ ++          +  +L+      P++
Sbjct: 550 LLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNI 609

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
           +TY +L+DG CK+ ++ +   L D M   G +P+ +V   LI+G      + +A   F +
Sbjct: 610 ITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVK 669

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                  PNL+ +++L++   + KR    +K+   M   +  P+V+ +T +I G+   G 
Sbjct: 670 MSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGK 729

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A  L  +M + G  P+VITY+A+I G  K   I   L +++ M   G AP+   Y V
Sbjct: 730 TEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRV 789

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           L+N       LD A +L  ++        I +Y  II G+
Sbjct: 790 LINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF 829



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 212/450 (47%), Gaps = 58/450 (12%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G  + AF +  +++ +GFVP+  T +K++  LC   ++  A  LF+ +   G  P+V T+
Sbjct: 432 GKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTY 491

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + LI++FCK   +++A   ++ M+  +  P+++ Y+ LI    KA ++ + N+L    L 
Sbjct: 492 TILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLL 551

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML----------------NGGFLPNVIS 355
            G K +VV +++++D +   G + +A Q Y RM                 N    PN+I+
Sbjct: 552 EGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIIT 611

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  L+ GLC+  R+ EA  L   + +   EP+ + Y +LIDGFCK+GKL +   ++  M 
Sbjct: 612 YGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMS 671

Query: 416 KRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +RG  P+    S LIN L  +      L+   + +  +  PN+ I+  ++DG C++ +  
Sbjct: 672 ERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTE 731

Query: 471 DTVKLFMLM---GMY--------------------------------NIKPDVITHTVLI 495
           +  +L + M   G Y                                   P+ IT+ VLI
Sbjct: 732 EAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLI 791

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
               S G L  A  L  +M +      + +Y  II G  +    S+GL     +  N   
Sbjct: 792 NHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGL--LDELSENESV 849

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           P  ++Y +L++  IK   L+ AL L  +++
Sbjct: 850 PVESLYRILIDNFIKAGRLEGALNLLEEIS 879



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 156/637 (24%), Positives = 281/637 (44%), Gaps = 88/637 (13%)

Query: 41  NLIKTNNPTPAIQFFKW-------THN-----------CVSSPNIAQLIHVLLQSDMRDV 82
           NL+K  +P   ++FF W       +H            C ++ N  ++ H  L   +RD 
Sbjct: 108 NLVK--HPEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQ-IRDD 164

Query: 83  ASHVFDKMV---IQFGKTYNFFRLFRDSLG---DFG-----CDYSFLIENYVRIGKIDES 131
              +  K++   IQ       + +  + LG   DFG       Y+ LI+ ++R  K+D +
Sbjct: 165 DRELLRKLLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTA 224

Query: 132 VEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY-YKLCRAMR-GKGFCV--------- 180
             +   MS+ G  +             D  ++G + Y LC+A R G    +         
Sbjct: 225 FLVHREMSNSGFRM-------------DGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPD 271

Query: 181 ---YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y  +++GL    + + A  +  ++     +PN+VT   +L      GQ+G    +  
Sbjct: 272 TVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILS 331

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
           +++  G  PN   F++L++A+CK      A++L+  M++    P  ++Y+I I  +    
Sbjct: 332 MMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNE 391

Query: 298 RLKEGNELLLTA-------LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            L  G++LL  A       LD G+ L+ V  S+      G G   +A +    M++ GF+
Sbjct: 392 ELP-GSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFV 450

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +YS +I  LC   ++ +A  LF ++    + PS+ TY+ LID FCK+G ++   + 
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +D M++    P+ V  + LI+  +      DA + F   +     PN+  +  L+DG C+
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCK 570

Query: 466 LKRATDTVKLFMLM---------GMY-------NIKPDVITHTVLIRGIASQGSLSSAIL 509
             +     +++  M          MY          P++IT+  L+ G+     +  A  
Sbjct: 571 AGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHE 630

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           L   M   G  P+ I Y A+I G  K   +     +F  M   G  P++  Y+ L+N L 
Sbjct: 631 LLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLF 690

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           KE  LD  LK+  ++ +    P+++ Y  +I G C +
Sbjct: 691 KEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKV 727



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 215/465 (46%), Gaps = 50/465 (10%)

Query: 60  NCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS 116
           NC  +PN+     LIH  L++     A+ +F+ M+++ G   N               Y+
Sbjct: 518 NC--TPNVVTYTSLIHAYLKARKVFDANKLFEMMLLE-GSKPNVV------------TYT 562

Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL----CRA 172
            LI+ + + G+ID++ +I+A M                   ++S+ +  Y+KL    C  
Sbjct: 563 ALIDGHCKAGQIDKACQIYARMQGD----------------IESSDIDMYFKLDDNDCET 606

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
                   Y  L++GL +   +E A  +   +   G  PN +  + ++   C  G++ NA
Sbjct: 607 ---PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENA 663

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             +F  +   G  PN+ T+S+LIN+  KE +L+   ++ + M+E    P+++IY+ +IDG
Sbjct: 664 QEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDG 723

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
           L K G+ +E   L+L   + G   +V+ +++++D +  IG + + ++ Y  M + G  PN
Sbjct: 724 LCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPN 783

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
            I+Y +LI   C  G L EA  L  ++        + +Y  +I+GF +  +      L D
Sbjct: 784 FITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNR--EFITSIGLLD 841

Query: 413 NMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQ--SVRMTLIPNLFIFNTLMDGCCR 465
            + +    P   +  +LI+     G +  AL    +  S     + N +++ +L++    
Sbjct: 842 ELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSH 901

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
             +     +L+  M   N+ P++ T   LI+G+   G    A+ L
Sbjct: 902 ASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 246/519 (47%), Gaps = 34/519 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI  Y    K D+++ +   M      L   +  +L++ L+  + + +  +L   + 
Sbjct: 280 FTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEIS 339

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  +++G  + G ++ A  + + + + G  PN  T N ++  L  + ++ 
Sbjct: 340 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 399

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +L   +   G  PNV+T++TL+   C E   + AF+L+ +M +  L PD   Y++L 
Sbjct: 400 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 459

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L KAGR +E    ++    +G+ L  V +++++D +   G+   A    +RM++ G  
Sbjct: 460 DALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCT 516

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +YS+L+  LC+Q RL EA  +  Q+ +R ++ ++  Y+ LID   + GK      +
Sbjct: 517 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 576

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           Y+ M   G KP A   ++ IN     G + DA     +  R  + P++  +N L+DGC  
Sbjct: 577 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 636

Query: 466 L---KRATDTVKLFMLMGMYNIKPDVITHTVL-----------IRGIASQG-----SLSS 506
           +    RA  T+K    M   + +P+  T+ +L           +R + + G      L  
Sbjct: 637 MGYIDRAFSTLKR---MVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 693

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
              L  +M+K GL P V TYS++I G  K   +     +   M   G++P+  IY +L+ 
Sbjct: 694 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 753

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
                   + AL     +++ G +P + +Y  ++ G C+
Sbjct: 754 CCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 792



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 220/461 (47%), Gaps = 38/461 (8%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+ GL     +  A  +   + + G  PN+     ++  LC +G++G+A  LFD + 
Sbjct: 141 YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 200

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+V+T++ +I  + K  ++  A ++  LM +    PD   Y+ LI GL    + +
Sbjct: 201 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTE 259

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  ELL  A+  G    VV F+++++ Y        A++  ++M++     ++  +  LI
Sbjct: 260 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 319

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             L ++ RL EA  L  ++    L P+++TY+S+IDG+CKSGK+     +   M + G +
Sbjct: 320 NSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ 379

Query: 421 PDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+A   + L+ GL+ D     A+    +  +  +IPN+  + TL+ G C      +  +L
Sbjct: 380 PNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL 439

Query: 476 FMLMGMYNIKPD-----VIT---------------------------HTVLIRGIASQGS 503
           F +M    +KPD     V+T                           +T LI G +  G+
Sbjct: 440 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGN 499

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A  L  +M+  G TPD  TYS ++H L K K ++  L +   M   G+   I  Y +
Sbjct: 500 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 559

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L++ +++E   D A +++ ++T  G +P   TY   I  YC
Sbjct: 560 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 600



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 228/497 (45%), Gaps = 9/497 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+       + +++ +F  M   G   +      L+S L  S  VG    L  AM 
Sbjct: 141 YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 200

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  ++ G  + G + +A  +   + + G  P+  T N ++  LC + +  
Sbjct: 201 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTE 259

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L +  +  G  P VVTF+ LIN +C   K + A ++ N MM      DL ++  LI
Sbjct: 260 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 319

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + L K  RLKE  ELL      GL  +V+ ++S++D Y   G V  A++    M   G  
Sbjct: 320 NSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ 379

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN  +Y+ L+ GL +  +L +A  L  ++    + P+++TY++L+ G C      + F L
Sbjct: 380 PNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL 439

Query: 411 YDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           ++ M + GLKPD    ++L + L   G A   +   VR  +      + TL+DG  +   
Sbjct: 440 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGN 499

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 L   M      PD  T++VL+  +  Q  L+ A+ +  QM  RG+   +  Y+ 
Sbjct: 500 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 559

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I  + +         M+  M  +G  P    Y V +N   KE  L+ A  L  ++   G
Sbjct: 560 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 619

Query: 589 LEPDIITYNTII--CGY 603
           + PD++TYN +I  CG+
Sbjct: 620 VAPDVVTYNILIDGCGH 636



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 204/429 (47%), Gaps = 6/429 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y F +  L R  + E    ++ Q++Q G +P+ VT N ++K  C  G +  A   F +LL
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G +P   T + L+  +C+  +L KA  L+ +M  M    +   Y+ILI GL  A  ++
Sbjct: 96  EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +   L L     G   +V  F+ ++      G VG A   +D M   G +P+V++Y+ +I
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G  + GR+ +A  +   +      P   TY++LI G C   K  +   L +N +K G  
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFT 274

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P  V  + LING        DALR   + +      +L +F  L++   +  R  +  +L
Sbjct: 275 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 334

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              +    + P+VIT+T +I G    G +  A+ +   M + G  P+  TY+++++GL K
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            K +   + +   M+++G+ P++  Y  LL     E + D A +LF  +   GL+PD   
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 454

Query: 596 YNTIICGYC 604
           Y  +    C
Sbjct: 455 YAVLTDALC 463



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 208/489 (42%), Gaps = 21/489 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+ Y + GK+D ++E+   M   G   +      LM  LV    + +   L   M+
Sbjct: 350 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 409

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G   +   +NAF +   + Q G  P+      +   LC   + G
Sbjct: 410 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---KAG 466

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   +  ++  G     V ++TLI+ F K    + A  L   M++    PD   YS+L+
Sbjct: 467 RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLL 526

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K  RL E   +L     RG+K  +  ++ ++D  +  G    A + Y+ M + G  
Sbjct: 527 HALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHK 586

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +Y++ I   C++GRL +A  L  ++    + P ++TY+ LIDG    G +   FS 
Sbjct: 587 PSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 646

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M+    +P+     LL+  L+   L  + +SV  + + NL   +             
Sbjct: 647 LKRMVGASCEPNYWTYCLLLKHLLKGNLA-YVRSVDTSGMWNLIELDI------------ 693

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
            T +L   M  + + P V T++ LI G    G L  A LL   M  +GL+P+   Y+ +I
Sbjct: 694 -TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 752

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
                 K     L    +M   G  P +  Y +L+  L  E + +    LF  L + G  
Sbjct: 753 KCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYN 812

Query: 591 PDIITYNTI 599
            D + +  +
Sbjct: 813 HDEVAWKIL 821



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 83/168 (49%)

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           R + Q V+  L+P+   +NT++   C+    T   + F L+    ++P+  T   L+ G 
Sbjct: 54  RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGY 113

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G L  A  LF  M   G   +  +Y+ +I GL   K +   L +F +M+R+G +P++
Sbjct: 114 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNV 173

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             +  L++ L K   +  A  LF  +   G+ P ++TYN +I GY  L
Sbjct: 174 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKL 221



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 137/358 (38%), Gaps = 55/358 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ + + G  D +  +   M D G          L+  L     + +   +   M 
Sbjct: 487 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 546

Query: 175 GKGF-CV---YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G  C    Y  L++ +LR+G  ++A  M+ ++   G  P+  T    +   C  G++ 
Sbjct: 547 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 606

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF---------------------- 268
           +A  L   +   G  P+VVT++ LI+       +++AF                      
Sbjct: 607 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 666

Query: 269 -----------------------------QLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                                        QL   M++  L P +  YS LI G  KAGRL
Sbjct: 667 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 726

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E   LL     +GL  +  +++ ++          +A+     M   GF P + SY +L
Sbjct: 727 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL 786

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           + GLC +G   +   LF  +L        + +  L DG  K+G +   F +   M KR
Sbjct: 787 VVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 844


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 239/502 (47%), Gaps = 11/502 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI+ Y + G++D ++ +   M    +  S      L+S L  +  + +   +   ++
Sbjct: 139 FNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIK 198

Query: 175 GKGFC----VYEFLMNGLLRKGV-IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             GF      Y  + +GLL+       A  ++R+ I +G   +  TC+ +L  LC  G++
Sbjct: 199 CNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKV 258

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  +   L+  G  P  V ++T++N +C+   +++A      M    L P+ I ++ +
Sbjct: 259 EKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSV 318

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ID   +   + +  E +   + +G+   V  ++ ++D Y  +    R  Q  + M   G 
Sbjct: 319 IDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGE 378

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            PNVISY  LI  LC+ G+++EA  +   ++ R + P+   Y+ LIDG C  GKLR+   
Sbjct: 379 KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALR 438

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL--MG---DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
            +D M K G+    V  + LI GL  MG   +A   FF        P++  +N+L+ G  
Sbjct: 439 FFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYS 498

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
               +   ++L+  M    +KP + T   LI G + +G +     LF +ML+  L+PD +
Sbjct: 499 NAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRV 557

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            Y+A+IH   +  ++     + K M   GV PD   YN L+   +KE  L     L   +
Sbjct: 558 VYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDM 617

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
             +GL P+  TY+ +I G+C L
Sbjct: 618 KAKGLIPEADTYSLLIQGHCDL 639



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 234/481 (48%), Gaps = 10/481 (2%)

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGL 188
           E++ +M   G   S   V+ ++  LV+S        L + M G GF     VY   M   
Sbjct: 17  ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
           ++ G ++ A  +   + +R  VPN+   N ++  LC   +I +A  LF  + +    PN 
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           VTF+TLI+ +CK  +++ A  L   M +  + P +I ++ L+ GL KA R++E   +L  
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGD-VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
               G   D   +S + D  +   D  G A+  Y   +  G   +  + SIL+ GLC++G
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEG 256

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           ++ +A  +   ++   L P  + Y+++++G+C+ G +       + M  RGL+P+ +  +
Sbjct: 257 KVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFN 316

Query: 428 LLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            +I+      ++  A  +  + V   + P++  +N L+DG  RL   +   ++   M   
Sbjct: 317 SVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEEN 376

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
             KP+VI++  LI  +   G +  A ++   M+ RG+ P+   Y+ +I G      +   
Sbjct: 377 GEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREA 436

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L  F  M +NG+   I  YN L+  L K   L  A ++F  +T  G  PD+ITYN++I G
Sbjct: 437 LRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISG 496

Query: 603 Y 603
           Y
Sbjct: 497 Y 497



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 205/421 (48%), Gaps = 10/421 (2%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           G  +Y  ++NG  + G ++ A     Q+  RG  PN +  N ++ + C    I  A    
Sbjct: 276 GEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWV 335

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             ++  G  P+V T++ LI+ + +     + FQ+   M E    P++I Y  LI+ L K 
Sbjct: 336 KKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKD 395

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G++ E   +L   + RG+  +  +++ ++D    +G +  A++ +D M   G    +++Y
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTY 455

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LIKGLC+ G+L EA  +F  +      P ++TY+SLI G+  +G  +    LY+ M K
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKK 515

Query: 417 RGLKPDAVVCSLLINGLMGDALRF----FFQSVRMTLIPNLFIFNTLM---DGCCRLKRA 469
            GLKP       LI+G   + ++     F + ++M L P+  ++N ++        +++A
Sbjct: 516 LGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKA 575

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
               K  + MG   ++PD  T+  LI G   +G LS    L   M  +GL P+  TYS +
Sbjct: 576 FSLQKEMVDMG---VRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLL 632

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G    K+ +     ++ M  NG  P++ I N L   L K+  L  A  +  ++   G+
Sbjct: 633 IQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGM 692

Query: 590 E 590
           +
Sbjct: 693 D 693



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 217/456 (47%), Gaps = 12/456 (2%)

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           L   +  G    L R   GKG  +  +    L+NGL ++G +E A  + + +++ G VP 
Sbjct: 217 LKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPG 276

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
            V  N I+   C  G +  A    + +   G +PN + F+++I+ FC+   ++KA +   
Sbjct: 277 EVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVK 336

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M+   + P +  Y+ILIDG  +        ++L    + G K +V+ + S+++     G
Sbjct: 337 KMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDG 396

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
            +  A      M+  G LPN   Y++LI G C  G+L EA   F ++    +  +++TY+
Sbjct: 397 KILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYN 456

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDA---LRFFFQSVRM 447
           SLI G CK GKL++   ++  +   G  PD +  + LI+G    G++   L  +    ++
Sbjct: 457 SLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKL 516

Query: 448 TLIPNLFIFNTLMDGCCRLK-RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
            L P +  F+ L+ GC +   +  +T  LF  M   N+ PD + +  +I      G +  
Sbjct: 517 GLKPTINTFHPLISGCSKEGIKLKET--LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQK 574

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L  +M+  G+ PD  TY+++I G  K   +S    +   M+  G+ P+   Y++L+ 
Sbjct: 575 AFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQ 634

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
                 + + A   + ++ + G  P++   N +  G
Sbjct: 635 GHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTG 670



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 200/423 (47%), Gaps = 19/423 (4%)

Query: 200 MHRQVI-------QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
           MH QV        Q G +P+      I++ L  + +  N   LF  ++ +G +P+ + + 
Sbjct: 11  MHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYG 70

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
             + A  K   L+ A +L+  M    +VP++ +Y++LI GL K  R+++  +L      R
Sbjct: 71  RAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVR 130

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            L  + V F++++D Y   G+V  A+   +RM      P++I+++ L+ GLC+  R+ EA
Sbjct: 131 NLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEA 190

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG----FSLYDNMIKRGLKPDAVVCSL 428
             +  ++      P   TYS + DG  KS    DG      LY   I +G+K D   CS+
Sbjct: 191 RCMLNEIKCNGFVPDGFTYSIIFDGLLKSD---DGAGAALDLYREAIGKGVKIDNYTCSI 247

Query: 429 LINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           L+NGL  +     A       V   L+P   I+NT+++G C++      +     M    
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           ++P+ I    +I        +  A     +M+ +G+ P V TY+ +I G  +    S   
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            + + ME NG  P++  Y  L+N L K+  +  A  +   +  RG+ P+   YN +I G 
Sbjct: 368 QILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGS 427

Query: 604 CSL 606
           C++
Sbjct: 428 CTV 430



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 187/363 (51%), Gaps = 10/363 (2%)

Query: 257 AFCKEAKLE-KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           + C E+K+  +  +LY+ M +   +P      ++++ L ++ +     +L    +  G +
Sbjct: 4   SVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFR 63

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D +V+   M A V +GD+  A++ ++ M     +PNV  Y++LI GLC++ R+ +A  L
Sbjct: 64  PDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKL 123

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
           FG++ +R L P+ +T+++LIDG+CK+G++     L + M K  ++P  +  + L++GL  
Sbjct: 124 FGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCK 183

Query: 436 ----DALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKR-ATDTVKLFMLMGMYNIKPDVI 489
               +  R     ++    +P+ F ++ + DG  +    A   + L+       +K D  
Sbjct: 184 ARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNY 243

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T ++L+ G+  +G +  A  +   +++ GL P  + Y+ I++G  +  ++   +   + M
Sbjct: 244 TCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQM 303

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY---CSL 606
           E  G+ P+   +N +++   +   +D A +   ++  +G+ P + TYN +I GY   C  
Sbjct: 304 ESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVF 363

Query: 607 NSC 609
           + C
Sbjct: 364 SRC 366



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 161/345 (46%), Gaps = 11/345 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+ Y R+       +I   M + G    P+++    L++CL     + +   + R 
Sbjct: 350 YNILIDGYGRLCVFSRCFQILEEMEENG--EKPNVISYGSLINCLCKDGKILEAEMVLRD 407

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G+G      +Y  L++G    G +  A     ++ + G    IVT N ++K LC  G+
Sbjct: 408 MVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGK 467

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F ++   G  P+V+T+++LI+ +      +K  +LY  M ++ L P +  +  
Sbjct: 468 LKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHP 527

Query: 289 LIDGLFKAG-RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           LI G  K G +LKE   L    L   L  D VV+++++  Y   G V +A      M++ 
Sbjct: 528 LISGCSKEGIKLKE--TLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDM 585

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+  +Y+ LI G  ++G+L E   L   +  + L P   TYS LI G C        
Sbjct: 586 GVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGA 645

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPN 452
           +  Y  M++ G  P+  +C+ L  GL  D      QS+   +I N
Sbjct: 646 YVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIAN 690


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 200/402 (49%), Gaps = 5/402 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  PN+ T N ++  LC         S+  ++  +G +P++VTF+T++N  C E  + +A
Sbjct: 56  GVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQA 115

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +  + + +M    D      +I+GL K G        L    ++   LDV  +S+V+D 
Sbjct: 116 IRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDG 175

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G V  A+  + +M   G  PN+ +Y+ LI GLC   R  EA  L   ++ + + P 
Sbjct: 176 LCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 235

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFF 442
           + T++ +   F K+G +    S++  M   G++ + V  + +I        M DA+  F 
Sbjct: 236 VQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFD 295

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             +R   +PN+  +N+L+ G C  K     +     M    + PDV+T + LI G    G
Sbjct: 296 LMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAG 355

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
              +A  LFF M K G  PD+ T + I+ GLFK    S  + +F+ +E+     DI IY+
Sbjct: 356 KPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYS 415

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           ++LN +     L+ AL+LF  L+ +G++ D++TYN +I G C
Sbjct: 416 IILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLC 457



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 199/388 (51%), Gaps = 5/388 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++NGL + G    A    +++ ++    ++   + ++  LC +G +  A  LF  +   G
Sbjct: 137 IINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKG 196

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +PN+ T++ LI+  C   + ++A  L   MM   ++PD+  ++++     K G +    
Sbjct: 197 IQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAK 256

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +       G++ +VV ++S++ A+  +  +  A++ +D M+  G LPN+++Y+ LI G 
Sbjct: 257 SIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGW 316

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+   + +A    G+++   L+P ++T+S+LI GFCK+GK      L+  M K G  PD 
Sbjct: 317 CETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDL 376

Query: 424 VVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
             C+++++GL       +A+  F +  +M    ++ I++ +++G C   +  D ++LF  
Sbjct: 377 QTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSY 436

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +    +K DV+T+ ++I G+  +G L  A  L  +M + G  PD  TY+  + GL +   
Sbjct: 437 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYE 496

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           IS        M+  G   +     +L+N
Sbjct: 497 ISKSTKYLMFMKGKGFRANATTTKLLIN 524



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 168/373 (45%), Gaps = 30/373 (8%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A   +  ++ + P P V  F+ L     K      A  L   M  + + P++  ++I+I+
Sbjct: 10  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVIN 69

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L +      G  +L      G++  +V F+++++     G+V +A++  D + + G+  
Sbjct: 70  CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYES 129

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  +   +I GLC+ G    A     ++  +     +  YS+++DG CK G + +   L+
Sbjct: 130 DRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLF 189

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             M  +G++                              PNLF +N L+ G C   R  +
Sbjct: 190 SQMTGKGIQ------------------------------PNLFTYNCLIHGLCNFDRWKE 219

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              L   M    I PDV T  V+       G +S A  +F  M   G+  +V+TY++II 
Sbjct: 220 AAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIG 279

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
                  +   + +F LM R G  P+I  YN L++   +  N++ A+   G++ + GL+P
Sbjct: 280 AHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDP 339

Query: 592 DIITYNTIICGYC 604
           D++T++T+I G+C
Sbjct: 340 DVVTWSTLIGGFC 352



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 191/424 (45%), Gaps = 15/424 (3%)

Query: 104 FRDSLGDFGCDYS-----FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
           F D L D G +        +I    ++G    ++     M +    L       ++  L 
Sbjct: 118 FVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLC 177

Query: 159 DSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
               V +   L   M GKG       Y  L++GL      + A  +   ++++G +P++ 
Sbjct: 178 KDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQ 237

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N I  R    G I  A S+F  +  +G + NVVT++++I A C   +++ A ++++LM
Sbjct: 238 TFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLM 297

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +    +P+++ Y+ LI G  +   + +    L   ++ GL  DVV +S+++  +   G  
Sbjct: 298 IRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKP 357

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A + +  M   G LP++ + +I++ GL +     EA  LF ++     +  ++ YS +
Sbjct: 358 VAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSII 417

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTL 449
           ++G C SGKL D   L+  +  +G+K D V  +++IN     GL+ DA     +      
Sbjct: 418 LNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGC 477

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            P+   +N  + G  R    + + K  M M     + +  T  +LI   ++    + A  
Sbjct: 478 PPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANKE-NRAFQ 536

Query: 510 LFFQ 513
           +F Q
Sbjct: 537 VFLQ 540



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 127/263 (48%), Gaps = 5/263 (1%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PNV +++I+I  LC+    V    + G +    +EPS++T++++++G C  G +   
Sbjct: 56  GVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQA 115

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
               D++   G + D      +INGL        AL +  +        ++  ++ ++DG
Sbjct: 116 IRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDG 175

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+     + + LF  M    I+P++ T+  LI G+ +      A  L   M+++G+ PD
Sbjct: 176 LCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 235

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V T++ I     K   IS    +F  M   G+  ++  YN ++        +  A+++F 
Sbjct: 236 VQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFD 295

Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
            +  +G  P+I+TYN++I G+C 
Sbjct: 296 LMIRKGCLPNIVTYNSLIHGWCE 318



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 134/283 (47%), Gaps = 5/283 (1%)

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
           +  V  A+  Y +M+     P V  +++L   + +      A  L   +    ++P++ T
Sbjct: 4   VKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVST 63

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           ++ +I+  C+      GFS+   M K G++P  V  + ++NGL     +  A+RF     
Sbjct: 64  HNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLK 123

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
            M    + +    +++G C++  ++  +     M   N   DV  ++ ++ G+   G + 
Sbjct: 124 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVF 183

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ LF QM  +G+ P++ TY+ +IHGL           +   M R G+ PD+  +NV+ 
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIA 243

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
              +K   +  A  +F  +   G+E +++TYN+II  +C LN 
Sbjct: 244 GRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQ 286


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 209/425 (49%), Gaps = 17/425 (4%)

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           +  L+R+G ++ A  +    +     P+  TC  ++K+L  +G+   A  +     L   
Sbjct: 72  LRSLVRRGELDEALRL----VGSARRPDAGTCAALIKKLSASGRTAEARRV-----LAAC 122

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
            P+V+ ++ ++  +C   +L+ A +L   + EM + PD   Y+ LI GL   GR      
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALA 179

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +L   L R    DVV ++ +++A        +A++  D M + G  P++++Y++++ G+C
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           Q+GR+ +A      +     EP+ ++Y+ ++ G C + +  D   L   M ++G  P+ V
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299

Query: 425 VCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             ++LI+     GL+  AL    Q  +    PN   +N L+   C+ K+    +    LM
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                 PD++++  L+  +   G +  A+ L  Q+  +G  P +I+Y+ +I GL K    
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              L +   M   G+ PDI  Y+ +   L +E  ++ A++ FG++ D G+ P+ + YN I
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479

Query: 600 ICGYC 604
           I G C
Sbjct: 480 ILGLC 484



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 232/478 (48%), Gaps = 17/478 (3%)

Query: 119 IENYVRIGKIDESVEIF--AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
           + + VR G++DE++ +   A   D G   +  L+++L +    S    +  ++  A  G 
Sbjct: 72  LRSLVRRGELDEALRLVGSARRPDAGTCAA--LIKKLSA----SGRTAEARRVLAAC-GP 124

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
               Y  ++ G    G ++ A    R V +    P+  T N +++ LC  G+  NA ++ 
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAA---RRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVL 181

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           D +L     P+VVT++ L+ A CK +  ++A +L + M +    PD++ Y+++++G+ + 
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GR+ +  E L      G + + V ++ V+           A +    M   G  PNV+++
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           ++LI  LC++G +  A  +  Q+      P+ L+Y+ L+  FCK  K+    +  D M+ 
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361

Query: 417 RGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           RG  PD V     + +L  +G +  A+    Q       P L  +NT++DG  +  +  +
Sbjct: 362 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 421

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++L   M    ++PD+IT++ +  G+  +  +  AI  F ++   G+ P+ + Y+AII 
Sbjct: 422 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 481

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           GL K +     + +F  M  NG  P+ + Y +L+  L  E  +  A  L  +L  RG+
Sbjct: 482 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 193/397 (48%), Gaps = 8/397 (2%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+++  N ++   C  GQ+  A  L   + +   +P+  T++TLI   C   +   A  +
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
            + M+    VPD++ Y+IL++   K    K+  +LL    D+G   D+V ++ V++    
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G V  A++    + + G  PN +SY+I++KGLC   R  +A  L G++  +   P+++T
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           ++ LI   C+ G +     + + + K G  P+++  + L++       M  A+ F    V
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
                P++  +NTL+   CR       V+L   +      P +I++  +I G+   G   
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 420

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ L  +M+ +GL PD+ITYS I  GL +   I   +  F  ++  G+ P+  +YN ++
Sbjct: 421 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 480

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             L K     +A+ LF  +   G  P+  TY  +I G
Sbjct: 481 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 517



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 163/338 (48%), Gaps = 36/338 (10%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           D + D GC      Y+ ++    + G++D+++E    +   G                + 
Sbjct: 217 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG---------------CEP 261

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           N+V                 Y  ++ GL      E+A  +  ++ Q+G  PN+VT N ++
Sbjct: 262 NTVS----------------YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 305

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC  G +  A  + + +   G  PN ++++ L++AFCK+ K++KA    +LM+     
Sbjct: 306 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 365

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           PD++ Y+ L+  L ++G +    ELL    D+G    ++ +++V+D     G    A++ 
Sbjct: 366 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 425

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
            + M++ G  P++I+YS +  GLC++ R+ +A   FG+V    + P+ + Y+++I G CK
Sbjct: 426 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 485

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL 438
             +      L+  MI  G  P+    ++LI GL  + L
Sbjct: 486 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 523



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 7/206 (3%)

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           + G+L +   L    +    +PDA  C+ LI  L         + V     P++  +N +
Sbjct: 77  RRGELDEALRL----VGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAM 132

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           + G C   +     +L   M    ++PD  T+  LIRG+  +G  ++A+ +  +ML+R  
Sbjct: 133 VAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRC 189

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PDV+TY+ ++    K       + +   M   G  PDI  YNV++N + +E  +D A++
Sbjct: 190 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE 249

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCS 605
               L   G EP+ ++YN ++ G C+
Sbjct: 250 FLKNLPSYGCEPNTVSYNIVLKGLCT 275



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 34/251 (13%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
           N +++ L +     PA++  +       +PN      L+H   +    D A    D MV 
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361

Query: 93  QFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           +                  GC      Y+ L+    R G++D +VE+   + D G   +P
Sbjct: 362 R------------------GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC--AP 401

Query: 148 DLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMH 201
            L+    ++  L  +    +  +L   M  KG       Y  +  GL R+  IE+A    
Sbjct: 402 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 461

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            +V   G  PN V  N I+  LC   +  +A  LF  ++  G  PN  T++ LI     E
Sbjct: 462 GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYE 521

Query: 262 AKLEKAFQLYN 272
             +++A  L +
Sbjct: 522 GLIKEARDLLD 532


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 228/500 (45%), Gaps = 45/500 (9%)

Query: 118  LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
            ++ N+  IG+++E+V +   M + G+  S   +  ++   V+   +     +   M  +G
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 178  F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                   Y+ ++ G  R G I+ A      +IQRGF+P+  TC  IL  LC NG +  A 
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 234  SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
              F  ++ +G KPN++ F++LI+  CK+  +++AF++   M+     P++  ++ LIDGL
Sbjct: 874  WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 294  FKAGRLKEGNELLLTALDRGL-KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
             K G  ++   L L  +     K +V  ++S++  Y     + RA   + RM   G  PN
Sbjct: 934  CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993

Query: 353  VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
            V +Y+ LI G C+ G    A  L   +      P++ TY++ ID  CK  +  + + L +
Sbjct: 994  VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053

Query: 413  NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
                 GL+ D V  ++LI        +  AL FF +  +     ++ + N L+   CR K
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 1113

Query: 468  RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
            +  ++ +LF L+    + P   T+T +I     +G +  A+  F  M + G  PD  TY 
Sbjct: 1114 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 1173

Query: 528  AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++I GL                                    K+  +D A KL+  + DR
Sbjct: 1174 SLISGL-----------------------------------CKKSMVDEACKLYEAMIDR 1198

Query: 588  GLEPDIITYNTIICGYCSLN 607
            GL P  +T  T+   YC  N
Sbjct: 1199 GLSPPEVTRVTLAYEYCKRN 1218



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 204/426 (47%), Gaps = 18/426 (4%)

Query: 126  GKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----C 179
            G ++ ++  F  M D+G    P+L+    L+  L    S+ Q +++   M   G+     
Sbjct: 867  GLVNRAIWYFRKMIDLG--FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 924

Query: 180  VYEFLMNGLLRKGVIENAFHMHRQVIQRG-FVPNIVTCNKILKRLCINGQIGNASSLFDV 238
             +  L++GL ++G  E AF +  ++++   + PN+ T   ++   C   ++  A  LF  
Sbjct: 925  THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 984

Query: 239  LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
            +   G  PNV T++TLIN  CK     +A++L NLM +   +P++  Y+  ID L K  R
Sbjct: 985  MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 1044

Query: 299  LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
              E  ELL  A   GL+ D V ++ ++       D+ +A+  + RM   GF  ++   +I
Sbjct: 1045 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNI 1104

Query: 359  LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            LI   C+Q ++ E+  LF  V+   L P+  TY+S+I  +CK G +      + NM + G
Sbjct: 1105 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 1164

Query: 419  LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
              PD+     LI+GL     + +A + +   +   L P      TL    C   +  D+ 
Sbjct: 1165 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC---KRNDSA 1221

Query: 474  KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
               +L+   + K  + T   L+R + S+  +  A L F ++L++  + D +T +A     
Sbjct: 1222 NAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 1281

Query: 534  FK-GKN 538
             + GKN
Sbjct: 1282 SESGKN 1287



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 146/330 (44%), Gaps = 56/330 (16%)

Query: 285  IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            +Y +  D L   G L++ +E               V   ++  +  IG +  AV     M
Sbjct: 730  LYLVTADSLLANGNLQKAHE---------------VMRCMLRNFSEIGRLNEAVGMVMDM 774

Query: 345  LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
             N G  P+ I+ + +++   + G +  A  +F ++ +R + P   +Y  ++ G  + GK+
Sbjct: 775  QNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 834

Query: 405  RDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
            ++       MI+RG  PD   C+L++     NGL+  A+ +F + + +   PNL  F   
Sbjct: 835  QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINF--- 891

Query: 460  MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
                                            T LI G+  +GS+  A  +  +M++ G 
Sbjct: 892  --------------------------------TSLIDGLCKKGSIKQAFEMLEEMVRNGW 919

Query: 520  TPDVITYSAIIHGLFKGKNISVGLHMF-KLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             P+V T++A+I GL K         +F KL+  +   P++  Y  ++    KE  L+ A 
Sbjct: 920  KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 979

Query: 579  KLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
             LF ++ ++GL P++ TY T+I G+C   S
Sbjct: 980  MLFSRMKEQGLFPNVNTYTTLINGHCKAGS 1009



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 9/186 (4%)

Query: 118  LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
            LI  + R  K+ ES  +F  +  +G+  + +    ++SC      +    K    M+  G
Sbjct: 1105 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 1164

Query: 178  FCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
             CV     Y  L++GL +K +++ A  ++  +I RG  P  VT   +    C      NA
Sbjct: 1165 -CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA 1223

Query: 233  SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
              L + L     K  + T  TL+   C E K+  A   +  ++E D   D +  +     
Sbjct: 1224 MILLEPL---DKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA 1280

Query: 293  LFKAGR 298
              ++G+
Sbjct: 1281 CSESGK 1286


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 222/460 (48%), Gaps = 44/460 (9%)

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
            L R G    A  + R + + G VP+ V    ++  LC  G +  A++L + +LL+G   
Sbjct: 184 ALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 243

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           +V TF  ++   C   ++ +A +L + MM    +P ++ Y  L+ GL +  +  E   +L
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
                R  +L+VV+F++V+   +  G +  A + Y+ M   G  P+  +YSIL+ GLC+ 
Sbjct: 304 ----GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL------- 419
           GR+  A  L  ++  +   P+++TY+ ++  FCK+G   D  +L + M  +GL       
Sbjct: 360 GRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419

Query: 420 ----------------------------KPD-----AVVCSLLINGLMGDALRFFFQSVR 446
                                        PD      ++  L  N  M +A   F   + 
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE 479

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             ++ N   +NT++    R  R  D V+L   M ++    DV+++  LI+ +   G++  
Sbjct: 480 EGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           +++L  +M ++G+ P+ ++Y+ +I  L K + +   L + K M   G+APDI  YN L+N
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLIN 599

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            L K   + AAL L  +L +  + PDIITYN +I  +C +
Sbjct: 600 GLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 639



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 230/471 (48%), Gaps = 17/471 (3%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV--- 180
           R+G+ +E++ +   M+  G      L Q ++  L D   V +   L   M   G      
Sbjct: 187 RLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVN 246

Query: 181 -YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            ++ ++ G+   G +  A  +  +++ +G +P ++T   +L+ LC   Q   A ++   +
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 306

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
               P+ NVV F+T+I     E KL +A +LY  M      PD   YSIL+ GL K GR+
Sbjct: 307 ----PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYV--GIGDVGRAVQTYDRMLNGGFLPNVISYS 357
                LL     +G   +VV ++ V+ ++   G+ D  RA+   + M   G   N   Y+
Sbjct: 363 SSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL--LEEMSAKGLTLNSQGYN 420

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I  LC+ GR+ EA GL  ++  +   P + +Y+++I   C + ++ +   +++N+++ 
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480

Query: 418 GLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G+  + +     + +LL +G   DA+R   + +      ++  +N L+   C+      +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           + L   M    IKP+ +++ +LI  +  +  +  A+ L  QML +GL PD++TY+ +I+G
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           L K   +   L++ + +    V PDI  YN+L++   K   LD A  L  +
Sbjct: 601 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 203/483 (42%), Gaps = 73/483 (15%)

Query: 197 AFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-KPNVVTFSTL 254
           A H+  Q+ +R G  P+  + N +L  L       +A +L+  ++      P   TF   
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
             A C+  +  +A  L   M     VPD ++Y  +I  L   G + E   LL   L  G 
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ--------- 365
             DV  F  V+    G+G V  A +  DRM+  G +P V++Y  L++GLC+         
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 366 ----------------------QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
                                 +G+L EA  L+  + ++  +P   TYS L+ G CK G+
Sbjct: 302 MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 361

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNT 458
           +     L   M K+G  P+ V  ++++     NG+  D      +     L  N   +N 
Sbjct: 362 ISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 421

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDV------------------------------ 488
           ++   C+  R  + + L   M      PD+                              
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481

Query: 489 -----ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
                IT+  +I  +   G    A+ L  +M+  G + DV++Y+ +I  + K  N+   L
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            + + M   G+ P+   YN+L++ L KE  +  AL+L  Q+ ++GL PDI+TYNT+I G 
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601

Query: 604 CSL 606
           C +
Sbjct: 602 CKM 604



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 215/465 (46%), Gaps = 24/465 (5%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHV--FD 88
           + N+A A+L  + +      A+ +    H       + +   +L +  +   A+ V  FD
Sbjct: 190 RANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFD 249

Query: 89  KMV---IQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSD 140
            +V      G+     RL  D +   GC      Y FL++   R+ + DE+  +   + +
Sbjct: 250 DVVRGMCGLGRVREAARLV-DRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE 308

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIEN 196
           + + L   ++     CL +   + +  +L   M  KG       Y  LM+GL + G I +
Sbjct: 309 LNVVLFNTVIG---GCLAEGK-LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISS 364

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  + R++ ++GF PN+VT   +L   C NG   +  +L + +   G   N   ++ +I 
Sbjct: 365 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           A CK+ ++++A  L   M      PD+  Y+ +I  L    +++E   +    L+ G+  
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVA 484

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           + + +++++ A +  G    AV+    M+  G   +V+SY+ LIK +C+ G +  +  L 
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 544

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            ++  + ++P+ ++Y+ LI   CK  ++RD   L   M+ +GL PD V  + LINGL   
Sbjct: 545 EEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM 604

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
             M  AL    +     + P++  +N L+   C+++   D   L 
Sbjct: 605 GWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 146/296 (49%), Gaps = 8/296 (2%)

Query: 93  QFGKTYNFFRLFRD----SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           + G+  +  RL R+            Y+ ++ ++ + G  D++  +   MS  G+ L+  
Sbjct: 358 KLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQV 204
               ++  L     + +   L + MR +G     C Y  ++  L     +E A HM   +
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           ++ G V N +T N I+  L  +G+  +A  L   ++L G   +VV+++ LI A CK+  +
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 537

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           +++  L   M E  + P+ + Y+ILI  L K  R+++  EL    L++GL  D+V ++++
Sbjct: 538 DRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL 597

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           ++    +G +  A+   +++ N    P++I+Y+ILI   C+   L +A  L  + +
Sbjct: 598 INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 233/490 (47%), Gaps = 11/490 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE--- 182
           G+I +++ +   M   G    P +   ++             ++   +  +G C  +   
Sbjct: 173 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG-CALDVGN 231

Query: 183 --FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
              ++N +  +G ++ A H+ R +   G  P++V+ N +LK LC+  + G    L + ++
Sbjct: 232 CNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV 291

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +   PN+VTF+TLI+  C+    E+  ++   M+E    PD+ +Y+ +IDG+ K G L+
Sbjct: 292 RMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLE 351

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
             +E+L      GLK +VV +++++             +    M +     + ++++IL+
Sbjct: 352 VAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILV 411

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              CQ G +     L  Q+L     P ++TY+++I+GFCK G + +   L  +M   G K
Sbjct: 412 DFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCK 471

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ +  ++++ GL       DA     Q ++     N   FNTL++  C+       ++L
Sbjct: 472 PNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIEL 531

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M +    PD+I+++ +I G+   G    A+ L   M+ +G++P+ I YS+I   L +
Sbjct: 532 LKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSR 591

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              I+  + MF  ++   +  D  +YN +++ L K    + A++    +   G  P+  T
Sbjct: 592 EGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNEST 651

Query: 596 YNTIICGYCS 605
           Y  +I G  S
Sbjct: 652 YTILIRGLAS 661



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 195/431 (45%), Gaps = 16/431 (3%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++ G  R G +E+A  +   V      PN  T   +++ LC  G+I +A ++ D + 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P    +  ++ A C+      A ++   +       D+   +++++ +   G + 
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   LL      G + DVV +++V+         G   +  + M+     PN+++++ LI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC+ G       +  Q++     P +  Y+++IDG CK G L     + + M   GLK
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF---------IFNTLMDGCCRLKRATD 471
           P+ V  + L+ GL   A R+        L+  +F          FN L+D  C+      
Sbjct: 367 PNVVCYNTLLKGLC-SAERWEETE---ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDR 422

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++L   M  +   PDVIT+T +I G   +G +  A++L   M   G  P+ I+Y+ ++ 
Sbjct: 423 VIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 482

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL   +       +   M + G   +   +N L+N L K+  ++ A++L  Q+   G  P
Sbjct: 483 GLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 542

Query: 592 DIITYNTIICG 602
           D+I+Y+T+I G
Sbjct: 543 DLISYSTVIDG 553



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 129/301 (42%), Gaps = 45/301 (14%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIF 135
           DV  ++      Q G       L    L + GC      Y+ +I  + + G IDE+V + 
Sbjct: 404 DVTFNILVDFFCQNGLVDRVIELLEQML-EHGCMPDVITYTTVINGFCKEGLIDEAVMLL 462

Query: 136 AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRK 191
             M+  G   +      ++  L  +        L   M  +G       +  L+N L +K
Sbjct: 463 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 522

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G++E A  + +Q++  G  P++++ + ++  L   G+   A  L +V++  G  PN + +
Sbjct: 523 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 582

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S++ +A  +E ++ K  Q+++ + +  +  D ++Y+ +I  L K G  +           
Sbjct: 583 SSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE----------- 631

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
                                   RA++    M++ G +PN  +Y+ILI+GL  +G + E
Sbjct: 632 ------------------------RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKE 667

Query: 372 A 372
           A
Sbjct: 668 A 668



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 3/149 (2%)

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N ++ G CR  +     +L        + P+  T+  ++R + ++G ++ A+ +  +M 
Sbjct: 130 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           +RG  P    Y  I+    +G      + + + +   G A D+   N++LN +  + ++D
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            AL L   L   G EPD+++YN ++ G C
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLC 275



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/258 (18%), Positives = 96/258 (37%), Gaps = 36/258 (13%)

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
           GG     +  S LI+ LC  GR  EA      +        ++ Y++++ G+C++G+L  
Sbjct: 89  GGGEGGSVRLSSLIRSLCAAGRTAEA---ARALSAAGGGAGVVAYNAMVAGYCRAGQLES 145

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
              L                                 +  + + PN + +  ++   C  
Sbjct: 146 ARRL---------------------------------AAAVPVPPNAYTYFPVVRALCAR 172

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  D + +   M      P    + V++      G   SA+ +   +  RG   DV   
Sbjct: 173 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC 232

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +++ +    ++   LH+ + +   G  PD+  YN +L  L          +L  ++  
Sbjct: 233 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 292

Query: 587 RGLEPDIITYNTIICGYC 604
               P+I+T+NT+I   C
Sbjct: 293 MACPPNIVTFNTLISYLC 310


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 248/519 (47%), Gaps = 34/519 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI  Y    K D+++ +   M      L   +  +L++ L+  + + +  +L   + 
Sbjct: 395 FTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEIS 454

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  +++G  + G ++ A  + + + + G  PN  T N ++  L  + ++ 
Sbjct: 455 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 514

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +L   +   G  PNV+T++TL+   C E   + AF+L+ +M +  L PD   Y++L 
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L KAGR +E    ++    +G+ L  V +++++D +   G+   A    +RM++ G  
Sbjct: 575 DALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCT 631

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +YS+L+  LC+Q RL EA  +  Q+ +R ++ ++  Y+ LID   + GK      +
Sbjct: 632 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 691

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           Y+ M   G KP A   ++ IN     G + DA     +  R  + P++  +N L+DGC  
Sbjct: 692 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 751

Query: 466 L---KRATDTVKLFMLMGMYNIKPDVITHTVL-----------IRGIASQG-----SLSS 506
           +    RA  T+K   ++G  + +P+  T+ +L           +R + + G      L  
Sbjct: 752 MGYIDRAFSTLK--RMVGA-SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 808

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
              L  +M+K GL P V TYS++I G  K   +     +   M   G++P+  IY +L+ 
Sbjct: 809 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 868

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
                   + AL     +++ G +P + +Y  ++ G C+
Sbjct: 869 CCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 907



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 220/461 (47%), Gaps = 38/461 (8%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+ GL     +  A  +   + + G  PN+     ++  LC +G++G+A  LFD + 
Sbjct: 256 YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 315

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+V+T++ +I  + K  ++  A ++  LM +    PD   Y+ LI GL    + +
Sbjct: 316 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTE 374

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  ELL  A+  G    VV F+++++ Y        A++  ++M++     ++  +  LI
Sbjct: 375 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 434

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             L ++ RL EA  L  ++    L P+++TY+S+IDG+CKSGK+     +   M + G +
Sbjct: 435 NSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ 494

Query: 421 PDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+A   + L+ GL+ D     A+    +  +  +IPN+  + TL+ G C      +  +L
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL 554

Query: 476 FMLMGMYNIKPD-----VIT---------------------------HTVLIRGIASQGS 503
           F +M    +KPD     V+T                           +T LI G +  G+
Sbjct: 555 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGN 614

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A  L  +M+  G TPD  TYS ++H L K K ++  L +   M   G+   I  Y +
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L++ +++E   D A +++ ++T  G +P   TY   I  YC
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 715



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 228/497 (45%), Gaps = 9/497 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+       + +++ +F  M   G   +      L+S L  S  VG    L  AM 
Sbjct: 256 YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 315

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  ++ G  + G + +A  +   + + G  P+  T N ++  LC + +  
Sbjct: 316 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTE 374

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L +  +  G  P VVTF+ LIN +C   K + A ++ N MM      DL ++  LI
Sbjct: 375 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 434

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + L K  RLKE  ELL      GL  +V+ ++S++D Y   G V  A++    M   G  
Sbjct: 435 NSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ 494

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN  +Y+ L+ GL +  +L +A  L  ++    + P+++TY++L+ G C      + F L
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL 554

Query: 411 YDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           ++ M + GLKPD    ++L + L   G A   +   VR  +      + TL+DG  +   
Sbjct: 555 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGN 614

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 L   M      PD  T++VL+  +  Q  L+ A+ +  QM  RG+   +  Y+ 
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I  + +         M+  M  +G  P    Y V +N   KE  L+ A  L  ++   G
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734

Query: 589 LEPDIITYNTII--CGY 603
           + PD++TYN +I  CG+
Sbjct: 735 VAPDVVTYNILIDGCGH 751



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 204/429 (47%), Gaps = 6/429 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y F +  L R  + E    ++ Q++Q G +P+ VT N ++K  C  G +  A   F +LL
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G +P   T + L+  +C+  +L KA  L+ +M  M    +   Y+ILI GL  A  ++
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +   L L     G   +V  F+ ++      G VG A   +D M   G +P+V++Y+ +I
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G  + GR+ +A  +   +      P   TY++LI G C   K  +   L +N +K G  
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFT 389

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P  V  + LING        DALR   + +      +L +F  L++   +  R  +  +L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              +    + P+VIT+T +I G    G +  A+ +   M + G  P+  TY+++++GL K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            K +   + +   M+++G+ P++  Y  LL     E + D A +LF  +   GL+PD   
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 596 YNTIICGYC 604
           Y  +    C
Sbjct: 570 YAVLTDALC 578



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 208/489 (42%), Gaps = 21/489 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+ Y + GK+D ++E+   M   G   +      LM  LV    + +   L   M+
Sbjct: 465 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 524

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G   +   +NAF +   + Q G  P+      +   LC   + G
Sbjct: 525 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---KAG 581

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   +  ++  G     V ++TLI+ F K    + A  L   M++    PD   YS+L+
Sbjct: 582 RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLL 641

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K  RL E   +L     RG+K  +  ++ ++D  +  G    A + Y+ M + G  
Sbjct: 642 HALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHK 701

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +Y++ I   C++GRL +A  L  ++    + P ++TY+ LIDG    G +   FS 
Sbjct: 702 PSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 761

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M+    +P+     LL+  L+   L  + +SV  + + NL   +             
Sbjct: 762 LKRMVGASCEPNYWTYCLLLKHLLKGNLA-YVRSVDTSGMWNLIELDI------------ 808

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
            T +L   M  + + P V T++ LI G    G L  A LL   M  +GL+P+   Y+ +I
Sbjct: 809 -TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
                 K     L    +M   G  P +  Y +L+  L  E + +    LF  L + G  
Sbjct: 868 KCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYN 927

Query: 591 PDIITYNTI 599
            D + +  +
Sbjct: 928 HDEVAWKIL 936



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 83/168 (49%)

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           R + Q V+  L+P+   +NT++   C+    T   + F L+    ++P+  T   L+ G 
Sbjct: 169 RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGY 228

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G L  A  LF  M   G   +  +Y+ +I GL   K +   L +F +M+R+G +P++
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNV 288

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             +  L++ L K   +  A  LF  +   G+ P ++TYN +I GY  L
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKL 336



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 137/358 (38%), Gaps = 55/358 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ + + G  D +  +   M D G          L+  L     + +   +   M 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 175 GKGF-CV---YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G  C    Y  L++ +LR+G  ++A  M+ ++   G  P+  T    +   C  G++ 
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF---------------------- 268
           +A  L   +   G  P+VVT++ LI+       +++AF                      
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781

Query: 269 -----------------------------QLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                                        QL   M++  L P +  YS LI G  KAGRL
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E   LL     +GL  +  +++ ++          +A+     M   GF P + SY +L
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL 901

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           + GLC +G   +   LF  +L        + +  L DG  K+G +   F +   M KR
Sbjct: 902 VVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 225/513 (43%), Gaps = 46/513 (8%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK---LC 170
            Y+  I+   R G+ +  + +   M  +G  L+PD +    S +      GQ+ +   + 
Sbjct: 217 SYNSAIKACGRGGQWERVIGLLREMPSVG--LTPDAIT-YNSVITGCGKEGQWKEALSVL 273

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M  KG       Y   +    R G  + A  + RQ+  +G  P++++ +  +K     
Sbjct: 274 TEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGG 333

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           GQ   +  L D +   G  PN + F++ I A  K  + EKA +L   +  + L PD   +
Sbjct: 334 GQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSF 393

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +  I    K+GR KE  ELL     + LK D + ++S ++A    G    A++   +M  
Sbjct: 394 NSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPT 453

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PNVIS +I I+   ++GR  E   L  Q+  + L P+++TY+S I    K G+   
Sbjct: 454 KGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEK 513

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
              L   M +  + PD++                               +N+ +  C + 
Sbjct: 514 ALDLLAKMKELAMTPDSIT------------------------------YNSAIAACSKR 543

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R  + V L   M    + PDVI++T  I      G    A+ L  QM  +GLTP+VITY
Sbjct: 544 GRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITY 603

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           +++I    +G      L + K ++   VAPD+  YN+ ++   K    + AL L  ++  
Sbjct: 604 NSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPA 663

Query: 587 RGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            GL PD+I+Y + I       +C  +G ++  +
Sbjct: 664 EGLTPDVISYTSAI------RACNAEGEWEKAL 690



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 215/494 (43%), Gaps = 21/494 (4%)

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG----KG--- 177
            GK  E++ I   M + G+  +      + +C       GQ+ K    +R     +G   
Sbjct: 123 TGKWREALGILDEMKEGGVVCAHSYTTAITTC----GRQGQWEKALELLREIPEQEGVSP 178

Query: 178 --FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
             FC Y   +         E A  + R++  R  VP+ ++ N  +K     GQ      L
Sbjct: 179 NVFC-YNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGL 237

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
              +  VG  P+ +T++++I    KE + ++A  +   M    L P+ I Y++ I    +
Sbjct: 238 LREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGR 297

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           +GR KE  E+L     +G+  DV+ + + + A  G G    +V   D M   G  PN I 
Sbjct: 298 SGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIH 357

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           ++  I    + G+  +A  L  +V    L P   +++S I    KSG+ ++   L   M 
Sbjct: 358 FNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMP 417

Query: 416 KRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            + LKPDA+  +  I      G    AL    Q     L PN+   N  +  C    R  
Sbjct: 418 AKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQ 477

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + ++L   M    + P+VIT+   I+     G    A+ L  +M +  +TPD ITY++ I
Sbjct: 478 EGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAI 537

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
               K       + + + M   G+ PD+  Y   ++   K    + A++L  Q+  +GL 
Sbjct: 538 AACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLT 597

Query: 591 PDIITYNTII--CG 602
           P++ITYN++I  CG
Sbjct: 598 PNVITYNSVIKACG 611



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 173/414 (41%), Gaps = 38/414 (9%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----C 179
           G+ +++VE+   ++ +G  L+PD       ++    S    +  +L + M  K       
Sbjct: 369 GQWEKAVELLREVTALG--LTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAI 426

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y   +    + G  E A  + RQ+  +G  PN+++ N  ++     G+      L   +
Sbjct: 427 SYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQM 486

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  PNV+T+++ I    K  + EKA  L   M E+ + PD I Y+  I    K GR 
Sbjct: 487 PAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRW 546

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE   LL     +GL  DV+ +++ +DAY   G   RAV+   +M   G  PNVI+Y+ +
Sbjct: 547 KEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSV 606

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IK   + G   +A  L  ++    + P L++Y+  I    K G+  +   L   M   GL
Sbjct: 607 IKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGL 666

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
            PD                              +  + + +  C         + L  LM
Sbjct: 667 TPD------------------------------VISYTSAIRACNAEGEWEKALGLLNLM 696

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           G + + P   ++++ I      G    A+ L  +M +RGL+   I+ S I+  L
Sbjct: 697 GAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEAL 750



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 162/409 (39%), Gaps = 54/409 (13%)

Query: 80  RDVASHV--FDKMVIQFGKTYNFFR---LFRD----SLGDFGCDYSFLIENYVRIGKIDE 130
           R VA +   F+  ++  GK   + +   L R+     L      ++  I    + G+  E
Sbjct: 349 RGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKE 408

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY---KLCRAMRGKGFCVYEFLMNG 187
           ++E+   M      L PD +    S +      GQ+    +L R M  KG        N 
Sbjct: 409 ALELLKEMPAK--RLKPDAIS-YNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNI 465

Query: 188 LLR----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
            +R    +G  +    + RQ+  +G  PN++T N  +K     GQ   A  L   +  + 
Sbjct: 466 AIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELA 525

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+ +T+++ I A  K  + ++A  L   M    L PD+I Y+  ID   K G+ +   
Sbjct: 526 MTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAV 585

Query: 304 ELLLTALDRGLKLDVVVFSSVMDA--------------------------------YVGI 331
           ELL     +GL  +V+ ++SV+ A                                    
Sbjct: 586 ELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISAC 645

Query: 332 GDVGRAVQTYD---RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
           G  GR  +  D    M   G  P+VISY+  I+    +G   +A GL   +    + P+ 
Sbjct: 646 GKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTA 705

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
            +YS  I+   K G+  +   L   M +RGL    +  SL++  L  DA
Sbjct: 706 TSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEALGDDA 754


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 231/494 (46%), Gaps = 32/494 (6%)

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM----RGKGFCVYEFLMNGL------LRK 191
           G Y SP +   L+     S      YKL + M       G+ VY  L+  +      L  
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSC 426

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
            ++E A   + +++  G V N +  +   + LC  G+   A S+   ++  G  P+  T+
Sbjct: 427 HLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S ++   C  +K+E AF L+  M    LV D+  Y+I++D   KAG +++  +      +
Sbjct: 487 SKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G   +VV +++++ AY+    V  A + ++ ML+ G LPN+++YS LI G C+ G++ +
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEK 606

Query: 372 ACGLFGQVLIRR-----------------LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           AC +F ++   +                   P+++ Y +L+DGFCK  ++ +   L D M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAM 666

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
              G +P+ +V   LI+GL     + +A     +         L+ +++L+D   ++KR 
Sbjct: 667 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQ 726

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
               K+   M   +  P+V+ +T +I G+   G    A  L   M ++G  P+V+TY+A+
Sbjct: 727 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 786

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  +   I   L + + M   GVAP+   Y VL++   K   LD A  L  ++     
Sbjct: 787 IDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 846

Query: 590 EPDIITYNTIICGY 603
                 Y  +I G+
Sbjct: 847 PTHAAGYRKVIEGF 860



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/509 (24%), Positives = 226/509 (44%), Gaps = 96/509 (18%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L   G  E AF + R++I +GF+P+  T +K+L  LC   ++  A  LF+ +   G   +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V T++ ++++FCK   +E+A + +N M E+   P+++ Y+ LI    KA ++   NEL  
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML-----------------NGGFL 350
           T L  G   ++V +S+++D +   G + +A Q ++RM                  +    
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSER 637

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV+ Y  L+ G C+  R+ EA  L   + +   EP+ + Y +LIDG CK GKL +   +
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M + G        S LI+          A +   + +  +  PN+ I+  ++DG C+
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           + +  +  KL  +M     +P+V+T+T +I G    G + + + L  +M  +G+ P+ +T
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817

Query: 526 -----------------------------------YSAIIHGLFKGKNISVGLHMFKLME 550
                                              Y  +I G  K    S+GL     + 
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGL--LDEIG 875

Query: 551 RNGVAPDIAIYNVLLNMLIKECNL------------------------------------ 574
           ++  AP +++Y +L++ LIK   L                                    
Sbjct: 876 QDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 935

Query: 575 -DAALKLFGQLTDRGLEPDIITYNTIICG 602
            D A +LF +++ +G+ P++ T+ ++I G
Sbjct: 936 VDKAFRLFSEMSKKGVIPEMQTFCSLIKG 964



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 147/658 (22%), Positives = 270/658 (41%), Gaps = 110/658 (16%)

Query: 46  NNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFR 105
             P+  I FF W    +   + + + + L+   +RD    V ++++ Q           R
Sbjct: 143 ERPSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQI----------R 192

Query: 106 DSLGD-FGCDYSFLIENYVRIGKIDESVEIFAYMSD-------------MGIYLSPD--- 148
           D   + FG   + L+  Y R G    ++E    + D             +  +L  D   
Sbjct: 193 DDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLD 252

Query: 149 ---LVQRLMS------------CLVDS-NSVGQYYKLCRAMRGKGFC----VYEFLMNGL 188
              LV R MS            C   S   VG++ +    M  + F      Y  L++GL
Sbjct: 253 SASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVPDTVFYTKLISGL 312

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
               + E A     ++     +PN+VT + +L       Q+G    + +++++ G  P+ 
Sbjct: 313 CEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSP 372

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG---------------- 292
             F++L++A+C       A++L   M++    P  ++Y+ILI                  
Sbjct: 373 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELA 432

Query: 293 -------------------------LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
                                    L  AG+ ++   ++   + +G   D   +S V+  
Sbjct: 433 EKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGY 492

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                 +  A   ++ M  GG + +V +Y+I++   C+ G + +A   F ++      P+
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
           ++TY++LI  + K+ K+     L++ M+  G  P+ V  S LI+     G M  A + F 
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFE 612

Query: 443 Q--------SVRM---------TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           +         V M         +  PN+ I+  L+DG C+L R  +  KL   M M   +
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCE 672

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P+ I +  LI G+   G L  A  +  +M + G    + TYS++I   FK K   +   +
Sbjct: 673 PNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 732

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              M  N  AP++ IY  +++ L K    D A KL   + ++G +P+++TY  +I G+
Sbjct: 733 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 790



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 208/475 (43%), Gaps = 61/475 (12%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ------IGNAS 233
           ++  L++     G    A+ + +++++ G  P  V  N ++  +C +        +  A 
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAE 433

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             +  +L  G   N +  S+     C   K EKAF +   M+    +PD   YS ++  L
Sbjct: 434 KAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYL 493

Query: 294 FKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
             A ++ E   LL   + RG L  DV  ++ ++D++   G + +A + ++ M   G  PN
Sbjct: 494 CNASKM-ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V++Y+ LI    +  ++  A  LF  +L     P+++TYS+LIDG CK+G++     +++
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFE 612

Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR--MTLIPNLFIFNTLMDGCCRLKRAT 470
            M      PD               +  +F+      +  PN+ I+  L+DG C+L R  
Sbjct: 613 RMCGSKDVPD---------------VDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVE 657

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL----------------------SSAI 508
           +  KL   M M   +P+ I +  LI G+   G L                      SS I
Sbjct: 658 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLI 717

Query: 509 LLFFQ-------------MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
             +F+             ML+    P+V+ Y+ +I GL K         + ++ME  G  
Sbjct: 718 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 777

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
           P++  Y  +++   +   ++  L+L  ++  +G+ P+ +TY  +I  +C  N  L
Sbjct: 778 PNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLI-DHCCKNGAL 831



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 114/487 (23%), Positives = 213/487 (43%), Gaps = 90/487 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +++++ + G I+++ + F  M ++G   +P++V                        
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGC--TPNVV------------------------ 554

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L++  L+   +  A  +   ++  G +PNIVT + ++   C  GQ+  A  
Sbjct: 555 -----TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQ 609

Query: 235 LF----------DVLLLV-------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           +F          DV +           +PNVV +  L++ FCK  ++E+A +L + M   
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSME 669

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              P+ I+Y  LIDGL K G+L E  E+     + G    +  +SS++D Y  +     A
Sbjct: 670 GCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 729

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            +   +ML     PNV+ Y+ +I GLC+ G+  EA  L   +  +  +P+++TY+++IDG
Sbjct: 730 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 789

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPN 452
           F + GK+     L + M  +G+ P+ V   +LI     NG + D      + ++ T  P 
Sbjct: 790 FGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL-DVAHNLLEEMKQTHWPT 848

Query: 453 ----------------------------------LFIFNTLMDGCCRLKRATDTVKLFML 478
                                             L ++  L+D   + +R    ++L   
Sbjct: 849 HAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEE 908

Query: 479 MGMYN--IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
           +  ++  +     T+  LI  +     +  A  LF +M K+G+ P++ T+ ++I GLF+ 
Sbjct: 909 VATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRN 968

Query: 537 KNISVGL 543
             IS  L
Sbjct: 969 SKISEAL 975



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 122/557 (21%), Positives = 225/557 (40%), Gaps = 61/557 (10%)

Query: 66  NIAQLIHVLLQS--DMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYV 123
           ++ Q++ ++ QS  D R +A  V     +   K+  F R FR+ L +     S +IE   
Sbjct: 86  DLHQVVPIITQSSIDARAIADAVSGGDDVFGSKSQKFLRQFREKLSE-----SLVIEVLR 140

Query: 124 RIGKIDESVEIFAYMS-DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
            I +    +  F +    +G   +  +   L+  +V  +      +L + +R     V+ 
Sbjct: 141 LIERPSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFG 200

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQR----GFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
             +N L+RK     +F +  + + R     F P+  T N +++       + +AS +   
Sbjct: 201 EFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHRE 260

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           + L   + +  T      + CK  K  +A     LM   + VPD + Y+ LI GL +A  
Sbjct: 261 MSLANLRMDGFTLRCYAYSLCKVGKWREAL---TLMETENFVPDTVFYTKLISGLCEASL 317

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            +E  + L                                   +RM     LPNV++YS 
Sbjct: 318 FEEAMDFL-----------------------------------NRMRATSCLPNVVTYST 342

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ G   + +L     +   +++    PS   ++SL+  +C SG     + L   M+K G
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402

Query: 419 LKPDAVVCSLLINGLMGD-----------ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             P  VV ++LI  + GD           A + + + +   ++ N    ++     C   
Sbjct: 403 HTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAG 462

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +      +   M      PD  T++ ++  + +   +  A LLF +M + GL  DV TY+
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++    K   I      F  M   G  P++  Y  L++  +K   +  A +LF  +   
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582

Query: 588 GLEPDIITYNTIICGYC 604
           G  P+I+TY+ +I G+C
Sbjct: 583 GCLPNIVTYSALIDGHC 599



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 148/359 (41%), Gaps = 87/359 (24%)

Query: 102 RLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMG----IYLSPDLVQR 152
           R   D++   GC+     Y  LI+   ++GK+DE+ E+ A MS+ G    +Y    L+ R
Sbjct: 660 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDR 719

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
                    +     K+          +Y  +++GL + G  + A+ + + + ++G  PN
Sbjct: 720 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 779

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPK---PNVVTFSTLINAFCKEAKLEKAFQ 269
           +VT   ++      G+IG   +  ++L  +G K   PN VT+  LI+  CK   L+ A  
Sbjct: 780 VVTYTAMIDGF---GRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA-- 834

Query: 270 LYNLMMEM------------------------------------DLVPDLIIYSILIDGL 293
            +NL+ EM                                    D  P L +Y +L+D L
Sbjct: 835 -HNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNL 893

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            KA RL    E+ L  L+     +V  FS+ +  Y                         
Sbjct: 894 IKAQRL----EMALRLLE-----EVATFSATLVDYSS----------------------- 921

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
            +Y+ LI+ LC   ++ +A  LF ++  + + P + T+ SLI G  ++ K+ +   L D
Sbjct: 922 -TYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLD 979


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 219/436 (50%), Gaps = 10/436 (2%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL---KRLCINGQIGNASSL 235
            +++  ++  L +G    A  + +++I+    PN++TCN +L    R   +  I +A  +
Sbjct: 132 ALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREV 191

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM-EMDLVPDLIIYSILIDGLF 294
           FD ++ +G   NV TF+ L+N +C E KLE A  +   M+ E  + PD + Y+ ++  + 
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS 251

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K GRL +  ELLL     GL  + V +++++  Y  +G +  A Q  + M     LP++ 
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ILI GLC  G + E   L   +   +L+P ++TY++LIDG  + G   +   L + M
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI------PNLFIFNTLMDGCCRLKR 468
              G+K + V  ++ +  L  +  R         L+      P++  ++TL+    ++  
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            +  +++   MG   IK + IT   ++  +  +  L  A  L     KRG   D +TY  
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I G F+ + +   L M+  M++  + P ++ +N L+  L      + A++ F +L + G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551

Query: 589 LEPDIITYNTIICGYC 604
           L PD  T+N+II GYC
Sbjct: 552 LLPDDSTFNSIILGYC 567



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 216/432 (50%), Gaps = 8/432 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHM-HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            +  L+NG   +G +E+A  M  R V +    P+ VT N ILK +   G++ +   L   
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G  PN VT++ L+  +CK   L++AFQ+  LM + +++PDL  Y+ILI+GL  AG 
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           ++EG EL+       L+ DVV +++++D    +G    A +  ++M N G   N ++++I
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385

Query: 359 LIKGLCQQGRLVEACGLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +K LC++ +         +++ +    P ++TY +LI  + K G L     +   M ++
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G+K + +  + +++ L     + +A      + +   I +   + TL+ G  R ++    
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           ++++  M    I P V T   LI G+   G    A+  F ++ + GL PD  T+++II G
Sbjct: 506 LEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
             K   +      +    ++   PD    N+LLN L KE   + AL  F  L +   E D
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVD 624

Query: 593 IITYNTIICGYC 604
            +TYNT+I  +C
Sbjct: 625 TVTYNTMISAFC 636



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/449 (23%), Positives = 196/449 (43%), Gaps = 42/449 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++  + +KG + +   +   + + G VPN VT N ++   C  G +  A  + +++
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P++ T++ LIN  C    + +  +L + M  + L PD++ Y+ LIDG F+ G  
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361

Query: 300 KEGNELLLTALDRGLKL------------------------------------DVVVFSS 323
            E  +L+    + G+K                                     D+V + +
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++ AY+ +GD+  A++    M   G   N I+ + ++  LC++ +L EA  L      R 
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----AL 438
                +TY +LI GF +  K+     ++D M K  + P     + LI GL        A+
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F +     L+P+   FN+++ G C+  R     + +     ++ KPD  T  +L+ G+
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
             +G ++   L FF  L      D +TY+ +I    K K +     +   ME  G+ PD 
Sbjct: 602 CKEG-MTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDR 587
             YN  +++L+++  L    +L  + + +
Sbjct: 661 FTYNSFISLLMEDGKLSETDELLKKFSGK 689



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 190/381 (49%), Gaps = 10/381 (2%)

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
           +SL    L + P P+   F   ++A+  E K   A Q++  M+ + L P+L+  + L+ G
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIG 175

Query: 293 LFK---AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-G 348
           L +   +  +    E+    +  G+ L+V  F+ +++ Y   G +  A+   +RM++   
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ ++Y+ ++K + ++GRL +   L   +    L P+ +TY++L+ G+CK G L++ F
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            + + M +  + PD    ++LINGL     M + L        + L P++  +NTL+DGC
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK-RGLTPD 522
             L  + +  KL   M    +K + +TH + ++ +  +    +      +++   G +PD
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           ++TY  +I    K  ++S  L M + M + G+  +    N +L+ L KE  LD A  L  
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475

Query: 583 QLTDRGLEPDIITYNTIICGY 603
               RG   D +TY T+I G+
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGF 496



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 189/405 (46%), Gaps = 15/405 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ L+  Y ++G + E+ +I   M    +   PDL     L++ L ++ S+ +  +L  A
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVL--PDLCTYNILINGLCNAGSMREGLELMDA 335

Query: 173 MRG----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+          Y  L++G    G+   A  +  Q+   G   N VT N  LK LC   +
Sbjct: 336 MKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK 395

Query: 229 IGNASSLFDVLL-LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
               +     L+ + G  P++VT+ TLI A+ K   L  A ++   M +  +  + I  +
Sbjct: 396 REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLN 455

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            ++D L K  +L E + LL +A  RG  +D V + +++  +     V +A++ +D M   
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              P V +++ LI GLC  G+   A   F ++    L P   T++S+I G+CK G++   
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDG 462
           F  Y+  IK   KPD   C++L+NGL  +     AL FF   +    + +   +NT++  
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISA 634

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            C+ K+  +   L   M    ++PD  T+   I  +   G LS  
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 28/324 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+ Y+++G +  ++E+   M   GI ++   +  ++  L     + + + L  +  
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +GF V    Y  L+ G  R+  +E A  M  ++ +    P + T N ++  LC +G+  
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTE 538

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   FD L   G  P+  TF+++I  +CKE ++EKAF+ YN  ++    PD    +IL+
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K G  ++      T ++   ++D V +++++ A+     +  A      M   G  
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLE 657

Query: 351 PNVISYSILIKGLCQQGRLVEA-------CGLFG------QVLIRR----------LEPS 387
           P+  +Y+  I  L + G+L E         G FG      QV   +          L   
Sbjct: 658 PDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTE 717

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLY 411
            + YS +ID  C  G+L++    Y
Sbjct: 718 AIAYSDVIDELCSRGRLKEHSRSY 741


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 248/519 (47%), Gaps = 34/519 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI  Y    K D+++ +   M      L   +  +L++ L+  + + +  +L   + 
Sbjct: 395 FTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEIS 454

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  +++G  + G ++ A  + + + + G  PN  T N ++  L  + ++ 
Sbjct: 455 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 514

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A +L   +   G  PNV+T++TL+   C E   + AF+L+ +M +  L PD   Y++L 
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L KAGR +E    ++    +G+ L  V +++++D +   G+   A    +RM++ G  
Sbjct: 575 DALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCT 631

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +YS+L+  LC+Q RL EA  +  Q+ +R ++ ++  Y+ LID   + GK      +
Sbjct: 632 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 691

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           Y+ M   G KP A   ++ IN     G + DA     +  R  + P++  +N L+DGC  
Sbjct: 692 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 751

Query: 466 L---KRATDTVKLFMLMGMYNIKPDVITHTVL-----------IRGIASQG-----SLSS 506
           +    RA  T+K   ++G  + +P+  T+ +L           +R + + G      L  
Sbjct: 752 MGYIDRAFSTLK--RMVGA-SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 808

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
              L  +M+K GL P V TYS++I G  K   +     +   M   G++P+  IY +L+ 
Sbjct: 809 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 868

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
                   + AL     +++ G +P + +Y  ++ G C+
Sbjct: 869 CCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 907



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 228/497 (45%), Gaps = 9/497 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+       + E++ +F  M   G   +      L+S L  S  VG    L  AM 
Sbjct: 256 YTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 315

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  ++ G  + G + +A  +   + + G  P+  T N ++  LC + +  
Sbjct: 316 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTE 374

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L +  +  G  P VVTF+ LIN +C   K + A ++ N MM      DL ++  LI
Sbjct: 375 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 434

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + L K  RLKE  ELL      GL  +V+ ++S++D Y   G V  A++    M   G  
Sbjct: 435 NSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ 494

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN  +Y+ L+ GL +  +L +A  L  ++    + P+++TY++L+ G C      + F L
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL 554

Query: 411 YDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           ++ M + GLKPD    ++L + L   G A   +   VR  +      + TL+DG  +   
Sbjct: 555 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGN 614

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 L   M      PD  T++VL+  +  Q  L+ A+ +  QM  RG+   +  Y+ 
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I  + +         M+  M  +G  P    Y V +N   KE  L+ A  L  ++   G
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734

Query: 589 LEPDIITYNTII--CGY 603
           + PD++TYN +I  CG+
Sbjct: 735 VAPDVVTYNILIDGCGH 751



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 220/461 (47%), Gaps = 38/461 (8%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+ GL     +  A  +   + + G  PN+     ++  LC +G++G+A  LFD + 
Sbjct: 256 YTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 315

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+V+T++ +I  + K  ++  A ++  LM +    PD   Y+ LI GL    + +
Sbjct: 316 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTE 374

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  ELL  A+  G    VV F+++++ Y        A++  ++M++     ++  +  LI
Sbjct: 375 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 434

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             L ++ RL EA  L  ++    L P+++TY+S+IDG+CKSGK+     +   M + G +
Sbjct: 435 NSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ 494

Query: 421 PDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+A   + L+ GL+ D     A+    +  +  +IPN+  + TL+ G C      +  +L
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL 554

Query: 476 FMLMGMYNIKPD-----VIT---------------------------HTVLIRGIASQGS 503
           F +M    +KPD     V+T                           +T LI G +  G+
Sbjct: 555 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGN 614

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A  L  +M+  G TPD  TYS ++H L K K ++  L +   M   G+   I  Y +
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L++ +++E   D A +++ ++T  G +P   TY   I  YC
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 715



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 205/429 (47%), Gaps = 6/429 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y F +  L R  + E    ++ Q++Q G +P+ VT N ++K  C  G +  A   F +LL
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G +P   T + L+  +C+  +L KA  L+ +M  M    +   Y+ILI GL +A  ++
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   L L     G   +V  F+ ++      G VG A   +D M   G +P+V++Y+ +I
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G  + GR+ +A  +   +      P   TY++LI G C   K  +   L +N +K G  
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFT 389

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P  V  + LING        DALR   + +      +L +F  L++   +  R  +  +L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              +    + P+VIT+T +I G    G +  A+ +   M + G  P+  TY+++++GL K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
            K +   + +   M+++G+ P++  Y  LL     E + D A +LF  +   GL+PD   
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 596 YNTIICGYC 604
           Y  +    C
Sbjct: 570 YAVLTDALC 578



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 208/489 (42%), Gaps = 21/489 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+ Y + GK+D ++E+   M   G   +      LM  LV    + +   L   M+
Sbjct: 465 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 524

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+ G   +   +NAF +   + Q G  P+      +   LC   + G
Sbjct: 525 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---KAG 581

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   +  ++  G     V ++TLI+ F K    + A  L   M++    PD   YS+L+
Sbjct: 582 RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLL 641

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K  RL E   +L     RG+K  +  ++ ++D  +  G    A + Y+ M + G  
Sbjct: 642 HALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHK 701

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  +Y++ I   C++GRL +A  L  ++    + P ++TY+ LIDG    G +   FS 
Sbjct: 702 PSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 761

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M+    +P+     LL+  L+   L  + +SV  + + NL   +             
Sbjct: 762 LKRMVGASCEPNYWTYCLLLKHLLKGNLA-YVRSVDTSGMWNLIELDI------------ 808

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
            T +L   M  + + P V T++ LI G    G L  A LL   M  +GL+P+   Y+ +I
Sbjct: 809 -TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
                 K     L    +M   G  P +  Y +L+  L  E + +    LF  L + G  
Sbjct: 868 KCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYN 927

Query: 591 PDIITYNTI 599
            D + +  +
Sbjct: 928 HDEVAWKIL 936



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 84/168 (50%)

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           R + Q V+  L+P+   +NT++   C+    T   + F L+    ++P+  T   L+ G 
Sbjct: 169 RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGY 228

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G L  A  LF  M   G   +  +Y+ +I GL + K +   L +F +M+R+G +P++
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNV 288

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             +  L++ L K   +  A  LF  +   G+ P ++TYN +I GY  L
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKL 336



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 137/358 (38%), Gaps = 55/358 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ + + G  D +  +   M D G          L+  L     + +   +   M 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 175 GKGF-CV---YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G  C    Y  L++ +LR+G  ++A  M+ ++   G  P+  T    +   C  G++ 
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF---------------------- 268
           +A  L   +   G  P+VVT++ LI+       +++AF                      
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781

Query: 269 -----------------------------QLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                                        QL   M++  L P +  YS LI G  KAGRL
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E   LL     +GL  +  +++ ++          +A+     M   GF P + SY +L
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL 901

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           + GLC +G   +   LF  +L        + +  L DG  K+G +   F +   M KR
Sbjct: 902 VVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 214/425 (50%), Gaps = 10/425 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFV---PNIVTCNKILKRLCINGQIGNASSLFD 237
           +  ++N ++++G+   A   +  V+    +   PN +T N ++K +C  G +  A  +F 
Sbjct: 135 FNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFR 194

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            + L    P+  T+STL++  CKE ++++A  L + M      P+L+ +++LI  L K G
Sbjct: 195 EIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKG 254

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            L    +L+     +G   + V +++++      G + +AV   ++M++   +PN +++ 
Sbjct: 255 DLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFG 314

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G   QGR  +   +   +  R    +   YSSLI G CK GK      L+  M+ +
Sbjct: 315 TLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGK 374

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G  P+ +V S LI+GL     + +A  F  +      +PN F +++LM G      +   
Sbjct: 375 GCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKA 434

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           + ++  M   N   + + +++LI G+   G    A++++ QML RG+  DV+ YS++IHG
Sbjct: 435 ILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHG 494

Query: 533 LFKGKNISVGLHMFKLMERNG--VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
                 +  GL +F  M   G  V PD+  YN+LLN    + ++  A+ +   + D+G +
Sbjct: 495 FCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCD 554

Query: 591 PDIIT 595
           PD IT
Sbjct: 555 PDFIT 559



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 206/418 (49%), Gaps = 38/418 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ +I+   R+G +D+++E+F  +              L +C  D+ +            
Sbjct: 173 FNLVIKAMCRLGLVDKAIEVFREIP-------------LRNCAPDNYT------------ 207

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  LM+GL ++  I+ A  +  ++   G  PN+V  N ++  LC  G +G A+ 
Sbjct: 208 ------YSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAK 261

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L D + L G  PN VT++ L++  C + KLEKA  L N M+    VP+ + +  LI+G  
Sbjct: 262 LVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFV 321

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             GR  +G  +L++   RG + +  V+SS++      G   +A++ +  M+  G  PN I
Sbjct: 322 MQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTI 381

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            YS LI GLC++G+L EA G   ++  +   P+  TYSSL+ G+ ++G       ++  M
Sbjct: 382 VYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEM 441

Query: 415 IKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
                  + V  S+LINGL  D     AL  + Q +   +  ++  +++++ G C     
Sbjct: 442 ANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLV 501

Query: 470 TDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
              +KLF  ML     ++PDVIT+ +L+     Q S+  AI +   ML +G  PD IT
Sbjct: 502 EQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT 559



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 189/366 (51%), Gaps = 7/366 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PN +TF+ +I A C+   ++KA +++  +   +  PD   YS L+ GL K  R+ E   L
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L      G   ++V F+ ++ A    GD+GRA +  D M   G +PN ++Y+ L+ GLC 
Sbjct: 228 LDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCL 287

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G+L +A  L  Q++  +  P+ +T+ +LI+GF   G+  DG  +  ++  RG + +  V
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347

Query: 426 CSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            S LI+GL  +     A+  + + V     PN  +++ L+DG CR  +  +       M 
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                P+  T++ L+RG    G    AIL++ +M       + + YS +I+GL K     
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG--LEPDIITYNT 598
             L ++K M   G+  D+  Y+ +++       ++  LKLF Q+  +G  ++PD+ITYN 
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNI 527

Query: 599 IICGYC 604
           ++  +C
Sbjct: 528 LLNAFC 533



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 129/257 (50%), Gaps = 12/257 (4%)

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           R  RG  + VY  L++GL ++G    A  + ++++ +G  PN +  + ++  LC  G++ 
Sbjct: 339 RGHRGNEY-VYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLD 397

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A      +   G  PN  T+S+L+  + +     KA  ++  M   + + + + YSILI
Sbjct: 398 EARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILI 457

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K G+  E   +    L RG+KLDVV +SS++  +     V + ++ +++ML  G +
Sbjct: 458 NGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPV 517

Query: 351 --PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS-----GK 403
             P+VI+Y+IL+   C Q  +  A  +   +L +  +P  +T     D F K+       
Sbjct: 518 VQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT----CDIFLKTLRENMNP 573

Query: 404 LRDGFSLYDNMIKRGLK 420
            +DG    D ++ R +K
Sbjct: 574 PQDGREFLDELVVRLVK 590



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 131/291 (45%), Gaps = 30/291 (10%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           GK      L+++ +G  GC      YS LI+   R GK+DE+    + M + G   +   
Sbjct: 359 GKFNQAMELWKEMVGK-GCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFT 417

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQV 204
              LM    ++    +   + + M     C+     Y  L+NGL + G    A  + +Q+
Sbjct: 418 YSSLMRGYFEAGDSHKAILVWKEMANNN-CIHNEVCYSILINGLCKDGKFMEALMVWKQM 476

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP--KPNVVTFSTLINAFCKEA 262
           + RG   ++V  + ++   C    +     LF+ +L  GP  +P+V+T++ L+NAFC + 
Sbjct: 477 LSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQK 536

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK-AGRLKEGNELLLTALDRGLKLDVVVF 321
            + +A  + N+M++    PD I   I +  L +     ++G E L   + R +K    + 
Sbjct: 537 SIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIG 596

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           +S               +  + M++   LP   +++++++ +C+   + +A
Sbjct: 597 AS---------------KIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKA 632


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 233/489 (47%), Gaps = 22/489 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN----SVGQYYKLC 170
           ++ L+  +   G+  ++V+ F+ M +     +  +   ++  LVDS     ++  Y ++ 
Sbjct: 140 FAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMV 199

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            A        Y  LM+GL ++G+  +A  M  +++ RG +PN+     +L  LC  G+I 
Sbjct: 200 AAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKID 259

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   +   G  P+ VT++  ++  CK  ++ +AFQ   ++ +      L  YS LI
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGLF+A R  EG     T L+R +  DVV+++ ++      G +  A+   D M   GF+
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+   Y+ ++K LC  G L  A  L  ++L   L     T + +I G CK G + +   +
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQI 439

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDA----LRFFFQSVRMTLIPNLFI----------- 455
           +D M + G  P  +  + LI+G   +      R  F  + M   P+LF+           
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCD 499

Query: 456 ---FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
                 L+   C+  +     KL   +    + PDV+T+  LI G+    +L  A+ LF 
Sbjct: 500 SESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFK 559

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           ++  +G++PD ITY  +I GL +    +  + +F+ + ++G +P ++IYN ++  L +  
Sbjct: 560 ELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMK 619

Query: 573 NLDAALKLF 581
            L  A+ L+
Sbjct: 620 KLSQAINLW 628



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 152/340 (44%), Gaps = 40/340 (11%)

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           + L  A   GL      F++++ A+   G    AVQ + RM      P    Y+ ++K L
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKAL 182

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
              G ++ A  L+ +++     P+  TY+ L+DG CK G   D   ++D M+ RG+ P+ 
Sbjct: 183 VDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNV 242

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            + ++L++     G + +A++          +P+   +N  + G C++ R  +  +  ++
Sbjct: 243 KIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVM 302

Query: 479 M-----------------------------GMY------NIKPDVITHTVLIRGIASQGS 503
           +                             G Y      NI PDV+ +T++IRG A  G 
Sbjct: 303 LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGR 362

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A+     M K+G  PD   Y+ ++  L    ++     +   M +N +  D     +
Sbjct: 363 IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTI 422

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           ++  L K   +D A+++F ++ + G +P ++TYN +I G+
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF 462



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 25/235 (10%)

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLK 467
           +L   +  R L   AV   L ++    +A+       R   +P +   F  L+       
Sbjct: 92  ALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAG 151

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  D V+ F  M  +  +P    +  +++ +   G +  A+ L+ +M+  G  P+  TY+
Sbjct: 152 RHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYN 211

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++ GL K       L MF  M   G+ P++ IY VLL+ L     +D A++L G + D+
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDK 271

Query: 588 GLEPDIITYNTIICGYCSLN------------------------SCLIDGYFKSQ 618
           G  PD +TYN  + G C +                         SCLIDG F+++
Sbjct: 272 GCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQAR 326



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 95/469 (20%), Positives = 180/469 (38%), Gaps = 97/469 (20%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS LI+   +  + DE    +  M +  I  SPD+V    ++    ++  +         
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNI--SPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 173 MRGKGFCVYEFLMNGLLR----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ KGF    F  N +L+     G +E A  +  +++Q   V +  T   ++  LC  G 
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE----------------------- 265
           +  A  +FD +   G  P V+T++ LI+ F +E +LE                       
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 266 -------------------------KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                                    KA++L   +++  +VPD++ Y+ LI+GL KA  L 
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               L      +G+  D + + +++D  +       A+  +  +L  G  P++  Y+ ++
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMM 612

Query: 361 KGLCQQGRLVEACGLFGQVLIRR----LEPSLLT-------------------------- 390
           + LC+  +L +A  L+   L ++    +E  +L                           
Sbjct: 613 RSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYG 672

Query: 391 ------YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALR 439
                 Y+  + G C+  +  D   ++  + + G+      C+LLIN L  D     A+ 
Sbjct: 673 YISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVD 732

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
               ++  ++I +  + N L+   C   R  D   L   M +     DV
Sbjct: 733 IMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDV 781



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 28/279 (10%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           D +G+ GCD     Y+ LI+ + R G+++E+  +F  M +MG   +P L  RL    + +
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGN--NPSLFLRLT---LGA 494

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           N V     L +            L++ + + G +  A+ + R +I  G VP++VT N ++
Sbjct: 495 NQVCDSESLRK------------LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC    +  A  LF  L L G  P+ +T+ TLI+   +  +   A  L+  +++    
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM-DAYVGI--GDVGRA 337
           P L IY+ ++  L +  +L +   L L  L +  K +  V S V+ +A+  I  G +   
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK--KYNFPVESEVLANAHKEIEDGSLDDG 660

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           V+   ++       +   Y+I + GLCQ  R  +A  +F
Sbjct: 661 VRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIF 699


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 233/489 (47%), Gaps = 22/489 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN----SVGQYYKLC 170
           ++ L+  +   G+  ++V+ F+ M +     +  +   ++  LVDS     ++  Y ++ 
Sbjct: 140 FAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMV 199

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            A        Y  LM+GL ++G+  +A  M  +++ RG +PN+     +L  LC  G+I 
Sbjct: 200 AAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKID 259

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   +   G  P+ VT++  ++  CK  ++ +AFQ   ++ +      L  YS LI
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGLF+A R  EG     T L+R +  DVV+++ ++      G +  A+   D M   GF+
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+   Y+ ++K LC  G L  A  L  ++L   L     T + +I G CK G + +   +
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQI 439

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDA----LRFFFQSVRMTLIPNLFI----------- 455
           +D M + G  P  +  + LI+G   +      R  F  + M   P+LF+           
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRD 499

Query: 456 ---FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
                 L+   C+  +     KL   +    + PDV+T+  LI G+    +L  A+ LF 
Sbjct: 500 SESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFK 559

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           ++  +G++PD ITY  +I GL +    +  + +F+ + ++G +P ++IYN ++  L +  
Sbjct: 560 ELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMK 619

Query: 573 NLDAALKLF 581
            L  A+ L+
Sbjct: 620 KLSQAINLW 628



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/493 (22%), Positives = 230/493 (46%), Gaps = 29/493 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+ +    GKIDE+V++   M D G           +S L     V + ++    ++
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF +    Y  L++GL +    +  F  ++ +++R   P++V    +++     G+I 
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A S  DV+   G  P+   ++T++   C    LE+A  L + M++ +LV D    +I+I
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM------ 344
            GL K G + E  ++     + G    V+ +++++D +   G +  A   + +M      
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484

Query: 345 -------LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
                  L    + +  S   L+  +CQ G++++A  L   ++   + P ++TY++LI+G
Sbjct: 485 SLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPN 452
            CK+  L     L+  +  +G+ PD +    LI+GL+      DA+  F   ++    P+
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFM--LMGMYN--IKPDVITHTVLIRGIASQGSLSSAI 508
           L I+N++M   CR+K+ +  + L++  L   YN  ++ +V+ +          GSL   +
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANA---HKEIEDGSLDDGV 661

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
               ++ +   +     Y+  + GL + +     L +F  ++  G+    A   +L+N L
Sbjct: 662 RELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYL 721

Query: 569 IKECNLDAALKLF 581
             + NL+AA+ + 
Sbjct: 722 CWDRNLNAAVDIM 734



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 152/340 (44%), Gaps = 40/340 (11%)

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           + L  A   GL      F++++ A+   G    AVQ + RM      P    Y+ ++K L
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKAL 182

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
              G ++ A  L+ +++     P+  TY+ L+DG CK G   D   ++D M+ RG+ P+ 
Sbjct: 183 VDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNV 242

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            + ++L++     G + +A++          +P+   +N  + G C++ R  +  +  ++
Sbjct: 243 KIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVM 302

Query: 479 M-----------------------------GMY------NIKPDVITHTVLIRGIASQGS 503
           +                             G Y      NI PDV+ +T++IRG A  G 
Sbjct: 303 LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGR 362

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A+     M K+G  PD   Y+ ++  L    ++     +   M +N +  D     +
Sbjct: 363 IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTI 422

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           ++  L K   +D A+++F ++ + G +P ++TYN +I G+
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF 462



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 25/235 (10%)

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLK 467
           +L   +  R L   AV   L ++    +A+       R   +P +   F  L+       
Sbjct: 92  ALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAG 151

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  D V+ F  M  +  +P    +  +++ +   G +  A+ L+ +M+  G  P+  TY+
Sbjct: 152 RHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYN 211

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++ GL K       L MF  M   G+ P++ IY VLL+ L     +D A++L G + D+
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDK 271

Query: 588 GLEPDIITYNTIICGYCSLN------------------------SCLIDGYFKSQ 618
           G  PD +TYN  + G C +                         SCLIDG F+++
Sbjct: 272 GCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQAR 326



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 143/333 (42%), Gaps = 29/333 (8%)

Query: 180 VYEFLMNGLLRKGVIENA---FHMH----------RQVIQRGFVPNIVTCNKILKRLCIN 226
            Y  L++G  R+G +E A   FH            R  +    V +  +  K++  +C +
Sbjct: 454 TYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQS 513

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           GQ+  A  L   ++  G  P+VVT++TLIN  CK   L+ A +L+  +    + PD I Y
Sbjct: 514 GQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITY 573

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
             LIDGL +A R  +   L    L  G    + +++S+M +   +  + +A+  +     
Sbjct: 574 GTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW----- 628

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQV--LIRRLEP----SLLTYSSLIDGFCK 400
             +LP   ++ +  + L    + +E   L   V  LI+  +     S   Y+  + G C+
Sbjct: 629 LDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQ 688

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFI 455
             +  D   ++  + + G+      C+LLIN L  D     A+     ++  ++I +  +
Sbjct: 689 VRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPV 748

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
            N L+   C   R  D   L   M +     DV
Sbjct: 749 GNRLLRWLCICYRRQDAQALAWRMHLVGYDMDV 781



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 34/282 (12%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           D +G+ GCD     Y+ LI+ + R G+++E+  +F  M +MG   +P L  RL    + +
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGN--NPSLFLRLT---LGA 494

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           N V     L +            L++ + + G +  A+ + R +I  G VP++VT N ++
Sbjct: 495 NQVRDSESLRK------------LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC    +  A  LF  L L G  P+ +T+ TLI+   +  +   A  L+  +++    
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM-DAYVGIGDVG---- 335
           P L IY+ ++  L +  +L +   L L  L +  K +  V S V+ +A+  I D      
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK--KYNFPVESEVLANAHKEIEDGSLDDG 660

Query: 336 -RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            R +   D+   G    N   Y+I + GLCQ  R  +A  +F
Sbjct: 661 VRELIKIDQEY-GSISSN--PYTIWLIGLCQVRRTDDALRIF 699


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 233/489 (47%), Gaps = 22/489 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN----SVGQYYKLC 170
           ++ L+  +   G+  ++V+ F+ M +     +  +   ++  LVDS     ++  Y ++ 
Sbjct: 140 FAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMV 199

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            A        Y  LM+GL ++G+  +A  M  +++ RG +PN+     +L  LC  G+I 
Sbjct: 200 AAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKID 259

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L   +   G  P+ VT++  ++  CK  ++ +AFQ   ++ +      L  YS LI
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGLF+A R  EG     T L+R +  DVV+++ ++      G +  A+   D M   GF+
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+   Y+ ++K LC  G L  A  L  ++L   L     T + +I G CK G + +   +
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQI 439

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDA----LRFFFQSVRMTLIPNLFI----------- 455
           +D M + G  P  +  + LI+G   +      R  F  + M   P+LF+           
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCD 499

Query: 456 ---FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
                 L+   C+  +     KL   +    + PDV+T+  LI G+    +L  A+ LF 
Sbjct: 500 SESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFK 559

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           ++  +G++PD ITY  +I GL +    +  + +F+ + ++G +P ++IYN ++  L +  
Sbjct: 560 ELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMK 619

Query: 573 NLDAALKLF 581
            L  A+ L+
Sbjct: 620 KLSQAINLW 628



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 152/340 (44%), Gaps = 40/340 (11%)

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           + L  A   GL      F++++ A+   G    AVQ + RM      P    Y+ ++K L
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKAL 182

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
              G ++ A  L+ +++     P+  TY+ L+DG CK G   D   ++D M+ RG+ P+ 
Sbjct: 183 VDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNV 242

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            + ++L++     G + +A++          +P+   +N  + G C++ R  +  +  ++
Sbjct: 243 KIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVM 302

Query: 479 M-----------------------------GMY------NIKPDVITHTVLIRGIASQGS 503
           +                             G Y      NI PDV+ +T++IRG A  G 
Sbjct: 303 LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGR 362

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A+     M K+G  PD   Y+ ++  L    ++     +   M +N +  D     +
Sbjct: 363 IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTI 422

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           ++  L K   +D A+++F ++ + G +P ++TYN +I G+
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF 462



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 25/235 (10%)

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIP-NLFIFNTLMDGCCRLK 467
           +L   +  R L   AV   L ++    +A+       R   +P +   F  L+       
Sbjct: 92  ALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAG 151

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  D V+ F  M  +  +P    +  +++ +   G +  A+ L+ +M+  G  P+  TY+
Sbjct: 152 RNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYN 211

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++ GL K       L MF  M   G+ P++ IY VLL+ L     +D A++L G + D+
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDK 271

Query: 588 GLEPDIITYNTIICGYCSLN------------------------SCLIDGYFKSQ 618
           G  PD +TYN  + G C +                         SCLIDG F+++
Sbjct: 272 GCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQAR 326



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 95/469 (20%), Positives = 180/469 (38%), Gaps = 97/469 (20%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS LI+   +  + DE    +  M +  I  SPD+V    ++    ++  +         
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNI--SPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 173 MRGKGFCVYEFLMNGLLR----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ KGF    F  N +L+     G +E A  +  +++Q   V +  T   ++  LC  G 
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE----------------------- 265
           +  A  +FD +   G  P V+T++ LI+ F +E +LE                       
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 266 -------------------------KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                                    KA++L   +++  +VPD++ Y+ LI+GL KA  L 
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               L      +G+  D + + +++D  +       A+  +  +L  G  P++  Y+ ++
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMM 612

Query: 361 KGLCQQGRLVEACGLFGQVLIRR----LEPSLLT-------------------------- 390
           + LC+  +L +A  L+   L ++    +E  +L                           
Sbjct: 613 RSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYG 672

Query: 391 ------YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALR 439
                 Y+  + G C+  +  D   ++  + + G+      C+LLIN L  D     A+ 
Sbjct: 673 YISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVD 732

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
               ++  ++I +  + N L+   C   R  D   L   M +     DV
Sbjct: 733 IMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDV 781



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 28/279 (10%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           D +G+ GCD     Y+ LI+ + R G+++E+  +F  M +MG   +P L  RL    + +
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGN--NPSLFLRLT---LGA 494

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           N V     L +            L++ + + G +  A+ + R +I  G VP++VT N ++
Sbjct: 495 NQVCDSESLRK------------LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC    +  A  LF  L L G  P+ +T+ TLI+   +  +   A  L+  +++    
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM-DAYVGI--GDVGRA 337
           P L IY+ ++  L +  +L +   L L  L +  K +  V S V+ +A+  I  G +   
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK--KYNFPVESEVLANAHKEIEDGSLDDG 660

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           V+   ++       +   Y+I + GLCQ  R  +A  +F
Sbjct: 661 VRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIF 699


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 242/525 (46%), Gaps = 47/525 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY-YKLCRAM 173
           Y+ L+   +  G + E++ +F  M             R  SC  D++      + LC A 
Sbjct: 145 YTALLHGLLGAGMVREAMAVFVGM-------------RADSCAPDTHVYATMVHGLCEAG 191

Query: 174 R------------GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           R              GF     VY  L++G    G +E+A  +   +      PN+ T  
Sbjct: 192 RTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYT 251

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           +++  LC +G++  A  LF  ++  G +PNVVT++ LI   C E  L+ AF+L +LM   
Sbjct: 252 ELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETN 311

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            LVP+   +S+LID L K  +++E    L + + +G+K++ VV++S++D     G +  A
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            +   +M++ GF+P+  SYS LI GLC+Q +L +A  +   ++ + ++ S +TY+ +ID 
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPN 452
             +         ++D MI  G+ PD V  ++ +      G M DA     Q V   + PN
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI---- 508
           L  +NTL+ G   L   +     F +M     KP+  ++TVL+R +  + S  +++    
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551

Query: 509 --------LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
                   +L   + +R L      YS  I  L +   +    H F  M+   + P   +
Sbjct: 552 IADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDV 611

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           Y  +++   +   L  AL L   +T  G  P + +Y  II   C 
Sbjct: 612 YTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCE 656



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 218/443 (49%), Gaps = 5/443 (1%)

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           L   M  +    Y  L+N     G I  A      ++  G  P+       +   C  G 
Sbjct: 63  LASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGM 122

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  +F ++ L G      T++ L++       + +A  ++  M      PD  +Y+ 
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++ GL +AGR +E   LL  A+  G + ++VV+++++D Y   G++  A++ ++ M    
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV +Y+ LI GLC+ G++  A  LF +++   LEP+++TY++LI G C  G L+  F
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L   M   GL P+    S+LI+ L     + +A  F    V+  +  N  ++ +L+DG 
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +     +L   M      PD  +++ LI G+  Q  LS A L+   M+++G+    
Sbjct: 363 CKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP 422

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY+ II  L +         +F  M   G+ PDI  Y V +    +E  ++ A  +  Q
Sbjct: 423 VTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + DRG+ P+++TYNT+I GY +L
Sbjct: 483 MVDRGVFPNLVTYNTLIRGYANL 505



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 230/505 (45%), Gaps = 62/505 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVGQ----YYK 168
           Y+ LI+ Y   G+++ ++++F  M   G   SP++     L+  L  S  V +    + +
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMD--GNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  A        Y  L+ G   +G ++ AF +   +   G VPN  T + ++  LC   +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A      L+  G K N V +++LI+  CK  K++ A +L   M+    VPD   YS 
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV-GIGDVGRAVQTYDRMLNG 347
           LIDGL +  +L +   +L   +++G++   V ++ ++D  V  +G  G   + +D+M+  
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPK-KIFDKMIAT 451

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P++++Y++ ++  C++GR+ +A  +  Q++ R + P+L+TY++LI G+   G +   
Sbjct: 452 GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511

Query: 408 FSLYDNMI-----------------------------------------------KRGLK 420
           FS ++ M+                                               +R L 
Sbjct: 512 FSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLP 571

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
             A + S  I  L     + +A  FF       L P+  ++ +++D CCRLK  TD + L
Sbjct: 572 LAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTL 631

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M      P + ++ ++I  +   G+  +A  +F  +L +    D I +  +I+GL +
Sbjct: 632 LDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQ 691

Query: 536 GKNISVGLHMFKLMERNGVAPDIAI 560
             +++    +  +M+ +G  P   I
Sbjct: 692 KGSVAEFSSLLSVMKEHGYQPSNTI 716



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 148/331 (44%), Gaps = 16/331 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI+   R  K+ ++  +   M + GI  SP     ++  LV         K+   M 
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y   +     +G +E+A  M  Q++ RG  PN+VT N +++     G + 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL---VPDLI--- 284
            A S F+V++  G KPN  +++ L+    K++  + +  ++ +    DL   + D+    
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQ 569

Query: 285 ------IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
                 IYS  I  L +  RL+E     +   +  L     V++S++D    +  +  A+
Sbjct: 570 LPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDAL 629

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
              D M   G+LP++ SY I+I  LC+ G    A  +FG +L++      + +  LI G 
Sbjct: 630 TLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGL 689

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            + G + +  SL   M + G +P   + +++
Sbjct: 690 LQKGSVAEFSSLLSVMKEHGYQPSNTINAMI 720


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 221/425 (52%), Gaps = 8/425 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +  ++  L++      A  + RQ+   G  P+IVT   ++   C  G I    S+   +L
Sbjct: 13  FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +G +PN +TF+TLI   C   +  +A   ++ ++      D + Y+IL++GL K G  +
Sbjct: 73  KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETR 132

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              ++L       +  DVV++S+++D+      V  A + Y  M+  G  PNV ++SIL+
Sbjct: 133 AAMQMLRKTW---VNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILV 189

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC+  +  +A  L   ++ + ++P+++TY +++DG+C   ++    ++++ M++ G++
Sbjct: 190 DALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVE 249

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+    +++INGL     + +A+  F +     + P++  +N L+DG C+L + + +++L
Sbjct: 250 PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLEL 309

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M       D+IT+  L+  +     L  AI L  ++  +G+ P+V TY+ +I GL K
Sbjct: 310 VDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCK 369

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +     +F+ +   G    +  YNV++N L K+   D AL L  ++ D    PD ++
Sbjct: 370 DGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVS 429

Query: 596 YNTII 600
           Y TII
Sbjct: 430 YETII 434



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 213/408 (52%), Gaps = 10/408 (2%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           ++Q    P I+  N IL  L        A SLF  L   G KP++VT + L+N +C    
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           +   F +   +++M   P+ I ++ LI G+   G+  E        +  G KLD V ++ 
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFL-PNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +M+    +G+   A+Q    ML   ++  +V+ YS +I  LC+   + +A  L+ +++ +
Sbjct: 121 LMNGLCKMGETRAAMQ----MLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAK 176

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            + P++ T+S L+D  CK  K +   +L   M+K+G+KP+ V    +++G      +  A
Sbjct: 177 GIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKA 236

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           L  F   V+  + PN++ +N +++G C+ KR  + + LF  M    I PDV+T+ +LI G
Sbjct: 237 LNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDG 296

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G +S+++ L  +M   G T D+ITY++++H L K  ++   + + K ++  G+ P+
Sbjct: 297 LCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPN 356

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           +  Y  L++ L K+  L+ A  +F ++   G    + TYN +I G C 
Sbjct: 357 VCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCK 404



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 225/479 (46%), Gaps = 37/479 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ ++ + V+I     ++ +F  +   GI  S   +  LM+C   +  +   + +   + 
Sbjct: 13  FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G+      +  L+ G+   G    A   H  V+  GF  + V+   ++  LC   ++G
Sbjct: 73  KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC---KMG 129

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
              +   +L       +VV +ST+I++ CK   +  A++LY+ M+   + P++  +SIL+
Sbjct: 130 ETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILV 189

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L K  + K+   LL   + +G+K +VV + ++MD Y  +  V +A+  ++ M+  G  
Sbjct: 190 DALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVE 249

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV  Y+I+I GLC++ R+ EA  LF ++  +++ P ++TY+ LIDG CK GK+     L
Sbjct: 250 PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLEL 309

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            D M                            +S+  T+  ++  +N+L+   C+     
Sbjct: 310 VDEM----------------------------RSIGKTV--DIITYNSLLHALCKNHHLD 339

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + L   +    I+P+V T+T LI G+   G L  A ++F ++L  G    V TY+ +I
Sbjct: 340 QAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMI 399

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           +GL K       L +   ME N   PD   Y  ++  L ++       KL   +  RGL
Sbjct: 400 NGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 164/292 (56%), Gaps = 4/292 (1%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           ++ F+ ++ + V I     A+  + ++   G  P++++ +IL+   C  G +     +  
Sbjct: 10  ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILT 69

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MG 435
           ++L    EP+ +T+++LI G C +G+  +    +D+++  G K D V  ++L+NGL  MG
Sbjct: 70  KILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129

Query: 436 DALRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
           +  R   Q +R T +  ++ +++T++D  C+ K  TD  +L+  M    I P+V T ++L
Sbjct: 130 ET-RAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSIL 188

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           +  +        A+ L   M+K+G+ P+V+TY AI+ G      ++  L++F +M + GV
Sbjct: 189 VDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGV 248

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            P++  YN+++N L K+  +D A+ LF ++  + + PD++TYN +I G C L
Sbjct: 249 EPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKL 300



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 212/438 (48%), Gaps = 45/438 (10%)

Query: 30  LQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVL-----------LQSD 78
           LQFN    ILA+L+K N+   AI  F+        P+I  L  ++           L S 
Sbjct: 11  LQFNH---ILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 79  MRDVASHVFDKMVIQF----------GKTYNFFRLFRDSLGDFG-----CDYSFLIENYV 123
           +  +    ++   I F          G+ Y    LF D +   G       Y+ L+    
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEAL-LFHDHVVAHGFKLDQVSYAILMNGLC 126

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY----YKLCRAMRGKGF- 178
           ++G+   ++++         +++ D+V  + S ++DS   G++    Y+L   M  KG  
Sbjct: 127 KMGETRAAMQMLR-----KTWVNADVV--MYSTIIDSLCKGKFVTDAYRLYSEMIAKGIF 179

Query: 179 -CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
             VY F  L++ L +    + A ++   ++++G  PN+VT   I+   C+  Q+  A ++
Sbjct: 180 PNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNI 239

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F+V++  G +PNV  ++ +IN  CK+ ++++A  L+  M    + PD++ Y+ILIDGL K
Sbjct: 240 FNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCK 299

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G++    EL+      G  +D++ ++S++ A      + +A+     + + G  PNV +
Sbjct: 300 LGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCT 359

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+ LI GLC+ GRL +A  +F ++L      ++ TY+ +I+G CK G   +  +L   M 
Sbjct: 360 YTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRME 419

Query: 416 KRGLKPDAVVCSLLINGL 433
                PDAV    +I  L
Sbjct: 420 DNACIPDAVSYETIIYAL 437



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 163/327 (49%), Gaps = 24/327 (7%)

Query: 101 FRLFRDSL--GDFGCDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLM 154
           +RL+ + +  G F   Y+F  L++   +  K  +++ + A M   G+   P++V    +M
Sbjct: 167 YRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGV--KPNVVTYGAIM 224

Query: 155 S--CLVDSNSVGQYYKLCRAMRGKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
              CLV  N V +   +   M  +G     +C Y  ++NGL +K  ++ A ++ +++  +
Sbjct: 225 DGYCLV--NQVNKALNIFNVMVQEGVEPNVWC-YNIIINGLCKKKRVDEAMNLFKEMHWK 281

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
              P++VT N ++  LC  G+I  +  L D +  +G   +++T+++L++A CK   L++A
Sbjct: 282 KINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQA 341

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L   + +  + P++  Y+ LIDGL K GRL++   +    L  G  + V  ++ +++ 
Sbjct: 342 ITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMING 401

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA----CGLFGQVLIRR 383
               G    A+    RM +   +P+ +SY  +I  L ++G  V+     C +  + L +R
Sbjct: 402 LCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKR 461

Query: 384 LEP--SLLTYSSLIDGFCKSGKLRDGF 408
           L+   ++ T + L D +     L DG 
Sbjct: 462 LKKKVNMTTIADLNDKWAAYASLEDGM 488



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 127/266 (47%), Gaps = 35/266 (13%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           ML     P ++ ++ ++  L +      A  LF Q+    ++PS++T + L++ +C +G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +   FS+   ++K G +P+++                               F TL+ G 
Sbjct: 61  ITFLFSILTKILKMGYEPNSIT------------------------------FTTLIKGM 90

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPD 522
           C   +A + +     +  +  K D +++ +L+ G+   G   +A+    QML++  +  D
Sbjct: 91  CLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAM----QMLRKTWVNAD 146

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V+ YS II  L KGK ++    ++  M   G+ P++  +++L++ L K+     A+ L  
Sbjct: 147 VVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLA 206

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNS 608
            +  +G++P+++TY  I+ GYC +N 
Sbjct: 207 MMMKKGVKPNVVTYGAIMDGYCLVNQ 232


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 217/427 (50%), Gaps = 21/427 (4%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S LI  Y  +G++  +  +FA +  MG+ L+  + + L   L   + +   + L      
Sbjct: 106 SILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEAL---LFHDHVLALGFHL------ 156

Query: 176 KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                Y  L+NGL + G    A  + RQ+  +    N+V  + I+  LC +  + +A  L
Sbjct: 157 -NHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGL 215

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           +  +++    P VVTFS+LI  FC   K + AF+L+N M+  ++ PD   ++IL+D L K
Sbjct: 216 YSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCK 275

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G++KE   ++   +  G++  VV ++++MD Y  + +VG+A      +      PN  S
Sbjct: 276 EGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRS 335

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+I+I G C+   + EA  LF ++  R + P  +TY+SLIDG CK+G++   + L D M 
Sbjct: 336 YNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMH 395

Query: 416 KRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR---LK 467
              +  D V  + LI     N  +  A+    +     + PN+  +N L+DG C+   LK
Sbjct: 396 NNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLK 455

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
            A D  +  ++ G YN+  +  T+ ++I G+  +G    A +L  +M   G+ PD +TY 
Sbjct: 456 NAQDVFQDLLIKG-YNV--NAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYE 512

Query: 528 AIIHGLF 534
            II  LF
Sbjct: 513 TIIQALF 519



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 213/422 (50%), Gaps = 28/422 (6%)

Query: 193 VIENA---FHMHRQVIQRGFVPNIVTCNKILKRLC-INGQIGNASSLFDVLLLVGPKPNV 248
           V++NA   F+  RQ+ Q    P+IV  NKIL  L           SL   +   G KP++
Sbjct: 46  VVDNAVLSFNRMRQIRQ---TPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDL 102

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
            T S LIN +C   ++  AF ++  +++M              GL   G++ E       
Sbjct: 103 FTLSILINCYCHLGQMTFAFSVFAKILKM--------------GLCLNGKVNEALLFHDH 148

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL-PNVISYSILIKGLCQQG 367
            L  G  L+ V +  +++    +G    A+Q   R + G  +  NV+ YS +I GLC+  
Sbjct: 149 VLALGFHLNHVTYGILINGLCKMGQTRAALQVL-RQIEGKLVNTNVVMYSTIIDGLCKDK 207

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
            + +A GL+ +++++R+ P+++T+SSLI GFC  GK +D F L++ M+ + + PDA   +
Sbjct: 208 LVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFN 267

Query: 428 LLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
           +L++ L     + +A       ++  + P +  +NTLMDG C +        +  ++   
Sbjct: 268 ILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRM 327

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            + P+  ++ ++I G      +  A+ LF +M  RG+ P  +TY+++I GL K   I   
Sbjct: 328 RVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYA 387

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +   M  N +  DI  YN L+++  K  ++D A+ L  ++ + G++P++ TYN +I G
Sbjct: 388 WELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDG 447

Query: 603 YC 604
            C
Sbjct: 448 LC 449



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 203/392 (51%), Gaps = 12/392 (3%)

Query: 218 KILKR-LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           KILK  LC+NG++  A    D +L +G   N VT+  LIN  CK  +   A Q+   +  
Sbjct: 127 KILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEG 186

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             +  ++++YS +IDGL K   + +   L    + + +   VV FSS++  +  +G    
Sbjct: 187 KLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKD 246

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A + ++ M+     P+  +++IL+  LC++G++ EA  +   ++   +EP+++TY++L+D
Sbjct: 247 AFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMD 306

Query: 397 GFC---KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMT 448
           G+C   + GK +   S+   M    + P++   +++ING     ++ +AL  F +     
Sbjct: 307 GYCLVNEVGKAKHVLSIISRM---RVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRG 363

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + P+   +N+L+DG C+  R     +L   M    I  D++T+  LI        +  AI
Sbjct: 364 IAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAI 423

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  ++ + G+ P++ TY+ +I GL KG  +     +F+ +   G   +   YN+++N L
Sbjct: 424 ALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGL 483

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            KE   D A  L  ++ D G+ PD +TY TII
Sbjct: 484 CKEGLFDEAEVLLSKMEDNGIIPDAVTYETII 515



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ-QGRLVEACGLFGQVLIRRLEPSLLTYS 392
           V  AV +++RM      P+++ ++ ++  L + +        L  Q+  + ++P L T S
Sbjct: 47  VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPN 452
            LI+ +C  G++   FS++  ++K GL          +NG + +AL F    + +    N
Sbjct: 107 ILINCYCHLGQMTFAFSVFAKILKMGL---------CLNGKVNEALLFHDHVLALGFHLN 157

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              +  L++G C++ +    +++   +    +  +V+ ++ +I G+     ++ A  L+ 
Sbjct: 158 HVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYS 217

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M+ + + P V+T+S++I+G            +F  M    + PD   +N+L++ L KE 
Sbjct: 218 EMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEG 277

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            +  A  +   +   G+EP ++TYNT++ GYC +N 
Sbjct: 278 KIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNE 313



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 149/340 (43%), Gaps = 57/340 (16%)

Query: 95  GKTYNFFRLFRD----SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           GK  + FRLF +    ++      ++ L++   + GKI E+  + A M   G+  +    
Sbjct: 242 GKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTY 301

Query: 151 QRLMS--CLVDSNSVGQYYK----LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQV 204
             LM   CLV  N VG+       + R         Y  ++NG  +  +++ A  +  ++
Sbjct: 302 NTLMDGYCLV--NEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEM 359

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
             RG  P+ VT N ++  LC  G+I  A  L D +       ++VT+++LI+ FCK   +
Sbjct: 360 CCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHV 419

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           +KA  L   + E  + P++  Y+ILIDGL K G+LK   ++                   
Sbjct: 420 DKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDV------------------- 460

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
                           +  +L  G+  N  +Y+I+I GLC++G   EA     +VL+ ++
Sbjct: 461 ----------------FQDLLIKGYNVNAWTYNIMINGLCKEGLFDEA-----EVLLSKM 499

Query: 385 E-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           E     P  +TY ++I       +      L   M+ +G+
Sbjct: 500 EDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 195/364 (53%), Gaps = 5/364 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +  L+N   R   ++ AF +  ++I+ GF P+ VT + ++  LC   +   A   FD ++
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G +PN+ T++T+I  FCK  K   A  L   M +    PD++IY+ +IDGL K   + 
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E  ++      +G++ DV  +S +M           A   ++ M++   +P+V++++IL+
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC++G L EA G+   ++ + +EP+  TY+SL++G+C   K+ +   ++D MI +G  
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V  ++LING      + +A   F +     LIPN F +NTL+ G C+  R  +  +L
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M      PD++T T+L+  +   G L +A+ LF  M    L P+++TY  +I  ++K
Sbjct: 422 FKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYK 481

Query: 536 GKNI 539
              I
Sbjct: 482 SGKI 485



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 206/412 (50%), Gaps = 5/412 (1%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           IE+A      +I +  +P IV  +K+L  L      G   SL   + L+  + +V  F+ 
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LIN F +  +++ AF +   ++++   PD + +S LI+GL    +     E     +  G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            + ++  +++++  +  IG    AV    +M   G  P+++ Y+ +I GLC+   + EA 
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +F ++  + + P + TYS L+ G C S +  +  +L++ M+   + PD V  ++L++ L
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304

Query: 434 MGDALRFFFQSVRMTLI-----PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
             + +    Q +   +I     PN   +N+LM+G C   +  +   +F  M      P+V
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNV 364

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +++ +LI G      +  A  LF +M  RGL P+   Y+ +I GL +         +FK 
Sbjct: 365 VSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKD 424

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           M+  G +PD+    +LL+ L K   LD AL+LF  + D  L+P+++TY+ +I
Sbjct: 425 MQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILI 476



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 204/420 (48%), Gaps = 43/420 (10%)

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           V+   K     R+ RD        ++ LI  + R+ ++D +  +   +  +G    PD V
Sbjct: 103 VLSLSKRIELLRIERDVF-----HFNILINCFSRLQRVDFAFSVLGKIIKLG--FEPDAV 155

Query: 151 --QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQV 204
               L++ L   +   +  +    M   G+      Y  ++ G  + G    A  + +++
Sbjct: 156 TFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKM 215

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
            + G  P+IV  N I+  LC +  +  A  +F  +   G +P+V T+S L++  C   + 
Sbjct: 216 DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQK 275

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E+A  L+N MM ++++PD++ ++IL+D L K G L E   ++   +++G++ +   ++S+
Sbjct: 276 EEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSL 335

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           M+ Y     V  A   +D M+  G +PNV+SY+ILI G C+  R+ EA  LF ++  R L
Sbjct: 336 MNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGL 395

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQS 444
            P+   Y++LI G C++G+  +   L+ +M  +G  PD V C++L++ L           
Sbjct: 396 IPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSL----------- 444

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
                              C+L    + ++LF  M    +KP+++T+ +LIR +   G +
Sbjct: 445 -------------------CKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 182/356 (51%), Gaps = 15/356 (4%)

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL-- 316
           C    +E A   +N M+    +P ++ +  L+  L    R+K    +L  +L + ++L  
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALV---RIKHYGTVL--SLSKRIELLR 114

Query: 317 ---DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
              DV  F+ +++ +  +  V  A     +++  GF P+ +++S LI GLC + +   A 
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             F +++    +P+L TY+++I GFCK GK      L   M K G +PD V+ + +I+GL
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234

Query: 434 MGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
             D     AL  F +     + P++F ++ LM G C   +  +   LF  M   NI PDV
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T  +L+  +  +G LS A  +   M+++G+ P+  TY+++++G      +     +F  
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDA 354

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M   G  P++  YN+L+N   K   +D A +LF +++ RGL P+   YNT+I G C
Sbjct: 355 MITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLC 410



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 203/425 (47%), Gaps = 15/425 (3%)

Query: 197 AFHMHRQVIQRGFVPNIVTCN----------KILKRLCINGQIGNASSLFDVLLLVGPKP 246
            FH  R   ++G +  + T            +  ++ C    I +A   F+ ++   P P
Sbjct: 23  GFHSQRSQTEKGMICCLHTSTISRSRSGSGRQKYQKGCSLTNIEDALFSFNHMIHKHPLP 82

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
            +V F  L++A  +         L   +  + +  D+  ++ILI+   +  R+     +L
Sbjct: 83  CIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVL 142

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              +  G + D V FSS+++         RA++ +D M+  G+ PN+ +Y+ +IKG C+ 
Sbjct: 143 GKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKI 202

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G+   A GL  ++      P ++ Y+++IDG CK   + +   ++  +  +G++PD    
Sbjct: 203 GKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTY 262

Query: 427 SLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           S+L++GL       +A   F + + + ++P++  FN L+D  C+    ++   +  +M  
Sbjct: 263 SILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIE 322

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             ++P+  T+  L+ G   Q  +  A ++F  M+ +G  P+V++Y+ +I+G  K + I  
Sbjct: 323 KGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDE 382

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
              +F  M   G+ P+   YN L++ L +      A +LF  +  +G  PD++T   ++ 
Sbjct: 383 ARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLD 442

Query: 602 GYCSL 606
             C L
Sbjct: 443 SLCKL 447



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 146/280 (52%), Gaps = 5/280 (1%)

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           ++  A+ +++ M++   LP ++ +  L+  L +         L  ++ + R+E  +  ++
Sbjct: 64  NIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFN 123

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM 447
            LI+ F +  ++   FS+   +IK G +PDAV  S LINGL        A+ FF + V  
Sbjct: 124 ILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVAS 183

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
              PNL  +NT++ G C++ + T  V L   M     +PD++ +  +I G+     +S A
Sbjct: 184 GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           + +F ++  +G+ PDV TYS ++HGL           +F  M    + PD+  +N+L++ 
Sbjct: 244 LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L KE  L  A  +   + ++G+EP+  TYN+++ GYC  N
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQN 343



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 8/228 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           YS L+       + +E+  +F  M  M + + PD+V    L+  L     + +   + + 
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEM--MSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKI 319

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG    +  Y  LMNG   +  +  A  +   +I +G +PN+V+ N ++   C   +
Sbjct: 320 MIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQR 379

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  LFD +   G  PN   ++TLI+  C+  +  +A +L+  M      PDL+  +I
Sbjct: 380 IDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTI 439

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
           L+D L K G L     L     D  LK ++V +  ++ A    G + R
Sbjct: 440 LLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487


>gi|18420848|ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g24830
 gi|22655280|gb|AAM98230.1| putative protein [Arabidopsis thaliana]
 gi|30725398|gb|AAP37721.1| At5g24830 [Arabidopsis thaliana]
 gi|332005984|gb|AED93367.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 593

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 210/426 (49%), Gaps = 9/426 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           ++  +M  L  +G ++ A  + +++I  G +P ++T N +L  LC  G I  A  L   +
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             +GP PN V+++TLI   C    ++KA  L+N M +  + P+ +  +I++  L + G +
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242

Query: 300 KEGNELLLTAL----DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
              N+ LL  +         LD+V+ + +MD+    G+V +A++ +  M       + + 
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+++I+GLC  G +V A G    ++ R + P + TY++LI   CK GK  +   L+  M 
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362

Query: 416 KRGLKPDAVVCSLLINGL--MGDALR---FFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G+ PD +   ++I GL   GD  R   F    ++ +L+P + ++N ++DG  R    +
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + +  LM  Y +KP+V T+  LI G    G L  A  +  +M    + PD  TY+ ++
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
                  ++ +   ++  M R G  PDI  Y  L+  L  +  L  A  L  ++   G+ 
Sbjct: 483 GAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGIT 542

Query: 591 PDIITY 596
            D + +
Sbjct: 543 IDHVPF 548



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 186/371 (50%), Gaps = 10/371 (2%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           G   +  L+NGL + G IE A  + R++ + G  PN V+ N ++K LC    +  A  LF
Sbjct: 155 GLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLF 214

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKL----EKAFQLYNLMMEMDLVPDLIIYSILIDG 292
           + +   G +PN VT + +++A C++  +    +K  +      + +   D++I +IL+D 
Sbjct: 215 NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDS 274

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
            FK G + +  E+      + +  D VV++ ++      G++  A      M+  G  P+
Sbjct: 275 CFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPD 334

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V +Y+ LI  LC++G+  EAC L G +    + P  ++Y  +I G C  G +        
Sbjct: 335 VFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLL 394

Query: 413 NMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           +M+K  L P+ ++ +++I+G    GD   AL      +   + PN++  N L+ G  +  
Sbjct: 395 SMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  D   +   M    I PD  T+ +L+    + G L  A  L+ +ML+RG  PD+ITY+
Sbjct: 455 RLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYT 514

Query: 528 AIIHGL-FKGK 537
            ++ GL +KG+
Sbjct: 515 ELVRGLCWKGR 525



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 162/327 (49%), Gaps = 8/327 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL----- 169
           Y+ LI+    +  +D+++ +F  M+  GI  +      ++  L     +G   K      
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEI 253

Query: 170 ---CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
               +A       +   LM+   + G +  A  + +++ Q+    + V  N I++ LC +
Sbjct: 254 LDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSS 313

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A      ++  G  P+V T++TLI+A CKE K ++A  L+  M    + PD I Y
Sbjct: 314 GNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISY 373

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            ++I GL   G +   NE LL+ L   L  +V++++ V+D Y   GD   A+   + ML+
Sbjct: 374 KVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLS 433

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PNV + + LI G  + GRL++A  +  ++   ++ P   TY+ L+   C  G LR 
Sbjct: 434 YGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRL 493

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL 433
            F LYD M++RG +PD +  + L+ GL
Sbjct: 494 AFQLYDEMLRRGCQPDIITYTELVRGL 520



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 187/401 (46%), Gaps = 52/401 (12%)

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S+++   C + KL+ A  L   M+   ++P LI ++ L++GL KAG +++ + L+    +
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G   + V +++++     + +V +A+  ++ M   G  PN ++ +I++  LCQ+G +  
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI-- 242

Query: 372 ACGLFGQVLIRRLEPS--------LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
             G   + L+  +  S        ++  + L+D   K+G +     ++  M ++ +  D+
Sbjct: 243 --GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           VV +++I GL     M  A  F    V+  + P++F +NTL+   C+  +  +   L   
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSL---------------------------------- 504
           M    + PD I++ V+I+G+   G +                                  
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420

Query: 505 -SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
            SSA+ +   ML  G+ P+V T +A+IHG  KG  +     +   M    + PD   YN+
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           LL       +L  A +L+ ++  RG +PDIITY  ++ G C
Sbjct: 481 LLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLC 521



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 147/293 (50%), Gaps = 9/293 (3%)

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           + SS+M      G +  A+    +M+  G +P +I+++ L+ GLC+ G + +A GL  ++
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLM 434
                 P+ ++Y++LI G C    +     L++ M K G++P+ V C+++++     G++
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242

Query: 435 GDA----LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           G+     L     S +     ++ I   LMD C +       ++++  M   N+  D + 
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           + V+IRG+ S G++ +A      M+KRG+ PDV TY+ +I  L K         +   M+
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             GVAPD   Y V++  L    +++ A +    +    L P+++ +N +I GY
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGY 415



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 45/320 (14%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQYYKLC---- 170
           + L+++  + G + +++E++  MS   +     +   ++  L  S N V  Y  +C    
Sbjct: 269 TILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK 328

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           R +    F  Y  L++ L ++G  + A  +H  +   G  P+ ++   I++ LCI+G + 
Sbjct: 329 RGVNPDVF-TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387

Query: 231 NAS-----------------------------------SLFDVLLLVGPKPNVVTFSTLI 255
            A+                                   S+ +++L  G KPNV T + LI
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           + + K  +L  A+ + N M    + PD   Y++L+      G L+   +L    L RG +
Sbjct: 448 HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ 507

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D++ ++ ++      G + +A     R+   G   + + + IL K   +  R  EA  +
Sbjct: 508 PDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLV 567

Query: 376 FGQVLIRRLE----PSLLTY 391
           + + L  R      PS+L +
Sbjct: 568 YKKWLATRNRGVSCPSILNH 587



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 39/192 (20%)

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           L I +++M   C   +    + L   M    + P +ITH  L+ G+   G +  A  L  
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP---------------- 556
           +M + G +P+ ++Y+ +I GL    N+   L++F  M + G+ P                
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240

Query: 557 -----------------------DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
                                  DI I  +L++   K  N+  AL+++ +++ + +  D 
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300

Query: 594 ITYNTIICGYCS 605
           + YN II G CS
Sbjct: 301 VVYNVIIRGLCS 312



 Score = 47.0 bits (110), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 46/83 (55%)

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           +S+I+  L     +   L + K M  +GV P +  +N LLN L K   ++ A  L  ++ 
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183

Query: 586 DRGLEPDIITYNTIICGYCSLNS 608
           + G  P+ ++YNT+I G CS+N+
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNN 206


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 236/503 (46%), Gaps = 45/503 (8%)

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
           I  + R G  D +++ F   SD+G                               R  G 
Sbjct: 93  IGAFARAGSADRALKTFYRASDLGC------------------------------RDPGV 122

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            VY  L++ LLR+ ++     ++  + + G  PN+ T N +++ LC N ++  A  + D 
Sbjct: 123 RVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDE 182

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G  P+ V+  T+++  CK  ++E+A          + VP    Y+ ++  L    R
Sbjct: 183 MSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL-----AETVPVQASYNAVVHALCGEFR 237

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + E   ++   + RGL+ +VV +++++DA+    ++  A     RM++ G  PNV++++ 
Sbjct: 238 MWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTA 297

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+KG  + G++ +A  ++  ++     PS ++Y+ LI G C  G L+     +++M +  
Sbjct: 298 LVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNA 357

Query: 419 LKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           L P+A   S L++G    GD   A+  + +       PN+ ++  ++D  C+        
Sbjct: 358 LLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAE 417

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M M N  P+ +T   LI  +   G +  A+ +F  M + G  P+  TY+ ++HGL
Sbjct: 418 SLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGL 477

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           F+  N      M   M  NG    +  YN ++N L + C    A+ L G++  +G++PD 
Sbjct: 478 FREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDA 537

Query: 594 ITYNTIICGYC-----SLNSCLI 611
            T+N II  YC     S+ +CL+
Sbjct: 538 FTFNAIIHAYCKEGKVSIAACLL 560



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/526 (23%), Positives = 232/526 (44%), Gaps = 35/526 (6%)

Query: 69  QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKI 128
            L+  LL+ +M      V+D M  + G   N +             Y+ LI    +  ++
Sbjct: 127 HLLDALLRENMVGAVVPVYDNMR-KAGVDPNVY------------TYNLLIRALCQNDRV 173

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF--------CV 180
           D + ++   MS  G +  PD V            V    KL R    +GF          
Sbjct: 174 DAARKMLDEMSRKGCH--PDEVSH-------GTIVSGMCKLGRVEEARGFLAETVPVQAS 224

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  +++ L  +  +   F +  +++QRG  PN+VT   I+   C   ++  A ++   ++
Sbjct: 225 YNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMV 284

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +G  PNV+TF+ L+  F ++ K+  A  +++ M++    P  I Y++LI GL   G LK
Sbjct: 285 SMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLK 344

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              +   +     L  +   +S+++D +   GD+  A+  ++ M + G  PNV+ Y+ +I
Sbjct: 345 GALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMI 404

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC++    +A  L  ++L+    P+ +T+++LI   C  G++    +++  M + G  
Sbjct: 405 DVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCH 464

Query: 421 PDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+    + L++GL       DA     + +      +L  +NT+++  C++      + L
Sbjct: 465 PNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLL 524

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M +  I+PD  T   +I     +G +S A  L  QM       +V+ Y+ +I  L  
Sbjct: 525 LGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCN 584

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
              +S  +     M   G+ P+ A +NVL+  +         + LF
Sbjct: 585 QGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLF 630


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 238/490 (48%), Gaps = 8/490 (1%)

Query: 122 YVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVY 181
           Y R   + +++ +   M D+   +S      L+  L  SN +   Y   + + G     Y
Sbjct: 189 YSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIK-VSGTPQSEY 247

Query: 182 --EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
               +++GL R+   ++A    +    + F P++V+ N I+ R C  G +  A S F ++
Sbjct: 248 TSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMM 307

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G  P+  +++ LI+  C    + +A  L N M    L PD++ Y+IL  G    G +
Sbjct: 308 LKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLI 367

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                ++   L +G   ++V ++ ++  +  IG+V  A++ Y  M++ GF  ++IS ++L
Sbjct: 368 NGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVL 427

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  LC+  ++  A  LF ++    L P L+TYS+LI G CK G+++    LY+ M    +
Sbjct: 428 LGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRI 487

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P++++   ++ GL     +  A  +F   +   L  ++ ++N ++DG  +     + VK
Sbjct: 488 IPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVK 547

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L+  +G   I P ++T   L+ G      LS A  L   +   GL P+ +TY+ +++   
Sbjct: 548 LYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYC 607

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +  N+   L +   M+   + P    Y V++  L K+  L  + +L   +   GL PD +
Sbjct: 608 EEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQV 667

Query: 595 TYNTIICGYC 604
           +YNTII  +C
Sbjct: 668 SYNTIIQAFC 677



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 253/522 (48%), Gaps = 52/522 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--------RLMSCLVDSNSVGQY 166
           Y+ LI      G + E++++   M + G  L PD+V         RL+  +  + ++ Q 
Sbjct: 319 YNILIHGLCIAGSMGEALDLKNDMENHG--LEPDMVTYNILAKGFRLLGLINGAWNIIQ- 375

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            K+           Y  L+ G  + G +E A  +++++I  GF  +I++   +L  LC +
Sbjct: 376 -KMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKS 434

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            Q+  A  LF  +   G +P+++T+STLI+  CK+ ++++A  LY  M    ++P+ +I+
Sbjct: 435 RQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIH 494

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
             ++ GL + G++ +        +   L LD+++++ ++D Y+  G+   AV+ Y ++  
Sbjct: 495 GAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGE 554

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P +++++ L+ G C   +L +A  L   + +  LEP+ +TY++L++ +C+ G ++ 
Sbjct: 555 KGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQS 614

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              L   M  + + P  +  +++I GL     + ++ +       + L P+   +NT++ 
Sbjct: 615 LLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQ 674

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI----------------------- 498
             C+ +      +L+  M ++N++P  +T+ +LI G                        
Sbjct: 675 AFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNL 734

Query: 499 ------------ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
                        ++G +  A++ F QM+++G    +  YSA+I  L K   ++   + F
Sbjct: 735 NKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFF 794

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
            +M  +GV PD  ++ VLLN   +  +L++  +L  ++   G
Sbjct: 795 CMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 31/244 (12%)

Query: 107 SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           ++G     Y+ +I+   +  K+ ES ++   M  +G  L+PD V          N++ Q 
Sbjct: 626 AIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVG--LTPDQVSY--------NTIIQA 675

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           +   R MR                      AF ++ +++     P  VT N ++   C+ 
Sbjct: 676 FCKARDMR---------------------KAFQLYDKMLLHNLEPTSVTYNILINGFCVY 714

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G + +A +L   L       N   ++T+I A C +  ++KA   +  M+E      +  Y
Sbjct: 715 GDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDY 774

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           S +I  L K   + E        L  G+  D  +F  +++A+   G +    +    M+ 
Sbjct: 775 SAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIK 834

Query: 347 GGFL 350
            G+L
Sbjct: 835 SGWL 838


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 226/439 (51%), Gaps = 8/439 (1%)

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           +L  A+       Y  +++GL + G  +     + +++     P ++T   ++  LC   
Sbjct: 96  RLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAH 155

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  A  +F+ ++  G KP+++ +S+LI+   K  ++++A +L +LM+     P  + Y+
Sbjct: 156 KVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYT 215

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            ++ GL K GR++E  + +     R L+  V  +S ++  Y+G+G V  A    + M + 
Sbjct: 216 SIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADR 275

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              P+ ISY++ I+ L   GR  EA  +F  ++ +  +P + TY  +ID FCK G +   
Sbjct: 276 DCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAA 335

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             +   M K  +KP+  + +++++G      + +AL  + + ++  ++P+   +NT+++ 
Sbjct: 336 THVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINA 395

Query: 463 CCRLKRATDTVKLFMLMG--MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
            C+LK+  + ++L   M      ++P ++T++++I G+   G    A  L  +M+  G+ 
Sbjct: 396 LCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI 455

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD  TY+++I  L     +S  + + + M + G+ PD   Y  L+ +L +  ++DAA  L
Sbjct: 456 PDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDL 514

Query: 581 FGQLTDRGLEPDIITYNTI 599
             ++   G  P+  T+  +
Sbjct: 515 LQEMMRNGHTPNEFTFKAV 533



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 208/434 (47%), Gaps = 14/434 (3%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV-- 238
           +  L+ G   +   E    + R++  RG   N  T   IL  LC    +  A S F+   
Sbjct: 32  FNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSYFNSRT 91

Query: 239 -----LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
                L      P+ VT++ +++   K    +   + Y  M+     P L+ Y++L+DGL
Sbjct: 92  EEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGL 151

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            KA +++   ++    + +G K D++ +SS++D     G V  A +  D M+  G  P  
Sbjct: 152 CKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTA 211

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++Y+ ++ GLC+ GR+ EA     ++  RRL P + TYS ++ G+   GK+ + F++ + 
Sbjct: 212 VAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEE 271

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI-----PNLFIFNTLMDGCCRLKR 468
           M  R   PD +  ++ I  L     R   + V  T++     P++  +  ++D  C+   
Sbjct: 272 MADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGS 331

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 +  LM    +KP+   +T+++ G      L  A+ L+ ++LK G+ P  +TY+ 
Sbjct: 332 MAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNT 391

Query: 529 IIHGLFKGKNISVGLHMFKLMER--NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           +I+ L K K +   L + + M+R    + P I  Y+++++ L K    + A  L  ++ D
Sbjct: 392 VINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMID 451

Query: 587 RGLEPDIITYNTII 600
            G+ PD  TY ++I
Sbjct: 452 NGVIPDCFTYTSLI 465



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 190/402 (47%), Gaps = 7/402 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P+ VT   I+  L   G        ++ ++    +P ++T++ L++  CK  K+E+A  
Sbjct: 103 APDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACD 162

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           ++  M+     PD+I YS LIDGL KAGR+ E  +L+   + RG     V ++S++    
Sbjct: 163 VFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLC 222

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G +  AV+T   M      P V +YS ++ G    G++ EA  +  ++  R   P  +
Sbjct: 223 KCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTI 282

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQS 444
           +Y+  I+     G+  +   +++ M+++G KPD     ++I+     G M  A       
Sbjct: 283 SYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLM 342

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            +  + PN +I+  +MDG  +  R  + ++L+  +    I P  +T+  +I  +     +
Sbjct: 343 DKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKM 402

Query: 505 SSAILLFFQMLKRG--LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
             A+ L  +M +R   L P ++TYS IIHGL K         +   M  NGV PD   Y 
Sbjct: 403 DEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYT 462

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L+  L     +  A++L  ++   G+ PD  TY T++   C
Sbjct: 463 SLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILC 504



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 205/436 (47%), Gaps = 50/436 (11%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+  L+R G + +A    +  I     PN+ + N +L+           ++L   +   G
Sbjct: 3   LLLALVRGGQLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKARG 59

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYN-------LMMEMDLVPDLIIYSILIDGLFKA 296
              N  T   +++A C    L+KA   +N        + E    PD + Y+ ++DGLFKA
Sbjct: 60  ITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKA 119

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G    G                                   ++ Y++M+     P +++Y
Sbjct: 120 GNYDAG-----------------------------------LEYYEKMVASKCEPTLLTY 144

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           ++L+ GLC+  ++  AC +F +++ +  +P ++ YSSLIDG  K+G++ +   L D MI 
Sbjct: 145 TVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIA 204

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           RG  P AV  + ++ GL     + +A++   +  R  L P +  ++ ++ G   + +  +
Sbjct: 205 RGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEE 264

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              +   M   +  PD I++T+ I  + S G    A  +F  M+++G  PD+ TY  II 
Sbjct: 265 AFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIID 324

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
              K  +++   H+ +LM++  V P+  IY ++++  +K   L+ AL+L+ ++   G+ P
Sbjct: 325 NFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILP 384

Query: 592 DIITYNTIICGYCSLN 607
             +TYNT+I   C L 
Sbjct: 385 STVTYNTVINALCKLK 400



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 215/505 (42%), Gaps = 92/505 (18%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
            AI+  L K  N    +++++        P +     L+  L ++   + A  VF++M+ 
Sbjct: 110 TAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIR 169

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG------IYLS 146
           +  K         D +      YS LI+   + G++DE+ ++   M   G       Y S
Sbjct: 170 KGHKP--------DIIA-----YSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTS 216

Query: 147 PDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             +V  L  C     +V    ++ R         Y F++ G +  G +E AF +  ++  
Sbjct: 217 --IVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMAD 274

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           R   P+ ++    ++ L   G+   A  +F+ ++  G KP++ T+  +I+ FCKE  +  
Sbjct: 275 RDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAA 334

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  +  LM +  + P+  IY++++DG  K+ RL+E  EL                     
Sbjct: 335 ATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALEL--------------------- 373

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR--L 384
                         Y R+L  G LP+ ++Y+ +I  LC+  ++ EA  L  ++  R+  L
Sbjct: 374 --------------YQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL 419

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQS 444
           EPS++TYS +I G  K G     F L   MI  G+ PD    + LI  L G         
Sbjct: 420 EPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAG------- 472

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
                               ++ RA + ++  +  G++   PD  T+  L++ I  +  +
Sbjct: 473 --------------------KVSRAMELLEEMLKAGIF---PDDHTYGTLVQ-ILCRSDV 508

Query: 505 SSAILLFFQMLKRGLTPDVITYSAI 529
            +A  L  +M++ G TP+  T+ A+
Sbjct: 509 DAAWDLLQEMMRNGHTPNEFTFKAV 533



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 145/335 (43%), Gaps = 37/335 (11%)

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P++  ++IL+ G       +  N LL     RG+  +      ++ A     D+ +AV  
Sbjct: 27  PNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSY 86

Query: 341 YD-------RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           ++       R+      P+ ++Y+ ++ GL + G        + +++  + EP+LLTY+ 
Sbjct: 87  FNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTV 146

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNL 453
           L+DG CK+ K+     +++ MI++G KPD +                             
Sbjct: 147 LVDGLCKAHKVERACDVFEEMIRKGHKPDIIA---------------------------- 178

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +++L+DG  +  R  +  KL  LM      P  + +T ++ G+   G +  A+    +
Sbjct: 179 --YSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQE 236

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M +R L P V TYS I+ G      +     + + M     APD   Y + +  L     
Sbjct: 237 MRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGR 296

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            + A K+F  + ++G +PD+ TY  II  +C   S
Sbjct: 297 REEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGS 331


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 194/377 (51%), Gaps = 10/377 (2%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
            F+M  +++  GF  N+   N ++ + C  G I +A  +FD +     +P VV+F+TLIN
Sbjct: 226 GFYM--EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN 283

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
            +CK   L++ F+L + M +    PD+  YS LI+ L K  ++   + L      RGL  
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP 343

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           + V+F++++  +   G++    ++Y +ML+ G  P+++ Y+ L+ G C+ G LV A  + 
Sbjct: 344 NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLIN 431
             ++ R L P  +TY++LIDGFC+ G +     +   M + G++ D     A+VC +   
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463

Query: 432 GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           G + DA R   + +R  + P+   +  +MD  C+   A    KL   M      P V+T+
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            VL+ G+   G + +A +L   ML  G+ PD ITY+ ++ G  +  N S     +     
Sbjct: 524 NVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSS---KRYIQKPE 580

Query: 552 NGVAPDIAIYNVLLNML 568
            G+  D+A Y  ++N L
Sbjct: 581 IGIVADLASYKSIVNEL 597



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 144/607 (23%), Positives = 269/607 (44%), Gaps = 77/607 (12%)

Query: 8   LLTVWRSINKCYCSESKTHISDLQFNQANAILANL---IKTNNPTPAIQFFKWTHNCVSS 64
           LL+ W      Y  ES +       N  + +L  L   I+ +   P ++F  +T +C   
Sbjct: 25  LLSTW------YSQESVSAAD----NDDDPVLVKLSVAIRDSYKDPPLEFSSFT-DC--- 70

Query: 65  PNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVR 124
           P+I +++  L    + D+ +H  + + +     + FF+      G     + F +E Y  
Sbjct: 71  PSIRKVLPSLSVHHVVDLINH--NPLSLPQRSIFAFFKFISSQPG-----FRFTVETYFV 123

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD---SNSVGQYYKLCRAMRGKGFCVY 181
           + +     E+F               Q L+  +V     NS    +     MR    C  
Sbjct: 124 LARFLAVHEMFTE------------AQSLIELVVSRKGKNSASSVFISLVEMRVTPMC-- 169

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
            FL++ L+                  GF+P+ + C ++ ++   +  I    +L D ++ 
Sbjct: 170 GFLVDALMI------------TYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMK 217

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           + P   +  F   I        L+  F L           ++ +++IL++   K G + +
Sbjct: 218 LNPTGTIWGFYMEI--------LDAGFPL-----------NVYVFNILMNKFCKEGNISD 258

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             ++      R L+  VV F+++++ Y  +G++    +   +M      P+V +YS LI 
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
            LC++ ++  A GLF ++  R L P+ + +++LI G  ++G++      Y  M+ +GL+P
Sbjct: 319 ALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQP 378

Query: 422 DAVVCSLLINGLM--GD--ALRFFFQS-VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D V+ + L+NG    GD  A R      +R  L P+   + TL+DG CR       +++ 
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIR 438

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    I+ D +  + L+ G+  +G +  A     +ML+ G+ PD +TY+ ++    K 
Sbjct: 439 KEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKK 498

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
            +   G  + K M+ +G  P +  YNVLLN L K   +  A  L   + + G+ PD ITY
Sbjct: 499 GDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITY 558

Query: 597 NTIICGY 603
           NT++ G+
Sbjct: 559 NTLLEGH 565



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 155/302 (51%), Gaps = 5/302 (1%)

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           LD G  L+V VF+ +M+ +   G++  A + +D +      P V+S++ LI G C+ G L
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            E   L  Q+   R  P + TYS+LI+  CK  K+     L+D M KRGL P+ V+ + L
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351

Query: 430 INGLMG----DALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I+G       D ++  +Q +    L P++ ++NTL++G C+         +   M    +
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           +PD IT+T LI G    G + +A+ +  +M + G+  D + +SA++ G+ K   +     
Sbjct: 412 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 471

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             + M R G+ PD   Y ++++   K+ +     KL  ++   G  P ++TYN ++ G C
Sbjct: 472 ALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLC 531

Query: 605 SL 606
            L
Sbjct: 532 KL 533



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 158/302 (52%), Gaps = 7/302 (2%)

Query: 310 LDRGLKLDVVVFS--SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
           L R  + DV +    +++D  + +   G     Y  +L+ GF  NV  ++IL+   C++G
Sbjct: 195 LSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEG 254

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
            + +A  +F ++  R L+P+++++++LI+G+CK G L +GF L   M K   +PD    S
Sbjct: 255 NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314

Query: 428 LLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            LIN L     M  A   F +  +  LIPN  IF TL+ G  R        + +  M   
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            ++PD++ +  L+ G    G L +A  +   M++RGL PD ITY+ +I G  +G ++   
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L + K M++NG+  D   ++ L+  + KE  +  A +   ++   G++PD +TY  ++  
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494

Query: 603 YC 604
           +C
Sbjct: 495 FC 496



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 46/98 (46%)

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
            + ++L  G   +V  ++ +++   K  NIS    +F  + +  + P +  +N L+N   
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           K  NLD   +L  Q+      PD+ TY+ +I   C  N
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKEN 324


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/567 (22%), Positives = 261/567 (46%), Gaps = 54/567 (9%)

Query: 48  PTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVF--DKMV---IQFGKTYNFFR 102
           P+PA    +     ++  ++A+   ++ +S  R  A  V+   K++    + G+T +  R
Sbjct: 35  PSPASSRLRRL---IARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAAR 91

Query: 103 LFRDSLGDFGC----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
           + R + G         Y+ L+  Y R G++D +  + A M      + PD          
Sbjct: 92  VLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP-----VPPDAY-------- 138

Query: 159 DSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
                                 Y  L+ GL  +G + +A  +   +++R   P++VT   
Sbjct: 139 ---------------------TYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTV 177

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           +L+ +C +   G A  + D +   G  PN+VT++ +IN  C+E +++ A Q+ N +    
Sbjct: 178 LLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYG 237

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             PD + Y+ ++ GL  A R ++   L    ++     + V F  ++  +   G V RA+
Sbjct: 238 FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAI 297

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           +  DRM   G   N    +I+I  +C+QGR+ +A      +      P  ++Y++++ G 
Sbjct: 298 EVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGL 357

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNL 453
           C++G+  D   L + M+++   P+ V     +C L   GL+  A+    Q         +
Sbjct: 358 CRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGI 417

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +N L++G C   R    ++LF  +     +P+ IT+T L+ G+     L +A  L  +
Sbjct: 418 VTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAE 474

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M++     +V+T++ ++    +   +   + + + M  +G  P++  +N LL+ + ++CN
Sbjct: 475 MMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCN 534

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTII 600
            + AL+L   L  +G+  D ITY++I+
Sbjct: 535 SEEALELLHGLVSKGISLDTITYSSIV 561



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 205/457 (44%), Gaps = 46/457 (10%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L+ +  +  A  +  +   RG  P++  C K+++ LC  G+  +A+ +       G   +
Sbjct: 45  LIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVD 104

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           V  ++TL+  +C+  +L+ A +L   +  M + PD   Y+ LI GL   GR+ +   LL 
Sbjct: 105 VFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLD 161

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ---------------TYDRMLNG----- 347
             L R  +  VV ++ +++A       G+A++               TY+ ++NG     
Sbjct: 162 DMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRED 221

Query: 348 ---------------GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
                          GF P+ +SY+ ++KGLC   R  +   LF +++     P+ +T+ 
Sbjct: 222 RVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFD 281

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRM 447
            L+  FC+ G +     + D M + G   +  +C+++IN     G + DA  F       
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSY 341

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
              P+   + T++ G CR  R  D  +L   M   N  P+ +T    I  +  +G +  A
Sbjct: 342 GCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQA 401

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
           ILL  QM + G +  ++TY+A+++G      +   L +F  +      P+   Y  LL  
Sbjct: 402 ILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTG 458

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L     LDAA +L  ++       +++T+N ++  +C
Sbjct: 459 LCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFC 495



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 157/338 (46%), Gaps = 13/338 (3%)

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           + + G+  + F  F +++G +GC      Y+ +++   R G+ +++ E+   M       
Sbjct: 322 ICKQGRVDDAFE-FLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPP 380

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMH 201
           +       +  L     + Q   L   M   G  V    Y  L+NG   +G +++A  + 
Sbjct: 381 NEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELF 440

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
             +      PN +T   +L  LC   ++  A+ L   ++      NVVTF+ L++ FC++
Sbjct: 441 NSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQK 497

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
             +E+A +L   MME    P+LI ++ L+DG+ +    +E  ELL   + +G+ LD + +
Sbjct: 498 GFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITY 557

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           SS++D       +  AVQ +  + + G  P  + Y+ ++  LC++     A   F  ++ 
Sbjct: 558 SSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVS 617

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
               P+  TY  LI+G  + G L++   +   +  RG+
Sbjct: 618 NSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNT 458
           L +   L +    RG  PD  +C+ LI      G   DA R    +       ++F +NT
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+ G CR  R     +L   M    + PD  T+T LIRG+  +G +  A+ L   ML+R 
Sbjct: 111 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             P V+TY+ ++  + K       + +   M   G  P+I  YNV++N + +E  +D A 
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCS 605
           ++  +L+  G +PD ++Y T++ G C+
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCA 254


>gi|26449752|dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
          Length = 593

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 210/426 (49%), Gaps = 9/426 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           ++  +M  L  +G ++ A  + +++I  G +P ++T N +L  LC  G I  A  L   +
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             +GP PN V+++TLI   C    ++KA  L+N M +  + P+ +  +I++  L + G +
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242

Query: 300 KEGNELLLTAL----DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
              N+ LL  +         LD+V+ + +MD+    G+V +A++ +  M       + + 
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+++I+GLC  G +V A G    ++ R + P + TY++LI   CK GK  +   L+  M 
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362

Query: 416 KRGLKPDAVVCSLLINGL--MGDALR---FFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G+ PD +   ++I GL   GD  R   F    ++ +L+P + ++N ++DG  R    +
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + +  LM  Y +KP+V T+  LI G    G L  A  +  +M    + PD  TY+ ++
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
                  ++ +   ++  M R G  PDI  Y  L+  L  +  L  A  L  ++   G+ 
Sbjct: 483 GAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGIT 542

Query: 591 PDIITY 596
            D + +
Sbjct: 543 IDHVPF 548



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 186/371 (50%), Gaps = 10/371 (2%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           G   +  L+NGL + G IE A  + R++ + G  PN V+ N ++K LC    +  A  LF
Sbjct: 155 GLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLF 214

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKL----EKAFQLYNLMMEMDLVPDLIIYSILIDG 292
           + +   G +PN VT + +++A C++  +    +K  +      + +   D++I +IL+D 
Sbjct: 215 NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDS 274

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
            FK G + +  E+      + +  D VV++ ++      G++  A      M+  G  P+
Sbjct: 275 CFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPD 334

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V +Y+ LI  LC++G+  EAC L G +    + P  ++Y  +I G C  G +        
Sbjct: 335 VFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLL 394

Query: 413 NMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           +M+K  L P+ ++ +++I+G    GD   AL      +   + PN++  N L+ G  +  
Sbjct: 395 SMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  D   +   M    I PD  T+ +L+    + G L  A  L+ +ML+RG  PD+ITY+
Sbjct: 455 RLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYT 514

Query: 528 AIIHGL-FKGK 537
            ++ GL +KG+
Sbjct: 515 ELVRGLCWKGR 525



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 162/327 (49%), Gaps = 8/327 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL----- 169
           Y+ LI+    +  +D+++ +F  M+  GI  +      ++  L     +G   K      
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEI 253

Query: 170 ---CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
               +A       +   LM+   + G +  A  + +++ Q+    + V  N I++ LC +
Sbjct: 254 LDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSS 313

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A      ++  G  P+V T++TLI+A CKE K ++A  L+  M    + PD I Y
Sbjct: 314 GNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISY 373

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            ++I GL   G +   NE LL+ L   L  +V++++ V+D Y   GD   A+   + ML+
Sbjct: 374 KVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLS 433

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PNV + + LI G  + GRL++A  +  ++   ++ P   TY+ L+   C  G LR 
Sbjct: 434 YGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRL 493

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL 433
            F LYD M++RG +PD +  + L+ GL
Sbjct: 494 AFQLYDEMLRRGCQPDIITYTELVRGL 520



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 187/401 (46%), Gaps = 52/401 (12%)

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S+++   C + KL+ A  L   M+   ++P LI ++ L++GL KAG +++ + L+    +
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
            G   + V +++++     + +V +A+  ++ M   G  PN ++ +I++  LCQ+G +  
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI-- 242

Query: 372 ACGLFGQVLIRRLEPS--------LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
             G   + L+  +  S        ++  + L+D   K+G +     ++  M ++ +  D+
Sbjct: 243 --GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           VV +++I GL     M  A  F    V+  + P++F +NTL+   C+  +  +   L   
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSL---------------------------------- 504
           M    + PD I++ V+I+G+   G +                                  
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420

Query: 505 -SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
            SSA+ +   ML  G+ P+V T +A+IHG  KG  +     +   M    + PD   YN+
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           LL       +L  A +L+ ++  RG +PDIITY  ++ G C
Sbjct: 481 LLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLC 521



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 147/293 (50%), Gaps = 9/293 (3%)

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           + SS+M      G +  A+    +M+  G +P +I+++ L+ GLC+ G + +A GL  ++
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLM 434
                 P+ ++Y++LI G C    +     L++ M K G++P+ V C+++++     G++
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242

Query: 435 GDA----LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           G+     L     S +     ++ I   LMD C +       ++++  M   N+  D + 
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           + V+IRG+ S G++ +A      M+KRG+ PDV TY+ +I  L K         +   M+
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             GVAPD   Y V++  L    +++ A +    +    L P+++ +N +I GY
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGY 415



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 45/320 (14%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQYYKLC---- 170
           + L+++  + G + +++E++  MS   +     +   ++  L  S N V  Y  +C    
Sbjct: 269 TILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK 328

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           R +    F  Y  L++ L ++G  + A  +H  +   G  P+ ++   I++ LCI+G + 
Sbjct: 329 RGVNPDVF-TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387

Query: 231 NAS-----------------------------------SLFDVLLLVGPKPNVVTFSTLI 255
            A+                                   S+ +++L  G KPNV T + LI
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           + + K  +L  A+ + N M    + PD   Y++L+      G L+   +L    L RG +
Sbjct: 448 HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ 507

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D++ ++ ++      G + +A     R+   G   + + + IL K   +  R  EA  +
Sbjct: 508 PDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLV 567

Query: 376 FGQVLIRRLE----PSLLTY 391
           + + L  R      PS+L +
Sbjct: 568 YKKWLATRNRGVSCPSILNH 587



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 39/192 (20%)

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           L I +++M   C   +    + L   M    + P +ITH  L+ G+   G +  A  L  
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP---------------- 556
           +M + G +P+ ++Y+ +I GL    N+   L++F  M + G+ P                
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240

Query: 557 -----------------------DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
                                  DI I  +L++   K  N+  AL+++ +++ + +  D 
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300

Query: 594 ITYNTIICGYCS 605
           + YN II G CS
Sbjct: 301 VVYNVIIRGLCS 312



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 46/83 (55%)

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           +S+I+  L     +   L + K M  +GV P +  +N LLN L K   ++ A  L  ++ 
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183

Query: 586 DRGLEPDIITYNTIICGYCSLNS 608
           + G  P+ ++YNT+I G CS+N+
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNN 206


>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
          Length = 807

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 259/536 (48%), Gaps = 17/536 (3%)

Query: 86  VFDKMVIQFGKTYNFFRLFRD--SLGDFGCDYS--FLIENYVRIGKIDESVEIFAYMSDM 141
            +D ++    K      +F++  S G    DYS   LI+   + GKI E++         
Sbjct: 184 TYDSLLYSLRKADVALAIFKEMESCGIPPSDYSHGILIDGLCKQGKIGEALSFLQETRKE 243

Query: 142 GIYLSPDLV-QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIEN 196
           G +    +    LMS L +   +     +   M   G       Y  +++GL + G +  
Sbjct: 244 GKFKPLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNE 303

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF + + V + G   +IVTCN ++    ++G       + +++  +G +P+VVT++ LI 
Sbjct: 304 AFDIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILIT 363

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C+   +E+  ++   ++   +  +++ YS+LI+ LFK G   E   L       GL+L
Sbjct: 364 GHCEGGDVEEGMRIRKDILGQGIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLEL 423

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRM-LNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
           DV+ +S ++  +  +G++GRA+Q ++ M  +   +P  +++  ++ GLC++G L EA   
Sbjct: 424 DVIAYSILIHGFCKLGEIGRALQVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARSY 483

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
              V  +     ++ Y+ +IDG+ K G + +   LYD +I  G+ P  V C+ L+ G   
Sbjct: 484 LETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCK 543

Query: 434 MGD--ALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            GD      +F +++++ L+P    + TLMD      +    + +F  M    I+P+ IT
Sbjct: 544 FGDLHMAESYFMAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAIT 603

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           ++V+I+G+  Q     A  +   M + G   D I Y+ +I G  + ++     ++++LM 
Sbjct: 604 YSVVIKGLCKQLMFHDAKNVLDDMYREGFDADPIPYNTLIQGFCETQDAKNAFYVYELMV 663

Query: 551 RNGVAPDIAIYNVLLNML-IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             GV P    YN+L+N+L +K   + A +KL      +G E     Y T+I   C+
Sbjct: 664 CRGVMPSPVTYNLLVNVLCLKGLVIHAEMKL-ESFRKQGAELRKFAYTTLIKAQCA 718



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 228/495 (46%), Gaps = 45/495 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    ++G ++E+ +IF  +++ G+ L       L++         +  K+   MR
Sbjct: 288 YSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMR 347

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G G       Y  L+ G    G +E    + + ++ +G   NIVT + ++  L   G   
Sbjct: 348 GLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVTYSVLINALFKKGLFY 407

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM-EMDLVPDLIIYSIL 289
              +LF  +  +G + +V+ +S LI+ FCK  ++ +A Q++NLM     ++P  + +  +
Sbjct: 408 EVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVWNLMCCSQRVIPTSVNHVSI 467

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           + GL K G L E    L T   +    DVV+++ V+D Y  +GD+G AVQ YD ++  G 
Sbjct: 468 LLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGM 527

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P +++ + L+ G C+ G L  A   F  + +  L P+ +TY++L+D   ++GK+    S
Sbjct: 528 CPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLS 587

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           ++  M  +G++P+A+  S++I GL       DA        R     +   +NTL+ G C
Sbjct: 588 IFKEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVLDDMYREGFDADPIPYNTLIQGFC 647

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITH--------------------------------- 491
             + A +   ++ LM    + P  +T+                                 
Sbjct: 648 ETQDAKNAFYVYELMVCRGVMPSPVTYNLLVNVLCLKGLVIHAEMKLESFRKQGAELRKF 707

Query: 492 --TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
             T LI+   ++G    AI+   ++L  G    +  +SA I+ L K +     L +  +M
Sbjct: 708 AYTTLIKAQCAKGMPYKAIMWVGKLLDAGFEASIEDFSAAINRLCKRQFTREALMLISIM 767

Query: 550 ERNGVAPDIAIYNVL 564
              GV PDI +Y VL
Sbjct: 768 LSVGVYPDIQLYRVL 782



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 32/324 (9%)

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV-GIGDVGRAVQTYDRML 345
           SI+ D L  +    + N   L  L +   L++ +  +  D+ +  +     A+  +  M 
Sbjct: 147 SIVWDALANSYARAQMNHDALYVLSKMNSLNMQISITTYDSLLYSLRKADVALAIFKEME 206

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKL 404
           + G  P+  S+ ILI GLC+QG++ EA     +     + +P  +T+++L+   C  G +
Sbjct: 207 SCGIPPSDYSHGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALCNWGFI 266

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           +D  S++  M+K GL P                        R T       ++T++ G C
Sbjct: 267 QDAKSVFCLMLKYGLNPS-----------------------RHT-------YSTIIHGLC 296

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           ++    +   +F  +    ++ D++T   LI G    G       +   M   G+ PDV+
Sbjct: 297 KVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDVV 356

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY+ +I G  +G ++  G+ + K +   G+  +I  Y+VL+N L K+        LFG++
Sbjct: 357 TYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVTYSVLINALFKKGLFYEVENLFGEI 416

Query: 585 TDRGLEPDIITYNTIICGYCSLNS 608
              GLE D+I Y+ +I G+C L  
Sbjct: 417 CSIGLELDVIAYSILIHGFCKLGE 440



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 163/367 (44%), Gaps = 45/367 (12%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           ++ T+ +L+ +     K + A  ++  M    + P    + ILIDGL K G++ E     
Sbjct: 181 SITTYDSLLYSL---RKADVALAIFKEMESCGIPPSDYSHGILIDGLCKQGKIGEA---- 233

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
           L+ L    K                               G F P  ++++ L+  LC  
Sbjct: 234 LSFLQETRK------------------------------EGKFKPLGMTFNTLMSALCNW 263

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G + +A  +F  +L   L PS  TYS++I G CK G + + F ++ ++ + G++ D V C
Sbjct: 264 GFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTC 323

Query: 427 SLLINGL-MGDALRFFFQSVRMT----LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + LING  +    R   + + M     + P++  +  L+ G C      + +++   +  
Sbjct: 324 NSLINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILG 383

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             I+ +++T++VLI  +  +G       LF ++   GL  DVI YS +IHG  K   I  
Sbjct: 384 QGIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGR 443

Query: 542 GLHMFKLM--ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
            L ++ LM   +  +   +   ++LL  L K+  LD A      +  +    D++ YN +
Sbjct: 444 ALQVWNLMCCSQRVIPTSVNHVSILLG-LCKKGFLDEARSYLETVASKYQPSDVVLYNVV 502

Query: 600 ICGYCSL 606
           I GY  +
Sbjct: 503 IDGYAKV 509


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 236/503 (46%), Gaps = 45/503 (8%)

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
           I  + R G  D +++ F   SD+G                               R  G 
Sbjct: 40  IGAFARAGSADRALKTFYRASDLGC------------------------------RDPGV 69

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            VY  L++ LLR+ ++     ++  + + G  PN+ T N +++ LC N ++  A  + D 
Sbjct: 70  RVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDE 129

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G  P+ V+  T+++  CK  ++E+A          + VP    Y+ ++  L    R
Sbjct: 130 MSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL-----AETVPVQASYNAVVHALCGEFR 184

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + E   ++   + RGL+ +VV +++++DA+    ++  A     RM++ G  PNV++++ 
Sbjct: 185 MWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTA 244

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+KG  + G++ +A  ++  ++     PS ++Y+ LI G C  G L+     +++M +  
Sbjct: 245 LVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNA 304

Query: 419 LKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           L P+A   S L++G    GD   A+  + +       PN+ ++  ++D  C+        
Sbjct: 305 LLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAE 364

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M M N  P+ +T   LI  +   G +  A+ +F  M + G  P+  TY+ ++HGL
Sbjct: 365 SLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGL 424

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           F+  N      M   M  NG    +  YN ++N L + C    A+ L G++  +G++PD 
Sbjct: 425 FREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDA 484

Query: 594 ITYNTIICGYC-----SLNSCLI 611
            T+N II  YC     S+ +CL+
Sbjct: 485 FTFNAIIHAYCKEGKVSIAACLL 507



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/526 (23%), Positives = 232/526 (44%), Gaps = 35/526 (6%)

Query: 69  QLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKI 128
            L+  LL+ +M      V+D M  + G   N +             Y+ LI    +  ++
Sbjct: 74  HLLDALLRENMVGAVVPVYDNMR-KAGVDPNVY------------TYNLLIRALCQNDRV 120

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF--------CV 180
           D + ++   MS  G +  PD V            V    KL R    +GF          
Sbjct: 121 DAARKMLDEMSRKGCH--PDEVSH-------GTIVSGMCKLGRVEEARGFLAETVPVQAS 171

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  +++ L  +  +   F +  +++QRG  PN+VT   I+   C   ++  A ++   ++
Sbjct: 172 YNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMV 231

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +G  PNV+TF+ L+  F ++ K+  A  +++ M++    P  I Y++LI GL   G LK
Sbjct: 232 SMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLK 291

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              +   +     L  +   +S+++D +   GD+  A+  ++ M + G  PNV+ Y+ +I
Sbjct: 292 GALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMI 351

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC++    +A  L  ++L+    P+ +T+++LI   C  G++    +++  M + G  
Sbjct: 352 DVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCH 411

Query: 421 PDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+    + L++GL       DA     + +      +L  +NT+++  C++      + L
Sbjct: 412 PNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLL 471

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M +  I+PD  T   +I     +G +S A  L  QM       +V+ Y+ +I  L  
Sbjct: 472 LGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCN 531

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
              +S  +     M   G+ P+ A +NVL+  +         + LF
Sbjct: 532 QGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLF 577


>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13800-like [Brachypodium distachyon]
          Length = 821

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 227/475 (47%), Gaps = 25/475 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS+LI +Y ++G + + ++ +  M   G+  +  ++  L+ C        Q  +  +  R
Sbjct: 333 YSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFR 392

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G  +    Y   M+   + G ++ A  +  +++  G  P+ +    ++K  C+ G I 
Sbjct: 393 DSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQ 452

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA   F+ +L    KP+VVT++ L +   K   + + F L   M +  L P+ + Y ++I
Sbjct: 453 NARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVI 512

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  +   L E   L     ++G+    V++SS++  Y+  G    A   + R+   G L
Sbjct: 513 DGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKL 572

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +  S S LI  LC+ G    A  +   +L +   P L++YS LI  +C++G +R+    
Sbjct: 573 VDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLW 632

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMD---- 461
           + +M++RGL  D +V ++L+N     GLM +A   F Q   + + P++  +  L+D    
Sbjct: 633 FHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHLK 692

Query: 462 --------GCCRLKRA----TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
                   G  R KR+        +L   M    I+PDV  +TVLI G      L  A  
Sbjct: 693 EDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARG 752

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           LF +ML++GLTPD   Y+A+I+G      ++    +F+ M   G+ PD+  ++VL
Sbjct: 753 LFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVL 807



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/552 (24%), Positives = 246/552 (44%), Gaps = 38/552 (6%)

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
            A     ++V+       FFRL  D+          +  +  +  K D++ +++  M +M
Sbjct: 200 AAESCDSEIVLSAYDEMKFFRLTLDAHS-----LRIITRSLFQEKKADKAFKVWVEMIEM 254

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQ----YYKLCRAMRGK---GFCVYEFLMNGLLRKGVI 194
           G+   PD V    S ++     G+    Y  L   +R K       +  +M+GL ++  +
Sbjct: 255 GV--KPD-VHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRL 311

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           E    +    +++G  P+I   + +++  C  G +      +  ++  G + N    S L
Sbjct: 312 EEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYL 371

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           +  F K     +  + +    +  L  D ++Y+I +D   K G + E  +LL   +  GL
Sbjct: 372 LQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGL 431

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             D + ++ ++  Y   GD+  A Q ++ ML     P+V++Y+IL  GL ++G ++E   
Sbjct: 432 SPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFD 491

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-----DAVVCSLL 429
           L G +  R L+P+ LTY  +IDGFC+   L +   L++ + ++G+        ++VC  L
Sbjct: 492 LIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYL 551

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
             G   +A   F +  +   + + F  + L+   CR   +     +   M   N  PD+I
Sbjct: 552 HKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLI 611

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           +++ LI      G + +A L F  M++RGL  DVI Y+ +++G  K   +     +F  M
Sbjct: 612 SYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQM 671

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAAL-----------------KLFGQLTDRGLEPD 592
              G+ PDI  Y VLL+  +KE +L                     +L   + +  +EPD
Sbjct: 672 TSLGIKPDIIAYTVLLDGHLKE-DLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPD 730

Query: 593 IITYNTIICGYC 604
           +  Y  +I G C
Sbjct: 731 VPCYTVLIDGQC 742



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 209/486 (43%), Gaps = 27/486 (5%)

Query: 145 LSPDLVQRLMSCLVDSNSVG-QYYKLCRAMRGK-GFCVYEFLMNGLLRKGVIENAFHMHR 202
           LSP  V + + CL    ++   Y+K   ++  +  F  Y  +++ L   G     F +  
Sbjct: 65  LSPANVVKTLQCLKRRPAIAFAYFKDAESVGFRHDFSTYAEIVHILSHSGQGRMLFSLFC 124

Query: 203 QVIQ--RGFVPNIVTCNKILKRLCING------------------QIGNASSLFDVLLLV 242
           +++    G  P IV     LKR C                        +   LF  L  +
Sbjct: 125 EIVSPTSGGGPEIVPLMDQLKRTCTTSYPLLFATNCLITACTTCCDARDTIGLFGELCRL 184

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P V T + L+    +    E     Y+ M    L  D     I+   LF+  +  + 
Sbjct: 185 GVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHSLRIITRSLFQEKKADKA 244

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            ++ +  ++ G+K DV   SS +      G +  A      ++        I++++++ G
Sbjct: 245 FKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDG 304

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           LC++ RL E   L    + + L P +  YS LI  +CK G L      Y  M+  GL+ +
Sbjct: 305 LCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEAN 364

Query: 423 AVVCSLLINGL----MGDALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
             + S L+       M   +  +FQ  R + L  +  ++N  MD  C+L    + VKL  
Sbjct: 365 CHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLG 424

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    + PD I +T LI+G   +G + +A   F +MLK  + PDV+TY+ +  GL K  
Sbjct: 425 EMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRG 484

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +     +   ME  G+ P+   Y V+++   +  NL  A  LF  + ++G++   + Y+
Sbjct: 485 LVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYS 544

Query: 598 TIICGY 603
           +++CGY
Sbjct: 545 SMVCGY 550



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 40/271 (14%)

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA-----VVCSL 428
           GLFG++    + P + T + L+    +S       S YD M    L  DA     +  SL
Sbjct: 176 GLFGELCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHSLRIITRSL 235

Query: 429 LINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                   A + + + + M + P++   ++ + G C   +      +   +    ++ + 
Sbjct: 236 FQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEA 295

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN---------- 538
           I   V++ G+  +  L     L    +++GLTPD+  YS +I    K  N          
Sbjct: 296 IAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQA 355

Query: 539 -ISVGLHM------------------------FKLMERNGVAPDIAIYNVLLNMLIKECN 573
            +S GL                          F+    +G+  D  +YN+ ++   K  N
Sbjct: 356 MVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGN 415

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +D A+KL G++   GL PD I Y  +I GYC
Sbjct: 416 MDEAVKLLGEMMTVGLSPDRIHYTCLIKGYC 446



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 82/175 (46%)

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           D +  F +  R+ ++P ++  N L+        +   +  +  M  + +  D  +  ++ 
Sbjct: 173 DTIGLFGELCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHSLRIIT 232

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           R +  +     A  ++ +M++ G+ PDV  +S+ I GL +   I +   + + + R  V 
Sbjct: 233 RSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQ 292

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
            +   +NV+++ L KE  L+   KL      +GL PDI  Y+ +I  YC + + L
Sbjct: 293 VEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLL 347



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 16/218 (7%)

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIK--RGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
           TY+ ++     SG+ R  FSL+  ++    G  P+ V        LM    R        
Sbjct: 102 TYAEIVHILSHSGQGRMLFSLFCEIVSPTSGGGPEIV-------PLMDQLKR-----TCT 149

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
           T  P LF  N L+  C     A DT+ LF  +    + P V T  +L++  A++   S  
Sbjct: 150 TSYPLLFATNCLITACTTCCDARDTIGLFGELCRLGVVPPVWTCNILLK-FAAESCDSEI 208

Query: 508 ILLFFQMLKR-GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           +L  +  +K   LT D  +   I   LF+ K       ++  M   GV PD+  ++  + 
Sbjct: 209 VLSAYDEMKFFRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFII 268

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L +   +D A  +  ++    ++ + I +N ++ G C
Sbjct: 269 GLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLC 306


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 209/420 (49%), Gaps = 6/420 (1%)

Query: 192 GVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
           G ++ A  + R +    G  P++V+ N +LK LC+  + G    L + ++ VG  PNVVT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           F+TLI   C+    E+  Q+   M++    PD+ +Y+ ++DG+ K G L+  +E+L    
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
             GLK +VV +++V+          +A +    M +     + ++++IL+   CQ G + 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
               L  Q+L     P ++TY+++I+GFCK G + +   L  +M   G +P+ +  ++++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 431 NGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
            GL       DA     Q +     PN   FNT+++  C+       ++L   M +    
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCS 502

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PD+I+++ +I G+   G    A+ L   M+ +G++P+ I YS+I   L K   I+  + M
Sbjct: 503 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQM 562

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           F  ++   +  D  +YN +++ L K    D A++    +   G  P+  TY  +I G  S
Sbjct: 563 FDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLAS 622



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 195/405 (48%), Gaps = 7/405 (1%)

Query: 207 RGFVPNIVTCNKILKRLCING-QIGNASSLF-DVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           RG   ++  CN +L  +C  G  +  A  L  D+    G  P+VV+++ ++   C   + 
Sbjct: 182 RGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRW 241

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
            +   L   M+ +   P+++ ++ LI  L + G  +  +++L   +D G   D+ ++++V
Sbjct: 242 GRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATV 301

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D     G +  A +  DRM + G  PNV+ Y+ ++KGLC   R  +A  L  ++     
Sbjct: 302 LDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDC 361

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALR 439
               +T++ L+D FC++G +     L + M++ G  PD +  + +IN     GL+ +A+ 
Sbjct: 362 PLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVM 421

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                      PN   +  ++ G C  +R  D   L   M      P+ +T   +I  + 
Sbjct: 422 LLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLC 481

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G +  AI L  QML  G +PD+I+YS +I GL K       L +  +M   G++P+  
Sbjct: 482 KKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 541

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           IY+ + + L KE  ++  +++F  + D  +  D + YN +I   C
Sbjct: 542 IYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLC 586



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 228/508 (44%), Gaps = 66/508 (12%)

Query: 86  VFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           V + +  Q G      RL RD    FGCD                               
Sbjct: 194 VLNAVCDQGGSVDEALRLLRDLPTSFGCD------------------------------- 222

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVI 205
            PD+V          N+V            KG C+ +       R G +++   +  +++
Sbjct: 223 -PDVVS--------YNAV-----------LKGLCMAK-------RWGRVQD---LMEEMV 252

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           + G  PN+VT N ++  LC NG       +   ++  G  P++  ++T+++  CKE  LE
Sbjct: 253 RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLE 312

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
            A ++ + M    L P+++ Y+ ++ GL  A R ++  ELL    D    LD V F+ ++
Sbjct: 313 VAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILV 372

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           D +   G V R ++  ++ML  G +P+VI+Y+ +I G C++G + EA  L   +      
Sbjct: 373 DFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCR 432

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRF 440
           P+ ++Y+ ++ G C + +  D   L   MI++G  P+ V  + +IN     GL+  A+  
Sbjct: 433 PNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIEL 492

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             Q +     P+L  ++T++DG  +  +  + ++L  +M    + P+ I ++ +   ++ 
Sbjct: 493 LKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSK 552

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
           +G ++  I +F  +    +  D + Y+A+I  L K       +     M  +G  P+ + 
Sbjct: 553 EGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNEST 612

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRG 588
           Y +L+  L  E  +  A ++  +L  +G
Sbjct: 613 YTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 121/299 (40%), Gaps = 45/299 (15%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK---SGKLRDG 407
           PN  +Y  +++ LC +GR+ +A  +  ++  R   P    Y  +++  C     G  R  
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN------GLMGDALRFFFQ-SVRMTLIPNLFIFNTLM 460
             +  ++  RG   D   C+L++N      G + +ALR            P++  +N ++
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
            G C  KR      L   M      P+V+T   LI  +   G       +  QM+  G T
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL--------------- 565
           PD+  Y+ ++ G+ K  ++ V   +   M   G+ P++  YN +L               
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEEL 352

Query: 566 --NMLIKECNLD------------------AALKLFGQLTDRGLEPDIITYNTIICGYC 604
              M   +C LD                    ++L  Q+ + G  PD+ITY T+I G+C
Sbjct: 353 LAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFC 411



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 130/301 (43%), Gaps = 45/301 (14%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIF 135
           DV  ++      Q G  Y    L    L + GC      Y+ +I  + + G IDE+V + 
Sbjct: 365 DVTFNILVDFFCQNGLVYRVIELLEQML-EHGCVPDVITYTTVINGFCKEGLIDEAVMLL 423

Query: 136 AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRK 191
             M+  G   +      ++  L  +        L   M  +G       +  ++N L +K
Sbjct: 424 KSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKK 483

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G++E A  + +Q++  G  P++++ + ++  L   G+   A  L +V++  G  PN + +
Sbjct: 484 GLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 543

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           S++ +A  KE ++ +  Q+++ + ++ +  D ++Y+ +I  L K                
Sbjct: 544 SSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKR--------------- 588

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
                               G   RA++    M++ G +PN  +Y+ILI+GL  +G + E
Sbjct: 589 --------------------GGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKE 628

Query: 372 A 372
           A
Sbjct: 629 A 629


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 235/511 (45%), Gaps = 49/511 (9%)

Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYK------LCRAMRGKGFC----VYEFLMNGLLRKG 192
           I+ + ++   LM   +++N V  Y K      L + M  KG C     Y  L++   R+G
Sbjct: 182 IWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRG 241

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            ++NA     ++ +      +   N ++   C  G    A   FD ++  G  P VVT++
Sbjct: 242 EMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYT 301

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           +LI+ +C E +  KAF++YN M    + P+   ++ +I GL +A  + E   L     +R
Sbjct: 302 SLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKER 361

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            +    V ++ +++ +   G++  A    D M+  GF+P+  +Y  LI GLC  GR+ EA
Sbjct: 362 KIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEA 421

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
                 +     + + + YS+L+ G+CK G+ +D  S    M++RG+  D V  ++LI+G
Sbjct: 422 KEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDG 481

Query: 433 LMGDA-LRFFFQSVR----MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
              +   R  F  ++      L P+  I+  ++D   +     +   L+ +M      P+
Sbjct: 482 TAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPN 541

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI--SVGLHM 545
           V+T+T LI G+   G +  A LL  + L   +TP+ ITY   +  L +G N+  +V LH 
Sbjct: 542 VVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHH 601

Query: 546 FKL--------------------------------MERNGVAPDIAIYNVLLNMLIKECN 573
             L                                M  N + PD   Y+ ++    K  N
Sbjct: 602 AMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSN 661

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           L  A+KL+  + D+GL+PD + Y+ ++ G C
Sbjct: 662 LQEAIKLWHTMLDKGLKPDTLAYSFLVHGCC 692



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 200/422 (47%), Gaps = 14/422 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  L++GL +   I  A  +   ++Q+G   N+VT           G+   A  LF  +
Sbjct: 168 VYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVT---------YYGKFNEAELLFKEM 218

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G   N +T+S LI++FC+  +++ A    + M +  +   +  Y+ LI+G  K G  
Sbjct: 219 GEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNA 278

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                     +D+GL   VV ++S++  Y   G+  +A + Y+ M   G  PN  +++ +
Sbjct: 279 SAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAI 338

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+   + EA  LFG++  R++ PS +TY+ +I+G C+SG + + F L D M+ +G 
Sbjct: 339 ISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGF 398

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD      LI+GL     + +A  F     +     N   ++ L+ G C+  R  D V 
Sbjct: 399 VPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVS 458

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
              +M    +  D++ + +LI G A +    +   L  +M   GL PD + Y+ +I    
Sbjct: 459 ACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHS 518

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  N+     ++ +M   G  P++  Y  L+N L K   +D A  L  +     + P+ I
Sbjct: 519 KAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHI 578

Query: 595 TY 596
           TY
Sbjct: 579 TY 580



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 233/522 (44%), Gaps = 20/522 (3%)

Query: 90  MVIQFGKTYNFFRLFRDSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
           +V  +GK +N   L    +G+ G       YS LI+++ R G++D ++     M+   I 
Sbjct: 201 VVTYYGK-FNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIE 259

Query: 145 LSPDLVQRLMS--CLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAF 198
            +      L++  C + + S  +YY     M  KG       Y  L++G   +G    AF
Sbjct: 260 FTVYPYNSLINGYCKLGNASAAKYY--FDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
            ++ ++  +G  PN  T   I+  LC    +  A  LF  +      P+ VT++ +I   
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGH 377

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C+   + +AF L + M+    VPD   Y  LI GL   GR+ E  E +        KL+ 
Sbjct: 378 CRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNN 437

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           + +S+++  Y   G    AV     M+  G   +++ Y+ILI G  ++       GL  +
Sbjct: 438 MCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKE 497

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----- 433
           +    L P  + Y+++ID   K+G L++ F L+D M+  G  P+ V  + LINGL     
Sbjct: 498 MHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGL 557

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           M  A     +++   + PN   +   +D   R       V+L   M +       +++ +
Sbjct: 558 MDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-LKGFLATTVSYNI 616

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LIRG    G +  A  L   M    + PD ITYS II+   K  N+   + ++  M   G
Sbjct: 617 LIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKG 676

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           + PD   Y+ L++       L+ A +L  ++  RG+  + +T
Sbjct: 677 LKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 191/432 (44%), Gaps = 49/432 (11%)

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
            +P + T + +L  L    +  +   LFD ++    +P++  +S ++ + C+     KA 
Sbjct: 92  LMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAK 151

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           ++ + M        +++Y++LI GL K+ R+ E  E+    + +GL+ +VV +       
Sbjct: 152 EMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY------- 204

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
              G    A   +  M   G   N I+YSILI   C++G +  A G   ++    +E ++
Sbjct: 205 --YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTV 262

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQ 443
             Y+SLI+G+CK G        +D MI +GL P  V  + LI+G   +     A + + +
Sbjct: 263 YPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNE 322

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                + PN + F  ++ G CR     + ++LF  M    I P  +T+ V+I G    G+
Sbjct: 323 MTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGN 382

Query: 504 LSSAILLFFQMLKRGLTPDVIT-----------------------------------YSA 528
           +S A  L  +M+ +G  PD  T                                   YSA
Sbjct: 383 ISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSA 442

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++HG  K       +   ++M   GVA D+  Y +L++   +E +  A   L  ++ + G
Sbjct: 443 LVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG 502

Query: 589 LEPDIITYNTII 600
           L PD + Y  +I
Sbjct: 503 LRPDAVIYTNMI 514



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 173/339 (51%), Gaps = 14/339 (4%)

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
           LM + +L+P++   S L++GL +  R  +   L    +   ++ D+ ++S+V+ +   + 
Sbjct: 86  LMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELK 145

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           D  +A +    M       +++ Y++LI GLC+  R+ EA  +   ++ + LE +++TY 
Sbjct: 146 DFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY 205

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRM 447
                    GK  +   L+  M ++GL  + +  S+LI+     G M +A+ F  +  + 
Sbjct: 206 ---------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKA 256

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
           ++   ++ +N+L++G C+L  A+     F  M    + P V+T+T LI G  ++G    A
Sbjct: 257 SIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKA 316

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             ++ +M  +G++P+  T++AII GL +   ++  + +F  M+   + P    YNV++  
Sbjct: 317 FKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEG 376

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             +  N+  A  L  ++  +G  PD  TY  +I G CS+
Sbjct: 377 HCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSV 415



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 192/437 (43%), Gaps = 35/437 (8%)

Query: 9   LTVWRSINKCYCSESKTHISDLQFNQANA------------ILANLIKTNNPTPAIQFFK 56
           +  + S+   YC+E + H +   +N+  A            I++ L + N    AI+ F 
Sbjct: 297 VVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFG 356

Query: 57  WTHNCVSSPNIAQLIHVLLQSDMRD----VASHVFDKMVIQFGKTYNFFRLFRDSLGDFG 112
                   P+     +V+++   R      A H+ D+MV   GK +       D+     
Sbjct: 357 EMKERKIMPSEVTY-NVMIEGHCRSGNISEAFHLLDEMV---GKGF-----VPDTY---- 403

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
             Y  LI     +G++ E+ E    +      L+      L+               CR 
Sbjct: 404 -TYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRV 462

Query: 173 MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +G  +    Y  L++G  R+      F + +++   G  P+ V    ++ R    G 
Sbjct: 463 MVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGN 522

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L+D+++  G  PNVVT++ LIN  CK   ++KA  L    +  D+ P+ I Y  
Sbjct: 523 LKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGC 582

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            +D L + G +++  +L   A+ +G     V ++ ++  +  +G +  A +    M +  
Sbjct: 583 FLDHLTRGGNMEKAVQLH-HAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDND 641

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP+ I+YS +I   C++  L EA  L+  +L + L+P  L YS L+ G C +G+L   F
Sbjct: 642 ILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAF 701

Query: 409 SLYDNMIKRGLKPDAVV 425
            L D MI+RG++ + V 
Sbjct: 702 ELRDEMIRRGMRSNHVT 718



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 48/309 (15%)

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGL----CQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           R  Q++    N  F+   +  S + K L        RL++ C L          P + T 
Sbjct: 49  RGKQSWRIAFNDPFISRNLKPSHVDKVLMMLSLNDSRLMKDCNLM---------PEVRTL 99

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIP 451
           S+L++G  +  +  D   L+D+++   ++PD  + S ++  L    L+ F ++  M    
Sbjct: 100 SALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLC--ELKDFNKAKEMIHWM 157

Query: 452 -------NLFIFNTLMDGCCRLKRATDTVK--------------------------LFML 478
                  ++ ++N L+ G C+ +R  + ++                          LF  
Sbjct: 158 EFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKE 217

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           MG   +  + IT+++LI     +G + +AI    +M K  +   V  Y+++I+G  K  N
Sbjct: 218 MGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGN 277

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
            S   + F  M   G+ P +  Y  L++    E     A K++ ++T +G+ P+  T+  
Sbjct: 278 ASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTA 337

Query: 599 IICGYCSLN 607
           II G C  N
Sbjct: 338 IISGLCRAN 346



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 15/207 (7%)

Query: 419 LKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           L P+    S L+NGL+      D L  F   V   + P+++I++ ++   C LK      
Sbjct: 92  LMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAK 151

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           ++   M     K  ++ + VLI G+     +  A+ +   ++++GL  +V+TY    +G 
Sbjct: 152 EMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY----YGK 207

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           F    +     +FK M   G+  +   Y++L++   +   +D A+    ++T   +E  +
Sbjct: 208 FNEAEL-----LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTV 262

Query: 594 ITYNTIICGYCSL-NSCLIDGYFKSQI 619
             YN++I GYC L N+     YF   I
Sbjct: 263 YPYNSLINGYCKLGNASAAKYYFDEMI 289


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 215/456 (47%), Gaps = 36/456 (7%)

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
            L R G  + A  + R + + G VP+ V    ++  LC  G +  A++L + +LL+G   
Sbjct: 184 ALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 243

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK----------- 295
           +V TF  ++   C   ++ +A +L + MM    +P ++ Y  L+ GL +           
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303

Query: 296 --------------------AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
                                G+L E  EL  T   +G + D   +S +M     +G +G
Sbjct: 304 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIG 363

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            AV+    M   GF PNV++Y+I++   C+ G   +   L  ++  + L  +   Y+ +I
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLI 450
              CK G++ +   L   M  +G  PD      ++  L  N  M +A   F   +   ++
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
            N   +NT++    R  R  D V+L   M ++    DV+++  LI+ +   G++  +++L
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
             +M ++G+ P+ ++Y+ +I  L K + +   L + K M   G+APDI  YN L+N L K
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              + AAL L  +L +  + PDIITYN +I  +C +
Sbjct: 604 MGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 639



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 250/536 (46%), Gaps = 41/536 (7%)

Query: 83  ASHVFDKMVIQFG-----KTYN-----------------FFR--LFRDSLGDFGCDYSFL 118
           A H+ D++  +FG     ++YN                  +R  + RD +      +   
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
                R+G+ DE++ +   M+  G      L Q ++  L D   V +   L   M   G 
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 179 CV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 ++ ++ G+   G +  A  +  +++ +G +P ++T   +L+ LC   Q   A +
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +    P+ NVV F+T+I     E KL +A +LY  M      PD   YSIL+ GL 
Sbjct: 302 MLGRV----PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV--GIGDVGRAVQTYDRMLNGGFLPN 352
           K GR+     LL     +G   +VV ++ V+ ++   G+ D  RA+   + M   G   N
Sbjct: 358 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL--LEEMSAKGLTLN 415

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
              Y+ +I  LC+ GR+ EA GL  ++  +   P + +Y+++I   C + ++ +   +++
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475

Query: 413 NMIKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           N+++ G+  + +     + +LL +G   DA+R   + +      ++  +N L+   C+  
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
               ++ L   M    IKP+ +++ +LI  +  +  +  A+ L  QML +GL PD++TY+
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            +I+GL K   +   L++ + +    V PDI  YN+L++   K   LD A  L  +
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 196/415 (47%), Gaps = 11/415 (2%)

Query: 197 AFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-KPNVVTFSTL 254
           A H+  Q+ +R G  P+  + N +L  L       +A +L+  ++      P   TF   
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
             A C+  + ++A  L   M     VPD ++Y  +I  L   G + E   LL   L  G 
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             DV  F  V+    G+G V  A +  DRM+  G +P V++Y  L++GLC+  +  EA  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           + G+V     E +++ ++++I G    GKL +   LY+ M  +G +PDA   S+L++GL 
Sbjct: 302 MLGRV----PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               +G A+R   +  +    PN+  +  ++   C+     DT  L   M    +  +  
Sbjct: 358 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
            +  +I  +   G +  A+ L  +M  +G  PD+ +Y+ II+ L   + +    HMF+ +
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              GV  +   YN +++ L+++     A++L  ++   G   D+++YN +I   C
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 532



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 138/270 (51%), Gaps = 4/270 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++ ++ + G  D++  +   MS  G+ L+      ++  L     + +   L + MR
Sbjct: 384 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 443

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G     C Y  ++  L     +E A HM   +++ G V N +T N I+  L  +G+  
Sbjct: 444 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 503

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  L   ++L G   +VV+++ LI A CK+  ++++  L   M E  + P+ + Y+ILI
Sbjct: 504 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 563

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K  R+++  EL    L++GL  D+V ++++++    +G +  A+   +++ N    
Sbjct: 564 SELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVH 623

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           P++I+Y+ILI   C+   L +A  L  + +
Sbjct: 624 PDIITYNILISWHCKVRLLDDAAMLLNRAM 653



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/126 (20%), Positives = 58/126 (46%), Gaps = 1/126 (0%)

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG-LTPDVITYSAIIHGLFKGKNIS 540
           + ++P   ++ V++  +A     + A+ L+ +M+ R  + P   T+      L +     
Sbjct: 133 FGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRAD 192

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             L + + M R+G  PD  +Y  +++ L  +  +  A  L  ++   G   D+ T++ ++
Sbjct: 193 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 252

Query: 601 CGYCSL 606
            G C L
Sbjct: 253 RGMCGL 258


>gi|17047023|gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa]
 gi|31429883|gb|AAP51872.1| hypothetical protein LOC_Os10g02650 [Oryza sativa Japonica Group]
          Length = 949

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 229/476 (48%), Gaps = 16/476 (3%)

Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIEN 196
           G+YL  +L   L+        +     + R M+G          Y  ++ GL   G +++
Sbjct: 182 GMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDH 241

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
              M+ ++I RG  P+  T N +++  C +  +G A  ++ V++  G  P++  ++ L+ 
Sbjct: 242 GLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYTILMA 301

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA---LDRG 313
           + CK+ KL +A  L++ M+E  L PD +++ I I   F  G +       L A   LD G
Sbjct: 302 SLCKDGKLGEAENLFDKMLESGLFPDHVMF-ISIARFFPKGWVVLFVRKALKAVAKLDCG 360

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
            KL  +  SS+      +     A    D ++    LP  I  +++I  +C +GRL  + 
Sbjct: 361 AKL--LELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSY 418

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
            L G+++    EPS+LTY+ +I   C+  ++ D  +L   M  RG++PD    S+++   
Sbjct: 419 YLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAY 478

Query: 432 ---GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
              G +  AL  F +  +  + P++ ++++++   CR++R  +       M    + PD 
Sbjct: 479 CKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDE 538

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           I +T LI G +      +   +F +MLKRGL P    Y ++I+GL KG  I   L   + 
Sbjct: 539 IIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLER 598

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M   G+AP   IY +L+N   ++ ++   L L   +    + PD+ITY  ++ G C
Sbjct: 599 MLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGIC 654



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/470 (23%), Positives = 212/470 (45%), Gaps = 49/470 (10%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V   ++  +  +G ++ ++++  +++  G  P+++T N ++K LC   ++ +A +L  ++
Sbjct: 400 VLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIM 459

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +P++ T S ++ A+CK  ++E A  L+  M +  + P + +Y  +I  L +  RL
Sbjct: 460 QSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRL 519

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE    L   +  GL  D ++++S+++ Y          + +D ML  G  P   +Y  L
Sbjct: 520 KEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSL 579

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GL +  ++ +A G   ++L   + P  + Y+ LI+ F + G +R G  L   M+K  +
Sbjct: 580 INGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNV 639

Query: 420 KPDAVVCSLLINGL--------MGDALRFFFQSVRMTL---------------------- 449
            PD +    L+ G+        M  +L    +  R  L                      
Sbjct: 640 APDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKDNQICT 699

Query: 450 -------------------IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
                              +P+L I+N +++G CR  +  D   L  +M    I P+ +T
Sbjct: 700 EEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVT 759

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +T+L+      G ++ AI LF  +   G   D ITY+  I GL     +   L    +M 
Sbjct: 760 YTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMH 819

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           + G  P  A Y+ L+ +L+ E  +D  L+LF  +  +G  P    Y +++
Sbjct: 820 KRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLL 869



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 200/437 (45%), Gaps = 22/437 (5%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +  L+ GL  +G ++ A  +   +++ G  P +     +    C   +  +AS +  ++L
Sbjct: 120 FALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCKARRSLDASDMCQLML 179

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP-DLIIYSILIDGLFKAGRL 299
           + G   +    + LI  FC+E +LE A  ++  M   + V  D   Y+ +I GLF+ GR+
Sbjct: 180 IKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRV 239

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
             G ++    +DRG++ D   ++ ++  Y     VG A+  Y  M+  G  P++  Y+IL
Sbjct: 240 DHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYTIL 299

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS-------------GKLRD 406
           +  LC+ G+L EA  LF ++L   L P  + + S+   F K               KL  
Sbjct: 300 MASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKLDC 359

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           G  L +      L   A  CS +   L  +A     + V   ++P   + N ++   C  
Sbjct: 360 GAKLLE------LSSLAGGCSNM--SLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSE 411

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            R   +  L   +  Y  +P V+T+ ++I+ +  Q  +  A  L   M  RG+ PD+ T 
Sbjct: 412 GRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTN 471

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           S ++    K   I   LH+F  M ++G+ P IA+Y+ ++  L +   L  A     Q+  
Sbjct: 472 SIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIR 531

Query: 587 RGLEPDIITYNTIICGY 603
            GL PD I Y ++I GY
Sbjct: 532 EGLAPDEIIYTSLINGY 548



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/521 (23%), Positives = 233/521 (44%), Gaps = 39/521 (7%)

Query: 110 DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY-- 167
           D  C Y+ L+ +  + GK+ E+  +F  M + G++  PD V  +        S+ +++  
Sbjct: 292 DLRC-YTILMASLCKDGKLGEAENLFDKMLESGLF--PDHVMFI--------SIARFFPK 340

Query: 168 --------KLCRAMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
                   K  +A+     G        L  G     + + A H+  +++    +P  + 
Sbjct: 341 GWVVLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIV 400

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N ++  +C  G++  +  L   L+  G +P+V+T++ +I   C++ +++ A  L  +M 
Sbjct: 401 LNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQ 460

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
              + PD+   SI++    K G ++    L       G++  + V+ S++     +  + 
Sbjct: 461 SRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLK 520

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A  T  +M+  G  P+ I Y+ LI G     +    C +F ++L R L+P    Y SLI
Sbjct: 521 EAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLI 580

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRMTLI 450
           +G  K  K+R      + M++ G+ P  V+ ++LIN     GD    L      ++  + 
Sbjct: 581 NGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVA 640

Query: 451 PNLFIFNTLMDGCCRL-----KRATDTVKL----FMLMGMYNIKPDVITHTVLIRGIASQ 501
           P+L  +  L+ G CR       R +   KL    +ML  M     D          I ++
Sbjct: 641 PDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKDNQICTE 700

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
             +  A  +   + + G+ PD+  Y+ +I+GL +   +     +  +M++ G+ P+   Y
Sbjct: 701 EMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTY 760

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            +L+N  I+  +++ A++LF  L   G   D ITYNT I G
Sbjct: 761 TILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKG 801



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 189/391 (48%), Gaps = 8/391 (2%)

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC  G +  A  LFD +L  G  P V  + +L  A+CK  +   A  +  LM+   +  D
Sbjct: 127 LCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCKARRSLDASDMCQLMLIKGMYLD 186

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
             + + LI    + GRL+   ++      D  ++LD   +++++      G V   +Q Y
Sbjct: 187 RELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDHGLQMY 246

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCK 400
             M++ G  P+  +Y+++I+  C+   +  A  ++ +V+IR  + P L  Y+ L+   CK
Sbjct: 247 HEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIY-KVMIRTGVAPDLRCYTILMASLCK 305

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAV----VCSLLINGLMGDALRFFFQSV-RMTLIPNLFI 455
            GKL +  +L+D M++ GL PD V    +      G +   +R   ++V ++     L  
Sbjct: 306 DGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKLDCGAKLLE 365

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
            ++L  GC  +    +   L   +   N+ P  I   ++I  + S+G L  +  L  +++
Sbjct: 366 LSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLV 425

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             G  P V+TY+ +I  L +   +     +  +M+  GV PD++  ++++    K   ++
Sbjct: 426 AYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIE 485

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +AL LFG++   G+EP I  Y++II   C +
Sbjct: 486 SALHLFGEMAKDGIEPSIAVYDSIIVCLCRM 516



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/409 (21%), Positives = 167/409 (40%), Gaps = 41/409 (10%)

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L +   P+      L+    +   +  A   ++ +++    P     + L+  +  A   
Sbjct: 39  LALADAPDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMS 98

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  ++L+ ++     L V  F+ ++      G V +A   +D ML  G  P V  Y  L
Sbjct: 99  TEAMDVLVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSL 158

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI-KRG 418
               C+  R ++A  +   +LI+ +       ++LI  FC+ G+L     ++  M     
Sbjct: 159 AFAYCKARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEH 218

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           ++ DA   + +I GL     +   L+ + + +   + P+   +N ++   C+ K     +
Sbjct: 219 VQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAM 278

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            ++ +M    + PD+  +T+L+  +   G L  A  LF +ML+ GL PD + + +I    
Sbjct: 279 DIYKVMIRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFF 338

Query: 534 FKG-------------KNISVGLHMFKLMERNG------------------VAPDIAIYN 562
            KG               +  G  + +L    G                  V  ++   N
Sbjct: 339 PKGWVVLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVN 398

Query: 563 VLLNMLI----KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           ++LN++I     E  LD +  L G+L   G EP ++TYN +I   C  N
Sbjct: 399 IVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQN 447



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 17/297 (5%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR---LMSCLV 158
           R+  + +      Y+ LI  + R G +   +++   M  M   ++PDL+     +     
Sbjct: 598 RMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLM--MKTNVAPDLITYGALVTGICR 655

Query: 159 DSNSVGQYYKLCRAMRGKGFCVYEFL------MNGLLRKGVI--ENAFHMHRQVIQ---- 206
           +    G    L + ++   + ++  L       NG  +   I  E    + + +IQ    
Sbjct: 656 NIARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKDNQICTEEMIQVAQGIIQDLEE 715

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G VP++   N ++  LC   ++ +A SL  V+   G  PN VT++ L+N   +   +  
Sbjct: 716 NGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINH 775

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A QL+N +     V D I Y+  I GL  AGR+KE    LL    RG       +  +M+
Sbjct: 776 AIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLME 835

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
             +    +   +Q ++ ML  G+ P   +Y+ L+  L + GR  EA  +F  +L +R
Sbjct: 836 LLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLKKR 892



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/364 (19%), Positives = 140/364 (38%), Gaps = 48/364 (13%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
           ++ R+ L      Y+ LI  Y    +      IF  M   G+   P     L++ LV  N
Sbjct: 528 QMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGN 587

Query: 162 SVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT-- 215
            + +       M  +G      +Y  L+N   RKG +     +   +++    P+++T  
Sbjct: 588 KIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYG 647

Query: 216 ------CNKILKR------------------------------------LCINGQIGNAS 233
                 C  I +R                                    +C    I  A 
Sbjct: 648 ALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKDNQICTEEMIQVAQ 707

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            +   L   G  P++  ++ +IN  C+  K++ A+ L ++M +  ++P+ + Y+IL++  
Sbjct: 708 GIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQ 767

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G +    +L  +    G   D + +++ +      G +  A+     M   GF+P+ 
Sbjct: 768 IRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSK 827

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            SY  L++ L  +  +     LF  +L +   P    Y+SL+    K G+  +   ++  
Sbjct: 828 ASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTM 887

Query: 414 MIKR 417
           M+K+
Sbjct: 888 MLKK 891


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 211/436 (48%), Gaps = 16/436 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L++    KG + +A      +   G  P+ VT N +L   C  G +G A +L   +
Sbjct: 206 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 265

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG-- 297
              G  P   T++TL++A+ +   +++A ++   M      PDL  Y++L  GL +AG  
Sbjct: 266 KKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKV 325

Query: 298 ----RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
               RLK+  E L T L      DVV ++++ DA         A++  + M   G    +
Sbjct: 326 DEAFRLKDEMERLGTLLP-----DVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATL 380

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           ++++I+IKGLC+ G L  A G   ++    L P ++TY++LI   CK+G +   ++L D 
Sbjct: 381 VTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDE 440

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M++RGLK D    + ++  L       +A        +   +P+   + T+M    +   
Sbjct: 441 MVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
           +   ++L+  M    + P + T+  LI+G++  G L  AI    +++++GL PD  TY+ 
Sbjct: 501 SEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNI 560

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           IIH   K  ++         M  N   PD+   N L+N L     LD ALKLF    ++G
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKG 620

Query: 589 LEPDIITYNTIICGYC 604
            + D+ITYNT+I   C
Sbjct: 621 KKVDVITYNTLIQTMC 636



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 217/483 (44%), Gaps = 44/483 (9%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVD 159
           R+ +D +      Y+ L+  Y R+G I ++ ++   M+  G    PDL     L + L  
Sbjct: 264 RMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANG--FEPDLWTYNVLAAGLCQ 321

Query: 160 SNSVGQYYKLCRAMRGKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           +  V + ++L   M   G        Y  L +   +     +A  +  ++ ++G    +V
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++K LC +G++  A    + +   G  P+V+T++TLI+A CK   + KA+ L + M
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +   L  D    + ++  L K  R +E   LL +   RG   D V + +VM AY    + 
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNS 501

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A++ +D M+     P++ +Y+ LIKGL + GRL EA     +++ + L P   TY+ +
Sbjct: 502 EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
           I  +CK G L + F  ++ M++   KPD V C                            
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTC---------------------------- 593

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
             NTLM+G C   +    +KLF        K DVIT+  LI+ +   G + +A+  F  M
Sbjct: 594 --NTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADM 651

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
             RGL PD  TY+ ++  L +        +M   +  +G      +     + L+K  ++
Sbjct: 652 EARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGT-----LSQSFSSPLLKPSSV 706

Query: 575 DAA 577
           D A
Sbjct: 707 DEA 709



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 227/486 (46%), Gaps = 14/486 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ L+  +   G + +++   + M   G  LSPD V    L++       +G+   L   
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFG--LSPDAVTYNTLLNAHCRKGMLGEARALLAR 264

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G       Y  L++   R G I+ A  +   +   GF P++ T N +   LC  G+
Sbjct: 265 MKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGK 324

Query: 229 IGNASSLFDVLLLVGPK-PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +  A  L D +  +G   P+VVT++TL +A  K      A +L   M E  +   L+ ++
Sbjct: 325 VDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHN 384

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           I+I GL K G L+     L    D GL  DV+ +++++ A+   G++ +A    D M+  
Sbjct: 385 IVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRR 444

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G   +  + + ++  LC++ R  EA GL      R   P  ++Y +++  + K       
Sbjct: 445 GLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPA 504

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL--MG---DALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+D MI++ L P     + LI GL  MG   +A+    + +   L+P+   +N ++  
Sbjct: 505 LRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHA 564

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+     +  +    M   + KPDV+T   L+ G+   G L  A+ LF   +++G   D
Sbjct: 565 YCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVD 624

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           VITY+ +I  + K  ++   LH F  ME  G+ PD   YNV+L+ L +    + A  +  
Sbjct: 625 VITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLH 684

Query: 583 QLTDRG 588
           +L + G
Sbjct: 685 KLAESG 690



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 118/261 (45%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+ GL R G ++ A     +++++G VP+  T N I+   C  G + NA    + +
Sbjct: 522 TYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKM 581

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +    KP+VVT +TL+N  C   KL+KA +L+   +E     D+I Y+ LI  + K G +
Sbjct: 582 VENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDV 641

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                       RGL+ D   ++ V+ A    G    A     ++   G L    S  +L
Sbjct: 642 DTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLL 701

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
                 +    +      + +    + +   Y+ L++G C SG+ ++  ++ D M+++G+
Sbjct: 702 KPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGM 761

Query: 420 KPDAVVCSLLINGLMGDALRF 440
             D+     L+ GL+    R 
Sbjct: 762 SVDSSTYITLMEGLVKRQKRL 782



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 2/125 (1%)

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILL--FFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
           ++P +     ++  +A   S S    L  F  ++   L P+  T++ ++H       ++ 
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L     M+  G++PD   YN LLN   ++  L  A  L  ++   G+ P   TYNT++ 
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282

Query: 602 GYCSL 606
            Y  L
Sbjct: 283 AYARL 287


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 236/490 (48%), Gaps = 28/490 (5%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           L+   L+   +D AS +  +M  Q G       L  D        Y+ +I    R G ++
Sbjct: 249 LLDSFLKEGRKDEASMLLKEMETQGGGC-----LLND------VTYNVVISFLAREGHLE 297

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLM 185
            + ++   M  +    S      L++ L++   V +   L   M  +G       Y  ++
Sbjct: 298 NAAKLVDSMR-LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAII 356

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           +GLL+   +E A     ++   G +P+++T N +L   C  G +  A  L   L   G  
Sbjct: 357 HGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLA 416

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P V+T++TLI+ +C+   LE+A +L   M+E    PD+  Y+IL++G  K   L    E 
Sbjct: 417 PTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREF 476

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
               L +GL+ D   +++ + A + +GD  +A Q  + M+  G  P+ ++Y+++I GLC+
Sbjct: 477 FDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCK 536

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G L +A  L  +++   L+P  +TY+ LI   C+ G L +   L + M+  GL+P  V 
Sbjct: 537 TGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVT 596

Query: 426 CSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            ++LI+     G +  A  +F + + + + PN   +N L+   CR  R       F  M 
Sbjct: 597 YTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEML 656

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              + P+  T+T+LI G   +G+ + AI L+F+M + G+ PD  T++A+  G  KG    
Sbjct: 657 ERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKG---- 712

Query: 541 VGLHMFKLME 550
              HM+  +E
Sbjct: 713 ---HMYHAIE 719



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 236/495 (47%), Gaps = 37/495 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMG--IYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++++++ G+ DE+  +   M   G    L+      ++S L     +    KL  +
Sbjct: 246 YNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDS 305

Query: 173 MR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR       F  Y  L+  LL +G ++    +  ++   G +P +VT N I+  L  + Q
Sbjct: 306 MRLSKKASSF-TYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQ 364

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A   F  +  +G  P+++T+++++N +CK   L++A  L   +    L P ++ Y+ 
Sbjct: 365 VEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNT 424

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDG  + G L+E   L    +++G   DV  ++ +M+    + ++  A + +D ML+ G
Sbjct: 425 LIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKG 484

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+  +Y+  I      G   +A  L   ++++ + P  +TY+ +IDG CK+G L+D  
Sbjct: 485 LQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAK 544

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L   M+  GL+PD +  + LI+                                C    
Sbjct: 545 DLKMKMVSDGLQPDCITYTCLIHAH------------------------------CERGL 574

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            ++  KL   M    ++P V+T+T+LI     +G+L SA   F +ML  G+ P+ ITY+ 
Sbjct: 575 LSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNV 634

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +IH L +     +  H F  M   G+AP+   Y +L++   +E N   A++L+ ++   G
Sbjct: 635 LIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNG 694

Query: 589 LEPDIITYNTIICGY 603
           + PD  T+N +  G+
Sbjct: 695 IPPDYCTHNALFKGF 709



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 212/422 (50%), Gaps = 14/422 (3%)

Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP--NVVTFSTLINA 257
           ++R+++Q    P IVT N +L      G+   AS L   +   G     N VT++ +I+ 
Sbjct: 230 VYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISF 289

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
             +E  LE A +L +  M +        Y+ LI  L + G +++   L +   + G+   
Sbjct: 290 LAREGHLENAAKLVD-SMRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPT 348

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           +V +++++   +    V  A   +  M   G LP++I+Y+ ++ G C+ G L EA  L G
Sbjct: 349 LVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLG 408

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
            +    L P++LTY++LIDG+C+ G L +   L + M+++G  PD    ++L+NG     
Sbjct: 409 DLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVR 468

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML---MGMYNIKPDVI 489
            +  A  FF + +   L P+ F +NT +  C  L    DT K F L   M +  I PD +
Sbjct: 469 NLPMAREFFDEMLSKGLQPDCFAYNTRI--CAELILG-DTHKAFQLREVMMLKGIYPDTV 525

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+ V+I G+   G+L  A  L  +M+  GL PD ITY+ +IH   +   +S    +   M
Sbjct: 526 TYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGM 585

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
             +G+ P +  Y +L++   +  NL +A   F ++ D G+EP+ ITYN +I   C     
Sbjct: 586 VSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRT 645

Query: 610 LI 611
           L+
Sbjct: 646 LL 647



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 214/435 (49%), Gaps = 14/435 (3%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRG--FVPNIVTCNKILKRLCINGQIGNASSLFD 237
            Y  L++  L++G  + A  + +++  +G   + N VT N ++  L   G + NA+ L D
Sbjct: 245 TYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVD 304

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            + L   K +  T++ LI A  +   ++K   L   M    ++P L+ Y+ +I GL K+ 
Sbjct: 305 SMRL-SKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSE 363

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           +++            GL  D++ ++S+++ Y   G++  A+     +   G  P V++Y+
Sbjct: 364 QVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYN 423

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G C+ G L EA  L  +++ +   P + TY+ L++G  K   L      +D M+ +
Sbjct: 424 TLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSK 483

Query: 418 GLKPDAV-----VCSLLINGLMGDALRFF-FQSVRM--TLIPNLFIFNTLMDGCCRLKRA 469
           GL+PD       +C+ LI   +GD  + F  + V M   + P+   +N ++DG C+    
Sbjct: 484 GLQPDCFAYNTRICAELI---LGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNL 540

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            D   L M M    ++PD IT+T LI     +G LS A  L   M+  GL P V+TY+ +
Sbjct: 541 KDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTIL 600

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           IH   +  N+      F+ M   G+ P+   YNVL++ L +      A   F ++ +RGL
Sbjct: 601 IHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGL 660

Query: 590 EPDIITYNTIICGYC 604
            P+  TY  +I G C
Sbjct: 661 APNKYTYTLLIDGNC 675



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 116/259 (44%), Gaps = 29/259 (11%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V   + +++ L    R  +   ++ ++L   +EP+++TY++L+D F K G+  + 
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             L   M  +G                G  L             N   +N ++    R  
Sbjct: 263 SMLLKEMETQG----------------GGCLL------------NDVTYNVVISFLAREG 294

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
              +  KL   M + + K    T+  LI  +  +G +     L  +M   G+ P ++TY+
Sbjct: 295 HLENAAKLVDSMRL-SKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYN 353

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           AIIHGL K + +      F  M   G+ PD+  YN +LN   K  NL  AL L G L   
Sbjct: 354 AIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRA 413

Query: 588 GLEPDIITYNTIICGYCSL 606
           GL P ++TYNT+I GYC L
Sbjct: 414 GLAPTVLTYNTLIDGYCRL 432



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 38/164 (23%)

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F ++  + + PDV     ++R +           ++ +ML+  + P ++TY+ ++    K
Sbjct: 196 FRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLK 255

Query: 536 GKNISVGLHMFKLMERNG---VAPDIAIYNVLLNMLIKECNLDAALKLFG---------- 582
                    + K ME  G   +  D+  YNV+++ L +E +L+ A KL            
Sbjct: 256 EGRKDEASMLLKEMETQGGGCLLNDVT-YNVVISFLAREGHLENAAKLVDSMRLSKKASS 314

Query: 583 ------------------------QLTDRGLEPDIITYNTIICG 602
                                   ++ + G+ P ++TYN II G
Sbjct: 315 FTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHG 358


>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Brachypodium distachyon]
          Length = 795

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 220/432 (50%), Gaps = 6/432 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++GL + G ++ A  +  +V + G     VT N ++    + G       +   +
Sbjct: 275 TYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFM 334

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +P++VT++ LI   C+   +E+  ++ N +++  L  +++ YS+L++ LFK G +
Sbjct: 335 RYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLV 394

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML-NGGFLPNVISYSI 358
            E   LL      GL +D++ +S ++  Y  +G++ RA++  D M  +   +P  +++  
Sbjct: 395 HEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNHLS 454

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           ++ GLC++G LVEA      V ++     ++ Y+ +IDG+ K G + +   LYD ++  G
Sbjct: 455 ILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAG 514

Query: 419 LKPDAVVCSLLINGLM--GD--ALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTV 473
           + P  V C+ ++ G    GD  A   +F++++++ L+P +  + TLMD      +    +
Sbjct: 515 MFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTML 574

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +   M    IKP+ IT++V+I+G+  +     AI     M   G+  D +TY+ +I G 
Sbjct: 575 SILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGF 634

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            + ++I +  H+   M   G+ P    YN L+N+L  +  +  A  L   L +RG+E   
Sbjct: 635 CEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESLRERGIELRK 694

Query: 594 ITYNTIICGYCS 605
             Y T+I   C+
Sbjct: 695 FAYTTLIKAECA 706



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 230/505 (45%), Gaps = 45/505 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI    +IG +DE+V++F  +++ G+ L       L++         +  K+ + MR
Sbjct: 276 YSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFMR 335

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L+ G    G +E    +   ++ +G   NIVT + +L  L   G + 
Sbjct: 336 YQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVH 395

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM-MEMDLVPDLIIYSIL 289
            A +L   +  +G   +++ +S LI+ +CK  ++E+A ++ ++M     +VP  + +  +
Sbjct: 396 EAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNHLSI 455

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           + GL K G L E    L     +    DVV+++ V+D Y  IGD+  AV  YD+++  G 
Sbjct: 456 LVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGM 515

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P +++ + ++ G C+ G L  A   F  + I  L P+++TY++L+D   ++GK+    S
Sbjct: 516 FPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLS 575

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           +   M+++G+KP+A+  S++I GL       DA+ F        +  +   +NTL+ G C
Sbjct: 576 ILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFC 635

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVIT---------------------------------- 490
            ++       +   M    I P  +T                                  
Sbjct: 636 EVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESLRERGIELRKF 695

Query: 491 -HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
            +T LI+   ++G    AI LF ++L  G    V  +SA I+ L K K     +     M
Sbjct: 696 AYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKRKFAKEAVMFIPFM 755

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNL 574
              GV PD  +Y VL+  L K   L
Sbjct: 756 LSAGVFPDTQVYYVLVRALQKRKEL 780



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 181/412 (43%), Gaps = 39/412 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVG-----QYYKL 169
           YS LI  Y ++G+I+ ++E+   M      +   L    +S LV     G     ++Y  
Sbjct: 416 YSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNH--LSILVGLCKKGLLVEARWYLE 473

Query: 170 CRAMRGK--GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
             A++ +     +Y  +++G  + G I NA  ++ Q++  G  P IVTCN IL   C  G
Sbjct: 474 NVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCG 533

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            +  A S F  + +    P +VT++TL++A  +  K+     +   M+E  + P+ I YS
Sbjct: 534 DLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYS 593

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ++I GL K  R  +    L      G+  D V +++++  +  + D+  A   +DRM+  
Sbjct: 594 VVIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYC 653

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +P  ++Y+ LI  LC +G++++A  L   +  R +E     Y++LI   C  G   + 
Sbjct: 654 GIVPTPVTYNFLINVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIKAECAKGMPYEA 713

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            SL+  ++  G +      S  IN L                              C+ K
Sbjct: 714 ISLFGKLLDDGFETTVKDFSAAINRL------------------------------CKRK 743

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
            A + V     M    + PD   + VL+R +  +  L    LL    +K G+
Sbjct: 744 FAKEAVMFIPFMLSAGVFPDTQVYYVLVRALQKRKELFYLPLLHALAVKTGI 795


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 216/445 (48%), Gaps = 38/445 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ + + + + G++++  E++  M + G  L       L+SCL    +  + YKL   MR
Sbjct: 13  FNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMR 72

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K F      Y  ++N L +   +E A  +  + + R   P+ +T   I++RLC   +I 
Sbjct: 73  LKRFKRKAIAYSTIINWLCKLNRVEEARELIEK-MARYAPPDALTYGPIVERLCKTKRID 131

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A +  + +   G KP+   ++ +++  C+E K+E+A  L+  M++  + P+++ Y+ LI
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLI 191

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL KA R++   EL      +G     V +++++D +    D+  A   +D+M+    +
Sbjct: 192 NGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV 251

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV++Y+ LI GL + G++  A  +   ++ + + P++ TYS LIDGFCK  ++ +   L
Sbjct: 252 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 311

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            + M+ +G+ P  V  ++L+N L                              CR  +  
Sbjct: 312 LEQMVTQGIAPTVVTYNILLNSL------------------------------CRADKLE 341

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D  KLF  M      P V+T+  L+R +     L  A  L+ +M+ +G  PD ITY  + 
Sbjct: 342 DAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLA 401

Query: 531 HGLFKGKNISVG---LHMFKLMERN 552
            GL +   +      +   KL +RN
Sbjct: 402 WGLTRAGKVHEAQELMEKMKLTKRN 426



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 185/364 (50%), Gaps = 6/364 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P   TF+T+ + F K  +LE+  ++Y  M+E         Y ILI  L K G   E  +L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L T   +  K   + +S++++    +  V  A +  ++M      P+ ++Y  +++ LC+
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCK 126

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
             R+ +A     ++  R ++P    Y+ ++ G C+  K+ +   L++ M+K+ + P+ V 
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            + LINGL     +  A   F +      +P    +NTL+DG C+ K       +F  M 
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
             N  P+V+T+T LI G++  G + +A  +   M+K+G+TP+V TYS +I G  K + + 
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               + + M   G+AP +  YN+LLN L +   L+ A KLF  +  R   P ++TYNT++
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 601 CGYC 604
              C
Sbjct: 367 RALC 370



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 193/401 (48%), Gaps = 6/401 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           R  +P   T N +       G++     ++  ++  G       +  LI+  CK    ++
Sbjct: 4   RRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDE 63

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A++L + M         I YS +I+ L K  R++E  EL+   + R    D + +  +++
Sbjct: 64  AYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELI-EKMARYAPPDALTYGPIVE 122

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                  +  A+ T + M   G  P+   Y+ ++ GLCQ+ ++ EA  LF +++ +R+ P
Sbjct: 123 RLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINP 182

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFF 441
           +++TY++LI+G CK+ ++   + L+  M  +G  P  V  + LI+G         A   F
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + VR   +PN+  + TL+DG  +  +     ++   M    + P+V T++ LI G    
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
             +  A  L  QM+ +G+ P V+TY+ +++ L +   +     +F+ M +    P +  Y
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           N LL  L     LD A +L+ ++  +G  PD ITY+T+  G
Sbjct: 363 NTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWG 403



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 193/413 (46%), Gaps = 6/413 (1%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           G   +  + +G  + G +E    +++ +++ G+         ++  LC  G    A  L 
Sbjct: 9   GAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLL 68

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             + L   K   + +ST+IN  CK  ++E+A +L   M      PD + Y  +++ L K 
Sbjct: 69  HTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGPIVERLCKT 127

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
            R+ +    +     RG+K D  +++ V+        V  A   +++M+     PNV++Y
Sbjct: 128 KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTY 187

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI GLC+  R+  A  LF ++  +   P+ ++Y++LIDGFCK   L     ++D M++
Sbjct: 188 NTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR 247

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
               P+ V  + LI+GL     +  A       V+  + PN+  ++ L+DG C+++R  +
Sbjct: 248 SNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDE 307

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             KL   M    I P V+T+ +L+  +     L  A  LF  M +R   P V+TY+ ++ 
Sbjct: 308 AHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLR 367

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            L   K +     ++  M   G  PD   Y+ L   L +   +  A +L  ++
Sbjct: 368 ALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 153/328 (46%), Gaps = 31/328 (9%)

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           ++P    ++ + DG  KAGRL++  E+    ++ G  L    +  ++     +G+   A 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           +    M    F    I+YS +I  LC+  R+ EA  L  + + R   P  LTY  +++  
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELI-EKMARYAPPDALTYGPIVERL 124

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNT 458
           CK+ ++ D  +  + M  RG+KPDA                              FI+N 
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDA------------------------------FIYNF 154

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ G C+ ++  +   LF  M    I P+V+T+  LI G+     + +A  LF +M  +G
Sbjct: 155 VLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG 214

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
             P  ++Y+ +I G  K K++     +F  M R+   P++  Y  L++ L K   + AA 
Sbjct: 215 YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAA 274

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSL 606
           ++   +  +G+ P++ TY+ +I G+C +
Sbjct: 275 EVLDGMVKKGVTPNVATYSCLIDGFCKV 302



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 145/278 (52%), Gaps = 8/278 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+F++    +  K++E+  +F  M    I  +P++V    L++ L  +  +   Y+L + 
Sbjct: 152 YNFVLSGLCQEEKVEEARLLFEKMVKQRI--NPNVVTYNTLINGLCKAWRIETAYELFKE 209

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M GKG+      Y  L++G  +K  +  A  +  ++++   VPN+VT   ++  L  +G+
Sbjct: 210 MAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGK 269

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A+ + D ++  G  PNV T+S LI+ FCK  ++++A +L   M+   + P ++ Y+I
Sbjct: 270 VQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNI 329

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L++ L +A +L++  +L      R     VV +++++ A      +  A + Y  M+  G
Sbjct: 330 LLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG 389

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
             P+ I+Y  L  GL + G++ EA  L  ++ + +  P
Sbjct: 390 CPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 115/230 (50%), Gaps = 6/230 (2%)

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----D 436
           +RR+ P   T++++ DGF K+G+L     +Y  M++ G    A    +LI+ L      D
Sbjct: 3   LRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFD 62

Query: 437 ALRFFFQSVRMTLIPNLFI-FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
                  ++R+       I ++T+++  C+L R  +  +L   M  Y   PD +T+  ++
Sbjct: 63  EAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGPIV 121

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
             +     +  A+    +M  RG+ PD   Y+ ++ GL + + +     +F+ M +  + 
Sbjct: 122 ERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           P++  YN L+N L K   ++ A +LF ++  +G  P  ++YNT+I G+C 
Sbjct: 182 PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 231


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 218/443 (49%), Gaps = 5/443 (1%)

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           L   M  +    Y  L+N     G I  A      ++  G  P+       +   C  G 
Sbjct: 63  LASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGM 122

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  +F ++ L G      T++ L++       + +A  ++  M      PD  +Y+ 
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYAT 182

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++ GL +AGR +E   LL  A+  G + ++VV+++++D Y   G++  A++ ++ M    
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV +Y+ LI GLC+ G++  A  LF +++   LEP+++TY++LI G C  G L+  F
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L   M   GL P+    S+LI+ L     + +A  F    V+  +  N  ++ +L+DG 
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +     +L   M      PD  +++ LI G+  Q  LS A L+   M+++G+    
Sbjct: 363 CKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP 422

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY+ II  L +         +F  M   G+ PDI  Y V +    +E  ++ A  +  Q
Sbjct: 423 VTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + DRG+ P+++TYNT+I GY +L
Sbjct: 483 MVDRGVFPNLVTYNTLIRGYANL 505



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 227/486 (46%), Gaps = 47/486 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY-YKLCRAM 173
           Y+ L+   +  G + E++ +F  M             R  SC  D++      + LC A 
Sbjct: 145 YTALLHGLLGAGMVREAMTVFVGM-------------RADSCAPDTHVYATMVHGLCEAG 191

Query: 174 R------------GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           R              GF     VY  L++G    G +E+A  +   +      PN+ T  
Sbjct: 192 RTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYT 251

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           +++  LC +G++  A  LF  ++  G +PNVVT++ LI   C E  L+ AF+L +LM   
Sbjct: 252 ELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETN 311

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            LVP+   +S+LID L K  +++E    L + + +G+K++ VV++S++D     G +  A
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            +   +M++ GF+P+  SYS LI GLC+Q +L +A  +   ++ + ++ S +TY+ +ID 
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPN 452
             +         ++D MI  G+ PD V  ++ +      G M DA     Q V   + PN
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI---- 508
           L  +NTL+ G   L   +     F +M     KP+  ++TVL+R +  + S  +++    
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551

Query: 509 --------LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
                   +L   + +R L      YS  I  L +   +    H F  M+   + P   +
Sbjct: 552 IADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDV 611

Query: 561 YNVLLN 566
           Y  +++
Sbjct: 612 YTSIID 617



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 228/479 (47%), Gaps = 15/479 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR--- 171
           Y+ LI  Y   G I  + +    +   G  L+PD      S ++     G     CR   
Sbjct: 75  YTTLINAYCLAGDIPAAKQHLTSLLHAG--LAPDSYA-YTSFVLGYCRAGMLTHACRVFV 131

Query: 172 --AMRG--KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
              +RG  +    Y  L++GLL  G++  A  +   +      P+      ++  LC  G
Sbjct: 132 LMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAG 191

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A  L +  +  G +PN+V ++ LI+ +C   ++E A +++  M      P++  Y+
Sbjct: 192 RTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYT 251

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL K+G+++    L    ++ GL+ +VV +++++      G +  A +    M   
Sbjct: 252 ELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETN 311

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +PN  ++S+LI  LC++ ++ EA    G ++ + ++ + + Y+SLIDG CK+GK+   
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L   MI  G  PDA   S LI+GL     +  A       +   +  +   +  ++D 
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             R   +    K+F  M    I PD++T+TV +R    +G +  A  +  QM+ RG+ P+
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           ++TY+ +I G      +S     F++M   G  P+   Y VLL +++K+ + D ++ ++
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW 550


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 247/509 (48%), Gaps = 41/509 (8%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  ++R  L      ++ L+ ++ R G I E+ +   YMS M I  S D+     +C++D
Sbjct: 482 FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKI--SFDVAS--FNCIID 537

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
           S                 +C          ++G +  AF ++  +++ G+ P+I T   +
Sbjct: 538 S-----------------YC----------QRGNVLEAFSVYDNMVRHGWPPDICTYGSL 570

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           L+ LC  G +  A      LL      +  T +TL+   CK   L++A  L   M+  ++
Sbjct: 571 LRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNI 630

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +PD   Y+IL+DG  K G++     LL   L++GL  D + ++ +++  V  G V  A  
Sbjct: 631 LPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASY 690

Query: 340 TYDRML-NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
            +  ++   G   + I+Y+ ++ G  + G++ E   L   +    + PS  +Y+ L+ G+
Sbjct: 691 MFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGY 750

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSV--RMTLIP 451
            K G+L     LY +M+K G+KPD V   LLI      GL+  A++F  + V     L P
Sbjct: 751 IKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQP 810

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
               +  L++  CR+       +L   M    + P  +  + ++RG+   G +  AI++F
Sbjct: 811 KHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVF 870

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI-K 570
             +++ G+ P + T++ ++HGL K   I    H+ +LME  G+  D+  YNVL+  L  K
Sbjct: 871 SSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNK 930

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +C  D AL L+ ++  +GL P+I TY T+
Sbjct: 931 KCICD-ALDLYEEMKSKGLLPNITTYITL 958



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 150/675 (22%), Positives = 276/675 (40%), Gaps = 142/675 (21%)

Query: 71  IHVLLQSDMRDVASHVFDKMVIQ-FGKTYNFFRLFR-----DSLGDFGCDYSFLIENYVR 124
           +H+L+Q+ M   A  V   + +  F  +  F  L R     D    F  D   L+  YV+
Sbjct: 115 VHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVD--LLVNAYVK 172

Query: 125 IGKIDESVEIFAYMSDMG-------------------------IYLSPDLVQR----LMS 155
            GK+ ++     +M + G                         ++L   L ++    + +
Sbjct: 173 EGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTT 232

Query: 156 CLVDSNSVGQYYKLCRAM---------RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
           C +  NS+    KL +A          R      Y  ++N  ++KG  ++A  +   + +
Sbjct: 233 CNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEK 292

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G   ++ T N ++ +LC   +   A  L   +  V   P+  +++TLI+ F  E K+  
Sbjct: 293 NGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINL 352

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE--------------------GNELL 306
           A  ++N M+   L P +  Y+ LIDG  + GR  E                      ++L
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQIL 412

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              L  G+  DV+ +S++++    +G +    +   RM   G LPN + Y+ L+   C+ 
Sbjct: 413 KCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKA 472

Query: 367 GRLVEA-----------------------CGLFGQVLIRRLEP------------SLLTY 391
           G   EA                       C  + + +I   E              + ++
Sbjct: 473 GHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASF 532

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL------------------ 433
           + +ID +C+ G + + FS+YDNM++ G  PD      L+ GL                  
Sbjct: 533 NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 592

Query: 434 ----------------------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
                                 + +AL    + V   ++P+ + +  L+DG C+  +   
Sbjct: 593 KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVP 652

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML-KRGLTPDVITYSAII 530
            + L  +M    + PD I +T L+ G+ ++G + +A  +F +++ K GL  D I Y++++
Sbjct: 653 ALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMM 712

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +G  KG  I+    + + M  N V P  A YN+L++  IK+  L   L L+  +   G++
Sbjct: 713 NGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIK 772

Query: 591 PDIITYNTIICGYCS 605
           PD +TY  +I G C 
Sbjct: 773 PDNVTYRLLIFGLCE 787



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 153/671 (22%), Positives = 263/671 (39%), Gaps = 173/671 (25%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++  YV+ G+   ++ I   M   GI         ++  L       + Y L + MR
Sbjct: 267 YNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMR 326

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING--- 227
                   C Y  L++G   +G I  A ++  Q++++   P++ T   ++   C NG   
Sbjct: 327 EVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTD 386

Query: 228 -----------------QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
                            ++  A  +   +L  G  P+V+T+S LIN  CK   + +  ++
Sbjct: 387 EARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEI 446

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG-------------------NELLLTALD 311
            + M +  ++P+ ++Y+ L+    KAG  KE                    N LL +   
Sbjct: 447 LSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYR 506

Query: 312 RGL----------------KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G+                  DV  F+ ++D+Y   G+V  A   YD M+  G+ P++ +
Sbjct: 507 EGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICT 566

Query: 356 YSILIKGLCQQGRLV-----------------------------------EACGLFGQVL 380
           Y  L++GLCQ G LV                                   EA  L  +++
Sbjct: 567 YGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMV 626

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD---- 436
            R + P   TY+ L+DGFCK GK+     L   M+++GL PD +  + L+NGL+ +    
Sbjct: 627 TRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVK 686

Query: 437 ALRFFFQSV-------------------------------------RMTLIPNLFIFNTL 459
           A  + FQ +                                        + P+   +N L
Sbjct: 687 AASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 746

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM----- 514
           M G  +  + + T+ L+  M    IKPD +T+ +LI G+   G +  A+    +M     
Sbjct: 747 MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEES 806

Query: 515 ---------------------------LKR-----GLTPDVITYSAIIHGLFKGKNISVG 542
                                      LK      G+ P  +  S+I+ GL K   +   
Sbjct: 807 GLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEA 866

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           + +F  + R G+ P IA +  L++ L KE  +D A  L   +   GL+ D++TYN +I G
Sbjct: 867 IIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITG 926

Query: 603 YCSLNSCLIDG 613
            C+   C+ D 
Sbjct: 927 LCN-KKCICDA 936



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 149/314 (47%), Gaps = 7/314 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIF-AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           Y+ L+   V  G++  +  +F   +   G+Y        +M+  +    + +  +L R M
Sbjct: 672 YTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNM 731

Query: 174 RGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
                      Y  LM+G ++KG +    +++R +++ G  P+ VT   ++  LC  G I
Sbjct: 732 HENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLI 791

Query: 230 GNASSLFDVLLL--VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
             A    + ++L   G +P    +  LINA C+   ++ AF+L   M  + +VP  +  S
Sbjct: 792 EIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAES 851

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            ++ GL K G+++E   +  + +  G+   +  F+++M        +  A      M + 
Sbjct: 852 SIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESC 911

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G   +V++Y++LI GLC +  + +A  L+ ++  + L P++ TY +L      +G ++DG
Sbjct: 912 GLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDG 971

Query: 408 FSLYDNMIKRGLKP 421
             L  ++  RG+ P
Sbjct: 972 EKLLKDIEDRGIVP 985



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 146/331 (44%), Gaps = 18/331 (5%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           L++ L+       AS++F +++ + G       L+ D +      Y+ ++  Y++ G+I+
Sbjct: 675 LLNGLVNEGQVKAASYMFQEIICKEG-------LYADCIA-----YNSMMNGYLKGGQIN 722

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLM 185
           E   +   M +  +Y S      LM   +    + +   L R M  +G       Y  L+
Sbjct: 723 EIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLI 782

Query: 186 NGLLRKGVIENAFHMHRQVI--QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
            GL   G+IE A     +++  + G  P       ++   C  G I  A  L + +  +G
Sbjct: 783 FGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALG 842

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+ V  S+++   CK  K+E+A  +++ +M   +VP +  ++ L+ GL K  ++ +  
Sbjct: 843 VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAF 902

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L       GLK+DVV ++ ++        +  A+  Y+ M + G LPN+ +Y  L   +
Sbjct: 903 HLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAM 962

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
              G + +   L   +  R + PS     SL
Sbjct: 963 YATGTMQDGEKLLKDIEDRGIVPSYKHPESL 993


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 221/469 (47%), Gaps = 45/469 (9%)

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
           GF V++ L + L+ + + E A     ++ +    P   +CN +L +    G+       F
Sbjct: 62  GFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFF 121

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             ++  G KP V T++ +I+  CKE  +E A  L+  M    L+PD + Y+ +IDG  K 
Sbjct: 122 KDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKV 181

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GRL +             + DV+ ++++++ +   G + + ++ +  M   G  PNV+SY
Sbjct: 182 GRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSY 241

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLE--PSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           S L+   C++  + +A   +  V +RRL   P+  TY+SL+D +CK G L D F L D M
Sbjct: 242 STLVDAFCKEDMMQQALKFY--VDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEM 299

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            + G++ + V  + LI+GL     + +A   F + V   +IPNL  +  L+ G  + K  
Sbjct: 300 SQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNM 359

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              ++L   M    IKPD++ +   I  +     + +A ++  +M ++G+  +   Y+ +
Sbjct: 360 DRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTL 419

Query: 530 IHGLFKGKNISV-------------------------GLHMFKLMERN-----------G 553
           +   FK +N S                          GL   KL+ +            G
Sbjct: 420 MDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFG 479

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +  + AIY  +++ L KE  ++AA  LF Q+  +GL PD   Y ++I G
Sbjct: 480 LQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDG 528



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 260/570 (45%), Gaps = 55/570 (9%)

Query: 32  FNQANAILANLIKTNNPTPAIQFFK--WTHNCVSSPNIA---QLIHVLLQSDMRDVASHV 86
           +  AN IL  ++ +         F   W+   V  P       L  VL++ DM + A   
Sbjct: 26  YYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQC 85

Query: 87  FDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLS 146
           F KM     K    F   R   G        L+  + R+GK D     F  M  +G    
Sbjct: 86  FSKM-----KRCRVFPKTRSCNG--------LLHKFARLGKTDGMKRFFKDM--IGAGSK 130

Query: 147 PDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
           P +                               Y  +++ + ++G IE A  +  ++  
Sbjct: 131 PTVF-----------------------------TYNIMIDCMCKEGDIEAASGLFEEMKF 161

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           RG +P+ VT N ++      G++ +    F+ +  +  +P+V+T++TLIN FCK  KL K
Sbjct: 162 RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPK 221

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
             + +  M +  L P+++ YS L+D   K   +++  +  +     GL  +   ++S++D
Sbjct: 222 GLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVD 281

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
           AY  IG++  A +  D M   G   NV++Y+ LI GLC   R+ EA  LFG+++   + P
Sbjct: 282 AYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIP 341

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFF 442
           +L +Y++LI GF K+  +     L D M  RG+KPD ++    I  L G    +A +   
Sbjct: 342 NLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVM 401

Query: 443 QSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
             ++   I  N FI+ TLMD   + +  ++ + L   M   +I+   +T  VLI G+   
Sbjct: 402 NEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKN 461

Query: 502 GSLSSAILLFFQMLKR-GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
             +S AI  F ++    GL  +   Y+A+I GL K   +     +F+ M + G+ PD   
Sbjct: 462 KLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTA 521

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           Y  L++  +K+ N+  AL L  ++ + G+E
Sbjct: 522 YTSLIDGKLKQGNVVQALALRDKMAEIGVE 551



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 198/409 (48%), Gaps = 18/409 (4%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPK--PNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           N+IL+ + ++        +FDVL        P    F  L +   +E   E+A Q ++ M
Sbjct: 30  NRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKM 89

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
               + P     + L+    + G+           +  G K  V  ++ ++D     GD+
Sbjct: 90  KRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDI 149

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A   ++ M   G +P+ ++Y+ +I G  + GRL +    F ++     EP ++TY++L
Sbjct: 150 EAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTL 209

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTL 449
           I+ FCK GKL  G   +  M + GLKP+ V  S L++      +M  AL+F+    R+ L
Sbjct: 210 INCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGL 269

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
           +PN   + +L+D  C++   +D  +L   M    ++ +V+T+T LI G+     +  A  
Sbjct: 270 VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEE 329

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           LF +M+  G+ P++ +Y+A+IHG  K KN+   L +   M+  G+ PD+ +Y   +  L 
Sbjct: 330 LFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLC 389

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
               ++AA  +  ++ ++G++ +   Y T           L+D YFKS+
Sbjct: 390 GLEKIEAAKVVMNEMQEKGIKANTFIYTT-----------LMDAYFKSE 427



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 162/361 (44%), Gaps = 48/361 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLC 170
           Y+ LI  + + GK+ + +E F  M   G  L P++V    S LVD+    + + Q  K  
Sbjct: 206 YNTLINCFCKFGKLPKGLEFFREMKQSG--LKPNVVS--YSTLVDAFCKEDMMQQALKFY 261

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             MR  G       Y  L++   + G + +AF +  ++ Q G   N+VT   ++  LC  
Sbjct: 262 VDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDV 321

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            +I  A  LF  ++  G  PN+ +++ LI+ F K   +++A +L + M    + PDL++Y
Sbjct: 322 ERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLY 381

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD------------- 333
              I  L    +++    ++    ++G+K +  +++++MDAY    +             
Sbjct: 382 GTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLE 441

Query: 334 ----------------------VGRAVQTYDRMLNG-GFLPNVISYSILIKGLCQQGRLV 370
                                 V +A+  + R+ N  G   N   Y+ +I GLC++ ++ 
Sbjct: 442 LDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVE 501

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
            A  LF Q+  + L P    Y+SLIDG  K G +    +L D M + G++  A    L  
Sbjct: 502 AATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGARFGDLCQ 561

Query: 431 N 431
           N
Sbjct: 562 N 562


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 228/495 (46%), Gaps = 40/495 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS---NSVGQYYKLCR 171
           Y  L+  YVR GK D  +E F  M   G         R +  LV +   + V +YY +  
Sbjct: 161 YRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMAL 220

Query: 172 AMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           A   KGFC+    Y   ++ L +   IE    +   + + G  P+I  CN  +  LC   
Sbjct: 221 A---KGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQN 277

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ +A  + + +   G  P+VVT+ T+++  C   K  +A  L+  M++ DL PD+    
Sbjct: 278 RLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCG 337

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL K  ++ E  EL    L   ++L V ++++++  +   G + +A +    M   
Sbjct: 338 ALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTN 397

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P++++Y+IL+   C  G + +A  L  ++    + P   +Y+ L+ G CK+ +L   
Sbjct: 398 GCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKA 457

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           F+   + ++ G   D V C++LI                              D  C+ K
Sbjct: 458 FAFVSDHMEVGGFCDTVSCNILI------------------------------DAFCKTK 487

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +    ++LF  MG   ++ D +T+  LI G+ S G  + A  LF QML   + P+V  Y+
Sbjct: 488 KVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYN 547

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++H L K  +      +F  M +  V+PD   +N L+  L K      AL LF  +  R
Sbjct: 548 IMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTR 607

Query: 588 GLEPDIITYNTIICG 602
           G+EPD +T+  +I G
Sbjct: 608 GVEPDTLTFKYLISG 622



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 148/299 (49%), Gaps = 6/299 (2%)

Query: 145 LSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAF 198
           L PD+     L+  L  +N V + ++L   M         C+Y  L++G  R G I+ A+
Sbjct: 329 LKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAY 388

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
            +   +   G  P+IVT N +L   C  G +  A  L   +   G  P+  +++ L+   
Sbjct: 389 KIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGL 448

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           CK  +L+KAF   +  ME+    D +  +ILID   K  ++K   EL      +G++ D 
Sbjct: 449 CKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADA 508

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           V + ++++    +G    A + +++MLN    PNV  Y+I++  LC+ G    A  +F  
Sbjct: 509 VTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSH 568

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA 437
           ++ + + P  +T+++LI    K  +  +  +L+ +M  RG++PD +    LI+GL+ + 
Sbjct: 569 MIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEG 627



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 152/311 (48%), Gaps = 4/311 (1%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYE 182
           K+DE+ E+ + M  + I LS  +   L+S    + S+ + YK+   MR  G       Y 
Sbjct: 348 KVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYN 407

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
            L+N     G++E A  + R++   G  P+  + N++LK LC   Q+  A +     + V
Sbjct: 408 ILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEV 467

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G   + V+ + LI+AFCK  K++ A +L+  M    +  D + Y  LI+GLF  G     
Sbjct: 468 GGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLA 527

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            EL    L+  +  +V +++ ++     +G   RA   +  M+     P+ ++++ LI  
Sbjct: 528 EELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYW 587

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           L ++ R +EA  LF  +  R +EP  LT+  LI G    GK    + +++ M++ G+  D
Sbjct: 588 LGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILD 647

Query: 423 AVVCSLLINGL 433
             V   LI+ L
Sbjct: 648 REVSERLISVL 658



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/494 (21%), Positives = 213/494 (43%), Gaps = 19/494 (3%)

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKG 192
           E    +  + + L P +V  ++  L DS +  ++Y    A    GF   +F +  L+   
Sbjct: 76  EPLVELERLDVELDPIVVNLVVRGLSDSETAVRFYWW--AESRPGFDHSQFAIAYLVSLL 133

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI--GNASSL---FDVLLLVGPKPN 247
            ++  F +  + + R      V  ++ L R+ ++G +  G   S+   FD +++ G +  
Sbjct: 134 FMDGNFALLSEFLGR-VKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREF 192

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
            V ++  I    K    +   + Y++ +          YS  I  L ++ R++   ELL+
Sbjct: 193 GVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLV 252

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
                G   D+   +  +        +  A+Q  ++M   G  P+V++Y  ++ GLC   
Sbjct: 253 DMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNK 312

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           +  EA GL+ +++ R L+P + +  +LI G CK+ K+ + F L   M+   ++    + +
Sbjct: 313 KFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYN 372

Query: 428 LLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            LI+G      +  A +           P++  +N L++  C +       KL   M   
Sbjct: 373 ALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETS 432

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
            + PD  ++  L++G+     L  A       ++ G   D ++ + +I    K K +   
Sbjct: 433 GVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSA 492

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L +FK M   G+  D   Y  L+N L      + A +LF Q+ +  ++P++  YN ++  
Sbjct: 493 LELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHH 552

Query: 603 YCSLNSCLIDGYFK 616
            C +      G+FK
Sbjct: 553 LCKV------GHFK 560


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 218/443 (49%), Gaps = 5/443 (1%)

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           L   M  +    Y  L+N     G I  A      ++  G  P+       +   C  G 
Sbjct: 63  LASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGM 122

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  +F ++ L G      T++ L++       + +A  ++  M      PD  +Y+ 
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++ GL +AGR +E   LL  A+  G + ++VV+++++D Y   G++  A++ ++ M    
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNV +Y+ LI GLC+ G++  A  LF +++   LEP+++TY++LI G C  G L+  F
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L   M   GL P+    S+LI+ L     + +A  F    V+  +  N  ++ +L+DG 
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+  +     +L   M      PD  +++ LI G+  Q  LS A L+   M+++G+    
Sbjct: 363 CKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP 422

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY+ II  L +         +F  M   G+ PDI  Y V +    +E  ++ A  +  Q
Sbjct: 423 VTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + DRG+ P+++TYNT+I GY +L
Sbjct: 483 MVDRGVFPNLVTYNTLIRGYANL 505



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 228/471 (48%), Gaps = 38/471 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY-YKLCRAM 173
           Y+ L+   +  G + E++ +F  M             R  SC  D++      + LC A 
Sbjct: 145 YTALLHGLLGAGMVREAMAVFVGM-------------RADSCAPDTHVYATMVHGLCEAG 191

Query: 174 R------------GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           R              GF     VY  L++G    G +E+A  +   +      PN+ T  
Sbjct: 192 RTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYT 251

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           +++  LC +G++  A  LF  ++  G +PNVVT++ LI   C E  L+ AF+L +LM   
Sbjct: 252 ELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETN 311

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            LVP+   +S+LID L K  +++E    L + + +G+K++ VV++S++D     G +  A
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            +   +M++ GF+P+  SYS LI GLC+Q +L +A  +   ++ + ++ S +TY+ +ID 
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPN 452
             +         ++D MI  G+ PD V  ++ +      G M DA     Q V   + PN
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           L  +NTL+ G   L   +     F +M     KP+  ++TVL+R +  + S  +++ ++ 
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551

Query: 513 QMLKRGLTP---DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
               + L     D I +  +I+GL +  +++    +  +M+ +G  P   I
Sbjct: 552 IADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTI 602



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 228/479 (47%), Gaps = 15/479 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR--- 171
           Y+ LI  Y   G I  + +    +   G  L+PD      S ++     G     CR   
Sbjct: 75  YTTLINAYCLAGDIPAAKQHLTSLLHAG--LAPDSYA-YTSFVLGYCRAGMLTHACRVFV 131

Query: 172 --AMRG--KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
              +RG  +    Y  L++GLL  G++  A  +   +      P+      ++  LC  G
Sbjct: 132 LMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAG 191

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +   A  L +  +  G +PN+V ++ LI+ +C   ++E A +++  M      P++  Y+
Sbjct: 192 RTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYT 251

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL K+G+++    L    ++ GL+ +VV +++++      G +  A +    M   
Sbjct: 252 ELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETN 311

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G +PN  ++S+LI  LC++ ++ EA    G ++ + ++ + + Y+SLIDG CK+GK+   
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L   MI  G  PDA   S LI+GL     +  A       +   +  +   +  ++D 
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             R   +    K+F  M    I PD++T+TV +R    +G +  A  +  QM+ RG+ P+
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           ++TY+ +I G      +S     F++M   G  P+   Y VLL +++K+ + D ++ ++
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW 550


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 237/509 (46%), Gaps = 19/509 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +I  Y ++G  + +VE+F  + + G   S  +   ++  L+  N +   Y + R M+  G
Sbjct: 116 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 175

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
           F      Y  L+  L +   ++ A  +  ++  +G  PN V+   ++  +C  G +    
Sbjct: 176 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGR 235

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L +       +P V  ++ LIN  CKE   +   +L + M+E  + P++I YS LI+ L
Sbjct: 236 QLAERF-----EPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINEL 290

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-GFLPN 352
             +G+++    LL   L RG   ++   SS++      G    A+  +++M+ G G  PN
Sbjct: 291 SNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPN 350

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V++Y+ L++G C  G + +A  +F  +      P++ TY SLI+GF K G L     +++
Sbjct: 351 VVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWN 410

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M+  G  P+ VV + ++  L       +A        +    P++  FN  + G C   
Sbjct: 411 KMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 470

Query: 468 RATDTVKLFMLMGM-YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           R     K+F  M   Y   P+++T+  L+ G+A    +  A  L  ++  RG+     TY
Sbjct: 471 RLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTY 530

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT- 585
           + ++HG        + L +   M  NG +PD    N+++    K+   + A+++   ++ 
Sbjct: 531 NTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSC 590

Query: 586 -DRGLEPDIITYNTIICGYCSLNSCLIDG 613
             R   PD+I+Y  +I G C  N C  DG
Sbjct: 591 GRRKWRPDVISYTNVIWGLCRSN-CREDG 618



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 263/557 (47%), Gaps = 31/557 (5%)

Query: 63  SSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENY 122
            SPN A++    +   +R  +      + + F K+     LF+ +   F      +I   
Sbjct: 33  ESPNHAEIKESAVLKRLRQESC---VPLALHFFKSIANSNLFKHTPLTF----EVMIRKL 85

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL----VDSNSVGQYYKLCRAMRGKGF 178
              G++D    +   M   G + S DL   ++S      +   +V  +Y++         
Sbjct: 86  AMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSV 145

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            +Y  +++ LL +  I+  + ++R + + GF PN+ T N +LK LC N ++  A  L   
Sbjct: 146 KIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVE 205

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G  PN V+++T+I++ C+   +++  QL          P + +Y+ LI+GL K   
Sbjct: 206 MSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAE-----RFEPVVSVYNALINGLCKERD 260

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            K G EL+   +++G+  +V+ +S++++     G +  A     +ML  G  PN+ + S 
Sbjct: 261 YKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSS 320

Query: 359 LIKGLCQQGRLVEACGLFGQVLIR--RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           L+KG   +G   +A  ++ Q +IR   L+P+++ Y++L+ GFC  G +    S++ +M +
Sbjct: 321 LVKGCFVRGTTFDALDMWNQ-MIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEE 379

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G  P+      LING      +  A+  + + +     PN+ ++ ++++  CR  +  +
Sbjct: 380 IGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKE 439

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDVITYSAII 530
              L  +M   N  P V T    I+G+   G L  A  +F QM ++    P+++TY+ ++
Sbjct: 440 AESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELL 499

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL---DAALKLFGQLTDR 587
            GL K   I     + + +   GV    + YN LL+     CN      AL+L G++   
Sbjct: 500 DGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLH---GSCNAGLPGIALQLVGKMMVN 556

Query: 588 GLEPDIITYNTIICGYC 604
           G  PD IT N II  YC
Sbjct: 557 GKSPDEITMNMIILAYC 573



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 214/440 (48%), Gaps = 22/440 (5%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK--ILKRLCINGQIG---NASS 234
            +E ++  L   G +++  ++ +Q+  +GF      C++   +  + +  Q+G    A  
Sbjct: 77  TFEVMIRKLAMDGQVDSVQYLLQQMKLQGF-----HCSEDLFISVISVYRQVGLAERAVE 131

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  +   G  P+V  ++ +++    E +++  + +Y  M      P++  Y++L+  L 
Sbjct: 132 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 191

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  ++    +LL+   ++G   + V +++V+ +   +G V    Q  +R     F P V 
Sbjct: 192 KNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAER-----FEPVVS 246

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ LI GLC++        L  +++ + + P++++YS+LI+    SG++   FSL   M
Sbjct: 247 VYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQM 306

Query: 415 IKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVR-MTLIPNLFIFNTLMDGCCRLKR 468
           +KRG  P+     ++V    + G   DAL  + Q +R   L PN+  +NTL+ G C    
Sbjct: 307 LKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 366

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               V +F+ M      P++ T+  LI G   +GSL  A+ ++ +ML  G  P+V+ Y++
Sbjct: 367 IDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTS 426

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR- 587
           ++  L +         + ++M +   AP +  +N  +  L     LD A K+F Q+  + 
Sbjct: 427 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQY 486

Query: 588 GLEPDIITYNTIICGYCSLN 607
              P+I+TYN ++ G    N
Sbjct: 487 RCPPNIVTYNELLDGLAKAN 506



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 177/350 (50%), Gaps = 9/350 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L+N L   G IE AF +  Q+++RG  PNI T + ++K   + G   +A  +++ ++
Sbjct: 283 YSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMI 342

Query: 241 L-VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +PNVV ++TL+  FC    ++KA  ++  M E+   P++  Y  LI+G  K G L
Sbjct: 343 RGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSL 402

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +    +    L  G   +VVV++S+++A         A    + M      P+V +++  
Sbjct: 403 EGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 462

Query: 360 IKGLCQQGRLVEACGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           IKGLC  GRL  A  +F Q+  + R  P+++TY+ L+DG  K+ ++ + + L   +  RG
Sbjct: 463 IKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 522

Query: 419 LKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           ++      + L++G     L G AL+   + +     P+    N ++   C+  +A   V
Sbjct: 523 VEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAV 582

Query: 474 KLFMLM--GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           ++  L+  G    +PDVI++T +I G+         ++LF +M+   + P
Sbjct: 583 QMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 115/495 (23%), Positives = 223/495 (45%), Gaps = 29/495 (5%)

Query: 82  VASHVFDKMVIQ--FGKTYNFFR-LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM 138
           + +HV D ++ +      Y  +R + RD        Y+ L++   +  K+D + ++   M
Sbjct: 147 IYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM 206

Query: 139 SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAF 198
           S+ G   +      ++S + +   V +  +L          VY  L+NGL ++   +   
Sbjct: 207 SNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE-PVVSVYNALINGLCKERDYKGGV 265

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
            +  +++++G  PN+++ + ++  L  +GQI  A SL   +L  G  PN+ T S+L+   
Sbjct: 266 ELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGC 325

Query: 259 CKEAKLEKAFQLYNLMME-MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
                   A  ++N M+    L P+++ Y+ L+ G    G + +   + L   + G   +
Sbjct: 326 FVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPN 385

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           +  + S+++ +   G +  AV  +++ML  G  PNV+ Y+ +++ LC+  +  EA  L  
Sbjct: 386 IRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIE 445

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR-GLKPDAVVCSLLINGLM-- 434
            +      PS+ T+++ I G C +G+L     ++  M ++    P+ V  + L++GL   
Sbjct: 446 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKA 505

Query: 435 -------GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                  G     F + V  +       +NTL+ G C        ++L   M +    PD
Sbjct: 506 NRIEEAYGLTREIFMRGVEWST----STYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPD 561

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQML------KRGLTPDVITYSAIIHGLFKGKNISV 541
            IT  ++I     QG    A+    QML      +R   PDVI+Y+ +I GL +      
Sbjct: 562 EITMNMIILAYCKQGKAERAV----QMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRED 617

Query: 542 GLHMFKLMERNGVAP 556
           G+ +F+ M    + P
Sbjct: 618 GVILFERMISERIIP 632



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 144/337 (42%), Gaps = 74/337 (21%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G T++   ++   +  FG       Y+ L++ +   G ID++V +F +M ++G   SP++
Sbjct: 329 GTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGC--SPNI 386

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
                                          Y  L+NG  ++G +E A ++  +++  G 
Sbjct: 387 R-----------------------------TYGSLINGFTKRGSLEGAVYIWNKMLTSGC 417

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PN+V    +++ LC + +   A SL +++      P+V TF+  I   C   +L+ A +
Sbjct: 418 CPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 477

Query: 270 LYNLM-MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD-- 326
           ++  M  +    P+++ Y+ L+DGL KA R++E   L      RG++     +++++   
Sbjct: 478 VFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGS 537

Query: 327 ---------------------------------AYVGIGDVGRAVQTYDRMLNG--GFLP 351
                                            AY   G   RAVQ  D +  G   + P
Sbjct: 538 CNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRP 597

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
           +VISY+ +I GLC+     +   LF +++  R+ P L
Sbjct: 598 DVISYTNVIWGLCRSNCREDGVILFERMISERIIPIL 634


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic; AltName: Full=Protein PROTON GRADIENT
            REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 152/609 (24%), Positives = 289/609 (47%), Gaps = 66/609 (10%)

Query: 44   KTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRL 103
            K+ +   A++ F+       +PNI     V   + +  +A    D+   Q         L
Sbjct: 445  KSGDSVSALETFEKMKTKGIAPNI-----VACNASLYSLAKAGRDREAKQIFYGLKDIGL 499

Query: 104  FRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
              DS+      Y+ +++ Y ++G+IDE++++ + M + G      +V  L++ L  ++ V
Sbjct: 500  VPDSV-----TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554

Query: 164  GQYYKL---CRAMRGKGFCV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
             + +K+    + M+ K   V Y  L+ GL + G I+ A  +   ++Q+G  PN +T N +
Sbjct: 555  DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614

Query: 220  LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
               LC N ++  A  +   ++ +G  P+V T++T+I    K  ++++A   ++ M ++ +
Sbjct: 615  FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 673

Query: 280  VPDLIIYSILIDGLFKAGRLKEGNELLLTAL----DRGLKLDVVVFSSVMDAYVGIGDVG 335
             PD +    L+ G+ KA  +++  +++   L    D+   L    +  ++ + +    + 
Sbjct: 674  YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL---FWEDLIGSILAEAGID 730

Query: 336  RAVQTYDRML-NG------------------------------------GFLPNVISYSI 358
             AV   +R++ NG                                    G  P + +Y++
Sbjct: 731  NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNL 790

Query: 359  LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            LI GL +   +  A  +F QV      P + TY+ L+D + KSGK+ + F LY  M    
Sbjct: 791  LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850

Query: 419  LKPDAVVCSLLINGLM-----GDALRFFFQSVR-MTLIPNLFIFNTLMDGCCRLKRATDT 472
             + + +  +++I+GL+      DAL  ++  +      P    +  L+DG  +  R  + 
Sbjct: 851  CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910

Query: 473  VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
             +LF  M  Y  +P+   + +LI G    G   +A  LF +M+K G+ PD+ TYS ++  
Sbjct: 911  KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970

Query: 533  LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL-TDRGLEP 591
            L     +  GLH FK ++ +G+ PD+  YN+++N L K   L+ AL LF ++ T RG+ P
Sbjct: 971  LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030

Query: 592  DIITYNTII 600
            D+ TYN++I
Sbjct: 1031 DLYTYNSLI 1039



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 217/482 (45%), Gaps = 44/482 (9%)

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF--CVYEFLM-- 185
           E++E++  M   G   S      LM  L     +     L + M   G    VY F +  
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
             L R G I  A+ + +++   G  P++VT   ++  LC   ++  A  +F+ +     K
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+ VT+ TL++ F     L+   Q ++ M +   VPD++ ++IL+D L KA         
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA--------- 376

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
                                     G+ G A  T D M + G LPN+ +Y+ LI GL +
Sbjct: 377 --------------------------GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
             RL +A  LFG +    ++P+  TY   ID + KSG        ++ M  +G+ P+ V 
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470

Query: 426 C-----SLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           C     SL   G   +A + F+    + L+P+   +N +M    ++    + +KL   M 
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
               +PDVI    LI  +     +  A  +F +M +  L P V+TY+ ++ GL K   I 
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             + +F+ M + G  P+   +N L + L K   +  ALK+  ++ D G  PD+ TYNTII
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650

Query: 601 CG 602
            G
Sbjct: 651 FG 652



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 141/582 (24%), Positives = 253/582 (43%), Gaps = 63/582 (10%)

Query: 67   IAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIG 126
            +  LI+ L ++D  D A  +F              R+    L      Y+ L+    + G
Sbjct: 541  VNSLINTLYKADRVDEAWKMF-------------MRMKEMKLKPTVVTYNTLLAGLGKNG 587

Query: 127  KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----Y 181
            KI E++E+F  M   G   +      L  CL  ++ V    K+   M   G CV     Y
Sbjct: 588  KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG-CVPDVFTY 646

Query: 182  EFLMNGLLRKGVIENA---FHMHRQVIQRGFV------PNIVTCN------KILKRLCIN 226
              ++ GL++ G ++ A   FH  ++++   FV      P +V  +      KI+     N
Sbjct: 647  NTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYN 706

Query: 227  --GQIGN--ASSLFDVLLLVGPKPNVVTFST-----------------LINAFCKEAKLE 265
               Q  N     L   +L      N V+FS                  +I   CK   + 
Sbjct: 707  CADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVS 766

Query: 266  KAFQLYN-LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
             A  L+     ++ + P L  Y++LI GL +A  ++   ++ L     G   DV  ++ +
Sbjct: 767  GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826

Query: 325  MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR- 383
            +DAY   G +    + Y  M       N I+++I+I GL + G + +A  L+  ++  R 
Sbjct: 827  LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886

Query: 384  LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
              P+  TY  LIDG  KSG+L +   L++ M+  G +P+  + ++LING         A 
Sbjct: 887  FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946

Query: 439  RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
              F + V+  + P+L  ++ L+D  C + R  + +  F  +    + PDV+ + ++I G+
Sbjct: 947  ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006

Query: 499  ASQGSLSSAILLFFQM-LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
                 L  A++LF +M   RG+TPD+ TY+++I  L     +     ++  ++R G+ P+
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066

Query: 558  IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
            +  +N L+         + A  ++  +   G  P+  TY  +
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 150/642 (23%), Positives = 280/642 (43%), Gaps = 113/642 (17%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQ---------------FGKTYNFFRLF-----RDSLG 109
           LIH+LL+S     A  V+ +M+++                GK  +   +       ++LG
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253

Query: 110 DFGCDYSFLIENYV--RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS------- 160
                Y+F I   V  R GKI+E+ EI   M D G    PD+V    + L+D+       
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC--GPDVVT--YTVLIDALCTARKL 309

Query: 161 NSVGQYYKLCRAMRGKGFCV-YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
           +   + ++  +  R K   V Y  L++       +++      ++ + G VP++VT   +
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  LC  G  G A    DV+   G  PN+ T++TLI    +  +L+ A +L+  M  + +
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429

Query: 280 VPDLIIYSILID-----------------------------------GLFKAGRLKEGNE 304
            P    Y + ID                                    L KAGR +E  +
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +     D GL  D V ++ +M  Y  +G++  A++    M+  G  P+VI  + LI  L 
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           +  R+ EA  +F ++   +L+P+++TY++L+ G  K+GK+++   L++ M+++G  P+ +
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 609

Query: 425 VCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + L + L  +     AL+  F+ + M  +P++F +NT++ G  +  +  + +  F  M
Sbjct: 610 TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAIL---------------LFFQ-----MLKRGL 519
               + PD +T   L+ G+     +  A                 LF++     +L    
Sbjct: 670 KKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG 728

Query: 520 TPDVITYS-----------------AIIHGLFKGKNISVGLHMFKLMERN-GVAPDIAIY 561
             + +++S                  II    K  N+S    +F+   ++ GV P +  Y
Sbjct: 729 IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTY 788

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           N+L+  L++   ++ A  +F Q+   G  PD+ TYN ++  Y
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 214/469 (45%), Gaps = 21/469 (4%)

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVY-----EFLMNGLLRKGVIENAFH- 199
           S + V R +    D++S   Y+K   ++ G    V+      +++  L   G +E   + 
Sbjct: 84  SSEEVTRGLKSFPDTDSSFSYFK---SVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYV 140

Query: 200 ---MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
              M +++I+R    +  T   I K L + G +  A      +   G   N  +++ LI+
Sbjct: 141 FDLMQKRIIKR----DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIH 196

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
              K     +A ++Y  M+     P L  YS L+ GL K   +     LL      GLK 
Sbjct: 197 LLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKP 256

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +V  F+  +      G +  A +   RM + G  P+V++Y++LI  LC   +L  A  +F
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
            ++   R +P  +TY +L+D F  +  L      +  M K G  PD V  ++L++ L   
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
              G+A           ++PNL  +NTL+ G  R+ R  D ++LF  M    +KP   T+
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            V I      G   SA+  F +M  +G+ P+++  +A ++ L K         +F  ++ 
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            G+ PD   YN+++    K   +D A+KL  ++ + G EPD+I  N++I
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 39/249 (15%)

Query: 27   ISDLQFNQANAILANLI----KTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDM 79
            +SD  F+        LI    K+     A Q F+   +    PN A    LI+   ++  
Sbjct: 882  MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941

Query: 80   RDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMS 139
             D A  +F +MV +           R  L      YS L++    +G++DE +  F  + 
Sbjct: 942  ADAACALFKRMVKEG---------VRPDLKT----YSVLVDCLCMVGRVDEGLHYFKELK 988

Query: 140  DMGIYLSPDLV------------QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNG 187
            + G  L+PD+V             RL   LV  N +    K  R +    +     ++N 
Sbjct: 989  ESG--LNPDVVCYNLIINGLGKSHRLEEALVLFNEM----KTSRGITPDLYTYNSLILN- 1041

Query: 188  LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
            L   G++E A  ++ ++ + G  PN+ T N +++   ++G+  +A +++  ++  G  PN
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101

Query: 248  VVTFSTLIN 256
              T+  L N
Sbjct: 1102 TGTYEQLPN 1110


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 212/402 (52%), Gaps = 8/402 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+  L + G+++ A ++ R++     +P +  CN +L  L    +   A  LFD +L  G
Sbjct: 117 LVIALSQMGLLDEALYVFRRLWT---LPALPACNAVLDGLVKARRSRCAWELFDEMLRRG 173

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+VVT++TLINA   +  + KA ++++ M+   + P++I Y+ +I  L + G + +  
Sbjct: 174 MVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAE 233

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L     + G++ +   ++ +M  +    DV  A   Y  +LN G +PN + ++ LI G 
Sbjct: 234 RLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGF 293

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+  R  EA  +F  +    + P++  Y+SL+DG  +SG  ++  SLY  M + GL PD 
Sbjct: 294 CKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDE 353

Query: 424 VVCSLLINGLM-GDALRF---FFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFML 478
             CS+++ GL  G  ++    F + VR   +  N   +N L+D  CR     + +     
Sbjct: 354 FTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTR 413

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    ++P+V++++ LI G +  G +  A+ ++ +M+ +G+ P+V+TY+A+IHG  K   
Sbjct: 414 MTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGG 473

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           I       K M  NG++P+    +VL++ L +E  +  A++ 
Sbjct: 474 IDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRF 515



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 194/436 (44%), Gaps = 61/436 (13%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+N    +G +  A  M  Q++ R   PN++T   ++  LC  G IG+A  LFD +
Sbjct: 180 TYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAM 239

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +PN  T++ L++  C+   +  AF LY  ++   L+P+ ++++ LIDG  KA R 
Sbjct: 240 KEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRF 299

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E  ++       G+   V V++S+MD     GD   A+  Y  M   G  P+  + SI+
Sbjct: 300 SEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIV 359

Query: 360 IKGL-----------------------------------CQQGRLVEACGLFGQVLIRRL 384
           ++GL                                   C+ G L EA     ++    +
Sbjct: 360 VRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGV 419

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALR 439
           EP++++YSSLIDG  K GK++   ++Y  M+ +G++P+ V  + LI     NG +  A R
Sbjct: 420 EPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFR 479

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK-------------- 485
           F  + +   + PN    + L+DG CR  R  D V+   +M    IK              
Sbjct: 480 FHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRF--VMEHSGIKYSDIHSFFSNFTTE 537

Query: 486 -----PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                P+   +  LI G+   G    A  LF  M K G+  D  TY+ +I G      + 
Sbjct: 538 EEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVL 597

Query: 541 VGLHMFKLMERNGVAP 556
             + ++  M + GV P
Sbjct: 598 NAMMLYADMMKIGVKP 613



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 161/290 (55%), Gaps = 5/290 (1%)

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++V+D  V       A + +D ML  G +P+V++Y+ LI     QG + +A  ++ Q++ 
Sbjct: 147 NAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVA 206

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-LMGD---- 436
           R+++P+++TY+S+I   C+ G + D   L+D M + G++P+    ++L++G   GD    
Sbjct: 207 RQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNS 266

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A   + + +   LIPN  +F TL+DG C+ KR ++   +F  M  + + P V  +  L+ 
Sbjct: 267 AFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMD 326

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G    G    A+ L+ +M + GL PD  T S ++ GL  G  I V     + +  +GV  
Sbjct: 327 GAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNL 386

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + A YN L++   +  NL+ AL    ++T+ G+EP++++Y+++I G+  L
Sbjct: 387 NAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKL 436



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 201/450 (44%), Gaps = 60/450 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI      G + ++ E++  M  +   + P+++    ++  L +   +G   +L  A
Sbjct: 181 YNTLINACRYQGAVAKAQEMWDQM--VARQIDPNVITYTSMICVLCEEGCIGDAERLFDA 238

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G       Y  LM+G  +   + +AF ++++++  G +PN V    ++   C   +
Sbjct: 239 MKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKR 298

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +F  +   G  P V  +++L++   +    ++A  LY  M  + L PD    SI
Sbjct: 299 FSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSI 358

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++ GL   G+++     L    + G+ L+   +++++D Y   G++  A+ T  RM   G
Sbjct: 359 VVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVG 418

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL-------------- 394
             PNV+SYS LI G  + G++  A  ++ +++ + +EP+++TY++L              
Sbjct: 419 VEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAF 478

Query: 395 ---------------------IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
                                +DG C+  +++D       M   G+K             
Sbjct: 479 RFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFV--MEHSGIK------------- 523

Query: 434 MGDALRFF--FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             D   FF  F +    LIPN  I+ TL+ G     +  +  KLF  M    +  D  T+
Sbjct: 524 YSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTY 583

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           T+LIRG    G + +A++L+  M+K G+ P
Sbjct: 584 TLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 100/181 (55%), Gaps = 3/181 (1%)

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           +V +L   GL+ +AL  F    R+  +P L   N ++DG  + +R+    +LF  M    
Sbjct: 117 LVIALSQMGLLDEALYVF---RRLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRG 173

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           + P V+T+  LI     QG+++ A  ++ QM+ R + P+VITY+++I  L +   I    
Sbjct: 174 MVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAE 233

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +F  M+  G+ P+   YNVL++   +  ++++A  L+ +L + GL P+ + + T+I G+
Sbjct: 234 RLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGF 293

Query: 604 C 604
           C
Sbjct: 294 C 294


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 215/453 (47%), Gaps = 37/453 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ + + G+ DE++++   M D GI  SPD+                         
Sbjct: 263 YNALIQGFCQKGRPDEALKLLEEMKDEGI--SPDIYS----------------------- 297

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+N    +G IE+  ++ +++      P +V C  +L  L   G + +  +
Sbjct: 298 ------YSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLN 351

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
            F  L   G K +++++STLI+ F K   ++ A  L + M +  LVPD IIY  LI    
Sbjct: 352 FFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYC 411

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + G LKE  +   T L  GL+ D++  + ++D Y   G    A+   ++M +   LPN  
Sbjct: 412 RKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSY 471

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK-LRDGFSLYDN 413
           +YS++I  LC+   + +A  +   +    + PS++ Y++++DG+ K  K     + LY  
Sbjct: 472 TYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRK 531

Query: 414 MIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M K G KPD V  ++L++     G M  AL  F +     L  + F F  ++DG CR+  
Sbjct: 532 MPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGN 591

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 ++  M   N+ P+V T+T L+ G      L  A +L   M +  +TPDV TY+A
Sbjct: 592 VKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTA 651

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           +I G  + +NI     +F  M++ G  PD   Y
Sbjct: 652 LIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAY 684



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 206/430 (47%), Gaps = 6/430 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y   ++GL R G IE+A++  + +       NI   N +++  C  G+   A  L + +
Sbjct: 227 TYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEM 286

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P++ ++S L+NAFC E  +E    L   M   +  P L+  + ++ GL   G +
Sbjct: 287 KDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLV 346

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +          +G K D++ +S+++  ++   +V  A      M   G +P+ I Y  L
Sbjct: 347 NDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISL 406

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I+  C++G L EA   F  +L   L+P ++T + ++D +C  G+  +     + M  + +
Sbjct: 407 IREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNI 466

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR-LKRATDTV 473
            P++   S++IN L     +  A        +  + P++  + T+MDG  +  K      
Sbjct: 467 LPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAW 526

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           KL+  M     KPD +T TVL+   + +G +S A+ LF +M + GL+ D   ++AII G 
Sbjct: 527 KLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGY 586

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            +  N+     M+K M+RN V P++  Y  L++   K   LD A  L   +    + PD+
Sbjct: 587 CRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDV 646

Query: 594 ITYNTIICGY 603
            TY  +I GY
Sbjct: 647 KTYTALIAGY 656



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 68/132 (51%), Gaps = 6/132 (4%)

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           ++LI+  AS   L+ A  +F Q  K G+  ++ + + ++  L +G  +     +F  ++ 
Sbjct: 119 SLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKN 178

Query: 552 NGVAPDIAIYNVLLNMLIKE-----CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +G +P++  Y +++N   KE      +++ A  +  ++ ++G  P ++TY   I G C +
Sbjct: 179 SGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRV 238

Query: 607 NSCLIDGYFKSQ 618
            S + D + K Q
Sbjct: 239 GS-IEDAWNKIQ 249


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 215/456 (47%), Gaps = 36/456 (7%)

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
            L R G  + A  + R + + G VP+ V    ++  LC  G +  A++L + +LL+G   
Sbjct: 168 ALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 227

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK----------- 295
           +V TF  ++   C   ++ +A +L + MM    +P ++ Y  L+ GL +           
Sbjct: 228 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 287

Query: 296 --------------------AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
                                G+L E  EL  T   +G + D   +S +M     +G +G
Sbjct: 288 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIG 347

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            AV+    M   GF PNV++Y+I++   C+ G   +   L  ++  + L  +   Y+ +I
Sbjct: 348 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 407

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLI 450
              CK G++ +   L   M  +G  PD      ++  L  N  M +A   F   +   ++
Sbjct: 408 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 467

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
            N   +NT++    R  R  D V+L   M ++    DV+++  LI+ +   G++  +++L
Sbjct: 468 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 527

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
             +M ++G+ P+ ++Y+ +I  L K + +   L + K M   G+APDI  YN L+N L K
Sbjct: 528 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 587

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              + AAL L  +L +  + PDIITYN +I  +C +
Sbjct: 588 MGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 623



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 239/502 (47%), Gaps = 19/502 (3%)

Query: 95  GKTYNFFR--LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
            + +  +R  + RD +      +        R+G+ DE++ +   M+  G      L Q 
Sbjct: 140 ARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQT 199

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           ++  L D   V +   L   M   G       ++ ++ G+   G +  A  +  +++ +G
Sbjct: 200 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 259

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
            +P ++T   +L+ LC   Q   A ++   +    P+ NVV F+T+I     E KL +A 
Sbjct: 260 CMPGVMTYGFLLQGLCRVRQADEARAMLGRV----PELNVVLFNTVIGGCLAEGKLAEAT 315

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           +LY  M      PD   YSIL+ GL K GR+     LL     +G   +VV ++ V+ ++
Sbjct: 316 ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSF 375

Query: 329 V--GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
              G+ D  RA+   + M   G   N   Y+ +I  LC+ GR+ EA GL  ++  +   P
Sbjct: 376 CKNGMWDDTRAL--LEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP 433

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFF 441
            + +Y+++I   C + ++ +   +++N+++ G+  + +     + +LL +G   DA+R  
Sbjct: 434 DICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA 493

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + +      ++  +N L+   C+      ++ L   M    IKP+ +++ +LI  +  +
Sbjct: 494 KEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKE 553

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
             +  A+ L  QML +GL PD++TY+ +I+GL K   +   L++ + +    V PDI  Y
Sbjct: 554 RRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITY 613

Query: 562 NVLLNMLIKECNLDAALKLFGQ 583
           N+L++   K   LD A  L  +
Sbjct: 614 NILISWHCKVRLLDDAAMLLNR 635



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 174/364 (47%), Gaps = 9/364 (2%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P   TF     A C+  + ++A  L   M     VPD ++Y  +I  L   G + E   L
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L   L  G   DV  F  V+    G+G V  A +  DRM+  G +P V++Y  L++GLC+
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
             +  EA  + G+V     E +++ ++++I G    GKL +   LY+ M  +G +PDA  
Sbjct: 277 VRQADEARAMLGRV----PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 332

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            S+L++GL     +G A+R   +  +    PN+  +  ++   C+     DT  L   M 
Sbjct: 333 YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 392

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              +  +   +  +I  +   G +  A+ L  +M  +G  PD+ +Y+ II+ L   + + 
Sbjct: 393 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 452

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              HMF+ +   GV  +   YN +++ L+++     A++L  ++   G   D+++YN +I
Sbjct: 453 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 512

Query: 601 CGYC 604
              C
Sbjct: 513 KAMC 516



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 138/270 (51%), Gaps = 4/270 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++ ++ + G  D++  +   MS  G+ L+      ++  L     + +   L + MR
Sbjct: 368 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 427

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G     C Y  ++  L     +E A HM   +++ G V N +T N I+  L  +G+  
Sbjct: 428 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 487

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  L   ++L G   +VV+++ LI A CK+  ++++  L   M E  + P+ + Y+ILI
Sbjct: 488 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 547

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             L K  R+++  EL    L++GL  D+V ++++++    +G +  A+   +++ N    
Sbjct: 548 SELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVH 607

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           P++I+Y+ILI   C+   L +A  L  + +
Sbjct: 608 PDIITYNILISWHCKVRLLDDAAMLLNRAM 637



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 51/121 (42%)

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           + P   T  V  R +   G    A+ L   M + G  PD + Y  +IH L     ++   
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +   M   G A D+  ++ ++  +     +  A +L  ++  +G  P ++TY  ++ G 
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 604 C 604
           C
Sbjct: 275 C 275



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 3/111 (2%)

Query: 499 ASQGSLSSA--ILLFFQMLKRG-LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           ASQG L  A    L+ +M+ R  + P   T+      L +       L + + M R+G  
Sbjct: 132 ASQGGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCV 191

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           PD  +Y  +++ L  +  +  A  L  ++   G   D+ T++ ++ G C L
Sbjct: 192 PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGL 242


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/609 (25%), Positives = 267/609 (43%), Gaps = 80/609 (13%)

Query: 69  QLIHVLLQSDMRDVASHVFD-----KMVIQFGKTYNFFRLFR--DSLGDFGCDYSF--LI 119
           + I  L Q+  R    H+         +I+ GK      ++R    LG    DY++   I
Sbjct: 175 EAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFI 234

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG---- 175
           +   R G  +E+V++F  M + G+  +       +  L         Y+  RA+R     
Sbjct: 235 KALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWP 294

Query: 176 ----------KGFC-------------------------VYEFLMNGLLRKGVIENAFHM 200
                     +GFC                         +Y  L++   + G +  A  +
Sbjct: 295 IDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVAL 354

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
           H  ++  G   N V  + IL+ LC  G        F      G   + V ++ +++A CK
Sbjct: 355 HNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCK 414

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
             K+E+A +L N M    +  D++ Y+ LI G    G+L +   +     +RG++ D+V 
Sbjct: 415 LGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVT 474

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           ++ ++  +   G    A++  D +   G  PN  +++ +I+GLC  G++ EA     +  
Sbjct: 475 YNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA-----EAF 529

Query: 381 IRRLEPSLL-TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC-----SLLINGLM 434
           +  LE   L  YS+++DG+CK+   R  + L+  + K+G+      C     SL + G  
Sbjct: 530 LNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEY 589

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITH 491
             AL    + + + + PN  ++  L+   CR   +KRA     + +  G   I PDVIT+
Sbjct: 590 DKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERG---ITPDVITY 646

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG-------LFKGKNISVGLH 544
           T++I G      L  A  +F  M +RG+ PDVITY+ ++ G       + +    S G  
Sbjct: 647 TMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSE 706

Query: 545 MFKL--------MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             K+        M+  G+ PD+  Y VL++   K  NL  A+ L+ ++  RGL+PDI+TY
Sbjct: 707 EEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTY 766

Query: 597 NTIICGYCS 605
             ++   CS
Sbjct: 767 TALLSSCCS 775



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/536 (23%), Positives = 237/536 (44%), Gaps = 52/536 (9%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC------LVDSNSVGQYYKLCR 171
           L++ YVR+G  DE+++        G       V  +MSC      L++   +     + R
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRG------FVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 172 AMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
            ++  G       Y   +  L RKG  E A  + R++ + G  PN VTC+  ++ LC + 
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHK 276

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +          L       +   ++ +I  FC E KL++A  ++  M+   + PD  IY 
Sbjct: 277 RSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYG 336

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI    KAG L +   L    +  G+K + V+ SS++     +G     V  +    + 
Sbjct: 337 ALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDS 396

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G   + + Y+I++  LC+ G++ EA  L  ++  RR+   ++ Y++LI G+C  GKL D 
Sbjct: 397 GIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDA 456

Query: 408 FSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPN---------- 452
            ++++ M +RG++PD V  ++L+     NGL  +AL          L PN          
Sbjct: 457 KNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEG 516

Query: 453 ---------------------LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
                                L  ++ ++DG C+        +LF  +    I     + 
Sbjct: 517 LCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSC 576

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             L+  +  +G    A++L  +ML   + P+ I Y  +I    +  ++     +F ++  
Sbjct: 577 FKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVE 636

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            G+ PD+  Y +++N   +   L  A  +F  + +RG++PD+ITY  ++ G+  +N
Sbjct: 637 RGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVN 692



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/512 (23%), Positives = 237/512 (46%), Gaps = 53/512 (10%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  +  + +   G  Y  LI  Y + G + ++V +   M   GI  +  +V  ++ CL +
Sbjct: 320 FIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCE 379

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
                +     +  R  G      +Y  +++ L + G +E A  +  ++  R    ++V 
Sbjct: 380 MGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVH 439

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
              ++   C+ G++ +A ++F+ +   G +P++VT++ L+  F +    ++A +L + + 
Sbjct: 440 YTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIG 499

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
              L P+   ++ +I+GL  AG++KE    L T  D+ L+     +S+++D Y       
Sbjct: 500 TQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTR 555

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           +A + + R+   G L    S   L+  LC +G   +A  L  ++L   +EP+ + Y  LI
Sbjct: 556 KAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLI 615

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
             FC+ G ++    ++D +++RG+ PD +  +++ING                       
Sbjct: 616 GAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGY---------------------- 653

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA------------SQGS 503
                   CR+    +   +F  M    IKPDVIT+TV++ G +            S+GS
Sbjct: 654 --------CRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGS 705

Query: 504 LSS---AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
                 A   + +M + G+ PDV+ Y+ +I    K  N+   ++++  M   G+ PDI  
Sbjct: 706 EEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVT 765

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           Y  LL+      ++D A+ L  +++ +G+EPD
Sbjct: 766 YTALLSSCCSRGDMDRAITLVNEMSFKGIEPD 797



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 209/449 (46%), Gaps = 28/449 (6%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S +++    +G   E V+ F    D GI+L   L   ++  L     V +  +L   M+G
Sbjct: 371 SSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKG 430

Query: 176 KGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +   +    Y  L+ G   +G + +A +M  ++ +RG  P+IVT N ++     NG    
Sbjct: 431 RRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKE 490

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L D +   G KPN  T + +I   C   K+++A    N + +  L      YS ++D
Sbjct: 491 ALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN----YSAMVD 546

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G  KA   ++  EL      +G+ +       ++ +    G+  +A+   +RML     P
Sbjct: 547 GYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEP 606

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N I Y  LI   C+ G +  A  +F  ++ R + P ++TY+ +I+G+C+   LR+   ++
Sbjct: 607 NQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIF 666

Query: 412 DNMIKRGLKPDAVVCSLLINGLMG--------------------DALRFFFQSVRMTLIP 451
           ++M +RG+KPD +  +++++G                       DA  F+ +   M + P
Sbjct: 667 NDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKP 726

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           ++  +  L+D  C+     D + L+  M    ++PD++T+T L+    S+G +  AI L 
Sbjct: 727 DVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLV 786

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
            +M  +G+ PD    S +  G+ K + + 
Sbjct: 787 NEMSFKGIEPDSRAMSVLHRGILKARKVQ 815



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 171/335 (51%), Gaps = 15/335 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+  + R G   E++E+   +   G+  +     R++  L  +  V +       + 
Sbjct: 475 YNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE 534

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
            K    Y  +++G  +      A+ +  ++ ++G +    +C K+L  LC+ G+   A  
Sbjct: 535 DKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALI 594

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +L +  +PN + +  LI AFC++  +++A  ++++++E  + PD+I Y+++I+G  
Sbjct: 595 LLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYC 654

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG-DVGRAVQ-------------- 339
           +   L+E  ++     +RG+K DV+ ++ V+D +  +   + R++Q              
Sbjct: 655 RVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASP 714

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            +  M   G  P+V+ Y++LI   C+   L +A  L+ +++ R L+P ++TY++L+   C
Sbjct: 715 FWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCC 774

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
             G +    +L + M  +G++PD+   S+L  G++
Sbjct: 775 SRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGIL 809



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 179/391 (45%), Gaps = 23/391 (5%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A S F  L   G + NV T++ LI   C+  +LE+  Q  +L+ E+    + ++    I 
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCR-WRLERKLQ--SLLSEIVGSKESVL-GFDIT 135

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            LF   R   G      +    L LD++V      AYV +G    A+    +    GF+P
Sbjct: 136 ALFDVLREGGGEVEGEHSSVLILVLDMLV-----KAYVRVGMFDEAIDALFQTKRRGFVP 190

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +++S + L+  L + G++  A  ++  +    L P+  TY   I   C+ G   +   ++
Sbjct: 191 HIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVF 250

Query: 412 DNMIKRGLKPDAVVCSLLINGLMG--------DALRFFFQSVRMTLIP-NLFIFNTLMDG 462
             M + G+ P+AV CS  I GL          +ALR    ++R    P + F +  ++ G
Sbjct: 251 REMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALR----ALRAANWPIDTFAYTAVIRG 306

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C   +  +   +F+ M    I PD   +  LI      G+L  A+ L   M+  G+  +
Sbjct: 307 FCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTN 366

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            +  S+I+  L +    S  +  FK    +G+  D  +YN++++ L K   ++ A++L  
Sbjct: 367 CVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLN 426

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
           ++  R +  D++ Y T+I GYC L   L+D 
Sbjct: 427 EMKGRRMSLDVVHYTTLIAGYC-LQGKLVDA 456


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 143/554 (25%), Positives = 264/554 (47%), Gaps = 20/554 (3%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRD------SLGDFGCDYSFLIENYV 123
           + H+L  + M   A+ V  +MV+       F  L+          G F   +S LI+   
Sbjct: 16  VAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLID--- 72

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FC 179
            +G ++E+++ F+ M    ++        L+             +  + M G G      
Sbjct: 73  -LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVF 131

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++ + ++G +E A  +  ++  RG VP+ VT N ++      G++ +    F+ +
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 191

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             +  +P+V+T++ LIN FCK  KL    + Y  M    L P+++ YS L+D   K G +
Sbjct: 192 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 251

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           ++  +  +     GL  +   ++S++DA   IG++  A +  + ML  G   NV++Y+ L
Sbjct: 252 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 311

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC   R+ EA  LFG++    + P+L +Y++LI GF K+  +     L + +  RG+
Sbjct: 312 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 371

Query: 420 KPDAVVCSLLINGLMG----DALRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVK 474
           KPD ++    I GL      +A +     ++   I  N  I+ TLMD   +    T+ + 
Sbjct: 372 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 431

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR-GLTPDVITYSAIIHGL 533
           L   M   +I+  V+T  VLI G+     +S A+  F ++    GL  +   ++A+I GL
Sbjct: 432 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 491

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K   +     +F+ M + G+ PD   Y  L++   K+ N+  AL L  ++ + G++ D+
Sbjct: 492 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 551

Query: 594 ITYNTIICGYCSLN 607
           + Y +++ G    N
Sbjct: 552 LAYTSLVWGLSHCN 565



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/577 (23%), Positives = 255/577 (44%), Gaps = 29/577 (5%)

Query: 32  FNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA---QLIHVLLQSDMRDVASHVFD 88
           +  AN++L  ++ +           W+   V  P       L  VL+   M + A   F 
Sbjct: 26  YYDANSVLKEMVLSKADCDVFDVL-WSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFS 84

Query: 89  KMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           KM     K +  F   R   G        L+  + ++GK D+    F  M   G   +  
Sbjct: 85  KM-----KRFRVFPKTRSCNG--------LLHRFAKLGKTDDVKRFFKDMIGAGARPTVF 131

Query: 149 LVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQV 204
               ++ C+     V     L   M+ +G       Y  +++G  + G +++      ++
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 191

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
                 P+++T N ++   C  G++      +  +   G KPNVV++STL++AFCKE  +
Sbjct: 192 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 251

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           ++A + Y  M  + LVP+   Y+ LID   K G L +   L    L  G++ +VV ++++
Sbjct: 252 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 311

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D       +  A + + +M   G +PN+ SY+ LI G  +   +  A  L  ++  R +
Sbjct: 312 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 371

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALR 439
           +P LL Y + I G C   K+     + + M + G+K ++++ + L++     G   + L 
Sbjct: 372 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 431

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF-MLMGMYNIKPDVITHTVLIRGI 498
              +   + +   +  F  L+DG C+ K  +  V  F  +   + ++ +    T +I G+
Sbjct: 432 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 491

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                + +A  LF QM+++GL PD   Y++++ G FK  N+   L +   M   G+  D+
Sbjct: 492 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 551

Query: 559 AIYNVLLNMLIKECN-LDAALKLFGQLTDRGLEPDII 594
             Y  L+  L   CN L  A     ++   G+ PD +
Sbjct: 552 LAYTSLVWGL-SHCNQLQKARSFLEEMIGEGIHPDEV 587



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 156/324 (48%), Gaps = 19/324 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   +IG + ++  +   M  +G+  +      L+  L D+  + +  +L   M 
Sbjct: 273 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 332

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++G ++   ++ A  +  ++  RG  P+++     +  LC   +I 
Sbjct: 333 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 392

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + + +   G K N + ++TL++A+ K     +   L + M E+D+   ++ + +LI
Sbjct: 393 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 452

Query: 291 DGLFKAGRLKEGNELLLTALDR--------GLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           DGL K       N+L+  A+D         GL+ +  +F++++D       V  A   ++
Sbjct: 453 DGLCK-------NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 505

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           +M+  G +P+  +Y+ L+ G  +QG ++EA  L  ++    ++  LL Y+SL+ G     
Sbjct: 506 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCN 565

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVC 426
           +L+   S  + MI  G+ PD V+C
Sbjct: 566 QLQKARSFLEEMIGEGIHPDEVLC 589



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 10/255 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  +V+   +D ++E+   +   GI   PDL+     +  L     +     +   
Sbjct: 343 YNALIHGFVKAKNMDRALELLNELKGRGI--KPDLLLYGTFIWGLCSLEKIEAAKVVMNE 400

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G      +Y  LM+   + G      H+  ++ +      +VT   ++  LC N  
Sbjct: 401 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 460

Query: 229 IGNASSLFDVLL-LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +  A   F+ +    G + N   F+ +I+  CK+ ++E A  L+  M++  LVPD   Y+
Sbjct: 461 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 520

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+DG FK G + E   L     + G+KLD++ ++S++        + +A    + M+  
Sbjct: 521 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 580

Query: 348 GFLPN-VISYSILIK 361
           G  P+ V+  S+L K
Sbjct: 581 GIHPDEVLCISVLKK 595



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/310 (21%), Positives = 137/310 (44%), Gaps = 5/310 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+      ++ E+ E+F  M   G+  +      L+   V + ++ +  +L   ++
Sbjct: 308 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 367

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G+G      +Y   + GL     IE A  +  ++ + G   N +    ++     +G   
Sbjct: 368 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 427

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN-LMMEMDLVPDLIIYSIL 289
               L D +  +  +  VVTF  LI+  CK   + KA   +N +  +  L  +  I++ +
Sbjct: 428 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 487

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           IDGL K  +++    L    + +GL  D   ++S+MD     G+V  A+   D+M   G 
Sbjct: 488 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 547

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             ++++Y+ L+ GL    +L +A     +++   + P  +   S++    + G + +   
Sbjct: 548 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 607

Query: 410 LYDNMIKRGL 419
           L   ++K  L
Sbjct: 608 LQSYLMKHQL 617


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 230/505 (45%), Gaps = 19/505 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK----LC 170
           YS  I    ++ +  E+V +   M   G+   P+++  + S  + +   G  ++    L 
Sbjct: 224 YSSAIAACAKVSRWKEAVGLLRSMKGQGV--KPNVI--VYSAAISACRKGGQWETAVDLL 279

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           + M   G       Y  +++   ++G  E AF +  ++  +G V NI+T + ++      
Sbjct: 280 KEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKW 339

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           GQ   A +L   +   G  P+V+T+S+ I+A  K+ + E+A  L   M    + P+ I Y
Sbjct: 340 GQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISY 399

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            I+I    K GR +E  +LL      G+  DV+ +S+ +DA        +A+     M  
Sbjct: 400 GIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPA 459

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  PNVISY+  I    + GR   A  L  ++    L P ++TYS++I       +  +
Sbjct: 460 TGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEE 519

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
              L+  M ++G+ PD V C+  IN     G   +AL    +   M L+P+   + T +D
Sbjct: 520 ALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAID 579

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
            C +  R  + + L   M    + PD I++   +   +  G    A++L   ML  GL+P
Sbjct: 580 ACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSP 639

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           DV+TY++ I+   KG        + + M   G+APD+  +N  ++          A+++ 
Sbjct: 640 DVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVL 699

Query: 582 GQLTDRGLEPDIITYNTII--CGYC 604
            ++   G+ P+  TY T +  C  C
Sbjct: 700 FEMRALGVSPNEATYLTAMYACKRC 724



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 179/378 (47%), Gaps = 5/378 (1%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           Q   A  L   +   G  P+V+T+S+ I A  K ++ ++A  L   M    + P++I+YS
Sbjct: 201 QWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYS 260

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
             I    K G+ +   +LL      GL  DV+ +S+V+DA    G    A +    M   
Sbjct: 261 AAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTK 320

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G + N+I+YSI+I    + G+  EA  L  ++    + P ++TYSS I    K G+  + 
Sbjct: 321 GVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEA 380

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L   M   G+ P+A+   ++I+     G   +A+    +     + P++  ++  +D 
Sbjct: 381 VGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDA 440

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           C +  R    + L   M    + P+VI++   I   A  G    A+ L  +M   GL PD
Sbjct: 441 CAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPD 500

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           VITYSA+I     G+     L +F+ M+R G+ PD+   N  +N   +    + AL + G
Sbjct: 501 VITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLG 560

Query: 583 QLTDRGLEPDIITYNTII 600
           ++   GL PD I+Y T I
Sbjct: 561 EMPTMGLVPDAISYRTAI 578



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 11/260 (4%)

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           Q G   +A  +  ++  + ++P    YSS I     + +      L  +M  RG  PD +
Sbjct: 163 QYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVL 222

Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             S  I          +A+          + PN+ +++  +  C +  +    V L   M
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM 282

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               + PDVIT++ +I   A +G    A  L  +M  +G+  ++ITYS +I    K    
Sbjct: 283 PAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQW 342

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              + + + M+ NGVAPD+  Y+  ++   K+   + A+ L  ++   G+ P+ I+Y  +
Sbjct: 343 EEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIV 402

Query: 600 ICGYCSLNSCLIDGYFKSQI 619
           I      ++C   G ++  I
Sbjct: 403 I------SACAKRGRWREAI 416


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 187/368 (50%), Gaps = 10/368 (2%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDV-LLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           G   N  T + IL+ LC  G++  A   FD  L L   +P+VV+++TLIN  CK  +++ 
Sbjct: 5   GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64

Query: 267 AFQLYNLMMEM-DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           AF L+  M+      P+   Y+ L+DGL K  RL     ++  A  R    DVV ++++M
Sbjct: 65  AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
            A   +G V  A+ T+ +M   G++P ++S++ +I GLC+  RL +A  +F +++ R   
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRF 440
           P+L+TYS +IDG CKS +L +   L D M+  G +PD V  + L+      G +  AL  
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 244

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             + V    IP++  +  ++D  C++ R  D  ++F  +      P+V+T++ LI G   
Sbjct: 245 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR 304

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
              +     +  +M  R   P+V+TY+ +I GL           MF+ M   G  PD   
Sbjct: 305 ASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDART 361

Query: 561 YNVLLNML 568
           Y  L   L
Sbjct: 362 YRGLKRAL 369



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 194/390 (49%), Gaps = 41/390 (10%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           S +++   R G++ +++E F    ++  +  PD+V    L++ L     V   + L R M
Sbjct: 14  SIILQGLCRCGRVAQALEHFDASLELA-HAQPDVVSYTTLINGLCKLGRVDAAFDLFRKM 72

Query: 174 RGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
              G C      Y  L++GL ++  ++ A  +  +  +R F P++VT N ++  L   G+
Sbjct: 73  VAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGR 132

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A + F  +   G  P +V+F+ +I   C+  +L  A +++N M++ D  P+L+ YS+
Sbjct: 133 VDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSV 192

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +IDGL K+ +L E  +LL   +  G + D+V ++ ++  +   G +  A+    RM++ G
Sbjct: 193 VIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG 252

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            +P+V++Y+++I  LC+ GR+ +A  +F +++  +  P+++TYS+LI G+C++ ++ +G 
Sbjct: 253 CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGG 312

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            +   M  R                                 PN+  +NT++ G   + R
Sbjct: 313 KVMREMACR---------------------------------PNVVTYNTMIWGLSMVDR 339

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             +   +F  M      PD  T+  L R +
Sbjct: 340 NEEAYGMFREMSECGFVPDARTYRGLKRAL 369



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 169/323 (52%), Gaps = 10/323 (3%)

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           SI++ GL + GR+ +  E    +L+    + DVV ++++++    +G V  A   + +M+
Sbjct: 14  SIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMV 73

Query: 346 N-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
             GG  PN  +Y+ L+ GLC+Q RL  A  +  +   R   P ++TY++L+    + G++
Sbjct: 74  AAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRV 133

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
            +  + +  M + G  P  V  + +I GL     + DAL  F + +     PNL  ++ +
Sbjct: 134 DEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVV 193

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG C+  +  +  +L   M     +PD++ +T L+ G ++ G L SA+ L  +M+ +G 
Sbjct: 194 IDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGC 253

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PDV+TY+ +I  L K   +     +F+ +  N  +P++  Y+ L+    +   +D   K
Sbjct: 254 IPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGK 313

Query: 580 LFGQLTDRGLEPDIITYNTIICG 602
           +  ++  R   P+++TYNT+I G
Sbjct: 314 VMREMACR---PNVVTYNTMIWG 333



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 151/299 (50%), Gaps = 7/299 (2%)

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVE 371
           G++ +    S ++      G V +A++ +D  L      P+V+SY+ LI GLC+ GR+  
Sbjct: 5   GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64

Query: 372 ACGLFGQ-VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           A  LF + V      P+  TY++L+DG CK  +L    ++     KR   PD V  + L+
Sbjct: 65  AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124

Query: 431 N-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
                 G + +AL  F Q      +P L  FN ++ G CR +R  D +++F  M   +  
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P+++T++V+I G+     L  A  L  +M+  G  PD++ Y+ ++ G      +   L +
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 244

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            + M   G  PD+  Y V+++ L K   +D A ++F +L      P+++TY+ +I GYC
Sbjct: 245 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC 303



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 7/266 (2%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVL-IRRLEPSLLTYSSLIDGFCKSGKLRD 406
           G   N  + SI+++GLC+ GR+ +A   F   L +   +P +++Y++LI+G CK G++  
Sbjct: 5   GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64

Query: 407 GFSLYDNMIKRG-LKPDAVVCSLLINGLMG----DALRFFFQSVR-MTLIPNLFIFNTLM 460
            F L+  M+  G  +P+A   + L++GL      DA R      R     P++  +NTLM
Sbjct: 65  AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
               +L R  + +  F  M      P +++   +I G+     L+ A+ +F +M+ R   
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P+++TYS +I GL K   +     +   M   G  PD+  Y  L+        LD+AL L
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 244

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSL 606
             ++  +G  PD++TY  +I   C +
Sbjct: 245 LRRMVSQGCIPDVVTYTVVIDKLCKV 270



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 144/313 (46%), Gaps = 16/313 (5%)

Query: 93  QFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           + G+    F LFR  +   GC      Y+ L++   +  ++D +  + A         +P
Sbjct: 58  KLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRD--FAP 115

Query: 148 DLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMH 201
           D+V    LM+ L     V +       M  +G+      +  ++ GL R   + +A  + 
Sbjct: 116 DVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVF 175

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            ++I R F PN+VT + ++  LC + Q+  A  L D ++  G +P++V ++ L+  F   
Sbjct: 176 NEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAA 235

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            +L+ A  L   M+    +PD++ Y+++ID L K GR+ + +E+    +      +VV +
Sbjct: 236 GRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTY 295

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           S+++  Y     V    +    M      PNV++Y+ +I GL    R  EA G+F ++  
Sbjct: 296 SALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSE 352

Query: 382 RRLEPSLLTYSSL 394
               P   TY  L
Sbjct: 353 CGFVPDARTYRGL 365



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 64/281 (22%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           NAI+  L +      A++ F    +    PN+     +I  L +SD  D A  + D+MV 
Sbjct: 156 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 215

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           +                  GC      Y+ L+  +   G++D ++ +   M   G    P
Sbjct: 216 E------------------GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCI--P 255

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           D+V                              Y  +++ L + G +++A  + R+++  
Sbjct: 256 DVV-----------------------------TYTVVIDKLCKVGRVDDAHEIFRELVAN 286

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
              PN+VT + ++   C   ++        V+  +  +PNVVT++T+I       + E+A
Sbjct: 287 KCSPNVVTYSALIGGYCRASRVDEGGK---VMREMACRPNVVTYNTMIWGLSMVDRNEEA 343

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           + ++  M E   VPD   Y     GL +A R+ +    +LT
Sbjct: 344 YGMFREMSECGFVPDARTYR----GLKRALRMIDHPPHVLT 380


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 226/525 (43%), Gaps = 63/525 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    ++G+  E++ +F  M++     +      L+  L + ++     K+   M 
Sbjct: 312 YTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGML 371

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG       Y  L++G  +KG+  +A  +   +      PN  T N+++   C    I 
Sbjct: 372 EKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIH 431

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A SL   +L    +PNVVT++ LI+  CKE  L  A++L +LM E  LVPD   YS+ I
Sbjct: 432 KAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFI 491

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D L K G ++E   L  +  ++G+K + V++S+++D Y  +G V       D+ML+ G +
Sbjct: 492 DTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCV 551

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN I+Y+ LI G C++    EA  L   ++ R +EP+  TY+ LID   K  +      +
Sbjct: 552 PNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDM 611

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +D M+  G  PD                              +FI+   +   C   R  
Sbjct: 612 FDQMLSTGSHPD------------------------------VFIYTAFIHAYCSHGRLK 641

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D   L   M    I PD + +T+ I      GS+  A  +  +M + G  P   TYS +I
Sbjct: 642 DAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLI 701

Query: 531 HGLFKGKNISV-----------------------------GLHMFKLMERNGVAPDIAIY 561
             L   K   V                              L +F  M  +G AP+   Y
Sbjct: 702 KHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTY 761

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              +  L K   L+ A +LF  + ++G  P+   YN+++   C L
Sbjct: 762 GKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQL 806



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 206/427 (48%), Gaps = 5/427 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++NG  + G +  A     +++Q G   +  T   ++   C N  +  A+++F  +   G
Sbjct: 210 MVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG 269

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
              N V+++ LI+ FC+  ++++A +L++ M E +  P +  Y+++I  L + GR  E  
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL 329

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +     ++  + +V  ++ ++ +     +   A +  + ML  G +P+V++Y+ LI G 
Sbjct: 330 NMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGY 389

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G    A  +   +      P+  TY+ LI GFC+   +    SL   M++R L+P+ 
Sbjct: 390 CKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNV 449

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  ++LI+G      +G A +         L+P+ + ++  +D  C+     +   LF  
Sbjct: 450 VTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFES 509

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +    IK + + ++ LI G    G +S    L  +ML  G  P+ ITY+++I G  K KN
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
                 +  +M +  + P    Y +L++ L+K+   D A  +F Q+   G  PD+  Y  
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA 629

Query: 599 IICGYCS 605
            I  YCS
Sbjct: 630 FIHAYCS 636



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 208/442 (47%), Gaps = 9/442 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+ G  R   ++ A  +   +  +G + N V+   ++   C   ++  A  LF  +
Sbjct: 241 TYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQM 300

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P V T++ +I A C+  +  +A  ++  M E    P++  Y++LI  L +    
Sbjct: 301 HEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNF 360

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +  ++L   L++GL   VV +++++D Y   G    A++    M +    PN  +Y+ L
Sbjct: 361 DDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNEL 420

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+   + +A  L  ++L R+L+P+++TY+ LI G CK G L   + L   M + GL
Sbjct: 421 ILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGL 480

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDTV 473
            PD    S+ I+     GL+ +A R  F+S++   I  N  I++TL+DG C++ + +D  
Sbjct: 481 VPDEWTYSVFIDTLCKRGLVEEA-RSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGR 539

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M      P+ IT+  LI G   + +   A LL   M+KR + P   TY+ +I  L
Sbjct: 540 FLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNL 599

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K         MF  M   G  PD+ IY   ++       L  A  L  ++  +G+ PD 
Sbjct: 600 LKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDT 659

Query: 594 ITYNTIICGYCSLNSCLIDGYF 615
           + Y   I  Y    S  IDG F
Sbjct: 660 MLYTLFIDAYGRFGS--IDGAF 679



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 181/352 (51%), Gaps = 6/352 (1%)

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            +Y  M++  + P++   + +++G  K G + E    +   +  GL LD   ++S++  Y
Sbjct: 190 SVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGY 249

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
               +V  A   +  M N G L N +SY+ LI G C+  R+ EA  LF Q+      P++
Sbjct: 250 CRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTV 309

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA-----VVCSLLINGLMGDALRFFFQ 443
            TY+ +I   C+ G+  +  +++  M ++  +P+      ++CSL  +    DA +    
Sbjct: 310 RTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNG 369

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
            +   LIP++  +N L+DG C+   +   +++  LM   N  P+  T+  LI G     +
Sbjct: 370 MLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKN 429

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A+ L  +ML+R L P+V+TY+ +IHG  K  ++     +  LM  +G+ PD   Y+V
Sbjct: 430 IHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSV 489

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
            ++ L K   ++ A  LF  L ++G++ + + Y+T+I GYC +   + DG F
Sbjct: 490 FIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGK-VSDGRF 540



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 114/492 (23%), Positives = 208/492 (42%), Gaps = 42/492 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  + R   I +++ +   M +    L P++V    L+        +G  YKL   
Sbjct: 417 YNELILGFCRGKNIHKAMSLLHKMLERK--LQPNVVTYNILIHGQCKEGDLGSAYKLLSL 474

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y   ++ L ++G++E A  +   + ++G   N V  + ++   C  G+
Sbjct: 475 MNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGK 534

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +   L D +L  G  PN +T+++LI+ +CKE   ++A  L ++M++ D+ P    Y+I
Sbjct: 535 VSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTI 594

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LID L K     + +++    L  G   DV ++++ + AY   G +  A     +M   G
Sbjct: 595 LIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKG 654

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS------- 401
            +P+ + Y++ I    + G +  A G+  ++     EPS  TYS LI     +       
Sbjct: 655 IMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSS 714

Query: 402 ---------GKLRDGFS-------------LYDNMIKRGLKPDAVVCSLLINGL-----M 434
                    G   + FS             L+  M + G  P+A      I GL     +
Sbjct: 715 SSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCL 774

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A R F         PN  I+N+L+   C+L    + ++   +M      P + +  +L
Sbjct: 775 EVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLL 834

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           + G+  +G+   A  +F   L+     D + +  +I GL K         +F +ME  G 
Sbjct: 835 LCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGC 894

Query: 555 APDIAIYNVLLN 566
                 Y++L+ 
Sbjct: 895 QIHPKTYSMLIE 906



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 190/459 (41%), Gaps = 42/459 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI    + G +  + ++ + M++ G+          +  L     V +   L  +++
Sbjct: 452 YNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLK 511

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG      +Y  L++G  + G + +   +  +++  G VPN +T N ++   C      
Sbjct: 512 EKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFK 571

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  L D+++    +P   T++ LI+   K+ + ++A  +++ M+     PD+ IY+  I
Sbjct: 572 EARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFI 631

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
                 GRLK+   L+     +G+  D ++++  +DAY   G +  A     RM   G  
Sbjct: 632 HAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCE 691

Query: 351 PNVISYSILIKGLCQQ--------------------------GRLVE---ACGLFGQVLI 381
           P+  +YS LIK L                              R V+      LFG++  
Sbjct: 692 PSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAE 751

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGD 436
               P+  TY   I G CK G L     L+D+M ++G  P+  + + L+      GL G+
Sbjct: 752 HGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGE 811

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF--MLMGMYNIKPDVITHTVL 494
           A+R+    +    +P+L     L+ G           ++F   L   YN   D +   VL
Sbjct: 812 AIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNY--DEMVWKVL 869

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           I G+  +G       LF  M  +G      TYS +I G 
Sbjct: 870 IDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 10/325 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+N ++  + D++ ++F  M   G +    +    +        +     L   M 
Sbjct: 592 YTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMN 651

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            KG      +Y   ++   R G I+ AF + +++ + G  P+  T + ++K L       
Sbjct: 652 AKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL------S 705

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA              +    S   +   +    E    L+  M E    P+   Y   I
Sbjct: 706 NAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFI 765

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K G L+  + L     ++G   +  +++S++     +G  G A++  D M+    L
Sbjct: 766 TGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHL 825

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++ S  +L+ GL  +G   +A  +F   L        + +  LIDG  K G       L
Sbjct: 826 PHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDL 885

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG 435
           +  M  +G +      S+LI G  G
Sbjct: 886 FGIMETQGCQIHPKTYSMLIEGFDG 910



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 73/155 (47%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y   + GL + G +E A  +   + ++G  PN    N +L   C  G  G A    D++
Sbjct: 760 TYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIM 819

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +     P++ +   L+     E   EKA +++   ++ +   D +++ +LIDGL K G  
Sbjct: 820 IENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLS 879

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            + ++L      +G ++    +S +++ + GI ++
Sbjct: 880 DKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEI 914


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 218/415 (52%), Gaps = 5/415 (1%)

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           ++AF +  +++Q   +P+IV   ++L  +    +      L+  +  +G   ++ +F+ L
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I+ FC+ ++L  A  L   MM++   P ++    L++G  +  R +E   L+ +    G 
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             +VV++++V++      D+  A++ +  M   G   + ++Y+ LI GL   GR  +A  
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           L   ++ R+++P+++ +++LID F K G L +  +LY  MI+R + P+    + LING  
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               +GDA   F   V     P++  +NTL+ G C+ KR  D +KLF  M    +  D  
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+  LI G    G L+ A  +F +M+  G++PD++TY+ ++  L     I   L M + +
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +++ +  DI  YN+++  L +   L  A  LF  LT +G++PD I Y T+I G C
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 206/410 (50%), Gaps = 31/410 (7%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++++ GF P+IVT   +L   C   +   A SL D +   G  PNVV ++T+IN  CK  
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L  A +++  M +  +  D + Y+ LI GL  +GR  +   LL   + R +  +V+ F+
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++D +V  G++  A   Y  M+    +PNV +Y+ LI G C  G L +A  +F  ++ +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
              P ++TY++LI GFCKS ++ DG  L+              C +   GL+GDA     
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLF--------------CEMTYQGLVGDA----- 359

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                      F +NTL+ G C+  +     K+F  M    + PD++T+ +L+  + + G
Sbjct: 360 -----------FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A+++   + K  +  D+ITY+ II GL +   +     +F+ + R GV PD   Y 
Sbjct: 409 KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 468

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN-TIICGYCSLNSCLI 611
            +++ L ++     A KL  ++ + G  P    Y+ T+   Y SL++ LI
Sbjct: 469 TMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELI 518



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 192/382 (50%), Gaps = 5/382 (1%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +  +A SLF  +L   P P++V F+ ++    K  K +    LY+ M  + +  DL  ++
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           ILI    +  RL     LL   +  G +  +V   S+++ +        AV   D M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           GF+PNV+ Y+ +I GLC+   L  A  +F  +  + +    +TY++LI G   SG+  D 
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L  +M+KR + P+ +  + LI+     G + +A   + + +R +++PN+F +N+L++G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C      D   +F LM      PDV+T+  LI G      +   + LF +M  +GL  D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
             TY+ +IHG  +   ++V   +F  M   GV+PDI  YN+LL+ L     ++ AL +  
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 583 QLTDRGLEPDIITYNTIICGYC 604
            L    ++ DIITYN II G C
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLC 440



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 173/348 (49%), Gaps = 5/348 (1%)

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           K + AF L+  M++   +P ++ ++ ++  + K  +      L     + G+  D+  F+
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            ++  +     +  A+    +M+  GF P++++   L+ G CQ  R  EA  L   +   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DA 437
              P+++ Y+++I+G CK+  L +   ++  M K+G++ DAV  + LI+GL       DA
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            R     V+  + PN+  F  L+D   +     +   L+  M   ++ P+V T+  LI G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
               G L  A  +F  M+ +G  PDV+TY+ +I G  K K +  G+ +F  M   G+  D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
              YN L++   +   L+ A K+F ++ D G+ PDI+TYN ++   C+
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 169/325 (52%), Gaps = 9/325 (2%)

Query: 106 DSLGDFGCDYSFLIENYVRIG-----KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           DS+  FG   + +I N V  G      ++ ++E+F  M   GI         L+S L +S
Sbjct: 173 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 232

Query: 161 NSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
                  +L R M  +        +  L++  +++G +  A ++++++I+R  VPN+ T 
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++   CI+G +G+A  +FD+++  G  P+VVT++TLI  FCK  ++E   +L+  M  
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             LV D   Y+ LI G  +AG+L    ++    +D G+  D+V ++ ++D     G + +
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+   + +       ++I+Y+I+I+GLC+  +L EA  LF  +  + ++P  + Y ++I 
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C+ G  R+   L   M + G  P
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGFMP 497



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 174/340 (51%), Gaps = 8/340 (2%)

Query: 104 FRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV 163
           FR S+   G     L+  + +  +  E+V +   M   G   +  +   +++ L  +  +
Sbjct: 145 FRPSIVTLGS----LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 200

Query: 164 GQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
               ++   M  KG       Y  L++GL   G   +A  + R +++R   PN++    +
Sbjct: 201 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +      G +  A +L+  ++     PNV T+++LIN FC    L  A  +++LM+    
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            PD++ Y+ LI G  K+ R+++G +L      +GL  D   +++++  Y   G +  A +
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            ++RM++ G  P++++Y+IL+  LC  G++ +A  +   +    ++  ++TY+ +I G C
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR 439
           ++ KL++ + L+ ++ ++G+KPDA+    +I+GL    L+
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480



 Score = 42.4 bits (98), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 53/104 (50%)

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
              A  LF +ML+    P ++ ++ ++  + K     + ++++  ME  G++ D+  + +
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           L++   +   L  AL L G++   G  P I+T  +++ G+C  N
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN 163


>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
          Length = 665

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 229/495 (46%), Gaps = 40/495 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS---NSVGQYYKLCR 171
           Y  L+  Y R GK D  +E F  M   G         R +  ++ +   + V +YY +  
Sbjct: 163 YRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMAL 222

Query: 172 AMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           A   KGFC+    Y   +  L +   IE    +   + + G  P+   CN  +  LC + 
Sbjct: 223 A---KGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHN 279

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ +A  + + + + G  P+VVT++T+++  C   +  +A  L+  M+   L PD++   
Sbjct: 280 RLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACG 339

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL K  ++ E  EL    L   ++L+V ++++++  +   G + +A +T   M   
Sbjct: 340 ALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRN 399

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V++Y+IL+   C  G   +A  L  ++ +  + P   +Y+ L+ G CK+ +L   
Sbjct: 400 GCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKA 459

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           F+   + ++ G   D V C++LI                              D  CR K
Sbjct: 460 FAFVSDHMEVGGFCDIVSCNILI------------------------------DAFCRAK 489

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +    + LF  MG   I+ D +T+ +LI G+   G  + A  LF QML   + P+V  Y+
Sbjct: 490 KVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYN 549

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++H L K  +      +F  M +  V+PD   +N L+  L K      AL LF ++  +
Sbjct: 550 IMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTK 609

Query: 588 GLEPDIITYNTIICG 602
           G+EPD +T+  II G
Sbjct: 610 GVEPDNLTFRYIISG 624



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 227/468 (48%), Gaps = 9/468 (1%)

Query: 110 DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           +FG DY+  I   ++    D   + +      G  L+P    R ++ L  SN +    +L
Sbjct: 193 EFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEEL 252

Query: 170 CRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
              M   G    F      ++ L     + +A  M  ++  +G  P++VT   ++  LC 
Sbjct: 253 LTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCD 312

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           + +   A  L++ ++  G KP+VV    LI   CK  K+++AF+L + M+ +D+  ++ I
Sbjct: 313 HRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSI 372

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LI G ++AG +++  + +      G + DVV ++ +++ Y  IG   +A     +M 
Sbjct: 373 YNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKME 432

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  P+  SY+IL+KGLC+  +L +A       +       +++ + LID FC++ K+ 
Sbjct: 433 MSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVN 492

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLM 460
              +L+  M  +G++ DAV   +LINGL G      A   F Q +   ++PN+ ++N ++
Sbjct: 493 SALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIML 552

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
              C++       K+F  M    + PD +T   LI  +        A+ LF +M  +G+ 
Sbjct: 553 HNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVE 612

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           PD +T+  II GL      ++   +++ M  NG+  D  +   L+++L
Sbjct: 613 PDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILDRDVSERLISVL 660



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 121/545 (22%), Positives = 240/545 (44%), Gaps = 55/545 (10%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            LFR    +  C    +I   +  G+  ESVE+   +  + + L P +V +++  L+DS 
Sbjct: 52  ELFRPVRTETSC---VIIGRALECGRWSESVEL--ELEGLHVELDPFVVNKVLRGLLDSG 106

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
              ++Y    A    GF    F +  ++    +++ F +  + + R      V  ++ L 
Sbjct: 107 MAVRFYWW--AESRPGFYHNNFAIAYIISLLFVDDNFALLSEFLGR-VRSQGVAFHRSLY 163

Query: 222 RLCING--QIGNASSL---FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           R+ + G  + G   S+   FD ++  G +   V ++  I    K    +   + YN+ + 
Sbjct: 164 RVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMALA 223

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGDVG 335
                    YS  I  L ++ R+ E  E LLT +D+ G   D    +  +    G   + 
Sbjct: 224 KGFCLTPFTYSRWITALCQSNRI-ELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLY 282

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A+Q  ++M   G  P+V++Y+ ++  LC   R  EA GL+ +++ R L+P ++   +LI
Sbjct: 283 DALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALI 342

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-GDALRFFFQSV----RMTLI 450
            G CK+ K+ + F L   M+   ++ +  + + LI+G     ++   +++V    R    
Sbjct: 343 FGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCE 402

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P++  +N L++  C +        L   M M  + PD  ++ +L++G+     L  A   
Sbjct: 403 PDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAF 462

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG----------------- 553
               ++ G   D+++ + +I    + K ++  L++FK M   G                 
Sbjct: 463 VSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFG 522

Query: 554 ------------------VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
                             + P++ +YN++L+ L K  +   A K+F Q+T + + PD +T
Sbjct: 523 IGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVT 582

Query: 596 YNTII 600
           +NT+I
Sbjct: 583 FNTLI 587



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 138/311 (44%), Gaps = 13/311 (4%)

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS----I 358
           +E L     +G+     ++  ++  Y   G     ++T+D M+  G     + Y+    +
Sbjct: 145 SEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGV 204

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +IK  C    LVE    +   L +    +  TYS  I   C+S ++     L  +M K G
Sbjct: 205 MIKNCCFD--LVEK--YYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFG 260

Query: 419 LKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
             PD   C++ ++ L G     DAL+   +       P++  + T++   C  +R ++ V
Sbjct: 261 CFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAV 320

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L+  M    +KPDV+    LI G+     +  A  L  +ML   +  +V  Y+A+I G 
Sbjct: 321 GLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGF 380

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           ++  +I         M+RNG  PD+  YN+LLN        D A  L  ++   G+ PD 
Sbjct: 381 WRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDR 440

Query: 594 ITYNTIICGYC 604
            +YN ++ G C
Sbjct: 441 YSYNILLKGLC 451


>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
          Length = 665

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 229/495 (46%), Gaps = 40/495 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS---NSVGQYYKLCR 171
           Y  L+  Y R GK D  +E F  M   G         R +  ++ +   + V +YY +  
Sbjct: 163 YRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMAL 222

Query: 172 AMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           A   KGFC+    Y   +  L +   IE    +   + + G  P+   CN  +  LC + 
Sbjct: 223 A---KGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHN 279

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ +A  + + + + G  P+VVT++T+++  C   +  +A  L+  M+   L PD++   
Sbjct: 280 RLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACG 339

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI GL K  ++ E  EL    L   ++L+V ++++++  +   G + +A +T   M   
Sbjct: 340 ALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRN 399

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V++Y+IL+   C  G   +A  L  ++ +  + P   +Y+ L+ G CK+ +L   
Sbjct: 400 GCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKA 459

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
           F+   + ++ G   D V C++LI                              D  CR K
Sbjct: 460 FAFVSDHMEVGGFCDIVSCNILI------------------------------DAFCRAK 489

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +    + LF  MG   I+ D +T+ +LI G+   G  + A  LF QML   + P+V  Y+
Sbjct: 490 KVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYN 549

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            ++H L K  +      +F  M +  V+PD   +N L+  L K      AL LF ++  +
Sbjct: 550 IMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTK 609

Query: 588 GLEPDIITYNTIICG 602
           G+EPD +T+  II G
Sbjct: 610 GVEPDNLTFRYIISG 624



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 227/468 (48%), Gaps = 9/468 (1%)

Query: 110 DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           +FG DY+  I   ++    D   + +      G  L+P    R ++ L  SN +    +L
Sbjct: 193 EFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEEL 252

Query: 170 CRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
              M   G    F      ++ L     + +A  M  ++  +G  P++VT   ++  LC 
Sbjct: 253 LTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCD 312

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           + +   A  L++ ++  G KP+VV    LI   CK  K+++AF+L + M+ +D+  ++ I
Sbjct: 313 HRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSI 372

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LI G ++AG +++  + +      G + DVV ++ +++ Y  IG   +A     +M 
Sbjct: 373 YNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKME 432

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  P+  SY+IL+KGLC+  +L +A       +       +++ + LID FC++ K+ 
Sbjct: 433 MSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVN 492

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLM 460
              +L+  M  +G++ DAV   +LINGL G      A   F Q +   ++PN+ ++N ++
Sbjct: 493 SALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIML 552

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
              C++       K+F  M    + PD +T   LI  +        A+ LF +M  +G+ 
Sbjct: 553 HNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVE 612

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           PD +T+  II GL      ++   +++ M  NG+  D  +   L+++L
Sbjct: 613 PDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILDRDVSERLISVL 660



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/545 (22%), Positives = 239/545 (43%), Gaps = 55/545 (10%)

Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            LFR    +  C    +I   +  G+  ESVE+   +  + + L P +V +++  L DS 
Sbjct: 52  ELFRPVRTETSC---VIIGRALECGRWSESVEL--ELEGLHVELDPFVVNKVLRGLSDSG 106

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
              ++Y    A    GF    F +  ++    +++ F +  + + R      V  ++ L 
Sbjct: 107 MAVRFYWW--AESRPGFYHNNFAIAYIISLLFVDDNFALLLEFLGR-VRSQGVAFHRSLY 163

Query: 222 RLCING--QIGNASSL---FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           R+ + G  + G   S+   FD ++  G +   V ++  I    K    +   + YN+ + 
Sbjct: 164 RVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMALA 223

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGDVG 335
                    YS  I  L ++ R+ E  E LLT +D+ G   D    +  +    G   + 
Sbjct: 224 KGFCLTPFTYSRWITALCQSNRI-ELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLY 282

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A+Q  ++M   G  P+V++Y+ ++  LC   R  EA GL+ +++ R L+P ++   +LI
Sbjct: 283 DALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALI 342

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-GDALRFFFQSV----RMTLI 450
            G CK+ K+ + F L   M+   ++ +  + + LI+G     ++   +++V    R    
Sbjct: 343 FGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCE 402

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P++  +N L++  C +        L   M M  + PD  ++ +L++G+     L  A   
Sbjct: 403 PDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAF 462

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG----------------- 553
               ++ G   D+++ + +I    + K ++  L++FK M   G                 
Sbjct: 463 VSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFG 522

Query: 554 ------------------VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
                             + P++ +YN++L+ L K  +   A K+F Q+T + + PD +T
Sbjct: 523 IGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVT 582

Query: 596 YNTII 600
           +NT+I
Sbjct: 583 FNTLI 587



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 13/310 (4%)

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS----IL 359
           E L     +G+     ++  ++  Y   G     ++T+D M+  G     + Y+    ++
Sbjct: 146 EFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVM 205

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IK  C    LVE    +   L +    +  TYS  I   C+S ++     L  +M K G 
Sbjct: 206 IKNCCFD--LVEK--YYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGC 261

Query: 420 KPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD   C++ ++ L G     DAL+   +       P++  + T++   C  +R ++ V 
Sbjct: 262 FPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVG 321

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L+  M    +KPDV+    LI G+     +  A  L  +ML   +  +V  Y+A+I G +
Sbjct: 322 LWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFW 381

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +  +I         M+RNG  PD+  YN+LLN        D A  L  ++   G+ PD  
Sbjct: 382 RAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRY 441

Query: 595 TYNTIICGYC 604
           +YN ++ G C
Sbjct: 442 SYNILLKGLC 451


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 151/607 (24%), Positives = 269/607 (44%), Gaps = 80/607 (13%)

Query: 71  IHVLLQSDMRDVASHVFDKMVIQ-FGKTYNFFRLFR-----DSLGDFGCDYSFLIENYVR 124
           +H+L+Q+ M   A  V   + +  F  +  F  L R     D    F  D   L+  YV+
Sbjct: 115 VHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVD--LLVNAYVK 172

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CV 180
            GK+ ++     +M + G   S      +++ LV  N     +   +    + F      
Sbjct: 173 EGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTT 232

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
              ++N L  +G +  A  M  Q ++   +PN VT N IL      G+  +A  + D + 
Sbjct: 233 CNIVLNSLCTQGKLSKAESM-LQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDME 291

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G + ++ T++ +I+  CK  +  +A+ L   M E++L PD   Y+ LI G F  G++ 
Sbjct: 292 KNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKIN 351

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIG--------------------DVGRAVQT 340
               +    L + LK  V  +++++D Y   G                    +V +A Q 
Sbjct: 352 LAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQI 411

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR-RLEPSLLTYSSLIDGFC 399
              ML  G  P+VI+YS LI     +G + EA   F Q + R ++   + +++ +ID +C
Sbjct: 412 LKCMLADGIDPDVITYSALI----NEGMIAEA-EQFKQYMSRMKISFDVASFNCIIDSYC 466

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-------------------------- 433
           + G + + FS+YDNM++ G  PD      L+ GL                          
Sbjct: 467 QRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEK 526

Query: 434 --------------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
                         + +AL    + V   ++P+ + +  L+DG C+  +    + L  +M
Sbjct: 527 TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMM 586

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML-KRGLTPDVITYSAIIHGLFKGKN 538
               + PD I +T L+ G+ ++G + +A  +F +++ K GL  D I Y+++++G  KG  
Sbjct: 587 LEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQ 646

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           I+    + + M  N V P  A YN+L++  IK+  L   L L+  +   G++PD +TY  
Sbjct: 647 INEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRL 706

Query: 599 IICGYCS 605
           +I G C 
Sbjct: 707 LIFGLCE 713



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 143/579 (24%), Positives = 260/579 (44%), Gaps = 66/579 (11%)

Query: 98  YNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIY------------- 144
           Y F ++ R SL      Y+ LI+ Y R G+ DE+  +   M   G+              
Sbjct: 355 YIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKC 414

Query: 145 -----LSPDLVQRLMSCLVDSNSVGQYYKLCRAM-RGK-GFCVYEF--LMNGLLRKGVIE 195
                + PD++    S L++   + +  +  + M R K  F V  F  +++   ++G + 
Sbjct: 415 MLADGIDPDVIT--YSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVL 472

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            AF ++  +++ G+ P+I T   +L+ LC  G +  A      LL      +  T +TL+
Sbjct: 473 EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLL 532

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
              CK   L++A  L   M+  +++PD   Y+IL+DG  K G++     LL   L++GL 
Sbjct: 533 VGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLV 592

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRML-NGGFLPNVISYSILIKGLCQQGRLVEACG 374
            D + ++ +++  V  G V  A   +  ++   G   + I+Y+ ++ G  + G++ E   
Sbjct: 593 PDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIER 652

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI---- 430
           L   +    + PS  +Y+ L+ G+ K G+L     LY +M+K G+KPD V   LLI    
Sbjct: 653 LMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLC 712

Query: 431 -NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
             GL+  A++F  + V   + P+   F+ L+       + ++ ++LF  M   ++ P   
Sbjct: 713 EYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSK 772

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY----------------------- 526
           T+  ++ G+  +  L  +  +   M++ GL P    Y                       
Sbjct: 773 TYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDM 832

Query: 527 ------------SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
                       S+I+ GL K   +   + +F  + R G+ P IA +  L++ L KE  +
Sbjct: 833 KALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKI 892

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
           D A  L   +   GL+ D++TYN +I G C+   C+ D 
Sbjct: 893 DDAFHLKQLMESCGLKVDVVTYNVLITGLCN-KKCICDA 930



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/563 (22%), Positives = 246/563 (43%), Gaps = 63/563 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++  YV+ G+   ++ I   M   GI         ++  L       + Y L + MR
Sbjct: 267 YNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMR 326

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING--- 227
                   C Y  L++G   +G I  A ++  Q++++   P++ T   ++   C NG   
Sbjct: 327 EVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTD 386

Query: 228 -----------------QIGNASSLFDVLLLVGPKPNVVTFSTLIN-------------- 256
                            ++  A  +   +L  G  P+V+T+S LIN              
Sbjct: 387 EARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYM 446

Query: 257 -----------------AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                            ++C+   + +AF +Y+ M+     PD+  Y  L+ GL + G L
Sbjct: 447 SRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHL 506

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +  E ++  L++   +D    ++++      G +  A+   ++M+    LP+  +Y+IL
Sbjct: 507 VQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTIL 566

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI-KRG 418
           + G C++G++V A  L   +L + L P  + Y+ L++G    G+++    ++  +I K G
Sbjct: 567 LDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG 626

Query: 419 LKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           L  D +  + ++NG +      +  R         + P+   +N LM G  +  + + T+
Sbjct: 627 LYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL 686

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L+  M    IKPD +T+ +LI G+   G +  A+    +M+  G+ PD + +  +I   
Sbjct: 687 YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAF 746

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            +   +S  L +F  M+   ++P    Y  ++N LI++  L  + ++   + + GL+P  
Sbjct: 747 SEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKH 806

Query: 594 ITYNTIICGYCSLNSCLIDGYFK 616
             Y  +I   C +    IDG F+
Sbjct: 807 THYIALINAKCRVGD--IDGAFE 827



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/489 (22%), Positives = 225/489 (46%), Gaps = 10/489 (2%)

Query: 113 CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           C Y  L+    + G + ++ E   Y+ +    +    +  L+  +    ++ +   LC  
Sbjct: 491 CTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEK 550

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +        Y  L++G  ++G +  A  + + ++++G VP+ +    +L  L   GQ
Sbjct: 551 MVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ 610

Query: 229 IGNASSLF-DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +  AS +F +++   G   + + +++++N + K  ++ +  +L   M E ++ P    Y+
Sbjct: 611 VKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYN 670

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           IL+ G  K G+L     L    +  G+K D V +  ++      G +  AV+  ++M+  
Sbjct: 671 ILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLE 730

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+ +++ ILIK   ++ ++  A  LF  +    + PS  TY ++++G  +   L+  
Sbjct: 731 GVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQS 790

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           + +  +M++ GL+P       LIN     G +  A         + ++P+    ++++ G
Sbjct: 791 YEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRG 850

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+  +  + + +F  +    + P + T T L+ G+  +  +  A  L   M   GL  D
Sbjct: 851 LCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVD 910

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V+TY+ +I GL   K I   L +++ M+  G+ P+I  Y  L   +     +    KL  
Sbjct: 911 VVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLK 970

Query: 583 QLTDRGLEP 591
            + DRG+ P
Sbjct: 971 DIEDRGIVP 979



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 141/325 (43%), Gaps = 44/325 (13%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LI  L +  + ++A    +KMV++         +F D+L      +  LI+ +    K+ 
Sbjct: 707 LIFGLCEYGLIEIAVKFLEKMVLE--------GVFPDNLA-----FDILIKAFSEKSKMS 753

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
            ++++F+YM    +++SP                                 Y  ++NGL+
Sbjct: 754 NALQLFSYMK--WLHMSPSSK-----------------------------TYVAMVNGLI 782

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           RK  ++ ++ +   +++ G  P       ++   C  G I  A  L + +  +G  P+ V
Sbjct: 783 RKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEV 842

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
             S+++   CK  K+E+A  +++ +M   +VP +  ++ L+ GL K  ++ +   L    
Sbjct: 843 AESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLM 902

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
              GLK+DVV ++ ++        +  A+  Y+ M + G LPN+ +Y  L   +   G +
Sbjct: 903 ESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTM 962

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSL 394
            +   L   +  R + PS     SL
Sbjct: 963 QDGEKLLKDIEDRGIVPSYKHPESL 987


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 221/465 (47%), Gaps = 43/465 (9%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +  L+ G   +   E    + R++  RG   N  T   IL  LC    +  A S F+ + 
Sbjct: 131 FNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVS 190

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
               +P + T++ L++  CK  K+E+A  ++  M+     PD+I YS LIDGL KAGR+ 
Sbjct: 191 PNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVD 250

Query: 301 EGNELLLTALDRGLKLDVVVFSSVM----------------------------------- 325
           E  +L+   + RG     V ++S++                                   
Sbjct: 251 EARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIV 310

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
             Y+G+G V +A    + M +    P+ ISY++ I+ L   GR  EA  +F  ++ +  +
Sbjct: 311 TGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCK 370

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P + TY  +ID FCK G +     +   M K  +KP+  + +++++G      + +AL  
Sbjct: 371 PDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALEL 430

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY--NIKPDVITHTVLIRGI 498
           + + ++  ++P+   +NT+++  C+LK+  + ++L   M      ++P ++T++++I G+
Sbjct: 431 YQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGL 490

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G    A  L  +M+  G+ PD  TY+++I  L     +S  + + + M + G+ PD 
Sbjct: 491 GKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDD 550

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             Y  L+ +L +  ++DAA  L  ++   G  P+  T+  +  G+
Sbjct: 551 HTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 214/451 (47%), Gaps = 17/451 (3%)

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTC 216
           N++G Y+    A    GF    F  N LL    R G + +A    +  I     PN+ + 
Sbjct: 78  NALGFYH---WAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSF 131

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N +L+           ++L   +   G   N  T   +++A C    L+KA   +N +  
Sbjct: 132 NILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSP 191

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
               P L  Y++L+DGL KA +++   ++    + +G K D++ +SS++D     G V  
Sbjct: 192 NKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDE 251

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A +  D M+  G  P  ++Y+ ++ GLC+ GR+ EA     ++  RRL P + TYS ++ 
Sbjct: 252 ARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVT 311

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI-----P 451
           G+   GK+   F++ + M  R   PD +  ++ I  L     R   + V  T++     P
Sbjct: 312 GYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKP 371

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           ++  +  ++D  C+         +  LM    +KP+   +T+++ G      L  A+ L+
Sbjct: 372 DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELY 431

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER--NGVAPDIAIYNVLLNMLI 569
            ++LK G+ P  +TY+ +I+ L K K +   L + + M+R    + P I  Y+++++ L 
Sbjct: 432 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLG 491

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           K    + A  L  ++ D G+ PD  TY ++I
Sbjct: 492 KVGMEERAFDLLAEMIDNGVIPDCFTYTSLI 522



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 187/412 (45%), Gaps = 43/412 (10%)

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
           H    + GF   + T N +L  L   G + +A   F   +    +PNV +F+ L+  F  
Sbjct: 84  HWAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSI---SEPNVSSFNILLRGFAA 140

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
               E                                     N LL     RG+  +   
Sbjct: 141 RDDFEVV-----------------------------------NALLREMKSRGITSNGAT 165

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
              ++ A     D+ +AV  ++ +      P + +Y++L+ GLC+  ++  AC +F +++
Sbjct: 166 HGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMI 225

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
            +  +P ++ YSSLIDG  K+G++ +   L D M+ RG  P AV  + ++ GL     + 
Sbjct: 226 RKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQ 285

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +A++   +  R  L P +  ++ ++ G   + +      +   M   +  PD I++T+ I
Sbjct: 286 EAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFI 345

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
             + S G    A  +F  M+++G  PD+ TY  II    K  +++   H+ +LM++  V 
Sbjct: 346 EALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVK 405

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           P+  IY ++++  +K   L+ AL+L+ ++   G+ P  +TYNT+I   C L 
Sbjct: 406 PNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLK 457



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 186/426 (43%), Gaps = 76/426 (17%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMG------IYLSPDLVQRLMSCLVDSNSVGQYYK 168
           YS LI+   + G++DE+ ++   M   G       Y S  +V  L  C     +V    +
Sbjct: 236 YSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTS--IVAGLCKCGRIQEAVKTIQE 293

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + R         Y F++ G +  G +E AF +  ++  R   P+ ++    ++ L   G+
Sbjct: 294 MRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGR 353

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +F+ ++  G KP++ T+  +I+ FCKE  +  A  +  LM +  + P+  IY++
Sbjct: 354 REEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTM 413

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++DG  K+ RL+E  EL                                   Y R+L  G
Sbjct: 414 IMDGFVKSSRLEEALEL-----------------------------------YQRILKDG 438

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR--LEPSLLTYSSLIDGFCKSGKLRD 406
            LP+ ++Y+ +I  LC+  ++ EA  L  ++  R+  LEPS++TYS +I G  K G    
Sbjct: 439 ILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEER 498

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
            F L   MI  G+ PD    + LI  L G                             ++
Sbjct: 499 AFDLLAEMIDNGVIPDCFTYTSLIQTLAGAG---------------------------KV 531

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            RA + ++  +  G++   PD  T+  L++ I  +  + +A  L  +M++ G TP+  T+
Sbjct: 532 SRAMELLEEMLKAGIF---PDDHTYGTLVQ-ILCRSDVDAAWDLLQEMMRNGHTPNEFTF 587

Query: 527 SAIIHG 532
            A+  G
Sbjct: 588 KAVEKG 593



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 142/292 (48%), Gaps = 11/292 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM--SCLVDSNSVGQYYKLCRA 172
           YSF++  Y+ +GK++++  +   M+D     +PD +   M    L       +  K+   
Sbjct: 306 YSFIVTGYIGMGKVEKAFAVMEEMADRDC--APDTISYTMFIEALYSIGRREEAEKVFET 363

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  +++   ++G +  A H+ R + +    PN      I+     + +
Sbjct: 364 MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSR 423

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM--EMDLVPDLIIY 286
           +  A  L+  +L  G  P+ VT++T+INA CK  K+++A +L   M   + +L P ++ Y
Sbjct: 424 LEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTY 483

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           S++I GL K G  +   +LL   +D G+  D   ++S++    G G V RA++  + ML 
Sbjct: 484 SMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLK 543

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
            G  P+  +Y  L++ LC+   +  A  L  +++     P+  T+ ++  GF
Sbjct: 544 AGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 30/266 (11%)

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M + G   N  ++ +++  LC +  L +A   F  V   + EP+L TY+ L+DG CK+ 
Sbjct: 153 EMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAH 212

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           K+     +++ MI++G KPD +                               +++L+DG
Sbjct: 213 KVERACDVFEEMIRKGYKPDIIA------------------------------YSSLIDG 242

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             +  R  +  KL  LM      P  + +T ++ G+   G +  A+    +M +R L P 
Sbjct: 243 LSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPR 302

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V TYS I+ G      +     + + M     APD   Y + +  L      + A K+F 
Sbjct: 303 VDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFE 362

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNS 608
            + ++G +PD+ TY  II  +C   S
Sbjct: 363 TMVEKGCKPDMHTYGIIIDNFCKEGS 388



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 4/168 (2%)

Query: 436 DALRFF-FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
           +AL F+ + + R      LF  N+L+    R    +D +  F        +P+V +  +L
Sbjct: 78  NALGFYHWAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQ---SSISEPNVSSFNIL 134

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           +RG A++        L  +M  RG+T +  T+  I+  L   +++   +  F  +  N  
Sbjct: 135 LRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKC 194

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            P +  Y VL++ L K   ++ A  +F ++  +G +PDII Y+++I G
Sbjct: 195 EPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDG 242


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 219/423 (51%), Gaps = 20/423 (4%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           +P +  CN IL  L     +     LFD +L  G  P+VVT++TLINA   +  + KA++
Sbjct: 135 LPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWE 194

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +++ M+   + P+++ Y+ +I  L +   + +   L L   + G++ ++  ++++M ++ 
Sbjct: 195 VWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHF 254

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
              ++  A+  Y  +L  G +PN + ++ LI GLCQ  R+ EA  +F  +    + P++ 
Sbjct: 255 KRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVP 314

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
            Y+SLI G  +SG  ++  + +  +I++GL+PD   CS+++ GL     M  A RF    
Sbjct: 315 VYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVM 374

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            +  +  N   +N L+D  C+     + +     M    ++P+V+T++ LI G +  G +
Sbjct: 375 QQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEM 434

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ ++ +M+ +G+ P+V+TY+A+IHG  K  ++     + K ME  G+  +    +VL
Sbjct: 435 EIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVL 494

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLE---PDI---ITYNTIICG---------YCSLNSC 609
           ++ L +E  +  A++   + + +      P I   +TY T+I G          C   SC
Sbjct: 495 VDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSC 554

Query: 610 LID 612
           + D
Sbjct: 555 MRD 557



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 213/481 (44%), Gaps = 59/481 (12%)

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFL 184
           DE++ +F  + ++    +      ++  LV ++ + + ++L   M G+G       Y  L
Sbjct: 123 DEALSVFGRLRELPALPA---CNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTL 179

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           +N    +G +  A+ +  Q++ R   PN+VT   ++  LC    IG+A  LF  +   G 
Sbjct: 180 INACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGM 239

Query: 245 KPNVVT-----------------------------------FSTLINAFCKEAKLEKAFQ 269
           +PN+ T                                   F+TLI+  C+  ++ +A  
Sbjct: 240 RPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKN 299

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           ++  M   ++ P + +Y+ LI G F++G  +E        + +GL+ D    S V+    
Sbjct: 300 IFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLC 359

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA---CGLFGQVLIRRLEP 386
             G +  A +  + M   G   N  +Y++LI   C+ G L EA   C    +V +   EP
Sbjct: 360 DGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGV---EP 416

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GDALRFFFQS 444
           +++TYSSLIDG  K+G++    ++Y  M+ +G++P+ V  + LI+G    GD    F+  
Sbjct: 417 NVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQ 476

Query: 445 VRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG---MYNIKPDV---ITHTVLI 495
             M    +  N    + L+DG CR  R  D V+  M           P +   +T+  LI
Sbjct: 477 KEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLI 536

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G+   G  + A   F  M   G+ PD  TY+ +I GL     +   + ++  M + GV 
Sbjct: 537 YGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVK 596

Query: 556 P 556
           P
Sbjct: 597 P 597



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 98/450 (21%), Positives = 194/450 (43%), Gaps = 71/450 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI      G + ++ E++  M  +   + P++V    ++  L + + +G    L   
Sbjct: 176 YNTLINACRHQGDVAKAWEVWDQM--VARRIDPNVVTYTTMICALCEEDCIGDAEGLFLE 233

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G       Y  LM+   ++  I++A   +  +++ G VPN V    ++  LC   +
Sbjct: 234 MKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANR 293

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A ++F  +      P V  +++LI+   +    ++A   +  ++   L PD    SI
Sbjct: 294 ITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSI 353

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++ GL   G+++     L      G+ L+   ++ ++D Y   G++  A+ T  RM   G
Sbjct: 354 VVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVG 413

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL-------------- 394
             PNV++YS LI G  + G +  A  ++ +++ + +EP+++TY++L              
Sbjct: 414 VEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAF 473

Query: 395 ---------------------IDGFCKSGKLRDG--FSLYDNMIKRGLKPDAVVCSLLIN 431
                                +DG C+  +++D   F +  +  K+  K  ++  S+   
Sbjct: 474 WLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV--- 530

Query: 432 GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
                          MTLI  L+I     + C            F  M    + PD  T+
Sbjct: 531 -------------TYMTLIYGLYIDGQYNEAC----------HFFSCMRDSGMVPDRFTY 567

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           T++IRG+   G + +A++L+  M+K G+ P
Sbjct: 568 TLVIRGLCMLGYVLNAMMLYADMVKVGVKP 597



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 159/366 (43%), Gaps = 28/366 (7%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
           NA++++  K +N   A+ F+     C   PN      LI  L Q++    A ++F  M  
Sbjct: 247 NALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMP- 305

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
                       R  +      Y+ LI    R G   E++  F  +   G+         
Sbjct: 306 ------------RYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSI 353

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           ++  L D   +    +    M+  G  +    Y  L++   + G ++ A     ++ + G
Sbjct: 354 VVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVG 413

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN+VT + ++     NG++  A +++  ++  G +PNVVT++ LI+   K   ++ AF
Sbjct: 414 VEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAF 473

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL-------TALDRGLKLDVVVF 321
            L   M E  +  + I  S+L+DGL +  R+++    ++       +  +  +   V   
Sbjct: 474 WLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYM 533

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           + +   Y+  G    A   +  M + G +P+  +Y+++I+GLC  G ++ A  L+  ++ 
Sbjct: 534 TLIYGLYID-GQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVK 592

Query: 382 RRLEPS 387
             ++P+
Sbjct: 593 VGVKPT 598



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%)

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           R+  +P L   N ++DG  +        +LF  M    + P V+T+  LI     QG ++
Sbjct: 131 RLRELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVA 190

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  ++ QM+ R + P+V+TY+ +I  L +   I     +F  M+  G+ P++  YN L+
Sbjct: 191 KAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALM 250

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +   K  N+  AL  +  L   GL P+ + + T+I G C  N
Sbjct: 251 SSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQAN 292


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 261/538 (48%), Gaps = 53/538 (9%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           S ++  + R GK+ E+  +F  M +MG  L P+ V    +++ L  S  V + + L   M
Sbjct: 360 SSILYGFCRHGKLTEAAVLFREMYEMG--LDPNHVSYATIINSLFKSGRVMEAFNLQSQM 417

Query: 174 --RGKGFCVYE--FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             RG  F +     +M+GL + G  + A  +   +++    PN VT + +L   C  G++
Sbjct: 418 VVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKM 477

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  +   +      PNV+TFS++IN + K+  L KA  +   M++ +++P+ I+Y+IL
Sbjct: 478 ELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAIL 537

Query: 290 IDGLFKAG---------------RLKEGN---ELLLTALDR-----------------GL 314
           IDG FKAG               RL+E N   ++LL  L R                 G+
Sbjct: 538 IDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI 597

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             D+V ++S++D Y   G+   A+     M       +V++Y+ LIKGL + G+  +   
Sbjct: 598 DPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRY 656

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           +  +++   L P  +TY+++I+ +C  GK  D   + + M   G+ P+AV  ++LI GL 
Sbjct: 657 VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLC 716

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               +  A     + + M  +P       L+    R ++A   +++   +    ++  + 
Sbjct: 717 KTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLT 776

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
            +  LI      G    A ++  +M+KRG++ D++TY+A+I G   G ++   L  +  M
Sbjct: 777 VYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQM 836

Query: 550 ERNGVAPDIAIYNVLL----NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             +G+AP+I  YN LL    N  + E  ++   KL  ++ +RGL P+  TY+ ++ GY
Sbjct: 837 FVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY 894



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 212/403 (52%), Gaps = 6/403 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           +   P +VT   ++   C    +  + SL+  +++ G  P+VVT S+++  FC+  KL +
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  L+  M EM L P+ + Y+ +I+ LFK+GR+ E   L    + RG+  D+V  ++VMD
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
               +G    A + ++ +L     PN ++YS L+ G C+ G++  A  +  ++    + P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFF 442
           +++T+SS+I+G+ K G L     +   M++R + P+ +V ++LI+G       D    F 
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 554

Query: 443 QSVR-MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
           + ++   L  +  IF+ L++   R+ R  +   L + M    I PD++ +  LI G   +
Sbjct: 555 KEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKE 614

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G+  +A+ +  +M ++ +  DV+ Y+A+I GL +           +++E  G+APD   Y
Sbjct: 615 GNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIEL-GLAPDCITY 673

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           N ++N    +   + AL +  ++   G+ P+ +TYN +I G C
Sbjct: 674 NTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLC 716



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 241/501 (48%), Gaps = 12/501 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  Y +   ++ES  ++  M   GI   PD+V    ++        + +   L R 
Sbjct: 324 YTTLIAAYCKFVGVEESHSLYKKMIMNGIM--PDVVTCSSILYGFCRHGKLTEAAVLFRE 381

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  ++N L + G +  AF++  Q++ RG   +IVTC  ++  L   G+
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +F+ +L +   PN VT+S L++ +CK  K+E A  +   M +  + P++I +S 
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+G  K G L +  ++L   + R +  + +V++ ++D Y   G+   A      M +  
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRR 561

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              + + + IL+  L + GR+ EA  L   +  + ++P ++ Y+SLIDG+ K G      
Sbjct: 562 LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAAL 621

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           S+   M ++ ++ D V  + LI GL+     D      + + + L P+   +NT+++  C
Sbjct: 622 SIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYC 681

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
              +  D + +   M  Y I P+ +T+ +LI G+   G++  A     +ML     P  I
Sbjct: 682 IKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPI 741

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           T+  ++    + +     L + + +  +G+   + +YN L+ +  +      A  +  ++
Sbjct: 742 THKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEM 801

Query: 585 TDRGLEPDIITYNTIICGYCS 605
             RG+  D++TYN +I GYC+
Sbjct: 802 VKRGISADLVTYNALIRGYCT 822



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 214/445 (48%), Gaps = 25/445 (5%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL--- 240
           L++G    G++  A  +     +     +IVT N +LK  C  G +  A SLF+ +L   
Sbjct: 238 LIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFW 297

Query: 241 ----------------LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
                           +   +P +VT++TLI A+CK   +E++  LY  M+   ++PD++
Sbjct: 298 KDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVV 357

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
             S ++ G  + G+L E   L     + GL  + V +++++++    G V  A     +M
Sbjct: 358 TCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM 417

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +  G   ++++ + ++ GL + G+  EA  +F  +L   L P+ +TYS+L+DG+CK GK+
Sbjct: 418 VVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKM 477

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTL 459
                +   M K  + P+ +  S +IN     G++  A+    + V+  ++PN  ++  L
Sbjct: 478 ELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAIL 537

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +DG  +             M    ++   +   +L+  +   G +  A  L   M  +G+
Sbjct: 538 IDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI 597

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PD++ Y+++I G FK  N    L + + M+   +  D+  YN L+  L++    D    
Sbjct: 598 DPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY- 656

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           +  ++ + GL PD ITYNTII  YC
Sbjct: 657 VCSRMIELGLAPDCITYNTIINTYC 681



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 228/476 (47%), Gaps = 47/476 (9%)

Query: 173 MRGKGFCVYEFLMNGLLRK----GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR  G        N LL +    G++     M+  ++  G VP++ + N ++  LC  G 
Sbjct: 85  MRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGD 144

Query: 229 IGNASSLF---DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           +  A       DV+ +     + VT++T+I  FC++  +++ F L + M++  L  D I 
Sbjct: 145 LDLALGYLRNNDVVDI-----DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSIT 199

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
            +IL+ G  + G ++    ++   +D G+  DV+  ++++D Y   G + +A +  +   
Sbjct: 200 CNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSW 259

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL-------------------IRRLEP 386
                 ++++Y+ L+K  C+ G L  A  LF ++L                   I+ L+P
Sbjct: 260 RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQP 319

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFF 441
           +L+TY++LI  +CK   + +  SLY  MI  G+ PD V CS ++     +G + +A   F
Sbjct: 320 TLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLF 379

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +   M L PN   + T+++   +  R  +   L   M +  I  D++T T ++ G+   
Sbjct: 380 REMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKV 439

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G    A  +F  +LK  L P+ +TYSA++ G  K   + +   + + ME+  V P++  +
Sbjct: 440 GKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITF 499

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
           + ++N   K+  L  A+ +  ++  R + P+ I Y           + LIDGYFK+
Sbjct: 500 SSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVY-----------AILIDGYFKA 544



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/536 (22%), Positives = 244/536 (45%), Gaps = 57/536 (10%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN-SVGQY-------YKLCRAMRG 175
           ++GK  E+ E+F  +  + + L+P+ V    S L+D    +G+         K+ +    
Sbjct: 438 KVGKTKEAEEVFETI--LKLNLAPNCVT--YSALLDGYCKLGKMELAELVLQKMEKEHVP 493

Query: 176 KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT-------------------- 215
                +  ++NG  +KG++  A  + R+++QR  +PN +                     
Sbjct: 494 PNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDF 553

Query: 216 CNKILKR----------LCIN-----GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
           C ++  R          + +N     G++  A SL   +   G  P++V +++LI+ + K
Sbjct: 554 CKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFK 613

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
           E     A  +   M E ++  D++ Y+ LI GL + G+  +   +    ++ GL  D + 
Sbjct: 614 EGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCIT 672

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           ++++++ Y   G    A+   + M + G +PN ++Y+ILI GLC+ G + +A     ++L
Sbjct: 673 YNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEML 732

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMG 435
           +    P+ +T+  L+  + +S K      +++ ++  GL+    V + LI      G+  
Sbjct: 733 VMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTR 792

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
            A     + V+  +  +L  +N L+ G C        +K +  M +  I P++ T+  L+
Sbjct: 793 KAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLL 852

Query: 496 RGIASQG----SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
            G+++ G     +     L  +M +RGL P+  TY  ++ G  +  N    + +   M  
Sbjct: 853 GGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMIT 912

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            G  P +  YNVL++   K   +  A +L   L  +G  P+  TY+ + CG+ +L+
Sbjct: 913 KGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLS 968



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 117/517 (22%), Positives = 210/517 (40%), Gaps = 89/517 (17%)

Query: 19  YCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSD 78
           YC   K  +++L       +L  + K + P   I F    +       +++ + VL +  
Sbjct: 471 YCKLGKMELAEL-------VLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 79  MRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD-------------YSFLIENYVRI 125
            R+V  +     ++  G    +F+     + D  C              +  L+ N  R+
Sbjct: 524 QRNVMPNTIVYAILIDG----YFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRV 579

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK---------LCRAMRGK 176
           G++DE+  +   M   GI   PD+V    + L+D      Y+K         + + M+ K
Sbjct: 580 GRMDEARSLIIDMYSKGI--DPDIVN--YASLIDG-----YFKEGNQLAALSIVQEMKEK 630

Query: 177 GF----CVYEFLMNGLLR----------------------------------KGVIENAF 198
                   Y  L+ GLLR                                  KG  E+A 
Sbjct: 631 NIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDAL 690

Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
            +  ++   G +PN VT N ++  LC  G +  A S  D +L++   P  +T   L+ A+
Sbjct: 691 DILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAY 750

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
            +  K +K  Q++  ++   L   L +Y+ LI    + G  ++   +L   + RG+  D+
Sbjct: 751 SRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADL 810

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG----RLVEACG 374
           V +++++  Y     V +A++TY +M   G  PN+ +Y+ L+ GL   G     + E   
Sbjct: 811 VTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEK 870

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI---- 430
           L  ++  R L P+  TY  L+ G+ + G  +    L+  MI +G  P     ++LI    
Sbjct: 871 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 930

Query: 431 -NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
            +G M +A       +    IPN F ++ L  G   L
Sbjct: 931 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNL 967



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 162/374 (43%), Gaps = 61/374 (16%)

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           F TLI  +    +   A   ++ M  + LVP L  ++ L+     +G + +         
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQ--------- 112

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
              +KL                        Y  ML  G +P+V S ++L+  LC+ G L 
Sbjct: 113 ---VKL-----------------------MYSDMLFCGVVPDVFSVNVLVHSLCKVGDLD 146

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
            A G      +  ++   +TY+++I GFC+ G +  GF L   M+KRGL  D++ C++L+
Sbjct: 147 LALGYLRNNDVVDIDN--VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILV 204

Query: 431 NGLMGDALRFFFQSVRMTLI-----PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
            G     L  + + V   L+      ++   NTL+DG C     +   +L       ++K
Sbjct: 205 KGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVK 264

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLK-------------------RGLTPDVITY 526
            D++T+  L++     G L+ A  LF ++L                    + L P ++TY
Sbjct: 265 IDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTY 324

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           + +I    K   +     ++K M  NG+ PD+   + +L    +   L  A  LF ++ +
Sbjct: 325 TTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYE 384

Query: 587 RGLEPDIITYNTII 600
            GL+P+ ++Y TII
Sbjct: 385 MGLDPNHVSYATII 398



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 26/273 (9%)

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           +  LI+      R   A   F  +    L P+L  +++L+  F  SG +     +Y +M+
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 416 KRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G+ PD    ++L++ L  +GD   AL  + ++  +  I N+  +NT++ G C+     
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALG-YLRNNDVVDIDNV-TYNTVIWGFCQKGLVD 179

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
               L   M    +  D IT  +L++G    G +  A  + + ++  G+T DVI  + +I
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL------ 584
            G  +   +S    + +   R+ V  DI  YN LL    K  +L  A  LF ++      
Sbjct: 240 DGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKD 299

Query: 585 TDR-------------GLEPDIITYNTIICGYC 604
            DR              L+P ++TY T+I  YC
Sbjct: 300 EDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYC 332


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 143/583 (24%), Positives = 252/583 (43%), Gaps = 57/583 (9%)

Query: 71  IHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDE 130
           +  L+++   D A  VFD+M        N +             Y+ +I+   + GK+D 
Sbjct: 192 LEALVRAGQLDAAREVFDEMRESRNVALNEY------------SYTAMIKALCKAGKVDA 239

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMN 186
             E+ A +   G+  +      LM  L  S  V + ++L   M   G       +  L+N
Sbjct: 240 GFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILIN 299

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           GL R         + +++ Q G  PN V  N+++   C  G    A  LFD ++L   KP
Sbjct: 300 GLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKP 359

Query: 247 NVVTFSTLINAFCKEAKLEKA------------------------------------FQL 270
             VT++ +  A CKE ++E+A                                      +
Sbjct: 360 TAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSI 419

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
            N M+   + P+  + +  +  L K G+ +E   +    L++GL +++   ++++     
Sbjct: 420 TNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCE 479

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
              +  A +    MLN G   + I+Y+I+I+G C+  ++ EA  L G +  R  +P L T
Sbjct: 480 GKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFT 539

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           +++L+  +C  GK+ + F L D M   GL+PD V    +I+G      +  A  +  + +
Sbjct: 540 FNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 599

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              L PN+FI+N L+ G  R    +  +     M    I+P  +T+  L+  +   G + 
Sbjct: 600 DRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVE 659

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  +F Q  +  +   VI Y+ +I G  K   +   +  F+ M   G++P+   Y  L+
Sbjct: 660 EAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM 719

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
               K  N + A KLF ++   G+ PD ITY T+I     +NS
Sbjct: 720 YAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNS 762



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 218/471 (46%), Gaps = 50/471 (10%)

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           F ++ F+ +    +G +  A    R +  RG  P+I TCN  L+ L   GQ+  A  +FD
Sbjct: 152 FLIHTFITSPA--QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFD 209

Query: 238 VLLLV-GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
            +        N  +++ +I A CK  K++  F++   +    L P ++ Y++L+D L K+
Sbjct: 210 EMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKS 269

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV---GIGDVGRAVQTYDRMLNGGFLPNV 353
           GR++E   L       G+   VV F  +++        G+VG  +Q  +++   G  PN 
Sbjct: 270 GRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQL---GVSPNE 326

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG----------- 402
           + Y+ LI   C++G   +A  LF ++++++++P+ +TY+ +    CK G           
Sbjct: 327 VIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILED 386

Query: 403 -------------------------KLRDGFSLYDNMIKRGLKPD-----AVVCSLLING 432
                                    +L    S+ + M+ RG++P+     A +  L   G
Sbjct: 387 MLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGG 446

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
              +A+  +F+++   L  NL   N L+ G C  K   +  K+   M    I+ D IT+ 
Sbjct: 447 KHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYN 506

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           ++IRG      +  AI L   M +RG  PD+ T++ ++H       +    H+   M+  
Sbjct: 507 IMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTE 566

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           G+ PDI  Y  +++   K  ++  A +   +L DRGL+P++  YN +I GY
Sbjct: 567 GLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGY 617



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/474 (22%), Positives = 213/474 (44%), Gaps = 11/474 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + R G   +++ +F  M    +  +      +   L     + +  ++   M 
Sbjct: 329 YNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDML 388

Query: 175 GKGFCVYEFLMNG-----LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             G  V+  L N      L R   +E+   +  +++ RG  PN       ++ LC  G+ 
Sbjct: 389 SIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKH 448

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  ++   L  G   N+ T + LI+  C+   +++A ++   M+   +  D I Y+I+
Sbjct: 449 QEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIM 508

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I G  K  +++E  +L      RG K D+  F++++ AY  +G +       D+M   G 
Sbjct: 509 IRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGL 568

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+++SY  +I G C+   + +A     +++ R L+P++  Y++LI G+ ++G +     
Sbjct: 569 QPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAID 628

Query: 410 LYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
             + M   G++P  V    L+      GL+ +A   F Q+    +   +  +  ++ G C
Sbjct: 629 AVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYC 688

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +L +  + V  F  M    I P+ +T+T L+   +  G+   A  LF +M+  G+ PD I
Sbjct: 689 KLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNI 748

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML-IKECNLDAA 577
           TY  +I    +  ++   +     +    +  D  +YN+L N +    C  +AA
Sbjct: 749 TYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNGINAPWCQKEAA 802


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 234/460 (50%), Gaps = 39/460 (8%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           +M  L  S   G+   L R+M+  G       Y  L+ GL     ++ A  +  ++   G
Sbjct: 129 VMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSG 188

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             PN+V  + +L+  C +G+  +   +F+ +   G KP+V+ F+ LI+  CKE K  KA 
Sbjct: 189 VQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAA 248

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           ++ ++M++  L P+++ Y++LI+ L K G ++E   L     D+G+  DVV +++++   
Sbjct: 249 KVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGL 308

Query: 329 VGIGDVGRAVQTYDRMLNGGFL--PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            G+ ++  A+   + M+ G  +  P+V++++ +I GLC+ GR+ +A  +   +  R    
Sbjct: 309 SGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMC 368

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
           +L+TY+ LI GF +  K++   +L D +   GL+PD+   S+LING              
Sbjct: 369 NLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILING-------------- 414

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
                    F+ + +    + RA    K    M    IK ++  +  L+  +  QG +  
Sbjct: 415 ---------FSKMWE----VDRAE---KFLCTMRQRGIKAELFHYIPLLAAMCQQGMMER 458

Query: 507 AILLFFQMLKR-GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           A+ LF +M K  GL  D I YS +IHG  K  ++     + + M   G+APD   Y++L+
Sbjct: 459 AMGLFNEMDKNCGL--DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLI 516

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           NM  K  +L+ A ++  Q+T  G  PD+  ++++I GY +
Sbjct: 517 NMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSA 556



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 215/464 (46%), Gaps = 12/464 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++       +  E+V +   M   G+         L+  L D++ +    +L   M 
Sbjct: 126 YTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMC 185

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G G      VY  L+ G  R G  ++   +   + +RG  P+++    ++  LC  G+ G
Sbjct: 186 GSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTG 245

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ + D+++  G +PNVVT++ LIN+ CKE  + +A  L   M +  + PD++ Y+ LI
Sbjct: 246 KAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLI 305

Query: 291 DGLFKAGRLKEGNELLLTAL--DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            GL     + E    L   +  D  ++ DVV F+SV+     IG + +AV+  + M   G
Sbjct: 306 AGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERG 365

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            + N+++Y+ LI G  +  ++  A  L  ++ I  LEP   TYS LI+GF K  ++    
Sbjct: 366 CMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAE 425

Query: 409 SLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
                M +RG+K +      ++ ++   G+M  A+  F +  +   + +   ++T++ G 
Sbjct: 426 KFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL-DAIAYSTMIHGA 484

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+        +L   M    + PD +T+++LI   A  G L  A  +  QM   G  PDV
Sbjct: 485 CKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDV 544

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             + ++I G          L +   M    VA D  I + ++ +
Sbjct: 545 AVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIRL 588



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 34/243 (13%)

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG--KLRDGFSLYDNMIKRGLKPDAVVC 426
           + EAC L   +   R     ++Y++++   C+ G   LR   SL  +M  R   P A   
Sbjct: 67  VTEACSLLSALPDVR---DAVSYNTVLAALCRRGGDHLRQARSLLVDM-SREAHPAAR-- 120

Query: 427 SLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                                   PN   + T+M G C  +R  + V L   M    ++ 
Sbjct: 121 ------------------------PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRA 156

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHM 545
           DV+T+  LIRG+     L +A+ L  +M   G+ P+V+ YS ++ G  + G+   VG  +
Sbjct: 157 DVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVG-KV 215

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           F+ M R G+ PD+ ++  L++ L KE     A K+   +  RGLEP+++TYN +I   C 
Sbjct: 216 FEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCK 275

Query: 606 LNS 608
             S
Sbjct: 276 EGS 278


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 220/448 (49%), Gaps = 20/448 (4%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++ L RK  +     +  ++ +RG  PN+   N ++  LC       A ++ + +
Sbjct: 348 TYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQM 407

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +     P+VVTF+TLI AFC+E  +E+A +L    +  +L P+ + Y+ LI G    G +
Sbjct: 408 VASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEV 467

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
              ++LL+  + RG   DVV   +++   V  G V  A+   ++M     +P+   Y++L
Sbjct: 468 MVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVL 527

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC++  L  A  L  ++L ++++P    Y++LIDGF +S KL D   +++ M ++G 
Sbjct: 528 ISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGG 587

Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             D V  + +I     +G+M +A+       ++  IP+ F + TL+DG  +       ++
Sbjct: 588 YRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALR 647

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
               M     KP+++T+  LI G  + G+  SA +LF  M   GL P+V+ Y+ +I  LF
Sbjct: 648 FLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLF 707

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLN--------MLIKECN-------LDAALK 579
           K          F+ M  N  +P+ A  + L+N        M+   C+         A L 
Sbjct: 708 KKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLD 767

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +F  L   GL+P I  YN II   C  N
Sbjct: 768 VFKGLISDGLDPRISAYNAIIFSLCRHN 795



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 204/408 (50%), Gaps = 6/408 (1%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           + G   +  TC  +++ LC+ G++     L +     G  P  V ++ LI+ +C+   + 
Sbjct: 270 REGGADDYSTC-VMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVG 328

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +   L   M    ++P ++ Y  +I  L +   L +   LL    +RGL  +V ++++V+
Sbjct: 329 RGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVI 388

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
            A        +A+   ++M+   F P+V++++ LI   C++G + EA  L  + + R LE
Sbjct: 389 YALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELE 448

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
           P+ L+Y+ LI GFC  G++     L   MI RG  PD V    LI+GL     + +AL  
Sbjct: 449 PNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMV 508

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
             +     ++P+  I+N L+ G C+ +  +    L + M    ++PD   +T LI G   
Sbjct: 509 REKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIR 568

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
              LS A  +F  M ++G   D++ Y+A+I G  K   ++  +     M + G  PD   
Sbjct: 569 SDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFT 628

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           Y  L++   K+ ++ AAL+    +  R  +P+I+TY ++ICGYC++ +
Sbjct: 629 YTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGN 676



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 198/422 (46%), Gaps = 5/422 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++ GL  +G +E    +       G VP  V  N ++   C  G +G    L   + + G
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKG 341

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P VVT+  +I+   +++ L K   L   M E  L P++ IY+ +I  L K     +  
Sbjct: 342 IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQAL 401

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +L   +      DVV F++++ A+   GDV  A++     +     PN +SY+ LI G 
Sbjct: 402 AVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGF 461

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C +G ++ A  L  +++ R   P ++T  +LI G   SG++ +   + + M +R + PDA
Sbjct: 462 CVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDA 521

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            + ++LI+GL     +  A     + +   + P+ F++ TL+DG  R  + +D  K+F  
Sbjct: 522 NIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEF 581

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M       D++ +  +I+G    G ++ A++    M K G  PD  TY+ +I G  K  +
Sbjct: 582 MEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGD 641

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           I   L     M +    P+I  Y  L+       N D+A  LF  +   GL P+++ Y  
Sbjct: 642 IKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTV 701

Query: 599 II 600
           +I
Sbjct: 702 LI 703



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 212/461 (45%), Gaps = 16/461 (3%)

Query: 163 VGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           V +  +L  A  G+G CV     Y  L++G  R+G +     +  ++  +G +P +VT  
Sbjct: 292 VEEGRRLIEARWGEG-CVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYG 350

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            I+  L     +    SL   +   G  PNV  ++T+I A CK     +A  + N M+  
Sbjct: 351 AIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVAS 410

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              PD++ ++ LI    + G ++E  +LL  A+ R L+ + + ++ ++  +   G+V  A
Sbjct: 411 RFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVA 470

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
                 M+  G  P+V++   LI GL   G++ EA  +  ++  R++ P    Y+ LI G
Sbjct: 471 SDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISG 530

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
            CK   L    +L   M+++ ++PD  V + LI+G      + DA + F          +
Sbjct: 531 LCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRD 590

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  +N ++ G C+     + V     M      PD  T+T LI G A +G + +A+    
Sbjct: 591 IVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLC 650

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            M+KR   P+++TY+++I G     N      +F  M+  G+ P++  Y VL+  L K+ 
Sbjct: 651 DMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKD 710

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTII-----CGYCSLNS 608
               A   F  +      P+  T + ++     C Y  +NS
Sbjct: 711 KAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINS 751



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 209/455 (45%), Gaps = 48/455 (10%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+    R+G +E A  + R+ I+R   PN ++   ++   C+ G++  AS L   +
Sbjct: 418 TFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEM 477

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G  P+VVT   LI+      ++++A  +   M E  ++PD  IY++LI GL K   L
Sbjct: 478 IGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRML 537

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                LL+  L++ ++ D  V+++++D ++    +  A + ++ M   G   ++++Y+ +
Sbjct: 538 SAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAM 597

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKG C+ G + EA      +      P   TY++LIDG+ K G ++       +M+KR  
Sbjct: 598 IKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRC 657

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           K                              PN+  + +L+ G C +        LF  M
Sbjct: 658 K------------------------------PNIVTYASLICGYCNIGNTDSAEVLFASM 687

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF----- 534
               + P+V+ +TVLI  +  +     A   F  ML    +P+  T   +++GL      
Sbjct: 688 QSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYG 747

Query: 535 ----------KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
                     +    S  L +FK +  +G+ P I+ YN ++  L +   L  A++L  ++
Sbjct: 748 MINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKM 807

Query: 585 TDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           +++G  PD +T+ +++ G+ S+      G ++S +
Sbjct: 808 SNKGCLPDPVTFLSLLYGFSSVGK---SGKWRSAL 839



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 165/391 (42%), Gaps = 58/391 (14%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++G   +G +  A  +  ++I RG  P++VT   ++  L ++GQ+  A  + + + 
Sbjct: 454 YTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMA 513

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                P+   ++ LI+  CK+  L  A  L   M+E  + PD  +Y+ LIDG  ++ +L 
Sbjct: 514 ERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLS 573

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +  ++     ++G   D+V +++++  Y   G +  AV     M   G +P+  +Y+ LI
Sbjct: 574 DARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLI 633

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G  ++G +  A      ++ RR +P+++TY+SLI G+C  G       L+ +M   GL 
Sbjct: 634 DGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLF 693

Query: 421 PDAVV----------------------------CS-------LLINGLMG---------- 435
           P+ V                             CS        L+NGL            
Sbjct: 694 PNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNC 753

Query: 436 ---------DALRFFFQS-VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
                     AL   F+  +   L P +  +N ++   CR       ++L   M      
Sbjct: 754 SDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCL 813

Query: 486 PDVITHTVLIRGIAS---QGSLSSAILLFFQ 513
           PD +T   L+ G +S    G   SA+   FQ
Sbjct: 814 PDPVTFLSLLYGFSSVGKSGKWRSALPNEFQ 844



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 32/232 (13%)

Query: 375 LFGQVLIRRLEPSLLTYSS--LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
           L+G++L R  E     YS+  ++ G C  G++ +G  L +     G  P AV        
Sbjct: 261 LYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAV-------- 312

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
                                  +N L+DG CR       + L   M M  I P V+T+ 
Sbjct: 313 ----------------------FYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYG 350

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            +I  +  +  L+    L ++M +RGL+P+V  Y+ +I+ L K ++ S  L +   M  +
Sbjct: 351 AIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVAS 410

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              PD+  +N L+    +E +++ ALKL  +   R LEP+ ++Y  +I G+C
Sbjct: 411 RFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFC 462



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 19/273 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ ++R  K+ ++ +IF +M + G Y        ++     S  + +      +MR
Sbjct: 559 YTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMR 618

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G    EF    L++G  +KG I+ A      +++R   PNIVT   ++   C  G   
Sbjct: 619 KVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTD 678

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  LF  +   G  PNVV ++ LI +  K+ K  +A   +  M+     P+      L+
Sbjct: 679 SAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLV 738

Query: 291 DGLF---------------KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           +GL                +A +     ++    +  GL   +  +++++ +      +G
Sbjct: 739 NGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLG 798

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
           +A++  ++M N G LP+ +++  L+ G    G+
Sbjct: 799 KAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGK 831



 Score = 39.3 bits (90), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 37/180 (20%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  Y  IG  D +  +FA M   G++  P++V   +        +G  +K  +A++
Sbjct: 664 YASLICGYCNIGNTDSAEVLFASMQSEGLF--PNVVHYTVL-------IGSLFKKDKAIQ 714

Query: 175 GKGF-------------CVYEFLMNGLL--RKGVI----ENAFHMHRQ---------VIQ 206
              +                 +L+NGL   R G+I     +    H++         +I 
Sbjct: 715 AAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLIS 774

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P I   N I+  LC +  +G A  L + +   G  P+ VTF +L+  F    K  K
Sbjct: 775 DGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGK 834


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 207/423 (48%), Gaps = 30/423 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++G  +   IE A  +  ++  RGF+P+IVT N ++  LC   ++G A  + D L
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           LL    P V+T++ LI A   E  + +A +L   M+   L+PD+  Y+ +I G+ K G +
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +   EL+ +   +G K DV+ ++ ++ A++  G      +    M + G  PN ++YSIL
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC+ GR+ EA  +   ++ + L P   +Y  LI   CK G+L     + D MI  G 
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
            PD V                               +NT++   C+   A   +++F  +
Sbjct: 379 LPDIVN------------------------------YNTILAALCKNGNANQALEIFNKL 408

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                 P+V ++  +I  + S G  S A+ +   M+ +G+ PD ITY+++I  L +   +
Sbjct: 409 RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLV 468

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              + +   ME++G  P +  YN++L  L K   +D A+ +F ++ ++G  P+  TY  +
Sbjct: 469 EEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILL 528

Query: 600 ICG 602
           I G
Sbjct: 529 IEG 531



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 219/433 (50%), Gaps = 16/433 (3%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N   + G    + +    ++ +G+ P+++ C K++K       I  AS + ++L    
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILE-SH 132

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +P+V  ++ +I+ FCK  ++E A Q+ N M     +PD++ Y+I+I  L    R K G 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSL--CNRRKLG- 189

Query: 304 ELLLTALDRGLKLD-----VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            L L  LD+ L LD     V+ ++ +++A +  G +  A++  + ML  G LP++ +Y+ 
Sbjct: 190 -LALKVLDQ-LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 247

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +I+G+C++G +  A  L   +  +  +P +++Y+ L+  F   GK  +G  L   M  RG
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307

Query: 419 LKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
            +P+ V  S+LI+     G + +A+      +   L P+ + ++ L+   C+  R    +
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +   M      PD++ +  ++  +   G+ + A+ +F ++   G  P+V +Y+ +I  L
Sbjct: 368 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           +   + S  L M   M   GV PD   YN L++ L ++  ++ A+ L   +   G  P +
Sbjct: 428 WSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 487

Query: 594 ITYNTIICGYCSL 606
           I+YN ++ G C +
Sbjct: 488 ISYNIVLLGLCKV 500



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 201/422 (47%), Gaps = 17/422 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  + ++ +I+ + ++   M   G    PD+V    ++  L +   +G   K+   
Sbjct: 140 YNAVISGFCKVNRIEAATQVLNRMKARGFL--PDIVTYNIMIGSLCNRRKLGLALKVLDQ 197

Query: 173 MR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +           Y  L+   + +G I  A  +  +++ RG +P++ T N I++ +C  G 
Sbjct: 198 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 257

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A+ L   L   G KP+V++++ L+ AF  + K ++  +L   M      P+ + YSI
Sbjct: 258 VERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 317

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L + GR+ E   +L   +++ L  D   +  ++ A    G +  A+   D M++ G
Sbjct: 318 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 377

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP++++Y+ ++  LC+ G   +A  +F ++      P++ +Y+++I      G      
Sbjct: 378 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 437

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +   MI +G+ PD +  + LI     +GL+ +A+       +    P +  +N ++ G 
Sbjct: 438 GMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 497

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+++R  D + +F  M     +P+  T+ +LI GI   G  + A+ L   +  R    DV
Sbjct: 498 CKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR----DV 553

Query: 524 IT 525
           I+
Sbjct: 554 IS 555



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 4/171 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           +Y+ ++    + G  ++++EIF  +  MG   +      ++S L       +   +  AM
Sbjct: 384 NYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAM 443

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             KG       Y  L++ L R G++E A  +   + Q GF P +++ N +L  LC   +I
Sbjct: 444 ISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRI 503

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
            +A  +F  ++  G +PN  T+  LI          +A +L N +   D++
Sbjct: 504 DDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 554


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 197/393 (50%), Gaps = 30/393 (7%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G   N  T N ++  LC    I  A S+   +  +G +P+ VTF+TLIN  C E ++++A
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEA 175

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +L+N M   D +P+ + ++IL+D L K G + E   +  T  ++G++ ++  ++++M+ 
Sbjct: 176 VELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNG 235

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y    ++  A + ++ M+  G  P+V SYSILI G C+  R+ EA  L  Q+  + L P+
Sbjct: 236 YCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPN 295

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
            +TY++L+ G C +  L +   L+  M   G                             
Sbjct: 296 TVTYNTLMQGLCHASSLLEAQELFKKMCSSG----------------------------- 326

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            ++PNL  ++ L+DG C+     + +KL   M    ++PD++ + +LI+G+   G L  A
Sbjct: 327 -MLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVA 385

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             LF ++   G+ P V TY+ +I GL K         +F+ ME +G  PD   YNV++  
Sbjct: 386 KELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQG 445

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            ++  +   A++L  ++  R    D  T+  ++
Sbjct: 446 FLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 195/380 (51%), Gaps = 5/380 (1%)

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I +A + F  ++ + P+P+ V     + +  K+ +      L N M    +  +    +I
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+ L +   +     +L      G++ D V F+++++     G +  AV+ ++ M    
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            +PN ++++IL+  LC++G + EA  +F  +  + +EP++ TY++L++G+C   ++ D  
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +++ M+ +G  P     S+LING      + +A     Q     LIPN   +NTLM G 
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C      +  +LF  M    + P++ T+++L+ G+   G L  A+ L   M +R L PD+
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDI 366

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + Y+ +I G+F    + V   +F  +  NG+ P +  YN+++  L+KE   D A KLF +
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426

Query: 584 LTDRGLEPDIITYNTIICGY 603
           + D G  PD  +YN II G+
Sbjct: 427 MEDDGFLPDSCSYNVIIQGF 446



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 169/351 (48%), Gaps = 30/351 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            +  L+NGL  +G I+ A  +  ++  R  +PN VT   ++  LC  G +  A  +F+ +
Sbjct: 158 TFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETM 217

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +PN+ T++ L+N +C   ++  A +++ +M+     P +  YSILI+G  K+ R+
Sbjct: 218 TEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRI 277

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   LL    ++ L  + V ++++M        +  A + + +M + G LPN+ +YSIL
Sbjct: 278 DEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSIL 337

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GLC+ G L EA  L   +  R+LEP ++ Y+ LI G   +GKL     L+  +   G+
Sbjct: 338 LDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGI 397

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           +P     +++I GL+ + L                              + +  KLF  M
Sbjct: 398 RPSVRTYNIMIKGLLKEGL------------------------------SDEAYKLFRKM 427

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
                 PD  ++ V+I+G       S+AI L  +M+ R  + D  T+  ++
Sbjct: 428 EDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 134/282 (47%), Gaps = 33/282 (11%)

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
           +GI D   A+ ++ RM++    P+ +     +  + ++ +      L  Q+ +  +  + 
Sbjct: 65  IGIDD---AMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHND 121

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT 448
            T + LI+  C+   +    S+   M K G++PD+V                        
Sbjct: 122 YTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVT----------------------- 158

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
                  F TL++G C   R  + V+LF  M   +  P+ +T T+L+  +  +G +S A 
Sbjct: 159 -------FTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEAR 211

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +F  M ++G+ P++ TY+A+++G      ++    +F++M   G AP +  Y++L+N  
Sbjct: 212 CVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGY 271

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
            K   +D A  L  Q++++ L P+ +TYNT++ G C  +S L
Sbjct: 272 CKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLL 313



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 4/216 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI  Y +  +IDE+  +   MS+  +  +      LM  L  ++S+ +  +L + M 
Sbjct: 264 YSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMC 323

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L++GL + G +E A  +   + +R   P+IV  N +++ + I G++ 
Sbjct: 324 SSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLE 383

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF  L   G +P+V T++ +I    KE   ++A++L+  M +   +PD   Y+++I
Sbjct: 384 VAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVII 443

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
            G  +        +L+   + R    D   F  ++D
Sbjct: 444 QGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 208/423 (49%), Gaps = 30/423 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++G  +   IE A  +  ++  RGF+P+IVT N ++  LC   ++G A ++ D L
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQL 208

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           LL    P V+T++ LI A   E  + +A +L   M+   L+PD+  Y+ +I G+ K G +
Sbjct: 209 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +   EL+ +   +G + DV+ ++ ++ A++  G      +    M + G  PN ++YSIL
Sbjct: 269 ERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 328

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC+ GR+ EA  +   ++ + L P   +Y  LI   CK G+L     + D MI  G 
Sbjct: 329 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 388

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
            PD V                               +NT++   C+   A   +++F  +
Sbjct: 389 LPDIVN------------------------------YNTILAALCKNGNANQALEIFNKL 418

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                 P+V ++  +I  + S G  S A+ +   M+ +G+ PD ITY+++I  L +   +
Sbjct: 419 RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLV 478

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              + +   ME++G  P +  YN++L  L K   +D A+ +F ++ ++G  P+  TY  +
Sbjct: 479 EEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILL 538

Query: 600 ICG 602
           I G
Sbjct: 539 IEG 541



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 220/433 (50%), Gaps = 16/433 (3%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N   + G    + +    ++ +G+ P+++ C K++K       I  AS + ++L    
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILE-SH 142

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +P+V  ++ +I+ FCK  ++E A Q+ N M     +PD++ Y+I+I  L    R K G 
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSL--CNRRKLG- 199

Query: 304 ELLLTALDRGLKLD-----VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            L LT LD+ L LD     V+ ++ +++A +  G +  A++  + ML  G LP++ +Y+ 
Sbjct: 200 -LALTVLDQ-LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 257

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           +I+G+C++G +  A  L   +  +  EP +++Y+ L+  F   GK  +G  L   M  RG
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317

Query: 419 LKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
            +P+ V  S+LI+     G + +A+      +   L P+ + ++ L+   C+  R    +
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +   M      PD++ +  ++  +   G+ + A+ +F ++   G  P+V +Y+ +I  L
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           +   + S  L M   M   G+ PD   YN L++ L ++  ++ A+ L   +   G  P +
Sbjct: 438 WSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 497

Query: 594 ITYNTIICGYCSL 606
           I+YN ++ G C +
Sbjct: 498 ISYNIVLLGLCKV 510



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 200/422 (47%), Gaps = 17/422 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ +I  + ++ +I+ + ++   M   G    PD+V    ++  L +   +G    +   
Sbjct: 150 YNAVISGFCKVNQIEAATQVLNRMKARGFL--PDIVTYNIMIGSLCNRRKLGLALTVLDQ 207

Query: 173 MR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +           Y  L+   + +G I  A  +  +++ RG +P++ T N I++ +C  G 
Sbjct: 208 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 267

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A+ L   L   G +P+V++++ L+ AF  + K ++  +L   M      P+ + YSI
Sbjct: 268 VERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 327

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L + GR+ E   +L   +++ L  D   +  ++ A    G +  A+   D M++ G
Sbjct: 328 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 387

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP++++Y+ ++  LC+ G   +A  +F ++      P++ +Y+++I      G      
Sbjct: 388 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 447

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +   MI +G+ PD +  + LI     +GL+ +A+       +    P +  +N ++ G 
Sbjct: 448 GMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 507

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+++R  D + +F  M     +P+  T+ +LI GI   G  + A+ L   +  R    DV
Sbjct: 508 CKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR----DV 563

Query: 524 IT 525
           I+
Sbjct: 564 IS 565



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 4/171 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           +Y+ ++    + G  ++++EIF  +  MG   +      ++S L       +   +  AM
Sbjct: 394 NYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAM 453

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             KG       Y  L++ L R G++E A  +   + Q GF P +++ N +L  LC   +I
Sbjct: 454 ISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRI 513

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
            +A  +F  ++  G +PN  T+  LI          +A +L N +   D++
Sbjct: 514 DDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 564


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 221/415 (53%), Gaps = 6/415 (1%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           I++ F ++ Q+I  G +P++VTC+ IL  LC +G++  A+ L   +  +G  PN V+++T
Sbjct: 252 IDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTT 311

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +I+A  K  ++ +AF   + M+   +  DL++ + ++DGLFKAG+ KE  E+  T L   
Sbjct: 312 IISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLN 371

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L  + V +++++D +  +GDV  A     +M     LPNV+++S +I G  ++G L +A 
Sbjct: 372 LVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAV 431

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            +  +++   + P++  Y+ L+DG+ ++G+       Y  M   GL+ + ++  +L+N L
Sbjct: 432 EVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNL 491

Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                M +A       +   +  ++F +++LMDG  +    +  + +   M   +++ DV
Sbjct: 492 KRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDV 551

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           + +  L +G+   G       +F +M++ GLTPD +TY+++++  F        L +   
Sbjct: 552 VAYNALTKGLLRLGKYEPKS-VFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNE 610

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           M+  GV P++  YN+L+  L K   ++  + +  ++   G  P  I +  ++  Y
Sbjct: 611 MKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAY 665



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 151/601 (25%), Positives = 256/601 (42%), Gaps = 118/601 (19%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFCVY 181
           R GK+ E+  +   M +MG  L P+ V    ++S L+ S  V + +     M  +G  + 
Sbjct: 283 RHGKLTEAAMLLREMYNMG--LDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISID 340

Query: 182 EFL----MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
             L    M+GL + G  + A  M + +++   VPN VT   +L   C  G +  A ++  
Sbjct: 341 LVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQ 400

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK-- 295
            +      PNVVTFS++IN + K+  L KA ++   M++M+++P++ +Y+IL+DG F+  
Sbjct: 401 KMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTG 460

Query: 296 ---------------------------------AGRLKEGNELLLTALDRGLKLDVVVFS 322
                                            +G +KE   L+   L +G+ LDV  +S
Sbjct: 461 QHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYS 520

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ----------------- 365
           S+MD Y   G+   A+     M       +V++Y+ L KGL +                 
Sbjct: 521 SLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELG 580

Query: 366 -----------------QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
                            QG+   A  L  ++    + P+++TY+ LI G CK+G +    
Sbjct: 581 LTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVI 640

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL----MGDA-LRFFFQSVRMTLIPNLFIFNTLMDGC 463
           S+   M+  G  P  ++   L+         DA L+   + V M L  N  ++NTL+   
Sbjct: 641 SVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVL 700

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           CRL        +   M +  I  D++T+  LIRG  +   +  A   + QML  G++P++
Sbjct: 701 CRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNI 760

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL------------------ 565
            TY+A++ GL     +     +   M   G+ P+   YN+L+                  
Sbjct: 761 TTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCE 820

Query: 566 -------------NMLI----KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
                        N+LI    K   +  A +L  ++  RG  P+  TY+ +ICG+C L S
Sbjct: 821 MITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKL-S 879

Query: 609 C 609
           C
Sbjct: 880 C 880



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 218/446 (48%), Gaps = 27/446 (6%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL--- 240
           L++G    G++  A  +     + G  P+IVT N ++   C  G +  A S+ + +L   
Sbjct: 151 LVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFR 210

Query: 241 ------------------LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
                             L   +P VVT++TLI A+CK   ++  F LY  M+   ++PD
Sbjct: 211 RDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPD 270

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           ++  S ++ GL + G+L E   LL    + GL  + V +++++ A +  G V  A     
Sbjct: 271 VVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQS 330

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           +M+  G   +++  + ++ GL + G+  EA  +F  +L   L P+ +TY++L+DG CK G
Sbjct: 331 QMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVG 390

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFN 457
            +    ++   M K  + P+ V  S +IN     G++  A+    + V+M ++PN+F++ 
Sbjct: 391 DVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYA 450

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            L+DG  R  +       +  M  + ++ + I   +L+  +   G +  A  L   +L +
Sbjct: 451 ILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSK 510

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G+  DV  YS+++ G FK  N S  L + + M    +  D+  YN L   L++    +  
Sbjct: 511 GIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPK 570

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGY 603
             +F ++ + GL PD +TYN+++  Y
Sbjct: 571 -SVFSRMIELGLTPDCVTYNSVMNTY 595



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 229/464 (49%), Gaps = 37/464 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++ G  ++G+ +  F +  +++++G   + VTCN ++K  C  G +  A  +   L
Sbjct: 77  TYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNL 136

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G   + +  +TL++ +C+   + +A  L     +  + PD++ Y+ L++   K G L
Sbjct: 137 VGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDL 196

Query: 300 KEG----NELLLTALD-----------------RGLKLDVVVFSSVMDAYVGIGDVGRAV 338
            +     NE+L    D                 R L+  VV +++++ AY     +    
Sbjct: 197 AKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFF 256

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
             Y++M+  G +P+V++ S ++ GLC+ G+L EA  L  ++    L+P+ ++Y+++I   
Sbjct: 257 SLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISAL 316

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNL 453
            KSG++ + F+    M+ RG+  D V+C+ +++GL       +A   F   +++ L+PN 
Sbjct: 317 LKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNC 376

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +  L+DG C++        +   M   ++ P+V+T + +I G A +G L+ A+ +  +
Sbjct: 377 VTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRK 436

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M++  + P+V  Y+ ++ G F+          +K M+  G+  +  I+++LLN L +   
Sbjct: 437 MVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGG 496

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
           +  A  L   +  +G+  D+  Y           S L+DGYFK 
Sbjct: 497 MKEAQSLIKDILSKGIYLDVFNY-----------SSLMDGYFKE 529



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 236/501 (47%), Gaps = 12/501 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ LI  Y +   ID+   ++  M   G+   PD+V    ++  L     + +   L R 
Sbjct: 239 WTTLIAAYCKHRGIDDFFSLYEQMIMSGVM--PDVVTCSSILYGLCRHGKLTEAAMLLRE 296

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M   G       Y  +++ LL+ G +  AF+   Q++ RG   ++V C  ++  L   G+
Sbjct: 297 MYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGK 356

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +F  +L +   PN VT++ L++  CK   +E A  +   M +  ++P+++ +S 
Sbjct: 357 SKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSS 416

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+G  K G L +  E+L   +   +  +V V++ ++D Y   G    A   Y  M + G
Sbjct: 417 IINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWG 476

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N I + IL+  L + G + EA  L   +L + +   +  YSSL+DG+ K G      
Sbjct: 477 LEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAAL 536

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           S+   M ++ ++ D V  + L  GL+     +    F + + + L P+   +N++M+   
Sbjct: 537 SVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYF 596

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
              +  + + L   M  Y + P+++T+ +LI G+   G++   I +  +ML  G  P  I
Sbjct: 597 IQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPI 656

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            +  ++    + +     L + K +   G+  +  +YN L+ +L +      A  +  ++
Sbjct: 657 IHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEM 716

Query: 585 TDRGLEPDIITYNTIICGYCS 605
             +G+  DI+TYN +I GYC+
Sbjct: 717 VIKGISADIVTYNALIRGYCT 737



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 228/469 (48%), Gaps = 57/469 (12%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA-----SS 234
           +YEF  +G + +  +     ++ +++  G VPN+ + N ++  LC  G +G A     +S
Sbjct: 17  LYEFNASGFVSQVKV-----LYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNS 71

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +FD           VT++T++  FCK    ++ F L + M++  +  D +  +IL+ G  
Sbjct: 72  VFD----------HVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYC 121

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + G ++    ++   +  G+ LD +  ++++D Y  +G V RA+   +     G  P+++
Sbjct: 122 QIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIV 181

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVL---------------------IRRLEPSLLTYSS 393
           +Y+ L+   C++G L +A  +  ++L                     +R L+P+++T+++
Sbjct: 182 TYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTT 241

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           LI  +CK   + D FSLY+ MI  G+ PD V CS ++ GL     + +A     +   M 
Sbjct: 242 LIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMG 301

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           L PN   + T++    +  R  +       M +  I  D++  T ++ G+   G    A 
Sbjct: 302 LDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAE 361

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            +F  +LK  L P+ +TY+A++ G  K  ++     + + ME+  V P++  ++ ++N  
Sbjct: 362 EMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGY 421

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
            K+  L+ A+++  ++    + P++  Y           + L+DGYF++
Sbjct: 422 AKKGMLNKAVEVLRKMVQMNIMPNVFVY-----------AILLDGYFRT 459



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 186/425 (43%), Gaps = 35/425 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  L+ N  R G + E+  +   +   GIYL       LM       +      + + M 
Sbjct: 484 FDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMT 543

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K        Y  L  GLLR G  E      R +I+ G  P+ VT N ++    I G+  
Sbjct: 544 EKDMQFDVVAYNALTKGLLRLGKYEPKSVFSR-MIELGLTPDCVTYNSVMNTYFIQGKTE 602

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA  L + +   G  PN+VT++ LI   CK   +EK   + + M+ +  VP  II+  L+
Sbjct: 603 NALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLL 662

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
               ++ +     ++    +D GL L+ +V+++++     +G   +A      M+  G  
Sbjct: 663 KAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGIS 722

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            ++++Y+ LI+G C    + +A   + Q+L+  + P++ TY++L++G   +G +RD   L
Sbjct: 723 ADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKL 782

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              M +RGL P+A                                +N L+ G  R+    
Sbjct: 783 VSEMRERGLVPNATT------------------------------YNILVSGHGRVGNKR 812

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D++KL+  M      P   T+ VLI+  A  G +  A  L  +ML RG  P+  TY  +I
Sbjct: 813 DSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLI 872

Query: 531 HGLFK 535
            G  K
Sbjct: 873 CGWCK 877



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 182/403 (45%), Gaps = 44/403 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L +  +R+GK  E   +F+ M ++G  L+PD V                        
Sbjct: 554 YNALTKGLLRLGKY-EPKSVFSRMIELG--LTPDCV------------------------ 586

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  +MN    +G  ENA  +  ++   G +PN+VT N ++  LC  G I    S
Sbjct: 587 -----TYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVIS 641

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +L VG  P  +    L+ A+ +  K +   Q++  +++M L  + ++Y+ LI  L 
Sbjct: 642 VLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLC 701

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + G  K+ N +L   + +G+  D+V +++++  Y     V +A  TY +ML  G  PN+ 
Sbjct: 702 RLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNIT 761

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ L++GL   G + +A  L  ++  R L P+  TY+ L+ G  + G  RD   LY  M
Sbjct: 762 TYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEM 821

Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           I +G  P     ++LI      G M  A     + +    IPN   ++ L+ G C+L   
Sbjct: 822 ITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQ 881

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
            +  +L  L      K        L+R +  +G + S   L +
Sbjct: 882 PEMDRLLKLSYQNEAKK-------LLREMCEKGHVPSESTLMY 917



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 184/398 (46%), Gaps = 14/398 (3%)

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
            VP++   N +L     +G +     L+  ++L G  PNV + + L+++ CK   L  A 
Sbjct: 6   LVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLAL 65

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
                    + V D + Y+ ++ G  K G   +G  LL   + +G+  D V  + ++  Y
Sbjct: 66  GYLR-----NSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGY 120

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             IG V  A      ++ GG   + I  + L+ G C+ G +  A  L        ++P +
Sbjct: 121 CQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDI 180

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT 448
           +TY++L++ FCK G L    S+ + ++  G + D        +G++ D     +  +R  
Sbjct: 181 VTYNTLVNAFCKRGDLAKAESVVNEIL--GFRRDDE------SGVLNDCGVETWDGLR-D 231

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           L P +  + TL+   C+ +   D   L+  M M  + PDV+T + ++ G+   G L+ A 
Sbjct: 232 LQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAA 291

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           +L  +M   GL P+ ++Y+ II  L K   +    +    M   G++ D+ +   +++ L
Sbjct: 292 MLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGL 351

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            K      A ++F  +    L P+ +TY  ++ G+C +
Sbjct: 352 FKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKV 389



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 33/258 (12%)

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           L PSL  ++ L+  F  SG +     LY  M+  G+ P+    +LL++ L     +G AL
Sbjct: 6   LVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLAL 65

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
            +   SV      +   +NT++ G C+   A     L   M    +  D +T  +L++G 
Sbjct: 66  GYLRNSVF-----DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGY 120

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G +  A  +   ++  G+  D I  + ++ G  +   +S  L + +   +NGV PDI
Sbjct: 121 CQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDI 180

Query: 559 AIYNVLLNMLIKECNLDAALKLF------------GQLTD---------RGLEPDIITYN 597
             YN L+N   K  +L  A  +             G L D         R L+P ++T+ 
Sbjct: 181 VTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWT 240

Query: 598 TIICGYCSLNSCLIDGYF 615
           T+I  YC      ID +F
Sbjct: 241 TLIAAYCKHRG--IDDFF 256


>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 562

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 179/335 (53%), Gaps = 18/335 (5%)

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           R+V  +   PN+V  N I+  +C +    +A  L+  ++     P+V T++ LIN FC  
Sbjct: 230 RRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIV 289

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
            KL+ A  L+N M   ++ PD+  ++IL+D   K GR+KE    L   + +G+K DVV +
Sbjct: 290 GKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTY 349

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           +S+MD Y  + +V +A   ++ M + G   NV SYSI+I   C+   + +A  LF ++  
Sbjct: 350 NSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHH 409

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           +++ P+++TYSSLIDG CKSG++     L D M  RG +PD +    L   L    +R  
Sbjct: 410 KQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIIT---LTRQLKDQGIR-- 464

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF--MLMGMYNIKPDVITHTVLIRGIA 499
                    PN+F +  L+DG C+  R  D   +F  +L+  YNI   V T+TV+I G  
Sbjct: 465 ---------PNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNIT--VNTYTVMIHGFC 513

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           ++G    A+ L  +M      P+ +TY  II  LF
Sbjct: 514 NKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLF 548



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 167/317 (52%), Gaps = 30/317 (9%)

Query: 168 KLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
           +L R + GK       +Y  +++ + +  +  +AF ++ +++ +   P++ T N ++   
Sbjct: 227 QLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGF 286

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
           CI G++ +A  LF+ +      P+V TF+ L++AFCKE ++++A     +MM+  + PD+
Sbjct: 287 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDV 346

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + Y+ L+D       + +   +  T   RG+  +V  +S +++ +  I  V +A++ +  
Sbjct: 347 VTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKE 406

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV-----------LIRRLE-----PS 387
           M +    PNVI+YS LI GLC+ GR+  A  L  ++           L R+L+     P+
Sbjct: 407 MHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPN 466

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
           + TY+ LIDG CK G+L D  +++++++ +G        +++I+G     L  F ++  M
Sbjct: 467 MFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGL--FDEA--M 522

Query: 448 TLIPNLFIFNTLMDGCC 464
           TL+      + + D CC
Sbjct: 523 TLL------SKMKDNCC 533



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 167/336 (49%), Gaps = 27/336 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS--CLVDS--NSVGQYYKLC 170
           Y+ +I++  +    +++ ++++ M    I+   +    L++  C+V    +++G + K+ 
Sbjct: 244 YNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMT 303

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     +  L++   ++G ++ A +    ++++G  P++VT N ++ R C+  ++ 
Sbjct: 304 SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVN 363

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+F+ +   G   NV ++S +IN FCK   +++A +L+  M    + P++I YS LI
Sbjct: 364 KAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLI 423

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DGL K+GR+    EL     DRG + D++  +                    ++ + G  
Sbjct: 424 DGLCKSGRISYALELNDEMHDRGQQPDIITLTR-------------------QLKDQGIR 464

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN+ +Y+ILI GLC+ GRL +A  +F  +L++    ++ TY+ +I GFC  G   +  +L
Sbjct: 465 PNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTL 524

Query: 411 YDNMIKRGLKPDAVVCSLLINGLM----GDALRFFF 442
              M      P+AV   ++I  L      D    FF
Sbjct: 525 LSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFF 560



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 164/358 (45%), Gaps = 56/358 (15%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +PN+V ++T+I++ CK+     AF LY+ M+   + PD+  Y+ LI+G            
Sbjct: 238 QPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALING------------ 285

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
                                  +  +G +  A+  +++M +    P+V +++IL+   C
Sbjct: 286 -----------------------FCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFC 322

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           ++GR+ EA      ++ + ++P ++TY+SL+D +C   ++    S+++ M  RG+  +  
Sbjct: 323 KEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVR 382

Query: 425 VCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT--------- 470
             S++IN      ++  A++ F +     + PN+  +++L+DG C+  R +         
Sbjct: 383 SYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEM 442

Query: 471 -------DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
                  D + L   +    I+P++ T+T+LI G+   G L  A  +F  +L +G    V
Sbjct: 443 HDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITV 502

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
            TY+ +IHG          + +   M+ N   P+   Y +++  L      D A   F
Sbjct: 503 NTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFF 560



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 153/308 (49%), Gaps = 21/308 (6%)

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L+ ++V++++++D+         A   Y  M++    P+V +Y+ LI G C  G+L +A 
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
           GLF ++    + P + T++ L+D FCK G++++  +    M+K+G+KPD V  + L++  
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356

Query: 432 ---GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                +  A   F       +  N+  ++ +++  C++K     +KLF  M    I P+V
Sbjct: 357 CLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNV 416

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT----------------YSAIIHG 532
           IT++ LI G+   G +S A+ L  +M  RG  PD+IT                Y+ +I G
Sbjct: 417 ITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDG 476

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L KG  +    ++F+ +   G    +  Y V+++    +   D A+ L  ++ D    P+
Sbjct: 477 LCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPN 536

Query: 593 IITYNTII 600
            +TY  II
Sbjct: 537 AVTYEIII 544



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 365 QQGRLVEACGLFGQVLIRR-----LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +QG L +   L    L+RR     L+P+L+ Y+++ID  CK     D F LY  M+ + +
Sbjct: 216 EQGSLSQRAPL---QLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRI 272

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    + LING      + DA+  F +     + P+++ FN L+D  C+  R  +   
Sbjct: 273 FPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKN 332

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
              +M    IKPDV+T+  L+        ++ A  +F  M  RG+T +V +YS +I+   
Sbjct: 333 GLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFC 392

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K K +   + +FK M    + P++  Y+ L++ L K   +  AL+L  ++ DRG +PDII
Sbjct: 393 KIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDII 452

Query: 595 T 595
           T
Sbjct: 453 T 453



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 4/160 (2%)

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           L PNL ++NT++D  C+ K   D   L+  M    I PDV T+  LI G    G L  AI
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM- 567
            LF +M    + PDV T++ ++    K   +    +   +M + G+ PD+  YN L++  
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356

Query: 568 -LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            L+ E N   A  +F  ++ RG+  ++ +Y+ +I  +C +
Sbjct: 357 CLVNEVN--KAKSIFNTMSHRGVTANVRSYSIMINRFCKI 394



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 68/125 (54%)

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           ++P+++ +  +I  +      + A  L+ +M+ + + PDV TY+A+I+G      +   +
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            +F  M    + PD+  +N+L++   KE  +  A      +  +G++PD++TYN+++  Y
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356

Query: 604 CSLNS 608
           C +N 
Sbjct: 357 CLVNE 361



 Score = 38.5 bits (88), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 15/62 (24%), Positives = 37/62 (59%)

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           L + + ++   + P++ +YN +++ + K+   + A  L+ ++  + + PD+ TYN +I G
Sbjct: 226 LQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALING 285

Query: 603 YC 604
           +C
Sbjct: 286 FC 287


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 197/383 (51%), Gaps = 8/383 (2%)

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
           LR   +E ++  + +V+  G+ PN    N ++   C  G +G+A  +FD +   G +P V
Sbjct: 118 LRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTV 177

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           V+F+TLI+  CK   +E+ F+L  +M    + PD+  +S LI+GL K GRL EG+ L   
Sbjct: 178 VSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDE 237

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
              +GL  + V F+ ++D     G V  A++ +  ML  G  P++++Y+ LI GLC+ G 
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 297

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           L EA  L  ++    L P  +T+++LIDG CK G +     +   M++ G++ D V  ++
Sbjct: 298 LKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTV 357

Query: 429 LINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LI+GL     + DA R     +     P+   +  ++D  C+        KL   M    
Sbjct: 358 LISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDG 417

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
             P V+T+  L+ G+  QG + +A +L   ML  G+ P+ ITY+ ++ G  K    SV +
Sbjct: 418 HVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSK-HGSSVDV 476

Query: 544 HMFKLMERNGVAPDIAIYNVLLN 566
            +F      G+  D A Y  L+N
Sbjct: 477 DIFN--SEKGLVKDYASYTALVN 497



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 181/364 (49%), Gaps = 5/364 (1%)

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
           +  +LE+++  Y  +++    P+   +++L+ G  K G +     +      RGL+  VV
Sbjct: 119 RPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVV 178

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            F++++      G V    +    M +    P+V ++S LI GLC++GRL E   LF ++
Sbjct: 179 SFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 238

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
             + L P+ +T++ LIDG CK GK+      +  M+ +G++PD V  + LINGL     +
Sbjct: 239 CGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 298

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A R   +     L P+   F TL+DGCC+       +++   M    I+ D +  TVL
Sbjct: 299 KEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVL 358

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I G+   G +  A  +   ML  G  PD  TY+ ++    K  N+ +G  + K M+ +G 
Sbjct: 359 ISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGH 418

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGY 614
            P +  YN L+N L K+  +  A  L   + + G+ P+ ITYN ++ G+    S +    
Sbjct: 419 VPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDI 478

Query: 615 FKSQ 618
           F S+
Sbjct: 479 FNSE 482



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 171/351 (48%), Gaps = 33/351 (9%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           +  L++G  + G +E  F +   +      P++ T + ++  LC  G++   S LFD + 
Sbjct: 180 FNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMC 239

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  PN VTF+ LI+  CK  K++ A + + +M+   + PDL+ Y+ LI+GL K G LK
Sbjct: 240 GKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLK 299

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   L+      GL+ D + F++++D     GD+  A++   RM+  G   + +++++LI
Sbjct: 300 EARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLI 359

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC+ GR+ +A  +   +L    +P   TY+ ++D FCK G +  GF L   M   G  
Sbjct: 360 SGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHV 419

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           P  V                               +N LM+G C+  +  +   L   M 
Sbjct: 420 PGVVT------------------------------YNALMNGLCKQGQVKNAKMLLDAML 449

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              + P+ IT+ +L+ G +  GS S  + +F    ++GL  D  +Y+A+++
Sbjct: 450 NVGVAPNDITYNILLEGHSKHGS-SVDVDIFNS--EKGLVKDYASYTALVN 497



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 13/156 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI    R G++ ++  +   M   G          ++ C     +V   +KL + M+
Sbjct: 355 FTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQ 414

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  LMNGL ++G ++NA  +   ++  G  PN +T N +L+     G   
Sbjct: 415 SDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLE-----GHSK 469

Query: 231 NASSLFDVLLLVGPK---PNVVTFSTLINAFCKEAK 263
           + SS+ DV +    K    +  +++ L+N   K +K
Sbjct: 470 HGSSV-DVDIFNSEKGLVKDYASYTALVNESSKTSK 504


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 215/432 (49%), Gaps = 8/432 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  L+N  +++ + + A  +  ++      P I  CN +LK L  + Q+  A      +
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G   N    S  I+ +C +  ++  ++L   M  + + PD++ Y+I+ID L K   L
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE   +L      G+ LD V  SSV+D Y     VG++ +  D +      PN+  ++  
Sbjct: 273 KEATSILFKMTQMGVFLDSVSVSSVVDGYC---KVGKSEEAMDVLEVFNLSPNIFVFNSF 329

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC  G +++A  +F  +    L P   +Y++++ G+CK   + +       M+KRG+
Sbjct: 330 ISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGI 389

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           +P     +LLI+     G M  A   F + +   L+P++  +NTLM+G  +        +
Sbjct: 390 RPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFE 449

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L  +M    + PD++T+ +LI G+  +G ++ A  +  ++ +RG +PDV+T++ II G  
Sbjct: 450 LLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFS 509

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
              N      +F  M  + + PD+   + LLN   +   +  A  LF ++ D GL+ D+I
Sbjct: 510 NKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVI 569

Query: 595 TYNTIICGYCSL 606
            YN++I G+CSL
Sbjct: 570 LYNSLIHGFCSL 581



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/588 (23%), Positives = 266/588 (45%), Gaps = 49/588 (8%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ----LIHVLLQSDMR----DV 82
           QFN    +     ++ +   A+ FF+W+  C+ S +  +    +IH+L+  +M     D+
Sbjct: 60  QFNVMKILNDLFEESTDAALALYFFRWSEYCMGSKHTVESVCTMIHILVSGNMNHKAMDL 119

Query: 83  ASHVFDKMVIQFGKTYNFFRLFRDSLGD--FGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
             H+      + G    F ++             Y  L+  YV+      ++++   M  
Sbjct: 120 LLHLISYNSGEEGWHNIFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLICKMRH 179

Query: 141 MGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHM 200
           + I+    +   L+  L++S  +   +   + M+ +G                       
Sbjct: 180 LNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGL---------------------- 217

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
                  G   +I++    +   C  G I     L   +  +G KP+VV ++ +I++ CK
Sbjct: 218 -------GLNASIISL--FISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCK 268

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
            + L++A  +   M +M +  D +  S ++DG  K G+ +E  ++L       L  ++ V
Sbjct: 269 MSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFV 325

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           F+S +      G++ +A + +  M   G +P+  SY+ ++ G C+   +  A    G++L
Sbjct: 326 FNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKML 385

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA-LR 439
            R + PS+ TY+ LID  CK G +     L+  MI  GL PD V  + L+NG      L+
Sbjct: 386 KRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQ 445

Query: 440 FFFQSVRMT----LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
             F+ + M     + P+L  +N L+ G  +     +   +   +      PDV+T T +I
Sbjct: 446 KAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNII 505

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G +++G+   A LLFF M +  L PDV+T SA+++G  + + ++    +F  M   G+ 
Sbjct: 506 GGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLK 565

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            D+ +YN L++      N+D A  L   + + G+ P+ IT++ ++ GY
Sbjct: 566 ADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGY 613



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 144/307 (46%), Gaps = 12/307 (3%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----C 179
           G + ++ ++F  M +MG  L PD      +M+       +    K    M  +G      
Sbjct: 337 GNMLKAAKVFQDMCEMG--LIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVA 394

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++   + G +E A ++ +++I  G VP++V+ N ++      G +  A  L  ++
Sbjct: 395 TYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMM 454

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P++VT++ LI+   K   + +A  + + +      PD++ ++ +I G    G  
Sbjct: 455 RSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNF 514

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           +E   L     +  L+ DVV  S++++ Y     +  A   + +ML+ G   +VI Y+ L
Sbjct: 515 EEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSL 574

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK----SGKLRDGFSLYDNMI 415
           I G C  G + +AC L   ++   + P+ +T+ +L+ G+ K    +   R  F L   ++
Sbjct: 575 IHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKKCVENPVERAAFKLQQLLL 634

Query: 416 KRGLKPD 422
           K G++ +
Sbjct: 635 KYGIQAE 641


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 244/539 (45%), Gaps = 45/539 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL-CRAM 173
           Y+ +I+   R G+ID +  + A +   GI  +      LM  L  S  V + ++L  R +
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 174 RGK---GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            G+       +  L+NGL R         + +++   G  PN V  N+++   C  G   
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM--------------- 275
            A  LFD ++  G K  VVT++ +  A CKE ++E A Q+ + M+               
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 276 --------EMDLV-------------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
                    +D+V             P+  + +  I  L K G+ +E  E+    L +GL
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
            +++   ++++       ++  A +    M++ G   + I+Y+I+I+  C+  ++ EA  
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQ 518

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           L   ++ R  +P L T+++ +  +C  GK+ D   L D M   GLKPD V    +I+G  
Sbjct: 519 LRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYC 578

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               +  A ++  + ++  L PN  I+N L+ G  R    +D + +   M    I+P  I
Sbjct: 579 KAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPI 638

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+  L+  +   G +  A  +F Q + + +   VI Y+ II G  K   I   +  FK M
Sbjct: 639 TYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 698

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
               + P+   Y  L+    K  N + A KLF ++   G+ PD ++YNT+I G C ++S
Sbjct: 699 HYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDS 757



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 237/493 (48%), Gaps = 13/493 (2%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGF----C 179
           G++D + ++F  M D G  ++PD+     ++  L  +  +   + +   +   G      
Sbjct: 194 GQLDLARKVFGEMRD-GNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVV 252

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  LM+ L R G +E AF +  ++++    P+IVT   ++  L    + G   ++   +
Sbjct: 253 TYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEM 312

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  PN V ++ LI   C+E    +A +L++ M+   +   ++ Y+++   L K G +
Sbjct: 313 EGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEM 372

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYV-GIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +   ++L   L  G+ +   +F+SV+  ++ G G +   ++    M+     PN    + 
Sbjct: 373 EHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTA 432

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
            I+ LC++G+  EA  ++  VL + L  ++ T ++LI G C+   +++   +   M+  G
Sbjct: 433 CIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSG 492

Query: 419 LKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           ++ D +  +++I        M +A++     ++    P+LF FNT +   C L +  D +
Sbjct: 493 VEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDIL 552

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L   M    +KPD++T+  +I G      +  A     +++K GL P+ + Y+A+I G 
Sbjct: 553 HLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGY 612

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            +  +IS  + +   M+ NG+ P    YN L+  +     ++ A ++F Q   + +E  +
Sbjct: 613 GRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGV 672

Query: 594 ITYNTIICGYCSL 606
           I Y  II G+C +
Sbjct: 673 IGYTIIIQGFCKI 685



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/518 (23%), Positives = 238/518 (45%), Gaps = 49/518 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++   R G+++E+ ++   M +    L P +V    L++ L      G+   + + 
Sbjct: 254 YNVLMDALCRSGRVEEAFQLKGRMVEG--RLRPSIVTFGILINGLARGQRFGEVDAVLQE 311

Query: 173 MRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G G    E + N L+    R+G    A  +  +++ +G    +VT N I K LC  G+
Sbjct: 312 MEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGE 371

Query: 229 IGNASSLFDVLLLVGP------------------------------------KPNVVTFS 252
           + +A  + D +LL G                                     KPN    +
Sbjct: 372 MEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMT 431

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
             I   CK  K E+A +++ L++   L  ++   + LI GL +   +KE  ++L   +D 
Sbjct: 432 ACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDS 491

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G++ D + ++ ++        +  A+Q  D M+  GF P++ +++  ++  C  G++ + 
Sbjct: 492 GVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDI 551

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-- 430
             L  Q+    L+P ++TY ++IDG+CK+  +         +IK GL+P+AV+ + LI  
Sbjct: 552 LHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGG 611

Query: 431 ---NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
              NG + DA+          + P    +N+LM   C      +  ++F    + NI+  
Sbjct: 612 YGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELG 671

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           VI +T++I+G    G +  A++ F +M  R + P+ +TY+ +++   K  N      +F 
Sbjct: 672 VIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFD 731

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            M  +G+ PD   YN L++   +  +LD  ++   +++
Sbjct: 732 EMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMS 769



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 211/479 (44%), Gaps = 77/479 (16%)

Query: 203 QVIQRGFVPNIVTCN------------------------------------KILKRLCIN 226
           ++  RG  P+I TCN                                     ++K LC  
Sbjct: 170 ELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRA 229

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+I  A  +   L   G +P VVT++ L++A C+  ++E+AFQL   M+E  L P ++ +
Sbjct: 230 GEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTF 289

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            ILI+GL +  R  E + +L      G+  + V+++ ++  +   G    A++ +D M++
Sbjct: 290 GILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVS 349

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEA---------------CGLFGQV------------ 379
            G    V++Y+++ K LC++G +  A               C LF  V            
Sbjct: 350 KGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLD 409

Query: 380 ----LIRR-----LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
               LIR      L+P+    ++ I   CK GK  +   ++  ++ +GL  +    + LI
Sbjct: 410 VVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALI 469

Query: 431 NGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           +GL     M +A +     V   +  +   +N ++  CC+  +  + ++L   M     K
Sbjct: 470 HGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFK 529

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           PD+ T    +R   + G +   + L  QM   GL PD++TY  II G  K K++      
Sbjct: 530 PDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKY 589

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              + +NG+ P+  IYN L+    +  ++  A+ +   +   G++P  ITYN+++   C
Sbjct: 590 LIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMC 648



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 143/319 (44%), Gaps = 42/319 (13%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ------------- 378
           G +  A   +  +   G  P++ + +IL++ L   G+L  A  +FG+             
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 379 --VLIRRL---------------------EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
             V+I+ L                     +P+++TY+ L+D  C+SG++ + F L   M+
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 416 KRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +  L+P  V   +LINGL      G+      +     + PN  I+N L+   CR    +
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + ++LF  M    IK  V+T+ ++ + +  +G +  A  +  +ML  G+T     +++++
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 531 HGLFKGK-NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
               +G   + V L + + M    + P+ A+    +  L K    + A +++  +  +GL
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 590 EPDIITYNTIICGYCSLNS 608
             +I T N +I G C  N+
Sbjct: 459 GVNIATSNALIHGLCQGNN 477



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 128/324 (39%), Gaps = 65/324 (20%)

Query: 70  LIHVLLQSDMRDVASHVFDKMV---IQFGK-TYNFFRLF-------------RDSLGDFG 112
           LIH L Q +    A+ V   MV   ++F + TYN    F             RD +   G
Sbjct: 468 LIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG 527

Query: 113 CD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQ 165
                  ++  +  Y  +GK+++ + +   M   G  L PD+V    ++     +  V +
Sbjct: 528 FKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEG--LKPDIVTYGTIIDGYCKAKDVHK 585

Query: 166 YYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
             K    +   G      +Y  L+ G  R G I +A  +   +   G  P  +T N ++ 
Sbjct: 586 ANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMY 645

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            +C  G +  A  +F   +L   +  V+ ++ +I  FCK  K+++A   +  M   D+ P
Sbjct: 646 WMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRP 705

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           + + Y+ L+    K G  +E                                   A + +
Sbjct: 706 NKMTYTTLMYAYCKCGNKEE-----------------------------------AFKLF 730

Query: 342 DRMLNGGFLPNVISYSILIKGLCQ 365
           D M++ G +P+ +SY+ LI G C+
Sbjct: 731 DEMVSSGIVPDTVSYNTLISGCCE 754


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 237/509 (46%), Gaps = 19/509 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           +I  Y ++G  + +VE+F  + + G   S  +   ++  L+  N +   Y + R M+  G
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
           F      Y  L+  L +   ++ A  +  ++  +G  P+ V+   ++  +C  G +    
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L +       +P V  ++ LIN  CKE   + AF+L   M+E  + P++I YS LI+ L
Sbjct: 237 ELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-GFLPN 352
             +G+++     L   L RG   ++   SS++      G    A+  +++M+ G G  PN
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPN 351

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V++Y+ L++G C  G +V+A  +F  +      P++ TY SLI+GF K G L     +++
Sbjct: 352 VVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWN 411

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M+  G  P+ VV + ++  L       +A        +    P++  FN  + G C   
Sbjct: 412 KMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 471

Query: 468 RATDTVKLFMLMGM-YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
           R     K+F  M   +   P+++T+  L+ G+A    +  A  L  ++  RG+     TY
Sbjct: 472 RLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTY 531

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT- 585
           + ++HG        + L +   M  +G +PD    N+++    K+   + A ++   ++ 
Sbjct: 532 NTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSC 591

Query: 586 -DRGLEPDIITYNTIICGYCSLNSCLIDG 613
             R   PD+I+Y  +I G C  N C  DG
Sbjct: 592 GRRKWRPDVISYTNVIWGLCRSN-CREDG 619



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 215/440 (48%), Gaps = 22/440 (5%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK--ILKRLCINGQIG---NASS 234
            +E ++  L   G +++  ++ +Q+  +GF      C++   +  + +  Q+G    A  
Sbjct: 78  TFEVMIRKLAMDGQVDSVQYLLQQMKLQGF-----HCSEDLFISVISVYRQVGLAERAVE 132

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  +   G  P+V  ++ +++    E +++  + +Y  M      P++  Y++L+  L 
Sbjct: 133 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 192

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  ++    +LL+   ++G   D V +++V+ +   +G V    +  +R     F P V 
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVS 247

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y+ LI GLC++     A  L  +++ + + P++++YS+LI+  C SG++   FS    M
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307

Query: 415 IKRGLKPDAVVCSLLING--LMG---DALRFFFQSVR-MTLIPNLFIFNTLMDGCCRLKR 468
           +KRG  P+    S L+ G  L G   DAL  + Q +R   L PN+  +NTL+ G C    
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
               V +F  M      P++ T+  LI G A +GSL  A+ ++ +ML  G  P+V+ Y+ 
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN 427

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           ++  L +         + ++M +   AP +  +N  +  L     LD A K+F Q+  + 
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487

Query: 589 -LEPDIITYNTIICGYCSLN 607
              P+I+TYN ++ G    N
Sbjct: 488 RCPPNIVTYNELLDGLAKAN 507



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 240/522 (45%), Gaps = 29/522 (5%)

Query: 82  VASHVFDKMVIQ--FGKTYNFFR-LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM 138
           + +HV D ++ +      Y  +R + RD        Y+ L++   +  K+D + ++   M
Sbjct: 148 IYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM 207

Query: 139 SDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIEN 196
           S+ G    PD V    ++S + +   V +  +L          VY  L+NGL ++   + 
Sbjct: 208 SNKGC--CPDAVSYTTVISSMCEVGLVKEGRELAERFE-PVVSVYNALINGLCKEHDYKG 264

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF + R+++++G  PN+++ + ++  LC +GQI  A S    +L  G  PN+ T S+L+ 
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324

Query: 257 AFCKEAKLEKAFQLYNLMME-MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
                     A  L+N M+    L P+++ Y+ L+ G    G + +   +     + G  
Sbjct: 325 GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS 384

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            ++  + S+++ +   G +  AV  +++ML  G  PNV+ Y+ +++ LC+  +  EA  L
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL 444

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG-LKPDAVVCSLLINGLM 434
              +      PS+ T+++ I G C +G+L     ++  M ++    P+ V  + L++GL 
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLA 504

Query: 435 ---------GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
                    G     F + V  +       +NTL+ G C        ++L   M +    
Sbjct: 505 KANRIEEAYGLTREIFMRGVEWS----SSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKS 560

Query: 486 PDVITHTVLIRGIASQGSLSSA--ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           PD IT  ++I     QG    A  +L      +R   PDVI+Y+ +I GL +      G+
Sbjct: 561 PDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGV 620

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            + + M   G+ P IA ++VL+N  I    LD  ++   Q T
Sbjct: 621 ILLERMISAGIVPSIATWSVLINCFI----LDDIVRAHDQFT 658



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 155/331 (46%), Gaps = 3/331 (0%)

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
           + + ++I  L   G++     LL     +G      +F SV+  Y  +G   RAV+ + R
Sbjct: 77  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           +   G  P+V  Y+ ++  L  + R+     ++  +     EP++ TY+ L+   CK+ K
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           +     L   M  +G  PDAV  + +I+ +    L    + +     P + ++N L++G 
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+        +L   M    I P+VI+++ LI  + + G +  A     QMLKRG  P++
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            T S+++ G F        L ++  M R  G+ P++  YN L+       N+  A+ +F 
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
            + + G  P+I TY ++I G+    S  +DG
Sbjct: 377 HMEEIGCSPNIRTYGSLINGFAKRGS--LDG 405


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 257/548 (46%), Gaps = 55/548 (10%)

Query: 84  SHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM--SDM 141
           +H+ DK V  F +  + FR  R S+  F    + +I      G     +E + Y+  S+M
Sbjct: 125 AHLPDKAVDLFHRMVDEFRCKR-SVKSFNSVLNVIINE----GLYHRGLEFYDYVVNSNM 179

Query: 142 GIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGK-----GFCVYEFLMNGLLRKGVI 194
            + +SP+ +    ++  L     V +  ++ R M  +     G+  Y  LM+GL ++  I
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY-TYCTLMDGLCKEERI 238

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           + A  +  ++   G  P+ V  N ++  LC  G +   + L D + L G  PN VT++TL
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I+  C + KL+KA  L   M+    +P+ + Y  LI+GL K  R  +   LL +  +RG 
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
            L+  ++S ++      G    A+  + +M   G  PN++ YS+L+ GLC++G+  EA  
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
           +  +++     P+  TYSSL+ GF K+G   +   ++  M K G       CS       
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG-------CSR------ 465

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
                            N F ++ L+DG C + R  + + ++  M    IKPD + ++ +
Sbjct: 466 -----------------NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508

Query: 495 IRGIASQGSLSSAILLFFQML---KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           I+G+   GS+ +A+ L+ +ML   +    PDV+TY+ ++ GL   K+IS  + +   M  
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568

Query: 552 NGVAPDIAIYNVLLNMLIKECN-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
            G  PD+   N  LN L ++ N  D       +L  R L+   ++      G C++   +
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVS------GACTIVEVM 622

Query: 611 IDGYFKSQ 618
           +  Y   +
Sbjct: 623 LGKYLAPK 630



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 150/353 (42%), Gaps = 63/353 (17%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI      GK+D++V +   M       +      L++ LV         +L  +M 
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G+     +Y  L++GL ++G  E A  + R++ ++G  PNIV  + ++  LC  G+  
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + + ++  G  PN  T+S+L+  F K    E+A Q++  M +     +   YS+LI
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML---NG 347
           DGL   GR+KE   +    L  G+K D V +SS++    GIG +  A++ Y  ML     
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEP 534

Query: 348 GFLPNVISYSILIKGL-----------------------------------------CQQ 366
              P+V++Y+IL+ GL                                         C +
Sbjct: 535 KSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDK 594

Query: 367 GR---------------LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           GR               +  AC +   +L + L P   T++ ++   CK  K+
Sbjct: 595 GRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKI 647



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 156/343 (45%), Gaps = 57/343 (16%)

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI----SYSILIKGLCQQGR 368
             KL     SS++++Y   GD      + +++L+   L N +    S+ ++ +   +   
Sbjct: 72  SFKLGDSTLSSMIESYANSGDF----DSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHL 127

Query: 369 LVEACGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL----KPDA 423
             +A  LF +++   R + S+ +++S+++     G    G   YD ++   +     P+ 
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187

Query: 424 VVCSLLINGLMGDALRFFFQSVRM-------TLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           +  +L+I  L    LRF  +++ +         +P+ + + TLMDG C+ +R  + V L 
Sbjct: 188 LSFNLVIKALC--KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245

Query: 477 MLMG---------MYNI--------------------------KPDVITHTVLIRGIASQ 501
             M          +YN+                           P+ +T+  LI G+  +
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G L  A+ L  +M+     P+ +TY  +I+GL K +  +  + +   ME  G   +  IY
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +VL++ L KE   + A+ L+ ++ ++G +P+I+ Y+ ++ G C
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 198/395 (50%), Gaps = 43/395 (10%)

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSC--LVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR 190
           +I+ +   M  YL    V   + C  L   +     +  CR            ++  L++
Sbjct: 65  DIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRK-----------VLEHLMK 113

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
               +  +  ++++++ G+  ++   N ++ R C  G++  A S+FD +   G +P+VV+
Sbjct: 114 LKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVS 173

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           F+TL+N + +   L++ F+L + M    + PD+  YS+LI+GL K  ++ E NEL    L
Sbjct: 174 FNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEML 233

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
           DRGL  + V F++++D +   G V  A++ Y +ML+ GF P++I+Y+ LI GLC++G L 
Sbjct: 234 DRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLK 293

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           +   L  ++ +  L+P  +TY++LIDG CK G L   F     MIK  ++ D V  + L+
Sbjct: 294 QVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALV 353

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           +GL                              C+  RA D  K+F  M    +KPD  T
Sbjct: 354 SGL------------------------------CQEGRADDAEKMFREMLSVGLKPDNGT 383

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           +T++I     +G + +A  L  +M + G  P V+T
Sbjct: 384 YTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 176/372 (47%), Gaps = 7/372 (1%)

Query: 231 NASSLFDVLLLVG--PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +AS++F  +L      + ++  FS L+ A+ +   +  A Q + L  +            
Sbjct: 47  SASAVFAAILGTKGTQRSDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRK 106

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +++ L K    K   +     L+ G    +  F+ VM  +   G++ RA   +D +   G
Sbjct: 107 VLEHLMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWG 166

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V+S++ L+ G  + G L E   L   +    ++P + TYS LI+G CK  K+ +  
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEAN 226

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L++ M+ RGL P+ V  + LI     NG++  A+  + Q +     P+L  +NTL+ G 
Sbjct: 227 ELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGL 286

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+         L   M M  +KPD IT+T LI G   +G L +A     +M+K  +  D 
Sbjct: 287 CKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDN 346

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + Y+A++ GL +         MF+ M   G+ PD   Y +++N   K+ ++  A +L  +
Sbjct: 347 VAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKE 406

Query: 584 LTDRGLEPDIIT 595
           +   G  P ++T
Sbjct: 407 MQRDGHVPCVVT 418



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 40/328 (12%)

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQT-----------------------------------Y 341
           D+ VFS +M AY+  G V  A+Q                                    Y
Sbjct: 65  DIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFY 124

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             +L  G+  ++  ++I++   C++G +  A  +F  +    L PS++++++L++G+ + 
Sbjct: 125 KEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRL 184

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L +GF L   M   G++PD    S+LINGL     + +A   F + +   L+PN   F
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTF 244

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+D  C+       ++++  M      PD+IT+  LI G+  +G L     L  +M  
Sbjct: 245 TTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSM 304

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            GL PD ITY+ +I G  K  ++       K M +  +  D   Y  L++ L +E   D 
Sbjct: 305 NGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADD 364

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+F ++   GL+PD  TY  II  +C
Sbjct: 365 AEKMFREMLSVGLKPDNGTYTMIINEFC 392



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 124/284 (43%), Gaps = 27/284 (9%)

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS------------------ 387
           N  F   + +Y  +I  LC    L+EA  L   V+ R+ + S                  
Sbjct: 6   NXTFRHTLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSD 65

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF------ 441
           +  +S L+  + +SG + D    +    K         C  ++  LM   L++F      
Sbjct: 66  IYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLM--KLKYFKLVWDF 123

Query: 442 FQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           ++ +     P +L+ FN +M   C+         +F  +  + ++P V++   L+ G   
Sbjct: 124 YKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIR 183

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G L     L   M   G+ PDV TYS +I+GL K   +     +F  M   G+ P+   
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVT 243

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +  L+++  K   +D+A++++ Q+  +G  PD+ITYNT+I G C
Sbjct: 244 FTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLC 287



 Score = 42.7 bits (99), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 52/122 (42%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           + D+   + L+      G +  AI  F    K        T   ++  L K K   +   
Sbjct: 63  RSDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWD 122

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +K +   G    +  +N++++   KE  +  A  +F  +T  GL P ++++NT++ GY 
Sbjct: 123 FYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 605 SL 606
            L
Sbjct: 183 RL 184


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 137/603 (22%), Positives = 275/603 (45%), Gaps = 40/603 (6%)

Query: 23  SKTHISDL-QFNQANAIL-ANLIKT-NNPTPAIQFFKW---THNCVSSPNIAQLIHVLLQ 76
            +T +SD   FN A+ +    L+ T NN   +++FF+W    H+C   P         + 
Sbjct: 76  EQTLVSDFPSFNFADPLFFRELVATQNNVLLSLRFFQWLCTNHDCTPDP---------IS 126

Query: 77  SDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVR----IGKIDESV 132
           S+M      +F+ ++    K     ++ RD  G F  D S  +E YV+    +G I+E++
Sbjct: 127 SNM------LFEALLD--AKAVRAAKMVRDIAG-FIPD-SASLEQYVKCLCGVGFIEEAI 176

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC------VYEFLMN 186
           E++  + + GI +S      ++S  + +      ++  + M   G            L+ 
Sbjct: 177 EVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQ 236

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
                G +   + +  Q ++ G  P   T NK++   C      + S +   ++     P
Sbjct: 237 AFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLP 296

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
            + T+  +IN  CK  +  +A++++N + +    PD ++Y+ +I GL + G   E  +L 
Sbjct: 297 TIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLW 356

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              +D+G++ +   +++++   +  GD  RA + Y+ M N G+    ++ + +I  LC +
Sbjct: 357 FEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSR 416

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G+  EA  +F ++    ++   +TY+SLI GFCK GK+ +  +L + ++ +  +P   + 
Sbjct: 417 GKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLY 476

Query: 427 SLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
            LLI     +G    A R         L PN + ++T++ G  +        +L+     
Sbjct: 477 ELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCN 536

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
                   T   +I  + S+G    A  +F +M + G+  D ITY+++I G  K   +  
Sbjct: 537 KGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGK 596

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            +++   +   G+ P  + Y  L+  L +  + ++A +L+G +  +G+EP       +I 
Sbjct: 597 SMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLIS 656

Query: 602 GYC 604
           G C
Sbjct: 657 GLC 659



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 177/368 (48%), Gaps = 13/368 (3%)

Query: 130 ESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEF 183
           E+  +F  + D G   +PD V    ++  L +  S G+  KL   M  KG       Y  
Sbjct: 316 EAYRVFNDLKDRG--YAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNT 373

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++G L+ G  E A  ++ ++  +G+    VTCNKI+  LC  G+   A  +F  +   G
Sbjct: 374 MLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETG 433

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            + + +T+++LI  FCKE K+++   L N ++  D  P + +Y +LI    K G  +   
Sbjct: 434 IQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAK 493

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            LL     +GL  +   + +++   +  GD     + Y+   N G+     + + +I  L
Sbjct: 494 RLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISEL 553

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C +G+  EA  +F ++    ++   +TY+SLI GFCK GK+    +L + ++ +GL+P A
Sbjct: 554 CSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSA 613

Query: 424 VVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              + LI     NG    A R +   V   + P+  +   L+ G C+  RAT+ +   M 
Sbjct: 614 SSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMG 673

Query: 479 MGMYNIKP 486
           M    IKP
Sbjct: 674 MLENKIKP 681



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 7/266 (2%)

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            GF+P+  S    +K LC  G + EA  ++ Q+    +  S++  +S++ G  K+GK   
Sbjct: 150 AGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTEL 209

Query: 407 GFSLYDNMIKRGLKPDA-------VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
            F  Y  MIK G   DA       ++ +   +G +        Q ++  L P    +N L
Sbjct: 210 LFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKL 269

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           + G C+ K      ++   M   N  P + T+  +I G+        A  +F  +  RG 
Sbjct: 270 IAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGY 329

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PD + Y+ +IHGL +  +      ++  M   G+ P+   YN +L+  +K  + + A +
Sbjct: 330 APDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACE 389

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCS 605
           L+ ++ ++G     +T N II   CS
Sbjct: 390 LYNEMCNKGYGTTTVTCNKIISELCS 415



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 4/275 (1%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK----GFCVY 181
           GK DE+ E+F  MS+ GI         L+        V +   L   +  +       +Y
Sbjct: 417 GKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLY 476

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
           E L+    + G  E A  +   +  +G  PN  T + +L     +G   +   L++    
Sbjct: 477 ELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCN 536

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G      T + +I+  C   K ++A +++  M E  +  D I Y+ LI G  K G++ +
Sbjct: 537 KGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGK 596

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              LL   + +GL+     ++S++      GD   A + +  M++ G  P+      LI 
Sbjct: 597 SMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLIS 656

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           GLC+QGR  E       +L  +++P    +  L +
Sbjct: 657 GLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAE 691



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 9/199 (4%)

Query: 418 GLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G  PD+      +      G + +A+  +FQ     +  ++   N+++ GC +  +    
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELL 210

Query: 473 VKLFMLMGMYNIKPDVITHTV--LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
            + +  M       D  T TV  LI+     G ++    L  Q LK GL P   TY+ +I
Sbjct: 211 FEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLI 270

Query: 531 HGLFKGKN-ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            G  + KN  S+   +  ++ RN + P I  Y  ++N L K      A ++F  L DRG 
Sbjct: 271 AGFCQAKNYASMSEVLHTMIARNHL-PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGY 329

Query: 590 EPDIITYNTIICGYCSLNS 608
            PD + Y T+I G C + S
Sbjct: 330 APDRVMYTTMIHGLCEMGS 348


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 219/446 (49%), Gaps = 41/446 (9%)

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           R++   G  P++  CNK+L+ L    +  + S++   +L +G +P++VT++TL+++F KE
Sbjct: 185 REMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKE 244

Query: 262 AKLEKAFQLYNLM-------MEMDLVPDLII----------------------------- 285
            + +K   L   M       +  D+  +++I                             
Sbjct: 245 GRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFT 304

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LI GL   G +K+ ++L L   + G+   VV +++++   +  G +  A   +  M 
Sbjct: 305 YNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMR 364

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G LP+VI+Y+ L+ G C+ G   EA  LFG +    L P++LTY+ LIDG+C+ G L 
Sbjct: 365 AMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 424

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
           +   L + M+++G  PD    ++L+ G      +     FF + +   L P+ F +NT +
Sbjct: 425 EARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRI 484

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
                L   + + +L  ++ +  I  D +T+ +LI G+   G+L  A  L  QM+  GL 
Sbjct: 485 CAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQ 544

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD ITY+ +IH   +   +      F  M  +G+ P    Y V+++   +  NL +A   
Sbjct: 545 PDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGW 604

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSL 606
           F ++ + G+EP+ ITYN +I   C +
Sbjct: 605 FRKMLEEGVEPNEITYNVLIHALCRM 630



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 168/323 (52%), Gaps = 5/323 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++GLL+ G IE A     ++   G +P+++T N +L   C  G    A  LF  L
Sbjct: 339 TYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDL 398

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P V+T++ LI+ +C+   LE+A +L   M+E   +PD+  Y+IL+ G      L
Sbjct: 399 RRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSL 458

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               E     L +GL+ D   +++ + A + +GD+ ++ Q  + ++  G   + ++Y+IL
Sbjct: 459 AMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNIL 518

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+ G L +A  L  Q++   L+P  +TY+ LI   C+ G LR+    +++MI  GL
Sbjct: 519 IDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGL 578

Query: 420 KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P AV  +++I+     G +  A  +F + +   + PN   +N L+   CR+ R     +
Sbjct: 579 PPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYR 638

Query: 475 LFMLMGMYNIKPDVITHTVLIRG 497
            F  M    + P+  T+T+LI G
Sbjct: 639 HFYEMLERGLVPNKYTYTLLIDG 661


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 223/490 (45%), Gaps = 62/490 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I  YV+   +D S+  F  M D G     +    L++ +V S+S  Q++       
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWW------- 149

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
               C +             E+   +   V   G V         +K  C  G+I  +  
Sbjct: 150 ----CFFN------------ESKIKVVLDVYSFGIV---------IKGCCEAGEIEKSFD 184

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   L   G  PNVV ++TLI+  CK+ ++EKA  L+  M +  LV +   Y++LI GLF
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLF 244

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G  K+G E+     + G+  ++  ++ VM+     G    A + +D M   G   N++
Sbjct: 245 KNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIV 304

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI GLC++ +  EA  +  Q+    + P+L+TY++LIDGFC   KL    SL  ++
Sbjct: 305 TYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDL 364

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             RGL P                              +L  +N L+ G C+    +   K
Sbjct: 365 KSRGLSP------------------------------SLVTYNILVSGFCKKGDTSGAGK 394

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M    IKP  +T+T+LI   A   ++  AI L   M + GLTPDV TYS +IHG  
Sbjct: 395 VVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFC 454

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               ++    +FK M      P+  IYN ++    KE +   AL+LF ++ ++ L P++ 
Sbjct: 455 IKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVA 514

Query: 595 TYNTIICGYC 604
           +Y  +I   C
Sbjct: 515 SYRYMIEVLC 524



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 226/464 (48%), Gaps = 46/464 (9%)

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
           ++ S    S+S+  Y       + K   +YE ++N  ++   ++++ +   +++ +GFVP
Sbjct: 69  KIQSQFFTSSSLLHYLTESETSKTKSR-LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVP 127

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC--KEAKLEKAFQ 269
                                S+ F+ LL       VV  S+    +C   E+K++    
Sbjct: 128 --------------------GSNCFNNLLTF-----VVGSSSFNQWWCFFNESKIK---- 158

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
                    +V D+  + I+I G  +AG +++  +LL+   + G   +VV++++++D   
Sbjct: 159 ---------VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G++ +A   +  M   G + N  +Y++LI GL + G   +   ++ ++    + P+L 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLH 269

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           TY+ +++  CK G+ +D F ++D M +RG+  + V  + LI GL       +A     Q 
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
               + PNL  +NTL+DG C +++    + L   +    + P ++T+ +L+ G   +G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           S A  +  +M +RG+ P  +TY+ +I    +  N+   + +   ME  G+ PD+  Y+VL
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVL 449

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           ++    +  ++ A +LF  + ++  EP+ + YNT++ GYC   S
Sbjct: 450 IHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGS 493


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 227/454 (50%), Gaps = 57/454 (12%)

Query: 202  RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
            R++   G  P++  CN++L+ L    +  +  ++ + +L +G +P++VT++TL+++F KE
Sbjct: 1073 REMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKE 1132

Query: 262  AKLEKAFQLYNLMMEMDL-----VPDLIIYSILIDGLFKAGRLKEGNEL----------- 305
             + +K      L+ EM+      +P+ + Y+++I GL + G L+E  EL           
Sbjct: 1133 GRKDKVAM---LLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKAS 1189

Query: 306  ------LLTAL-----------------DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
                  L+T L                 + G+   VV +++++   +  G V  A   + 
Sbjct: 1190 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 1249

Query: 343  RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
             M   G LP+VI+Y+ L+ G C+ G L EA  LFG +    L P++LTY+ LIDG+C+ G
Sbjct: 1250 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 1309

Query: 403  KLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFN 457
             L +   L + M ++G  P+    ++L+ G      +  A  FF + +   L P+ F +N
Sbjct: 1310 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYN 1369

Query: 458  TLMDGCCRL-----KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
            T +  C  L      RA +  ++ ML G   I  D +T+ +LI G+   G+L  A  L  
Sbjct: 1370 TRI--CAELILGDIARAFELREVLMLEG---ISSDTVTYNILIHGLCKTGNLKDAKELQM 1424

Query: 513  QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            +M+  GL PD ITY+ +IH   +   +     +F  M  +G+ P    + V+++   +  
Sbjct: 1425 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRG 1484

Query: 573  NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            NL +A   F ++ + G+EP+ ITYN +I   C +
Sbjct: 1485 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM 1518



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 214/428 (50%), Gaps = 10/428 (2%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ +I    R G ++E+ E+   M  +    S      L++ L+    V + Y L   M 
Sbjct: 1159 YNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLEME 1217

Query: 175  GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             +G       Y  +++GLL+ G++E A     ++   G +P+++T N +L   C  G + 
Sbjct: 1218 NEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLK 1277

Query: 231  NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
             A  LF  L   G  P V+T++ LI+ +C+   LE+A  L   M E   +P++  Y+IL+
Sbjct: 1278 EALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILM 1337

Query: 291  DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
             G      L    E     L +GL+ D   +++ + A + +GD+ RA +  + ++  G  
Sbjct: 1338 KGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGIS 1397

Query: 351  PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
             + ++Y+ILI GLC+ G L +A  L  +++   L+P  +TY+ LI   C+ G LR+   +
Sbjct: 1398 SDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKI 1457

Query: 411  YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            ++NMI  GL P AV  +++I+     G +  A  +F + +   + PN   +N L+   CR
Sbjct: 1458 FNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 1517

Query: 466  LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            + R       F  M    +  +  T+T+LI G    G+   A+  +F+M + G+ PD +T
Sbjct: 1518 MGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLT 1577

Query: 526  YSAIIHGL 533
            + A++ G 
Sbjct: 1578 HKALLKGF 1585



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 236/500 (47%), Gaps = 47/500 (9%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
            Y+ L++++++ G+ D+   +   M   G    P+ V    +++ L     + +  +L   
Sbjct: 1122 YNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG 1181

Query: 173  MR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            MR       F  Y  L+ GLL +G ++  + +  ++   G +P +VT N ++  L  +G 
Sbjct: 1182 MRLSKKASSF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGL 1240

Query: 229  IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
            +  A   F  +  +G  P+V+T+++L+N +CK   L++A  L+  +    L P ++ Y+I
Sbjct: 1241 VEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNI 1300

Query: 289  LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            LIDG  + G L+E   L     ++G   +V  ++ +M   + +  +  A + +D ML+ G
Sbjct: 1301 LIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKG 1360

Query: 349  FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              P+  +Y+  I      G +  A  L   +++  +    +TY+ LI G CK+G L+D  
Sbjct: 1361 LQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAK 1420

Query: 409  SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
             L   M+  GL+PD +  + LI+     GL+ +A + F               N + DG 
Sbjct: 1421 ELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFN--------------NMISDG- 1465

Query: 464  CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
                                + P  +T TV+I     +G+L SA   F +ML+ G+ P+ 
Sbjct: 1466 --------------------LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 1505

Query: 524  ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            ITY+ +IH L +     +  H F  M   G+  +   Y +L++   K  N + A++ + +
Sbjct: 1506 ITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFE 1565

Query: 584  LTDRGLEPDIITYNTIICGY 603
            +   G+ PD +T+  ++ G+
Sbjct: 1566 MHQNGIHPDYLTHKALLKGF 1585



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 165/388 (42%), Gaps = 53/388 (13%)

Query: 70   LIHVLLQSDMRDVASHVFDKM--------VIQFGKTYN--------------FFRLFRDS 107
            +IH LLQS + + A   F +M        VI +    N              F  L R  
Sbjct: 1231 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290

Query: 108  LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
            L      Y+ LI+ Y R+G ++E+  +   M + G             CL +        
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG-------------CLPN-------- 1329

Query: 168  KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                       C Y  LM G L    +  A     +++ +G  P+    N  +    I G
Sbjct: 1330 ----------VCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILG 1379

Query: 228  QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
             I  A  L +VL+L G   + VT++ LI+  CK   L+ A +L   M+   L PD I Y+
Sbjct: 1380 DIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYT 1439

Query: 288  ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
             LI    + G L+E  ++    +  GL    V F+ ++ AY   G++  A   + +ML  
Sbjct: 1440 CLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE 1499

Query: 348  GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
            G  PN I+Y++LI  LC+ GR   A   F ++L R L  +  TY+ LIDG CK G   D 
Sbjct: 1500 GVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDA 1559

Query: 408  FSLYDNMIKRGLKPDAVVCSLLINGLMG 435
               Y  M + G+ PD +    L+ G  G
Sbjct: 1560 MRFYFEMHQNGIHPDYLTHKALLKGFDG 1587



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 171/376 (45%), Gaps = 39/376 (10%)

Query: 234  SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            S F  +   G  P+V   + ++      A+ +    ++  M+E+ + P ++ Y+ L+D  
Sbjct: 1070 SAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSF 1129

Query: 294  FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
             K GR  +   LL     RG                                  G LPN 
Sbjct: 1130 LKEGRKDKVAMLLKEMETRG---------------------------------SGCLPND 1156

Query: 354  ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            ++Y+++I GL ++G L EA  L   + + + + S  TY+ LI G    G ++  + L   
Sbjct: 1157 VTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLE 1215

Query: 414  MIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVR-MTLIPNLFIFNTLMDGCCRLKR 468
            M   G+ P  V  + +I+GL+     +A +  F  +R M L+P++  +N+L++G C+   
Sbjct: 1216 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 1275

Query: 469  ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
              + + LF  +    + P V+T+ +LI G    G L  A +L  +M ++G  P+V TY+ 
Sbjct: 1276 LKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 1335

Query: 529  IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
            ++ G    +++++    F  M   G+ PD   YN  +   +   ++  A +L   L   G
Sbjct: 1336 LMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEG 1395

Query: 589  LEPDIITYNTIICGYC 604
            +  D +TYN +I G C
Sbjct: 1396 ISSDTVTYNILIHGLC 1411


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 201/389 (51%), Gaps = 7/389 (1%)

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++  LC  G++  A  L   +   G KPNVVT++TL+NA+ K    E   ++  L MEMD
Sbjct: 221 VIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRL-MEMD 279

Query: 279 -LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            +V +   Y++LI+    +G++ E  ++    L+RG++ D+ VF+S++     +G++ RA
Sbjct: 280 KVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRA 339

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
              +D +   G + N  +Y  LI G C  G+L  A  L  ++  + L+ +L+ +++LI+G
Sbjct: 340 FALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLING 399

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
           +CK G + +   + D M K+G + D    + +  GL       +A R+ F  V   + PN
Sbjct: 400 YCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPN 459

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              F  ++D  C+     +  ++F  M     KP+V+T+  LI G + +G L  A  L  
Sbjct: 460 AVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKD 519

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M   G+T D+ TY+ ++HG      +   L +   + R G+A  I  Y  +++ L KE 
Sbjct: 520 EMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEG 579

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIIC 601
             + A +L+ ++   GL PD   Y +++ 
Sbjct: 580 RSEEAFRLYDEMMAAGLTPDDRVYTSLVA 608



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 208/420 (49%), Gaps = 17/420 (4%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
            +I+N FH      +  FV  +  C+ + +    N        +FD ++  G K +  + 
Sbjct: 132 SLIDNRFH------EPKFVEKL--CDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSC 183

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS--ILIDGLFKAGRLKEGNELLLTA 309
              + A  +  ++  +   +  M+E  +  D+ +YS  I+IDGL K GR++   +L+L  
Sbjct: 184 IVCLLALKRSDQMVMSLGFFKKMVEFKV--DVTVYSMTIVIDGLCKKGRVERAKDLMLEM 241

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
             +G+K +VV ++++++AY+ I D     +    M     + N  +Y++LI+     G++
Sbjct: 242 TGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKI 301

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            EA  +F ++L R +E  +  ++S+I   CK G ++  F+L+D + +RGL  +A     L
Sbjct: 302 AEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGAL 361

Query: 430 INGLMG----DALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I+G       DA       ++   L  NL IFNTL++G C+     + +++  +M     
Sbjct: 362 IHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGF 421

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           + D+ T+  +  G+        A    F M+++G+ P+ ++++ +I    K  N+     
Sbjct: 422 ENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAER 481

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +F+ M++ G  P++  YN L++   K+  L  A +L  ++   G+  DI TY T++ G C
Sbjct: 482 VFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGEC 541



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 161/323 (49%), Gaps = 4/323 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LIE Y   GKI E+ ++F  M + G+     +   ++S      ++ + + L   + 
Sbjct: 288 YTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELN 347

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L++G    G ++ A  +  ++  +G   N+V  N ++   C  G I 
Sbjct: 348 ERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMID 407

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + DV+   G + ++ T++T+    CK  + E+A +    M+E  + P+ + ++I+I
Sbjct: 408 EALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMI 467

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           D   K G L E   +      +G K +VV +++++D Y   G +  A +  D M + G  
Sbjct: 468 DIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMT 527

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            ++ +Y+ L+ G C  G++ EA  L  +V  + L  S++TY+++I G  K G+  + F L
Sbjct: 528 SDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRL 587

Query: 411 YDNMIKRGLKPDAVVCSLLINGL 433
           YD M+  GL PD  V + L+  L
Sbjct: 588 YDEMMAAGLTPDDRVYTSLVANL 610



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 163/351 (46%), Gaps = 24/351 (6%)

Query: 281 PDLIIYSILIDGLFKAGR-LKEGNELLLTALDRGLKLDVVVFSSVMD------------- 326
           PDL  + ILI  LFKA + +   N L   A+D+ L+  V  F S++D             
Sbjct: 89  PDLRAHVILISRLFKARKFVVMKNVLTCYAMDKNLRCSVSDFVSLIDNRFHEPKFVEKLC 148

Query: 327 -----AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
                 YV         + +D M++ G   +  S  + +  L +  ++V + G F +++ 
Sbjct: 149 DMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVE 208

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DA 437
            +++ ++ + + +IDG CK G++     L   M  +G+KP+ V  + L+N  +     + 
Sbjct: 209 FKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEG 268

Query: 438 LRFFFQSVRM-TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           +    + + M  ++ N   +  L++      +  +  K+F  M    ++ D+   T +I 
Sbjct: 269 VNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIIS 328

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
                G++  A  LF ++ +RGL  +  TY A+IHG      +     +   M+  G+  
Sbjct: 329 WQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDM 388

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           ++ I+N L+N   K+  +D AL++   +  +G E DI TYNTI  G C LN
Sbjct: 389 NLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLN 439


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 204/408 (50%), Gaps = 11/408 (2%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++  RG  P+ V  N IL  LC       A +LFD +  +G   N  T+  LI+  CK  
Sbjct: 36  EIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKAR 94

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L++A  L   M    + P  ++++++I GL +AGRL+    +    ++     D + ++
Sbjct: 95  LLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVY-RQMNDAHPPDFLTYT 153

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
            ++      G +  AVQ    M++   +P+  + +++++ LC   R+ +A  L  ++L R
Sbjct: 154 KLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHR 213

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLY-DNMIKRGLKPDAVVCSLLINGL-----MGD 436
            +  + +TYS+L+DG CK  +L +  +L    + +RG  PD V  S +I+GL     + D
Sbjct: 214 GMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 273

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A+  F +   M+  P    +N+L+ G CR     + ++L   M   N  PDVIT+T L+ 
Sbjct: 274 AVDIFEE---MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMS 330

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
                G L  A  LF QM+   L+PDV+T+++++ GL     +   L + + + R G  P
Sbjct: 331 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 390

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            I  YN +++   K   +  A +L      RG  P+ +TYN ++ G C
Sbjct: 391 TIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 438



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/558 (23%), Positives = 250/558 (44%), Gaps = 77/558 (13%)

Query: 64  SPNIAQLIHVLLQ-SDMRDV--ASHVFDKMV----IQFGKTYNFF------RLFRDSLG- 109
           SP+  +L  +L +  D RD   A  +FDKM     +     YN        RL  +++G 
Sbjct: 43  SPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGL 102

Query: 110 -----DFGCDYSFLIENYV-----RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
                  G +   L+ N V     R G++  ++ ++  M+D      PD           
Sbjct: 103 LLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH---PPD----------- 148

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
                             F  Y  L++GL + G + +A  + ++++    VP+  T   +
Sbjct: 149 ------------------FLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVV 190

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ-LYNLMMEMD 278
           ++ LC+  ++ +A  L + +L  G   N +T+S L++  CK  +L++A   L   +    
Sbjct: 191 VQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRG 250

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             PD++ YS +IDGL KAGRL++  ++     +       + ++S++  Y   GD+  A+
Sbjct: 251 FTPDIVTYSTVIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAI 307

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           +   +M++    P+VI+Y+ L+   C+ GRL +A  LF Q++  +L P ++T++SL+DG 
Sbjct: 308 RLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 367

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-------MGDALRFFFQSVRMTLIP 451
           C  G++ D   L + + +RG  P     + +++G          + L   F+S     +P
Sbjct: 368 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRS--RGFVP 425

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN--IKPDVITHTVLIRGIASQGSLSSAIL 509
           N   +N L+ GCCR  R    ++    +          V  + +++  +   G    A+ 
Sbjct: 426 NTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQ 485

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN--- 566
            + +M++RG  P   T++ ++  L K         + + M + G  P     + +++   
Sbjct: 486 FYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYC 545

Query: 567 ---MLIKECNLDAALKLF 581
              M+ K   L + L+L+
Sbjct: 546 RAGMIQKADELASELRLY 563



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 178/410 (43%), Gaps = 80/410 (19%)

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIG 332
           M++     D   +++++ GL  + +L+    LLL  + DRGL  D V  ++++       
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 333 DVGRAVQTYDRMLNGGFL----------------------------------PNVISYSI 358
           D   A+  +D+M   G +                                  P  + +++
Sbjct: 61  DTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNV 120

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF---------- 408
           +I GLC+ GRL  A G++ Q +     P  LTY+ L+ G  K+G+LRD            
Sbjct: 121 VIGGLCRAGRLRHALGVYRQ-MNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSAR 179

Query: 409 -------------------------SLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
                                     L + M+ RG+  +A+  S L++GL     + +A+
Sbjct: 180 HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAV 239

Query: 439 RFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
                 V R    P++  ++T++DG C+  R  D V +F  M   +  P  IT+  LI G
Sbjct: 240 ALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGG 296

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
               G +  AI L  +M+     PDVITY+ ++    K   +     +F+ M  N ++PD
Sbjct: 297 YCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPD 356

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +  +  L++ L  E  ++ AL+L  ++T RG  P I TYN ++ GYC  N
Sbjct: 357 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSN 406


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 236/496 (47%), Gaps = 17/496 (3%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV------DSNSVGQYYKLCRAMRGK 176
           V+ GK+D + E++  M + G     DLV    S ++      D   V +  KL     G 
Sbjct: 175 VKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGN 234

Query: 177 GFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           G CV     Y  +++G  +KG ++ A  +  ++  +GF+P + T   ++   C  G+   
Sbjct: 235 G-CVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQV 293

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
              L + + ++G   NV  F+++I+A  K   ++KA ++  +M EM   PD+  Y+ILI+
Sbjct: 294 VDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILIN 353

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
                GR+KE  E L  A +R L  +   ++ +M AY   GD   A     ++   G  P
Sbjct: 354 FSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKP 413

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +++SY   I G    G +  A  +  +++ + + P    Y+ L+ G CK G+      L 
Sbjct: 414 DLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLL 473

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M+   L+PDA + + L++G      +  A   F   +   + P +  +N ++ G C+ 
Sbjct: 474 SEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKC 533

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            + TD V     M + N  PD  TH+ +I G   Q  L SA+ +F QM+K+   P+V+ Y
Sbjct: 534 GKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAY 593

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           +++I+G  K  ++S    +F+ M+   + P++  Y +L+    K    + A   F  +  
Sbjct: 594 TSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLM 653

Query: 587 RGLEPDIITYNTIICG 602
               P+  T++ +I G
Sbjct: 654 NNCLPNDTTFHYLING 669



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 149/601 (24%), Positives = 262/601 (43%), Gaps = 102/601 (16%)

Query: 61  CVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE 120
           CV + N   L++ L+++   DVA  ++DKM+              +  GD G D   +++
Sbjct: 163 CVVANN--SLLNCLVKNGKVDVACELYDKML--------------ERGGDHGLD--LVVD 204

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV 180
           NY        S+ I                  ++  L D   V +  KL     G G CV
Sbjct: 205 NY--------SIVI------------------VVKGLCDVGKVEEGRKLIDDRWGNG-CV 237

Query: 181 -----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                Y  +++G  +KG ++ A  +  ++  +GF+P + T   ++   C  G+      L
Sbjct: 238 PNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQL 297

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
            + + ++G   NV  F+++I+A  K   ++KA ++  +M EM   PD+  Y+ILI+    
Sbjct: 298 LNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCS 357

Query: 296 AGRLKEGNELLLTALDR-----------------------------------GLKLDVVV 320
            GR+KE  E L  A +R                                   G K D+V 
Sbjct: 358 GGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVS 417

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           + + +   V  G++  A+   ++M+  G  P+   Y++L+ GLC++GR   A  L  ++L
Sbjct: 418 YGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEML 477

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
              L+P    Y++L+DGF ++ +L     L++ ++ +G+ P  V  +++I GL     M 
Sbjct: 478 DLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMT 537

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           DA+ +  +       P+ +  +T++DG  +       +K+F  M     KP+V+ +T LI
Sbjct: 538 DAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLI 597

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            G      +S A  +F  M    L P+V+TY+ +I G  K          F+LM  N   
Sbjct: 598 NGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCL 657

Query: 556 PDIAIYNVLLNMLI------------KECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           P+   ++ L+N L             +E +    L  F  +   G    I TYN+II   
Sbjct: 658 PNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCL 717

Query: 604 C 604
           C
Sbjct: 718 C 718



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 227/507 (44%), Gaps = 46/507 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+ + + GK     ++   M+ MG+ ++  +   ++        V +  ++ R M 
Sbjct: 278 YGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMT 337

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+N     G I+ A     +  +R  +PN  +   ++   C  G   
Sbjct: 338 EMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYV 397

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS +   +   G KP++V++   I+      +++ A  +   MME  + PD  IY++L+
Sbjct: 398 MASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLM 457

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K GR      LL   LD  L+ D  ++++++D ++   ++ +A + ++ +++ G  
Sbjct: 458 SGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGID 517

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P V+ Y+++IKGLC+ G++ +A     ++ I    P   T+S++IDG+ K   L     +
Sbjct: 518 PGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKM 577

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           +  M+K+  KP+ V  + LING                               C++   +
Sbjct: 578 FGQMMKQKYKPNVVAYTSLINGF------------------------------CKIADMS 607

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              K+F  M  +N++P+V+T+T+LI G +  G    A   F  ML     P+  T+  +I
Sbjct: 608 RAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLI 667

Query: 531 HGLFKGKNI------------SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           +GL    N             S+ L  F  M   G +  IA YN ++  L K   +D A 
Sbjct: 668 NGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQ 727

Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCS 605
            L  ++  +G   D + ++ ++ G C 
Sbjct: 728 LLQTKMLRKGFLMDSVCFSALLHGLCQ 754



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 206/411 (50%), Gaps = 14/411 (3%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFD-VLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           R F P +   N ++      G +  A  +F  V  L    P VV  ++L+N   K  K++
Sbjct: 122 RNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVD 181

Query: 266 KAFQLYNLMME------MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
            A +LY+ M+E      +DLV D     I++ GL   G+++EG +L+      G   +VV
Sbjct: 182 VACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVV 241

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            ++ ++D Y   GD+ RA + ++ +   GFLP + +Y  LI G C+ G+      L  ++
Sbjct: 242 FYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEM 301

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLM 434
            +  L  ++  ++S+ID   K G +     +   M + G +PD    ++LIN     G +
Sbjct: 302 NVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRI 361

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A  F  ++   TL+PN F +  LM   C+         +   +     KPD++++   
Sbjct: 362 KEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAF 421

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF-KGKNISVGLHMFKLMERNG 553
           I G  + G +  A+++  +M+++G+ PD   Y+ ++ GL  KG+  +  L + ++++ N 
Sbjct: 422 IHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLN- 480

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + PD  +Y  L++  I+   LD A +LF  +  +G++P ++ YN +I G C
Sbjct: 481 LQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLC 531



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 150/326 (46%), Gaps = 32/326 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV------QRLMSCLVDSNSVGQYYK 168
           Y+ L++ ++R  ++D++ E+F  +   GI   P +V      + L  C   +++V    K
Sbjct: 488 YATLVDGFIRNNELDKATELFEVVMSKGI--DPGVVGYNVMIKGLCKCGKMTDAVSYVNK 545

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  A        +  +++G +++  +++A  M  Q++++ + PN+V    ++   C    
Sbjct: 546 MKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIAD 605

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +F  +     +PNVVT++ LI  F K  K EKA   + LM+  + +P+   +  
Sbjct: 606 MSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHY 665

Query: 289 LIDGLFKAGR---LKEGNELLLTALDRGLKLDVVV------FSSVMDAY---------VG 330
           LI+GL        L E NE      DR L LD         +S V+  Y          G
Sbjct: 666 LINGLTNITNTTLLIEKNE----ENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHG 721

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
           + D  + +QT  +ML  GFL + + +S L+ GLCQ G+  E   +    L +    +   
Sbjct: 722 MVDTAQLLQT--KMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFE 779

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIK 416
           YS  +D +   GK  +   +  N+I+
Sbjct: 780 YSLKLDKYLYDGKPSEASYILLNLIE 805



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 18/278 (6%)

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL-IRRLEPSLLTYSSLIDGFCK 400
           + M N  F P + + + +I    + G + +A  +F  V  +    P ++  +SL++   K
Sbjct: 117 EDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVK 176

Query: 401 SGKLRDGFSLYDNMIKRG------LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           +GK+     LYD M++RG      L  D     +++ GL     + +  +          
Sbjct: 177 NGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGC 236

Query: 450 IPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
           +PN+  +N ++DG C+   LKRAT   ++F  + +    P + T+  LI G    G    
Sbjct: 237 VPNVVFYNVIIDGYCKKGDLKRAT---RVFEELKLKGFLPTLETYGALIDGFCKAGKFQV 293

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
              L  +M   GL  +V  +++II   +K   +     M ++M   G  PDI  YN+L+N
Sbjct: 294 VDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILIN 353

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
                  +  A +   +  +R L P+  +Y  ++  YC
Sbjct: 354 FSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYC 391


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 240/534 (44%), Gaps = 56/534 (10%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
           R+  +D+S+ I   M D  + +S    Q   S L       + + + + ++ K    Y  
Sbjct: 149 RLRMVDDSLYILKKMKDQNLNVS---TQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYST 205

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++GL R+  +E+A    R    +   P++V+ N I+   C  G +  A S F  +L  G
Sbjct: 206 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 265

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+V + + LIN  C    + +A +L + M +  + PD + Y+IL  G    G +    
Sbjct: 266 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 325

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF-LPNVISYSILIKG 362
           E++   LD+GL  DV+ ++ ++     +G++   +     ML+ GF L ++I  S+++ G
Sbjct: 326 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 385

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP- 421
           LC+ GR+ EA  LF Q+    L P L+ YS +I G CK GK      LYD M  + + P 
Sbjct: 386 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 445

Query: 422 ----------------------------------DAVVCSLLINGL-----MGDALRFFF 442
                                             D V+ +++I+G      + +AL  F 
Sbjct: 446 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 505

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             +   + P++  FN+L+ G C+ +   +  K+  ++ +Y + P V+++T L+   A+ G
Sbjct: 506 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 565

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL------------ME 550
           +  S   L  +M   G+ P  +TYS I  GL +G       H+ +             ME
Sbjct: 566 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 625

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             G+ PD   YN ++  L +  +L  A      +  R L+    TYN +I   C
Sbjct: 626 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 679



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 228/511 (44%), Gaps = 61/511 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           ++ LI     +G I E++E+ + M+  G+   PD V    L         +   +++ R 
Sbjct: 273 HNILINGLCLVGSIAEALELASDMNKHGV--EPDSVTYNILAKGFHLLGMISGAWEVIRD 330

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN-IVTCNKILKRLCING 227
           M  KG       Y  L+ G  + G I+    + + ++ RGF  N I+ C+ +L  LC  G
Sbjct: 331 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 390

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +I  A SLF+ +   G  P++V +S +I+  CK  K + A  LY+ M +  ++P+   + 
Sbjct: 391 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 450

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+ GL + G L E   LL + +  G  LD+V+++ V+D Y   G +  A++ +  ++  
Sbjct: 451 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 510

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V +++ LI G C+   + EA  +   + +  L PS+++Y++L+D +   G  +  
Sbjct: 511 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 570

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL--------MGDALR-FFFQSVRMTL--------I 450
             L   M   G+ P  V  S++  GL            LR   F+  +  L         
Sbjct: 571 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 630

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLM---------GMYNIKPDVI------------ 489
           P+   +NT++   CR+K  +       +M           YNI  D +            
Sbjct: 631 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 690

Query: 490 --------------THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
                          +T LI+    +G    A+ LF Q+L RG    +  YSA+I+ L +
Sbjct: 691 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 750

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
              ++     F LM   G++PD+ I  V++ 
Sbjct: 751 RHLVNESKFFFCLMLSQGISPDLDICEVMIK 781



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/550 (23%), Positives = 249/550 (45%), Gaps = 45/550 (8%)

Query: 67  IAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIG 126
           +++L HV ++  M ++ S   D  V        FF+  RD        +S L+ ++V  G
Sbjct: 44  VSELRHVHVEEIMDELMSESSDLSVW-------FFKELRDIYAFRHSSFSTLLVSHVLAG 96

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC-------RAMRGKGFC 179
           +       F  +            Q ++  L+     G   +LC       R     G  
Sbjct: 97  Q-----RRFKEL------------QVILEQLLQEEGSGSASRLCELLSNSFRKWESTGL- 138

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ L+    R  +++++ ++ +++  +    +  + N +L              ++DV 
Sbjct: 139 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLY------HFRETDKMWDVY 192

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             +  K N  T+ST+++  C++ KLE A          D+ P ++ ++ ++ G  K G +
Sbjct: 193 KEIKDK-NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 251

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                   T L  GL   V   + +++    +G +  A++    M   G  P+ ++Y+IL
Sbjct: 252 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 311

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
            KG    G +  A  +   +L + L P ++TY+ L+ G C+ G +  G  L  +M+ RG 
Sbjct: 312 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 371

Query: 420 KPDAVV-CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           + ++++ CS++++GL     + +AL  F Q     L P+L  ++ ++ G C+L +    +
Sbjct: 372 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 431

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            L+  M    I P+  TH  L+ G+  +G L  A  L   ++  G T D++ Y+ +I G 
Sbjct: 432 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 491

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K   I   L +FK++   G+ P +A +N L+    K  N+  A K+   +   GL P +
Sbjct: 492 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 551

Query: 594 ITYNTIICGY 603
           ++Y T++  Y
Sbjct: 552 VSYTTLMDAY 561



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 39/260 (15%)

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N  +YS ++ GLC+Q +L +A         + + PS+++++S++ G+CK G        +
Sbjct: 199 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG--------F 250

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            +M K                       FF   ++  L+P+++  N L++G C +    +
Sbjct: 251 VDMAKS----------------------FFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 288

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++L   M  + ++PD +T+ +L +G    G +S A  +   ML +GL+PDVITY+ ++ 
Sbjct: 289 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 348

Query: 532 GLFKGKNISVGLHMFKLM-----ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           G  +  NI +GL + K M     E N + P     +V+L+ L K   +D AL LF Q+  
Sbjct: 349 GQCQLGNIDMGLVLLKDMLSRGFELNSIIP----CSVMLSGLCKTGRIDEALSLFNQMKA 404

Query: 587 RGLEPDIITYNTIICGYCSL 606
            GL PD++ Y+ +I G C L
Sbjct: 405 DGLSPDLVAYSIVIHGLCKL 424



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/463 (22%), Positives = 187/463 (40%), Gaps = 101/463 (21%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S ++    + G+IDE++ +F  M   G  LSPDLV                         
Sbjct: 380 SVMLSGLCKTGRIDEALSLFNQMKADG--LSPDLV------------------------- 412

Query: 176 KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                Y  +++GL + G  + A  ++ ++  +  +PN  T   +L  LC  G +  A SL
Sbjct: 413 ----AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 468

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
            D L+  G   ++V ++ +I+ + K   +E+A +L+ +++E  + P +  ++ LI G  K
Sbjct: 469 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 528

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
              + E  ++L      GL   VV ++++MDAY   G+     +    M   G  P  ++
Sbjct: 529 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 588

Query: 356 YSILIKGLCQ-----------QGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDGFC 399
           YS++ KGLC+           + R+ E C    +  +R +E     P  +TY+++I   C
Sbjct: 589 YSVIFKGLCRGWKHENCNHVLRERIFEKC----KQGLRDMESEGIPPDQITYNTIIQYLC 644

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-------------------------- 433
           +   L   F   + M  R L   +   ++LI+ L                          
Sbjct: 645 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 704

Query: 434 -----------MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
                       GD   A++ F Q +      ++  ++ +++  CR     ++   F LM
Sbjct: 705 AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLM 764

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
               I PD+    V+I+             L    +K GL PD
Sbjct: 765 LSQGISPDLDICEVMIKSDE----------LLSWTIKWGLLPD 797


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 209/421 (49%), Gaps = 38/421 (9%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G  ++ +I+   R+G +D++VE+F  MSD              +C+ D            
Sbjct: 175 GLSFNLVIKALCRVGNVDQAVEVFRGMSDR-------------NCVAD------------ 209

Query: 172 AMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
                G+  Y  LM+GL  +G I+ A  +  ++   G  PN V  N ++  LC  G +  
Sbjct: 210 -----GY-TYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSR 263

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           AS L D + L G  PN VT+++L++  C + KL+KA  L N M+    VP+ I +  L+D
Sbjct: 264 ASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVD 323

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G  K GR  +G  +L++  ++G + +   +SS++      G     +Q +  M+  G  P
Sbjct: 324 GFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKP 383

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N I YS LI GLC++G+  EA     ++  +   P+  TYSSL+ G+ ++G +     ++
Sbjct: 384 NTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVW 443

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             M         V  S+LINGL     + +AL  + Q +   +  ++  +++++ G C  
Sbjct: 444 KEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNA 503

Query: 467 KRATDTVKLFMLMGMYNIK--PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +     +KLF  M  +N K  PDV+T+ +L+    ++ S+S AI +   ML +G  PD I
Sbjct: 504 QLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFI 563

Query: 525 T 525
           T
Sbjct: 564 T 564



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 210/426 (49%), Gaps = 11/426 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRG----FVPNIVTCNKILKRLCINGQIGNASSLF 236
           +  ++N ++++G  + A   +  VI         PN ++ N ++K LC  G +  A  +F
Sbjct: 139 FNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVF 198

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
             +       +  T+STL++  C E ++++A  L + M      P+ + +++LI  L K 
Sbjct: 199 RGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKK 258

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G L   ++L+     +G   + V ++S++      G + +A+   +RM+    +PN I++
Sbjct: 259 GDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITF 318

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
             L+ G  + GR ++   +   +  +    +  +YSSLI G  K GK   G  L+  M++
Sbjct: 319 GTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVE 378

Query: 417 RGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           +G KP+ +V S LI+GL       +A  +  +       PN F +++LM G         
Sbjct: 379 KGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHK 438

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            + ++  M   +     + +++LI G+   G L  A++++ QML RG+  DV+ YS++IH
Sbjct: 439 AILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIH 498

Query: 532 GLFKGKNISVGLHMFKLM--ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           G    + +  G+ +F  M      + PD+  YN+LLN    + ++  A+ +   + D+G 
Sbjct: 499 GFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGC 558

Query: 590 EPDIIT 595
           +PD IT
Sbjct: 559 DPDFIT 564



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 184/370 (49%), Gaps = 9/370 (2%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMME----MDLVPDLIIYSILIDGLFKAGRLK 300
           K  V +F+T++N   +E   + A + YN +++     ++ P+ + ++++I  L + G + 
Sbjct: 133 KQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVD 192

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +  E+     DR    D   +S++M      G +  AV   D M   G  PN +++++LI
Sbjct: 193 QAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLI 252

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC++G L  A  L   + ++   P+ +TY+SL+ G C  GKL    SL + M+     
Sbjct: 253 SALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCV 312

Query: 421 PDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ +    L++G +      D +R            N F +++L+ G  +  +    ++L
Sbjct: 313 PNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQL 372

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           +  M     KP+ I ++ LI G+  +G    A     +M  +G TP+  TYS+++ G F+
Sbjct: 373 WKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFE 432

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
             +I   + ++K M  N        Y++L+N L K   L  AL ++ Q+  RG++ D++ 
Sbjct: 433 AGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVA 492

Query: 596 YNTIICGYCS 605
           Y+++I G+C+
Sbjct: 493 YSSMIHGFCN 502



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 200/428 (46%), Gaps = 15/428 (3%)

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           DL     + ++DSNS          ++  G   +  ++  L R G ++ A  + R +  R
Sbjct: 153 DLALEFYNHVIDSNSFSN-------IQPNGLS-FNLVIKALCRVGNVDQAVEVFRGMSDR 204

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
             V +  T + ++  LC  G+I  A SL D + + G  PN V F+ LI+A CK+  L +A
Sbjct: 205 NCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRA 264

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +L + M     VP+ + Y+ L+ GL   G+L +   LL   +      + + F +++D 
Sbjct: 265 SKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDG 324

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +V  G     V+    +   G+  N  SYS LI GL ++G+      L+ +++ +  +P+
Sbjct: 325 FVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPN 384

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GDALRFFFQSV 445
            + YS+LIDG C+ GK  +       M  +G  P++   S L+ G    GD  +      
Sbjct: 385 TIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWK 444

Query: 446 RMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
            MT      +   ++ L++G C+  +  + + ++  M    IK DV+ ++ +I G  +  
Sbjct: 445 EMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQ 504

Query: 503 SLSSAILLFFQML--KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            +   + LF QML     L PDV+TY+ +++      ++S  + +   M   G  PD   
Sbjct: 505 LVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 564

Query: 561 YNVLLNML 568
            ++ L  L
Sbjct: 565 CDIFLKTL 572



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 59/297 (19%)

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           +  RG  F  Y  L++GL ++G  E+   + ++++++G  PN +  + ++  LC  G+  
Sbjct: 344 KGYRGNEFS-YSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPD 402

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A      +   G  PN  T+S+L+  + +   + KA  ++  M + D     + YSILI
Sbjct: 403 EAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILI 462

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML--NGG 348
           +GL K G+LKE   +    L RG+KLDVV +SS++  +     V + ++ +++ML  N  
Sbjct: 463 NGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPK 522

Query: 349 FLPNVISYSILIKGLCQQGRLVEA------------------CGLFGQVL---------- 380
             P+V++Y+IL+   C +  +  A                  C +F + L          
Sbjct: 523 LQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDG 582

Query: 381 -----------IRR-----------------LEPSLLTYSSLIDGFCKSGKLRDGFS 409
                      I+R                 L P   T++  +   CK  K+R   S
Sbjct: 583 REFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKTIS 639



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 124/283 (43%), Gaps = 28/283 (9%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           GK  +  +L+++ + + GC      YS LI+   R GK DE+ E    M + G   +   
Sbjct: 364 GKGEHGMQLWKEMV-EKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFT 422

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVI 205
              LM    ++  + +   + + M           Y  L+NGL + G ++ A  + +Q++
Sbjct: 423 YSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQML 482

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK--PNVVTFSTLINAFCKEAK 263
            RG   ++V  + ++   C    +     LF+ +L   PK  P+VVT++ L+NAFC +  
Sbjct: 483 SRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNS 542

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLF-KAGRLKEGNELLLTALDRGLKLDVVVFS 322
           + +A  + N M++    PD I   I +  L       ++G E L   + R +K    V +
Sbjct: 543 VSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGA 602

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           S                  + ML    LP   ++++ ++ LC+
Sbjct: 603 S---------------NIIEVMLQKFLLPKPSTWALAVQQLCK 630


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 232/493 (47%), Gaps = 42/493 (8%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRG 175
           +I+   ++ ++D++  I   M D GI  +PDL     ++  L  S ++ +  ++   M  
Sbjct: 251 IIKELCKMKEMDKAESIVQKMVDSGI--APDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 308

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            G       Y  L++G    G+   +  + +Q+   G +P +  CN  +  L  +G+   
Sbjct: 309 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 368

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCK---EAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           A  +FD ++L GPKP+++++ST  +  C             ++NLM+   + P+  +++I
Sbjct: 369 AKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNI 428

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+   + G + +   +     ++G+  D V F++V+ +   IG +  A+  ++ M++ G
Sbjct: 429 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 488

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY-SSLIDGFCKSGKLRDG 407
             P+   Y  LI+G C  G LV+A  L  +++ + + P  + Y SS+I+  CK G++ +G
Sbjct: 489 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 548

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             + D M++ G +P                              N+  FN+LM+G C + 
Sbjct: 549 KDIMDMMVQTGQRP------------------------------NVVTFNSLMEGYCLVG 578

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
              +   L   M    I+P+   +  L+ G    G +  A+ +F  ML +G+ P  + YS
Sbjct: 579 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 638

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            I+HGLF+ +  +    MF  M  +G    I  Y V+L  L +    D A  L  +L   
Sbjct: 639 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 698

Query: 588 GLEPDIITYNTII 600
            ++ DIIT+N +I
Sbjct: 699 NVKFDIITFNIVI 711



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 245/523 (46%), Gaps = 30/523 (5%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           +I  L +S   D A  V ++MV + G   N               Y+ LI  Y   G  +
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMV-EAGTRPNSIT------------YNSLIHGYSISGMWN 332

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM--RGKGFCVYEFLMNG 187
           ESV +F  MS  G+  + D     +  L       +   +  +M  +G    +  +  N 
Sbjct: 333 ESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNA 392

Query: 188 ----LLRKGVIENAFH-MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
                    V+   +H +   ++ +G  PN    N ++      G +  A  +F+ +   
Sbjct: 393 SWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 452

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G  P+ VTF+T+I++ C+  +L+ A   +N M+++ + P   +Y  LI G    G L + 
Sbjct: 453 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 512

Query: 303 NELLLTALDRGLKLD-VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
            EL+   +++ +    V  FSS+++     G V       D M+  G  PNV++++ L++
Sbjct: 513 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 572

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C  G + EA  L   +    +EP+   Y +L+DG+CK+G++ D  +++ +M+ +G+KP
Sbjct: 573 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 632

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
            +V+ S++++GL        A + F + +      ++  +  ++ G CR    TD   + 
Sbjct: 633 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCR-NNCTDEANML 691

Query: 477 M--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +  L  M N+K D+IT  ++I  +   G    A  LF  +   GL P++ TYS +I  L 
Sbjct: 692 LEKLFAM-NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI 750

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           K ++     ++F  +E++G A D  + N ++ ML+ +  +  A
Sbjct: 751 KEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 793



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 214/471 (45%), Gaps = 47/471 (9%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+ G ++ G ++ A  +  +++++G +P I+ CN I+K LC   ++  A S+   ++  G
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG----------- 292
             P++ T+S +I+  CK   ++KA ++   M+E    P+ I Y+ LI G           
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 293 ------------------------LFKAGRLKEGNELLLTALDRGLKLDVVVFSS----V 324
                                   LFK GR  E   +  + + +G K D++ +S+    V
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWV 395

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
              YV +  V      ++ ML  G  PN   ++ILI    + G + +A  +F  +  + +
Sbjct: 396 CYWYVTVVWV-MWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 454

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQS 444
            P  +T++++I   C+ G+L D    +++M+  G+ P   V   LI G          + 
Sbjct: 455 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 514

Query: 445 VRMTLI------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           +   ++      P +  F+++++  C+  R  +   +  +M     +P+V+T   L+ G 
Sbjct: 515 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 574

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G++  A  L   M   G+ P+   Y  ++ G  K   I   L +F+ M   GV P  
Sbjct: 575 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 634

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            +Y+++L+ L +     AA K+F ++ + G    I TY  ++ G C  N+C
Sbjct: 635 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCR-NNC 684



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 187/421 (44%), Gaps = 37/421 (8%)

Query: 51  AIQFFKWTHNCVSSP---NIAQLIHVLLQSDMRDVASHVFDKMVIQFGKT---------- 97
           +++ FK   +C   P   N    IH L +    + A  +FD MV++  K           
Sbjct: 334 SVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNAS 393

Query: 98  --------------YNFFRL-FRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
                         +N F L     +      ++ LI  Y R G +D+++ IF  M + G
Sbjct: 394 WVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 453

Query: 143 IYLSPDLV--QRLMSCLVD----SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIEN 196
           +   PD V    ++S L       +++ ++  +          VY  L+ G    G +  
Sbjct: 454 MI--PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVK 511

Query: 197 AFHMHRQVIQRGFVPNIVTC-NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           A  +  +++ +   P  V   + I+  LC  G++     + D+++  G +PNVVTF++L+
Sbjct: 512 AKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLM 571

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
             +C    +E+AF L + M  + + P+  IY  L+DG  K GR+ +   +    L +G+K
Sbjct: 572 EGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVK 631

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
              V++S ++           A + +  M+  G   ++ +Y +++ GLC+     EA  L
Sbjct: 632 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 691

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
             ++    ++  ++T++ +I    K G+ ++   L+D +   GL P+    S++I  L+ 
Sbjct: 692 LEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 751

Query: 436 D 436
           +
Sbjct: 752 E 752



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 4/227 (1%)

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI----NGLMGDA 437
           R   P++ TY+ LID + +  +   G ++   ++K GL PD    SL+     +G +  A
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 229

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
              F + +   ++P + I N+++   C++K       +   M    I PD+ T++++I G
Sbjct: 230 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 289

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +    ++  A  +  QM++ G  P+ ITY+++IHG       +  + +FK M   GV P 
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +   N  ++ L K    + A  +F  +  +G +PDII+Y+T     C
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVC 396



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/308 (20%), Positives = 137/308 (44%), Gaps = 29/308 (9%)

Query: 34  QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ 93
           +A  +++ ++  + P P +++F    N     N+ +   V    D+ D        M++Q
Sbjct: 511 KAKELISEMMNKDIPPPGVKYFSSIIN-----NLCKEGRVAEGKDIMD--------MMVQ 557

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
            G+  N               ++ L+E Y  +G ++E+  +   M+ +GI  +  +   L
Sbjct: 558 TGQRPNVVT------------FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 605

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +     +  +     + R M  KG      +Y  +++GL +      A  M  ++I+ G 
Sbjct: 606 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 665

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
             +I T   +L  LC N     A+ L + L  +  K +++TF+ +I+A  K  + ++A +
Sbjct: 666 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 725

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L++ +    LVP++  YS++I  L K    +E + L ++    G   D  + + ++   +
Sbjct: 726 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLL 785

Query: 330 GIGDVGRA 337
              +V +A
Sbjct: 786 NKAEVAKA 793


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 198/392 (50%), Gaps = 16/392 (4%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P IVT   ++++LC       A  +F  ++ +  KP+   ++ +I   CK  KL+ A
Sbjct: 9   GITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLA 68

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
              +  M++   +PD + Y++L+  LFKA + ++G+++    L +G   ++V +++V++ 
Sbjct: 69  ASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNG 128

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF----GQVLIRR 383
           Y   G + +A+    R+   G  P+   YS LI GLC+  R  EA  LF    G V    
Sbjct: 129 YCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGDV---- 184

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----AL 438
               ++ Y+S I G CK+GKL +  +++  MI+ G  PD V  +++I  L  D     A 
Sbjct: 185 --QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAK 242

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT-VKLFMLMGMYNIKPDVITHTVLIRG 497
               Q++    +P + +   L+DG C+ +R  +  V L  ++   +  P V+T++ +I G
Sbjct: 243 ELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDG 302

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +     L  A ++  +M + G  PDV+TY+AII    K   +     +F+ M   G A D
Sbjct: 303 LCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASD 362

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           +  YN+L+    +   +D A+ +  ++  RG+
Sbjct: 363 VVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 179/402 (44%), Gaps = 74/402 (18%)

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G  P +VTF +LI   C+     KA Q+++ M++M + PD  +Y+++I  L K      
Sbjct: 8   AGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN---- 63

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
                        KLD+                  A   +++M+  G LP+ ++Y++L+ 
Sbjct: 64  -------------KLDL------------------AASYFEQMVQSGCLPDKVTYTVLVH 92

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
            L +  +  +   +F ++L +   P L+TY+++++G+CK+G++    SL   +   G  P
Sbjct: 93  SLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSP 152

Query: 422 DAVVCSLLINGLMG----DALRFFFQ-----------------------------SVRMT 448
              + S LI+GL      +  R  F+                             +V + 
Sbjct: 153 SGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVK 212

Query: 449 LI-----PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
           +I     P+   +N ++   C+  R ++  +L          P V   TVL+ G+     
Sbjct: 213 MIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRR 272

Query: 504 LSSAILLFFQMLKRG-LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
           +  A ++  +ML+ G   P V+TYSA+I GL K   +     + + M R G  PD+  Y 
Sbjct: 273 VEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYT 332

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +++   K   LD A +LF ++ +RG   D++ YN +I GYC
Sbjct: 333 AIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYC 374



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 158/345 (45%), Gaps = 41/345 (11%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++ L +    E    +  +++ +G  P +VT   ++   C  G+I  A SL   L
Sbjct: 86  TYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRL 145

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P+   +STLI+  CK  + E+A +L+   M    V D+I+Y+  I GL KAG+L
Sbjct: 146 KGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE--MAAGDVQDVIVYTSFISGLCKAGKL 203

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   + +  ++ G   D V ++ ++ +      V  A +  D+ +    +P V   ++L
Sbjct: 204 DEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVL 263

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           + GLC+  R+ EAC     +L R LE     PS++TYS++IDG CK+ +L D + +   M
Sbjct: 264 VDGLCKSRRVEEAC----VILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKM 319

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            + G  PD V                               +  ++D  C++ R  +  +
Sbjct: 320 RRAGCVPDVVT------------------------------YTAIIDAFCKVGRLDEARE 349

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           LF  M       DV+ + +LIRG      +  AI +  +M  RG+
Sbjct: 350 LFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
            A  +  Q+I     P+      ++  LC   ++  A+S F+ ++  G  P+ VT++ L+
Sbjct: 32  KALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLV 91

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           ++  K  K E+  Q++  M+     P+L+ Y+ +++G  KAGR+ +   L+      G  
Sbjct: 92  HSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRS 151

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
               ++S+++D          A + ++  +  G + +VI Y+  I GLC+ G+L EA  +
Sbjct: 152 PSGSLYSTLIDGLCKHDRHEEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAV 209

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
             +++     P  ++Y+ +I   CK  ++ +   L D  ++R   P   VC++L++GL  
Sbjct: 210 HVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC- 268

Query: 436 DALRFFFQSV---RM----TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
            + R     V   RM       P++  ++ ++DG C+  R  D   +   M      PDV
Sbjct: 269 KSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDV 328

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
           +T+T +I      G L  A  LF +M +RG   DV+ Y+ +I G  +   +   + M + 
Sbjct: 329 VTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEE 388

Query: 549 MERNGV 554
           M   G+
Sbjct: 389 MAGRGI 394



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 166/351 (47%), Gaps = 19/351 (5%)

Query: 38  ILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQF 94
           ++ +L K N    A  +F+        P+      L+H L ++   +    +F++M+ + 
Sbjct: 55  VIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSK- 113

Query: 95  GKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM 154
           G +                 Y+ ++  Y + G+ID+++ +   +   G   S  L   L+
Sbjct: 114 GHSPELV------------TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLI 161

Query: 155 SCLVDSNSVGQYYKLCRAMRG--KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
             L   +   +  +L     G  +   VY   ++GL + G ++ A  +H ++I+ G  P+
Sbjct: 162 DGLCKHDRHEEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPD 221

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
            V+ N I+  LC + ++  A  L D  +     P V   + L++  CK  ++E+A  +  
Sbjct: 222 PVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE 281

Query: 273 LMMEM-DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
            M+E  D  P ++ YS +IDGL KA RL +   +L      G   DVV +++++DA+  +
Sbjct: 282 RMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKV 341

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           G +  A + + RM   G   +V++Y+ILI+G C+  ++ EA  +  ++  R
Sbjct: 342 GRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGR 392



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 7/238 (2%)

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
           L G++    + P+++T+ SLI   C+         ++  MI   +KPDA + +++I  L 
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
               +  A  +F Q V+   +P+   +  L+    +  +     ++F  M      P+++
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+  ++ G    G +  A+ L  ++   G +P    YS +I GL K         +F++ 
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMA 180

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
              G   D+ +Y   ++ L K   LD A  +  ++ + G  PD ++YN II   C  N
Sbjct: 181 --AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 236


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 190/348 (54%), Gaps = 5/348 (1%)

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
           +G  PN +T +TLI   C + ++ +AF  ++ ++ +    D + Y  LI GL K G  + 
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             +LL     + ++L+ V++++V+        V  A   Y  M++ G  PNV++YS LI 
Sbjct: 61  ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G    G+L +A  LF ++++  ++P   T++ L+DGFCK  K+++G +++  M+K+G+ P
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D V  + L++G      +  A   F    +  + P++  +N L++G C++K+    + LF
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 240

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M   NI P+V+T+  LI G++  G +S A+ L  QM  RG+ P+++TY++II  LFK 
Sbjct: 241 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 300

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
             +   + +    +  G+ P +  Y +L++ L K   L  A  +F  L
Sbjct: 301 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 153/274 (55%), Gaps = 5/274 (1%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G + +A   +D+++  GF  + +SY  LI GLC+ G    A  L  +V  + ++ + + Y
Sbjct: 21  GQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMY 80

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
           +++I G CK   + D F LY  M+ +G+ P+ V  S LI+G      + DA+  F + + 
Sbjct: 81  NTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIIL 140

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             + P+ + FN L+DG C+ ++  +   +F +M    I PDV+T+  L+ G      +++
Sbjct: 141 ENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNT 200

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  +F  M + G+ PD+ +Y+ +I+G  K K +   +++F  M    + P++  YN L++
Sbjct: 201 AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLID 260

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            L K   +  AL+L  Q+ DRG+ P+I+TYN+II
Sbjct: 261 GLSKSGRISYALQLVDQMHDRGVPPNILTYNSII 294



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 164/301 (54%), Gaps = 5/301 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  L++GL + G    A  + ++V  +    N V  N ++  +C +  + +A  L+  ++
Sbjct: 45  YGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMV 104

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  PNVVT+S LI+ F    KL+ A  L+N ++  ++ PD   ++IL+DG  K  ++K
Sbjct: 105 SKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMK 164

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           EG  +    + +G+  DVV ++S++D Y  + +V  A   ++ M  GG  P++ SY+ILI
Sbjct: 165 EGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 224

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+  ++ +A  LF ++  + + P+++TY+SLIDG  KSG++     L D M  RG+ 
Sbjct: 225 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVP 284

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ +  + +I+ L     +  A+    +     + P+++ +  L+DG C+  R  D   +
Sbjct: 285 PNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNI 344

Query: 476 F 476
           F
Sbjct: 345 F 345



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 182/345 (52%), Gaps = 5/345 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G+ PN +T N ++K LC+ GQI  A    D L+ +G   + V++ TLI+  CK  +   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L   +    +  + ++Y+ +I G+ K   + +  +L    + +G+  +VV +S+++  
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +  +G +  A+  +++++     P+  +++IL+ G C+  ++ E   +F  ++ + + P 
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           ++TY+SL+DG+    ++    S+++ M + G+ PD    ++LING      +  A+  F 
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +     +IPN+  +N+L+DG  +  R +  ++L   M    + P+++T+  +I  +    
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 301

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            +  AI L  +   +G+ P + TY+ +I GL KG  +    ++F+
Sbjct: 302 QVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFE 346



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 156/286 (54%), Gaps = 16/286 (5%)

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           DL+QR+   LV  N+V                +Y  ++ G+ +   + +AF ++ +++ +
Sbjct: 63  DLLQRVDGKLVQLNAV----------------MYNTVIYGMCKDKHVNDAFDLYSEMVSK 106

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  PN+VT + ++    + G++ +A  LF+ ++L   KP+  TF+ L++ FCK+ K+++ 
Sbjct: 107 GISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEG 166

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             ++ +MM+  ++PD++ Y+ L+DG      +     +  T    G+  D+  ++ +++ 
Sbjct: 167 KTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILING 226

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +  I  V +A+  ++ M     +PNV++Y+ LI GL + GR+  A  L  Q+  R + P+
Sbjct: 227 FCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPN 286

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           +LTY+S+ID   K+ ++    +L      +G++P     ++LI+GL
Sbjct: 287 ILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL 332



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 141/260 (54%), Gaps = 5/260 (1%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G+ PN I+ + LIKGLC +G++ +A     +++        ++Y +LI G CK G+ R  
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L   +  + ++ +AV+ + +I G+     + DA   + + V   + PN+  ++ L+ G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
              + +  D + LF  + + NIKPD  T  +L+ G      +     +F  M+K+G+ PD
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V+TY++++ G    K ++    +F  M + GV PDI  YN+L+N   K   +D A+ LF 
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 583 QLTDRGLEPDIITYNTIICG 602
           ++  + + P+++TYN++I G
Sbjct: 242 EMHCKNIIPNVVTYNSLIDG 261



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 9/229 (3%)

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD--ALRF 440
            P+ +T ++LI G C  G++   F  +D ++  G   D V    LI+GL  +G+  A   
Sbjct: 4   HPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALD 63

Query: 441 FFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
             Q V   L+  N  ++NT++ G C+ K   D   L+  M    I P+V+T++ LI G  
Sbjct: 64  LLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 123

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G L  AI LF +++   + PD  T++ ++ G  K + +  G  +F +M + G+ PD+ 
Sbjct: 124 VVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVV 183

Query: 560 IYNVLLN--MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            YN L++   L+KE N   A  +F  +   G+ PDI +YN +I G+C +
Sbjct: 184 TYNSLVDGYRLVKEVN--TAKSIFNTMAQGGVNPDIRSYNILINGFCKI 230


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 251/516 (48%), Gaps = 37/516 (7%)

Query: 93  QFGKTYNFF-RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           + GK  + F R+  + L      +S ++E + +  ++++++E +  M  + I  S  LV 
Sbjct: 360 ELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVH 419

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQR 207
            ++   + + S     ++      + +  + F+ N +     ++G ++ A    + + Q+
Sbjct: 420 TMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQK 478

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  PN+V  N ++   C    +  A S+F  +L  G +PN  T+S LI+ F K    + A
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNA 538

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMD 326
           + + N M   +   + +IY+ +I+GL K G+  +  E+L   + ++   +    ++S++D
Sbjct: 539 WDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIID 598

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            +V +GD   AV+TY  M   G  PNV++++ LI G C+  R+  A  +  ++    L+ 
Sbjct: 599 GFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL 658

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVR 446
            L  Y +LIDGFCK   ++  ++L+  + + GL                           
Sbjct: 659 DLPAYGALIDGFCKKNDMKTAYTLFSELPELGL--------------------------- 691

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
              +PN+ ++N+L+ G   L +    + L+  M    I  D+ T+T +I G+   G+++ 
Sbjct: 692 ---MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINL 748

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L+ ++L  G+ PD I +  +++GL K         M + M++  V P++ +Y+ ++ 
Sbjct: 749 ASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIA 808

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
              +E NL+ A +L  ++ ++G+  D   +N ++ G
Sbjct: 809 GHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 144/623 (23%), Positives = 267/623 (42%), Gaps = 101/623 (16%)

Query: 65  PNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYS--FLIENY 122
           P +  ++  L++S++ D A  +++KMV+               +G  G + +   L+   
Sbjct: 205 PYVNNVLSSLVRSNLIDEAKEIYNKMVL---------------IGVAGDNVTTQLLMRAS 249

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRAMRGK---- 176
           +R  K +E+V+IF  +   G    PD  L    +     +  +     L R MRGK    
Sbjct: 250 LRERKPEEAVKIFRRVMSRGA--EPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVP 307

Query: 177 -GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                Y  ++   +++G +E A  +  +++  G   +++    ++   C   ++G A  L
Sbjct: 308 ASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDL 367

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F+ +   G  P+ V FS ++  FCK  ++EKA + Y  M  + + P  ++   +I G  K
Sbjct: 368 FNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLK 427

Query: 296 A----------------------------------GRLKEGNELLLTALDRGLKLDVVVF 321
           A                                  G++      L     +G++ +VV +
Sbjct: 428 AESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFY 487

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI--------------------- 360
           +++M A+  + ++  A   +  ML  G  PN  +YSILI                     
Sbjct: 488 NNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA 547

Query: 361 --------------KGLCQQGRLVEACGLFGQVLI-RRLEPSLLTYSSLIDGFCKSGKLR 405
                          GLC+ G+  +A  +   ++  +R   S  +Y+S+IDGF K G   
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTD 607

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
                Y  M + G  P+ V  + LING      M  AL    +   M L  +L  +  L+
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALI 667

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG C+         LF  +    + P+V  +  LI G  + G + +AI L+ +M+  G++
Sbjct: 668 DGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
            D+ TY+ +I GL K  NI++   ++  +   G+ PD  ++ VL+N L K+     A K+
Sbjct: 728 CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKM 787

Query: 581 FGQLTDRGLEPDIITYNTIICGY 603
             ++  + + P+++ Y+T+I G+
Sbjct: 788 LEEMKKKDVTPNVLLYSTVIAGH 810



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 152/677 (22%), Positives = 301/677 (44%), Gaps = 72/677 (10%)

Query: 3   LKFKNLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHN-- 60
           L+F +  +V         SE++ H+ D     A  I   L + N+P  A+Q+  W     
Sbjct: 53  LEFPHKTSVPNHSPLTSTSETENHVDD-----ARVIEVLLGRRNDPVSALQYCNWVKPLH 107

Query: 61  --CVSSPNIAQLIHVLLQS-DMRDVASHVF------DKMVIQFGKTYNFFRLFRDSLGDF 111
             C        LIH+LL S    D AS++       +  +I      N      DS   F
Sbjct: 108 RLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNNLV----DSSKRF 163

Query: 112 GCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
           G +     +++L+  Y+R  ++D +V+ F  M D  +      V  ++S LV SN + + 
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223

Query: 167 YKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
            ++   M   G        + LM   LR+   E A  + R+V+ RG  P+ +  +  ++ 
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283

Query: 223 LCINGQIGNASSLF-DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            C    +  A  L  ++   +G   +  T++++I AF KE  +E+A ++ + M+   +  
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
            +I  + L++G  K   L +  +L     + GL  D V+FS +++ +    ++ +A++ Y
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403

Query: 342 DRMLNGGFLPNVISYSILIKG----------------------------------LCQQG 367
            RM +    P+ +    +I+G                                   C+QG
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQG 463

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
           ++  A      +  + +EP+++ Y++++   C+   +    S++  M+++GL+P+    S
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS 523

Query: 428 LLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM-LMGM 481
           +LI+G        +A     Q        N  I+NT+++G C++ + +   ++   L+  
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
                   ++  +I G    G   SA+  + +M + G +P+V+T++++I+G  K   + +
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L M   M+   +  D+  Y  L++   K+ ++  A  LF +L + GL P++  YN++I 
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703

Query: 602 GYCSLN--SCLIDGYFK 616
           G+ +L      ID Y K
Sbjct: 704 GFRNLGKMDAAIDLYKK 720



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/495 (22%), Positives = 213/495 (43%), Gaps = 62/495 (12%)

Query: 51  AIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGD 110
           AI+F+    +   +P+ + L+H ++Q  ++  +                   +F DS   
Sbjct: 399 AIEFYMRMKSVRIAPS-SVLVHTMIQGCLKAESPEAA-------------LEIFNDSFES 444

Query: 111 -----FGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV----QRLMSCLVDSN 161
                F C+  FL+  + + GK+D +      M   GI   P++V      L  C + + 
Sbjct: 445 WIAHGFMCNKIFLL--FCKQGKVDAATSFLKMMEQKGI--EPNVVFYNNMMLAHCRMKNM 500

Query: 162 SVGQY---YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
            + +      L + +    F  Y  L++G  +    +NA+ +  Q+    F  N V  N 
Sbjct: 501 DLARSIFSEMLEKGLEPNNF-TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNT 559

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKP-NVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           I+  LC  GQ   A  +   L+       +  +++++I+ F K    + A + Y  M E 
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              P+++ ++ LI+G  K+ R+    E+        LKLD+  + +++D +    D+  A
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
              +  +   G +PNV  Y+ LI G    G++  A  L+ +++   +   L TY+++IDG
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
             K G +     LY  ++  G+ PD ++  +L+NGL     +F   S             
Sbjct: 740 LLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKG-QFLKAS------------- 785

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
                           K+   M   ++ P+V+ ++ +I G   +G+L+ A  L  +ML++
Sbjct: 786 ----------------KMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829

Query: 518 GLTPDVITYSAIIHG 532
           G+  D   ++ ++ G
Sbjct: 830 GIVHDDTVFNLLVSG 844


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 218/436 (50%), Gaps = 10/436 (2%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL---KRLCINGQIGNASSL 235
            +++  ++  L  G    A  + +++I+    PN++TCN +L    R   +  I +A  +
Sbjct: 132 ALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREV 191

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM-EMDLVPDLIIYSILIDGLF 294
           FD ++ +G   +V TF+ L+N +C E KLE A  +   M+ E ++ PD + Y+ ++  + 
Sbjct: 192 FDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMS 251

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K GRL +  +LLL     GL  + V +++++  Y  +G +  A Q  + M     LP++ 
Sbjct: 252 KKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLC 311

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ILI G+C  G + E   L   +   +L+P ++TY++LIDG  + G   +   L + M
Sbjct: 312 TYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQM 371

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI------PNLFIFNTLMDGCCRLKR 468
              G+KP+ V  ++ +  L  +  R         L+      P++  ++TL+    ++  
Sbjct: 372 ENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGD 431

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            +  +++   MG   IK + IT   ++  +  +  +  A  L     KRG   D +TY  
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGT 491

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I G F+ + +     M+  M+R  + P +  +N L+  L      + A++ F +L + G
Sbjct: 492 LIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESG 551

Query: 589 LEPDIITYNTIICGYC 604
           L PD  T+N+II GYC
Sbjct: 552 LLPDDCTFNSIILGYC 567



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 218/433 (50%), Gaps = 10/433 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHM-HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            +  L+NG   +G +E+A  M  R V +    P+ VT N ILK +   G++ +   L   
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLD 265

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G  PN VT++ L+  +CK   L++AFQ+  LM + +++PDL  Y+ILI+G+  AG 
Sbjct: 266 MKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGS 325

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           ++EG EL+       L+ DVV +++++D    +G    A +  ++M N G  PN ++++I
Sbjct: 326 IREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNI 385

Query: 359 LIKGLCQQGRLVEACGLFGQ-VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +K LC++ +  E      + V +    P ++TY +LI  + K G L     +   M ++
Sbjct: 386 SLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445

Query: 418 GLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G+K + +  + +++ L     + +A      + +   I +   + TL+ G  R ++    
Sbjct: 446 GIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKA 505

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            +++  M    I P V T   LI G+   G    A+  F ++ + GL PD  T+++II G
Sbjct: 506 FEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILG 565

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL-TDRGLEP 591
             K   +      +    ++   PD    N+LLN L KE   + AL  F  L T+R  E 
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITER--EV 623

Query: 592 DIITYNTIICGYC 604
           D +TYNT+I  +C
Sbjct: 624 DTVTYNTMISAFC 636



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 197/422 (46%), Gaps = 19/422 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ L+  Y ++G + E+ +I   M    I   PDL     L++ + ++ S+ +  +L   
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNIL--PDLCTYNILINGVCNAGSIREGLELMDV 335

Query: 173 MRG----KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+          Y  L++G    G+   A  +  Q+   G  PN VT N  LK LC   +
Sbjct: 336 MKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEK 395

Query: 229 IGNAS-SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
               +  + +++ + G  P++VT+ TLI A+ K   L  A ++   M +  +  + I  +
Sbjct: 396 REEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLN 455

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            ++D L K  ++ E + LL +A  RG  +D V + +++  Y     V +A + +D M   
Sbjct: 456 TILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRI 515

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
              P V +++ LI GLC  G+   A   F ++    L P   T++S+I G+CK G++   
Sbjct: 516 KITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKA 575

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
           F  Y+  IK   KPD   C++L+NGL    M +    FF ++      +   +NT++   
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDTVTYNTMISAF 635

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF------FQMLKR 517
           C+ K+  +   L   M    ++PD  T+  +I  +   G LS A  L       F  +KR
Sbjct: 636 CKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKR 695

Query: 518 GL 519
            L
Sbjct: 696 NL 697



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 190/381 (49%), Gaps = 10/381 (2%)

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
           +SL    L + P P+   F   ++A+    K   A Q++  M+ + L P+L+  + L+ G
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIG 175

Query: 293 LFK---AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-G 348
           L +   +  +    E+    +  G+ LDV  F+ +++ Y   G +  A+   +RM++   
Sbjct: 176 LVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFN 235

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ ++Y+ ++K + ++GRL +   L   +    L P+ +TY++L+ G+CK G L++ F
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAF 295

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            + + M +  + PD    ++LING+     + + L        + L P++  +NTL+DGC
Sbjct: 296 QIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGC 355

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK-RGLTPD 522
             L  + +  KL   M    +KP+ +TH + ++ +  +           ++++  G +PD
Sbjct: 356 FELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPD 415

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           ++TY  +I    K  ++S  L M + M + G+  +    N +L+ L KE  +D A  L  
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLD 475

Query: 583 QLTDRGLEPDIITYNTIICGY 603
               RG   D +TY T+I GY
Sbjct: 476 SAHKRGYIVDEVTYGTLIMGY 496



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 102/449 (22%), Positives = 197/449 (43%), Gaps = 42/449 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  ++  + +KG + +   +   + + G VPN VT N ++   C  G +  A  + +++
Sbjct: 242 TYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                 P++ T++ LIN  C    + +  +L ++M  + L PD++ Y+ LIDG F+ G  
Sbjct: 302 KQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLS 361

Query: 300 KEGNELLLTALDRGLKL------------------------------------DVVVFSS 323
            E  +L+    + G+K                                     D+V + +
Sbjct: 362 LEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHT 421

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++ AY+ +GD+  A++    M   G   N I+ + ++  LC++ ++ EA  L      R 
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRG 481

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----AL 438
                +TY +LI G+ +  K+   F ++D M +  + P     + LI GL        A+
Sbjct: 482 YIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAM 541

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
             F +     L+P+   FN+++ G C+  R     + +     ++ KPD  T  +L+ G+
Sbjct: 542 EKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
             +G ++   L FF  L      D +TY+ +I    K K +     +   ME   + PD 
Sbjct: 602 CKEG-MTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDR 660

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDR 587
             YN ++  L+++  L  A +L  + + +
Sbjct: 661 FTYNSIITSLMEDGKLSEADELLKKFSGK 689



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 148/324 (45%), Gaps = 28/324 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+ Y+++G +  ++E+   M   GI ++   +  ++  L     V + + L  +  
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAH 478

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G+ V    Y  L+ G  R+  +E AF M  ++ +    P + T N ++  LC +G+  
Sbjct: 479 KRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTE 538

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   FD L   G  P+  TF+++I  +CKE ++EKAF+ YN  ++    PD    +IL+
Sbjct: 539 LAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K G  ++      T +    ++D V +++++ A+     +  A      M      
Sbjct: 599 NGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLE 657

Query: 351 PNVISYSILIKGLCQQGRLVEA-------CGLFGQVL----------------IRRLEPS 387
           P+  +Y+ +I  L + G+L EA        G FG +                    L+  
Sbjct: 658 PDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTE 717

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLY 411
            + YS +I+  C  G+L++  + Y
Sbjct: 718 AIAYSDVINELCSRGRLKEHSTSY 741


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 240/534 (44%), Gaps = 56/534 (10%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
           R+  +D+S+ I   M D  + +S    Q   S L       + + + + ++ K    Y  
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVS---TQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYST 192

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++GL R+  +E+A    R    +   P++V+ N I+   C  G +  A S F  +L  G
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 252

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+V + + LIN  C    + +A +L + M +  + PD + Y+IL  G    G +    
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF-LPNVISYSILIKG 362
           E++   LD+GL  DV+ ++ ++     +G++   +     ML+ GF L ++I  S+++ G
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 372

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP- 421
           LC+ GR+ EA  LF Q+    L P L+ YS +I G CK GK      LYD M  + + P 
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432

Query: 422 ----------------------------------DAVVCSLLINGL-----MGDALRFFF 442
                                             D V+ +++I+G      + +AL  F 
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             +   + P++  FN+L+ G C+ +   +  K+  ++ +Y + P V+++T L+   A+ G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL------------ME 550
           +  S   L  +M   G+ P  +TYS I  GL +G       H+ +             ME
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             G+ PD   YN ++  L +  +L  A      +  R L+    TYN +I   C
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 227/498 (45%), Gaps = 29/498 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           ++ LI     +G I E++E+ + M+  G+   PD V    L         +   +++ R 
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGV--EPDSVTYNILAKGFHLLGMISGAWEVIRD 317

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN-IVTCNKILKRLCING 227
           M  KG       Y  L+ G  + G I+    + + ++ RGF  N I+ C+ +L  LC  G
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +I  A SLF+ +   G  P++V +S +I+  CK  K + A  LY+ M +  ++P+   + 
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+ GL + G L E   LL + +  G  LD+V+++ V+D Y   G +  A++ +  ++  
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V +++ LI G C+   + EA  +   + +  L PS+++Y++L+D +   G  +  
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             L   M   G+ P  V  S++  GL      +  ++    L   +F      + C +  
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGL---CRGWKHENCNHVLRERIF------EKCKQGL 608

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  ++           I PD IT+  +I+ +     LS A +    M  R L     TY+
Sbjct: 609 RDMES---------EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYN 659

Query: 528 AIIHGL-FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            +I  L   G        ++ L E+N      A Y  L+     + + + A+KLF QL  
Sbjct: 660 ILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA-YTTLIKAHCVKGDPEMAVKLFHQLLH 718

Query: 587 RGLEPDIITYNTIICGYC 604
           RG    I  Y+ +I   C
Sbjct: 719 RGFNVSIRDYSAVINRLC 736



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 39/260 (15%)

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N  +YS ++ GLC+Q +L +A         + + PS+++++S++ G+CK G        +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG--------F 237

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            +M K                       FF   ++  L+P+++  N L++G C +    +
Sbjct: 238 VDMAKS----------------------FFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++L   M  + ++PD +T+ +L +G    G +S A  +   ML +GL+PDVITY+ ++ 
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335

Query: 532 GLFKGKNISVGLHMFKLM-----ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           G  +  NI +GL + K M     E N + P     +V+L+ L K   +D AL LF Q+  
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIP----CSVMLSGLCKTGRIDEALSLFNQMKA 391

Query: 587 RGLEPDIITYNTIICGYCSL 606
            GL PD++ Y+ +I G C L
Sbjct: 392 DGLSPDLVAYSIVIHGLCKL 411



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 160/372 (43%), Gaps = 41/372 (11%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKM-- 90
           + +L+ L KT     A+  F        SP++     +IH L +    D+A  ++D+M  
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426

Query: 91  --VIQFGKTYNFF-------------RLFRDSLGDFGCD-----YSFLIENYVRIGKIDE 130
             ++   +T+                R   DSL   G       Y+ +I+ Y + G I+E
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMN 186
           ++E+F  + + GI  S      L+     + ++ +  K+   ++  G       Y  LM+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV---- 242
                G  ++   + R++   G  P  VT + I K LC   +  N + +    +      
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 243 --------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
                   G  P+ +T++T+I   C+   L  AF    +M   +L      Y+ILID L 
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             G +++ +  + +  ++ + L    +++++ A+   GD   AV+ + ++L+ GF  ++ 
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726

Query: 355 SYSILIKGLCQQ 366
            YS +I  LC++
Sbjct: 727 DYSAVINRLCRR 738


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 240/534 (44%), Gaps = 56/534 (10%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
           R+  +D+S+ I   M D  + +S    Q   S L       + + + + ++ K    Y  
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVS---TQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYST 192

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++GL R+  +E+A    R    +   P++V+ N I+   C  G +  A S F  +L  G
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 252

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+V + + LIN  C    + +A +L + M +  + PD + Y+IL  G    G +    
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF-LPNVISYSILIKG 362
           E++   LD+GL  DV+ ++ ++     +G++   +     ML+ GF L ++I  S+++ G
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 372

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP- 421
           LC+ GR+ EA  LF Q+    L P L+ YS +I G CK GK      LYD M  + + P 
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432

Query: 422 ----------------------------------DAVVCSLLINGL-----MGDALRFFF 442
                                             D V+ +++I+G      + +AL  F 
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             +   + P++  FN+L+ G C+ +   +  K+  ++ +Y + P V+++T L+   A+ G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL------------ME 550
           +  S   L  +M   G+ P  +TYS I  GL +G       H+ +             ME
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             G+ PD   YN ++  L +  +L  A      +  R L+    TYN +I   C
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 227/498 (45%), Gaps = 29/498 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           ++ LI     +G I E++E+ + M+  G+   PD V    L         +   +++ R 
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGV--EPDSVTYNILAKGFHLLGMISGAWEVIRD 317

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN-IVTCNKILKRLCING 227
           M  KG       Y  L+ G  + G I+    + + ++ RGF  N I+ C+ +L  LC  G
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +I  A SLF+ +   G  P++V +S +I+  CK  K + A  LY+ M +  ++P+   + 
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            L+ GL + G L E   LL + +  G  LD+V+++ V+D Y   G +  A++ +  ++  
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V +++ LI G C+   + EA  +   + +  L PS+++Y++L+D +   G  +  
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             L   M   G+ P  V  S++  GL      +  ++    L   +F      + C +  
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGL---CRGWKHENCNHVLRERIF------EKCKQGL 608

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  ++           I PD IT+  +I+ +     LS A +    M  R L     TY+
Sbjct: 609 RDMES---------EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYN 659

Query: 528 AIIHGL-FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            +I  L   G        ++ L E+N      A Y  L+     + + + A+KLF QL  
Sbjct: 660 ILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA-YTTLIKAHCVKGDPEMAVKLFHQLLH 718

Query: 587 RGLEPDIITYNTIICGYC 604
           RG    I  Y+ +I   C
Sbjct: 719 RGFNVSIRDYSAVINRLC 736



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 39/260 (15%)

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N  +YS ++ GLC+Q +L +A         + + PS+++++S++ G+CK G        +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG--------F 237

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            +M K                       FF   ++  L+P+++  N L++G C +    +
Sbjct: 238 VDMAKS----------------------FFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++L   M  + ++PD +T+ +L +G    G +S A  +   ML +GL+PDVITY+ ++ 
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335

Query: 532 GLFKGKNISVGLHMFKLM-----ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           G  +  NI +GL + K M     E N + P     +V+L+ L K   +D AL LF Q+  
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIP----CSVMLSGLCKTGRIDEALSLFNQMKA 391

Query: 587 RGLEPDIITYNTIICGYCSL 606
            GL PD++ Y+ +I G C L
Sbjct: 392 DGLSPDLVAYSIVIHGLCKL 411



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 160/372 (43%), Gaps = 41/372 (11%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKM-- 90
           + +L+ L KT     A+  F        SP++     +IH L +    D+A  ++D+M  
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426

Query: 91  --VIQFGKTYNFF-------------RLFRDSLGDFGCD-----YSFLIENYVRIGKIDE 130
             ++   +T+                R   DSL   G       Y+ +I+ Y + G I+E
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMN 186
           ++E+F  + + GI  S      L+     + ++ +  K+   ++  G       Y  LM+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV---- 242
                G  ++   + R++   G  P  VT + I K LC   +  N + +    +      
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 243 --------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
                   G  P+ +T++T+I   C+   L  AF    +M   +L      Y+ILID L 
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             G +++ +  + +  ++ + L    +++++ A+   GD   AV+ + ++L+ GF  ++ 
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726

Query: 355 SYSILIKGLCQQ 366
            YS +I  LC++
Sbjct: 727 DYSAVINRLCRR 738


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/548 (25%), Positives = 256/548 (46%), Gaps = 15/548 (2%)

Query: 71  IHVLLQSDMRDVASHVFDKMV----IQFGKTYNFFRLFRDSLGDFGCDYSFLIENYV--R 124
           + VLLQ +  + A  V   ++      F      F  F  S      D+S+L+ + +   
Sbjct: 435 LRVLLQQNRIETARGVLYSLLRSDSAPFTSPKELFSAFSLSSPSLKHDFSYLLLSVLLNE 494

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFL 184
              I E+ ++F  + + GI+ S D +  L+  LV +        +   +    F   +F+
Sbjct: 495 SKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM 554

Query: 185 MNGLLRKGV----IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
               ++  V    +     +  ++      P +   N ++  LC   Q+ +A  LFD +L
Sbjct: 555 YGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEML 614

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                P+++T++TLI+ +CK+   EK+F++   M   ++ P LI ++ L+ GLFKAG ++
Sbjct: 615 ARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVE 674

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +   +L    D+G   D   FS + D Y        A+  Y+  ++ G   N  + SIL+
Sbjct: 675 DAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILL 734

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC++G++ +A  + G+ + + L P+ + Y+++IDG+ + G L       D M K+G+K
Sbjct: 735 NALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMK 794

Query: 421 PDAVVCSLLINGL--MGDALRFFFQSVRMTL---IPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD +  + LI     +GD      +  +M L    P++  +N L+ G  R         L
Sbjct: 795 PDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDL 854

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M      P+V+++  LI  +     L  A ++   M  RG++P+V  Y+ +I G   
Sbjct: 855 LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCS 914

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              I       + M + G+  ++  YN L++ L     L  A  +  +++ +GL+PD+ T
Sbjct: 915 KGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFT 974

Query: 596 YNTIICGY 603
           YN++I GY
Sbjct: 975 YNSLISGY 982



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/563 (24%), Positives = 263/563 (46%), Gaps = 72/563 (12%)

Query: 100  FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
            F R+  D +      Y+ LI+   ++ ++ ++ ++F  M          L +RL+  L+ 
Sbjct: 575  FNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEM----------LARRLLPSLIT 624

Query: 160  SNSV----------GQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVI 205
             N++           + +K+   M+          +  L+ GL + G++E+A ++  ++ 
Sbjct: 625  YNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMK 684

Query: 206  QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
             +GFVP+  T + +      N +   A  +++  +  G K N  T S L+NA CKE ++E
Sbjct: 685  DQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIE 744

Query: 266  KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLKLDVVVFSSV 324
            KA ++    M   LVP+ ++Y+ +IDG  + G L  G  + + A+++ G+K D + ++ +
Sbjct: 745  KAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLV-GARMKIDAMEKQGMKPDHLAYNCL 803

Query: 325  MDAYVGIGD---------------VGRAVQTYD--------------------RMLNGGF 349
            +  +  +GD               V  +V+TY+                     M + G 
Sbjct: 804  IRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGT 863

Query: 350  LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            +PNV+SY  LI  LC+  +L+EA  +   +  R + P++  Y+ LIDG C  GK+ D F 
Sbjct: 864  MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFR 923

Query: 410  LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
              + M K+G++ + V  + LI+GL     + +A     +  R  L P++F +N+L+ G  
Sbjct: 924  FSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYR 983

Query: 465  RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG-SLSSAILLFFQMLKRGLTPDV 523
                    + L+  M    IKP + T+ +LI     +G  L+  I  F +M    L PD+
Sbjct: 984  FAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKI--FGEM---SLQPDL 1038

Query: 524  ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            + Y+ ++H      ++    ++ K M    +  D   YN L+   +K   L     L  +
Sbjct: 1039 LVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 1098

Query: 584  LTDRGLEPDIITYNTIICGYCSL 606
            +  R +EP+  TY+ I+ G+C +
Sbjct: 1099 MKAREMEPEADTYDIIVKGHCEM 1121



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 193/404 (47%), Gaps = 5/404 (1%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P+  +   +L  L    Q     ++F  +L    +P+   +   I A  K + + K
Sbjct: 511 EGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK 570

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
             +L+N M    + P + IY++LIDGL K  ++K+  +L    L R L   ++ +++++D
Sbjct: 571 GLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLID 630

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            Y   G+  ++ +  +RM      P++I+++ L+KGL + G + +A  +  ++  +   P
Sbjct: 631 GYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVP 690

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFF 441
              T+S L DG+  + K      +Y+  +  GLK +A  CS+L+N L  +     A    
Sbjct: 691 DAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEIL 750

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + +   L+PN  ++NT++DG  R             M    +KPD + +  LIR     
Sbjct: 751 GREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCEL 810

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G + +A     +M  +G++P V TY+ +I G  +         + K ME NG  P++  Y
Sbjct: 811 GDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY 870

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             L+N L K   L  A  +   + DRG+ P++  YN +I G CS
Sbjct: 871 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCS 914



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 221/481 (45%), Gaps = 7/481 (1%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            +S L + Y    K D ++ ++    D G+ ++      L++ L     + +  ++     
Sbjct: 695  FSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREM 754

Query: 175  GKGFCVYEFLMN----GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             KG    E L N    G  RKG +  A      + ++G  P+ +  N +++  C  G + 
Sbjct: 755  AKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDME 814

Query: 231  NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            NA    + + L G  P+V T++ LI  + ++ + +K F L   M +   +P+++ Y  LI
Sbjct: 815  NAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLI 874

Query: 291  DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            + L K  +L E   +     DRG+  +V +++ ++D     G +  A +  + M   G  
Sbjct: 875  NCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIE 934

Query: 351  PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
             N+++Y+ LI GL   G+L EA  +  ++  + L+P + TY+SLI G+  +G ++   +L
Sbjct: 935  LNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIAL 994

Query: 411  YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRA 469
            Y+ M   G+KP      LLI+    + +    +    M+L P+L ++N ++  C  +   
Sbjct: 995  YEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLH-CYAVHGD 1053

Query: 470  TDTV-KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             D    L   M   +I  D  T+  LI G    G L     L  +M  R + P+  TY  
Sbjct: 1054 MDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDI 1113

Query: 529  IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
            I+ G  + K+       ++ M+  G+  D+ I + L++ L +E     A  +  ++  R 
Sbjct: 1114 IVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRK 1173

Query: 589  L 589
            L
Sbjct: 1174 L 1174



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/354 (22%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           F    +L  AF L +  ++ D     ++ S+L++   ++  + E  +L     + G+   
Sbjct: 462 FTSPKELFSAFSLSSPSLKHDF--SYLLLSVLLN---ESKMISEAADLFFALRNEGIFPS 516

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
               + ++D  V        +  +  +L   F P+   Y   I+   +   + +   LF 
Sbjct: 517 SDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFN 576

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--G 435
           ++   R+ P++  Y+ LIDG CK  +++D   L+D M+ R L P  +  + LI+G    G
Sbjct: 577 RMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDG 636

Query: 436 DALRFFFQSVRM---TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
           +  + F    RM    + P+L  FNTL+ G  +     D   +   M      PD  T +
Sbjct: 637 NPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFS 696

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           +L  G +S     +A+ ++   +  GL  +  T S +++ L K   I     +       
Sbjct: 697 ILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAK 756

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           G+ P+  +YN +++   ++ +L  A      +  +G++PD + YN +I  +C L
Sbjct: 757 GLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCEL 810


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/520 (24%), Positives = 251/520 (48%), Gaps = 41/520 (7%)

Query: 93  QFGKTYNFFR-LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           +F K   F   ++++        YS +I +  + GK+D+++E+F  MS+  +  +PD+  
Sbjct: 164 EFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRV--APDVT- 220

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV- 210
                                        Y  L++G L++   + A  +  ++++   V 
Sbjct: 221 ----------------------------CYNILIDGFLKEKDHKMAMQLWDKLLEDSSVY 252

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN+ T N ++  L   G++ +   ++D +     + ++ T+S+LI+  C E  ++KA  +
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESV 312

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           +N ++E     D++ Y+ ++ G  + G++KE  EL      R   +++V ++ ++   + 
Sbjct: 313 FNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLE 371

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G +  A   +  M   G+  +  +Y I I GLC  G + +A G+  +V  +     +  
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYA 431

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMT-- 448
           Y+S+ID  CK  +L +  +L   M K G++ ++ VC+ LI GL+ D+ R    S+ M   
Sbjct: 432 YASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS-RLSDASLLMRGM 490

Query: 449 ----LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
                +P +  +N L+ G C   +  +       M    +KPD+ T+++L+ G+     +
Sbjct: 491 GKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKI 550

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ L+ Q L+ GL PDV+ ++ +IHGL     +   + +   ME      ++  YN L
Sbjct: 551 ELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +    K  + + A  ++G +   GL+PDII+YNTI+ G C
Sbjct: 611 MEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLC 650



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 204/439 (46%), Gaps = 40/439 (9%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  PN+ T N ++K  C   +   A    + +   G KP+V ++ST+IN   K  KL+ A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDA 203

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMD 326
            +L++ M E  + PD+  Y+ILIDG  K    K   +L    L D  +  +V   + ++ 
Sbjct: 204 LELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMIS 263

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G V   ++ +DRM       ++ +YS LI GLC +G + +A  +F +++ R+   
Sbjct: 264 GLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFI 323

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR----------------------------- 417
            ++TY++++ GFC+ GK+++   L+  M +R                             
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWR 383

Query: 418 -----GLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
                G   D       +  L +NG +  AL    +        +++ + +++D  C+ +
Sbjct: 384 LMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKR 443

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  +   L   M  + ++ +      LI G+     LS A LL   M K G  P V++Y+
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYN 503

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I GL +           K M  NG+ PD+  Y++LL  L ++  ++ AL+L+ Q    
Sbjct: 504 ILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQS 563

Query: 588 GLEPDIITYNTIICGYCSL 606
           GLEPD++ +N +I G CS+
Sbjct: 564 GLEPDVMMHNILIHGLCSV 582



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 235/514 (45%), Gaps = 25/514 (4%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           + ++ +L KT     A++ F        +P++     LI   L+     +A  ++DK+ +
Sbjct: 188 STVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKL-L 246

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +    Y   +            ++ +I    + G++D+ ++I+  M              
Sbjct: 247 EDSSVYPNVKT-----------HNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSS 295

Query: 153 LMSCLVDSNSVGQYYKLCRAM-RGKGF---CVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+  L D  +V +   +   +   K F     Y  ++ G  R G I+ +  + R + QR 
Sbjct: 296 LIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN 355

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
            V NIV+ N ++K L  NG+I  A+ ++ ++   G   +  T+   I+  C    + KA 
Sbjct: 356 SV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKAL 414

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            +   +       D+  Y+ +ID L K  RL+E + L+      G++L+  V ++++   
Sbjct: 415 GVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
           +    +  A      M   G LP V+SY+ILI GLC+ G+  EA     ++L   L+P L
Sbjct: 475 IRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDL 534

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
            TYS L+ G C+  K+     L+   ++ GL+PD ++ ++LI+GL     + DA+     
Sbjct: 535 KTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMAN 594

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                   NL  +NTLM+G  +++ +     ++  M    ++PD+I++  +++G+     
Sbjct: 595 MEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHR 654

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
           +S AI  F      G+ P V T++ ++  +   K
Sbjct: 655 VSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRK 688



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 189/406 (46%), Gaps = 42/406 (10%)

Query: 241 LVGPKPNVVTFSTLINAF-----------------------------------CKEAKLE 265
           + G +P + +++TL+NAF                                   CK+ + E
Sbjct: 107 IFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFE 166

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           KA    N M +    PD+  YS +I+ L K G+L +  EL     +R +  DV  ++ ++
Sbjct: 167 KARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILI 226

Query: 326 DAYVGIGDVGRAVQTYDRML-NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           D ++   D   A+Q +D++L +    PNV +++I+I GL + GR+ +   ++ ++     
Sbjct: 227 DGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNER 286

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
           E  L TYSSLI G C  G +    S+++ +++R    D V  + ++ G      + ++L 
Sbjct: 287 EKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLE 346

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            +    +   + N+  +N L+ G     +  +   ++ LM       D  T+ + I G+ 
Sbjct: 347 LWRIMEQRNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLC 405

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G ++ A+ +  ++  +G   DV  Y++II  L K + +    ++ K M ++GV  +  
Sbjct: 406 VNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSH 465

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           + N L+  LI++  L  A  L   +   G  P +++YN +ICG C 
Sbjct: 466 VCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCE 511



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 2/136 (1%)

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           RA D  K   +  ++  +P + ++  L+              LF      G+ P++ TY+
Sbjct: 96  RALDVFK--RMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I    K K           M + G  PD+  Y+ ++N L K   LD AL+LF ++++R
Sbjct: 154 VLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSER 213

Query: 588 GLEPDIITYNTIICGY 603
            + PD+  YN +I G+
Sbjct: 214 RVAPDVTCYNILIDGF 229


>gi|255661038|gb|ACU25688.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 375

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 189/360 (52%), Gaps = 19/360 (5%)

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C+    + A ++YN M E  + PD ++Y+ +++G F+ GR+K   EL      +G + +V
Sbjct: 1   CESGDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGSR-NV 59

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG------RLVEA 372
             F+ +M      G+V + +  ++ M+  GF  + I+Y IL+ GLC+ G       ++E 
Sbjct: 60  ASFNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEI 119

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
               G VL         +YS++I+G CK  KL +  S+   M+K G KP+  V + LING
Sbjct: 120 AEGKGGVL------DAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALING 173

Query: 433 LMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
            +G     DA R F + +     PN+  +NTL++G C+ +R  +   L   M     KP 
Sbjct: 174 FVGASKFEDATRVF-REMGTHCSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPG 232

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           V T+++L++G+     L  AI L+ Q++ +G  PDV  ++ +IHGL       + L ++ 
Sbjct: 233 VSTYSLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYF 292

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            M     AP++  YN L+    K+ +L  AL ++  +   GL+PDII+YN  + G CS N
Sbjct: 293 NMNXWNCAPNLVTYNTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNITLKGLCSCN 352



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 184/351 (52%), Gaps = 7/351 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  ++NG  R G I+N F +   + ++G   N+ + N +++ L  NG++    S+++++
Sbjct: 27  VYNAMLNGYFRVGRIKNCFELWELMGRKG-SRNVASFNIMMRGLFDNGEVDQVISIWELM 85

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +  G   + +T+  L++  CK     K+  +  +      V D   YS +I+GL K  +L
Sbjct: 86  IENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLDAFSYSAMINGLCKEAKL 145

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   +L   +  G K +  V++++++ +VG      A + + R +     PN+++Y+ L
Sbjct: 146 DEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVF-REMGTHCSPNIVTYNTL 204

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+  R  EA  L  ++L +  +P + TYS L+ G C   KL    +L++ +I +G 
Sbjct: 205 INGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKLDMAINLWNQVIAKGF 264

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KPD  + ++LI+GL  +G    AL  +F        PNL  +NTLM+G  +     + + 
Sbjct: 265 KPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTYNTLMEGFYKDGDLRNALA 324

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           ++  +    ++PD+I++ + ++G+ S   +S AIL     + + L P +IT
Sbjct: 325 IWAHILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDAVTKKLVPTIIT 375



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 172/348 (49%), Gaps = 11/348 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++  Y R+G+I    E++  M   G          +M  L D+  V Q   +   M 
Sbjct: 28  YNAMLNGYFRVGRIKNCFELWELMGRKGSRNVASF-NIMMRGLFDNGEVDQVISIWELMI 86

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF      Y  L++GL + G    + H+      +G V +  + + ++  LC   ++ 
Sbjct: 87  ENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLDAFSYSAMINGLCKEAKLD 146

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+   ++  G KPN   ++ LIN F   +K E A +++   M     P+++ Y+ LI
Sbjct: 147 EAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVFR-EMGTHCSPNIVTYNTLI 205

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K  R  E  +L+   L++G K  V  +S +M        +  A+  +++++  GF 
Sbjct: 206 NGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKLDMAINLWNQVIAKGFK 265

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V  ++ILI GLC  G+   A  L+  +      P+L+TY++L++GF K G LR+  ++
Sbjct: 266 PDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTYNTLMEGFYKDGDLRNALAI 325

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           + ++++ GL+PD +  ++ + GL     +  A+ F   +V   L+P +
Sbjct: 326 WAHILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDAVTKKLVPTI 373



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 127/279 (45%), Gaps = 38/279 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    +  K+DE+V + + M   G   +  +   L++  V ++      ++ R M 
Sbjct: 132 YSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVFREMG 191

Query: 175 ---GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
                    Y  L+NGL +      A+ + ++++++G+ P + T + ++K LC+  ++  
Sbjct: 192 THCSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKLDM 251

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A +L++ ++  G KP+V   + LI+  C   K + A  LY  M   +  P+L+ Y+ L++
Sbjct: 252 AINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTYNTLME 311

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G +K G L+                                    A+  +  +L  G  P
Sbjct: 312 GFYKDGDLR-----------------------------------NALAIWAHILRNGLQP 336

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
           ++ISY+I +KGLC   R+  A       + ++L P+++T
Sbjct: 337 DIISYNITLKGLCSCNRISGAILFLHDAVTKKLVPTIIT 375


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 216/429 (50%), Gaps = 26/429 (6%)

Query: 192 GVIENAFHMHRQVIQR-GFVPNIVTCNKIL--------------------KRLCINGQIG 230
           G++E A  ++  V++   + P+++ CN +L                    K LC  G++ 
Sbjct: 143 GLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLE 202

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               L +     G  PN++ ++TLI+ +CK+  +E A  L+  +     +P +  Y  +I
Sbjct: 203 EGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAII 262

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G  K G  K  + LL+    RGL ++V V+++++DA    G + +AV+T + M+  G  
Sbjct: 263 NGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCK 322

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++++Y+ LI G C+ G++ EA  L  Q L + L P+  +Y+ LI  +CK G      + 
Sbjct: 323 PDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNW 382

Query: 411 YDNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M +RG KPD V    L++GL+  G+   AL    + +   + P+  I+N LM G C+
Sbjct: 383 LIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCK 442

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +      L   M   ++ PD   +  L+ G    G+L  A  LF   +++G+ P ++ 
Sbjct: 443 KFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVG 502

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+A+I G  K   +   +     M++  +APD   Y+ +++  +K+ +LD A K+F ++ 
Sbjct: 503 YNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV 562

Query: 586 DRGLEPDII 594
               +P+++
Sbjct: 563 KMKCKPNVM 571



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 224/451 (49%), Gaps = 21/451 (4%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAM 173
           S +I+ Y   G +++++E++ ++     Y  PD++    L++ LV         KL R  
Sbjct: 133 SIVIQAYSDSGLVEKALELYYFVLKTYTYF-PDVIACNSLLNMLV---------KLGRIE 182

Query: 174 RGKGF-CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
             + F C+   ++ GL ++G +E    +      +G +PNI+  N ++   C  G +  A
Sbjct: 183 IARKFTCI---MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMA 239

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
           + LF  L L G  P V T+  +IN FCK+   +   +L   M    L  ++ +Y+ +ID 
Sbjct: 240 NGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDA 299

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
            +K G + +  E +   ++ G K D+V +++++      G V  A Q  ++ L  G +PN
Sbjct: 300 RYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPN 359

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             SY+ LI   C+QG    A     ++  R  +P L+TY +L+ G   +G++    ++ +
Sbjct: 360 KFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIRE 419

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M++RG+ PDA + ++L++GL     +  A     + +  +++P+ F++ TL+DG  R  
Sbjct: 420 KMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNG 479

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
              +  KLF L     + P ++ +  +I+G    G +  A+    +M KR L PD  TYS
Sbjct: 480 NLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYS 539

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
            +I G  K  ++     MF+ M +    P++
Sbjct: 540 TVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 570



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 183/385 (47%), Gaps = 26/385 (6%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM-DLVPDLIIYS----------------- 287
           P     S +I A+     +EKA +LY  +++     PD+I  +                 
Sbjct: 127 PTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARK 186

Query: 288 ---ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
              I++ GL K G+L+EG +L+     +G   +++ +++++D Y   GD+  A   +  +
Sbjct: 187 FTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIEL 246

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
              GFLP V +Y  +I G C++G       L  ++  R L  ++  Y+++ID   K G +
Sbjct: 247 KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHI 306

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
                  + MI+ G KPD V  + LI     +G + +A +   Q++   L+PN F +  L
Sbjct: 307 VKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPL 366

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           +   C+           + M     KPD++T+  L+ G+   G +  A+ +  +ML+RG+
Sbjct: 367 IHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGV 426

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PD   Y+ ++ GL K   +     +   M    V PD  +Y  L++  I+  NLD A K
Sbjct: 427 FPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARK 486

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           LF    ++G+ P I+ YN +I GYC
Sbjct: 487 LFELTIEKGMNPGIVGYNAMIKGYC 511



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 164/323 (50%), Gaps = 9/323 (2%)

Query: 176 KGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           KGF      Y  ++NG  +KG  +    +  ++  RG   N+   N I+     +G I  
Sbjct: 249 KGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK 308

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A    + ++  G KP++VT++TLI+  C++ K+ +A QL    +   L+P+   Y+ LI 
Sbjct: 309 AVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIH 368

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
              K G     +  L+   +RG K D+V + +++   V  G+V  A+   ++ML  G  P
Sbjct: 369 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 428

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +   Y+IL+ GLC++ +L  A  L  ++L + + P    Y++L+DGF ++G L +   L+
Sbjct: 429 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF 488

Query: 412 DNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           +  I++G+ P  V  + +I      G+M DA+    +  +  L P+ F ++T++DG  + 
Sbjct: 489 ELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQ 548

Query: 467 KRATDTVKLFMLMGMYNIKPDVI 489
                  K+F  M     KP+V+
Sbjct: 549 HDLDGAQKMFREMVKMKCKPNVM 571



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 125/302 (41%), Gaps = 28/302 (9%)

Query: 331 IGDVGRAVQTYDRMLNGGFLP--NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
           I DV   ++ +D +  G +    N  +YS L+K L +     E   +   + +  + P+ 
Sbjct: 70  IRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTR 129

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK-PDAVVCSLLIN---------------- 431
              S +I  +  SG +     LY  ++K     PD + C+ L+N                
Sbjct: 130 EAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTC 189

Query: 432 ---------GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
                    G + +  +          IPN+  +NTL+DG C+         LF+ + + 
Sbjct: 190 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 249

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
              P V T+  +I G   +G   +   L  +M  RGLT +V  Y+ II   +K  +I   
Sbjct: 250 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 309

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +   + M   G  PDI  YN L++   ++  +  A +L  Q   +GL P+  +Y  +I  
Sbjct: 310 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 369

Query: 603 YC 604
           YC
Sbjct: 370 YC 371



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 12/222 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+   V  G++D ++ I   M + G++    +   LMS L     +     L   M 
Sbjct: 398 YGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEML 457

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +       VY  L++G +R G ++ A  +    I++G  P IV  N ++K  C  G + 
Sbjct: 458 DQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMK 517

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A +  + +      P+  T+ST+I+ + K+  L+ A +++  M++M   P+      ++
Sbjct: 518 DAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN------VM 571

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
           DGL   G L     L   A     +L  + +SS++D Y+  G
Sbjct: 572 DGL--QGLLLIIPSLFAFANMECSELHCINYSSILDQYLPQG 611


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 236/461 (51%), Gaps = 16/461 (3%)

Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC-----VY 181
           + D    + A     GI  +      L+  L   N V     L + +  +  C     +Y
Sbjct: 122 RTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMY 181

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             +M+GL +KG  + AF + R + Q    P+    N ++   C +G +  A+SL + +  
Sbjct: 182 GTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQ 241

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
               P+++T+++LI+   K ++ EK   L+  M+ +++ PD+  ++ +IDGL K G++++
Sbjct: 242 KNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVED 301

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             E++   +++G++ + + ++ VMD Y   G +GRA + +D M++ G  P++ISY+ LI 
Sbjct: 302 AEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALIN 361

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G  ++ ++ +A  LF ++    L+PS++T S L+ G  + G+       +D M   G  P
Sbjct: 362 GYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIP 421

Query: 422 DAVV-CSLL----INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC---RLKRATDTV 473
           +    C+LL     NGL+ +A+  F +  R     N+ I+  +++G C   +L +A  T 
Sbjct: 422 NLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATF 481

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
           +   L+G++   PDVIT+T +I G   +G L  A  +  +M   G  PD  TY+ I+ G 
Sbjct: 482 EKLPLIGLH---PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGF 538

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           F+   +S      K +     + + A   +L++++ ++ +L
Sbjct: 539 FRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSL 579



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 223/454 (49%), Gaps = 43/454 (9%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF----------DVLLLV- 242
           +++AF + RQ++    +P+ V+ +K+LK L       +  S+F          D   L  
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 243 ------------------------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
                                   G   N VTF+TLI     E K++ A  L+  ++  +
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 279 LV-PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL-KLDVVVFSSVMDAYVGIGDVGR 336
           +  PD ++Y  ++DGL K G  ++  +LL   +++G+ K D  +++ V+DA+   G +  
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLL-RLMEQGITKPDTCIYNIVIDAFCKDGMLDG 231

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A    + M      P++I+Y+ LI GL +  +  +   LF +++   + P + T++S+ID
Sbjct: 232 ATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVID 291

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
           G CK GK+ D   +   MI++G++P+ +  +++++G      MG A R F   +   + P
Sbjct: 292 GLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEP 351

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           ++  +  L++G    K+    ++LF  +    +KP ++T +VL+RG+   G    A + F
Sbjct: 352 DIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFF 411

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M   G  P++ T+  ++ G FK   +   +  F  +ER     +I IY  ++N L K 
Sbjct: 412 DEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKN 471

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             LD A   F +L   GL PD+ITY  +I GYC 
Sbjct: 472 GKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQ 505



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 209/405 (51%), Gaps = 8/405 (1%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKL 264
           ++G   N VT   +++ L    ++ +A  LF  L+     +P+ V + T+++  CK+   
Sbjct: 135 KKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHT 194

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           +KAF L  LM +    PD  IY+I+ID   K G L     LL     + +  D++ ++S+
Sbjct: 195 QKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSL 254

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D    +    +    +  M++    P+V +++ +I GLC++G++ +A  +   ++ + +
Sbjct: 255 IDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGV 314

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
           EP+ +TY+ ++DG+C  G++     ++D+MI +G++PD +  + LING      M  A++
Sbjct: 315 EPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQ 374

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM-LMGMYNIKPDVITHTVLIRGI 498
            F +  +  L P++   + L+ G   + R T+  K+F   M      P++ TH  L+ G 
Sbjct: 375 LFREISQNGLKPSIVTCSVLLRGLFEVGR-TECAKIFFDEMQAAGHIPNLYTHCTLLGGY 433

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G +  A+  F ++ +R    ++  Y+A+I+GL K   +      F+ +   G+ PD+
Sbjct: 434 FKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDV 493

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             Y  +++   +E  LD A  +  ++ D G  PD  TYN I+ G+
Sbjct: 494 ITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGF 538



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 6/211 (2%)

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIP-NLFIFNT 458
           L D FSL+  M+     P AV  S L+  L+      ++   F+ +    IP + F  +T
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           +++ CC + R      +  +     I  + +T T LIRG+ ++  +  A+ LF ++++  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 519 L-TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           +  PD + Y  ++ GL K  +      + +LME+    PD  IYN++++   K+  LD A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
             L  ++  + + PDIITY ++I G   L+ 
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQ 263


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 215/449 (47%), Gaps = 22/449 (4%)

Query: 180  VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
             Y  L+N L +KG +E    +  ++ +RGF PN+   N ++  LC       A  +   +
Sbjct: 1050 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1109

Query: 240  LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
               G  P+++TF+TLI   C E  + KA       +  +L P+ + Y+ LI G    G L
Sbjct: 1110 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1169

Query: 300  KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               ++LL+  + RG   DVV F +++   V  G V  A+   ++M      P+V  Y++L
Sbjct: 1170 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1229

Query: 360  IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
            I GLC++  L  A  +  ++L + ++P    Y++LIDGF +S  L D   +++ M  +G+
Sbjct: 1230 ISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 1289

Query: 420  KPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             PD V C+ +I      G+M +A+       ++  IP+ F + T++ G  +       ++
Sbjct: 1290 CPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 1349

Query: 475  LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
                M     KP+V+T++ LI G    G   SA  LF  M    L+P+V+TY+ +I  LF
Sbjct: 1350 WLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLF 1409

Query: 535  -KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK---------ECNL------DAAL 578
             K K +  GL+ F+ M  N  +P+    + L+N L            CN       DA L
Sbjct: 1410 KKDKVLRAGLY-FETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALL 1468

Query: 579  KLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             +F +L     +P    YN II   C  N
Sbjct: 1469 VVFKKLVFDIGDPRNSAYNAIIFSLCRHN 1497



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 211/454 (46%), Gaps = 41/454 (9%)

Query: 192  GVIENAFHMHRQV-IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL---------- 240
            G++  A  M  +V  Q G +P +  CN++LK L    +  +A  L+D +L          
Sbjct: 921  GMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYS 980

Query: 241  -------------------------LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
                                       G  P+VV ++ LI+ +C+   + +   L   M 
Sbjct: 981  TCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEME 1040

Query: 276  EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
                +P L+ Y  LI+ L K G L++   L L    RG   +V +++SV+DA        
Sbjct: 1041 TNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSAT 1100

Query: 336  RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            +A+    +M   G  P++I+++ LI GLC +G + +A     + + R L P+ L+Y+ LI
Sbjct: 1101 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 1160

Query: 396  DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI 450
             GFC  G+L     L   M+ RG  PD V    LI+GL     + +AL    +     + 
Sbjct: 1161 HGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 1220

Query: 451  PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
            P++ I+N L+ G C+ +       +   M   N++PD   +  LI G     +L  A  +
Sbjct: 1221 PDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI 1280

Query: 511  FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
            F  M  +G+ PD+++ +A+I G  +   +S  +     M + G  PD   Y  +++   K
Sbjct: 1281 FEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 1340

Query: 571  ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            + NL+ AL+    +  R  +P+++TY+++I GYC
Sbjct: 1341 QGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1374



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 188/403 (46%), Gaps = 6/403 (1%)

Query: 208  GFVPNIVTCNKILKRLCINGQIGNASSLFD-VLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P       ++      G +G A+ + + V    G  P V   + L+    ++ + + 
Sbjct: 902  GAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDD 961

Query: 267  AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
            A +LY+ M+  D   D     +L+ GL    R++EG +L+      G    VV ++ ++D
Sbjct: 962  ARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLID 1021

Query: 327  AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
             Y   GD+GR +     M   GFLP +++Y  LI  L ++G L +   LF ++  R   P
Sbjct: 1022 GYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSP 1081

Query: 387  SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFF 441
            ++  Y+S+ID  C          +   M   G  PD +  + LI GL  +     A  F 
Sbjct: 1082 NVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 1141

Query: 442  FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
             +++R  L PN   +  L+ G C          L + M      PDV+T   LI G+   
Sbjct: 1142 REAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVA 1201

Query: 502  GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
            G +S A+++  +M +R + PDV  Y+ +I GL K + +    ++ + M    V PD  +Y
Sbjct: 1202 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVY 1261

Query: 562  NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              L++  I+  NL  A K+F  +  +G+ PDI++ N +I GYC
Sbjct: 1262 ATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYC 1304



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/403 (21%), Positives = 182/403 (45%), Gaps = 29/403 (7%)

Query: 96   KTYNFFR-LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--R 152
            K  +F R   R  L      Y+ LI  +   G++  + ++   M  MG   +PD+V    
Sbjct: 1136 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM--MGRGHTPDVVTFGA 1193

Query: 153  LMSCLVDSNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
            L+  LV +  V +   +   M  +       +Y  L++GL +K ++  A ++  +++++ 
Sbjct: 1194 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKN 1253

Query: 209  FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
              P+      ++     +  +G+A  +F+ +   G  P++V+ + +I  +C+   + +A 
Sbjct: 1254 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAI 1313

Query: 269  QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
               + M ++  +PD   Y+ +I G  K G L      L   + R  K +VV +SS+++ Y
Sbjct: 1314 LCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGY 1373

Query: 329  VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
               GD   A   +  M      PNV++Y+ILI  L ++ +++ A   F  +L+    P+ 
Sbjct: 1374 CKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPND 1433

Query: 389  LTYSSLIDGF------------CKSGKLRDGFSL--------YDNMIKRGLKPDAVVCSL 428
            +T   L++G             C + ++    +L        +D    R    +A++ SL
Sbjct: 1434 VTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSL 1493

Query: 429  LINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
              + ++ +AL F  +  +   +PN   F +L+ G C + ++ +
Sbjct: 1494 CRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVN 1536



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 3/189 (1%)

Query: 423  AVVCSLLINGLMGDALRFFFQSVRMTL--IPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            A+V +    G++G A     + VR     +P +   N L+      +R  D  KL+  M 
Sbjct: 912  ALVAAYADAGMLGKATEMC-ERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEML 970

Query: 481  MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              +   D  +  VL+RG+  +  +   + L       G  P V+ Y+ +I G  +  ++ 
Sbjct: 971  GKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMG 1030

Query: 541  VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             GL +   ME NG  P +  Y  L+N L K+ +L+    LF ++  RG  P++  YN++I
Sbjct: 1031 RGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVI 1090

Query: 601  CGYCSLNSC 609
               C+  S 
Sbjct: 1091 DALCNCRSA 1099


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 236/550 (42%), Gaps = 93/550 (16%)

Query: 115 YSFLI--ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           Y+F I   +  +  K+DE+++++A M++MG+   PD                        
Sbjct: 225 YTFAIVTRSLFQAKKVDEALQVWAEMTEMGV--KPD------------------------ 258

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP-NIVTCNKILKRLCINGQIGN 231
            RG     Y   + GL   G  + A+ +  Q I R  VP   +  N ++  LC   ++  
Sbjct: 259 ARG-----YSSFLIGLCDCGKYDLAYVI-LQEINREKVPVEAMAYNMVMDGLCKEMRLDE 312

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L +     G  P+V  +S LI ++CK   L  A   Y  M+   +  +  I S L+ 
Sbjct: 313 AEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQ 372

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
              K G   E     L   D GL LD V+++  MD Y   G++  AV+  + M  GG  P
Sbjct: 373 CFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTP 432

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           + I Y+ LI G C +G +  A  +F ++L   +EP ++TY+ L  GFCKSG + + F L 
Sbjct: 433 DKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLL 492

Query: 412 DNMIKRGLKPDAV----------------------------------------VCSLLIN 431
           D M  +GL+P+++                                        VC  L++
Sbjct: 493 DRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLS 552

Query: 432 GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           G    A   F +  R   + + F  + L++  CR+        +  +M  +++ PDVI++
Sbjct: 553 GWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISY 612

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           + LI      G +  A L F  M++RGL+ DVI Y+ +++G  K   +     +F  M  
Sbjct: 613 SKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTN 672

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAAL-----------------KLFGQLTDRGLEPDII 594
            G+ PD+  Y VLL+  +KE  L                     KL   + D  +EPD+ 
Sbjct: 673 LGIKPDVIAYTVLLDGHLKE-TLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVP 731

Query: 595 TYNTIICGYC 604
            Y  +I G C
Sbjct: 732 CYTVLIDGKC 741



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 232/475 (48%), Gaps = 25/475 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL----VDSNSVGQYYKLC 170
           YS+LI +Y ++G +  +V+ +  M   GI  +  +V  L+ C     + S ++  + K  
Sbjct: 332 YSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFK 391

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +       +Y   M+   + G +  A  +  ++   G  P+ +    ++   C+ G++ 
Sbjct: 392 DSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQ 451

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA  +F+ +L    +P++VT++ L + FCK   + + F L + M +  L P+ + Y I I
Sbjct: 452 NAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAI 511

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G L E   L     ++G+    V++SS++  Y+  G    A   + R+   G L
Sbjct: 512 VGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNL 571

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +  S S LI  LC+ G +  A  +   +L   + P +++YS LI  +C++G +      
Sbjct: 572 VDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLW 631

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + +M++RGL  D +V ++L+NG      + +A + F Q   + + P++  +  L+DG  +
Sbjct: 632 FHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLK 691

Query: 466 --LKRATDTV----KLFMLMGMYN----------IKPDVITHTVLIRGIASQGSLSSAIL 509
             L++  + +    + F+L   +N          I+PDV  +TVLI G      L  A  
Sbjct: 692 ETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARE 751

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           LF +ML++GLTPD   Y+A+I+G      IS    + + M   G+ PD   ++VL
Sbjct: 752 LFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 806



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 111/505 (21%), Positives = 219/505 (43%), Gaps = 79/505 (15%)

Query: 179 CVYEFLMNGLLRKGV----IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           C   F+++ L++  +    ++    +   + + G VP++ T N +LK +   G+     +
Sbjct: 151 CSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLA 210

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL----------- 283
            ++ +      P+V TF+ +  +  +  K+++A Q++  M EM + PD            
Sbjct: 211 AYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLC 270

Query: 284 ------------------------IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
                                   + Y++++DGL K  RL E  +LL     +G   DV 
Sbjct: 271 DCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVY 330

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            +S ++ +Y  +G++  AV  Y+ M++ G   N    S L++   + G   EA   F + 
Sbjct: 331 GYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKF 390

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
               L    + Y+  +D +CK+G + +   L + M   GL PD +  + LI+G      M
Sbjct: 391 KDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEM 450

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A + F + ++  + P++  +N L  G C+     +   L   M    ++P+ +T+ + 
Sbjct: 451 QNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIA 510

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG---------------------- 532
           I G    G+LS A +LF  + ++G+    + YS+++ G                      
Sbjct: 511 IVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGN 570

Query: 533 -------------LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
                        L +  N+    ++ K+M  + V PD+  Y+ L+++  +  ++D A  
Sbjct: 571 LVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHL 630

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
            F  +  RGL  D+I Y  ++ GYC
Sbjct: 631 WFHDMVQRGLSVDVIVYTILMNGYC 655



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 160/329 (48%), Gaps = 33/329 (10%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD- 159
           D + D G +     Y   I  + R G + E+  +F  + + GI    D ++ + S +V  
Sbjct: 493 DRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGI----DHIEVMYSSMVCG 548

Query: 160 ---SNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
              S      Y L   +  +G  V  F    L+N L R G ++ A ++ + +++   VP+
Sbjct: 549 YLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPD 608

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +++ +K++   C NG +  A   F  ++  G   +V+ ++ L+N +CK  +L++A QL+ 
Sbjct: 609 VISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFV 668

Query: 273 LMMEMDLVPDLIIYSILIDGLFKA-------GRLKE---------GNELLLTALDRGLKL 316
            M  + + PD+I Y++L+DG  K        G  KE          N+LL +  D  ++ 
Sbjct: 669 QMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEP 728

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           DV  ++ ++D       +  A + +D ML  G  P+  +Y+ LI G C QG + +A  L 
Sbjct: 729 DVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLL 788

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
            +++ + +EP  LT+S L     +S K++
Sbjct: 789 QEMIDKGIEPDELTFSVLNQSSLRSRKIQ 817



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 12/167 (7%)

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN------IKPDVITHTVLIRGIA 499
           R+ ++P+++ +N L      LK   +T +  M++  YN      + PDV T  ++ R + 
Sbjct: 182 RLGVVPSVWTWNLL------LKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLF 235

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
               +  A+ ++ +M + G+ PD   YS+ + GL       +   + + + R  V  +  
Sbjct: 236 QAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAM 295

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            YN++++ L KE  LD A KL      +G  PD+  Y+ +I  YC +
Sbjct: 296 AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKM 342


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 245/510 (48%), Gaps = 42/510 (8%)

Query: 103 LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS 162
           +++ S+G     Y   I   V+ G I++++ +F  M++    +      R +  L+  + 
Sbjct: 1   MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60

Query: 163 VG---QYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQR---GFVPN 212
           +     YY+  R +  +GF +    Y   ++ L       N   +H  ++     GFVP+
Sbjct: 61  LHLAHHYYR--RHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPD 118

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           I   N  L  LC   ++  A  LF  +   G  P+VV+++ +I+A C   + ++A +++ 
Sbjct: 119 IWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWR 178

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            +++  L PD      L+ GL   GR+    EL++  +  G+K++ +V+++++D +  +G
Sbjct: 179 RLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMG 238

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
            V +A++    M   G +P++++Y+IL+   C++G + EA  L   +    +EP L +Y+
Sbjct: 239 RVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYN 298

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPN 452
            L+ GFCK+           NM+ R                   A     + ++   + +
Sbjct: 299 ELLKGFCKA-----------NMVDR-------------------AHLMMVERMQTKGMCD 328

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  +NT++   C+ +R     +LF  M    I+PD++T  +LI     +GS      L  
Sbjct: 329 VVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLD 388

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M K  + PD I Y+A++  L K   + V   +F+ M  NGV PD+  YN LLN   K  
Sbjct: 389 EMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTS 448

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            +  A+ LF ++  +GL PD +TY  I+ G
Sbjct: 449 RVMDAMHLFDEMQSKGLYPDEVTYKLIVGG 478



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 179/364 (49%), Gaps = 10/364 (2%)

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMD---LVPDLIIYSILIDGLFKAGRLKEGNELL 306
           T+S  I+A C          +++L+++MD    VPD+  ++  ++ L +  RL+   EL 
Sbjct: 83  TYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELF 142

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
            +   +G   DVV ++ ++DA         A + + R+++ G  P+  +   L+ GLC  
Sbjct: 143 HSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSG 202

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           GR+  A  L   V+   ++ + L Y++LIDGFC+ G++     +   M + G  PD V  
Sbjct: 203 GRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTY 262

Query: 427 SLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           ++L+N     G++ +A+R      R  + P+L+ +N L+ G C+     D   L M+  M
Sbjct: 263 NILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCK-ANMVDRAHLMMVERM 321

Query: 482 YNIKP-DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                 DV+++  +I              LF +M  +G+ PD++T++ +I    +  +  
Sbjct: 322 QTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTH 381

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           V   +   M +  V PD   Y  +++ L K   +D A  +F  + + G+ PD+I+YN ++
Sbjct: 382 VVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALL 441

Query: 601 CGYC 604
            G+C
Sbjct: 442 NGFC 445



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 168/326 (51%), Gaps = 8/326 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+      + DE+ +++  + D G  LSPD      L+  L     V   Y+L   
Sbjct: 157 YTIIIDALCNAKRFDEAAKVWRRLIDKG--LSPDYKACVALVVGLCSGGRVDLAYELVVG 214

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +   G      VY  L++G  R G ++ A  +   + + G VP++VT N +L   C  G 
Sbjct: 215 VIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGM 274

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L + +   G +P++ +++ L+  FCK   +++A  +    M+   + D++ Y+ 
Sbjct: 275 VDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNT 334

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I    KA R ++G EL      +G++ D+V F+ ++DA++  G      +  D M    
Sbjct: 335 VITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMR 394

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP+ I Y+ ++  LC+ G++  A  +F  ++   + P +++Y++L++GFCK+ ++ D  
Sbjct: 395 VLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAM 454

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM 434
            L+D M  +GL PD V   L++ GL+
Sbjct: 455 HLFDEMQSKGLYPDEVTYKLIVGGLI 480



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 182/396 (45%), Gaps = 13/396 (3%)

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN---LMME 276
           + +L   G I  A  LFD +     +   V ++  I    + ++L  A   Y    +   
Sbjct: 17  ISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRG 76

Query: 277 MDLVPDLIIYSILIDGLFKAGR---LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
             L+P    YS  I  L  A     L   + LLL     G   D+  F++ ++       
Sbjct: 77  FSLLP--FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNR 134

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           +  A++ +  M + G  P+V+SY+I+I  LC   R  EA  ++ +++ + L P      +
Sbjct: 135 LETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVA 194

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MG---DALRFFFQSVRMT 448
           L+ G C  G++   + L   +IK G+K +++V + LI+G   MG    A++      R  
Sbjct: 195 LVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTG 254

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
            +P+L  +N L++ CC      + V+L   M    ++PD+ ++  L++G      +  A 
Sbjct: 255 CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAH 314

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           L+  + ++     DV++Y+ +I    K +    G  +F+ M   G+ PD+  +N+L++  
Sbjct: 315 LMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAF 374

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           ++E +     KL  ++T   + PD I Y  ++   C
Sbjct: 375 LREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLC 410



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 13/300 (4%)

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           + + S +   V  G + +A+  +D+M         + Y+  I  L +  RL  A   + +
Sbjct: 11  LAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRR 70

Query: 379 VLIRR---LEPSLLTYSSLIDGFCKSGK---LRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            +I R   L P   TYS  I   C +     L    SL  +M   G  PD    +  +N 
Sbjct: 71  HVIPRGFSLLP--FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNL 128

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           L     +  AL  F         P++  +  ++D  C  KR  +  K++  +    + PD
Sbjct: 129 LCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPD 188

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
                 L+ G+ S G +  A  L   ++K G+  + + Y+A+I G  +   +   + +  
Sbjct: 189 YKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKA 248

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            M R G  PD+  YN+LLN   +E  +D A++L   +   G+EPD+ +YN ++ G+C  N
Sbjct: 249 FMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKAN 308



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 85/165 (51%), Gaps = 4/165 (2%)

Query: 167 YKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
           Y+L   M GKG       +  L++  LR+G       +  ++ +   +P+ +    ++  
Sbjct: 349 YELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDH 408

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
           LC NG++  A S+F  ++  G  P+V++++ L+N FCK +++  A  L++ M    L PD
Sbjct: 409 LCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPD 468

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            + Y +++ GL +  ++     +    ++RG  L+  +  ++++A
Sbjct: 469 EVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNA 513


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 214/404 (52%), Gaps = 50/404 (12%)

Query: 204 VIQRGFVPNIVTCNKILKRLC------------ING--QIGN---ASSLFDVLLLVGPKP 246
           +++RG++P+IVT N ++K LC            I+G  ++G+   A  +F+ +   G  P
Sbjct: 36  ILRRGYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIP 95

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           NV+++S+L++ FC   KLE++ +L+N M++  + P+L+ +++LID L K G++ E  +LL
Sbjct: 96  NVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLL 155

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              + RG+ LD+V ++S++D +  IGD+  A + +  M + G   N ISY+ILI G C+ 
Sbjct: 156 EVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKI 215

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
            ++ EA  L+ ++      P++ TYS+L+ G  ++GK+ D   L+  M   G+  D+ + 
Sbjct: 216 WKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIY 275

Query: 427 SLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
            + ++GL  + + F                              + ++LF  +  YN K 
Sbjct: 276 VIFLDGLCKNGVLF------------------------------EAMELFNELKSYNFKL 305

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           D  +++ LI G+   G +  A   F Q+ + GL P+V+T + +IHG  + + +     +F
Sbjct: 306 DFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILF 365

Query: 547 KLMER---NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           + ME+   NG  PDI  YN LL    +   L+  + L  ++  R
Sbjct: 366 EKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 205/409 (50%), Gaps = 26/409 (6%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P++ T N +   LC   ++    +    +L  G  P++VT++TLI   C+  ++  A
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
                               I+IDGL K G   E  E+      +G+  +V+ +SS++  
Sbjct: 65  ------------------TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 106

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +   G +  + + ++ M++ G  PN++ +++LI  LC++G+++EA  L    + R +   
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILD 166

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           L+TY+SLIDGFCK G L     L+ +M  +G + + +  ++LING      + +A+  + 
Sbjct: 167 LVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYN 226

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +  ++   PN+  ++TL+ G  +  +  D  KLF +M    I  D   + + + G+   G
Sbjct: 227 EMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNG 286

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            L  A+ LF ++       D  +YS +I GL K   + +    FK + + G+ P++   N
Sbjct: 287 VLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCN 346

Query: 563 VLLNMLIKECNLDAALKLF---GQLTDRGLEPDIITYNTIICGYCSLNS 608
           ++++   +   +D A  LF    ++ + G  PDIITYNT++ G+C  N 
Sbjct: 347 IMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNK 395



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 180/358 (50%), Gaps = 12/358 (3%)

Query: 169 LCRAMR-GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           LCR  R     C+   +++GL + G  + A  +  ++  +G +PN+++ + ++   C  G
Sbjct: 55  LCRVHRISVATCI---IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAG 111

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++  +  LF+ ++  G +PN+V F+ LI+  CKE K+ +A +L  + ++  ++ DL+ Y+
Sbjct: 112 KLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYN 171

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LIDG  K G L    +L L+   +G + + + ++ +++ Y  I  V  A+  Y+ M   
Sbjct: 172 SLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQV 231

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PNV +YS L+ GL Q G++ +A  LFG +    +      Y   +DG CK+G L + 
Sbjct: 232 GKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEA 291

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L++ +     K D    S LI+GL        A  FF Q  +  L PN+   N ++ G
Sbjct: 292 MELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHG 351

Query: 463 CCRLKRATDTVKLFMLMGMYN---IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            CR+++      LF  M         PD+IT+  L+RG      L   + L  +M KR
Sbjct: 352 FCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 179/373 (47%), Gaps = 23/373 (6%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L G  P++ T + L N  C   ++ +       ++    +PD++ Y+ LI GL +  R+ 
Sbjct: 3   LAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRIS 62

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
                             V    ++D    +G    A + ++ M   G +PNVISYS L+
Sbjct: 63  ------------------VATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLV 104

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C  G+L E+  LF +++ + ++P+L+ ++ LID  CK GK+ +   L +  I+RG+ 
Sbjct: 105 HGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGII 164

Query: 421 PDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            D V  + LI+G   +GD   A + F          N   +  L++G C++ +  + + L
Sbjct: 165 LDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNL 224

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           +  M     +P+V T++ L+ G+   G +  A  LF  M   G++ D   Y   + GL K
Sbjct: 225 YNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCK 284

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              +   + +F  ++      D   Y+ L++ L K   ++ A + F QL+  GL+P+++T
Sbjct: 285 NGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVT 344

Query: 596 YNTIICGYCSLNS 608
            N +I G+C +  
Sbjct: 345 CNIMIHGFCRVEQ 357



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 177/346 (51%), Gaps = 23/346 (6%)

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           L PDL   +IL + L    R+ EG   +   L RG   D+V +++++     +  +    
Sbjct: 6   LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRIS--- 62

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
                          ++  I+I GLC+ G   EA  +F ++  + + P++++YSSL+ GF
Sbjct: 63  ---------------VATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGF 107

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNL 453
           C +GKL +   L++ M+ +G++P+ V  ++LI+     G + +A +    +++  +I +L
Sbjct: 108 CCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDL 167

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +N+L+DG C++   +   KLF+ M     + + I++T+LI G      +  A+ L+ +
Sbjct: 168 VTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNE 227

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M + G  P+V TYS ++ GL +   +     +F +M+ +G++ D  IY + L+ L K   
Sbjct: 228 MPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGV 287

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           L  A++LF +L     + D  +Y+ +I G C      I   F  Q+
Sbjct: 288 LFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQL 333



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 180/388 (46%), Gaps = 55/388 (14%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           +I  L +    D A  +F++M  Q G   N               YS L+  +   GK++
Sbjct: 68  IIDGLCKVGHEDEAKEIFEEMKAQ-GMIPNVI------------SYSSLVHGFCCAGKLE 114

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
           ES  +F  M D G+   P+LVQ                             +  L++ L 
Sbjct: 115 ESKRLFNEMVDQGV--QPNLVQ-----------------------------FNVLIDILC 143

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           ++G +  A  +    IQRG + ++VT N ++   C  G + +A  LF  +   G + N +
Sbjct: 144 KEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEI 203

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           +++ LIN +CK  K+E+A  LYN M ++   P++  YS L+ GL + G++ + N+L    
Sbjct: 204 SYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVM 263

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
              G+ +D  ++   +D     G +  A++ ++ + +  F  +  SYS LI GLC+ G++
Sbjct: 264 KASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKV 323

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK---RGLKPDAVVC 426
             A   F Q+    L+P+++T + +I GFC+  ++     L++ M K    G  PD +  
Sbjct: 324 EIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITY 383

Query: 427 SLLINGLMGDALRFFFQSVRMTLIPNLF 454
           + L        LR F +S ++  + NL 
Sbjct: 384 NTL--------LRGFCESNKLEEVVNLL 403



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 17/139 (12%)

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M +  + PD+ T  +L   + +   +S  +     +L+RG  PD++TY+ +I GL +   
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 539 ISVGL-----------------HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           ISV                    +F+ M+  G+ P++  Y+ L++       L+ + +LF
Sbjct: 61  ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120

Query: 582 GQLTDRGLEPDIITYNTII 600
            ++ D+G++P+++ +N +I
Sbjct: 121 NEMVDQGVQPNLVQFNVLI 139



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 38/191 (19%)

Query: 91  VIQFGKTYNFFRLF----RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLS 146
           ++Q GK  +  +LF       +    C Y   ++   + G + E++E+F  +      L 
Sbjct: 247 LLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLD 306

Query: 147 PDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
                                          F  Y  L++GL + G +E A+   +Q+ Q
Sbjct: 307 -------------------------------FESYSRLIDGLCKAGKVEIAWEFFKQLSQ 335

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV---GPKPNVVTFSTLINAFCKEAK 263
            G  PN+VTCN ++   C   Q+  A+ LF+ +  +   G  P+++T++TL+  FC+  K
Sbjct: 336 EGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNK 395

Query: 264 LEKAFQLYNLM 274
           LE+   L + M
Sbjct: 396 LEEVVNLLHKM 406



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 12/77 (15%)

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD---RGLEPDIITYNTIICGYC- 604
           M   G++PD+   N+L N L   CNL+   +    +T    RG  PDI+TYNT+I G C 
Sbjct: 1   MHLAGLSPDLFTLNILANCL---CNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCR 57

Query: 605 ----SLNSC-LIDGYFK 616
               S+ +C +IDG  K
Sbjct: 58  VHRISVATCIIIDGLCK 74


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 142/582 (24%), Positives = 254/582 (43%), Gaps = 106/582 (18%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS----NSVGQYYKLCRAMRGKGFCVYEF 183
           +DE+ ++++ M   G   S   V RL+  LVDS     ++  +  +  +        Y  
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
            +   +    ++  F + + +++ G  P++   N +L  LC   +I +A  LFD ++   
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN VT++TLI+ +CK   +E+A      M E ++  +L+ Y+ L++GL  +GR+ +  
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282

Query: 304 ELLLT----------------------ALDRGL------KLDVVVFSSVMDAYVGIGDVG 335
           E+LL                       A D GL      ++D   +  +++    +G + 
Sbjct: 283 EVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIE 342

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           +A +   +++  G  P+ ISY+IL+   CQ+G + +A     Q+  R LEP+ +T++++I
Sbjct: 343 KAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVI 402

Query: 396 DGFCKSGKLRDG-----------------------------------FSLYDNMIKRGLK 420
             FC++G++                                      F   D M K G+K
Sbjct: 403 SKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIK 462

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLI-----PNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ +    LIN L  D      + V   +I     PN  I+N L++  C L +  D  + 
Sbjct: 463 PNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRF 522

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M    I   ++T+  LI G+   G +  A  LF QM  +G  PDVITY+++I G  K
Sbjct: 523 FDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAK 582

Query: 536 GKNISVGLHMFKLME-------------------RNGV---------------APDIAIY 561
             N    L ++  M+                   + GV                PD  +Y
Sbjct: 583 SVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVY 642

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           N ++    ++ N+  A+ L  Q+ D+G++ D +TYN++I  Y
Sbjct: 643 NEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAY 684



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 148/616 (24%), Positives = 278/616 (45%), Gaps = 38/616 (6%)

Query: 13  RSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIH 72
           RS+N+      +T +    F +  A+ A++I +     A+ + K     V   ++ +   
Sbjct: 123 RSVNRLL----RTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFE 178

Query: 73  VLLQSDMRD-VASHVFDKMVIQFG-----KTYNFFRLFRD----SLGDFGCDYSFLIENY 122
            L++S ++D +   VF   ++  G     +  +  +LF +    ++      Y+ LI+ Y
Sbjct: 179 -LMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGY 237

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC--- 179
            ++G I+E++     M +  +  +      L++ L  S  V    ++   M G GF    
Sbjct: 238 CKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGG 297

Query: 180 ----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
               V++   NG    G+ +       ++ +R +         +L  LC  G+I  A  +
Sbjct: 298 FLSFVFDDHSNGAGDDGLFDGK---EIRIDERTYCI-------LLNGLCRVGRIEKAEEV 347

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
              L+  G  P+ ++++ L+NA+C+E  ++KA      M E  L P+ I ++ +I    +
Sbjct: 348 LAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCE 407

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G +      +   +++G+   V  ++S+++ Y   G   R  +  D M   G  PNVIS
Sbjct: 408 TGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVIS 467

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  LI  LC+  +L++A  +   ++ R + P+   Y+ LI+  C   KL+D F  +D MI
Sbjct: 468 YGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMI 527

Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
           + G+    V  + LINGL     +  A   F Q       P++  +N+L+ G  +     
Sbjct: 528 QSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQ 587

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             ++L+  M +  IKP V T   LI     +G ++    +F +ML+  L PD   Y+ +I
Sbjct: 588 KCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMD-KMFQEMLQMDLVPDQFVYNEMI 646

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +   +  N+   + + + M   GV  D   YN L+   +++  +     L   +  +GL 
Sbjct: 647 YSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLV 706

Query: 591 PDIITYNTIICGYCSL 606
           P + TYN +I G C L
Sbjct: 707 PKVDTYNILIKGLCDL 722



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/479 (22%), Positives = 220/479 (45%), Gaps = 70/479 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+    R+G+I+++ E+ A + + G+  +P  +                        
Sbjct: 328 YCILLNGLCRVGRIEKAEEVLAKLVENGV--TPSKIS----------------------- 362

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+N   ++G ++ A     Q+ +RG  PN +T N ++ + C  G++ +A +
Sbjct: 363 ------YNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAET 416

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
               ++  G  P V T+++LIN + ++    + F+  + M +  + P++I Y  LI+ L 
Sbjct: 417 WVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLC 476

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  +L +   +L   + RG+  +  +++ +++A   +  +  A + +D M+  G    ++
Sbjct: 477 KDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLV 536

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ LI GL + GR+ +A  LF Q+  +   P ++TY+SLI G+ KS   +    LYD M
Sbjct: 537 TYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKM 596

Query: 415 IKRGLKPDAVVCSLLINGLMGDAL----RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              G+KP       LI     + +    + F + ++M L+P+ F++N             
Sbjct: 597 KILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNE------------ 644

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
                                  +I   A  G++  A+ L  QM+ +G+  D +TY+++I
Sbjct: 645 -----------------------MIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLI 681

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
               + + +S   H+   M+  G+ P +  YN+L+  L    + + A   + ++ +RGL
Sbjct: 682 LAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGL 740



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/446 (23%), Positives = 202/446 (45%), Gaps = 39/446 (8%)

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
           +++ A  ++  + + GFVP+  + N++L+ L  +       ++F  ++  G +P+ V + 
Sbjct: 102 MLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYG 161

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
             + A      L+K F+L   M++  + P +  Y++++ GL K  R+K+  +L    + R
Sbjct: 162 KAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQR 221

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            +  + V +++++D Y  +G +  A+   +RM       N+++Y+ L+ GLC  GR+ +A
Sbjct: 222 NMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDA 281

Query: 373 C-------------------------------GLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
                                           GLF    IR  E    TY  L++G C+ 
Sbjct: 282 REVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDER---TYCILLNGLCRV 338

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMT---LIPNLFIF 456
           G++     +   +++ G+ P  +  ++L+N     GD  +    + +M    L PN   F
Sbjct: 339 GRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITF 398

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           NT++   C              M    + P V T+  LI G   +G          +M K
Sbjct: 399 NTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDK 458

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G+ P+VI+Y ++I+ L K + +     +   M   GV+P+  IYN+L+        L  
Sbjct: 459 AGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKD 518

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICG 602
           A + F ++   G++  ++TYNT+I G
Sbjct: 519 AFRFFDEMIQSGIDATLVTYNTLING 544



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 184/397 (46%), Gaps = 35/397 (8%)

Query: 251 FSTLINAFCKEAK-LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           FS  +   C  +K L++A  LY+ M +   VP     + L+  L  +   ++   +    
Sbjct: 89  FSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADV 148

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           +D G + D V +   + A V + D+ +  +    M+  G  P+V +Y++++ GLC+  R+
Sbjct: 149 IDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRI 208

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  LF +++ R + P+ +TY++LIDG+CK G + +     + M ++ ++ + V  + L
Sbjct: 209 KDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSL 268

Query: 430 INGLMG-----DALRFFFQSVRMTLIPN---LFIFNT----------------------- 458
           +NGL G     DA     +      +P     F+F+                        
Sbjct: 269 LNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTY 328

Query: 459 --LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
             L++G CR+ R     ++   +    + P  I++ +L+     +G +  AIL   QM +
Sbjct: 329 CILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEE 388

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           RGL P+ IT++ +I    +   +       + M   GV+P +  YN L+N   ++ +   
Sbjct: 389 RGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVR 448

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
             +   ++   G++P++I+Y ++I   C  +  LID 
Sbjct: 449 CFEFLDEMDKAGIKPNVISYGSLINCLCK-DRKLIDA 484



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 69/153 (45%)

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
           F  + L+  C   K   +   L+  M      P   +   L+R +         + +F  
Sbjct: 88  FFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFAD 147

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           ++  G  PD + Y   +      K++  G  + K M ++G+ P +  YN++L  L K   
Sbjct: 148 VIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRR 207

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +  A KLF ++  R + P+ +TYNT+I GYC +
Sbjct: 208 IKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKV 240



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 100/253 (39%), Gaps = 48/253 (18%)

Query: 96  KTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
           K  + FR F D +   G D     Y+ LI    R G++ ++ ++F  M+  G   +PD++
Sbjct: 515 KLKDAFRFF-DEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC--NPDVI 571

Query: 151 --QRLMSCLVDS-------------------NSVGQYYKLCRAMRGKGFC---------- 179
               L+S    S                    +VG ++ L  A R +G            
Sbjct: 572 TYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEML 631

Query: 180 ---------VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                    VY  ++      G +  A  +H+Q++ +G   + VT N ++     + ++ 
Sbjct: 632 QMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVS 691

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
               L D +   G  P V T++ LI   C       A+  Y  M+E  L+ ++ +   LI
Sbjct: 692 EIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLI 751

Query: 291 DGLFKAGRLKEGN 303
            GL + G L+E  
Sbjct: 752 SGLREEGMLREAQ 764


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 236/550 (42%), Gaps = 93/550 (16%)

Query: 115 YSFLI--ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA 172
           Y+F I   +  +  K+DE+++++A M++MG+   PD                        
Sbjct: 343 YTFAIVTRSLFQAKKVDEALQVWAEMTEMGV--KPD------------------------ 376

Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP-NIVTCNKILKRLCINGQIGN 231
            RG     Y   + GL   G  + A+ +  Q I R  VP   +  N ++  LC   ++  
Sbjct: 377 ARG-----YSSFLIGLCDCGKYDLAYVI-LQEINREKVPVEAMAYNMVMDGLCKEMRLDE 430

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L +     G  P+V  +S LI ++CK   L  A   Y  M+   +  +  I S L+ 
Sbjct: 431 AEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQ 490

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
              K G   E     L   D GL LD V+++  MD Y   G++  AV+  + M  GG  P
Sbjct: 491 CFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTP 550

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           + I Y+ LI G C +G +  A  +F ++L   +EP ++TY+ L  GFCKSG + + F L 
Sbjct: 551 DKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLL 610

Query: 412 DNMIKRGLKPDAV----------------------------------------VCSLLIN 431
           D M  +GL+P+++                                        VC  L++
Sbjct: 611 DRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLS 670

Query: 432 GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           G    A   F +  R   + + F  + L++  CR+        +  +M  +++ PDVI++
Sbjct: 671 GWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISY 730

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           + LI      G +  A L F  M++RGL+ DVI Y+ +++G  K   +     +F  M  
Sbjct: 731 SKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTN 790

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAAL-----------------KLFGQLTDRGLEPDII 594
            G+ PD+  Y VLL+  +KE  L                     KL   + D  +EPD+ 
Sbjct: 791 LGIKPDVIAYTVLLDGHLKE-TLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVP 849

Query: 595 TYNTIICGYC 604
            Y  +I G C
Sbjct: 850 CYTVLIDGKC 859



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 232/475 (48%), Gaps = 25/475 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL----VDSNSVGQYYKLC 170
           YS+LI +Y ++G +  +V+ +  M   GI  +  +V  L+ C     + S ++  + K  
Sbjct: 450 YSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFK 509

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +       +Y   M+   + G +  A  +  ++   G  P+ +    ++   C+ G++ 
Sbjct: 510 DSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQ 569

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA  +F+ +L    +P++VT++ L + FCK   + + F L + M +  L P+ + Y I I
Sbjct: 570 NAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAI 629

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G L E   L     ++G+    V++SS++  Y+  G    A   + R+   G L
Sbjct: 630 VGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNL 689

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +  S S LI  LC+ G +  A  +   +L   + P +++YS LI  +C++G +      
Sbjct: 690 VDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLW 749

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + +M++RGL  D +V ++L+NG      + +A + F Q   + + P++  +  L+DG  +
Sbjct: 750 FHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLK 809

Query: 466 --LKRATDTV----KLFMLMGMYN----------IKPDVITHTVLIRGIASQGSLSSAIL 509
             L++  + +    + F+L   +N          I+PDV  +TVLI G      L  A  
Sbjct: 810 ETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARE 869

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           LF +ML++GLTPD   Y+A+I+G      IS    + + M   G+ PD   ++VL
Sbjct: 870 LFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 924



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/505 (21%), Positives = 219/505 (43%), Gaps = 79/505 (15%)

Query: 179 CVYEFLMNGLLRKGV----IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           C   F+++ L++  +    ++    +   + + G VP++ T N +LK +   G+     +
Sbjct: 269 CSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLA 328

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL----------- 283
            ++ +      P+V TF+ +  +  +  K+++A Q++  M EM + PD            
Sbjct: 329 AYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLC 388

Query: 284 ------------------------IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
                                   + Y++++DGL K  RL E  +LL     +G   DV 
Sbjct: 389 DCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVY 448

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            +S ++ +Y  +G++  AV  Y+ M++ G   N    S L++   + G   EA   F + 
Sbjct: 449 GYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKF 508

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
               L    + Y+  +D +CK+G + +   L + M   GL PD +  + LI+G      M
Sbjct: 509 KDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEM 568

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
            +A + F + ++  + P++  +N L  G C+     +   L   M    ++P+ +T+ + 
Sbjct: 569 QNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIA 628

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG---------------------- 532
           I G    G+LS A +LF  + ++G+    + YS+++ G                      
Sbjct: 629 IVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGN 688

Query: 533 -------------LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
                        L +  N+    ++ K+M  + V PD+  Y+ L+++  +  ++D A  
Sbjct: 689 LVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHL 748

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
            F  +  RGL  D+I Y  ++ GYC
Sbjct: 749 WFHDMVQRGLSVDVIVYTILMNGYC 773



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 176/371 (47%), Gaps = 36/371 (9%)

Query: 66  NIAQLIHVLLQSDMRD--VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFL 118
           N  Q+   +L++++    V  ++      + G     F L  D + D G +     Y   
Sbjct: 570 NAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLL-DRMADQGLEPNSLTYGIA 628

Query: 119 IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLCRAMR 174
           I  + R G + E+  +F  + + GI    D ++ + S +V     S      Y L   + 
Sbjct: 629 IVGFCRGGNLSEAEVLFNVVEEKGI----DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVA 684

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G  V  F    L+N L R G ++ A ++ + +++   VP++++ +K++   C NG + 
Sbjct: 685 RQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMD 744

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A   F  ++  G   +V+ ++ L+N +CK  +L++A QL+  M  + + PD+I Y++L+
Sbjct: 745 KAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLL 804

Query: 291 DGLFKA-------GRLKE---------GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           DG  K        G  KE          N+LL +  D  ++ DV  ++ ++D       +
Sbjct: 805 DGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYL 864

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A + +D ML  G  P+  +Y+ LI G C QG + +A  L  +++ + +EP  LT+S L
Sbjct: 865 VEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 924

Query: 395 IDGFCKSGKLR 405
                +S K++
Sbjct: 925 NQSSLRSRKIQ 935



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 12/167 (7%)

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN------IKPDVITHTVLIRGIA 499
           R+ ++P+++ +N L      LK   +T +  M++  YN      + PDV T  ++ R + 
Sbjct: 300 RLGVVPSVWTWNLL------LKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLF 353

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
               +  A+ ++ +M + G+ PD   YS+ + GL       +   + + + R  V  +  
Sbjct: 354 QAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAM 413

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            YN++++ L KE  LD A KL      +G  PD+  Y+ +I  YC +
Sbjct: 414 AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKM 460


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 208/432 (48%), Gaps = 23/432 (5%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NG  R G + +A  +   +      P+  T N +L  LC   Q  +A +L   +
Sbjct: 182 TYTTLINGYCRSGRLADALAL---IASMPVAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +     PN VTF+T I AFC+   L++A QL + M +    PD++IYS L++G  + GR+
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYV---GIGDVGRAVQTYDRMLNGGFLPNVISY 356
            +  ELL   L    K + + +++ +          DVG   Q    M+    LPN  ++
Sbjct: 299 DDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVG---QLIVEMVRKDCLPNEATF 352

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           S+L   LCQ G +  A  +  Q+      P  + Y++LI  F + G++ D   L ++M  
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM-- 410

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
               PD +  +  + GL       DA     Q +R         FN L+D  C+  R  +
Sbjct: 411 -PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNN 469

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            +++F  M  Y   PD++T++ LI G++ QG + SAI LF  M      PD+  Y+A++ 
Sbjct: 470 AIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLK 526

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL +         +   M R    P+   +N+L+N L ++  +D A+++F Q+   G  P
Sbjct: 527 GLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTP 586

Query: 592 DIITYNTIICGY 603
           DI TYN +I G+
Sbjct: 587 DIFTYNALINGF 598



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/501 (22%), Positives = 227/501 (45%), Gaps = 74/501 (14%)

Query: 31  QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKM 90
           Q+  A A++A +++ + P   + F             A  I    Q+ + D A  + D+M
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTF-------------ATQIRAFCQNGLLDRAVQLLDRM 273

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
             Q+G T +               YS L+  +   G++D+++E+       G+   P+ +
Sbjct: 274 P-QYGCTPDVV------------IYSTLVNGFSEQGRVDDAIELLN-----GMLCKPNTI 315

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
                              C     KG C+ +            E+   +  +++++  +
Sbjct: 316 -------------------CYNAALKGLCIAQRW----------EDVGQLIVEMVRKDCL 346

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN  T + +   LC NG +  A  + + +   G +P+ V ++TLI +F ++ +++ A +L
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
            N    M   PD+I ++  + GL +A R  +  EL++  L     L  + F+ ++D+   
Sbjct: 407 LN---SMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQ 463

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G V  A++ +++M   G  P++++YS LI GL +QG +  A  LF  +  +   P +  
Sbjct: 464 NGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDIFG 520

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSV 445
           Y++++ G C++ +  D   L  NM ++   P+ +  ++LIN     GL+  A+  F Q  
Sbjct: 521 YNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMP 580

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +    P++F +N L++G     R  D  +L   M   + KPD +++   ++G+       
Sbjct: 581 KYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWK 637

Query: 506 SAILLFFQMLKRGLTPDVITY 526
            A  +  +ML+    P+ +T+
Sbjct: 638 EAEEVVAEMLRMKCPPNEVTF 658



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 151/327 (46%), Gaps = 16/327 (4%)

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           ++  +ILI  L    RL +  E +L AL      D V  ++++  Y   G +  A +   
Sbjct: 112 VVACNILIKKLCAQRRLADA-ERVLDALKAAGAADPVSHNTLVAGYCRDGRLADA-ERLL 169

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
                    NV++Y+ LI G C+ GRL +A  L   + +    P   TY++++ G C + 
Sbjct: 170 AAAGLSGAANVVTYTTLINGYCRSGRLADALALIASMPV---APDTYTYNTVLMGLCGAR 226

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFN 457
           +  D  +L   M++    P+ V  +  I     NGL+  A++   +  +    P++ I++
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           TL++G     R  D ++L  L GM   KP+ I +   ++G+           L  +M+++
Sbjct: 287 TLVNGFSEQGRVDDAIEL--LNGML-CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRK 343

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
              P+  T+S +   L +   +   + + + M + G  PD  IYN L+    ++  +D A
Sbjct: 344 DCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDA 403

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
           LKL   +      PD+I++N  + G C
Sbjct: 404 LKLLNSMP---CSPDVISFNAALKGLC 427


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 217/460 (47%), Gaps = 64/460 (13%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G  ++ +I+   ++G +D ++E+F  M +               CL D            
Sbjct: 187 GLSFNLVIKALCKLGFVDRAIEVFRGMPEK-------------KCLPD------------ 221

Query: 172 AMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
              G  +C    LM+GL ++  I+ A  +  ++   G  P+ V  N ++  LC  G +  
Sbjct: 222 ---GYTYCT---LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSR 275

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
            + L D + L G  PN VT++TLI+  C + KL+KA  L   M+    +P+ + Y  LI+
Sbjct: 276 VTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLIN 335

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL K  R  +G  LL++  +RG +L+  ++S ++      G    A+  + +M   G  P
Sbjct: 336 GLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRP 395

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N++ YS +I GLC++G+  EA  +   ++     P++ TYSSL+ GF K+G   +   ++
Sbjct: 396 NIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVW 455

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             M       D   CS                        N F ++ L+DG C + R  +
Sbjct: 456 REM-------DETGCSR-----------------------NEFCYSVLIDGLCGVGRVKE 485

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML---KRGLTPDVITYSA 528
            + ++  M    IKPD + ++ +I+G+   GS+ +A+ L+ +ML   +    PDV+TY+ 
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           ++ GL   K++S  + +   M   G  PD+   N  LN L
Sbjct: 546 LLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTL 585



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 193/398 (48%), Gaps = 43/398 (10%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PN ++F+ +I A CK   +++A +++  M E   +PD   Y  L+DGL K  R+ E   L
Sbjct: 185 PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLL 244

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L      G     V+++ ++D     GD+ R  +  D M   G  PN ++Y+ LI GLC 
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCL 304

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC-------------------------- 399
           +G+L +A  L  +++  +  P+ +TY +LI+G                            
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHI 364

Query: 400 ---------KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSV 445
                    K GK  +  +L+  M ++G +P+ VV S +I+GL       +A       +
Sbjct: 365 YSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMI 424

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
               +PN++ +++LM G  +   + + ++++  M       +   ++VLI G+   G + 
Sbjct: 425 SSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM---ERNGVAPDIAIYN 562
            A++++ +ML  G+ PD + YS++I GL    ++   L ++  M   E     PD+  YN
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +LL+ L  + ++  A+ L   + DRG +PD+IT NT +
Sbjct: 545 ILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFL 582



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 152/353 (43%), Gaps = 63/353 (17%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI      GK+D++V +   M       +      L++ LV         +L  +M 
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISME 354

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G+     +Y  L++GL ++G  E A  + +++ ++G  PNIV  + ++  LC  G+  
Sbjct: 355 ERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPN 414

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  + + ++  G  PNV T+S+L+  F K    E+A Q++  M E     +   YS+LI
Sbjct: 415 EAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLI 474

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML---NG 347
           DGL   GR+KE   +    L  G+K D V +SS++    GIG +  A++ Y  ML     
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEP 534

Query: 348 GFLPNVISYSILIKGL-----------------------------------------CQQ 366
              P+V++Y+IL+ GL                                         C++
Sbjct: 535 KSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEE 594

Query: 367 GR---------------LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           GR               +  AC +   +L + L P   T++ ++   CK  K+
Sbjct: 595 GRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKI 647


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 218/460 (47%), Gaps = 26/460 (5%)

Query: 173  MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
            M  KGF      Y  L+N L +KG +E    +  ++ +RGF PN+   N ++  LC    
Sbjct: 1208 METKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRS 1267

Query: 229  IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
               A  +   +   G  P+++TF+TLI   C E  + KA       +  +L P+ + Y+ 
Sbjct: 1268 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 1327

Query: 289  LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            LI G    G L   ++LL+  + RG   DVV F +++   V  G V  A+   ++M    
Sbjct: 1328 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1387

Query: 349  FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              P+V  Y++LI GLC++  L  A  +  ++L + ++P    Y++LIDGF +S  L D  
Sbjct: 1388 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDAR 1447

Query: 409  SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
             +++ M  +G+ PD V C+ +I      G+M +A+       ++  IP+ F + T++ G 
Sbjct: 1448 KIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1507

Query: 464  CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
             +       ++    M     KP+V+T++ LI G    G    A  LF  M    L+P+V
Sbjct: 1508 AKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNV 1567

Query: 524  ITYSAIIHGLF-KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK---------ECN 573
            +TY+ +I  LF K K +  GL+ F+ M  N  +P+    + L+N L            CN
Sbjct: 1568 VTYTILIGSLFKKDKVLRAGLY-FETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCN 1626

Query: 574  L------DAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
                   DA L +F +L     +P    YN II   C  N
Sbjct: 1627 TSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHN 1666



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 204/439 (46%), Gaps = 40/439 (9%)

Query: 206  QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL------------------------- 240
            Q G +P +  CN++LK L    +  +A  L+D +L                         
Sbjct: 1105 QYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVE 1164

Query: 241  ----------LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
                        G  P+VV ++ LI+ +C+   + +   L   M     +P L+ Y  LI
Sbjct: 1165 EGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLI 1224

Query: 291  DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            + L K G L++   L L    RG   +V +++SV+DA        +A+    +M   G  
Sbjct: 1225 NWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCD 1284

Query: 351  PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            P++I+++ LI GLC +G + +A     + + R L P+ L+Y+ LI GFC  G+L     L
Sbjct: 1285 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDL 1344

Query: 411  YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
               M+ RG  PD V    LI+GL     + +AL    +     + P++ I+N L+ G C+
Sbjct: 1345 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1404

Query: 466  LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +       +   M   N++PD   +  LI G     +L  A  +F  M  +G+ PD+++
Sbjct: 1405 KRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVS 1464

Query: 526  YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
             +A+I G  +   +S  +     M + G  PD   Y  +++   K+ NL+ AL+    + 
Sbjct: 1465 CNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI 1524

Query: 586  DRGLEPDIITYNTIICGYC 604
             R  +P+++TY+++I GYC
Sbjct: 1525 KRKCKPNVVTYSSLINGYC 1543



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 189/403 (46%), Gaps = 6/403 (1%)

Query: 208  GFVPNIVTCNKILKRLCINGQIGNASSLFD-VLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P       ++      G +G A+ + + V    G  P V   + L+    ++ + + 
Sbjct: 1071 GAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDD 1130

Query: 267  AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
            A +LY+ M+  D   D     +L+ GL    R++EG +L+      G    VV ++ ++D
Sbjct: 1131 ARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLID 1190

Query: 327  AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
             Y   GD+GR +     M   GFLP +++Y  LI  L ++G L +   LF ++  R   P
Sbjct: 1191 GYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSP 1250

Query: 387  SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFF 441
            ++  Y+S+ID  CK         +   M   G  PD +  + LI GL  +     A  F 
Sbjct: 1251 NVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 1310

Query: 442  FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
             +++R  L PN   +  L+ G C          L + M      PDV+T   LI G+   
Sbjct: 1311 REAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVA 1370

Query: 502  GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
            G +S A+++  +M +R + PDV  Y+ +I GL K + +    ++ + M    V PD  +Y
Sbjct: 1371 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVY 1430

Query: 562  NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              L++  I+  NL  A K+F  +  +G+ PDI++ N +I GYC
Sbjct: 1431 ATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYC 1473



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/403 (21%), Positives = 182/403 (45%), Gaps = 29/403 (7%)

Query: 96   KTYNFFR-LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--R 152
            K  +F R   R  L      Y+ LI  +   G++  + ++   M  MG   +PD+V    
Sbjct: 1305 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM--MGRGHTPDVVTFGA 1362

Query: 153  LMSCLVDSNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
            L+  LV +  V +   +   M  +       +Y  L++GL +K ++  A ++  +++++ 
Sbjct: 1363 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKN 1422

Query: 209  FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
              P+      ++     +  +G+A  +F+ +   G  P++V+ + +I  +C+   + +A 
Sbjct: 1423 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAI 1482

Query: 269  QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
               + M ++  +PD   Y+ +I G  K G L      L   + R  K +VV +SS+++ Y
Sbjct: 1483 LCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGY 1542

Query: 329  VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
               GD   A   +  M      PNV++Y+ILI  L ++ +++ A   F  +L+    P+ 
Sbjct: 1543 CKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPND 1602

Query: 389  LTYSSLIDGF------------CKSGKLRDGFSL--------YDNMIKRGLKPDAVVCSL 428
            +T   L++G             C + ++    +L        +D    R    +A++ SL
Sbjct: 1603 VTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSL 1662

Query: 429  LINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
              + ++ +AL F  +  +   +PN   F +L+ G C + ++ +
Sbjct: 1663 CRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVN 1705



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 3/189 (1%)

Query: 423  AVVCSLLINGLMGDALRFFFQSVRMTL--IPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            A+V +    G++G A +   + VR     +P +   N L+      +R  D  KL+  M 
Sbjct: 1081 ALVAAYADAGMLGKATKMC-ERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEML 1139

Query: 481  MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              +   D  +  VL+RG+  +  +   + L       G  P V+ Y+ +I G  +  ++ 
Sbjct: 1140 GKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMG 1199

Query: 541  VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             GL +   ME  G  P +  Y  L+N L K+ +L+    LF ++  RG  P++  YN++I
Sbjct: 1200 RGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVI 1259

Query: 601  CGYCSLNSC 609
               C   S 
Sbjct: 1260 DALCKCRSA 1268


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 215/427 (50%), Gaps = 18/427 (4%)

Query: 180 VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           ++EF  ++  L++         +HRQ+   G   N+VT + ++      GQ   + S+F 
Sbjct: 12  IFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFA 71

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L  G   + +TF+TLI   C + ++ KA   ++ ++      + + Y  LI+GL K G
Sbjct: 72  NILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVG 131

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           + +   E L     + ++ DVV++++++D       V  A   Y  M+     P+V++Y+
Sbjct: 132 QTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYN 191

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI GLC   +L +A GL  ++++  + P++ T+S LID FCK GK+++  +++  M+K 
Sbjct: 192 TLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKE 251

Query: 418 GLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            +KP+ V  + L++G            V+        IFNT+      +K   + + LF 
Sbjct: 252 DVKPNIVTYNSLMDG------HHLVNVVKKA----KSIFNTM------IKMVDEAMNLFE 295

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I PD++ +  LI G+   G    A+    +M  RG  PD+ TY++++  L K  
Sbjct: 296 EMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNY 355

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           ++   + +   ++  G+ P +  YN+L+N L K   L  A K+F  L  +G   D+ TYN
Sbjct: 356 HVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYN 415

Query: 598 TIICGYC 604
            +I G+C
Sbjct: 416 AMIKGFC 422



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 188/380 (49%), Gaps = 19/380 (5%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P P++  F  ++ +  K         L+  M    L  +L+  SILI+   + G+     
Sbjct: 8   PTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSF 67

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +    L +G   D + F++++      G++ +A+  +D+++  GF  N +SY  LI GL
Sbjct: 68  SVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGL 127

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+ G+   A     ++  + ++P ++ Y+++IDG CK   + D F+LY  M+ + + P  
Sbjct: 128 CKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSV 187

Query: 424 V-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V     +C L I   + DA+    + +   + P ++ F+ L+D  C+  +  +   +F +
Sbjct: 188 VTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAV 247

Query: 479 MGMYNIKPDVITHTVLIRG------IASQGSL--------SSAILLFFQMLKRGLTPDVI 524
           M   ++KP+++T+  L+ G      +    S+          A+ LF +M  + + PD++
Sbjct: 248 MMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMV 307

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            Y+++I GL K       L     M   G  PDI  YN LL+ L K  ++D A++L  +L
Sbjct: 308 IYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKL 367

Query: 585 TDRGLEPDIITYNTIICGYC 604
            D+G++P + TYN +I G C
Sbjct: 368 KDQGIQPSVCTYNILINGLC 387



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 219/460 (47%), Gaps = 24/460 (5%)

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           +++  LV +N       L R M   G          L+N   + G    +F +   ++++
Sbjct: 17  KILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKK 76

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G+  + +T   ++K LC+ G+I  A    D ++  G K N V++ TLIN  CK  +   A
Sbjct: 77  GYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAA 136

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +    +    + PD+++Y+ +IDGL K   + +   L    + + +   VV +++++  
Sbjct: 137 LEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICG 196

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
              +  +  A+    +M+     P V ++SILI   C++G++ EA  +F  ++   ++P+
Sbjct: 197 LCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPN 256

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIK--------------RGLKPDAVVCSLLINGL 433
           ++TY+SL+DG      ++   S+++ MIK              + + PD V+ + LI+GL
Sbjct: 257 IVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGL 316

Query: 434 MGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
                   AL+F  +       P++F +N+L+D  C+       ++L   +    I+P V
Sbjct: 317 CKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSV 376

Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
            T+ +LI G+   G L  A  +F  +L +G   DV TY+A+I G  K       L M   
Sbjct: 377 CTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSK 436

Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           M+ +G +PD     +++  L  +   D A K F ++  RG
Sbjct: 437 MKDSGCSPDAKNCEIIIRSLFDKGENDKAGK-FREMIVRG 475



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 215/455 (47%), Gaps = 63/455 (13%)

Query: 42  LIKTNNPTPAI-QFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVI-----QFG 95
           L+   NPTP+I +F K   + V + + + ++ +  Q +   +AS++    ++     Q G
Sbjct: 2   LLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLG 61

Query: 96  KTYNFFRLFRDSLGD-FGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           +    F +F + L   +G D   ++ LI+     G+I +++     +   G  L+     
Sbjct: 62  QNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYG 121

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L++ L          +  R + GK       +Y  +++GL +  ++ +AF+++ +++ +
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
              P++VT N ++  LCI  Q+ +A  L   ++L    P V TFS LI+AFCKE K+++A
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEA 241

Query: 268 FQLYNLMMEMD------------------------------------------------- 278
             ++ +MM+ D                                                 
Sbjct: 242 KNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQ 301

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
           + PD++IY+ LIDGL K+GR     + +     RG   D+  ++S++DA      V +A+
Sbjct: 302 IYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAI 361

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
           +   ++ + G  P+V +Y+ILI GLC+ GRL +A  +F  +L++     + TY+++I GF
Sbjct: 362 ELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGF 421

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           CK G   +  ++   M   G  PDA  C ++I  L
Sbjct: 422 CKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSL 456



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 130/262 (49%), Gaps = 5/262 (1%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++  +  ++  L +         L  Q+    L  +L+T S LI+ + + G+    FS+
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + N++K+G   DA+  + LI GL     +  AL F  + V      N   + TL++G C+
Sbjct: 70  FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           + +    ++    +    ++PDV+ +  +I G+     ++ A  L+F+M+ + + P V+T
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ +I GL     +   + +   M    + P +  +++L++   KE  +  A  +F  + 
Sbjct: 190 YNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMM 249

Query: 586 DRGLEPDIITYNTIICGYCSLN 607
              ++P+I+TYN+++ G+  +N
Sbjct: 250 KEDVKPNIVTYNSLMDGHHLVN 271



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 137/268 (51%), Gaps = 18/268 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S LI+ + + GK+ E+  +FA M  M   + P++V    + L+D + +    K  ++  
Sbjct: 225 FSILIDAFCKEGKMKEAKNVFAVM--MKEDVKPNIVT--YNSLMDGHHLVNVVKKAKS-- 278

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                    + N +++  +++ A ++  ++  +   P++V  N ++  LC +G+   A  
Sbjct: 279 ---------IFNTMIK--MVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALK 327

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
               +   G  P++ T+++L++A CK   ++KA +L   + +  + P +  Y+ILI+GL 
Sbjct: 328 FIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLC 387

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K+GRLK+  ++    L +G   DV  +++++  +   G     +    +M + G  P+  
Sbjct: 388 KSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAK 447

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +  I+I+ L  +G   +A G F ++++R
Sbjct: 448 NCEIIIRSLFDKGENDKA-GKFREMIVR 474


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 210/406 (51%), Gaps = 10/406 (2%)

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           Q  F  N  TCN +L       ++ +A   F   +    +P+ V+++TL+N F K   ++
Sbjct: 95  QSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVK 154

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           KA  L+  M +  +   L  ++I++ GL   G++    E+    +      +++ ++ ++
Sbjct: 155 KALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVF-KDMSGIFSPNLISYTIMI 212

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           D       V +A+  + +M++    P+V++Y  LI GL +Q R+ EA  LF +   +   
Sbjct: 213 DGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCH 272

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG-LKPDAVVCSLLINGL----MGD-ALR 439
           P+++TY+++IDG CK G++ +  +LYD+M++   LKPD    S LINGL     G+ A  
Sbjct: 273 PTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYE 332

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI-KPDVITHTVLIRGI 498
            + + +     P++  +NTL+DG C+       +++F  MG+ N+  P+VIT+TVLI   
Sbjct: 333 LYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRF 392

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                L  A+ L  +M  R L PD +T++ +I  L K   I     +F+ + +    PD 
Sbjct: 393 CKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDS 451

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            ++N +L    K   +D A KL  ++ D G  P + TY  ++ G+C
Sbjct: 452 VLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFC 497



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 189/383 (49%), Gaps = 43/383 (11%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  LMNG  + G ++ A  +  ++   G +  + + N +L+ LC  G+I  A  +F  + 
Sbjct: 140 YNTLMNGFFKAGDVKKALALFGEMKDSG-IAVLRSHNIVLRGLCSGGKISMAWEVFKDMS 198

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +   PN+++++ +I+  CK  K++KA  L+  M++  + PD++ Y  LIDGL K  R+K
Sbjct: 199 GIF-SPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVK 257

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV-------------------------- 334
           E  +L   A  +G    VV +++++D     G +                          
Sbjct: 258 EAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSAL 317

Query: 335 ----------GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
                      +A + Y+ ML+ G  P+V++Y+ L+ GLC+ G   +A  +F ++ +  +
Sbjct: 318 INGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNV 377

Query: 385 -EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALR 439
            +P+++TY+ LID FCK  +L D   L   M  R L PDAV  + +I  L      D   
Sbjct: 378 CDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAH 437

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
             F+S+  T  P+  +FNT++ G C++ R  D  KL   M      P + T+T L+ G  
Sbjct: 438 ELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFC 497

Query: 500 SQGSLSSAILLFFQMLKRGLTPD 522
             G  S A++++ +M++ G  P+
Sbjct: 498 RTGRYSDALIMYHEMIEMGFPPE 520



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 208/410 (50%), Gaps = 22/410 (5%)

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP----NVVTFSTLINAFCKEAKL 264
            VP++V   K++ R      I + ++ ++V    G +     N  T + L++ + K  ++
Sbjct: 67  LVPDLV--GKVIHR------IPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRV 118

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E A   +   M+    PD + Y+ L++G FKAG +K+   L     D G+ + +   + V
Sbjct: 119 EDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIV 177

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +      G +  A + +  M +G F PN+ISY+I+I GLC+  ++ +A  LF Q++ + +
Sbjct: 178 LRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAI 236

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
            P ++TY +LIDG  K  ++++ + L++    +G  P  V  + +I+GL     + +AL 
Sbjct: 237 YPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALT 296

Query: 440 FFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
            +   VR   L P++F ++ L++G     R     +L+  M      PDV+T+  L+ G+
Sbjct: 297 LYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGL 356

Query: 499 ASQGSLSSAILLFFQM-LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
              G    A+ +F +M +     P+VITY+ +I    K   +   + + K ME   + PD
Sbjct: 357 CKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPD 416

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
              +  ++  L KE  +D A +LF  +  +  +PD + +NT++ GYC + 
Sbjct: 417 AVTFTTVIQKLCKESRIDEAHELFESIG-KTCKPDSVLFNTMLAGYCKIT 465



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 210/454 (46%), Gaps = 78/454 (17%)

Query: 47  NPTPAIQFFKW-------THNCVSSPNI---------AQLIHVLLQSDMRDVASHVFDKM 90
           +P  A + F+W       THN  +  N+          +  H+  QS M++V    F+  
Sbjct: 81  DPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNV----FEPD 136

Query: 91  VIQFGKTYN-FFRL--FRDSLGDFGC----------DYSFLIENYVRIGKIDESVEIFAY 137
            + +    N FF+    + +L  FG            ++ ++      GKI  + E+F  
Sbjct: 137 EVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKD 196

Query: 138 MSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRK 191
           MS  GI+ SP+L+    ++  L  S  V +   L + M  K        Y  L++GL ++
Sbjct: 197 MS--GIF-SPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQ 253

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-KPNVVT 250
             ++ A+ +  +   +G  P +VT N ++  LC  G+I NA +L+D ++     KP++ T
Sbjct: 254 RRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFT 313

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT-A 309
           +S LIN      + EKA++LY  M++    PD++ Y+ L+DGL K+G   +  E+     
Sbjct: 314 YSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMG 373

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           +      +V+ ++ ++D +  +  +G AV+    M     LP+ ++++ +I+ LC++ R+
Sbjct: 374 VGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRI 433

Query: 370 VEACGLF-------------------GQVLIRRLE---------------PSLLTYSSLI 395
            EA  LF                   G   I R++               P+L TY++L+
Sbjct: 434 DEAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALV 493

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            GFC++G+  D   +Y  MI+ G  P+  +  L+
Sbjct: 494 TGFCRTGRYSDALIMYHEMIEMGFPPERHLAELV 527


>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 215/436 (49%), Gaps = 9/436 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           ++  +M  L  +G ++ A  +  ++++ GF+P ++  N +L  LC  G I  A  L   +
Sbjct: 121 IHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVREM 180

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
             +GP PN V+++TLI   C    ++KA  L++ + +  + P+ +  +I++  L + G +
Sbjct: 181 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGVI 240

Query: 300 KEGN----ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
              N    E +L +      LD+V  + +MD+    G+V +A++ +  M       + + 
Sbjct: 241 GNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVV 300

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y+++I+GLC  G +V A G    ++ R + P + TY++LI   CK+GK      L+  M 
Sbjct: 301 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQ 360

Query: 416 KRGLKPDAVVCSLLINGL--MGDALRF--FFQS-VRMTLIPNLFIFNTLMDGCCRLKRAT 470
             G+ PD +   ++I GL   GD  R   F QS ++ +L+P + ++N ++DG  R    +
Sbjct: 361 NVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTS 420

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             + +  LM  Y +KP+V T+  LI G    G L  A  +  +M    + PD  TY+ ++
Sbjct: 421 CALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLV 480

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
                  ++ +   ++  M + G  PDI  Y  L+  L  +  L  A  L  ++   G+ 
Sbjct: 481 GAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGIT 540

Query: 591 PDIITYNTIICGYCSL 606
            D + +  ++  Y  L
Sbjct: 541 MDHVPFLILVKKYTRL 556



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 165/338 (48%), Gaps = 30/338 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ-------------------RLMS 155
           Y+ LI+    +  +D+++ +F+ ++  GI   P+ V                    +L+ 
Sbjct: 192 YNTLIKGLCSVNNVDKALYLFSTLNKYGI--KPNRVTCNIIVHALCQKGVIGNNNTKLLE 249

Query: 156 CLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
            ++DS+ V     +              LM+   + G +  A  + +++ Q+    + V 
Sbjct: 250 EILDSSQVNAPLDIVTCT---------ILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVV 300

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N I++ LC +G +  A      ++  G  P+V T++TLI+A CK  K + A  L+  M 
Sbjct: 301 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQ 360

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
            + + PD I Y ++I GL   G +   NE L + L R L  +V++++ V+D Y   GD  
Sbjct: 361 NVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTS 420

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A+   + ML+ G  PNV + + LI G  + GRL++A  +  ++   ++ P   TY+ L+
Sbjct: 421 CALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLV 480

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
              C  G LR  F LYD M+KRG +PD +  + L+ GL
Sbjct: 481 GAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGL 518



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 9/229 (3%)

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
           + SL  +SS++   C  GK+     L + M++ G  P  ++ + L+NGL     +  A  
Sbjct: 116 DDSLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADG 175

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              +   M   PN   +NTL+ G C +      + LF  +  Y IKP+ +T  +++  + 
Sbjct: 176 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALC 235

Query: 500 SQGSL-SSAILLFFQMLKRGL--TP-DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
            +G + ++   L  ++L       P D++T + ++   FK  N+   L ++K M +  V 
Sbjct: 236 QKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVP 295

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            D  +YNV++  L    N+ AA      +  RG+ PD+ TYNT+I   C
Sbjct: 296 TDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALC 344



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 141/301 (46%), Gaps = 6/301 (1%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQYYKLC---- 170
           + L+++  + G + +++E++  MS   +     +   ++  L  S N V  Y  +C    
Sbjct: 267 TILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVK 326

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           R +    F  Y  L++ L + G  + A  +H  +   G  P+ ++   I++ LCI G + 
Sbjct: 327 RGVNPDVF-TYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVD 385

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+     +L     P V+ ++ +I+ + +      A  + NLM+   + P++   + LI
Sbjct: 386 RANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALI 445

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K GRL +   +        +  D   ++ ++ A   +G +  A Q YD ML  G  
Sbjct: 446 HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQ 505

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++I+Y+ L++GLC +GRL EA  L  ++ +  +    + +  L+  + +  +  + + +
Sbjct: 506 PDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDEAYLV 565

Query: 411 Y 411
           Y
Sbjct: 566 Y 566



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/338 (20%), Positives = 141/338 (41%), Gaps = 50/338 (14%)

Query: 60  NCVSSPNIAQLIHVLLQSDMRDVA--SHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD--- 114
           +C  + N+ Q + V  +   ++V   S V++ ++     + N    +      F CD   
Sbjct: 272 SCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAY-----GFMCDMVK 326

Query: 115 ---------YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ 165
                    Y+ LI    + GK D + ++   M ++G+  +PD +               
Sbjct: 327 RGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGV--APDQIS-------------- 370

Query: 166 YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
                          Y+ ++ GL  +G ++ A    + +++R  +P ++  N ++     
Sbjct: 371 ---------------YKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGR 415

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            G    A S+ +++L  G KPNV T + LI+ + K  +L  A+ + N M    + PD   
Sbjct: 416 YGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT 475

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y++L+      G L+   +L    L RG + D++ ++ ++      G +  A     RM 
Sbjct: 476 YNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQ 535

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
             G   + + + IL+K   +  R  EA  ++ + L+ R
Sbjct: 536 VSGITMDHVPFLILVKKYTRLQRPDEAYLVYKKWLVTR 573



 Score = 46.2 bits (108), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 47/83 (56%)

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           +S+I+  L     +   L + + M R+G  P + ++N LLN L K   ++ A  L  ++ 
Sbjct: 122 HSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVREMR 181

Query: 586 DRGLEPDIITYNTIICGYCSLNS 608
           + G  P+ ++YNT+I G CS+N+
Sbjct: 182 EMGPSPNCVSYNTLIKGLCSVNN 204


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 270/578 (46%), Gaps = 27/578 (4%)

Query: 46  NNPTPAIQFFKWTHNCVSSPNIAQ----LIHVLLQSDMRDVASHVFDKMVIQFG----KT 97
           N+P  A++F  W     S  +  +    +IHVL+ S   D A  +   ++   G    + 
Sbjct: 19  NSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDALFIMGNLMNVNGISPLEV 78

Query: 98  YNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
            +      D        +  L+    +IG  + + E+   +   G +++       +S L
Sbjct: 79  LDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHL 138

Query: 158 VDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
           +  N V +++K+ + M   G+      +  ++  L ++G +  A  +  + ++ G  PN+
Sbjct: 139 LKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNV 198

Query: 214 VTCNKILKRLCINGQIGNASSL---FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           VT N I+      G +  A  L    +V+     KP+ VT+++ +N FCK   L  A + 
Sbjct: 199 VTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEF 258

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M+  ++ P++  Y+ L+DG  + G L+    L    +++GL  + V+++S++     
Sbjct: 259 KKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSM 318

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            GD+  A      M++    P+  +YSI+I+GLC+ G L EA      +L   L     +
Sbjct: 319 EGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFS 378

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSV 445
           ++ +I+  C+S  L     L  NM  RGL PD V    LI+     G + +A++ + + +
Sbjct: 379 HNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMI 438

Query: 446 RMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +    PNL I+N++++G  +      A   +     MG++    DV+T+  LI G  + G
Sbjct: 439 KTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF----DVVTYNTLIHGYCNCG 494

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A  LF +M   G+    +TY+ +I+ L K  ++     + K+M   G+ PD   Y 
Sbjct: 495 KIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYT 554

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +L+    K+C+ +  ++L   +  +G+ PD  TY T++
Sbjct: 555 ILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMV 592



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 229/470 (48%), Gaps = 13/470 (2%)

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMH 201
           SP +   L+       +    Y++   ++  GF V    +   ++ LL+   +   + M+
Sbjct: 92  SPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMY 151

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           ++++  G++ N+ T N I+  L   G++  A S+    L  G  PNVVTF+ +I+   K 
Sbjct: 152 KEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKM 211

Query: 262 AKLEKAFQLYNLMMEMD---LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
             ++ A +L   M  M    + PD + Y+  ++G  K G L    E     L + ++ +V
Sbjct: 212 GAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNV 271

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
             +++++D Y  +G +  A +  D ++  G LPN + Y+ +I  L  +G +  A  L   
Sbjct: 272 RTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSD 331

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----- 433
           ++ +R+ P   TYS +I+G C++G L + F     +++  L  DA   +++IN L     
Sbjct: 332 MIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNN 391

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           +  A +         L+P++  F TL+D  C+  +  + ++++  M     KP+++ +  
Sbjct: 392 LAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNS 451

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           +I G A +GS   AILL   + + GL  DV+TY+ +IHG      I     +F  M  +G
Sbjct: 452 VINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSG 510

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           +      YN L+N L K  ++  A +L   +  RGL PD +TY  +I  +
Sbjct: 511 ILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSF 560



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 206/397 (51%), Gaps = 14/397 (3%)

Query: 220 LKRLCINGQIGNASSLFDV---LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           L R C   QIG     ++V   L L G    V  ++  ++   K   + + +++Y  M+ 
Sbjct: 99  LVRTCT--QIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVS 156

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
              + ++  ++++I  L K GRL E   ++  +L  G+  +VV F+ ++D  + +G +  
Sbjct: 157 YGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDL 216

Query: 337 AVQTYDRM--LNG-GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           A++   +M  ++G    P+ ++Y+  + G C+ G L  A     ++L + +EP++ TY++
Sbjct: 217 ALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYAT 276

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           L+DG+ + G L + F L D ++++GL P++V+ + +I+ L     M  A       +   
Sbjct: 277 LVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKR 336

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + P+ F ++ +++G CR     +  K   ++   ++  D  +H V+I  +    +L+ A 
Sbjct: 337 IYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAK 396

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L   M  RGL PDV+T+  +I    K   +   + +++ M + G  P++ IYN ++N  
Sbjct: 397 QLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGF 456

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            KE + D A+ L   L   GL  D++TYNT+I GYC+
Sbjct: 457 AKEGSFDPAILLIDTLRRMGL-FDVVTYNTLIHGYCN 492



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 215/456 (47%), Gaps = 21/456 (4%)

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           Y +C++       V++ L+    + G  E A+ +  ++   GF   +   N  L  L   
Sbjct: 86  YDICKSSPA----VFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKL 141

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
             +     ++  ++  G   NV TF+ +I A  KE +L +A  +    ++  + P+++ +
Sbjct: 142 NDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTF 201

Query: 287 SILIDGLFKAGRLKEGNELLLTALDR-------GLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +++IDG  K G +    +L L  + +        +K D V ++S ++ +  IG++  A +
Sbjct: 202 NMIIDGAIKMGAM----DLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEE 257

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
               ML     PNV +Y+ L+ G  + G L  A  L  +++ + L P+ + Y+S+I    
Sbjct: 258 FKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLS 317

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLF 454
             G +     L  +MI + + PD    S++I     NG + +A +F    + M+L+ + F
Sbjct: 318 MEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAF 377

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
             N +++  CR        +L   M +  + PDV+T   LI      G + +AI ++ +M
Sbjct: 378 SHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKM 437

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           +K G  P+++ Y+++I+G  K  +    + +   + R G+  D+  YN L++       +
Sbjct: 438 IKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKI 496

Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
           D A  LF ++ + G+    +TYNT+I   C     L
Sbjct: 497 DQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVL 532



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 62/113 (54%), Gaps = 3/113 (2%)

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           ++ +M+  G   +V T++ II+ L K   +   + +     + G+ P++  +N++++  I
Sbjct: 150 MYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAI 209

Query: 570 KECNLDAALKLFGQL---TDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
           K   +D ALKL  ++   +   ++PD +TYN+ + G+C + +  +   FK ++
Sbjct: 210 KMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEM 262


>gi|357140804|ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Brachypodium distachyon]
          Length = 926

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 246/509 (48%), Gaps = 28/509 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+  Y +  +  E+ E+   M   G+YL   L   L+  L     +     +   MR
Sbjct: 151 YKSLVFTYCKARRSLEADEMCCLMVKNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMR 210

Query: 175 ---GKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G     Y +  ++ GL   G +++ + +++++  RG  P  VT N ++   C N  +
Sbjct: 211 VNEGAQLDAYAYTTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWV 270

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           G A  L++V++  G  P++  ++ L+ + CKE KL +A QL+  M+E  + PD +++ I 
Sbjct: 271 GAAMELYNVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPDHVLF-IS 329

Query: 290 IDGLFKAGRLKEGNELLLT--ALDRGLKLD----VVVFSSVMDAYVGIGDVGRAVQTYDR 343
           I   F      +G E++    AL    KLD    ++  SS+      +     A +  D 
Sbjct: 330 IARFFP-----KGWEVVFVRKALKAVAKLDCSGELLELSSLASGCSNMSLQQEAERLLDE 384

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M+    LP     +++I  +C +GRL  +  L  +++    EPS+LTY+ +I   C+  +
Sbjct: 385 MMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKR 444

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNT 458
           + D  +L + M  RG++PD    S+++     +GD   AL  F +  +  L P++ ++++
Sbjct: 445 MDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDS 504

Query: 459 LMDGCCRL---KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           ++   CRL   K A  T++  +  G+    PD + +T L+ G ++     +A  +F +ML
Sbjct: 505 IIACLCRLGHFKEAEFTLRQMIEAGLV---PDEVIYTTLLNGYSTMRHTKAACRVFDEML 561

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           +RGL P    Y A+I+GL K   I   LH  + M   G A    IY +L+N   ++    
Sbjct: 562 ERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYTMLINQFFRKGEEW 621

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
             L L   +    +EPD+ITY  ++ G C
Sbjct: 622 LGLDLVDLMMKNHVEPDLITYGALVTGIC 650



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 212/460 (46%), Gaps = 50/460 (10%)

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
           +G ++ ++++  +++  G+ P+++T N ++K LC   ++ +A +L +++   G +P++ T
Sbjct: 407 EGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMST 466

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
            S ++ A+CK   +E A  L++ M +  L P + +Y  +I  L + G  KE    L   +
Sbjct: 467 NSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMI 526

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
           + GL  D V+++++++ Y  +     A + +D ML  G  P   +Y  LI GL +  ++ 
Sbjct: 527 EAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIR 586

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           +A     ++L        + Y+ LI+ F + G+   G  L D M+K  ++PD +    L+
Sbjct: 587 KALHYLERMLEEGFATQTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALV 646

Query: 431 NGLMG---------------DALRFFF----------------QSVRMT----------- 448
            G+                 D  R+                  +  RM+           
Sbjct: 647 TGICRNIDRRDMRPSLAAKLDEARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNI 706

Query: 449 --------LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
                   ++P+L I+N +++G CR ++  D   L  LM    + P+ +T+T+L+     
Sbjct: 707 IQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIR 766

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G  + AI LF  +   G   D + Y+  I GL   +     L  F +M++ G  P  A 
Sbjct: 767 LGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAA 826

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           Y+ ++  L+ E + D AL +F  +   G  P    Y++++
Sbjct: 827 YDKIMEQLLAENSTDLALNIFDDMFCHGYIPRYSNYSSLL 866



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 208/432 (48%), Gaps = 6/432 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           + FL++GL  KG ++ A  +   ++  G  P +     ++   C   +   A  +  +++
Sbjct: 116 FPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKARRSLEADEMCCLMV 175

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP-DLIIYSILIDGLFKAGRL 299
             G   + +  + L+   C+E +LE A  ++N M   +    D   Y+ +I GLF+ G +
Sbjct: 176 KNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYV 235

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
             G EL     DRG++   V ++ +M  Y     VG A++ Y+ M+ GG  P++  Y++L
Sbjct: 236 DHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTML 295

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           +  LC++G+LVEA  LF ++L R + P  + + S+   F K  ++         + K   
Sbjct: 296 MTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDC 355

Query: 420 KPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             + +  S L +G     L  +A R   + +R  L+P   I N ++   C   R   +  
Sbjct: 356 SGELLELSSLASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYY 415

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   +  Y  +P V+T+ ++I+ +  Q  +  A  L   M  RG+ PD+ T S ++    
Sbjct: 416 LLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYC 475

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  +I   L +F  M ++G+ P IA+Y+ ++  L +  +   A     Q+ + GL PD +
Sbjct: 476 KIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEV 535

Query: 595 TYNTIICGYCSL 606
            Y T++ GY ++
Sbjct: 536 IYTTLLNGYSTM 547



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/513 (22%), Positives = 230/513 (44%), Gaps = 22/513 (4%)

Query: 110 DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           D  C Y+ L+ +  + GK+ E+ ++F  M + G++    L   +         V    K 
Sbjct: 288 DLRC-YTMLMTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFISIARFFPKGWEVVFVRKA 346

Query: 170 CRAMRGKGFCVYEFLMNGLLRKG-----VIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
            +A+  K  C  E L    L  G     + + A  +  ++++   +P     N ++  +C
Sbjct: 347 LKAV-AKLDCSGELLELSSLASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMC 405

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G++  +  L D L+  G +P+V+T++ +I   C++ +++ A  L NLM    + PD+ 
Sbjct: 406 SEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMS 465

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
             SI++    K G ++    L       GL+  + V+ S++     +G    A  T  +M
Sbjct: 466 TNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQM 525

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +  G +P+ + Y+ L+ G         AC +F ++L R L+P    Y +LI+G  K  K+
Sbjct: 526 IEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKI 585

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQS-----VRMTLIPNLFIFNTL 459
           R      + M++ G     V+ ++LIN        +         ++  + P+L  +  L
Sbjct: 586 RKALHYLERMLEEGFATQTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGAL 645

Query: 460 MDGCCR----------LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
           + G CR          L    D  +  +   +  I           + ++S+  +  A  
Sbjct: 646 VTGICRNIDRRDMRPSLAAKLDEARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQN 705

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           +   +++ G+ PD+  Y+ +++GL + + +    ++  LME++GV P+   Y +L+N  I
Sbjct: 706 IIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDI 765

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +  + + A++LF  L   G   D + YNT I G
Sbjct: 766 RLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKG 798



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 218/469 (46%), Gaps = 51/469 (10%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP-NVVT 250
           G I +A      +I+  +VP+  +   +L+ +C          LF VL    P P  V  
Sbjct: 57  GNIASALTCFDHLIESRYVPSPASSAALLRAMCAASMYSEVVDLF-VLWEGAPSPLPVSK 115

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           F  LI+  C +  ++KA  L+++M+ + L P + +Y  L+    KA R  E +E+    +
Sbjct: 116 FPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKARRSLEADEMCCLMV 175

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM-LNGGFLPNVISYSILIKGLCQQGRL 369
             G+ LD ++ ++++      G +  A+  ++RM +N G   +  +Y+ +I GL + G +
Sbjct: 176 KNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYV 235

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AV 424
                L+ ++  R +EP+ +TY+ ++  +CK+  +     LY+ M++ G+ PD      +
Sbjct: 236 DHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTML 295

Query: 425 VCSLLINGLMGDALRFFFQSVRMTLIPNLFIF---------------------------- 456
           + SL   G + +A + F + +   + P+  +F                            
Sbjct: 296 MTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDC 355

Query: 457 -------NTLMDGCCRLKRATDTVKLFMLMGMYNIKP-DVITHTVLIRGIASQGSLSSAI 508
                  ++L  GC  +    +  +L   M   N+ P D I + ++I  + S+G L  + 
Sbjct: 356 SGELLELSSLASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMII-AMCSEGRLDVSY 414

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  +++  G  P V+TY+ +I  L + K +     +  LM+  GV PD++  ++++   
Sbjct: 415 YLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAY 474

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
            K  ++++AL LF ++   GLEP I  Y++II   C L      G+FK 
Sbjct: 475 CKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRL------GHFKE 517



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 135/294 (45%), Gaps = 16/294 (5%)

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D  +  +++  +  +G++  A+  +D ++   ++P+  S + L++ +C      E   LF
Sbjct: 42  DPALSDALVACHSHLGNIASALTCFDHLIESRYVPSPASSAALLRAMCAASMYSEVVDLF 101

Query: 377 GQVLIRRLEPSLLTYSS---LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI--- 430
              ++    PS L  S    LI G C  G +     L+D M+  GL P   V   L+   
Sbjct: 102 ---VLWEGAPSPLPVSKFPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTY 158

Query: 431 ----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM-YNIK 485
                 L  D +      V+  +  +  +   L+ G C+  R    + +F  M +    +
Sbjct: 159 CKARRSLEADEMCCLM--VKNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQ 216

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
            D   +T +I G+   G +     L+ +M  RG+ P  +TY+ ++    K K +   + +
Sbjct: 217 LDAYAYTTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMEL 276

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           + +M R GV+PD+  Y +L+  L KE  L  A +LF ++ +RG+ PD + + +I
Sbjct: 277 YNVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFISI 330



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 157/375 (41%), Gaps = 57/375 (15%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  + +D L      Y  +I    R+G   E+      M + G  L PD V  + + L++
Sbjct: 487 FDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAG--LVPDEV--IYTTLLN 542

Query: 160 SNSVGQYYKL-CRAM-----RG--KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVP 211
             S  ++ K  CR       RG   G   Y  L+NGL++   I  A H   ++++ GF  
Sbjct: 543 GYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFAT 602

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE---------- 261
             V    ++ +    G+      L D+++    +P+++T+  L+   C+           
Sbjct: 603 QTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGICRNIDRRDMRPSL 662

Query: 262 -AKLEKA-FQLYNLM---------------------------------MEMDLVPDLIIY 286
            AKL++A + L+ L+                                 +E  ++PDL IY
Sbjct: 663 AAKLDEARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQDLVESGMMPDLHIY 722

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + +++GL +A ++ +   LL      G+  + V ++ +M+  + +GD  RA+Q ++ + +
Sbjct: 723 NGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNSLNS 782

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G + + + Y+  IKGL    R  EA   F  +  R   PS   Y  +++          
Sbjct: 783 DGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQLLAENSTDL 842

Query: 407 GFSLYDNMIKRGLKP 421
             +++D+M   G  P
Sbjct: 843 ALNIFDDMFCHGYIP 857



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 2/222 (0%)

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           I+ A ++ + +++ G +P++   N +L  LC   ++ +A +L  ++   G  PN VT++ 
Sbjct: 700 IDLAQNIIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTI 759

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           L+N   +     +A QL+N +     V D ++Y+  I GL  A R KE     L    RG
Sbjct: 760 LMNNDIRLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRG 819

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
                  +  +M+  +       A+  +D M   G++P   +YS L+  L +  +  E  
Sbjct: 820 FVPSKAAYDKIMEQLLAENSTDLALNIFDDMFCHGYIPRYSNYSSLLLVLAKDNQWREVD 879

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFC-KSGKLRDGFSLYDNM 414
            +F  +L +       T   L++  C K G+L   F L  NM
Sbjct: 880 RVFMMMLEKGRSLDTET-KKLLEELCYKQGELDLAFELEGNM 920



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 6/196 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC---LVDSNSVGQYYKLCR 171
           Y+ ++    R  K+D++  + + M   G+  +      LM+    L DSN   Q +    
Sbjct: 722 YNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNSLN 781

Query: 172 AMRGKGF--CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           +  G  F   VY   + GL      + A      + +RGFVP+    +KI+++L      
Sbjct: 782 S-DGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQLLAENST 840

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A ++FD +   G  P    +S+L+    K+ +  +  +++ +M+E     D     +L
Sbjct: 841 DLALNIFDDMFCHGYIPRYSNYSSLLLVLAKDNQWREVDRVFMMMLEKGRSLDTETKKLL 900

Query: 290 IDGLFKAGRLKEGNEL 305
            +  +K G L    EL
Sbjct: 901 EELCYKQGELDLAFEL 916


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 232/498 (46%), Gaps = 13/498 (2%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           ++  +  IGK  E+V +   M + G+ L+   +  +     +   VG    +   MR +G
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226

Query: 178 FC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
            C     Y+ +     R G I +     + +++RGFV +  TC  ++   C  G      
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             FD  + +G KPN++ F++LIN  CK   +++AF++   M++    P++  ++ LIDGL
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346

Query: 294 FKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
            K G  ++   L L  +     K +V  ++S++  Y     + RA     RM   G +PN
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPN 406

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
             +Y+ LI G  + G   +A  L   +       ++ TY++ ID  CK G+  +   L  
Sbjct: 407 TKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLK 466

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
              + GL+ D V  ++LI+ L       +AL FF +  +  + P++  +NTL+    R +
Sbjct: 467 KGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQR 526

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  ++ KLF       + P   T+T +I G     ++S A+  F +M   G TPD +TY 
Sbjct: 527 RMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYG 586

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           A+I GL K   +     +++ M   G++P       L     K+ +   A+ +  +L D+
Sbjct: 587 ALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERL-DK 645

Query: 588 GLEPDIITYNTIICGYCS 605
            L   I T NT+I   CS
Sbjct: 646 KLW--IRTVNTLIRKLCS 661



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 181/399 (45%), Gaps = 44/399 (11%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NGL ++G I+ AF M  +++++G+ PN+ T   ++  LC  G    A  LF  L+   
Sbjct: 307 LINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD 366

Query: 244 P-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG---------- 292
             KPNV T++++I+ +CKE KL +A  L + M E  LVP+   Y+ LIDG          
Sbjct: 367 DYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKA 426

Query: 293 -------------------------LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
                                    L K GR  E  +LL      GL+ D V ++ ++  
Sbjct: 427 YELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISE 486

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                D   A+  + +M   G  P++ +Y+ LI    +Q R+ E+  LF + +   L P+
Sbjct: 487 LCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPT 546

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
             TY+S+I G+C+   +      ++ M   G  PD++    LI+GL     + +A + + 
Sbjct: 547 KETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYE 606

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             V   L P      TL    C   +  D+    +++   + K  + T   LIR + S+ 
Sbjct: 607 AMVDKGLSPCEVTRLTLAYEYC---KQDDSATAMVILERLDKKLWIRTVNTLIRKLCSER 663

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
            +  A+L F ++L +    D +T +A     ++    ++
Sbjct: 664 KVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNKYAL 702



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 6/291 (2%)

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           V   ++  +  IG    AV     M N G +  V + + +     + G +  A  +F ++
Sbjct: 163 VMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEM 222

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLM 434
            +R + P  ++Y  +   +C+ G++ D      +M++RG   D   C+L+I+     G  
Sbjct: 223 RVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFA 282

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
                +F + V + L PNL  F +L++G C+        ++   M     KP+V THT L
Sbjct: 283 SRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTAL 342

Query: 495 IRGIASQGSLSSAILLFFQMLKR-GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           I G+  +G    A  LF ++++     P+V TY+++IHG  K   ++    +   M+  G
Sbjct: 343 IDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQG 402

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + P+   Y  L++   K  N + A +L   +   G   +I TYN  I   C
Sbjct: 403 LVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLC 453



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 37/203 (18%), Positives = 88/203 (43%), Gaps = 7/203 (3%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F ++F+  +      Y+ LI  + R  +++ES ++FA    +G+  + +    ++     
Sbjct: 500 FSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCR 559

Query: 160 SNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
             +V    K    M   G       Y  L++GL ++  ++ A  ++  ++ +G  P  VT
Sbjct: 560 DRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVT 619

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
              +    C   +  ++++   +L  +  K  + T +TLI   C E K+  A   ++ ++
Sbjct: 620 RLTLAYEYC---KQDDSATAMVILERLDKKLWIRTVNTLIRKLCSERKVGMAVLFFHKLL 676

Query: 276 EMDLVPDLIIYSILIDGLFKAGR 298
           + D   D +  +      +++ +
Sbjct: 677 DKDQNVDRVTLTAFTTACYESNK 699



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 1/115 (0%)

Query: 495 IRGIASQ-GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           + G+A + G +  A  +F +M  RG+ PD ++Y  +     +   IS      K M R G
Sbjct: 202 VTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRG 261

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
              D A   ++++   ++         F +  + GL+P++I + ++I G C   S
Sbjct: 262 FVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGS 316


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 213/421 (50%), Gaps = 7/421 (1%)

Query: 192 GVIENAFHMHRQV--IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           G ++ A  M R++   +    P+  + N ++  L  +G+  +A  +FD ++  G  PN +
Sbjct: 172 GDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQI 231

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           T++T+I+   K   LE  F+L + M++    P+++ Y++L+ GL +AGR+ E   L+   
Sbjct: 232 TYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEM 291

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
               +  D   +S + D     GD    +  +   L  G +    + SIL+ GLC+ G++
Sbjct: 292 TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKV 351

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  +   ++   L P+   Y++LI+G+C+   L+  FS+++ M  R ++PD +  + L
Sbjct: 352 AKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNAL 411

Query: 430 INGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           INGL     + +A     +  +  + P++  FNTL+D   R  +      +   M    I
Sbjct: 412 INGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           K +VI+   +++     G +  A+ +   M+ + + P+   Y++II    +         
Sbjct: 472 KSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFL 531

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + + M+ +GV+  I  YN+LL  L K   +D A +L   LT++GL PD+++YNTII   C
Sbjct: 532 LVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACC 591

Query: 605 S 605
           +
Sbjct: 592 N 592



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 139/563 (24%), Positives = 245/563 (43%), Gaps = 70/563 (12%)

Query: 32  FNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMV 91
            ++A A+L  + ++    P   F   ++N V    IA L      SD   V   + D+ V
Sbjct: 174 LDEALAMLRRMGRSEGAPPPDAF---SYNVV----IAGLWRSGKGSDALKVFDEMVDRGV 226

Query: 92  IQFGKTYNF--------------FRLFRDSLGDFG-----CDYSFLIENYVRIGKIDESV 132
                TYN               FRL RD +   G       Y+ L+    R G++DE+ 
Sbjct: 227 APNQITYNTMIDGHVKGGDLEAGFRL-RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDET- 284

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKG 192
              A M +M  Y                           +M   GF  Y  L +GL R G
Sbjct: 285 --RALMDEMTSY---------------------------SMLPDGF-TYSILFDGLTRTG 314

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
                  +  + +++G +    TC+ +L  LC +G++  A  + ++L+  G  P    ++
Sbjct: 315 DSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYN 374

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           TLIN +C+   L+ AF ++  M    + PD I Y+ LI+GL K   + E  +L++     
Sbjct: 375 TLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKS 434

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G+   V  F++++DAY   G + +       M + G   NVIS+  ++K  C+ G++ EA
Sbjct: 435 GVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEA 494

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             +   ++ + + P+   Y+S+ID + +SG     F L + M   G+       +LL+ G
Sbjct: 495 VAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKG 554

Query: 433 L-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           L     + +A    +      L P++  +NT++  CC        ++L   M  Y+I+P 
Sbjct: 555 LCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPT 614

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           + T+  L+  + S G +     L+  M+ + + P     S+ I+G  + +N S    + K
Sbjct: 615 LRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEP-----SSSIYGT-RCENESKVASLKK 668

Query: 548 LMERNGVA-PDIAIYNVLLNMLI 569
            M   G+A  D    N+ L+ +I
Sbjct: 669 EMSEKGIAFDDTERTNLELDRII 691



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 203/458 (44%), Gaps = 40/458 (8%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++ GL R G   +A  +  +++ RG  PN +T N ++      G +     L D +L
Sbjct: 198 YNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQML 257

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G KPNVVT++ L++  C+  ++++   L + M    ++PD   YSIL DGL + G  +
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSR 317

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               L   +L +G+ +     S +++     G V +A Q  + +++ G +P    Y+ LI
Sbjct: 318 TMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLI 377

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK-------------------- 400
            G CQ   L  A  +F Q+  R + P  +TY++LI+G CK                    
Sbjct: 378 NGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVD 437

Query: 401 ---------------SGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRF 440
                          +G+L   F++  +M  +G+K +     +VV +   NG + +A+  
Sbjct: 438 PSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAI 497

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
               +   ++PN  ++N+++D             L   M    +   + T+ +L++G+  
Sbjct: 498 LDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCK 557

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
              +  A  L + +  +GL PDV++Y+ II       +    L + + M +  + P +  
Sbjct: 558 NSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRT 617

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           Y+ LL+ L     +     L+  +  + +EP    Y T
Sbjct: 618 YHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT 655



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 32/330 (9%)

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +P L   ++L++ L   GR  +        +  G + D   ++  + A V  GD+  A+ 
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 340 TYDRM--LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
              RM    G   P+  SY+++I GL + G+  +A  +F +++ R + P+ +TY+++IDG
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
             K G L  GF L D M++ G KP                              N+  +N
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKP------------------------------NVVTYN 269

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            L+ G CR  R  +T  L   M  Y++ PD  T+++L  G+   G   + + LF + LK+
Sbjct: 270 VLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKK 329

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G+     T S +++GL K   ++    + +++   G+ P  AIYN L+N   +  +L  A
Sbjct: 330 GVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGA 389

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             +F Q+  R + PD ITYN +I G C + 
Sbjct: 390 FSIFEQMKSRHIRPDHITYNALINGLCKME 419


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 182/343 (53%), Gaps = 30/343 (8%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y  ++ G  R G++ +A  +  +++  G +P++VT N +L  LC   ++ +A  L + +
Sbjct: 18  IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 77

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  P++ TF+TLI+ +C E KL+KA QL++ M+   L PD++ Y+ LIDG+ + G L
Sbjct: 78  RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 137

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            + N+L      R +  + V +S ++D++   G V  A    D M+N G LPN+++Y+ +
Sbjct: 138 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 197

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKG C+ G + +      ++++ ++ P L+TY++LI G+ K  K+ D F L + M K  +
Sbjct: 198 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 257

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           +PD V  ++LING           SV   +    +IF  +   C +              
Sbjct: 258 QPDVVTYNMLINGF----------SVHGNVQEAGWIFEKM---CAK-------------- 290

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
               I+PD  T+  +I G  + G+   A  L  +ML+RG  PD
Sbjct: 291 ---GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 178/350 (50%), Gaps = 30/350 (8%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G VP+ V    ++   C  G + +A  + D ++  G  P+VVT++TL+N  CKE +L  A
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L N M E  + PDL  ++ LI G    G+L +  +L  T L++ L+ D+V +++++D 
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               GD+ +A   +D M +    PN ++YSILI   C++G++ +A G   +++ + + P+
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
           ++TY+S+I G+C+SG +  G      M+   + PD                         
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD------------------------- 225

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
                L  +NTL+ G  +  +  D  KL  +M    ++PDV+T+ +LI G +  G++  A
Sbjct: 226 -----LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 280

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
             +F +M  +G+ PD  TY ++I+G     N      +   M + G APD
Sbjct: 281 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 161/298 (54%), Gaps = 5/298 (1%)

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           GL  D V+++ V+  +   G +  A++  D M+  G LP+V++Y+ L+ GLC++ RL++A
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            GL  ++  R + P L T+++LI G+C  GKL     L+D M+ + L+PD V  + LI+G
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 433 L--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           +   GD   A   +       + PN   ++ L+D  C   +  D       M    I P+
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           ++T+  +I+G    G++S       +M+   ++PD+ITY+ +IHG  K   +     +  
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           +ME+  V PD+  YN+L+N      N+  A  +F ++  +G+EPD  TY ++I G+ +
Sbjct: 251 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 308



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 169/352 (48%), Gaps = 40/352 (11%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P+ V ++ +I  FC+   +  A ++ + M+    +PD++ Y+ L++GL K  RL +   L
Sbjct: 14  PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L    +RG+                                    P++ +++ LI G C 
Sbjct: 74  LNEMRERGVP-----------------------------------PDLCTFTTLIHGYCI 98

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G+L +A  LF  +L +RL P ++TY++LIDG C+ G L     L+D+M  R + P+ V 
Sbjct: 99  EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 158

Query: 426 CSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            S+LI+     G + DA  F  + +   ++PN+  +N+++ G CR    +   K    M 
Sbjct: 159 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 218

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
           +  + PD+IT+  LI G   +  +  A  L   M K  + PDV+TY+ +I+G     N+ 
Sbjct: 219 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 278

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
               +F+ M   G+ PD   Y  ++N  +   N   A +L  ++  RG  PD
Sbjct: 279 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 165/317 (52%), Gaps = 8/317 (2%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKL 169
           G  Y+ +I  + R G + +++ +   M  +G    PD+V    L++ L     +     L
Sbjct: 16  GVIYTMVIGGFCRAGLMSDALRVRDEM--VGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73

Query: 170 CRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
              MR +G     C +  L++G   +G ++ A  +   ++ +   P+IVT N ++  +C 
Sbjct: 74  LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            G +  A+ L+D +      PN VT+S LI++ C++ ++E AF   + M+   ++P+++ 
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ +I G  ++G + +G + L   +   +  D++ +++++  Y+    +  A +  + M 
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
                P+V++Y++LI G    G + EA  +F ++  + +EP   TY S+I+G   +G  +
Sbjct: 254 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 313

Query: 406 DGFSLYDNMIKRGLKPD 422
           + F L+D M++RG  PD
Sbjct: 314 EAFQLHDEMLQRGFAPD 330



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 72/126 (57%)

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M  + + PD + +T++I G    G +S A+ +  +M+  G  PDV+TY+ +++GL K + 
Sbjct: 7   MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 66

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +     +   M   GV PD+  +  L++    E  LD AL+LF  + ++ L PDI+TYNT
Sbjct: 67  LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 126

Query: 599 IICGYC 604
           +I G C
Sbjct: 127 LIDGMC 132


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 250/512 (48%), Gaps = 27/512 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS--------NSVGQY 166
           Y+ LI+   + G +D +  +   M+D G   +P++V    + L+D         +++   
Sbjct: 13  YTTLIDGLCKSGDLDAAQALLQKMADAGC--APNVVT--YTALIDGLCKARRPHDAIQTV 68

Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            ++ R+        Y  L++GL     +++A  + +++++ GF PN +T + ++   C  
Sbjct: 69  KRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRR 128

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN--LMMEMDLVPDLI 284
            ++  A  L   ++L G   N+V +   I  FC+       ++  +   M+E   +PD++
Sbjct: 129 RRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVV 188

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
            Y+  I GL KAG+L +G E+L   +DRG +  DVV F S++        +  A Q +  
Sbjct: 189 TYNTFISGLCKAGKLDKGLEML-EEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKG 247

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRL--VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           ML  G +P+ ++YSI++  L +  RL  V+      Q +       + T+++ I   C+S
Sbjct: 248 MLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRS 307

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI-PNLFI 455
           GK     ++   MI+ G  P+ +  + +I+GL     + DA +   + +      P++  
Sbjct: 308 GKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIF 367

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNI-KPDVITHTVLIRGIASQGSLSSAILLFFQM 514
           FNTL+ G C+  R +   +L + M   NI  PDV+T+  LI G +  GSL  A LL  +M
Sbjct: 368 FNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEM 427

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
              G  P+V+TY+A+I+G  K         +F  M   G  PDI  YN +L+   K   +
Sbjct: 428 QAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMM 487

Query: 575 DAALKLFGQLTDRG--LEPDIITYNTIICGYC 604
             A  ++ QL ++     PD ITY  +I GYC
Sbjct: 488 SKAEGVYQQLKNKTSYCSPDAITYRILIDGYC 519



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 197/403 (48%), Gaps = 34/403 (8%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++I+ G +P++VT N  +  LC  G++     + + +   G  P+VVTF ++I+  CK  
Sbjct: 177 EMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL--LTALDRGLKLDVVV 320
           +++ AFQ++  M+E   VPD + YSI++D L +A RL   +E+L  + A+  G  ++V  
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYT 296

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
            ++ + A    G    A      M+  G LPN++SY+ +I GLC+ G + +A  L  ++L
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 356

Query: 381 IRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALR 439
                +P ++ +++LI GFCK+G+L     L   M  + +                    
Sbjct: 357 DSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNI-------------------- 396

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                     +P++  +NTL+DG  +         L   M     KP+V+T+  LI G A
Sbjct: 397 ---------CVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYA 447

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG--VAPD 557
             G    A  LF +M  +G  PD+ITY+ ++    K   +S    +++ ++      +PD
Sbjct: 448 KHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPD 507

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              Y +L++   +  + +  L L  ++T RG   D  TYN +I
Sbjct: 508 AITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLI 550



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 211/477 (44%), Gaps = 81/477 (16%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G+  ++VT   ++  LC +G +  A +L   +   G  PNVVT++ LI+  CK  +   A
Sbjct: 5   GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 64

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG--------------NELLLTAL--- 310
            Q    M+     PDL+ Y+ LI GL  A R+ +               N +  + L   
Sbjct: 65  IQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIW 124

Query: 311 ---------DRGLKLDVVVFSSV------MDAYVGIGDVGRAVQTY-----DRMLNGGFL 350
                     RGL  ++++  SV      +D   G  +       Y     D M+  G +
Sbjct: 125 NCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRI 184

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V++Y+  I GLC+ G+L +   +  ++    + P ++T+ S+I G CK+ ++ D F +
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG-------DALRFFFQSVRMTLI------------- 450
           +  M++RG  PD++  S++++ L         D +    Q+++   +             
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304

Query: 451 ----------------------PNLFIFNTLMDGCCRLKRATDTVKLF-MLMGMYNIKPD 487
                                 PNL  +N ++DG C+     D  KL   ++     KPD
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 364

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGL-TPDVITYSAIIHGLFKGKNISVGLHMF 546
           VI    LI G    G LS A  L  +M  + +  PDV+TY+ +I G  K  ++     + 
Sbjct: 365 VIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLL 424

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           + M+  G  P++  Y  L+N   K    + A  LF +++ +G  PDIITYNT++  +
Sbjct: 425 QEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAF 481



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 190/376 (50%), Gaps = 18/376 (4%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G   +VVT++TLI+  CK   L+ A  L   M +    P+++ Y+ LIDGL KA R  + 
Sbjct: 5   GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 64

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
            + +   L  G + D+V ++S++        +  A      ++  GF PN I+YS L+  
Sbjct: 65  IQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIW 124

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG------KLRDGFSLYDNMIK 416
            C++ RL +A GL  ++++R    +L+ Y   I GFC++       + RDG    D MI+
Sbjct: 125 NCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDG----DEMIE 180

Query: 417 RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G  PD V  +  I+GL     +   L    +  R  + P++  F +++ G C+  R  D
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS--AILLFFQMLKRGLTPDVITYSAI 529
             ++F  M      PD +T+++++  ++    L +   +L   Q +K G   +V T++A 
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG- 588
           I  L +     +  ++   M  +G  P++  YN +++ L K  N+D A KL  ++ D G 
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC 360

Query: 589 LEPDIITYNTIICGYC 604
            +PD+I +NT+I G+C
Sbjct: 361 CKPDVIFFNTLISGFC 376



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 133/264 (50%), Gaps = 7/264 (2%)

Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
           M   G+  +V++Y+ LI GLC+ G L  A  L  ++      P+++TY++LIDG CK+ +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNT 458
             D       M++ G +PD V  + LI+GL     M DA     + VR    PN   ++T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF--FQMLK 516
           L+   CR +R      L   M +     +++ +   I G       SS        +M++
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
            G  PDV+TY+  I GL K   +  GL M + M+R G+ PD+  +  +++ L K   +D 
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 577 ALKLFGQLTDRGLEPDIITYNTII 600
           A ++F  + +RG  PD +TY+ ++
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIML 264



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 11/257 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+F+I+   + G +D++ ++   M D G    PD++    L+S    +  + Q ++L   
Sbjct: 332 YNFVIDGLCKSGNVDDAWKLSRKMLDSGC-CKPDVIFFNTLISGFCKAGRLSQAHQLLIE 390

Query: 173 MRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           M+ K  CV     Y  L++G  + G ++ A  + +++   G  PN+VT   ++     +G
Sbjct: 391 MKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHG 450

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD--LVPDLII 285
               A SLFD +   G  P+++T++T+++AF K   + KA  +Y  +        PD I 
Sbjct: 451 MYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAIT 510

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV-GRAVQTYDRM 344
           Y ILIDG  +A   ++G  LL     RG   D   ++ ++       +V  +A+  Y +M
Sbjct: 511 YRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQM 570

Query: 345 LNGGFLPNVISYSILIK 361
           L+   +P+   ++ L++
Sbjct: 571 LDQDCVPSASIFNSLVR 587



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%)

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M   G    V+TY+ +I GL K  ++     + + M   G AP++  Y  L++ L K   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
              A++   ++   G EPD++TYN++I G C  N
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMAN 94


>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
 gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
          Length = 821

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 228/477 (47%), Gaps = 30/477 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS+LI ++ ++G ++++      M   GI ++  +V  L+ CL     + +     +  R
Sbjct: 337 YSYLIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFR 396

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G      +Y   M+   + G +  A  +  +++  G VP+ +    ++   C+ G+  
Sbjct: 397 DLGLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETE 456

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA  +F+ +L    KP+VVT++ L + + +   + K F L   MM+  L P+ + Y I I
Sbjct: 457 NAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAI 516

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G L E   L     ++G+    V++SS++  Y+  G    A   + R+   G +
Sbjct: 517 AGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNM 576

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            + +S S LI GLC+  ++ EA  +   +L + + P +++YS LI  +C+S  +R+    
Sbjct: 577 VDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLW 636

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + +M++RGL  D    ++L+NG      + +A   F Q V + + P++  +  L+DG   
Sbjct: 637 FHDMVERGLS-DVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDG--H 693

Query: 466 LKRA------------------TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
           LK                    T    L   M    I+PDV  +TVLI G      L  A
Sbjct: 694 LKETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAEYLEEA 753

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             LF +ML +GLTPDV  Y+ +I+G      I+    +F+ M   G+ PD+  ++VL
Sbjct: 754 RGLFDEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFSVL 810



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 206/446 (46%), Gaps = 22/446 (4%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y +L++   + G +E A++    ++  G   N      +L+ L   G I      F    
Sbjct: 337 YSYLIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFR 396

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
            +G   + V ++  ++A+CK   + +A +L N MM   LVPD I Y+ LI+G    G  +
Sbjct: 397 DLGLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETE 456

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              ++    L   +K DVV ++ +   Y   G V +     + M++ G  PN ++Y I I
Sbjct: 457 NAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAI 516

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ G L EA  LF  V  + ++   + YSS++ G+  SG     + L+  + K+G  
Sbjct: 517 AGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNM 576

Query: 421 PDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
            D + CS LINGL  D     A       +   ++P++  ++ L+   C+ +   +    
Sbjct: 577 VDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLW 636

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M    +  DV  +T+L+ G    G L  A  LF QM+  G+ PDV+ Y+ ++ G  K
Sbjct: 637 FHDMVERGLS-DVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLK 695

Query: 536 ------GKNISVGLHMFKL----------MERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
                  + I+     F L          M+   + PD+  Y VL+    K   L+ A  
Sbjct: 696 ETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAEYLEEARG 755

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCS 605
           LF ++  +GL PD+  Y T+I GYCS
Sbjct: 756 LFDEMLAKGLTPDVDAYTTLINGYCS 781



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 174/383 (45%), Gaps = 17/383 (4%)

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  L  +G  P +   + L+    + +        Y+ M    L  D    +I+   LF
Sbjct: 175 MFCHLCRLGFVPTLWACNFLLKFVSQSSDSHMVVAAYDRMKCFQLTLDAQSLNIVTRSLF 234

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV- 353
           +A +  E   + +  ++ G+KLDV  +SS +   +G+ D G+    Y+ +     L  + 
Sbjct: 235 QANKADEAFRVWVGMIEMGVKLDVQGYSSFI---IGLCDCGKYDLAYNMVRRYAVLQEIS 291

Query: 354 --------ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
                    +Y+++I GLC++ +L EA  +          P L  YS LI   CK G L 
Sbjct: 292 QERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMGNLE 351

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLM 460
             +   ++M+  G++ +  +   L+      G++ + +  F +   + L  +  ++N  M
Sbjct: 352 KAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAM 411

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           D  C+L    + VKL   M    + PD I +T LI G   +G   +A  +F QMLK  + 
Sbjct: 412 DAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIK 471

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PDV+TY+ +  G  +   +     + + M   G+ P+   Y + +    +  NL  A  L
Sbjct: 472 PDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVL 531

Query: 581 FGQLTDRGLEPDIITYNTIICGY 603
           F  + ++G++   + Y++++CGY
Sbjct: 532 FNIVEEKGIDNIDVLYSSMVCGY 554



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 125/292 (42%), Gaps = 11/292 (3%)

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++ AY    D    V  +  +   GF+P + + + L+K + Q          + ++   +
Sbjct: 159 LIKAYTTCHDAQETVDMFCHLCRLGFVPTLWACNFLLKFVSQSSDSHMVVAAYDRMKCFQ 218

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-------- 435
           L     + + +     ++ K  + F ++  MI+ G+K D    S  I GL          
Sbjct: 219 LTLDAQSLNIVTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAY 278

Query: 436 DALRFF--FQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
           + +R +   Q +    +P   F +N ++DG C+  +  +  K+  +   +   PD+  ++
Sbjct: 279 NMVRRYAVLQEISQERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYS 338

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI      G+L  A      M+  G+  +     +++  L K   IS  +  F+     
Sbjct: 339 YLIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDL 398

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           G+  D  +YNV ++   K  N++ A+KL  ++   GL PD I Y  +I GYC
Sbjct: 399 GLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYC 450



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 99/276 (35%), Gaps = 61/276 (22%)

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
            D    V  YDRM       +  S +I+ + L Q  +  EA  ++  ++   ++  +  Y
Sbjct: 202 SDSHMVVAAYDRMKCFQLTLDAQSLNIVTRSLFQANKADEAFRVWVGMIEMGVKLDVQGY 261

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIP 451
           SS I G C  GK    + L  NM++R                         Q +    +P
Sbjct: 262 SSFIIGLCDCGK----YDLAYNMVRR---------------------YAVLQEISQERVP 296

Query: 452 -NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
              F +N ++DG C+  +  +  K+        IK                         
Sbjct: 297 IEAFAYNMVIDGLCKEMKLEEAEKVL------EIKT------------------------ 326

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
                + G TPD+  YS +IH   K  N+    +  + M  +G+  +  I   LL  L K
Sbjct: 327 -----RHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRK 381

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              +   +  F +  D GL  D + YN  +  YC L
Sbjct: 382 LGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKL 417


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 226/448 (50%), Gaps = 11/448 (2%)

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR 190
           S+ +++ M  + + +S   +  L+S L  + +   +  + R         +  ++  L  
Sbjct: 441 SLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCS 500

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-KPNVV 249
            G    A  + RQ+ +    PN VT N ++   C  G++  A  +   +   G   PN  
Sbjct: 501 AGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQY 556

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMM-EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           T+ T+I+ +CK  ++++A ++++ M+ + ++ P+ ++Y+ LI G    G+L         
Sbjct: 557 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDR 616

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
            ++RG+ + V  ++ ++ A    G    A +  + M   G  P+V +Y+ILI G C++G 
Sbjct: 617 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 676

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           + +A  +F  +  R +  +++TY++LI    K G++++   L+D  ++RG++PD V+ + 
Sbjct: 677 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 736

Query: 429 LIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LIN     G +  A     +  +  + P+   +NTLM G C L R  +  KL   M    
Sbjct: 737 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 796

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           I+PD++T+  LI G + +G +  A+ +  +M+ +G  P ++TY+A+I GL K        
Sbjct: 797 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 856

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKE 571
           +M K M  NG+ PD + Y  L+  L  E
Sbjct: 857 NMVKEMVENGITPDDSTYISLIEGLTTE 884



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 201/406 (49%), Gaps = 11/406 (2%)

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T N +L+ LC  G+   A  L   +    P+PN VT++T+I  FC   +++ A  +   
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 544

Query: 274 MMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYVGI 331
           M E   + P+   Y  +I G  K GR+ E  ++    L +G +K + V++++++  Y   
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G +  A+   DRM+  G    V +Y++L+  L   GR  EA  L  ++  + L P + TY
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVR 446
           + LI+G CK G ++    +++NM +RG++   V  + LI      G + +  + F ++VR
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             + P+L ++N L++            ++   M    I PD +T+  L+RG+   G +  
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L  +M +RG+ PD++TY+ +I G     ++   L +   M   G  P +  YN L+ 
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
            L K    D A  +  ++ + G+ PD  TY ++I G  + +   ID
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAID 890



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 177/344 (51%), Gaps = 11/344 (3%)

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           AF L+  M  + L      ++I++  L  AG+     ELL     +  + + V +++V+ 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLR----QMPRPNAVTYNTVIA 527

Query: 327 AYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR-RL 384
            +   G V  A+     M   GG  PN  +Y  +I G C+ GR+ EA  +F ++L +  +
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALR 439
           +P  + Y++LI G+C  GKL       D M++RG+       +LL++ L  D     A  
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              +     L P++F +N L++G C+       +++F  M    ++  V+T+T LI  ++
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G +     LF + ++RG+ PD++ Y+A+I+      NI     +   ME+  +APD  
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 767

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            YN L+  L     +D A KL  ++T+RG++PD++TYNT+I GY
Sbjct: 768 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 811



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 196/407 (48%), Gaps = 39/407 (9%)

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           ++++ +K L  L +   +  A S    LLL      V   +T +  + +   L       
Sbjct: 400 SVLSADKALSPLAVLPHLDGAPSSLPNLLLTA-SAAVRPHATSLRLYSRMKSLSLPISTA 458

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           +L   +  +P    +++  D +F   RL+             L L    F+ ++      
Sbjct: 459 SLHPLLSALPSAPAFALFAD-MF---RLR-------------LPLCTTTFNIMLRHLCSA 501

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLLT 390
           G   RA++   +M      PN ++Y+ +I G C +GR+  A  +  ++  R  + P+  T
Sbjct: 502 GKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 557

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRG-LKPDAVVCSLLINGL-----MGDAL----RF 440
           Y ++I G+CK G++ +   ++D M+ +G +KP+AV+ + LI G      +  AL    R 
Sbjct: 558 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 617

Query: 441 FFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
             + V MT+   NL +    MDG     R T+  +L   MG   + PDV T+ +LI G  
Sbjct: 618 VERGVAMTVATYNLLVHALFMDG-----RGTEAYELVEEMGGKGLAPDVFTYNILINGHC 672

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G++  A+ +F  M +RG+   V+TY+A+I+ L K   +     +F    R G+ PD+ 
Sbjct: 673 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 732

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +YN L+N      N+D A ++ G++  + + PD +TYNT++ G C L
Sbjct: 733 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 779



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 186/367 (50%), Gaps = 36/367 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I  + ++G++DE+V++F  M   G  + P+ V                        
Sbjct: 558 YGTVISGWCKVGRVDEAVKVFDEMLTKG-EVKPEAV------------------------ 592

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                +Y  L+ G   +G ++ A     ++++RG    + T N ++  L ++G+   A  
Sbjct: 593 -----MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G  P+V T++ LIN  CKE  ++KA +++  M    +   ++ Y+ LI  L 
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G+++E ++L   A+ RG++ D+V+++++++++   G++ RA +    M      P+ +
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 767

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ L++GLC  GR+ EA  L  ++  R ++P L+TY++LI G+   G ++D   + + M
Sbjct: 768 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 827

Query: 415 IKRGLKP-----DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG-CCRLKR 468
           + +G  P     +A++  L  NG   DA     + V   + P+   + +L++G     +R
Sbjct: 828 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 887

Query: 469 ATDTVKL 475
           A D  +L
Sbjct: 888 AIDDERL 894


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 215/455 (47%), Gaps = 60/455 (13%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y  L++ LLR+ ++     ++  + + G  PN+ T N +++ LC N ++G A  + D +
Sbjct: 130 LYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEM 189

Query: 240 LLVGPKPNVVTFSTLIN------------------------------AFCKEAKLEKAFQ 269
              G  P+ VT++T+++                              A C+E ++++ F 
Sbjct: 190 ARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFS 249

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           + + M+   L P++I Y+ ++D   KAG L+    +L   +  G   +VV F++++    
Sbjct: 250 VVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLF 309

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
             G V  A+  +  M+  G+ P+ +SY+ILI+GLC  G L  A  +   +      P++ 
Sbjct: 310 DDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVR 369

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL 449
           TYS+LIDGF K+G L    S++++M + G K                             
Sbjct: 370 TYSTLIDGFSKAGDLGGAISIWNDMSRSGCK----------------------------- 400

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            PN+ ++  ++D  C+         L   M + N  P+ +T   LIR +     +  A+ 
Sbjct: 401 -PNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALG 459

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           +F +M + G  P+  TY+ +IHGLF+  N    LHM   M+ +G+   +  YN +++ L 
Sbjct: 460 VFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLC 519

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +      A+   G++  +G++P+  T++ II  YC
Sbjct: 520 QTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYC 554



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 116/551 (21%), Positives = 230/551 (41%), Gaps = 71/551 (12%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCD-------YSFLIENYVRIGKIDESVEIFAYMSDMGIYL 145
           + G      + F  ++ D GC        Y+ LI+  +R   +   V ++  M   G++ 
Sbjct: 102 RAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHP 161

Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG--------------FC------------ 179
           +      L+  L  +N VG   K+   M  KG               C            
Sbjct: 162 NVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVL 221

Query: 180 --------VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
                    Y  ++  L R+  ++  F +   ++ RG  PN++T   I+   C  G++  
Sbjct: 222 AAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRM 281

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A ++   +++ G  PNVVTF+ L+     + ++  A  ++  M+     P  + Y+ILI 
Sbjct: 282 ACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIR 341

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL   G LK  + +L +    G   +V  +S+++D +   GD+G A+  ++ M   G  P
Sbjct: 342 GLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKP 401

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           NV+ Y+ ++   C++    +A  L  ++L+    P+ +T+++LI   C   ++     ++
Sbjct: 402 NVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVF 461

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             M + G                               +PN   +N L+ G  R     D
Sbjct: 462 HEMRRHG------------------------------CVPNGRTYNELIHGLFREGNCGD 491

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            + +   M  + I+  ++T+  ++ G+        A++   +M+ +G+ P+  T+SAIIH
Sbjct: 492 ALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIH 551

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
              K   + +   M   M       +I +Y +L+  L  +  L  A+    ++   G+ P
Sbjct: 552 AYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYP 611

Query: 592 DIITYNTIICG 602
           + +T+N ++ G
Sbjct: 612 NTVTWNVLVRG 622



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 193/412 (46%), Gaps = 41/412 (9%)

Query: 133 EIFAYMSDM-GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK--------GFCVYEF 183
           E+F+ +SDM G  L P+++    + +VD+       ++  A+  +            +  
Sbjct: 246 EVFSVVSDMVGRGLQPNVIT--YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTA 303

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+ GL   G + +A  M R ++  G+ P+ V+ N +++ LC  G +  ASS+ + +   G
Sbjct: 304 LVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHG 363

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PNV T+STLI+ F K   L  A  ++N M      P++++Y+ ++D   K     +  
Sbjct: 364 CFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAK 423

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L+   L      + V F++++ +      VGRA+  +  M   G +PN  +Y+ LI GL
Sbjct: 424 SLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGL 483

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
            ++G   +A  +  ++    +E SL+TY++++ G C++   R+       MI +G++P+A
Sbjct: 484 FREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNA 543

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
                                         F F+ ++   C+         +   M + N
Sbjct: 544 ------------------------------FTFSAIIHAYCKEGEVRMAAWMLGAMNVVN 573

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              +++ +T+L+  + +Q  L  A+    +ML  G+ P+ +T++ ++ G+F+
Sbjct: 574 CHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFR 625


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 245/565 (43%), Gaps = 58/565 (10%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +F K  + F    D        +S L+  + + GK+D++ E+   M +  + L+      
Sbjct: 116 EFDKALDVFNEIHDRGWVDEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCS 175

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+   V  + V +   L   M+  GF     +Y+ ++ GL     ++ A  ++ ++    
Sbjct: 176 LIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFK 235

Query: 209 FVPNI---------------VTC------------------NKILKRLCINGQIGNASSL 235
             P++               +TC                  N +L  L  NG +  A  L
Sbjct: 236 IQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHL 295

Query: 236 FDVLLL--------VGP--------KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
              + +        +G          PN  TFS +IN   K   L+ A  L+  M  +  
Sbjct: 296 LQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGC 355

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            PDL++Y+ LIDGL  + RL+E   LL    + G++      + +        D+  A+ 
Sbjct: 356 KPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALH 415

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
              +M   G +P +   + L+K LC+ G+ VEAC     +     +P ++ YS+ +DG  
Sbjct: 416 LLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLI 475

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLF 454
           K  ++     L+ ++  +G  PD +  ++LI GL     + +A     +     L+P+  
Sbjct: 476 KIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAV 535

Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
            +NTL+DG C+     + +    +M     +P+VIT++ LI G+ + G    A++L+ +M
Sbjct: 536 TYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEM 595

Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
            ++G TP  I Y A IHGL      +  L   + ME   + PD  +Y  LLN  + + N 
Sbjct: 596 GRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQ 655

Query: 575 DAALKLFGQLTDRGLEPDIITYNTI 599
             A ++  ++ D+G  PD+   N I
Sbjct: 656 PLAFEILQEMVDKGKFPDLHDKNHI 680



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 252/583 (43%), Gaps = 91/583 (15%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQ-FGKTYNFFRLF------RDSLGDFGCDYS----FL 118
           LI+  ++    D A H+FDKM    F    + + +          +    C YS    F 
Sbjct: 176 LIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFK 235

Query: 119 IENYVRI--------GKIDESVEIFAYM-SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           I+  V+I         K +E    F  M  DM    S  L   +++ LVD+ SV + Y L
Sbjct: 236 IQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHL 295

Query: 170 CRAM---------------RGKGF-----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
            +A+               RGK         +  ++NGL++ G ++ A  + R + + G 
Sbjct: 296 LQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGC 355

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P+++  N ++  LC + ++  +  L   +   G +P   T + +    C+   +  A  
Sbjct: 356 KPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALH 415

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L   M     VP +   + L+  L K G+  E  + L+   + G + D+V +S+ +D  +
Sbjct: 416 LLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLI 475

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            I +V +A++ +  +   G+ P+VI+Y+ILIKGLC+  R+ EA  L  ++  + L PS +
Sbjct: 476 KIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAV 535

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL 449
           TY++LIDG CK+  L +       MI++  +P+ +  S LINGL                
Sbjct: 536 TYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGL---------------- 579

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
                         C   R  D + L+  MG     P  I +   I G+++ G  + A++
Sbjct: 580 --------------CNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALV 625

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD------IAIYNV 563
              +M +R + PD   Y  +++      N  +   + + M   G  PD      I++ N 
Sbjct: 626 YLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKNHISVRNA 685

Query: 564 LL-------------NMLIKECNLDAALKLFGQLTDRGLEPDI 593
           +L             N+L K     A+L + G +TD G+EP I
Sbjct: 686 ILKFSEDARTSSSIKNLLAKGSIPSASLSVTG-ITD-GVEPAI 726



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 191/447 (42%), Gaps = 90/447 (20%)

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           T + ++  +C  A+ +KA  ++N + +   V D  ++SIL+    K G++ +  EL+ T 
Sbjct: 103 TLTPVLQVYCNMAEFDKALDVFNEIHDRGWV-DEYVFSILVLAFSKWGKVDKACELIETM 161

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
            ++ ++L+   F S++  +V    V +A+  +D+M   GF P++  Y ++I GLC    +
Sbjct: 162 EEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDV 221

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF--------------------- 408
            +A  L+ ++   +++P +   + LI  F K  +L   F                     
Sbjct: 222 KKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLN 281

Query: 409 SLYDN-------------------------MIKRG---LKPDAVVCSLLINGLM--GD-- 436
           SL DN                          + RG   + P++   S++INGL+  GD  
Sbjct: 282 SLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLD 341

Query: 437 -ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH---- 491
            A+  F    R+   P+L ++N L+DG C   R  ++  L   M    I+P   T+    
Sbjct: 342 LAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIF 401

Query: 492 -------------------------------TVLIRGIASQGSLSSAILLFFQMLKRGLT 520
                                          T L++ +   G    A      M + G  
Sbjct: 402 GCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQ 461

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD++ YSA + GL K + +   L +F+ +   G  PD+  YN+L+  L K   +  A  L
Sbjct: 462 PDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNL 521

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLN 607
             ++ ++GL P  +TYNT+I G C  +
Sbjct: 522 LHEMEEKGLVPSAVTYNTLIDGLCKTD 548


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 224/481 (46%), Gaps = 25/481 (5%)

Query: 143 IYLSPDLVQRLMSCLVDSN------SVGQYYKLCRAMRGKGFCVYEFLMNGLLRK--GVI 194
           + LSP L   L + + + +      S+   + L  A R +       L++ L+R+     
Sbjct: 55  LRLSPGLASELYALIAEPSHAFTPASLASLHSL--AARHRIPPPSALLLSKLVRRFSSPA 112

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           E A  +   +      P+I   N +L  L   G +   + LF  +     KP+VVT+  L
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172

Query: 255 INAFCKEAKLEKAFQLYNLMME--MDLVPDLIIYSILIDGLFKAGRLKEG----NELLLT 308
           +N  CK   +  A ++ + M     D+ PD+ I + ++DGL K GRL++     +E +  
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
               G   + V ++ + DA+  +GD+G A +   RM   G  PNVI+ + +I GLC+ GR
Sbjct: 233 V--HGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGR 290

Query: 369 LVEACGLFGQ--VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           +  A   F +   +      + +TYS+L   F     +     L+  M   G +PDAV+ 
Sbjct: 291 VGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMY 350

Query: 427 SLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
             +I+GL       DA        +     +   +N L+ G CR K+  +  +L   M  
Sbjct: 351 FTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKG 410

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             ++PDV T+  L+ G+   G  S+   L   M+  G  P V+T+  ++HG  K      
Sbjct: 411 VGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDE 470

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L +F+ M+   + P+  IYN L++ L K   +D A+KLF ++ ++ +  ++ TYN ++ 
Sbjct: 471 ALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLK 530

Query: 602 G 602
           G
Sbjct: 531 G 531



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 180/375 (48%), Gaps = 19/375 (5%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P P+ +  S L+  F   A  E A  L + +      PD+ I++ L+  L +AG L+   
Sbjct: 94  PPPSALLLSKLVRRFSSPA--EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMT 151

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG--FLPNVISYSILIK 361
           EL  +  D  +K DVV +  +++     G VG A++  DRM + G    P++   + ++ 
Sbjct: 152 ELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVD 211

Query: 362 GLCQQGRLVEACGLFGQVLIRRLE---PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           GLC+ GRL +A  +F    +R +    P+ +TY+ L D FC+ G +     +   M K G
Sbjct: 212 GLCKIGRLQQAI-IFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEG 270

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP----NLFIFNTLMDGCCRLKRA 469
           + P+ +  + +I GL     +G AL FF +  + T+ P    N   ++TL          
Sbjct: 271 VAPNVITMNTIIGGLCRVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLASAFLHCNNV 328

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
              ++LF  M  +  +PD + +  +I G+   G L  A      M K G   D   Y+ +
Sbjct: 329 DMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNIL 388

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I G  + K +     + + M+  G+ PD+  YN LL+ L K  +  A  +L G + D G 
Sbjct: 389 IGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGC 448

Query: 590 EPDIITYNTIICGYC 604
           +P ++T+ T++ GYC
Sbjct: 449 QPSVVTFGTLVHGYC 463



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 142/592 (23%), Positives = 248/592 (41%), Gaps = 79/592 (13%)

Query: 35  ANAILANLIKTNNPTPAI---------------QFFKWTHNCVSSPNIAQLIHVLLQSDM 79
           A AILA L+  + P+ A                       +  +  ++A L  +  +  +
Sbjct: 34  AAAILAILLHGHTPSAATLSLLRLSPGLASELYALIAEPSHAFTPASLASLHSLAARHRI 93

Query: 80  RDVASHVFDKMVIQFGKTYNFFRLFRDSL--GDFGCDYSF---LIENYVRIGKIDESVEI 134
              ++ +  K+V +F          RDSL  G    D S    L+    R G +    E+
Sbjct: 94  PPPSALLLSKLVRRFSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTEL 153

Query: 135 FAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVI 194
           F  M D  +   PD+V                              Y  L+NGL + G +
Sbjct: 154 FTSMRDASV--KPDVV-----------------------------TYGILLNGLCKSGHV 182

Query: 195 ENAFHMHRQVIQRG--FVPNIVTCNKILKRLCINGQIGNASSLFDVLL--LVGPKPNVVT 250
            +A  +  ++   G    P+I   N ++  LC  G++  A    D  +  + G  PN VT
Sbjct: 183 GDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVT 242

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL---- 306
           ++ L +AFC+   +  A ++   M +  + P++I  + +I GL + GR+    E      
Sbjct: 243 YNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKR 302

Query: 307 -LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
            +    RG   + V +S++  A++   +V  A++ +  M + G  P+ + Y  +I GL Q
Sbjct: 303 TVWPEARG---NAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQ 359

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            GRL++AC     +     +     Y+ LI GFC+  KL + + L + M   GL+PD   
Sbjct: 360 AGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYT 419

Query: 426 CSLLINGL--MGDALRFFFQSVRMTL--------IPNLFIFNTLMDGCCRLKRATDTVKL 475
            + L++GL   GD     F +V   L         P++  F TL+ G C+  +  + +++
Sbjct: 420 YNTLLSGLCKAGD-----FSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRI 474

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           F  M    I+P+ + +  LI  +     +  AI LF +M ++ +  +V TY+A++ GL  
Sbjct: 475 FRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQD 534

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            K       +   M      P+    +VL+  L  E      LK F Q  D+
Sbjct: 535 KKMAEKAFELMDRMREERCTPNYVTVDVLMEWL-PEIGETERLKCFMQQRDQ 585



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 4/123 (3%)

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P  +  + L+R  +S     +A  L   +      PD+  +++++  L +  N+     +
Sbjct: 96  PSALLLSKLVRRFSSPAE--AAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTEL 153

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE--PDIITYNTIICGY 603
           F  M    V PD+  Y +LLN L K  ++  ALK+  +++  G +  PDI   NT++ G 
Sbjct: 154 FTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGL 213

Query: 604 CSL 606
           C +
Sbjct: 214 CKI 216


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/552 (23%), Positives = 259/552 (46%), Gaps = 49/552 (8%)

Query: 98  YNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           Y F  + R +L      Y+ +I+ Y R  +ID+++ I + M   G+  S      L++  
Sbjct: 351 YVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGY 410

Query: 158 VDSNSVGQYYKLCRAMRGKGFCVYE----FLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
              + +G    L   ++ +G  + +     L++G  + G I  A  + + + + G  P++
Sbjct: 411 CKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDV 470

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
           +T + ++  +C   ++     +   +   G  PN V ++TLI  +CK   +++A + +  
Sbjct: 471 ITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVD 530

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           +    LV + +I++ L+   ++ G + E            +  D V F+ ++D+Y   G+
Sbjct: 531 IYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGN 590

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV----------------------- 370
           +  A   YD M+  G+ PNV +Y  L++GLCQ G LV                       
Sbjct: 591 IVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNA 650

Query: 371 ------------EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
                       EA  L  +++     P + TY+ L+ GFC+ GK+     +   M+++G
Sbjct: 651 LLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKG 710

Query: 419 LKPDAVVCSLLINGLMGD----ALRFFFQSV--RMTLIPNLFIFNTLMDGCCRLKRATDT 472
           + PD V  + L+NGL+ +    A  + F  +  +  L  +   +N+LM+G  +  R  +T
Sbjct: 711 VVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLK-SRNVNT 769

Query: 473 VKLFMLMGMY--NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +K  M+  MY   + P+  ++ +L+ G   +G  S ++ L+  M+++G+ PD +TY  +I
Sbjct: 770 IKR-MMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLI 828

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL +   I + +   + M   G+ PD  ++++L+    ++  +  AL++F  +    + 
Sbjct: 829 LGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMS 888

Query: 591 PDIITYNTIICG 602
           P   T++ +I G
Sbjct: 889 PSSKTFSAMING 900



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/546 (24%), Positives = 250/546 (45%), Gaps = 45/546 (8%)

Query: 99   NFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
            +F  ++R  L      ++ L+  + R G I E+     YMS M I        R++    
Sbjct: 527  HFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYC 586

Query: 159  D-SNSVGQ---YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
               N VG    Y  + R       C Y+ L+ GL + G +  A      ++   F  +  
Sbjct: 587  HRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEK 646

Query: 215  TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
            T N +L  +C  G +  A  L + ++     P++ T++ L++ FC++ K+  A  +  +M
Sbjct: 647  TFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMM 706

Query: 275  MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGD 333
            +E  +VPD + Y+ L++GL   G++K  + +    +   GL  D + ++S+M+ Y+   +
Sbjct: 707  LEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRN 766

Query: 334  VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
            V    +    M      PN  SY+IL+ G  ++G+  ++  L+  ++ + + P  +TY  
Sbjct: 767  VNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRL 826

Query: 394  LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF------- 441
            LI G  + G +       + M+  G+ PD +V  +LI        M +AL+ F       
Sbjct: 827  LILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLH 886

Query: 442  ----------------------------FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
                                         + +++ L PN   +  L++  CR+       
Sbjct: 887  MSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAF 946

Query: 474  KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +L   M    I P  +  + +IRG+   G L  A+++F  M++ G+ P V T++ ++H L
Sbjct: 947  RLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSL 1006

Query: 534  FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
             K   I+  LH+ +LME   +  D+  YNVL+  L K+ ++  AL L+G++  +GL P+I
Sbjct: 1007 CKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNI 1066

Query: 594  ITYNTI 599
             TY T+
Sbjct: 1067 TTYITL 1072



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/511 (23%), Positives = 232/511 (45%), Gaps = 80/511 (15%)

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
           C Y  L+NG  R+G I +A ++   ++++  VP++ T   ++   C N +I  A S+   
Sbjct: 331 CTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSE 390

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           + + G  P+ +T+S L+N +CK + L  A  L   +    +  +  + +ILIDG  + G 
Sbjct: 391 MQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGE 450

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           + +  ++L +  + G+  DV+ +S++++    +  +    +   RM   G LPN + Y+ 
Sbjct: 451 ISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTT 510

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRL--EPSL---------------------------- 388
           LI   C+ G + EA   F  +  R L   P +                            
Sbjct: 511 LICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMN 570

Query: 389 -----LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---------- 433
                ++++ +ID +C  G +   FS+YD+M++ G  P+      L+ GL          
Sbjct: 571 ISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQAR 630

Query: 434 ------------------------------MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
                                         + +AL    + ++   +P++  +  L+ G 
Sbjct: 631 QFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGF 690

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML-KRGLTPD 522
           CR  +    + +  +M    + PD + +T L+ G+ ++G + +A  +F +++ K GL  D
Sbjct: 691 CRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYAD 750

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            I Y+++++G  K +N++    M   M +N V P+ A YN+L++  +K      +L L+ 
Sbjct: 751 CIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYK 810

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSC-LID 612
            +  +G+ PD +TY  +I G   L+ C LID
Sbjct: 811 YMVRKGIRPDNVTYRLLILG---LSECGLID 838



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/561 (22%), Positives = 251/561 (44%), Gaps = 52/561 (9%)

Query: 71  IHVLLQSDMRDVASHVFDKMVIQ-FGKTYNFFRLFRDSLGDFGCD----YSFLIENYVRI 125
           + +L+Q+ M   A  V   + +  F  T  F  L R ++  F       +  L++ YV+ 
Sbjct: 111 VPILIQAQMHSQAMSVLKHLAVTGFSCTAIFTSLLR-TISRFDPTNHVVFELLVKAYVKE 169

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLM 185
            K+ ++     +M D G   SP          V  N++                     +
Sbjct: 170 RKVLDAAVAVLFMDDCGFKASP----------VSCNTI---------------------L 198

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           N L+ +G  ++ +   R+ + R F   + TCN +L  LC NG+   A  +   +      
Sbjct: 199 NALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS 258

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
            N VT++T+++ + K+ + + A  +   M    +  D+  Y+I+ID L +  R      L
Sbjct: 259 -NSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLL 317

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L       L  D   ++++++ +   G +  A   ++ ML    +P+V +Y+ +I G C+
Sbjct: 318 LKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCR 377

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
             R+ +A  +  ++ I  + PS LTYS+L++G+CK   L     L +++  RG+  +  +
Sbjct: 378 NRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTM 437

Query: 426 CSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            ++LI+G      +  A +         + P++  ++ L++G CR+ +  +T ++   M 
Sbjct: 438 RTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQ 497

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              I P+ + +T LI      G +  A+  F  + +RGL  + + ++A++H  ++   I+
Sbjct: 498 KSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMIT 557

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              H  + M R  ++ D   +N +++      N+  A  ++  +   G  P++ TY  ++
Sbjct: 558 EAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLL 617

Query: 601 CGYC---------SLNSCLID 612
            G C            SCL+D
Sbjct: 618 RGLCQGGHLVQARQFMSCLLD 638



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 239/518 (46%), Gaps = 61/518 (11%)

Query: 146 SPDLVQRLMSCLVDSNSVGQ----YYKLCRAMRGKGFCV---------------YEFLMN 186
           + D++Q++ SC + SNSV      ++ + +       CV               Y  +++
Sbjct: 245 AEDMLQKMKSCHI-SNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMID 303

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
            L R      AF + +++ +    P+  T N ++      G+I +A  +F+ +L     P
Sbjct: 304 KLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVP 363

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           +V T++T+I+ +C+  +++KA  + + M    ++P  + YS L++G  K   L     L+
Sbjct: 364 SVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLM 423

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
                RG+ ++  + + ++D +  +G++ +A Q    M   G  P+VI+YS LI G+C+ 
Sbjct: 424 EDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRM 483

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
            ++ E   +  ++    + P+ + Y++LI  +CK+G +++    + ++ +RGL  + V+ 
Sbjct: 484 AKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIH 543

Query: 427 SLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + L++     G++ +A  F     RM +  +   FN ++D  C          ++  M  
Sbjct: 544 NALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVR 603

Query: 482 YNIKPDVITHTVLIR-----------------------------------GIASQGSLSS 506
           Y   P+V T+  L+R                                   GI   G+L  
Sbjct: 604 YGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDE 663

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A+ L  +M+K    PD+ TY+ ++ G  +   I   L + ++M   GV PD   Y  LLN
Sbjct: 664 ALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLN 723

Query: 567 MLIKECNLDAALKLFGQ-LTDRGLEPDIITYNTIICGY 603
            LI E  + AA  +F + +   GL  D I YN+++ GY
Sbjct: 724 GLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGY 761



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 206/448 (45%), Gaps = 37/448 (8%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ L+  + R GKI  ++ I   M + G+   PD V                        
Sbjct: 683  YTILLSGFCRKGKILPALVILQMMLEKGVV--PDTV------------------------ 716

Query: 175  GKGFCVYEFLMNGLLRKGVIENAFHMHRQVI-QRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L+NGL+ +G ++ A ++  ++I + G   + +  N ++     +  +    
Sbjct: 717  -----AYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIK 771

Query: 234  SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             +   +      PN  +++ L++ + K  +  K+  LY  M+   + PD + Y +LI GL
Sbjct: 772  RMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGL 831

Query: 294  FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
             + G +    + L   +  G+  D +VF  ++ A+     +  A+Q ++ M      P+ 
Sbjct: 832  SECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSS 891

Query: 354  ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
             ++S +I GL ++G L  +  +  ++L   L+P+   Y +L++  C+ G++   F L + 
Sbjct: 892  KTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEE 951

Query: 414  MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            M   G+ P  V  S +I GL     + +A+  F   +R  ++P +  F TLM   C+  +
Sbjct: 952  MKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESK 1011

Query: 469  ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
              D + L  LM +  ++ DV+++ VLI G+     +S A+ L+ +M  +GL P++ TY  
Sbjct: 1012 IADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYIT 1071

Query: 529  IIHGLFKGKNISVGLHMFKLMERNGVAP 556
            +   ++    +  G  + + +E  G+ P
Sbjct: 1072 LTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 158/356 (44%), Gaps = 25/356 (7%)

Query: 3    LKFKNLLTVWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKW-THNC 61
            LK +N+ T+ R ++  Y +E   + +       N ++   +K    + ++  +K+     
Sbjct: 762  LKSRNVNTIKRMMSDMYQNEVYPNSASY-----NILMHGYVKRGQFSKSLYLYKYMVRKG 816

Query: 62   VSSPNIAQ--LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLI 119
            +   N+    LI  L +  + D+A    +KMV++         +F D L      +  LI
Sbjct: 817  IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLE--------GIFPDRLV-----FDILI 863

Query: 120  ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF- 178
              +    K+  ++++F  M  + +  S      +++ L+    +   +K+   M   G  
Sbjct: 864  TAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQ 923

Query: 179  ---CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                 Y  L+N   R G I+ AF +  ++   G VP  V  + I++ LC  G++  A  +
Sbjct: 924  PNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIV 983

Query: 236  FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
            F  ++  G  P V TF+TL+++ CKE+K+  A  L  LM    L  D++ Y++LI GL K
Sbjct: 984  FSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCK 1043

Query: 296  AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
               + +  +L      +GL  ++  + ++  A    G V    +  + +   G +P
Sbjct: 1044 DKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 7/301 (2%)

Query: 93   QFGKTYNFFR-LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
            QF K+   ++ + R  +      Y  LI      G ID +V+    M   GI+    +  
Sbjct: 801  QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFD 860

Query: 152  RLMSCLVDSNSVGQYYKLCRAMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
             L++   + + +    ++   M+          +  ++NGL+RKG ++++  +  +++Q 
Sbjct: 861  ILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQV 920

Query: 208  GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
            G  PN      ++   C  G+I  A  L + +  +G  P  V  S++I   C+  KLE+A
Sbjct: 921  GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEA 980

Query: 268  FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL-LLTALDRGLKLDVVVFSSVMD 326
              +++ MM   +VP +  ++ L+  L K  ++ +   L  L  L R L++DVV ++ ++ 
Sbjct: 981  VIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCR-LRVDVVSYNVLIT 1039

Query: 327  AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                   +  A+  Y  M + G  PN+ +Y  L   +   GR+     L   +  R L P
Sbjct: 1040 GLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099

Query: 387  S 387
            +
Sbjct: 1100 A 1100


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 198/402 (49%), Gaps = 5/402 (1%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  PN+ T N ++  LC         S+  ++  +G +P++VTF+T++N  C E  + +A
Sbjct: 108 GVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQA 167

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +  + + +M    D      +I+GL K G        L    ++   LDV  +++V+D 
Sbjct: 168 IRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDG 227

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G V  A   + +M   G  P++ +Y+ LI GLC   R  EA  L   ++ + + P 
Sbjct: 228 LCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 287

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
           + T++ +   F K+G +    S++  M   G++ D V  S +I        M DA+  F 
Sbjct: 288 VQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFD 347

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             +R   +PN+  + +L+ G C +K     +     M    + P+++T   LI G    G
Sbjct: 348 LMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAG 407

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
              +A  LFF M K G  PD+ T + I+ GLFK    S  + +F+ +E+     DI IY+
Sbjct: 408 KPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYS 467

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           ++LN +     L+ AL+LF  L+ +G++ D++TYN +I G C
Sbjct: 468 IILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLC 509



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 199/388 (51%), Gaps = 5/388 (1%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++NGL + G    A    +++ ++    ++   N ++  LC +G +  A  LF  +   G
Sbjct: 189 IINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKG 248

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +P++ T++ LI+  C   + ++A  L   MM   ++PD+  ++++     K G +    
Sbjct: 249 IQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAK 308

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +       G++ DVV +SS++  +  +  +  A++ +D M+  G LPN+++Y+ LI G 
Sbjct: 309 SIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGW 368

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+   + +A    G+++   L+P+++T+++LI GFCK+GK      L+  M K G  PD 
Sbjct: 369 CEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDL 428

Query: 424 VVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
             C+++++GL       +A+  F +  +M    ++ I++ +++G C   +  D ++LF  
Sbjct: 429 QTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSY 488

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           +    +K DV+T+ ++I G+  +G L  A  L  +M + G  PD  TY+  + GL +   
Sbjct: 489 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYE 548

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           IS        M+  G   +     +L+N
Sbjct: 549 ISKSTKYLMFMKGKGFRANATTTKLLIN 576



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 168/373 (45%), Gaps = 30/373 (8%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A   +  ++ + P P V  F+ L     K      A  L   M  + + P++  ++I+I+
Sbjct: 62  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVIN 121

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L +      G  +L      G++  +V F+++++     G+V +A++  D + + G+  
Sbjct: 122 CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYES 181

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  +   +I GLC+ G    A     ++  +     +  Y++++DG CK G + + + L+
Sbjct: 182 DRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLF 241

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
             M  +G++PD                              LF +N L+ G C   R  +
Sbjct: 242 SQMTGKGIQPD------------------------------LFTYNCLIHGLCNFDRWKE 271

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
              L   M    I PDV T  V+       G +S A  +F  M   G+  DV+TYS+II 
Sbjct: 272 AAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIG 331

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
                  +   + +F LM R G  P+I  Y  L++   +  N++ A+   G++ + GL+P
Sbjct: 332 VHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDP 391

Query: 592 DIITYNTIICGYC 604
           +I+T+NT+I G+C
Sbjct: 392 NIVTWNTLIGGFC 404



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 191/424 (45%), Gaps = 15/424 (3%)

Query: 104 FRDSLGDFGCDYS-----FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
           F D L D G +        +I    ++G    ++     M +    L       ++  L 
Sbjct: 170 FVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLC 229

Query: 159 DSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
               V + + L   M GKG       Y  L++GL      + A  +   ++++G +P++ 
Sbjct: 230 KDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQ 289

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N I  R    G I  A S+F  +  +G + +VVT+S++I   C   +++ A ++++LM
Sbjct: 290 TFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLM 349

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +    +P+++ Y+ LI G  +   + +    L   ++ GL  ++V +++++  +   G  
Sbjct: 350 IRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKP 409

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             A + +  M   G LP++ + +I++ GL +     EA  LF ++     +  ++ YS +
Sbjct: 410 VAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSII 469

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTL 449
           ++G C SGKL D   L+  +  +G+K D V  +++IN     GL+ DA     +      
Sbjct: 470 LNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGC 529

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            P+   +N  + G  R    + + K  M M     + +  T  +LI   ++    + A  
Sbjct: 530 PPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANKE-NRAFQ 588

Query: 510 LFFQ 513
           +F Q
Sbjct: 589 VFLQ 592



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 132/277 (47%), Gaps = 5/277 (1%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PNV +++I+I  LC+    V    + G +    +EPS++T++++++G C  G +   
Sbjct: 108 GVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQA 167

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
               D++   G + D      +INGL        AL +  +        ++  +N ++DG
Sbjct: 168 IRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDG 227

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+     +   LF  M    I+PD+ T+  LI G+ +      A  L   M+++G+ PD
Sbjct: 228 LCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 287

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           V T++ I     K   IS    +F  M   G+  D+  Y+ ++ +      +  A+++F 
Sbjct: 288 VQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFD 347

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            +  +G  P+I+TY ++I G+C + +     YF  ++
Sbjct: 348 LMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEM 384


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 220/490 (44%), Gaps = 72/490 (14%)

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           +K + E       ++I++GF+P++  CN +LK L  +  +  AS++++ ++  G  P V+
Sbjct: 217 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 276

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           TF+T++++  K   LE+  +++  M   ++    + Y+ILI+G  K G+++E        
Sbjct: 277 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 336

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL------------------- 350
              G  +    F+ +++ Y   G    A    D MLN G                     
Sbjct: 337 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 396

Query: 351 ------------PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
                       P+V+SY+ L+ G  + G+ VEA  LF  +    + PS++TY++LIDG 
Sbjct: 397 DDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 456

Query: 399 CKSGKLR-------------------------DGF----------SLYDNMIKRGLKPDA 423
           C+SG L                           GF           +YD M+++G+KPD 
Sbjct: 457 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 516

Query: 424 VVCSLLING--LMGDALRFFFQSVRMTLI----PNLFIFNTLMDGCCRLKRATDTVKLFM 477
              +    G   +GD+ + F     M       P+L I+N  +DG C++      ++   
Sbjct: 517 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 576

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            +    + PD +T+T +IRG    G    A  L+ +ML++ L P VITY  +I+G  K  
Sbjct: 577 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 636

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +         M++ GV P++  +N LL  + K  N+D A +   ++ + G+ P+  +Y 
Sbjct: 637 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 696

Query: 598 TIICGYCSLN 607
            +I   C   
Sbjct: 697 MLISKNCDFE 706



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 198/431 (45%), Gaps = 14/431 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + + GK++E+      M   G  ++P     L+            + +   M 
Sbjct: 313 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 372

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y   +  L   G I++A    R+++     P++V+ N ++      G+  
Sbjct: 373 NAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFV 428

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            AS LFD L      P++VT++TLI+  C+   LE A +L   M    + PD+I Y+ L+
Sbjct: 429 EASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 488

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML-NGGF 349
            G  K G L    E+    L +G+K D   +++     + +GD  +A + ++ M+     
Sbjct: 489 KGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH 548

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P++  Y++ I GLC+ G LV+A     ++    L P  +TY+++I G+ ++G+ +   +
Sbjct: 549 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 608

Query: 410 LYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           LYD M+++ L P  +   +LI      G +  A ++  +  +  + PN+   N L+ G C
Sbjct: 609 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC 668

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +     +  +    M    I P+  ++T+LI            + L+ +ML + + PD  
Sbjct: 669 KAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGY 728

Query: 525 TYSAIIHGLFK 535
           T+ A+   L K
Sbjct: 729 THRALFKHLEK 739



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 179/369 (48%), Gaps = 12/369 (3%)

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           + K++  EK    +  M+    +P +   +I++  L  +  + + + +  T ++ G+   
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           V+ F++++D+    GD+ R  + +  M       + ++Y+ILI G  + G++ EA    G
Sbjct: 275 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 334

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-----DAVVCSLLING 432
            +       +  +++ LI+G+CK G   D + + D M+  G+ P     +  +C+L   G
Sbjct: 335 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 394

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            + DA R    S+     P++  +NTLM G  ++ +  +   LF  +   +I P ++T+ 
Sbjct: 395 RIDDA-RELLSSM---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 450

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G+   G+L  A  L  +M  + + PDVITY+ ++ G  K  N+S+   ++  M R 
Sbjct: 451 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 510

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQL--TDRGLEPDIITYNTIICGYCSLNSCL 610
           G+ PD   Y       ++  + D A +L  ++  TD    PD+  YN  I G C + + +
Sbjct: 511 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA-PDLTIYNVRIDGLCKVGNLV 569

Query: 611 IDGYFKSQI 619
               F+ +I
Sbjct: 570 KAIEFQRKI 578



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/484 (22%), Positives = 189/484 (39%), Gaps = 80/484 (16%)

Query: 33  NQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV--ASHVFDKM 90
           N+A+A+   +I+       I F     +C  + ++ ++  + L+   R++  +   ++ +
Sbjct: 257 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 316

Query: 91  VIQFGKTYNF--FRLFRDSLGDFG---CDYSF--LIENYVRIGKIDESVEIFAYMSDMGI 143
           +  F K       R F   +   G     YSF  LIE Y + G  D++  +   M + GI
Sbjct: 317 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 376

Query: 144 YLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQ 203
           Y +       +  L D   +    +L  +M       Y  LM+G ++ G    A  +   
Sbjct: 377 YPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDD 436

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +      P+IVT N ++  LC +G +  A  L + +      P+V+T++TL+  F K   
Sbjct: 437 LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGN 496

Query: 264 L-----------------------------------EKAFQLYNLMMEMDL-VPDLIIYS 287
           L                                   +KAF+L+  M+  D   PDL IY+
Sbjct: 497 LSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYN 556

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
           + IDGL K G L +  E        GL  D V +++V+  Y+  G    A   YD ML  
Sbjct: 557 VRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 616

Query: 348 -----------------------------------GFLPNVISYSILIKGLCQQGRLVEA 372
                                              G  PNV++++ L+ G+C+ G + EA
Sbjct: 617 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 676

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
                ++    + P+  +Y+ LI   C   K  +   LY  M+ + ++PD      L   
Sbjct: 677 YRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKH 736

Query: 433 LMGD 436
           L  D
Sbjct: 737 LEKD 740


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 204/408 (50%), Gaps = 7/408 (1%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +++ G   +  TC  +++ LC+ G++     L +     G  P  V ++ LI+ +C+   
Sbjct: 73  LVREGGADDYSTC-VMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGD 131

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           + +   L   M    ++P ++ Y  +I  L + G L +   LL     RGL  +V ++++
Sbjct: 132 IGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNT 191

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           V++A        +A    ++M+   F P+V++++ +I G C++G + EA  L  + + R 
Sbjct: 192 VINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRG 251

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDAL 438
           LEP+ L+Y+ LI GFC  G+      L   M+ RG  PD     A++  L+++G + DAL
Sbjct: 252 LEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDAL 311

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
               +     ++P+  I+N L+ G C+ +  +    L   M    ++PD   +T LI G 
Sbjct: 312 IVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGF 371

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                LS A  + F+ ++    PD++ Y+ +I G  K   +   +     M + G  PD 
Sbjct: 372 VRSDKLSDARKI-FEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDE 430

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
             Y  L++   K+ ++ A+L+L   +  R  +P+I TY ++ICGYC++
Sbjct: 431 FTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNI 478



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 235/513 (45%), Gaps = 52/513 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ Y R G I   + +   M   GI   P +V                        
Sbjct: 119 YNVLIDGYCRRGDIGRGLLLLGEMETKGII--PTVV------------------------ 152

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  +++ L RKG +     +  ++  RG  PN+   N ++  LC       AS 
Sbjct: 153 -----TYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASD 207

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           + + ++     P+VVTF+T+I  FC+E  + +A +L    +   L P+ + Y+ LI G  
Sbjct: 208 MLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFC 267

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
             G     ++LL+  + RG   D++   +++   V  G V  A+   ++M     +P+  
Sbjct: 268 VRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDAN 327

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
            Y++LI GLC++  L  A  L  ++L ++++P    Y++LIDGF +S KL D   +++ M
Sbjct: 328 IYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFM 387

Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
            ++   PD V  +++I      G+M +A+       +   IP+ F + TL+DG  +    
Sbjct: 388 EEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDI 446

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
           + +++L   M     KP++ T+  LI G  + G   SA  LF +M   GL P+V+ Y+ +
Sbjct: 447 SASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVL 506

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI--------------KECNLD 575
           I  LFK   +      F+ M  N   P+ A  + L+N L+              K+ +  
Sbjct: 507 IGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEK 566

Query: 576 AA-LKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +A L +F  L   GL+P I  YN II   C  N
Sbjct: 567 SALLDVFRGLISDGLDPRISAYNAIIFSLCRHN 599



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 168/345 (48%), Gaps = 6/345 (1%)

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           E+A  LY  M+  +   D     +++ GL   GR++EG  L+      G     V ++ +
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
           +D Y   GD+GR +     M   G +P V++Y  +I  L ++G L +   L G++  R L
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
            P++  Y+++I+  CK         + + M+K    PD V  + +I G      + +AL+
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              +++R  L PN   +  L+ G C    A     L + M      PD+IT   LI G+ 
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G ++ A+++  +M +R + PD   Y+ +I GL K + +S   ++ + M    V PD  
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKF 362

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           IY  L++  ++   L  A K+F  + ++   PDI+ YN +I GYC
Sbjct: 363 IYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYC 406



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 117/512 (22%), Positives = 225/512 (43%), Gaps = 54/512 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL------VQRLMSCLVDSNSVGQYYK 168
           Y  +I    R G + +   +   M   G  LSP++      +  L  C   S +     +
Sbjct: 154 YGAIIHWLGRKGDLTKVESLLGEMRARG--LSPNVQIYNTVINALCKCRSASQASDMLNQ 211

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + ++        +  ++ G  R+G +  A  + R+ I+RG  PN ++   ++   C+ G+
Sbjct: 212 MVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGE 271

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              AS L   ++  G  P+++T   LI+      ++  A  +   M E  ++PD  IY++
Sbjct: 272 AMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNV 331

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI GL K   L     LL   L++ ++ D  ++++++D +V    +  A + ++ M    
Sbjct: 332 LISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA 391

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++++Y+++IKG C+ G + EA      +      P   TY++L+DG+ K G +    
Sbjct: 392 -CPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASL 450

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L  +M+KR  K                              PN+F + +L+ G C +  
Sbjct: 451 RLLCDMMKRRCK------------------------------PNIFTYASLICGYCNIGD 480

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                 LF  M    + P+V+ +TVLI  +  +  +  A   F  ML     P+  T   
Sbjct: 481 TYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHY 540

Query: 529 IIHGLF---------------KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           +++GL                +    S  L +F+ +  +G+ P I+ YN ++  L +   
Sbjct: 541 LVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNM 600

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           L  A+ L  +++++G  PD IT+ +++ G+ S
Sbjct: 601 LGKAMDLKDKMSNKGCLPDPITFLSLLYGFSS 632



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 152/340 (44%), Gaps = 21/340 (6%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++GL+  G + +A  +  ++ +R  +P+    N ++  LC    +  A +L + +L   
Sbjct: 297 LIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQK 356

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +P+   ++TLI+ F +  KL  A +++  M E    PD++ Y+++I G  K G +KE  
Sbjct: 357 VQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEE-KACPDIVAYNVMIKGYCKFGMMKEAV 415

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
             + +    G   D   +++++D Y   GD+  +++    M+     PN+ +Y+ LI G 
Sbjct: 416 TCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGY 475

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C  G    A  LF ++    L P+++ Y+ LI    K  K+    + +++M+     P+ 
Sbjct: 476 CNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPND 535

Query: 424 VVCSLLINGLMG-------------------DALRFFFQS-VRMTLIPNLFIFNTLMDGC 463
                L+NGL+                     AL   F+  +   L P +  +N ++   
Sbjct: 536 ATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSL 595

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
           CR       + L   M      PD IT   L+ G +S G 
Sbjct: 596 CRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGE 635



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 30/240 (12%)

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A GL+G++L+R       +   ++ G C  G++ +G  L +     G  P AV       
Sbjct: 65  ARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAV------- 117

Query: 432 GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
                                   +N L+DG CR       + L   M    I P V+T+
Sbjct: 118 -----------------------FYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTY 154

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
             +I  +  +G L+    L  +M  RGL+P+V  Y+ +I+ L K ++ S    M   M +
Sbjct: 155 GAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVK 214

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLI 611
           +   PD+  +N ++    +E ++  ALKL  +   RGLEP+ ++Y  +I G+C     ++
Sbjct: 215 SRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMV 274



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 146/342 (42%), Gaps = 46/342 (13%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LI  L +  M   A ++ ++M+ Q  +   F              Y+ LI+ +VR  K+ 
Sbjct: 332 LISGLCKKRMLSAAKNLLEEMLEQKVQPDKFI-------------YTTLIDGFVRSDKLS 378

Query: 130 ESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF---- 183
           ++ +IF +M +      PD+V    ++        + +      +MR  G    EF    
Sbjct: 379 DARKIFEFMEEKAC---PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTT 435

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L++G  +KG I  +  +   +++R   PNI T   ++   C  G   +A  LF  +   G
Sbjct: 436 LVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEG 495

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF--KAGRLKE 301
             PNVV ++ LI +  K+ K+ +A   +  M+     P+      L++GL   + G +  
Sbjct: 496 LFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNS 555

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
                  A ++         S+++D + G             +++ G  P + +Y+ +I 
Sbjct: 556 NRSDTKQAHEK---------SALLDVFRG-------------LISDGLDPRISAYNAIIF 593

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
            LC+   L +A  L  ++  +   P  +T+ SL+ GF  +G+
Sbjct: 594 SLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGE 635


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/567 (24%), Positives = 254/567 (44%), Gaps = 55/567 (9%)

Query: 94  FGKTYNFFRLFRD--SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV- 150
            G T   F   RD  ++   G  Y+ +I+   ++GK+D+  +I + +   G+  S   V 
Sbjct: 209 LGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVP 268

Query: 151 -QRLMSCLVDSNSVGQYYKLCRAMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVI 205
              LM  L  S  V +  +L   M           +  L+NGL R         + R++ 
Sbjct: 269 YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREME 328

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
             G  PN V CN+++   C  G    A  LFD ++    K   VT++ +  A CKE ++E
Sbjct: 329 GLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEME 388

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLF-KAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           +A ++   M+   +     +++ ++ GL  + GRL+    L+   + RG+K +  + ++ 
Sbjct: 389 RAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTAC 448

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
                       AV  + +ML  G   N+ + + LI GLC+   +  A  +   ++ + +
Sbjct: 449 TKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGM 508

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALR 439
           E   +TY+ +I G CK  K+ +   L D+MI++G KPDA + + +I+     G M +AL 
Sbjct: 509 ELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALH 568

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLK---RATDTVKLFMLMGMYNIKPDVITHTVLIR 496
              Q     + P++  + T++DG C+ K   +A + +   M  G+   KP+ + +  LI 
Sbjct: 569 LLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGL---KPNAVIYNALIG 625

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH------------------------- 531
           G    G++S AI +   M   G+ P  +TY +++H                         
Sbjct: 626 GYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEV 685

Query: 532 ----------GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
                     GL K   +   ++ F+ M    + P+   Y  L+    K  N + A KLF
Sbjct: 686 GVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLF 745

Query: 582 GQLTDRGLEPDIITYNTIICGYCSLNS 608
            ++   G+ PD ++YNT++ G+  ++S
Sbjct: 746 DEMVSSGIVPDNVSYNTLVTGFSQVDS 772



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/604 (22%), Positives = 263/604 (43%), Gaps = 70/604 (11%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVS-SPNIAQLIHVLLQSDMRDVASHVFDKMVIQF 94
           NA+L  L +T N     + F    +C + +PN      ++              K + + 
Sbjct: 197 NALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMI--------------KALCKV 242

Query: 95  GKTYNFFRLFRD--------SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLS 146
           GK  + F++  D        S G     Y+ L++   + G++DE++ +   M +  +  S
Sbjct: 243 GKVDDGFKILSDLIHAGLQQSAG--AVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPS 300

Query: 147 PDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL----RKGVIENAFHMHR 202
                 L++ L  S+  G+   L R M G G    E + N L+    RKG    A  +  
Sbjct: 301 MVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFD 360

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP------------------ 244
           +++ +      VT N I + LC  G++  A  + + +L  G                   
Sbjct: 361 EMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRT 420

Query: 245 ------------------KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
                             KPN    +      C+  + ++A  ++  M+E  L  ++   
Sbjct: 421 GRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATS 480

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           + LI GL +   +K   E+L T +++G++LD + ++ ++        +  A++  D M+ 
Sbjct: 481 NALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIR 540

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            GF P+   ++ +I   C  G++ EA  L GQ+ I  ++P +++Y ++IDG+CK+  ++ 
Sbjct: 541 KGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQK 600

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
                + ++  GLKP+AV+ + LI     NG +  A+        + + P    + +LM 
Sbjct: 601 ANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMH 660

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C      +   +F      +I+  V+ +T++I+G+   G +  A+  F +M  R + P
Sbjct: 661 WMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPP 720

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           + ITY+ +++   K  N      +F  M  +G+ PD   YN L+    +  +LD A++  
Sbjct: 721 NKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKA 780

Query: 582 GQLT 585
            +++
Sbjct: 781 AEIS 784



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 202/427 (47%), Gaps = 14/427 (3%)

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-K 245
           G LR  V  +AFH+   +  R   P++ TCN +L+ L   G +G    +FD +       
Sbjct: 172 GSLRLAV--DAFHV---LSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVT 226

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL--VPDLIIYSILIDGLFKAGRLKEGN 303
           PN  +++++I A CK  K++  F++ + ++   L      + Y++L+D L K+GR+ E  
Sbjct: 227 PNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAI 286

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L     +  +   +V F  +++        G        M   G  PN +  + LI   
Sbjct: 287 RLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWH 346

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-- 421
           C++G   EA  LF +++ + ++ + +TY+ +    CK G++     + + M+  G+    
Sbjct: 347 CRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHS 406

Query: 422 ---DAVVCSLLI-NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
              ++VV  LL   G +   +R   + V+  + PN  +        C+ +R  + V +++
Sbjct: 407 GLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWL 466

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    +  ++ T   LI G+    ++  A  +   M+ +G+  D ITY+ +I G  K  
Sbjct: 467 KMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDS 526

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I   L +   M R G  PD  ++N +++       ++ AL L GQ+   G++PD+++Y 
Sbjct: 527 KIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYG 586

Query: 598 TIICGYC 604
           TII GYC
Sbjct: 587 TIIDGYC 593



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 219/463 (47%), Gaps = 19/463 (4%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI+ + R G   E++ +F  M    +  +      +   L     + +  ++   M   G
Sbjct: 342 LIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTG 401

Query: 178 FCVYEFLMN----GLL-RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
             ++  L N    GLL R G +E+   +  ++++RG  PN        K+LC   +   A
Sbjct: 402 MTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEA 461

Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
             ++  +L  G   N+ T + LI+  C+   ++ A ++   M+   +  D I Y+I+I G
Sbjct: 462 VGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQG 521

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
             K  +++E  +L    + +G K D  +F+S++ AY  +G +  A+    +M   G  P+
Sbjct: 522 CCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPD 581

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V+SY  +I G C+   + +A     +++   L+P+ + Y++LI G+ ++G +     + D
Sbjct: 582 VVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLD 641

Query: 413 NMIKRGLKPDAVV-CSLL----INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M   G++P  V  CSL+      GL+ +A   F QS + ++   +  +  ++ G C++ 
Sbjct: 642 TMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIG 701

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  + +  F  M   +I P+ IT+T L+      G+   A  LF +M+  G+ PD ++Y+
Sbjct: 702 KMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYN 761

Query: 528 AIIHGLFK----GKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
            ++ G  +     K I     +  +M +N       + NVL+N
Sbjct: 762 TLVTGFSQVDSLDKAIEKAAEISSIMTQNDC-----LDNVLVN 799



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/353 (21%), Positives = 126/353 (35%), Gaps = 114/353 (32%)

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLT----------------------------------- 390
           +G L  A   F  +  RR  PS+ T                                   
Sbjct: 171 RGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGY 230

Query: 391 -YSSLIDGFCKSGKLRDGFSLYDNMIKRGLK----------------------------- 420
            Y+S+I   CK GK+ DGF +  ++I  GL+                             
Sbjct: 231 SYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKG 290

Query: 421 --------PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
                   P  V   +LINGL      G+      +   + + PN  I N L+D  CR  
Sbjct: 291 RMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKG 350

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS------------------------ 503
             T+ ++LF  M    +K   +T+ ++ R +  +G                         
Sbjct: 351 HFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFN 410

Query: 504 ------------LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
                       L S + L  +M+KRG+ P+    +A    L +G+     + ++  M  
Sbjct: 411 SVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLE 470

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            G+  +IA  N L++ L +  N+  A ++   + ++G+E D ITYN +I G C
Sbjct: 471 KGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCC 523


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 238/516 (46%), Gaps = 33/516 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I+   + GK+D   E+ A +   G+  +      LM  L  S  V + ++L   M 
Sbjct: 14  YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 73

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       +  L+NGL R         + +++ Q G  PN V  N+++   C  G   
Sbjct: 74  QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 133

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LFD ++L   KP  VT++ +  A CKE ++E+A ++   M+ + +     +++ ++
Sbjct: 134 QALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVV 193

Query: 291 DGLFKAGRLKEG---------------NELLLTALDRGL------KLDVVVFSSVMDAYV 329
             L +  R  E                N+ L+TA  R L      +  V ++   ++   
Sbjct: 194 AWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGK 253

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            + +  + +QT   MLN G   + I+Y+I+I+G C+  ++ EA  L G +  R  +P L 
Sbjct: 254 YMKEATKVIQT---MLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLF 310

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           T+++L+  +C  GK+ + F L D M   GL+PD V    +I+G      +  A  +  + 
Sbjct: 311 TFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTEL 370

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           +   L PN+FI+N L+ G  R    +  +     M    I+P  +T+  L+  +   G +
Sbjct: 371 MDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLV 430

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  +F Q  +  +   VI Y+ +I G  K   +   +  F+ M   G++P+   Y  L
Sbjct: 431 EEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTL 490

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           +    K  N + A KLF ++   G+ PD ITY T+I
Sbjct: 491 MYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 208/458 (45%), Gaps = 58/458 (12%)

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           R    N  +   ++K LC  G++     +   L   G +P VVT++ L++A CK  ++E+
Sbjct: 5   RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEE 64

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           AF+L   M +  + P ++ + ILI+GL +  R  E   +L      G+  + V+++ ++ 
Sbjct: 65  AFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIG 124

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA-------------- 372
            +   G   +A++ +D M+     P  ++Y+++ K LC++G +  A              
Sbjct: 125 WHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTV 184

Query: 373 -CGLFGQVL------IRRLE---------------PSLLTYSSLIDGFCKSGKLRDGFSL 410
            CGLF  V+       RRLE               P+    ++ +   CK GK ++   +
Sbjct: 185 HCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGI 244

Query: 411 Y-----------------DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           +                   M+ +G++ D++  +++I G      M +A++      R  
Sbjct: 245 WFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG 304

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
             P+LF FNTL+   C L +  +T  L   M    ++PD++++  +I G      +  A 
Sbjct: 305 FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAK 364

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
               +++ RGL P+V  Y+A+I G  +  +IS  +   + M+ NG+ P    Y  L+  +
Sbjct: 365 EYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWM 424

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
                ++ A  +F Q  +  ++  +I Y  +I GYC L
Sbjct: 425 CHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKL 462



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 151/281 (53%), Gaps = 6/281 (2%)

Query: 189 LRKG-VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
           L KG  ++ A  + + ++ +G   + +T N +++  C + ++  A  L   +   G KP+
Sbjct: 249 LNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPD 308

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           + TF+TL++A+C   K+E+ F L + M    L PD++ Y  +IDG  KA  +++  E L 
Sbjct: 309 LFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLT 368

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             +DRGLK +V ++++++  Y   GD+  A+   + M + G  P  ++Y  L+  +C  G
Sbjct: 369 ELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAG 428

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
            + EA  +F Q     ++  ++ Y+ +I G+CK GK+ +  + ++ M  RG+ P+ +  +
Sbjct: 429 LVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYT 488

Query: 428 LLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+     +G   +A + F + V   +IP+   + TL+  C
Sbjct: 489 TLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARC 529



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 120/259 (46%), Gaps = 8/259 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I    +  K++E++++   M+  G    PDL     L+    +   + + + L   
Sbjct: 277 YNIMIRGCCKDSKMEEAIKLHGDMTRRG--FKPDLFTFNTLLHAYCNLGKMEETFHLLDQ 334

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+ +G       Y  +++G  +   I  A     +++ RG  PN+   N ++     NG 
Sbjct: 335 MKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGD 394

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A    + +   G +P  VT+ +L+   C    +E+A  +++   E ++   +I Y+I
Sbjct: 395 ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTI 454

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I G  K G++ E          RG+  + + ++++M AY   G+   A + +D M+  G
Sbjct: 455 MIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG 514

Query: 349 FLPNVISYSILIKGLCQQG 367
            +P+ I+Y  LI    ++G
Sbjct: 515 VIPDNITYGTLIARCSEKG 533


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 240/502 (47%), Gaps = 10/502 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY----KLC 170
           Y+  I  Y + GKIDE+V +F  M + G+  +      L+  L  S  + +      ++ 
Sbjct: 244 YATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMV 303

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L+NGL++    + A  +  ++  +GF PN    N ++      G + 
Sbjct: 304 ENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMD 363

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  + D + L G KPN VT +TL+  FC+  ++E+A Q+   ++   L  +    S ++
Sbjct: 364 DALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVL 423

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-GF 349
             L K+ +     +++   L R +K++  + + ++      G    A+  + R+ +  G 
Sbjct: 424 HLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGL 483

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
             N  + + L+ GLC++G + E   +  +++ R L    ++Y++LI G CKSGK+ + F 
Sbjct: 484 AANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFK 543

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           L + M+K+G KPD    + L+ GL     M D  R   ++    ++PN++ +  +++G C
Sbjct: 544 LKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYC 603

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
              R  + V LF  +    ++   + + +LI   +  G+ + A  L   M    + P + 
Sbjct: 604 NADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIF 663

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TYS+IIHG+     +     +F+ M   G+ P++  Y  L+    K   +D    +  ++
Sbjct: 664 TYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEM 723

Query: 585 TDRGLEPDIITYNTIICGYCSL 606
           T   ++P+ ITY  +I GYC +
Sbjct: 724 TSNCIQPNKITYTIMIDGYCKM 745



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 211/416 (50%), Gaps = 8/416 (1%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF        +G  P++ +CN ++  L  + ++  +  +FD +   G   +V T++T IN
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAIN 249

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
           A+CK  K+++A  L+  M E  ++P+++ Y+ LIDGL K+GRL+E        ++  +  
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
            +V +  +++  V       A      M + GF PN   ++ LI G  ++G + +A  + 
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
             + ++ L+P+ +T+++L+ GFC++ ++     + + ++   L  +   CS +++ L+  
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLH-LLCK 428

Query: 437 ALRF--FFQSVRMTLIPNLFIFNTLMD----GCCRLKRATDTVKL-FMLMGMYNIKPDVI 489
           + +F    + V+  L+ N+ + ++L+     G C+  +  + + L F L     +  +  
Sbjct: 429 SSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTT 488

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T   L+ G+  +G++     +  +M++RGL  D I+Y+ +I G  K   I     + + M
Sbjct: 489 TSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKM 548

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            + G  PD   YN L+  L  +  +D   ++  +  D G+ P+I TY  ++ GYC+
Sbjct: 549 MKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCN 604



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/517 (24%), Positives = 233/517 (45%), Gaps = 15/517 (2%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  L   S G+       L   +  +G    + + F   +  G++ S      LMS LV 
Sbjct: 160 FLELGERSHGELDLLIYILCSQFQHLG-FHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVK 218

Query: 160 SNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
           SN + + +++  AM   G  +    Y   +N   + G I+ A  +  ++ + G +PN+VT
Sbjct: 219 SNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVT 278

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N ++  LC +G++  A      ++     P++VT+  L+N   K  K ++A  +   M 
Sbjct: 279 YNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMY 338

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
                P+  +++ LIDG  + G + +   +      +GLK + V  ++++  +     + 
Sbjct: 339 SKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQME 398

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR--RLEPSLLTYSS 393
           +A Q  + +L+     N  + S ++  LC+  +   A  +   +L+R  ++  SLLT   
Sbjct: 399 QAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTL-- 456

Query: 394 LIDGFCKSGKLRDGFSLYDNMI-KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM 447
           L+ G CK GK  +   L+  +  K+GL  +    + L+ GL     M +      + V  
Sbjct: 457 LVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVER 516

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            L+ +   +NTL+ GCC+  +  +  KL   M     KPD  T+  L++G+A +G +   
Sbjct: 517 GLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDV 576

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
             +  +    G+ P++ TY+ ++ G      I   + +F  +  N V     +YN+L+  
Sbjct: 577 GRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAA 636

Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             K  N   A KL   +    + P I TY++II G C
Sbjct: 637 HSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMC 673



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 217/515 (42%), Gaps = 90/515 (17%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI+   + G+++E++     M +  +  +P LV    L++ LV      +   +   
Sbjct: 279 YNNLIDGLCKSGRLEEALMFKGRMVENKV--NPSLVTYGILVNGLVKFEKFDEANSVLVE 336

Query: 173 MRGKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVT------------- 215
           M  KGF   EF+ N L+    RKG +++A  +   +  +G  PN VT             
Sbjct: 337 MYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQ 396

Query: 216 ----------------------CNKILKRLCINGQIGNASSLFDVLLL------------ 241
                                 C+ +L  LC + +  +A  +   LLL            
Sbjct: 397 MEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTL 456

Query: 242 ------------------------VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
                                    G   N  T + L+   C+   +E+ F +   M+E 
Sbjct: 457 LVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVER 516

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG---DV 334
            LV D I Y+ LI G  K+G+++E  +L    + +G K D   ++ +M      G   DV
Sbjct: 517 GLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDV 576

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
           GR +       + G +PN+ +Y+++++G C   R+  A  LF +++  ++E S + Y+ L
Sbjct: 577 GRVLH---EAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNIL 633

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTL 449
           I    K+G   + F L D M    + P     S +I+G     L+ +A   F +     L
Sbjct: 634 IAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGL 693

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
           +PN+F +  L+ G C+L +      +   M    I+P+ IT+T++I G    G+   A  
Sbjct: 694 MPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATK 753

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           L  +M+  G++PD +TY+ +  G  K   +   L 
Sbjct: 754 LLNEMIANGISPDTVTYTVLQKGYCKENELEETLQ 788



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 194/405 (47%), Gaps = 21/405 (5%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
           N +L    +TN    A Q  ++  + V S N    + ++H+L +S   D A  +   +++
Sbjct: 385 NTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLL 444

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM-GIYLSPDLVQ 151
           +  K         DSL       + L+    + GK  E+++++  ++D  G+  +     
Sbjct: 445 RNIKV-------NDSL------LTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSN 491

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQR 207
            L+  L +  ++ + + +C+ M  +G  +    Y  L+ G  + G IE AF +  +++++
Sbjct: 492 ALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQ 551

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           GF P+  T N ++K L   G++ +   +       G  PN+ T++ ++  +C   +++ A
Sbjct: 552 GFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNA 611

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L+N ++   +    ++Y+ILI    KAG   E  +L        +   +  +SS++  
Sbjct: 612 VSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHG 671

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                 V  A   ++ M N G +PNV  Y+ LI G C+ G++ +   +  ++    ++P+
Sbjct: 672 MCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPN 731

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            +TY+ +IDG+CK G  ++   L + MI  G+ PD V  ++L  G
Sbjct: 732 KITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKG 776



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 112/207 (54%), Gaps = 8/207 (3%)

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
           D F L+ +   +G+ P    C+ L++ L     +  + R F    R  ++ +++ + T +
Sbjct: 192 DTFMLFTS---KGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAI 248

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +  C+  +  + V LF+ MG   + P+V+T+  LI G+   G L  A++   +M++  + 
Sbjct: 249 NAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVN 308

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           P ++TY  +++GL K +       +   M   G +P+  ++N L++   ++ N+D AL++
Sbjct: 309 PSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRV 368

Query: 581 FGQLTDRGLEPDIITYNTIICGYCSLN 607
              +T +GL+P+ +T+NT++ G+C  N
Sbjct: 369 RDDMTLKGLKPNAVTHNTLLQGFCRTN 395


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 220/444 (49%), Gaps = 16/444 (3%)

Query: 168 KLCRAMRGKGFCVYE-FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           K C  MR    C+ E F   G L++ V E    MH Q    G VPN  T N I+K     
Sbjct: 133 KACEVMR----CMVESFSEVGRLKEAV-EMVIEMHNQ----GLVPNTRTLNWIIKVTSEM 183

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A  LF+ + + G +P+ +++  ++  +CK   + +A +  ++M+E   V D   +
Sbjct: 184 GLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATF 243

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +++I      G            +D GL+ +++ F+ +++     G + +A +  + M+ 
Sbjct: 244 TLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVG 303

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQ-VLIRRLEPSLLTYSSLIDGFCKSGKLR 405
            G+ PNV +++ LI GLC++G   +A  LF + V     +P++LTY+++I G+C+  KL 
Sbjct: 304 KGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLN 363

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMT---LIPNLFIFNTLM 460
               L   M ++GL P+    + LI+G    G+  R +     M+     PNL  +N ++
Sbjct: 364 RAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIV 423

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           +G C+  R  +  K+        +KPD  T+ +L+     Q ++  A+ LF +MLK G+ 
Sbjct: 424 NGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQ 483

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD+ +Y+ +I    +   +      F+   R G+ P    Y  ++    +E NL  A+K 
Sbjct: 484 PDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKF 543

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
           F +L+D G  PD ITY  II G C
Sbjct: 544 FHRLSDHGCAPDSITYGAIISGLC 567



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 132/547 (24%), Positives = 257/547 (46%), Gaps = 50/547 (9%)

Query: 75  LQSDMRDVASHVFDKMVIQFGKTYNFFRLF----------RDSLGDFGCD-YSFLIENYV 123
           L SD   + +  F    I + K  +F RL+          R+S  +  C+    ++E++ 
Sbjct: 89  LASDAGSMVTLSFFHWAIGYPKFRHFMRLYIVCAMSLIGNRNS--EKACEVMRCMVESFS 146

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
            +G++ E+VE+   M + G  L P+   R ++ ++   S                     
Sbjct: 147 EVGRLKEAVEMVIEMHNQG--LVPN--TRTLNWIIKVTS--------------------- 181

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
                   G++E A  +  ++  RG  P+ ++   ++   C  G I  A     V+L  G
Sbjct: 182 ------EMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERG 235

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
              +  TF+ +I+ F  +    +A   +  +++M L P+LI ++ +I+GL K G +K+  
Sbjct: 236 FVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAF 295

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-GFLPNVISYSILIKG 362
           E+L   + +G K +V   +S++D     G   +A + + +++      PNV++Y+ +I G
Sbjct: 296 EMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISG 355

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C++ +L  A  L  ++  + L P+  TY++LIDG CK+G     + L + M   G  P+
Sbjct: 356 YCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPN 415

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
               + ++NGL     + +A +      +  L P+ F +N LM   C+ +     + LF 
Sbjct: 416 LCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFN 475

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    I+PD+ ++T LI     +  +  + + F + ++ G+ P   TY+++I G  +  
Sbjct: 476 KMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREG 535

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           N+++ +  F  +  +G APD   Y  +++ L K+   D A  L+  + ++GL P  +T  
Sbjct: 536 NLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRI 595

Query: 598 TIICGYC 604
           T+   YC
Sbjct: 596 TLAYEYC 602



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 182/361 (50%), Gaps = 8/361 (2%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DR 312
           ++ +F +  +L++A ++   M    LVP+    + +I    + G L E  ELL   +  R
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMG-LVEYAELLFEEMCVR 199

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G++ D + +  ++  Y  IG++  A +    ML  GF+ +  +++++I     +G    A
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRA 259

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
              F +++   LEP+L+ ++ +I+G CK G ++  F + + M+ +G KP+    + LI+G
Sbjct: 260 LWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDG 319

Query: 433 L-----MGDALRFFFQSVRM-TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
           L        A R F + VR     PN+  +  ++ G CR  +      L   M    + P
Sbjct: 320 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 379

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +  T+T LI G    G+   A  L   M   G +P++ TY+AI++GL K   +     M 
Sbjct: 380 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKML 439

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +   +NG+ PD   YN+L++   K+ N+  AL LF ++   G++PDI +Y T+I  +C  
Sbjct: 440 EDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRE 499

Query: 607 N 607
           N
Sbjct: 500 N 500



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 115/221 (52%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++G  + G  E A+ +   +   GF PN+ T N I+  LC  G++  A  + +  
Sbjct: 383 TYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDG 442

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KP+  T++ L++  CK+  + +A  L+N M+++ + PD+  Y+ LI    +  R+
Sbjct: 443 FQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRM 502

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE       A+  G+      ++S++  Y   G++  A++ + R+ + G  P+ I+Y  +
Sbjct: 503 KESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAI 562

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           I GLC+Q +  EA  L+  ++ + L P  +T  +L   +CK
Sbjct: 563 ISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 7/146 (4%)

Query: 465 RLKRATDTVKLFMLMGMYN--IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           RLK A +     M++ M+N  + P+  T   +I+  +  G +  A LLF +M  RG+ PD
Sbjct: 150 RLKEAVE-----MVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPD 204

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            I+Y  ++    K  NI        +M   G   D A + ++++    +     AL  F 
Sbjct: 205 SISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFR 264

Query: 583 QLTDRGLEPDIITYNTIICGYCSLNS 608
           +L D GLEP++I +  +I G C   S
Sbjct: 265 RLVDMGLEPNLINFTCMIEGLCKRGS 290


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 219/460 (47%), Gaps = 44/460 (9%)

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
            L R G   +A  + R + + G VP+ V    ++  L   G +  A++L D +LL+G   
Sbjct: 189 ALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAA 248

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           +V TF+ ++   C    + +A +L + MM     P ++ Y  L+ GL +  +  E   +L
Sbjct: 249 DVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAML 308

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
                R  +++VV+ ++V+   +  G + RA + Y+ M + G  P+V +Y+IL+ GLC+ 
Sbjct: 309 ----GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKL 364

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC--------------------------- 399
           GR   A  +  ++  +   P+++TYS+L+  FC                           
Sbjct: 365 GRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGY 424

Query: 400 --------KSGKLRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVR 446
                   K GKL +   L   M  +G KPD      ++  L  N  M +A   F   + 
Sbjct: 425 NGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLE 484

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             ++ N   +NTL+       R  + ++L   M ++    DV+++  LI+ +  +G++  
Sbjct: 485 EGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDR 544

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           +++L  +M+ +G+ P+  +Y+ +I+ L K   +   L + K M   G+ PDI  YN L+N
Sbjct: 545 SMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLIN 604

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            L K     AAL L  +L +  + PDI+TYN +I  +C +
Sbjct: 605 GLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKV 644



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 134/552 (24%), Positives = 254/552 (46%), Gaps = 40/552 (7%)

Query: 83  ASHVFDKMVIQFG-----KTYN------------------FFRLFRDSLGDFGCDYSFLI 119
           A H+ D+M  +F      ++YN                  + R+ RD +      +    
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 120 ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC 179
               R+G+  +++ +   M+  G      L Q ++  LV    V +   L   M   G  
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 180 V----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                +  ++ GL   G +  A  +  +++  G  P++VT   +L+ LC   Q   A ++
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
              +    P+ NVV  +T+I     E KL +A +LY +M      PD+  Y+IL+ GL K
Sbjct: 308 LGRV----PEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCK 363

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV--GIGDVGRAVQTYDRMLNGGFLPNV 353
            GR      +L    ++G   ++V +S+++ ++   G+ D  RA+   D+M   GF  N 
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM--LDQMSAKGFSMNS 421

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
             Y+ +I  L + G+L EA  L  ++  +  +P + TY+++I   C + ++ +   ++ N
Sbjct: 422 QGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGN 481

Query: 414 MIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           +++ G+  + +  + LI+ L+      + LR   + V      ++  +N L+   C+   
Sbjct: 482 LLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGN 541

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
              ++ L   M    IKP+  ++ +LI  +   G +  A+ L  +ML +GLTPD++TY+ 
Sbjct: 542 VDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 601

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+GL K       L++ + +    V PDI  YN+L++   K   LD A  L  +    G
Sbjct: 602 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGG 661

Query: 589 LEPDIITYNTII 600
           + P+  T+  ++
Sbjct: 662 IVPNERTWGMMV 673



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 195/449 (43%), Gaps = 45/449 (10%)

Query: 197 AFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           A H+  Q+ +R    P+  + N +L  L       +A  L+  +L     P   TF    
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
            A C+  +   A  L   M     VPD ++Y  +I  L   G + E   LL   L  G  
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            DV  F+ V+    G+G V  A +  DRM+  G  P+V++Y  L++GLC+  +  EA  +
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
            G+V     E +++  +++I G    GKL     LY+ M  +G  PD    ++L++GL  
Sbjct: 308 LGRV----PEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCK 363

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR-----LKRA---------------- 469
               G A+R   +       PN+  ++TL+   CR       RA                
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG 423

Query: 470 --------------TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
                          + ++L   M     KPD+ T+  +I  + +   +  A  +F  +L
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           + G+  + ITY+ +IH L        GL +   M  +G   D+  YN L+  L KE N+D
Sbjct: 484 EEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVD 543

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            ++ L  ++  +G++P+  +YN +I   C
Sbjct: 544 RSMMLLEEMMTKGIKPNNFSYNMLINELC 572



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/505 (22%), Positives = 222/505 (43%), Gaps = 63/505 (12%)

Query: 59  HNCVSSPNIAQ-LIHVLLQSDMRDVASHVFDKMVIQ------------------FGKTYN 99
           H CV    + Q +IH L+       A+ + D+M++                    G    
Sbjct: 209 HGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVRE 268

Query: 100 FFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM 154
             RL  D +   GC      Y FL+    R  + DE+  +   + ++ + +   +++   
Sbjct: 269 AARLV-DRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIR--- 324

Query: 155 SCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
            CL +   + +  +L   M  KG       Y  LM+GL + G   +A  M  ++ ++G  
Sbjct: 325 GCLAEGK-LARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCA 383

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PNIVT + +L   C NG   +A ++ D +   G   N   ++ +I A  K+ KL++A +L
Sbjct: 384 PNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRL 443

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
              M      PD+  Y+ +I  L    ++ E   +    L+ G+  + + +++++ A + 
Sbjct: 444 VQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLH 503

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            G     ++  + M+  G   +V+SY+ LIK LC++G +  +  L  +++ + ++P+  +
Sbjct: 504 SGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFS 563

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI 450
           Y+ LI+  CK+GK+RD   L   M+ +GL PD V                          
Sbjct: 564 YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVT------------------------- 598

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
                +NTL++G C++      + L   +   N+ PD++T+ +LI        L  A +L
Sbjct: 599 -----YNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASML 653

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFK 535
             + +  G+ P+  T+  ++    +
Sbjct: 654 LDKAVSGGIVPNERTWGMMVQNFVR 678



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 37/240 (15%)

Query: 407 GFSLYDNMIKR-GLKP-----DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLM 460
              L D M +R  + P     +AV+ +L       DAL  + + +R  + P  F F    
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
              CRL RA D + L   M  +   PD + +  +I  + +QG ++ A  L  +ML  G  
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN------------------ 562
            DV T++ ++ GL    ++     +   M  +G  P +  Y                   
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 563 ---------VLLNMLIKEC----NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
                    V+LN +I+ C     L  A +L+  +  +G  PD+ TYN ++ G C L  C
Sbjct: 308 LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 227/448 (50%), Gaps = 11/448 (2%)

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR 190
           S+ +++ M  + + +S   +  L+S L  + +   +  + R         +  ++  L  
Sbjct: 436 SLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCS 495

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF-DVLLLVGPKPNVV 249
            G    A  + RQ+ +    PN VT N ++   C  G++  A  +  ++    G  PN  
Sbjct: 496 AGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQY 551

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMM-EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           T+ T+I+ +CK  ++++A ++++ M+ + ++ P+ ++Y+ LI G    G+L         
Sbjct: 552 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDR 611

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
            ++RG+ + V  ++ ++ A    G    A +  + M   G  P+V +Y+ILI G C++G 
Sbjct: 612 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 671

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           + +A  +F  +  R +  +++TY++LI    K G++++   L+D  ++RG++PD V+ + 
Sbjct: 672 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 731

Query: 429 LIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LIN     G +  A     +  +  + P+   +NTLM G C L R  +  KL   M    
Sbjct: 732 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 791

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           I+PD++T+  LI G + +G +  A+ +  +M+ +G  P ++TY+A+I GL K        
Sbjct: 792 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 851

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKE 571
           +M K M  NG+ PD + Y  L+  L  E
Sbjct: 852 NMVKEMVENGITPDDSTYISLIEGLTTE 879



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 201/406 (49%), Gaps = 11/406 (2%)

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T N +L+ LC  G+   A  L   +    P+PN VT++T+I  FC   +++ A  +   
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 539

Query: 274 MMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYVGI 331
           M E   + P+   Y  +I G  K GR+ E  ++    L +G +K + V++++++  Y   
Sbjct: 540 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G +  A+   DRM+  G    V +Y++L+  L   GR  EA  L  ++  + L P + TY
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 659

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVR 446
           + LI+G CK G ++    +++NM +RG++   V  + LI      G + +  + F ++VR
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             + P+L ++N L++            ++   M    I PD +T+  L+RG+   G +  
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L  +M +RG+ PD++TY+ +I G     ++   L +   M   G  P +  YN L+ 
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
            L K    D A  +  ++ + G+ PD  TY ++I G  + +   ID
Sbjct: 840 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAID 885



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 177/344 (51%), Gaps = 11/344 (3%)

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           AF L+  M  + L      ++I++  L  AG+     ELL     +  + + V +++V+ 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLR----QMPRPNAVTYNTVIA 522

Query: 327 AYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR-RL 384
            +   G V  A+     M   GG  PN  +Y  +I G C+ GR+ EA  +F ++L +  +
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALR 439
           +P  + Y++LI G+C  GKL       D M++RG+       +LL++ L  D     A  
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              +     L P++F +N L++G C+       +++F  M    ++  V+T+T LI  ++
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G +     LF + ++RG+ PD++ Y+A+I+      NI     +   ME+  +APD  
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 762

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            YN L+  L     +D A KL  ++T+RG++PD++TYNT+I GY
Sbjct: 763 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 806



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 195/405 (48%), Gaps = 39/405 (9%)

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           ++++ +K L  L +   +  A S    LLL      V   +T +  + +   L       
Sbjct: 395 SVLSADKALSPLAVLPHLDGAPSSLPNLLLTA-SAAVRPHATSLRLYSRMKSLSLPISTA 453

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           +L   +  +P    +++  D +F   RL+             L L    F+ ++      
Sbjct: 454 SLHPLLSALPSAPAFALFAD-MF---RLR-------------LPLCTTTFNIMLRHLCSA 496

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLLT 390
           G   RA++   +M      PN ++Y+ +I G C +GR+  A  +  ++  R  + P+  T
Sbjct: 497 GKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 552

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRG-LKPDAVVCSLLINGL-----MGDAL----RF 440
           Y ++I G+CK G++ +   ++D M+ +G +KP+AV+ + LI G      +  AL    R 
Sbjct: 553 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 612

Query: 441 FFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
             + V MT+   NL +    MDG     R T+  +L   MG   + PDV T+ +LI G  
Sbjct: 613 VERGVAMTVATYNLLVHALFMDG-----RGTEAYELVEEMGGKGLAPDVFTYNILINGHC 667

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G++  A+ +F  M +RG+   V+TY+A+I+ L K   +     +F    R G+ PD+ 
Sbjct: 668 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 727

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +YN L+N      N+D A ++ G++  + + PD +TYNT++ G C
Sbjct: 728 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 772



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 186/367 (50%), Gaps = 36/367 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I  + ++G++DE+V++F  M   G  + P+ V                        
Sbjct: 553 YGTVISGWCKVGRVDEAVKVFDEMLTKG-EVKPEAV------------------------ 587

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                +Y  L+ G   +G ++ A     ++++RG    + T N ++  L ++G+   A  
Sbjct: 588 -----MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G  P+V T++ LIN  CKE  ++KA +++  M    +   ++ Y+ LI  L 
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G+++E ++L   A+ RG++ D+V+++++++++   G++ RA +    M      P+ +
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 762

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ L++GLC  GR+ EA  L  ++  R ++P L+TY++LI G+   G ++D   + + M
Sbjct: 763 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 822

Query: 415 IKRGLKP-----DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG-CCRLKR 468
           + +G  P     +A++  L  NG   DA     + V   + P+   + +L++G     +R
Sbjct: 823 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 882

Query: 469 ATDTVKL 475
           A D  +L
Sbjct: 883 AIDDERL 889


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 199/425 (46%), Gaps = 30/425 (7%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++ GL R G   +A  +  +++  G  PN +T N ++      G +     L D +L
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQML 256

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             GPKPNVVT++ L++  C+  ++++   L + M    ++PD   YSIL DGL + G  +
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               L   +L +G+ L     S +++     G V +A Q ++ +++ G +P  + Y+ LI
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G CQ   L  A  +F Q+  R + P  +TY++LI+G CK   +     L   M K G+ 
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 436

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
                                         P++  FNTL+D      +      +   M 
Sbjct: 437 ------------------------------PSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 466

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              IK DVI+   +++     G +  A+ +   M+ + + P+   Y++II    +  +  
Sbjct: 467 QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTE 526

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             L + + M+ +GV+  I  YN+LL  L +   +D A +L   L ++GL PD+++YNTII
Sbjct: 527 QALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 586

Query: 601 CGYCS 605
              C+
Sbjct: 587 SACCN 591



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 223/480 (46%), Gaps = 21/480 (4%)

Query: 95  GKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           GK  +  ++F D + D G       Y+ +I+ +V+ G ++    +   M   G    P++
Sbjct: 208 GKGSDALKVF-DEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP--KPNV 264

Query: 150 VQR--LMSCLVDSNSVGQYYKL-----CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHR 202
           V    L+S L  +  + +   L       +M   GF  Y  L +GL R G  +    +  
Sbjct: 265 VTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGF-TYSILFDGLTRTGESQTMLSLFA 323

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           + +++G +    TC+ +L  LC +G++  A  +F++L+  G  P  V ++TLIN +C+  
Sbjct: 324 ESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVR 383

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L  AF ++  M    + PD I Y+ LI+GL K   + +  +L++     G+   V  F+
Sbjct: 384 DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 443

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++DAY   G + +       M   G   +VIS+  ++K  C+ G++ EA  +   ++ +
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK 503

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            + P+   Y+S+ID + +SG       L + M   G+    V  +LL+ GL     + +A
Sbjct: 504 DVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA 563

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
               +      L P++  +NT++  CC        ++L   M  Y I+P + T   L+  
Sbjct: 564 EELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSA 623

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +AS G +     L+ QML + + P    Y  ++    + +N S    + K M   G+A D
Sbjct: 624 LASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 204/437 (46%), Gaps = 42/437 (9%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           +P++ +CN +L+ L   G+  +  + F +L+  G +P+   ++ ++ A      L+ A  
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 270 LYNLM--MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           +   M   E    PD   Y+++I GL+++G+  +  ++    +D G+  + + +++++D 
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +V  GD+    +  D+ML+ G  PNV++Y++L+ GLC+ GR+ E   L  ++    + P 
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298

Query: 388 LLTYSSLIDGF-----------------------------------CKSGKLRDGFSLYD 412
             TYS L DG                                    CK GK+     +++
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            ++  GL P  V+ + LING      +  A   F Q     + P+   +N L++G C+L+
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
             T    L M M    + P V T   LI    + G L     +   M ++G+  DVI++ 
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           +++    K   I   + +   M    VAP+  +YN +++  I+  + + AL L  ++ + 
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNS 538

Query: 588 GLEPDIITYNTIICGYC 604
           G+   I+TYN ++ G C
Sbjct: 539 GVSASIVTYNLLLKGLC 555



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 156/330 (47%), Gaps = 32/330 (9%)

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +P L   ++L++ L   GR  +        +  G + D   ++ V+ A V  GD+  A+ 
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 340 TYDRM--LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
              RM    G   P+  SY+++I GL + G+  +A  +F +++   + P+ +TY+++IDG
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
             K G L  GF L D M+  G KP                              N+  +N
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKP------------------------------NVVTYN 268

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            L+ G CR  R  +T  L   M  +++ PD  T+++L  G+   G   + + LF + LK+
Sbjct: 269 VLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKK 328

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G+     T S +++GL K   ++    +F+++   G+ P   IYN L+N   +  +L  A
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             +F Q+  R + PD ITYN +I G C L 
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLE 418


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 225/491 (45%), Gaps = 26/491 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSN----SVGQYYK 168
           +S LI  Y + G  +++VE F  M D G    PD+     ++  +V       ++  Y +
Sbjct: 134 FSVLIAAYAKSGMAEKAVESFGKMKDFGC--KPDVFTYNSILHVMVQKEVFLLALAVYNQ 191

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           + +         +  L+NGL + G  ++A  M  ++ Q+G  PN +    IL  LC   +
Sbjct: 192 MLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKR 251

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
             +   L + + + G  P+ +T + L++ FCK  ++++AF L  L  +   V  +  YS 
Sbjct: 252 TDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSS 311

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDGLF+A R  E  E        G++ DVV+++ ++  +  +G V  A+   + M   G
Sbjct: 312 LIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG 371

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+   Y+ LIKG C  G L +A  L  ++      P+  TY+ LI G C++G L +  
Sbjct: 372 LSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEAR 431

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFI--------- 455
            +++ M   G  P  +  + LI+GL      +  R  F  + +   P+LF+         
Sbjct: 432 QIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRV 491

Query: 456 -----FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
                  T+++  C         KL M +    + PD++T+ VLI G     +++ A  L
Sbjct: 492 MDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKL 551

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F ++  +G +PD +TY  +I G  +         +   M +NG  P  A+Y  L+    +
Sbjct: 552 FRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCR 611

Query: 571 ECNLDAALKLF 581
           +  L  A  L+
Sbjct: 612 KGKLSVAFSLW 622



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 190/452 (42%), Gaps = 99/452 (21%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P P   TFS LI A+ K    EKA + +  M +    PD+  Y+ ++  + +    KE  
Sbjct: 130 PPP---TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQ----KEVF 182

Query: 304 ELLLTALDRGLKLDV----VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            L L   ++ LKL+       F  +++     G    A++ +D M   G  PN + Y+I+
Sbjct: 183 LLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTII 242

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL--------- 410
           + GLCQ  R  +   L   + +    P  +T ++L+DGFCK G++ + F+L         
Sbjct: 243 LSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGY 302

Query: 411 -------------------YDN-------MIKRGLKPDAVVCSLLIN-----GLMGDALR 439
                              YD        M K G++PD V+ ++LI      G++  AL 
Sbjct: 303 VLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALN 362

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
                 +  L P+ + +N L+ G C +        L + +   +  P   T+T+LI G+ 
Sbjct: 363 MLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMC 422

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME--------- 550
             G L  A  +F QM   G +P ++T++A+I GL K   +    H+F  ME         
Sbjct: 423 RNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFL 482

Query: 551 ---------------------------------------RNGVAPDIAIYNVLLNMLIKE 571
                                                   +GV PDI  YNVL+N   K 
Sbjct: 483 RLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKA 542

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            N++ A KLF +L  +G  PD +TY T+I G+
Sbjct: 543 KNINGAFKLFRELQLKGHSPDSVTYGTLIDGF 574



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/457 (22%), Positives = 201/457 (43%), Gaps = 56/457 (12%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L++ + ++G+IDE+  +       G  L       L+  L  +    +  + CR M   G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                 +Y  L+ G    G+++ A +M   + QRG  P+    N ++K  C  G +  A 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           SL   +      P   T++ LI   C+   L++A Q++N M  +   P ++ ++ LIDGL
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456

Query: 294 FKAGRLKEGNEL-----------LLTALDRGLK--LDVVVFSSVMDAYVGIGDVGRAVQT 340
            KAG L+E   L           L   L +G    +D     ++++     G + +A + 
Sbjct: 457 CKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKL 516

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
             ++ + G +P++++Y++LI G C+   +  A  LF ++ ++   P  +TY +LIDGF +
Sbjct: 517 LMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHR 576

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQ------------ 443
             +  D F + D M+K G  P + V   L+      G +  A   + +            
Sbjct: 577 VDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDET 636

Query: 444 ---------------SVRMTLIPNLFI-------FNTLMDGCCRLKRATDTVKLFMLMGM 481
                          +VR  L  N  +       +   + G C+ +R+ + +K+F+++  
Sbjct: 637 LKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKE 696

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
             +  +  +  +LI G+   G+L  A+ +F   L++G
Sbjct: 697 CQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKG 733



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 162/356 (45%), Gaps = 31/356 (8%)

Query: 252 STLINAFCKEAKL-EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           S ++N   +E +  E  F+ +            + ++++ID L K        ++L    
Sbjct: 64  SEIVNDVMREQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELK 123

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
           +  +++    FS ++ AY   G   +AV+++ +M + G  P+V +Y+ ++  + Q+   +
Sbjct: 124 NSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFL 183

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
            A  ++ Q+L     P+  T+  L++G CK+GK  D   ++D M ++G+ P+ ++ ++++
Sbjct: 184 LALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIIL 243

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           +GL                              C+ KR  D  +L   M +    PD IT
Sbjct: 244 SGL------------------------------CQAKRTDDVHRLLNTMKVSGCCPDSIT 273

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
              L+ G    G +  A  L     K G    +  YS++I GLF+ K         + M 
Sbjct: 274 CNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMF 333

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           + G+ PD+ +Y +L+    +   +D AL +   +T RGL PD   YN +I G+C +
Sbjct: 334 KAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDV 389



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 150/343 (43%), Gaps = 24/343 (6%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
            C Y+ LI    R G +DE+ +IF  M ++G   S      L+  L  +  + +   L  
Sbjct: 411 SCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFY 470

Query: 172 AMR-GKGFCVYEFLMNG----------------LLRKGVIENAFHMHRQVIQRGFVPNIV 214
            M  GK   ++  L  G                L   G+I  A+ +  Q+   G VP+I+
Sbjct: 471 KMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIM 530

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++   C    I  A  LF  L L G  P+ VT+ TLI+ F +  + E AF++ + M
Sbjct: 531 TYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQM 590

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           ++    P   +Y  L+    + G+L     L L  L R L         + + +   G++
Sbjct: 591 VKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL-RSLPSQEDETLKLAEEHFEKGEL 649

Query: 335 GRAVQTYDRMLNGGFLPN---VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
            +AV+    +L   F  N   +  Y+I + GLCQ  R  EA  +F  +   +++ +  + 
Sbjct: 650 EKAVRC---LLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSC 706

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
             LI+G CK G L     ++   +++G      +C+ L+  L+
Sbjct: 707 VMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLI 749


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 142/567 (25%), Positives = 249/567 (43%), Gaps = 76/567 (13%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LI +L  S   + A  +FDKM  +  +   F              +  L+  Y R G   
Sbjct: 153 LIGLLCDSGHLEDARELFDKMPARGCEPNEF-------------TFGILVRGYCRAGLAS 199

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
           + +E+   M  MGI   P+ V                             +Y  L++   
Sbjct: 200 KGLELLGQMRTMGIL--PNNV-----------------------------LYNTLISSFC 228

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG----PK 245
           ++G   +A  +  ++ + G VP++ T N  +  LC +G+I  AS +F  + +      P 
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNV+T+  ++  FCKE  LE+A  L + M       +L  Y+I + GL + G+L E   +
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L   L  G++ D+  ++ VMD     G +  A      M+  G LP+ ++YS L+ G C 
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G++ EA  L  +++     P+  T + L+    K G++ +  +L   M ++G   D V 
Sbjct: 409 KGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVT 468

Query: 426 CSLLINGL-----------------------MGDALRFFFQSVRMTL-----IPNLFIFN 457
           C+++IN L                       +G+    F   V  T+      P+L  ++
Sbjct: 469 CNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYS 528

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           T++ G C+  R  D  K F+ M    ++PD   +   I     +G +SSA  +   M KR
Sbjct: 529 TIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKR 588

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G    + TY+++I GL     I     +   M   GV+PD+  YN +LN L +   ++ A
Sbjct: 589 GCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDA 648

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
             +  ++  +G+ P+I ++  +I  +C
Sbjct: 649 PSVLDEMLQKGISPNISSFRILIKAFC 675



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 211/495 (42%), Gaps = 67/495 (13%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y  L+   +R+  +E    +++ ++     P   T N ++  LC +G + +A  LFD +
Sbjct: 114 LYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKM 173

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +PN  TF  L+  +C+     K  +L   M  M ++P+ ++Y+ LI    K G+ 
Sbjct: 174 PARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKT 233

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL----PNVIS 355
            +  +L+    + GL   V  F+S + A  G G +  A + +  M     L    PNVI+
Sbjct: 234 HDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVIT 293

Query: 356 YSILIKGLCQQGRLVEACGLFGQV------------------LIRR-------------- 383
           Y +++ G C++G L EA  L   +                  LIR               
Sbjct: 294 YKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEML 353

Query: 384 ---LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRF 440
              +EP + +Y+ ++DG CK+G L D   L   MI+ G+ PD V  S L++G       F
Sbjct: 354 GIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVF 413

Query: 441 FFQSVRMTLI-----PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
              ++   +I     PN +  N L+    +  R ++   L   M       D +T  ++I
Sbjct: 414 EANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIII 473

Query: 496 RGIASQGSLSSAILLFFQMLKRG-----------------------LTPDVITYSAIIHG 532
             + + G L  AI +   M   G                        TPD++TYS II G
Sbjct: 474 NALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISG 533

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K   +      F  M   G+ PD AIY+  ++   +E  + +A ++   +  RG    
Sbjct: 534 LCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKT 593

Query: 593 IITYNTIICGYCSLN 607
           + TYN++I G  S N
Sbjct: 594 LQTYNSLILGLGSKN 608



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 198/426 (46%), Gaps = 32/426 (7%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+I   N +LK      ++   S L+  ++L    P   TF+ LI   C    LE A +L
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           ++ M      P+   + IL+ G  +AG   +G ELL      G+  + V++++++ ++  
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL----EP 386
            G    A +  D+M   G +P+V +++  I  LC  G+++EA  +F  + I        P
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG-----LKPDAVVCSLLINGLMGDALRFF 441
           +++TY  ++ GFCK G L +  +L D M +          +  +  L+ NG + +A    
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + + + + P+++ +N +MDG C+    +D   L  LM    I PD +T++ L+ G  S+
Sbjct: 350 KEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSK 409

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +  A  L  +M+    +P+  T + ++H L+K   IS   ++ + M   G   D    
Sbjct: 410 GKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTC 469

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRG-----------------------LEPDIITYNT 598
           N+++N L     LD A+++   +   G                         PD++TY+T
Sbjct: 470 NIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYST 529

Query: 599 IICGYC 604
           II G C
Sbjct: 530 IISGLC 535



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 211/452 (46%), Gaps = 31/452 (6%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y   + GL+R G +  A+ + ++++  G  P+I + N ++  LC NG + +A  L  +++
Sbjct: 329 YNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMI 388

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+ VT+STL++ +C + K+ +A  L + M+  +  P+    ++L+  L+K GR+ 
Sbjct: 389 RNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRIS 448

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF----------- 349
           E   LL    ++G  +D V  + +++A    G + +A++  + M   G            
Sbjct: 449 EAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFI 508

Query: 350 ------------LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
                        P++++YS +I GLC+ GRL +A   F +++ + L+P    Y + I  
Sbjct: 509 GLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHS 568

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF-----FQSVRMTLI-P 451
           FC+ GK+   F +  +M KRG        + LI GL G   + F        +R   + P
Sbjct: 569 FCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGL-GSKNQIFELYGLIDEMREKGVSP 627

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           ++  +N +++  C   R  D   +   M    I P++ +  +LI+         ++  +F
Sbjct: 628 DVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF 687

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
              L      + + Y+ + + L  G  ++    +F+            +Y  L++ L K+
Sbjct: 688 EIALNVCGHKEAL-YTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKD 746

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
             L+AA  +  +L D+G + D  ++  +I G+
Sbjct: 747 EKLEAASDVLHRLIDKGYQFDPASFMPVIDGF 778



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 3/166 (1%)

Query: 442 FQSVRMTLI---PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
           F+S+R       P+++++N L+  C R  R      L+  M +  + P+  T  +LI  +
Sbjct: 98  FKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLL 157

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G L  A  LF +M  RG  P+  T+  ++ G  +    S GL +   M   G+ P+ 
Sbjct: 158 CDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNN 217

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +YN L++   KE     A KL  ++ + GL P + T+N+ I   C
Sbjct: 218 VLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALC 263



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 136/301 (45%), Gaps = 21/301 (6%)

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF---- 178
           IG +D+++         G   +PDLV    ++S L  +  +    K    M  KG     
Sbjct: 508 IGLVDDTIS--------GKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDS 559

Query: 179 CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
            +Y+  ++   R+G I +AF + + + +RG    + T N ++  L    QI     L D 
Sbjct: 560 AIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDE 619

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           +   G  P+V T++ ++N  C+  ++  A  + + M++  + P++  + ILI    KA  
Sbjct: 620 MREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACD 679

Query: 299 LKEGNELLLTALD---RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            K  +E+   AL+       L  ++F+ ++   VG G V  A + ++  L+  F      
Sbjct: 680 FKASHEVFEIALNVCGHKEALYTLMFNELL---VG-GKVAEAKELFETALDRSFDIGNFL 735

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  LI  LC+  +L  A  +  +++ +  +    ++  +IDGF K G       L + M+
Sbjct: 736 YKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMM 795

Query: 416 K 416
           +
Sbjct: 796 E 796



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 49/244 (20%), Positives = 98/244 (40%), Gaps = 17/244 (6%)

Query: 48  PTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMR--DVASHVFDKMVIQFGKTYNFFRLFR 105
           P  AI +  + H+      I+    VL   + R  +     ++ +++  G     F L+ 
Sbjct: 557 PDSAI-YDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYG 615

Query: 106 --DSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ-----RL 153
             D + + G     C Y+ ++      G+I+++  +   M   GI  SP++       + 
Sbjct: 616 LIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGI--SPNISSFRILIKA 673

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
                D  +  + +++   + G    +Y  + N LL  G +  A  +    + R F    
Sbjct: 674 FCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGN 733

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
                ++ RLC + ++  AS +   L+  G + +  +F  +I+ F K      A +L   
Sbjct: 734 FLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAER 793

Query: 274 MMEM 277
           MMEM
Sbjct: 794 MMEM 797


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 220/490 (44%), Gaps = 72/490 (14%)

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           +K + E       ++I++GF+P++  CN +LK L  +  +  AS++++ ++  G  P V+
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           TF+T++++  K   LE+  +++  M   ++    + Y+ILI+G  K G+++E        
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL------------------- 350
              G  +    F+ +++ Y   G    A    D MLN G                     
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359

Query: 351 ------------PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
                       P+V+SY+ L+ G  + G+ VEA  LF  +    + PS++TY++LIDG 
Sbjct: 360 DDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419

Query: 399 CKSGKLR-------------------------DGF----------SLYDNMIKRGLKPDA 423
           C+SG L                           GF           +YD M+++G+KPD 
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479

Query: 424 VVCSLLING--LMGDALRFFFQSVRMTLI----PNLFIFNTLMDGCCRLKRATDTVKLFM 477
              +    G   +GD+ + F     M       P+L I+N  +DG C++      ++   
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            +    + PD +T+T +IRG    G    A  L+ +ML++ L P VITY  +I+G  K  
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            +         M++ GV P++  +N LL  + K  N+D A +   ++ + G+ P+  +Y 
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659

Query: 598 TIICGYCSLN 607
            +I   C   
Sbjct: 660 MLISKNCDFE 669



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/513 (22%), Positives = 225/513 (43%), Gaps = 40/513 (7%)

Query: 33  NQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVI 92
           N+A+A+   +I+       I F     +C  + ++ ++  + L+   R+          I
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN----------I 269

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +F +                  Y+ LI  + + GK++E+      M   G  ++P     
Sbjct: 270 EFSEV----------------TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 313

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+            + +   M   G       Y   +  L   G I++A    R+++   
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSM 369

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
             P++V+ N ++      G+   AS LFD L      P++VT++TLI+  C+   LE A 
Sbjct: 370 AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           +L   M    + PD+I Y+ L+ G  K G L    E+    L +G+K D   +++     
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE 489

Query: 329 VGIGDVGRAVQTYDRML-NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           + +GD  +A + ++ M+      P++  Y++ I GLC+ G LV+A     ++    L P 
Sbjct: 490 LRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 549

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFF 442
            +TY+++I G+ ++G+ +   +LYD M+++ L P  +   +LI      G +  A ++  
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYST 609

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +  +  + PN+   N L+ G C+     +  +    M    I P+  ++T+LI       
Sbjct: 610 EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFE 669

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
                + L+ +ML + + PD  T+ A+   L K
Sbjct: 670 KWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 179/369 (48%), Gaps = 12/369 (3%)

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           + K++  EK    +  M+    +P +   +I++  L  +  + + + +  T ++ G+   
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           V+ F++++D+    GD+ R  + +  M       + ++Y+ILI G  + G++ EA    G
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP-----DAVVCSLLING 432
            +       +  +++ LI+G+CK G   D + + D M+  G+ P     +  +C+L   G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            + DA R    S+     P++  +NTLM G  ++ +  +   LF  +   +I P ++T+ 
Sbjct: 358 RIDDA-RELLSSM---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            LI G+   G+L  A  L  +M  + + PDVITY+ ++ G  K  N+S+   ++  M R 
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQL--TDRGLEPDIITYNTIICGYCSLNSCL 610
           G+ PD   Y       ++  + D A +L  ++  TD    PD+  YN  I G C + + +
Sbjct: 474 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA-PDLTIYNVRIDGLCKVGNLV 532

Query: 611 IDGYFKSQI 619
               F+ +I
Sbjct: 533 KAIEFQRKI 541



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 32/293 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L++ +V+ G +  + E++  M   GI   PD                 Y    RA+ 
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGI--KPD----------------GYAYTTRAV- 487

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF-VPNIVTCNKILKRLCINGQIGNAS 233
                       G LR G  + AF +H +++      P++   N  +  LC  G +  A 
Sbjct: 488 ------------GELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
                +  VG  P+ VT++T+I  + +  + + A  LY+ M+   L P +I Y +LI G 
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            KAGRL++  +       RG++ +V+  ++++      G++  A +   +M   G  PN 
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 655

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            SY++LI   C   +  E   L+ ++L + +EP   T+ +L     K  + R+
Sbjct: 656 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESRE 708


>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 418

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 203/395 (51%), Gaps = 43/395 (10%)

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSC--LVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR 190
           +++ +   M  YL    V+  + C  L   + +   +  CR        V E LM   LR
Sbjct: 65  DLYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRK-------VLEHLMK--LR 115

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
              +   F+  +++++ G+ P++   N ++ R C  G++  A  +FD +     +P+VV+
Sbjct: 116 YFRLVWGFY--KEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVS 173

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           F+TL+N + +   L++ F+L + M    + PD+  YS+LI+GL K  ++ E NE+L   L
Sbjct: 174 FNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEML 233

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
           D GL  + V F++++D +   G V  A++ Y +ML+ GFLP++I+Y+ LI GLC++G L 
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLG 293

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           +A  L  +++++ L+P  +TY++LIDG CK G L   F L   MI+  ++ D V  + LI
Sbjct: 294 QARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALI 353

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           +GL                              CR  RA D  K+   M    +KPD  T
Sbjct: 354 SGL------------------------------CREGRAGDAEKMLREMLTVGLKPDNGT 383

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           +T+++      G + +A  L  +M + G  P V+T
Sbjct: 384 YTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 176/384 (45%), Gaps = 40/384 (10%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  LM   L  G + +A    R   +        TC K+L+ L            +  +
Sbjct: 68  VFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEI 127

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G  P++  F+ L++ FCKE ++  A  +++ + +  L P                  
Sbjct: 128 LECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPS----------------- 170

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                             VV F+++M+ Y+ +GD+    +    M   G  P+V +YS+L
Sbjct: 171 ------------------VVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVL 212

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC++ ++ EA  +  ++L   L P+ +T+++LIDG CK+GK+     +Y  M+ +G 
Sbjct: 213 INGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGF 272

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD +  + LI GL     +G A     + +   L P+   + TL+DG C+      T +
Sbjct: 273 LPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFE 332

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M   NI+ D +T+T LI G+  +G    A  +  +ML  GL PD  TY+ I++   
Sbjct: 333 LRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFC 392

Query: 535 KGKNISVGLHMFKLMERNGVAPDI 558
           K  ++     + + M+RNG  P +
Sbjct: 393 KTGDVKTASKLLREMQRNGPVPGV 416



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 142/270 (52%), Gaps = 5/270 (1%)

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           Y  +L  G+ P++  ++IL+   C++G +  A  +F  +    L PS++++++L++G+ +
Sbjct: 124 YKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIR 183

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
            G L +GF L   M   G++PD    S+LINGL     M +A     + +   L+PN   
Sbjct: 184 LGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVT 243

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           F TL+DG C+  +    ++++  M      PD+IT+  LI G+  +G L  A  L  +M+
Sbjct: 244 FTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMI 303

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            +GL PD ITY+ +I G  K  ++ +   + K M R  +  D   Y  L++ L +E    
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAG 363

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            A K+  ++   GL+PD  TY  I+  +C 
Sbjct: 364 DAEKMLREMLTVGLKPDNGTYTMIMNEFCK 393



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 164/342 (47%), Gaps = 24/342 (7%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDM 79
           +K H   + F+    +L +L+K         F+K    C   P++     L+H   +   
Sbjct: 92  TKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGE 151

Query: 80  RDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMS 139
             +A  VFD +              + SL      ++ L+  Y+R+G +DE   + + M 
Sbjct: 152 MRLAQMVFDAIT-------------KWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198

Query: 140 DMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGV 193
             G+   PD+     L++ L   + + +  ++   M   G       +  L++G  + G 
Sbjct: 199 ATGV--QPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGK 256

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
           ++ A  +++Q++ +GF+P+++T N ++  LC  G +G A  L + +++ G KP+ +T++T
Sbjct: 257 VDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTT 316

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           LI+  CKE  LE  F+L   M+  ++  D + Y+ LI GL + GR  +  ++L   L  G
Sbjct: 317 LIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVG 376

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           LK D   ++ +M+ +   GDV  A +    M   G +P V++
Sbjct: 377 LKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 132/289 (45%), Gaps = 30/289 (10%)

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           D+ VFS +M AY+  G V  A+Q +             +   +++ L +        G +
Sbjct: 65  DLYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFY 124

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
            ++L     PSL  ++ L+  FCK G++R    ++D + K  L+P  V            
Sbjct: 125 KEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVS----------- 173

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
                              FNTLM+G  RL    +  +L   M    ++PDV T++VLI 
Sbjct: 174 -------------------FNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLIN 214

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+  +  +  A  +  +ML  GL P+ +T++ +I G  K   + + + ++K M   G  P
Sbjct: 215 GLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLP 274

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           D+  YN L+  L +  +L  A  L  ++  +GL+PD ITY T+I G C 
Sbjct: 275 DLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCK 323



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 52/120 (43%)

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           D+   + L+      G +  AI  F    K  +     T   ++  L K +   +    +
Sbjct: 65  DLYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFY 124

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           K +   G  P +  +N+L++   KE  +  A  +F  +T   L P ++++NT++ GY  L
Sbjct: 125 KEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRL 184


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 155/579 (26%), Positives = 265/579 (45%), Gaps = 36/579 (6%)

Query: 39  LANLI-KTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKT 97
           +A+LI   N+ T A+Q FKW  N     +       L+Q   +  A H FD +       
Sbjct: 42  IAHLILDQNSATKALQTFKWASNLPKFTHSQSTYRALIQ---KLCAFHRFDTV------- 91

Query: 98  YNFFRLFRDSLGDFGCDYSFL--IENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS 155
           Y        ++G    +  FL  I    R   I   +++   +S  G   S  +   ++ 
Sbjct: 92  YQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILD 151

Query: 156 CLV--DSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
            LV  D +   ++Y+  + M G G       +  LM GL     I + F + + +  RG 
Sbjct: 152 VLVKVDIDVAREFYR--KQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGV 209

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            PN V  N +L  LC NG++G A SL D +     +PN VTF+ LI A+CKE  L +A  
Sbjct: 210 KPNAVVYNTLLHALCKNGKVGRARSLMDEI----EEPNDVTFNVLIAAYCKEENLVQALV 265

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           L      +  VPD++  + +++ L  AGR+ E  E+L     +G  +DVV +++++  + 
Sbjct: 266 LLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFC 325

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
            +G +  A +    M   G LPNV +Y+ILI G C  G    A  +F  +    +  +  
Sbjct: 326 RLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFD 385

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRG------LKP-DAVVCSLLINGLMGDALRFFF 442
           TY +LI G    G++ +G  + + M +        + P ++V+  L    +  +AL F  
Sbjct: 386 TYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLM 445

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +  +  L P     +  + G C      +   +F  M      P+++ +  L+ G   +G
Sbjct: 446 KMEK--LFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEG 503

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGL-FKGKNISVGLHMFKLMERNGVAPDIAIY 561
           +L  A  L  +M+  G       ++A+IHG   +GK+ S  L +   M   G  PD   Y
Sbjct: 504 NLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDES-ALKLLDDMVGRGCVPDRGTY 562

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           + L++ L ++ N   AL +F Q+ ++G+ PD  T+N+++
Sbjct: 563 SPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLL 601



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 157/360 (43%), Gaps = 47/360 (13%)

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMME-MDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           T+  LI   C   + +  +QL + M   +   PD  I+  +I GL +A  +    ++L  
Sbjct: 74  TYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDL 133

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR-MLNGGFLPNVISYSILIKGLCQQG 367
               G    + +F+S++D  V + D+  A + Y + M+  G   +  +++IL+KGL    
Sbjct: 134 ISKFGKNPSLKIFNSILDVLVKV-DIDVAREFYRKQMMGSGVQGDDYTFAILMKGL---- 188

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
                                          C + ++ DGF L   M  RG+KP+AVV +
Sbjct: 189 -------------------------------CLTNRIGDGFRLLQVMKSRGVKPNAVVYN 217

Query: 428 LLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            L+     NG +G A R     +     PN   FN L+   C+ +     + L       
Sbjct: 218 TLLHALCKNGKVGRA-RSLMDEIEE---PNDVTFNVLIAAYCKEENLVQALVLLEKSFSL 273

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
              PDV+T T ++  + + G ++ A+ +  ++  +G   DV+ Y+ ++ G  +   I V 
Sbjct: 274 GFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVA 333

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
               K MER G  P++  YN+L++        D AL +F  +   G+  +  TY+T+I G
Sbjct: 334 HRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKG 393



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/291 (20%), Positives = 126/291 (43%), Gaps = 11/291 (3%)

Query: 336 RAVQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR-RLEPSLLTYSS 393
           +A+QT+    N   F  +  +Y  LI+ LC   R      L  ++       P    + +
Sbjct: 54  KALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLT 113

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG---DALRFFFQSVRMT-- 448
           +I G  ++  +     + D + K G  P   + + +++ L+    D  R F++   M   
Sbjct: 114 VIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKVDIDVAREFYRKQMMGSG 173

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           +  + + F  LM G C   R  D  +L  +M    +KP+ + +  L+  +   G +  A 
Sbjct: 174 VQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRAR 233

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  ++ +    P+ +T++ +I    K +N+   L + +     G  PD+     ++ +L
Sbjct: 234 SLMDEIEE----PNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEIL 289

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
                +  A+++  ++  +G   D++ YNT++ G+C L    +   F  ++
Sbjct: 290 CNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEM 340


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 222/456 (48%), Gaps = 72/456 (15%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LI +++    +D AS VF  ++   G   +   +F           S LI  Y+  G + 
Sbjct: 35  LIQIVVSRKGKDSASAVFAAILETKGAQRSDIYVF-----------SGLITAYLESGFLR 83

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
           +++E F        ++  D  ++++  L+      +Y+KL          V+ F      
Sbjct: 84  DAIECFRLTRKHKFWVPFDTCRKVLEHLMKL----KYFKL----------VWGF------ 123

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
                      ++++++ G+  ++   N ++ R C  G+I  A S+FD +   G +P+VV
Sbjct: 124 -----------YKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVV 172

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           +F+TLIN + +   L+K F+L   M    + PD+   ++LI+GL K  ++ E NEL    
Sbjct: 173 SFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEM 232

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           LD+GL  + V F++++D +   G V  A++ Y +ML  G+ P++I+Y+ LI GLC++G L
Sbjct: 233 LDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDL 292

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  L  ++ ++ L+P  +TY++LIDG CK G L   F L   MI+  ++ D V  + L
Sbjct: 293 KQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTAL 352

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
           I+GL                              C+  RA D  K+   M    +KP+  
Sbjct: 353 ISGL------------------------------CQEGRAVDAEKMLREMLSVGLKPENG 382

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           T+T++I G   QG + +A  L  +M + G  P V+T
Sbjct: 383 TYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 179/382 (46%), Gaps = 40/382 (10%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  L+   L  G + +A    R   +  F     TC K+L+ L            +  +
Sbjct: 68  VFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEI 127

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   ++  F+ L++ FCKE ++  A  +++ + +                       
Sbjct: 128 LECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKC---------------------- 165

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                        GL+  VV F+++++ Y+ +GD+ +  +    M   G  P+V + ++L
Sbjct: 166 -------------GLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVL 212

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC++ ++ EA  LF ++L + L P+ +T+++LIDG CKSG++     +Y  M+++G 
Sbjct: 213 INGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGY 272

Query: 420 KPDAVVCSLLINGL--MGDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD +  + LI GL   GD  +     V M+   L P+   + TL+DG C+        +
Sbjct: 273 SPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFE 332

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M   +I+ D + +T LI G+  +G    A  +  +ML  GL P+  TY+ II+G  
Sbjct: 333 LRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFC 392

Query: 535 KGKNISVGLHMFKLMERNGVAP 556
           K  ++     + K M+R+G  P
Sbjct: 393 KQGDVKTASKLLKEMQRDGHVP 414



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 158/328 (48%), Gaps = 5/328 (1%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+ ++S LI    ++G L++  E           +       V++  + +         Y
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             +L  G+  ++  ++IL+   C++G +  A  +F  +    L PS++++++LI+G+ + 
Sbjct: 125 KEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRL 184

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L  GF L   M   G+ PD    ++LINGL     M +A   F + +   L+PN   F
Sbjct: 185 GDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTF 244

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  R    ++++  M      PD+IT+  LI G+  +G L  A  L  +M  
Sbjct: 245 TTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSM 304

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL PD ITY+ +I G  K  ++     + K M    +  D   Y  L++ L +E     
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVD 364

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+  ++   GL+P+  TY  II G+C
Sbjct: 365 AEKMLREMLSVGLKPENGTYTMIINGFC 392



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 52/122 (42%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           + D+   + LI      G L  AI  F    K        T   ++  L K K   +   
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +K +   G    +  +N+L++   KE  +  A  +F  +T  GL P ++++NT+I GY 
Sbjct: 123 FYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYI 182

Query: 605 SL 606
            L
Sbjct: 183 RL 184


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 225/454 (49%), Gaps = 57/454 (12%)

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           R++   G  P++  CN +L+ L    +  +  ++ + +L +G +P++VT++TL+++F KE
Sbjct: 158 REMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKE 217

Query: 262 AKLEKAFQLYNLMMEMDL-----VPDLIIYSILIDGLFKAGRLKEGNEL----------- 305
            + +K      L+ EM+      +P+ + Y+++I GL + G L+E  EL           
Sbjct: 218 GRKDKVAM---LLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKAS 274

Query: 306 ------LLTAL-----------------DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
                 L+T L                 + G+   VV +++++   +  G V  A   + 
Sbjct: 275 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 334

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M   G LP+VI+Y+ L+ G C+ G L EA  LFG +    L P++LTY+  IDG+C+ G
Sbjct: 335 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLG 394

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFN 457
            L +   L + M ++G  P+    ++L+ G      +  A  FF + +   L P+ F +N
Sbjct: 395 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYN 454

Query: 458 TLMDGCCRL-----KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           T +  C  L      RA +  ++ ML G   I  D +T+ +LI G+   G+L  A  L  
Sbjct: 455 TRI--CAELILGDIARALELREVLMLEG---ISSDTVTYNILIHGLCKTGNLKDAKELQM 509

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +M+  GL PD ITY+ +IH   +   +     +F  M  +G+ P    + V+++   +  
Sbjct: 510 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRG 569

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           NL +A   F ++ + G+EP+ ITYN +I   C +
Sbjct: 570 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM 603



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 214/427 (50%), Gaps = 10/427 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    R G ++E+ E+   M  +    S      L++ L+    V + Y L   M 
Sbjct: 244 YNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLEME 302

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  +++GLL+ G++E A     ++   G +P+++T N +L   C  G + 
Sbjct: 303 NEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLK 362

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF  L   G  P V+T++  I+ +C+   LE+A  L   M E   +P++  Y+IL+
Sbjct: 363 EALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILM 422

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G      L    E     L +GL+ D   +++ + A + +GD+ RA++  + ++  G  
Sbjct: 423 KGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGIS 482

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            + ++Y+ILI GLC+ G L +A  L  +++   L+P  +TY+ LI   C+ G LR+   +
Sbjct: 483 SDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKI 542

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           ++NMI  GL P AV  +++I+     G +  A  +F + +   + PN   +N L+   CR
Sbjct: 543 FNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 602

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           + R       F  M    +  +  T+T+LI G    G+   A+  +F+M + G+ PD +T
Sbjct: 603 MGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLT 662

Query: 526 YSAIIHG 532
           + A++ G
Sbjct: 663 HKALVKG 669



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 235/500 (47%), Gaps = 47/500 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ L++++++ G+ D+   +   M   G    P+ V    +++ L     + +  +L   
Sbjct: 207 YNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG 266

Query: 173 MR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR       F  Y  L+ GLL +G ++  + +  ++   G +P +VT N ++  L  +G 
Sbjct: 267 MRLSKKASSF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGL 325

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A   F  +  +G  P+V+T+++L+N +CK   L++A  L+  +    L P ++ Y+I
Sbjct: 326 VEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNI 385

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            IDG  + G L+E   L     ++G   +V  ++ +M   + +  +  A + +D ML+ G
Sbjct: 386 RIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKG 445

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+  +Y+  I      G +  A  L   +++  +    +TY+ LI G CK+G L+D  
Sbjct: 446 LQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAK 505

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L   M+  GL+PD +  + LI+     GL+ +A + F               N + DG 
Sbjct: 506 ELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFN--------------NMISDG- 550

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
                               + P  +T TV+I     +G+L SA   F +ML+ G+ P+ 
Sbjct: 551 --------------------LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 590

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           ITY+ +IH L +     +  H F  M   G+  +   Y +L++   K  N + A++ + +
Sbjct: 591 ITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFE 650

Query: 584 LTDRGLEPDIITYNTIICGY 603
           +   G+ PD +T+  ++ G+
Sbjct: 651 MHQNGIHPDYLTHKALVKGF 670



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 164/388 (42%), Gaps = 53/388 (13%)

Query: 70  LIHVLLQSDMRDVASHVFDKM--------VIQFGKTYN--------------FFRLFRDS 107
           +IH LLQS + + A   F +M        VI +    N              F  L R  
Sbjct: 316 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 375

Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYY 167
           L      Y+  I+ Y R+G ++E+  +   M + G             CL +        
Sbjct: 376 LAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQG-------------CLPN-------- 414

Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                      C Y  LM G L    +  A     +++ +G  P+    N  +    I G
Sbjct: 415 ----------VCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILG 464

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
            I  A  L +VL+L G   + VT++ LI+  CK   L+ A +L   M+   L PD I Y+
Sbjct: 465 DIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYT 524

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI    + G L+E  ++    +  GL    V F+ ++ AY   G++  A   + +ML  
Sbjct: 525 CLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE 584

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PN I+Y++LI  LC+ GR   A   F ++L R L  +  TY+ LIDG CK G   D 
Sbjct: 585 GVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDA 644

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMG 435
              Y  M + G+ PD +    L+ G  G
Sbjct: 645 MRFYFEMHQNGIHPDYLTHKALVKGFDG 672



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 140/278 (50%), Gaps = 8/278 (2%)

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           +  +  M + G  P+V   + +++ L    R  + C +  ++L   +EPS++TY++L+D 
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 398 FCKSGKLRDGFSLYDNMIKRGLK--PDAVVCSLLINGLM--GD--ALRFFFQSVRMTLIP 451
           F K G+      L   M  RG    P+ V  +++I GL   GD        + +R++   
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 273

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           + F +N L+ G            L + M    I P V+T+  +I G+   G + +A + F
Sbjct: 274 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 333

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +M   GL PDVITY+++++G  K  N+   L +F  + R G+AP +  YN+ ++   + 
Sbjct: 334 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRL 393

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
            +L+ A  L  ++ ++G  P++ TY  ++ G  SLN C
Sbjct: 394 GDLEEARILKEEMGEQGCLPNVCTYTILMKG--SLNVC 429



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 15/150 (10%)

Query: 464 CRLKRAT-DT-----VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           C+ + AT DT     +  F  M  + + PDV     ++R +           +  +ML+ 
Sbjct: 139 CKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQL 198

Query: 518 GLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVA--PDIAIYNVLLNMLIKECNL 574
           G+ P ++TY+ ++    K G+   V + + K ME  G    P+   YNV++  L ++ +L
Sbjct: 199 GIEPSIVTYNTLLDSFLKEGRKDKVAM-LLKEMETRGSGCLPNDVTYNVVITGLTRKGDL 257

Query: 575 DAALKLFG--QLTDRGLEPDIITYNTIICG 602
           + A +L    +L+ +       TYN +I G
Sbjct: 258 EEAAELVEGMRLSKKA---SSFTYNPLITG 284


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 159/610 (26%), Positives = 269/610 (44%), Gaps = 44/610 (7%)

Query: 11  VWRSINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIA-- 68
            W   +    S   T  S L F   N     L  T N    +           SPN    
Sbjct: 11  TWFPFHHHLASHKPTSNSTLSFATTNH--EPLTTTTNSATRL-----------SPNFTPT 57

Query: 69  QLIHVLLQSDMRDVASHVFDKMVIQ--FGKTYNFFRLFRDSLG---DFGCDYSFLIENYV 123
           QL+H L + +      H+F     Q  F  + + F+     LG   +F      L E  +
Sbjct: 58  QLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKI 117

Query: 124 RIGKIDES---VEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV 180
            +  ID     V I +Y S  G+Y   +++Q + +  V+   V   +             
Sbjct: 118 SLSVIDNDSLLVFIESYAS-FGLY--NEILQFVDAMEVEFGVVANTH------------F 162

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y FL+N L+    ++     H  ++ RG  P++ T N ++K LC   QI  A  L + + 
Sbjct: 163 YNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEME 222

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+  TF+T++  F +E  L+ A ++   M+E   V   +  ++L++G  K GR++
Sbjct: 223 DFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIE 282

Query: 301 EGNELLLT-ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           E    +   +L  G   D   F+ +++     G V  A++  D ML  GF P++ +Y+ L
Sbjct: 283 EALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSL 342

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+ G + EA  +  Q++ R   P+ +TY+++I   CK  ++ +   L   +  +G+
Sbjct: 343 ISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGI 402

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD    + LI GL        A+  + +       P+ F +N L+D  C   +  + + 
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALN 462

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M +     +VIT+  LI G      ++ A  +F QM  +G++ + +TY+ +I GL 
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLC 522

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K + +     +   M   G+ PD   YN LL    K  ++  A  +   +   G EPDI+
Sbjct: 523 KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIV 582

Query: 595 TYNTIICGYC 604
           TY T+I G C
Sbjct: 583 TYGTLIAGLC 592



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 207/426 (48%), Gaps = 15/426 (3%)

Query: 122 YVRIGKIDESVEIFAYMS-DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF-- 178
           + + G+I+E++     MS   G +        L++ L  +  V    ++   M  +GF  
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334

Query: 179 --CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
               Y  L++GL + G ++ A  +  Q+I+R   PN VT N I+  LC   Q+  A+ L 
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
            VL   G  P+V T+++LI   C       A +LY  M      PD   Y++LID L   
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G+L+E   LL      G   +V+ +++++D +     +  A + +D+M   G   N ++Y
Sbjct: 455 GKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTY 514

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + LI GLC+  R+ EA  L  Q+++  L P   TY+SL+  FCK+G ++    +   M  
Sbjct: 515 NTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMAS 574

Query: 417 RGLKPDAVVCSLLINGLMG----DALRFFFQSVRM---TLIPNLFIFNTLMDGCCRLKRA 469
            G +PD V    LI GL      +A     ++++M    L P+   +N ++    R KR+
Sbjct: 575 DGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPH--AYNPVIQALFRRKRS 632

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIAS-QGSLSSAILLFFQMLKRGLTPDVITYSA 528
            + V+LF  M      PD +T+ ++ RG+    G +  A+    +ML+RG  P+  ++  
Sbjct: 633 KEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYM 692

Query: 529 IIHGLF 534
           +  GLF
Sbjct: 693 LAEGLF 698



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/523 (23%), Positives = 244/523 (46%), Gaps = 52/523 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI+   R  +I  ++ +   M D G+         +M   ++  ++    ++   M 
Sbjct: 198 FNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMV 257

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFH-MHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             G          L+NG  ++G IE A   +    ++ GF P+  T N ++  L   G +
Sbjct: 258 EAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHV 317

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
            +A  + D++L  G  P++ T+++LI+  CK  ++++A ++ N M+E D  P+ + Y+ +
Sbjct: 318 KHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTI 377

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I  L K  +++E  +L L    +G+  DV  ++S++       +   A++ Y  M   G 
Sbjct: 378 ISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGC 437

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+  +Y++LI  LC +G+L EA  L  ++ +     +++TY++LIDGFCK+ ++ +   
Sbjct: 438 HPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEE 497

Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           ++D M  +G+  ++V  + LI+GL     + +A +   Q +   L P+ F +N+L+   C
Sbjct: 498 IFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFC 557

Query: 465 R---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA-------------- 507
           +   +K+A D V+    M     +PD++T+  LI G+   G + +A              
Sbjct: 558 KAGDIKKAADIVQT---MASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINL 614

Query: 508 ---------------------ILLFFQMLKRGLTPDVITYSAIIHGLFKGKN-ISVGLHM 545
                                + LF +M+++   PD +TY  +  GL +G   I   +  
Sbjct: 615 TPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDF 674

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
              M   G  P+ + + +L   L     +   +KL   + ++ 
Sbjct: 675 VMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKA 717



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 156/368 (42%), Gaps = 40/368 (10%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQL-YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           PN  T + L+++  +E        L Y    + +  P   I+  ++  L KAG      +
Sbjct: 52  PNF-TPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKD 110

Query: 305 LLLTALDRGLKLDVVVFSSVM---DAYVGIGDVGRAVQTYDRM-LNGGFLPNVISYSILI 360
           +L    +  + L V+   S++   ++Y   G     +Q  D M +  G + N   Y+ L+
Sbjct: 111 ILK---EMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLL 167

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             L    +L         ++ R + P + T++ LI   C++ ++R    L + M   GL 
Sbjct: 168 NVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLL 227

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           PD    + ++ G                     FI    +DG  R+K           M 
Sbjct: 228 PDEKTFTTIMQG---------------------FIEEGNLDGAMRVKEQ---------MV 257

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-LKRGLTPDVITYSAIIHGLFKGKNI 539
                   +T  VL+ G   +G +  A+    +M L+ G  PD  T++ +++GL K  ++
Sbjct: 258 EAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHV 317

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              L +  +M R G  PDI  YN L++ L K   +D A+K+  Q+ +R   P+ +TYNTI
Sbjct: 318 KHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTI 377

Query: 600 ICGYCSLN 607
           I   C  N
Sbjct: 378 ISTLCKEN 385


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 148/578 (25%), Positives = 268/578 (46%), Gaps = 27/578 (4%)

Query: 46  NNPTPAIQFFKWT---HNCVSSPNIA-QLIHVLLQSDMRDVA-SHVFDKMVIQFGKTYNF 100
           N P   ++F+ W     + + S  I+  +IHVL+ S   D A S + + M +        
Sbjct: 94  NTPQLVLEFYNWVGEKKSVLHSLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSPLEV 153

Query: 101 FRLFRDSLGDFGCDYSF---LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
                +S G    +++    L+    +IG    + E+   +   G +++       +S L
Sbjct: 154 LEALNNSYGICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHL 213

Query: 158 VDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI 213
           +  N + +++ + + M   G+      +  +++ L +   ++ A  +  ++++ G  PN+
Sbjct: 214 IKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNV 273

Query: 214 VTCNKILKRLCINGQIGNASSL---FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           VT N ++   C  G +  A  L    +++     KPN VT+++LI+ FCK   +  A +L
Sbjct: 274 VTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEEL 333

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
            N MM++D+ P++  Y+ +I+G  +AG L+E   L    ++RGL  + VV++S+M     
Sbjct: 334 RNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYM 393

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            GDV  A   +  M +     +  + SIL +GLC+ G +  A     QVL   L     +
Sbjct: 394 EGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFS 453

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSV 445
           ++ LI+  CKS        L   M  RGL PD V    LI+G   +     A++ + + V
Sbjct: 454 HNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMV 513

Query: 446 RMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +    PNL ++N++++G C+   +  A   V +   MG+     D IT+  LI G  + G
Sbjct: 514 KGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLV----DTITYNTLINGYFNCG 569

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
               A  L   M   G+     TY+ +I  L K   +     +  +M   GV PD   Y 
Sbjct: 570 KFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYR 629

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            L+  + K C+ +  ++L   +  +G+ PD +TY  I+
Sbjct: 630 TLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIV 667



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 212/447 (47%), Gaps = 42/447 (9%)

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
           ++   Y +C +       V++ L+    + G    A  + +++   G    I   N  L 
Sbjct: 156 ALNNSYGICESNHA----VFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLS 211

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            L    +I     ++  ++  G   NV TF+ +++A CK+ KL++A  ++  +++  + P
Sbjct: 212 HLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWP 271

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +++ +++++DG  K G +           D  LKL                     V+  
Sbjct: 272 NVVTFNMMVDGACKMGDM-----------DLALKL---------------------VRKM 299

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + M  G   PN ++Y+ LI G C+ G +  A  L  +++   +EP++ TY+++I+G+ ++
Sbjct: 300 EIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRA 359

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIP-NLFIF 456
           G L +   L D M++RGL P++VV + +++ L      D     F  +    IP + F  
Sbjct: 360 GCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTC 419

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           + L  G CR    T  +K    +   N+  D  +H +LI  +    + ++A  L  +M  
Sbjct: 420 SILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYV 479

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           RGL PDV+T+  +I G  K  NI   + ++  M +    P++ +YN ++N L K+  +D 
Sbjct: 480 RGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDV 539

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGY 603
           A  L   L   GL  D ITYNT+I GY
Sbjct: 540 ARSLVDVLQRMGL-VDTITYNTLINGY 565



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 183/389 (47%), Gaps = 34/389 (8%)

Query: 220 LKRLCIN-GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           L R C   G    A  +   L + G    +  ++  ++   K  ++ + + +Y  M+   
Sbjct: 174 LVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYG 233

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA- 337
            + ++  +++++  L K  +L+E   +    L  G+  +VV F+ ++D    +GD+  A 
Sbjct: 234 YMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLAL 293

Query: 338 --VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
             V+  + M  G   PN ++Y+ LI G C+ G +  A  L  +++   +EP++ TY+++I
Sbjct: 294 KLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMI 353

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
           +G+ ++G L +   L D M++RGL                              +PN  +
Sbjct: 354 EGYSRAGCLEEALRLCDEMVERGL------------------------------LPNSVV 383

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           +N++M              +F  M    I  D  T ++L RG+   G +++A+    Q+L
Sbjct: 384 YNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVL 443

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           +  L  D  +++ +I+ L K  N +    +   M   G+ PD+  +  L++   KE N++
Sbjct: 444 ENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIE 503

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +A++++ ++     +P+++ YN+II G C
Sbjct: 504 SAVQVYDKMVKGEEKPNLLVYNSIINGLC 532



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/481 (22%), Positives = 215/481 (44%), Gaps = 83/481 (17%)

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI-------GNASSLFDVLLLV 242
           RK  +E +FH+ + ++      N ++ + +L+ +C+N +         N +SL + L+  
Sbjct: 34  RKCFLERSFHLGKSIL------NPISDDVVLRAICVNLKQRRWNFLEKNLASLTNALV-- 85

Query: 243 GPKPNVVTFSTLINAFCKEAKL---------EKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
                    S ++  F    +L         EK   L++L +   ++  L+      D L
Sbjct: 86  ---------SRVVCEFRNTPQLVLEFYNWVGEKKSVLHSLEISCSVIHVLVNSRRYDDAL 136

Query: 294 FKAGRLKEGNEL----LLTALDRGLKL---DVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
              G L   N L    +L AL+    +   +  VF +++ A   IG    A +   ++  
Sbjct: 137 SLMGNLMTVNGLSPLEVLEALNNSYGICESNHAVFDALVRACTQIGATVGACEVIKKLQI 196

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G    + +++  +  L +   +     ++ +++      ++ T++ ++   CK  KL++
Sbjct: 197 EGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQE 256

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMT---LIPNLFIFNT 458
             S++  ++K G+ P+ V  +++++G   MGD   AL+   +   M+   + PN   +N+
Sbjct: 257 ALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNS 316

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+DG C++   T   +L   M   +I+P+V T+  +I G +  G L  A+ L  +M++RG
Sbjct: 317 LIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERG 376

Query: 519 LTPDVITYSAIIH-----------------------------------GLFKGKNISVGL 543
           L P+ + Y++I+H                                   GL +   I+  L
Sbjct: 377 LLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTAL 436

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
                +  N +  D   +N+L+N L K  N  AA +L  ++  RGL PD++T+ T+I G+
Sbjct: 437 KFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGH 496

Query: 604 C 604
           C
Sbjct: 497 C 497



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/243 (20%), Positives = 111/243 (45%), Gaps = 30/243 (12%)

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDN-MIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
           SL    S+I     S +  D  SL  N M   GL P  V+ +L  N   G          
Sbjct: 115 SLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSPLEVLEAL--NNSYG---------- 162

Query: 446 RMTLIPNLFIFNTLMDGCCRLKR---ATDTVKLFMLMGMY---NIKPDVITHTVLIRGIA 499
                 N  +F+ L+  C ++     A + +K   + G +   +   + ++H + +  I 
Sbjct: 163 --ICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEI- 219

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
                    +++ +M+  G   +V T++ ++H L K   +   L +F  + ++G+ P++ 
Sbjct: 220 -----HRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVV 274

Query: 560 IYNVLLNMLIKECNLDAALKLFGQL---TDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
            +N++++   K  ++D ALKL  ++   +   ++P+ +TYN++I G+C +    +    +
Sbjct: 275 TFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELR 334

Query: 617 SQI 619
           +++
Sbjct: 335 NEM 337


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 214/427 (50%), Gaps = 10/427 (2%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVI---QRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
           +  ++N +++ G  + A   +  V+       +PN+++ N I+K +C  G + NA  LF 
Sbjct: 146 FNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFR 205

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            + +    P+  T+ TL++  CK  ++++A  L + M      P    +++LI+GL K G
Sbjct: 206 EMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKG 265

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
                 +L+     +G   + V +++++      G + +A+   DRM++   +PN ++Y 
Sbjct: 266 DFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYG 325

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            +I GL +QGR ++   +   +  R    +   YS L+ G  K GK  +   L+   + +
Sbjct: 326 TIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDK 385

Query: 418 GLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           G K + V+ S L++GL  D     A++   +       PN F F++LM G   +  +   
Sbjct: 386 GCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKA 445

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           ++++  M   N   + + ++VLI G+   G +  A++++ +ML  G  PDV+ YS++I G
Sbjct: 446 IEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQG 505

Query: 533 LFKGKNISVGLHMFKLME--RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           L    ++   L ++  M        PD+  YN+L N L K+ ++  A+ L   + DRG +
Sbjct: 506 LCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCD 565

Query: 591 PDIITYN 597
           PD++T N
Sbjct: 566 PDLVTCN 572



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 187/370 (50%), Gaps = 7/370 (1%)

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PNV++F+ +I + CK   ++ A +L+  M     VPD   Y  L+DGL K  R+ E   L
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L      G       F+ +++     GD  R  +  D M   G +PN ++Y+ LI GLC 
Sbjct: 239 LDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 298

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G+L +A  L  +++  +  P+ +TY ++I+G  K G+  DG  +   M +RG   +  V
Sbjct: 299 KGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYV 358

Query: 426 CSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            S+L++GL  +     A+R F +S+      N  +++ L+DG CR ++  + +K+   M 
Sbjct: 359 YSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMT 418

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
                P+  T + L++G    G+   AI ++  M K     + + YS +IHGL K   + 
Sbjct: 419 DKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVM 478

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL--TDRGLEPDIITYNT 598
             + ++  M   G  PD+  Y+ ++  L    +++ ALKL+ ++   +   +PD+ITYN 
Sbjct: 479 EAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNI 538

Query: 599 IICGYCSLNS 608
           +    C  +S
Sbjct: 539 LFNALCKQSS 548



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 226/492 (45%), Gaps = 50/492 (10%)

Query: 44  KTNNPTPAIQ-FFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQFGKTYN 99
           K + P  AI+ F++ +      P +     +++V++Q+   D A   ++ +V    K  N
Sbjct: 119 KAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVV--GAKDMN 176

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
              +  + L      ++ +I++  ++G +D ++E+F  M              LM  L  
Sbjct: 177 ---ILPNVLS-----FNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCK 228

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
            + + +   L   M+ +G       +  L+NGL +KG       +   +  +G VPN VT
Sbjct: 229 VDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVT 288

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            N ++  LC+ G++  A SL D ++     PN VT+ T+IN   K+ +     ++  LM 
Sbjct: 289 YNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLME 348

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           E   + +  +YS+L+ GLFK G+ +E   L   ++D+G KL+ V++S+++D         
Sbjct: 349 ERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPD 408

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
            A++    M + G  PN  ++S L+KG  + G   +A  ++  +       + + YS LI
Sbjct: 409 EAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLI 468

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
            G CK GK+ +   ++  M+  G +PD V  S +I GL                      
Sbjct: 469 HGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGL---------------------- 506

Query: 456 FNTLMDGCCRLKRATDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
                   C      + +KL+  ML    + +PDVIT+ +L   +  Q S+S A+ L   
Sbjct: 507 --------CDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNS 558

Query: 514 MLKRGLTPDVIT 525
           ML RG  PD++T
Sbjct: 559 MLDRGCDPDLVT 570



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 181/392 (46%), Gaps = 14/392 (3%)

Query: 226 NGQIGNASSLFDVLLLVGPKPNVV-----TFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
           NG    +S + D +    PK         TF +LI  +   +      ++ N M   + V
Sbjct: 45  NGSEPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENRV 104

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLT-ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
                + ++     KA    +  EL    + +   K  V  F+SV++  +  G   RA++
Sbjct: 105 FSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALE 164

Query: 340 TYDRMLNG---GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
            Y+ ++       LPNV+S++++IK +C+ G +  A  LF ++ +R+  P   TY +L+D
Sbjct: 165 FYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMD 224

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMTL---IP 451
           G CK  ++ +  SL D M   G  P     ++LINGL   GD  R       M L   +P
Sbjct: 225 GLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVP 284

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N   +NTL+ G C   +    + L   M      P+ +T+  +I G+  QG       + 
Sbjct: 285 NEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVL 344

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             M +RG   +   YS ++ GLFK       + +FK     G   +  +Y+ L++ L ++
Sbjct: 345 VLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRD 404

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
              D A+K+  ++TD+G  P+  T+++++ G+
Sbjct: 405 RKPDEAMKILSEMTDKGCAPNAFTFSSLMKGF 436


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 150/581 (25%), Positives = 267/581 (45%), Gaps = 40/581 (6%)

Query: 39  LANLI-KTNNPTPAIQFFKWTHNCVSSPNIAQ-------LIHVLLQSDMRDVASHVFDKM 90
           +A+LI +  + + A+Q F+W  N    PN          LIH L      +    V D+M
Sbjct: 97  IAHLILEQKSASQALQTFRWASNL---PNFIHNQSTYRALIHKLCSFRRFETVKEVLDEM 153

Query: 91  VIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
               G   +      +S+      +  ++    R   + + +++   ++  G   S  + 
Sbjct: 154 PSSIGSPPD------ESI------FVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIF 201

Query: 151 QRLMSCLV--DSNSVGQYYKLCRAMRGKGFCVYEF--LMNGLLRKGVIENAFHMHRQVIQ 206
             ++  LV  D +   ++Y+    M G     Y F  LM GL     I +AF + + +  
Sbjct: 202 NSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKS 261

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
           RG  PN V  N ++  LC NG++G A SL + ++    +P+ VTF+ LI+A+C+E  L +
Sbjct: 262 RGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMV----EPSDVTFNVLISAYCQEENLVQ 317

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A  L      M  VPD++  + ++  L KAGR+ EG E+L      G  +DVV +++++ 
Sbjct: 318 ALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIK 377

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            +  +G      +    M   G LPNV +Y+IL  G C  G L  A  LF  +    +  
Sbjct: 378 GFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINW 437

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIK-RG-----LKP-DAVVCSLLINGLMGDALR 439
           + +TY +LI G C  G++ DGF + + M + RG     + P ++++  L       +AL 
Sbjct: 438 NFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALE 497

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
           F  +  +  L P     +  + G C      D  +++  M      P V+ +  LI G  
Sbjct: 498 FLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFC 555

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
             G++  A  L  +M+  G  P   T++A+I        +   L + + M   G  PD+ 
Sbjct: 556 QDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMG 615

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            Y+ +++ L  + +   A++LF Q+ ++ + PD  T+N+++
Sbjct: 616 SYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 656



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 158/361 (43%), Gaps = 37/361 (10%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLM-MEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           N  T+  LI+  C   + E   ++ + M   +   PD  I+  ++ GL +A  +++  ++
Sbjct: 126 NQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKV 185

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY-DRMLNGGFLPNVISYSILIKGLC 364
           L      G    + +F+S++D  V   D+  A + Y  +M+  G   +  ++ IL+KGLC
Sbjct: 186 LDLITKFGENPSLKIFNSILDVLVK-EDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLC 244

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
              R+ +A  L   +  R   P+ + Y+++I   CK+GK+    SL + M++        
Sbjct: 245 LTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE-------- 296

Query: 425 VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
                                     P+   FN L+   C+ +     + L         
Sbjct: 297 --------------------------PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGF 330

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PDV+T T ++  +   G ++  + +  ++   G   DV+ Y+ +I G        VG  
Sbjct: 331 VPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHR 390

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + K ME  G  P++  YN+L +       LD+A+ LF  +   G+  + +TY+T+I G C
Sbjct: 391 VLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLC 450

Query: 605 S 605
           S
Sbjct: 451 S 451



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/283 (20%), Positives = 122/283 (43%), Gaps = 11/283 (3%)

Query: 336 RAVQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR-RLEPSLLTYSS 393
           +A+QT+    N   F+ N  +Y  LI  LC   R      +  ++       P    + +
Sbjct: 109 QALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVT 168

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD----ALRFFFQSVRMTL 449
           ++ G  ++  +R    + D + K G  P   + + +++ L+ +    A  F+ + + M  
Sbjct: 169 IVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNG 228

Query: 450 IP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           +  + + F  LM G C   R  D  KL  +M      P+ + +  +I  +   G +  A 
Sbjct: 229 VSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRAR 288

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  +M++    P  +T++ +I    + +N+   L + +     G  PD+     ++ +L
Sbjct: 289 SLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGIL 344

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLI 611
            K   +   +++  ++   G   D++ YNT+I G+C L    +
Sbjct: 345 CKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKV 387


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 134/550 (24%), Positives = 252/550 (45%), Gaps = 53/550 (9%)

Query: 99   NFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
            +F  ++R  L      ++ L+  + R G I E+     YMS M I  +        +C++
Sbjct: 456  HFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFN----SVSFNCII 511

Query: 159  DS--------NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
            DS         +   Y  + R       C Y+ L+ GL + G +  A      ++     
Sbjct: 512  DSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSA 571

Query: 211  PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
             +  T N +L  +C  G +  A  + + ++     P++ T++ L++ FC++ K+  A  +
Sbjct: 572  VDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVM 631

Query: 271  YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYV 329
              +M+E  +VPD + Y+ L++GL   G++K  + +    +   GL  D + ++S+M+ Y+
Sbjct: 632  LQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYL 691

Query: 330  GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
              G+V    +    M      PN  SY+IL+ G  ++G+  ++  L+  ++ + + P  +
Sbjct: 692  KGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNV 751

Query: 390  TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF--- 441
            TY  LI G  + G +       + M+  G+ PD +V  +LI        M +ALR F   
Sbjct: 752  TYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCM 811

Query: 442  --------------------------------FQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
                                             + +++ L PN   +  L++  CR+   
Sbjct: 812  KCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEI 871

Query: 470  TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
                +L   M    I P  +  + +IRG+   G L  A+++F  M++ G+ P V T++ +
Sbjct: 872  DRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTL 931

Query: 530  IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            +H L K   I+  LH+ +LME   +  D+  YNVL+  L K+ ++  AL L+G++  +GL
Sbjct: 932  MHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGL 991

Query: 590  EPDIITYNTI 599
             P++ TY T+
Sbjct: 992  WPNVTTYITL 1001



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/548 (22%), Positives = 251/548 (45%), Gaps = 45/548 (8%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           F  + R +L      Y+ +I+ Y R  +ID+++ + + M   G+  S      L++    
Sbjct: 282 FNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCK 341

Query: 160 SNSVGQYYKLCRAMRGKGFCVYE----FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
            + +G    L   ++ +G  + +     L++G  + G I  A  + + +++ G  P++VT
Sbjct: 342 VSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVT 401

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            + ++  +C   ++     +   +   G  PN V ++TLI  +CK   ++ A + +  + 
Sbjct: 402 YSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIY 461

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
              LV + +I++ L+   ++ G + E            +  + V F+ ++D+Y   G + 
Sbjct: 462 RRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIV 521

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV------------------------- 370
            A   YD M+  G  PNV +Y  L++GLCQ G LV                         
Sbjct: 522 EAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALL 581

Query: 371 ----------EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
                     EA  +  +++     P + TY+ L+ GFC+ GK+     +   M+++G+ 
Sbjct: 582 LGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVV 641

Query: 421 PDAVVCSLLINGLMGD----ALRFFFQSV--RMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           PD V  + L+NGL+ +    A  + FQ +  +  L  +   +N+LM+G  +        +
Sbjct: 642 PDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKR 701

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M    + P+  ++ +L+ G   +G  S ++ L+  M+++G+ PD +TY  +I GL 
Sbjct: 702 MMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLS 761

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +   I + +   + M   G+ PD  ++++L+    ++  +  AL+LF  +    L P   
Sbjct: 762 ECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSK 821

Query: 595 TYNTIICG 602
           T++ +I G
Sbjct: 822 TFSAMING 829



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/601 (22%), Positives = 260/601 (43%), Gaps = 84/601 (13%)

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           +F K  +  +  +         Y+ ++  YV+ G+   ++ +   M    I         
Sbjct: 170 EFRKAEDMLQKMKSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNI 229

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           ++  L       + + L + MR        C Y  L+NG   +G I +A  +   ++++ 
Sbjct: 230 MIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQT 289

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
            VP++ T   ++   C N +I  A S+   + + G  P+ +T+S L+N +CK + L  A 
Sbjct: 290 LVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPAL 349

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            L   +    +  +  + +ILIDG  + G + +  ++L + L+ G+  DVV +S++++  
Sbjct: 350 DLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGM 409

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             +  +    +   RM   G LPN + Y+ LI   C+ G +  A   F  +  R L  + 
Sbjct: 410 CRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANP 469

Query: 389 LTYSSL-----------------------------------IDGFCKSGKLRDGFSLYDN 413
           + +++L                                   ID +C  GK+ + FS+YD+
Sbjct: 470 VIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDD 529

Query: 414 MIKRGLKPDAVVCSLLINGL---------------------------------------- 433
           M++ G  P+      L+ GL                                        
Sbjct: 530 MVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGT 589

Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           + +AL    + V+   +P++  +  L+ G CR  +    + +  +M    + PD + +T 
Sbjct: 590 LDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTC 649

Query: 494 LIRGIASQGSLSSAILLFFQML-KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           L+ G+ ++G + +A  +F +++ K GL  D I Y+++++G  KG N++    M   M +N
Sbjct: 650 LLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQN 709

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC-LI 611
            V P+ A YN+L++  +K      +L L+  +  +G+ PD +TY  +I G   L+ C LI
Sbjct: 710 EVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILG---LSECGLI 766

Query: 612 D 612
           D
Sbjct: 767 D 767



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/547 (22%), Positives = 246/547 (44%), Gaps = 47/547 (8%)

Query: 71  IHVLLQSDMRDVASHVFDKMVIQ-FGKTYNFFRLFR-----DSLGDFGCDYSFLIENYVR 124
           + +L+Q+ M   A  V   + +  F  T  F  L R     DS       +  LI+ YV+
Sbjct: 40  VRILIQAQMHSQAMSVLKHLAVTGFSCTAIFTSLLRIISRFDSTNHVV--FELLIKAYVK 97

Query: 125 IGKI-DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
             K+ D +V +F +M D G   SP     ++  LV+               G+   V+ F
Sbjct: 98  ERKVLDAAVAVF-FMDDCGFKASPVACNSILKALVEE--------------GESKYVWLF 142

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L                 R+ + R F  ++ TCN +L  LC NG+   A  +   +    
Sbjct: 143 L-----------------RESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCC 185

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
              N  T++T+++ + K+ + + A  +   M    +  D+  Y+I+ID L +  R     
Sbjct: 186 L-SNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAF 244

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            LL       L  D   ++++++ + G G +  A   ++ ML    +P+V +Y+ +I G 
Sbjct: 245 LLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGY 304

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C+  R+ +A  +  ++ I  + PS LTYS+L++G+CK   L     L  ++  RG+  + 
Sbjct: 305 CRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINK 364

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            +C++LI+G      +  A +     +   + P++  ++ L++G CR+ +  +T ++   
Sbjct: 365 TMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSR 424

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    I P+ + +T LI      G +  A+  F  + +RGL  + + ++A++   ++   
Sbjct: 425 MQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGM 484

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           I+   H  + M R  ++ +   +N +++       +  A  ++  +   G  P++ TY  
Sbjct: 485 ITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQN 544

Query: 599 IICGYCS 605
           ++ G C 
Sbjct: 545 LLRGLCQ 551



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 207/448 (46%), Gaps = 37/448 (8%)

Query: 115  YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
            Y+ L+  + R GKI  ++ +   M + G+   PD V                        
Sbjct: 612  YTILLSGFCRKGKILPALVMLQMMLEKGVV--PDTV------------------------ 645

Query: 175  GKGFCVYEFLMNGLLRKGVIENAFHMHRQVI-QRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  Y  L+NGL+ +G ++ A ++ +++I + G   + +  N ++      G +    
Sbjct: 646  -----AYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIK 700

Query: 234  SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
             +   +      PN  +++ L++ + K  +  K+  LY  M+   + PD + Y +LI GL
Sbjct: 701  RMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGL 760

Query: 294  FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
             + G +    + L   +  G+  D +VF  ++ ++     +  A++ ++ M      P+ 
Sbjct: 761  SECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSS 820

Query: 354  ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
             ++S +I GL ++  L ++  +  ++L   L+P+   Y +L++  C+ G++   F L + 
Sbjct: 821  KTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEE 880

Query: 414  MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            M   G+ P  V  S +I GL     + +A+  F   +R  ++P +  F TLM   C+  +
Sbjct: 881  MKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESK 940

Query: 469  ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
              D + L  LM +  +K DV+++ VLI G+     +S A+ L+ +M  +GL P+V TY  
Sbjct: 941  IADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYIT 1000

Query: 529  IIHGLFKGKNISVGLHMFKLMERNGVAP 556
            +   ++    +  G  + + +E  G+ P
Sbjct: 1001 LTGAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 137/313 (43%), Gaps = 15/313 (4%)

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           LL  + R    + VVF  ++ AYV    V  A      M + GF  + ++ + ++K L +
Sbjct: 73  LLRIISRFDSTNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVE 132

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
           +G          + L R+    + T + L++  C +G+ R    +   M    L   A  
Sbjct: 133 EGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLSNSATY 192

Query: 426 CSLL----INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
            ++L      G    AL       R ++  +++ +N ++D  CR+KR+     L   M  
Sbjct: 193 NTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRK 252

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
            ++ PD  T+  LI G   +G ++ A  +F  ML++ L P V TY+ +I G  + + I  
Sbjct: 253 DDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDK 312

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L +   ME  GV P    Y+ LLN   K   L  AL L   L  RG     IT N  +C
Sbjct: 313 ALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRG-----ITINKTMC 367

Query: 602 GYCSLNSCLIDGY 614
                 + LIDG+
Sbjct: 368 ------TILIDGF 374



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 152/342 (44%), Gaps = 27/342 (7%)

Query: 24   KTHISDLQFNQA-------NAILANLIKTNNPTPAIQFFKW-THNCVSSPNIAQ--LIHV 73
            K  +SD+  N+        N ++   +K    + ++  +K+     +   N+    LI  
Sbjct: 700  KRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILG 759

Query: 74   LLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVE 133
            L +  + D+A    +KMV++         +F D L      +  LI ++    K+  ++ 
Sbjct: 760  LSECGLIDIAVKFLEKMVLE--------GIFPDKLV-----FDILITSFSEKSKMHNALR 806

Query: 134  IFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLL 189
            +F  M  + +  S      +++ L+  N + Q +++   M   G       Y  L+N   
Sbjct: 807  LFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKC 866

Query: 190  RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
            R G I+ AF +  ++   G VP  V  + I++ LC  G++  A  +F  ++  G  P V 
Sbjct: 867  RVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVA 926

Query: 250  TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            TF+TL+++ CKE+K+  A  L  LM    L  D++ Y++LI GL K   + +  +L    
Sbjct: 927  TFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEM 986

Query: 310  LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
              +GL  +V  + ++  A    G +    +  + +   G +P
Sbjct: 987  KSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 133/301 (44%), Gaps = 7/301 (2%)

Query: 93   QFGKTYNFFR-LFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
            QF K+   ++ + R  +      Y  LI      G ID +V+    M   GI+    +  
Sbjct: 730  QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFD 789

Query: 152  RLMSCLVDSNSVGQYYKLCRAMR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
             L++   + + +    +L   M+          +  ++NGL+RK  ++ +  +  +++Q 
Sbjct: 790  ILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQV 849

Query: 208  GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
            G  PN      ++   C  G+I  A  L + +  +G  P  V  S++I   C+  KLE+A
Sbjct: 850  GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEA 909

Query: 268  FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL-LLTALDRGLKLDVVVFSSVMD 326
              +++ MM   +VP +  ++ L+  L K  ++ +   L  L  L R LK+DVV ++ ++ 
Sbjct: 910  VIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCR-LKVDVVSYNVLIT 968

Query: 327  AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                   +  A+  Y  M + G  PNV +Y  L   +   GR+     L   +  R L P
Sbjct: 969  GLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028

Query: 387  S 387
            +
Sbjct: 1029 A 1029


>gi|255661018|gb|ACU25678.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 376

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 187/354 (52%), Gaps = 6/354 (1%)

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C+   ++ A  +Y  ++E ++ PD ++Y+ +++G FK GR+K+  EL       G + +V
Sbjct: 1   CESGDIDAAKMVYKEIVESEVSPDAVVYNAMLNGFFKVGRIKDCFELWELMGKEGGR-NV 59

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
             F+ +M      G V   +  ++ M   GF+ + I+Y IL+ GLC+ G + ++  +   
Sbjct: 60  ASFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGLCKNGDINKSLHMLEI 119

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG--- 435
             ++        YS++I+  CK  KL    S+ + MIK G  P+A V + LINGL+G   
Sbjct: 120 AEVKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMIKXGCMPNAHVYNALINGLVGASK 179

Query: 436 --DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             DA+R F +       P +  +NTL++G C+ +R  +   L   M      P VIT+++
Sbjct: 180 FEDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFGEAYDLVKEMLEKGWNPCVITYSL 239

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI+G+     +  A+ L+ Q++ +G  PDV  ++ +IHGL       + L ++  M R  
Sbjct: 240 LIKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWN 299

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            AP++  +N L+    K+ ++  AL  + ++   G++PDII+YN  + G CS N
Sbjct: 300 CAPNLVTHNTLMZGFYKDGDIRNALATWARILRNGVQPDIISYNITLKGLCSCN 353



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 178/351 (50%), Gaps = 6/351 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  ++NG  + G I++ F +   + + G   N+ + N +++ L  NG++    S+++++
Sbjct: 27  VYNAMLNGFFKVGRIKDCFELWELMGKEGG-RNVASFNIMMRGLFDNGKVNEVISIWELM 85

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G   + +T+  L++  CK   + K+  +  +      V D   YS +I+ L K  +L
Sbjct: 86  KKSGFVEDSITYGILVHGLCKNGDINKSLHMLEIAEVKGGVLDAFAYSAMINWLCKDSKL 145

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   +L   +  G   +  V++++++  VG      A++ +  M N    P +I+Y+ L
Sbjct: 146 DKAVSVLNGMIKXGCMPNAHVYNALINGLVGASKFEDAIRVFQEMGNTHCSPTIITYNTL 205

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+  R  EA  L  ++L +   P ++TYS LI G C   K+     L++ +I +G 
Sbjct: 206 INGLCKAERFGEAYDLVKEMLEKGWNPCVITYSLLIKGLCLGRKVEMALHLWNQVINKGF 265

Query: 420 KPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KPD  + ++LI+GL  +G    AL  +F   R    PNL   NTLM+G  +     + + 
Sbjct: 266 KPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWNCAPNLVTHNTLMZGFYKDGDIRNALA 325

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            +  +    ++PD+I++ + ++G+ S   +S AIL     L + + P +IT
Sbjct: 326 TWARILRNGVQPDIISYNITLKGLCSCNRISGAILFLHDALTKKIFPTIIT 376



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 172/348 (49%), Gaps = 10/348 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++  + ++G+I +  E++  M   G          +M  L D+  V +   +   M+
Sbjct: 28  YNAMLNGFFKVGRIKDCFELWELMGKEGGRNVASF-NIMMRGLFDNGKVNEVISIWELMK 86

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF      Y  L++GL + G I  + HM      +G V +    + ++  LC + ++ 
Sbjct: 87  KSGFVEDSITYGILVHGLCKNGDINKSLHMLEIAEVKGGVLDAFAYSAMINWLCKDSKLD 146

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+ + ++  G  PN   ++ LIN     +K E A +++  M      P +I Y+ LI
Sbjct: 147 KAVSVLNGMIKXGCMPNAHVYNALINGLVGASKFEDAIRVFQEMGNTHCSPTIITYNTLI 206

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL KA R  E  +L+   L++G    V+ +S ++        V  A+  +++++N GF 
Sbjct: 207 NGLCKAERFGEAYDLVKEMLEKGWNPCVITYSLLIKGLCLGRKVEMALHLWNQVINKGFK 266

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V  ++ILI GLC  G+   A  L+  +      P+L+T+++L++GF K G +R+  + 
Sbjct: 267 PDVQMHNILIHGLCSVGKTQLALSLYFDMNRWNCAPNLVTHNTLMZGFYKDGDIRNALAT 326

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           +  +++ G++PD +  ++ + GL     +  A+ F   ++   + P +
Sbjct: 327 WARILRNGVQPDIISYNITLKGLCSCNRISGAILFLHDALTKKIFPTI 374



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 131/281 (46%), Gaps = 41/281 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    +  K+D++V +   M   G   +  +   L++ LV ++      ++ + M 
Sbjct: 132 YSAMINWLCKDSKLDKAVSVLNGMIKXGCMPNAHVYNALINGLVGASKFEDAIRVFQEM- 190

Query: 175 GKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           G   C      Y  L+NGL +      A+ + ++++++G+ P ++T + ++K LC+  ++
Sbjct: 191 GNTHCSPTIITYNTLINGLCKAERFGEAYDLVKEMLEKGWNPCVITYSLLIKGLCLGRKV 250

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  L++ ++  G KP+V   + LI+  C   K + A  LY  M   +  P+L+ ++ L
Sbjct: 251 EMALHLWNQVINKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWNCAPNLVTHNTL 310

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++G +K G                                   D+  A+ T+ R+L  G 
Sbjct: 311 MZGFYKDG-----------------------------------DIRNALATWARILRNGV 335

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            P++ISY+I +KGLC   R+  A       L +++ P+++T
Sbjct: 336 QPDIISYNITLKGLCSCNRISGAILFLHDALTKKIFPTIIT 376


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 202/426 (47%), Gaps = 42/426 (9%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG-FVP 211
           ++  L  +    +  +L R M       Y  ++ G   +G ++ A  + R++ +RG   P
Sbjct: 47  MLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 106

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQL 270
           N  T   ++   C  G++  A  +FD +L  G  KP  V ++ LI  +C + KL+ A   
Sbjct: 107 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 166

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
            + M+E  +   +  Y++L+  LF  GR  E  EL+                        
Sbjct: 167 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV------------------------ 202

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
                      + M   G  P+V +Y+ILI G C++G + +A  +F  +  R +  +++T
Sbjct: 203 -----------EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 251

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSV 445
           Y+SLI    K G++++   L+D  ++RG++PD V+ + LIN     G +  A     +  
Sbjct: 252 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 311

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +  + P+   +NTLM G C L R  +  KL   M    I+PD++T+  LI G + +G + 
Sbjct: 312 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 371

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ +  +M+ +G  P ++TY+A+I GL K        +M K M  NG+ PD + Y  L+
Sbjct: 372 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 431

Query: 566 NMLIKE 571
             L  E
Sbjct: 432 EGLTTE 437



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 201/406 (49%), Gaps = 11/406 (2%)

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T N +L+ LC  G+   A  L   +    P+PN VT++T+I  FC   +++ A  +   
Sbjct: 42  TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 97

Query: 274 MMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYVGI 331
           M E   + P+   Y  +I G  K GR+ E  ++    L +G +K + V++++++  Y   
Sbjct: 98  MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G +  A+   DRM+  G    V +Y++L+  L   GR  EA  L  ++  + L P + TY
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVR 446
           + LI+G CK G ++    +++NM +RG++   V  + LI      G + +  + F ++VR
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             + P+L ++N L++            ++   M    I PD +T+  L+RG+   G +  
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L  +M KRG+ PD++TY+ +I G     ++   L +   M   G  P +  YN L+ 
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
            L K    D A  +  ++ + G+ PD  TY ++I G  + +   ID
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAID 443



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 175/344 (50%), Gaps = 11/344 (3%)

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           AF L+  M  + L      ++I++  L  AG+     ELL        + + V +++V+ 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 80

Query: 327 AYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR-RL 384
            +   G V  A+     M   GG  PN  +Y  +I G C+ GR+ EA  +F ++L +  +
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALR 439
           +P  + Y++LI G+C  GKL       D M++RG+       +LL++ L  D     A  
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              +     L P++F +N L++G C+       +++F  M    ++  V+T+T LI  ++
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G +     LF + ++RG+ PD++ Y+A+I+      NI     +   ME+  +APD  
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 320

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            YN L+  L     +D A KL  ++T RG++PD++TYNT+I GY
Sbjct: 321 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 364



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 160/305 (52%), Gaps = 21/305 (6%)

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L L    F+ ++      G   RA++   +M      PN ++Y+ +I G C +GR+  A 
Sbjct: 37  LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAAL 92

Query: 374 GLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG-LKPDAVVCSLLIN 431
            +  ++  R  + P+  TY ++I G+CK G++ +   ++D M+ +G +KP+AV+ + LI 
Sbjct: 93  DIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 152

Query: 432 GL-----MGDAL----RFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           G      +  AL    R   + V MT+   NL +    MDG     R T+  +L   MG 
Sbjct: 153 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG-----RGTEAYELVEEMGG 207

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             + PDV T+ +LI G   +G++  A+ +F  M +RG+   V+TY+++I+ L K   +  
Sbjct: 208 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 267

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
              +F    R G+ PD+ +YN L+N      N+D A ++ G++  + + PD +TYNT++ 
Sbjct: 268 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 327

Query: 602 GYCSL 606
           G C L
Sbjct: 328 GLCLL 332



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 186/367 (50%), Gaps = 36/367 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I  + ++G++DE+V++F  M   G  + P+ V                        
Sbjct: 111 YGTVISGWCKVGRVDEAVKVFDEMLTKG-EVKPEAV------------------------ 145

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                +Y  L+ G   +G ++ A     ++++RG    + T N ++  L ++G+   A  
Sbjct: 146 -----MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G  P+V T++ LIN  CKE  ++KA +++  M    +   ++ Y+ LI  L 
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G+++E ++L   A+ RG++ D+V+++++++++   G++ RA +    M      P+ +
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 320

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ L++GLC  GR+ EA  L  ++  R ++P L+TY++LI G+   G ++D   + + M
Sbjct: 321 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 380

Query: 415 IKRGLKP-----DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG-CCRLKR 468
           + +G  P     +A++  L  NG   DA     + V   + P+   + +L++G     +R
Sbjct: 381 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 440

Query: 469 ATDTVKL 475
           A D  +L
Sbjct: 441 AIDDERL 447


>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 903

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 220/424 (51%), Gaps = 11/424 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
           ++N   R G ++ A    +++    G   N+VTCN ++    + G +   + +  ++   
Sbjct: 231 VVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVEGMTRVLRLMSER 290

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G   NVVTF++LI ++CK+  +E+A Q++ L+ E  LVPD  ++ +LIDG  + GR+ + 
Sbjct: 291 GVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDA 350

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             +    ++ G++ +  + +S+++ Y   G +  A Q   RM +    P+  +Y+ L+ G
Sbjct: 351 VRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDG 410

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C+ G + EA  L G++  + + P+++TY+ L+ G+ + G   D  SL+  M+KRG+  +
Sbjct: 411 YCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTAN 470

Query: 423 AVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            + CS L+  L  +GD   A++ +   +   L+ +    N ++ G C++++  +  ++  
Sbjct: 471 EISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILD 530

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            + ++  KPDV T+  L  G  + G+L  A  +   M K+G+ P +  Y+ +I G FK K
Sbjct: 531 NVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYK 590

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           +++    +   +   G+ P +A Y  L+        +D A     ++ ++G     IT N
Sbjct: 591 HLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKG-----ITLN 645

Query: 598 TIIC 601
             IC
Sbjct: 646 VNIC 649



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 237/510 (46%), Gaps = 31/510 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  LI+ Y R G+I ++V +  YM +MG+  +  +   L++    S  + +  ++   M 
Sbjct: 334 HGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMN 393

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L++G  R G ++ A  +  ++ Q+  VP ++T N +LK     G   
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFH 453

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +  SL+ ++L  G   N ++ STL+ A  K    ++A +L+  ++   L+ D I  +++I
Sbjct: 454 DVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMI 513

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K  ++ E  E+L        K DV  + ++   Y  +G++  A    D M   G  
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIF 573

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P +  Y+ LI G  +   L +   L  ++  R L P++ TY +LI G+C  G +   ++ 
Sbjct: 574 PTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG-----------------DALRFFFQSVRMTLIPNL 453
              MI++G+  +  +CS + N L                   D L   +QS++  L P+ 
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFLEPS- 692

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
                    C + ++  ++V+      +  + P+ I + V I G+   G L+ A  LF  
Sbjct: 693 ------ATTCLKTQKIAESVENSTPKKL--LVPNNIVYNVAIAGLCKAGKLTDAQKLFSD 744

Query: 514 MLKRG-LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           +L      PD  TY+ +IHG     +I+   ++   M   G+ P+I  YN L+  L K  
Sbjct: 745 LLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLG 804

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           N+D A +L  +L  +G  P+ ITYNT+I G
Sbjct: 805 NVDRAQRLLRKLPQKGTTPNAITYNTLIDG 834



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 218/429 (50%), Gaps = 39/429 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ ++     KG+++NA H+   + + G +P++++CN +L  L   G+   A  ++D +
Sbjct: 157 VFDMILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALHVYDQM 216

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +     P+V T S ++NA+C+  K++KA        EMD                     
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAK---EMD--------------------- 252

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
              N L       GL+L+VV  +S+++ Y  IGDV    +    M   G   NV++++ L
Sbjct: 253 ---NSL-------GLELNVVTCNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTFTSL 302

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IK  C++G + EA  +F  V  ++L P    +  LIDG+C++G++ D   ++D MI+ G+
Sbjct: 303 IKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGV 362

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + +  +C+ LING      + +A +   +    +L P+   +NTL+DG CR     + +K
Sbjct: 363 RTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALK 422

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M    + P V+T+ +L++G +  G+    + L+  MLKRG+T + I+ S ++  LF
Sbjct: 423 LCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALF 482

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  +    + +++ +   G+  D    NV+++ L K   ++ A ++   +     +PD+ 
Sbjct: 483 KLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQ 542

Query: 595 TYNTIICGY 603
           TY  +  GY
Sbjct: 543 TYQALSHGY 551



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 229/486 (47%), Gaps = 44/486 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMS---CLVDSNSVGQYY---K 168
           Y+ L++ Y R G +DE++++   M         ++V  +M+    L   + +G ++    
Sbjct: 404 YNTLVDGYCRAGHVDEALKLCGRMC------QKEVVPTVMTYNILLKGYSRIGAFHDVLS 457

Query: 169 LCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           L + M  +G    E     L+  L + G  + A  +   V+ RG + + +T N ++  LC
Sbjct: 458 LWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLC 517

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
              ++  A  + D + +   KP+V T+  L + +     L++AF + + M +  + P + 
Sbjct: 518 KMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIE 577

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           +Y+ LI G FK   L +  +L++    RGL   V  + +++  +  IG + +A  T   M
Sbjct: 578 MYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +  G   NV   S +   L +  +  EAC L  ++         + +  L+ G+      
Sbjct: 638 IEKGITLNVNICSKIANSLFRLDKFDEACLLLQKI---------VDFDLLLPGY------ 682

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
                     +K  L+P A  C  L    + +++     + +  L+PN  ++N  + G C
Sbjct: 683 --------QSLKEFLEPSATTC--LKTQKIAESVE--NSTPKKLLVPNNIVYNVAIAGLC 730

Query: 465 RLKRATDTVKLFM-LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           +  + TD  KLF  L+      PD  T+T+LI G A  G ++ A  L  +M  +G+ P++
Sbjct: 731 KAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNI 790

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY+A+I GL K  N+     + + + + G  P+   YN L++ LIK  ++  A++L  +
Sbjct: 791 VTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEK 850

Query: 584 LTDRGL 589
           + ++GL
Sbjct: 851 MIEKGL 856



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 142/610 (23%), Positives = 257/610 (42%), Gaps = 99/610 (16%)

Query: 82  VASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDM 141
           VA HV+D+M+            F  S   F C  S ++  Y R GK+D+++  FA   D 
Sbjct: 208 VALHVYDQMIS-----------FEVSPDVFTC--SIVVNAYCRCGKVDKAMA-FAKEMDN 253

Query: 142 GIYLSPDLVQ---------------------RLMSCLVDSNSVGQYYKLCRAMRGKGFC- 179
            + L  ++V                      RLMS    S +V  +  L ++   KG   
Sbjct: 254 SLGLELNVVTCNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLME 313

Query: 180 ----VYEF---------------LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
               V+E                L++G  R G I +A  +H  +I+ G   N   CN ++
Sbjct: 314 EAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLI 373

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
              C +GQ+  A  +   +     KP+  T++TL++ +C+   +++A +L   M + ++V
Sbjct: 374 NGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVV 433

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P ++ Y+IL+ G  + G   +   L    L RG+  + +  S++++A   +GD   A++ 
Sbjct: 434 PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKL 493

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           ++ +L  G L + I+ +++I GLC+  ++ EA  +   V I R +P + TY +L  G+  
Sbjct: 494 WENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYN 553

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
            G L++ F++ D M K+G+ P   + + LI+G      +        +     L P +  
Sbjct: 554 VGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVAT 613

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF---- 511
           +  L+ G C +            M    I  +V   + +   +        A LL     
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIV 673

Query: 512 --------FQMLKRGLTPDVIT--------------------------YSAIIHGLFKGK 537
                   +Q LK  L P   T                          Y+  I GL K  
Sbjct: 674 DFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAG 733

Query: 538 NISVGLHMFK-LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
            ++    +F  L+  +   PD   Y +L++    + +++ A  L  ++  +G+ P+I+TY
Sbjct: 734 KLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTY 793

Query: 597 NTIICGYCSL 606
           N +I G C L
Sbjct: 794 NALIKGLCKL 803



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 121/266 (45%), Gaps = 28/266 (10%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI  +  IG ID++      M + GI L+ ++  ++ + L     + ++ + C  ++
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF---RLDKFDEACLLLQ 670

Query: 175 G--------KGF-CVYEFL---MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
                     G+  + EFL       L+   I  A  +     ++  VPN +  N  +  
Sbjct: 671 KIVDFDLLLPGYQSLKEFLEPSATTCLKTQKI--AESVENSTPKKLLVPNNIVYNVAIAG 728

Query: 223 LCINGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
           LC  G++ +A  LF  LL      P+  T++ LI+    +  + KAF L + M    ++P
Sbjct: 729 LCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIP 788

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +++ Y+ LI GL K G +     LL     +G   + + +++++D  +  GDV  A++  
Sbjct: 789 NIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLK 848

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQG 367
           ++M+  G          L++G  +QG
Sbjct: 849 EKMIEKG----------LVRGSYKQG 864



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 14/140 (10%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++G    G I  AF++  ++  +G +PNIVT N ++K LC  G +  A  L   L
Sbjct: 757 TYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKL 816

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G  PN +T++TLI+   K   + +A +L   M+E  LV           G +K G +
Sbjct: 817 PQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEKMIEKGLV----------RGSYKQGDV 866

Query: 300 KEGNELLLTALDRGLKLDVV 319
            +  E+    LD G+KL + 
Sbjct: 867 DKPKEV----LDPGVKLGIT 882


>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
 gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
          Length = 808

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 142/570 (24%), Positives = 266/570 (46%), Gaps = 52/570 (9%)

Query: 86  VFDKMVIQFGKTYNFFRLFRD--SLGDFGCDYS--FLIENYVRIGKIDESVEIFAYMSDM 141
            +D ++    K      +F++  S G    DYS   LI+   +  KI E++     +   
Sbjct: 185 TYDSLLYSLRKADVALEIFKEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKE 244

Query: 142 GIYLSPDLV-QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIEN 196
           G ++   +    LMS L +   +     +   M   G       Y  +++GL + G +  
Sbjct: 245 GKFIPLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSE 304

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AF++ + V + G   +IVTCN ++    ++G       + +++  +G +P++VT++ LI 
Sbjct: 305 AFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIA 364

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C+   +E+  ++   ++   +  +++ YS+LI+ LFK G   E   LL      GL+L
Sbjct: 365 GHCEGGDVEEGMKIRKDILGQGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLEL 424

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL-PNVISYSILIKGLCQQGRLVEACGL 375
           DV+ +S ++  Y  +G++GRA+Q ++ M +   + P  +++  ++ GLC++G L EA   
Sbjct: 425 DVIAYSILIHGYSKLGEIGRALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSY 484

Query: 376 FGQVLIRRLEPS-LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
             + +  + +PS ++ Y+ +IDG+ K G + +   LYD +I  G+ P  V C+ L+ G  
Sbjct: 485 L-ETIASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYC 543

Query: 434 -MGD--ALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
             GD      +F +++++ L+P    + TLMD      +    + LF  M    IKP+ +
Sbjct: 544 KFGDLHMAESYFTAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAV 603

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T++V+I+G+  Q     A  +   M   G   D I Y+ +I G  + ++      +++LM
Sbjct: 604 TYSVVIKGLCKQFMFHDAKNVLDDMCIEGFDADPIPYNTLIQGFCETQDAKNAFGVYELM 663

Query: 550 ERNGVAPDIAIYNVLLNMLIK-------ECNLDA-------------------------- 576
              GV P    YN+L+N+L         E  L++                          
Sbjct: 664 VFRGVMPTPVTYNLLVNVLCSKGLVIHAEMQLESFRKQGAKLRKFAYITLIKAQCAKGMP 723

Query: 577 --ALKLFGQLTDRGLEPDIITYNTIICGYC 604
             A+  FG+L D G E  I  ++  I   C
Sbjct: 724 YKAIMWFGKLLDAGFEASIEDFSAAINRLC 753



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 233/512 (45%), Gaps = 59/512 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    +IG + E+  IF  +++ G+ L       L++         +  K+   MR
Sbjct: 289 YSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMR 348

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G G       Y  L+ G    G +E    + + ++ +G   NIVT + ++  L   G   
Sbjct: 349 GLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIVTYSVLINALFKKGLFY 408

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV-PDLIIYSIL 289
              +L   +  VG + +V+ +S LI+ + K  ++ +A Q++NLM     V P  + +  +
Sbjct: 409 EVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLMCSSQRVTPTSVNHVSI 468

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           + GL K G L E    L T   +    DVV+++ V+D Y  +GD+G AVQ YD ++  G 
Sbjct: 469 LLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGM 528

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P +++ + L+ G C+ G L  A   F  + +  L P+ +TY++L+D   ++GK+    S
Sbjct: 529 CPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLS 588

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL------------IPNLFIFN 457
           L+  M  +G+KP+AV  S++I GL     +F F   +  L            IP    +N
Sbjct: 589 LFKEMTGKGIKPNAVTYSVVIKGL---CKQFMFHDAKNVLDDMCIEGFDADPIP----YN 641

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG-------SLSS---- 506
           TL+ G C  + A +   ++ LM    + P  +T+ +L+  + S+G        L S    
Sbjct: 642 TLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKGLVIHAEMQLESFRKQ 701

Query: 507 ------------------------AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
                                   AI+ F ++L  G    +  +SA I+ L K +     
Sbjct: 702 GAKLRKFAYITLIKAQCAKGMPYKAIMWFGKLLDAGFEASIEDFSAAINRLCKRQFTKEA 761

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
           L +  +M   GV PD+ +Y VL   + K+  L
Sbjct: 762 LMLVPIMLSVGVYPDVELYRVLGTAVQKKNEL 793



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 139/573 (24%), Positives = 262/573 (45%), Gaps = 86/573 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +  L  +Y R     +++ + + MS + + +S      L+  L  ++   + +K    M 
Sbjct: 151 WDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSLRKADVALEIFK---EME 207

Query: 175 GKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRG-FVPNIVTCNKILKRLCINGQI 229
             G    ++    L++GL ++  I  A    +++ + G F+P  +T N ++  LC  G I
Sbjct: 208 SCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWGFI 267

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM----MEMDLV----- 280
            +A S+F ++L  G  P+  T+ST+I+  CK   + +AF ++  +    ME+D+V     
Sbjct: 268 QDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSL 327

Query: 281 --------------------------PDLIIYSILIDGLFKAGRLKEGNEL--------- 305
                                     PD++ Y+ILI G  + G ++EG ++         
Sbjct: 328 INGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGM 387

Query: 306 ---------LLTALDR-----------------GLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
                    L+ AL +                 GL+LDV+ +S ++  Y  +G++GRA+Q
Sbjct: 388 ELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQ 447

Query: 340 TYDRMLNGG-FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS-LLTYSSLIDG 397
            ++ M +     P  +++  ++ GLC++G L EA     + +  + +PS ++ Y+ +IDG
Sbjct: 448 VWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYL-ETIASKYQPSDVVLYNVVIDG 506

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD--ALRFFFQSVRMT-LIPN 452
           + K G + +   LYD +I  G+ P  V C+ L+ G    GD      +F +++++ L+P 
Sbjct: 507 YAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPT 566

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
              + TLMD      +    + LF  M    IKP+ +T++V+I+G+  Q     A  +  
Sbjct: 567 TVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLD 626

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            M   G   D I Y+ +I G  + ++      +++LM   GV P    YN+L+N+L  + 
Sbjct: 627 DMCIEGFDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKG 686

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
            +  A         +G +     Y T+I   C+
Sbjct: 687 LVIHAEMQLESFRKQGAKLRKFAYITLIKAQCA 719



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 165/367 (44%), Gaps = 10/367 (2%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           N + +  L N++ +      A  + + M  +++   +  Y  L+  L KA       E+ 
Sbjct: 147 NSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSLRKA---DVALEIF 203

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML-NGGFLPNVISYSILIKGLCQ 365
                 G+       S ++D       +G A+     +   G F+P  ++++ L+  LC 
Sbjct: 204 KEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCN 263

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G + +A  +F  +L   L PS  TYS++I G CK G + + F+++ ++ + G++ D V 
Sbjct: 264 WGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVT 323

Query: 426 CSLLINGL-MGDALRFFFQSVRMT----LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
           C+ LING  +    R   + + M     + P++  +  L+ G C      + +K+   + 
Sbjct: 324 CNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDIL 383

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              ++ +++T++VLI  +  +G       L  ++   GL  DVI YS +IHG  K   I 
Sbjct: 384 GQGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIG 443

Query: 541 VGLHMFKLM-ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
             L ++ LM     V P    +  +L  L K+  LD A      +  +    D++ YN +
Sbjct: 444 RALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVV 503

Query: 600 ICGYCSL 606
           I GY  +
Sbjct: 504 IDGYAKV 510



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 4/158 (2%)

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           N  +++ L +   R +   D + +   M   N++  + T+  L+  +        A+ +F
Sbjct: 147 NSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSLRKA---DVALEIF 203

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG-VAPDIAIYNVLLNMLIK 570
            +M   G+ P   ++S +I GL K   I   L   + + + G   P    +N L++ L  
Sbjct: 204 KEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCN 263

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
              +  A  +F  +   GL P   TY+TII G C + S
Sbjct: 264 WGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGS 301


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 144/574 (25%), Positives = 262/574 (45%), Gaps = 90/574 (15%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD---YSF--LIENYVR 124
           LI +L  S   D A  +FDKM                   + GC+   YSF  L+  Y R
Sbjct: 62  LIGLLCDSGCLDDARELFDKMP------------------EKGCEPNEYSFGILVRGYCR 103

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFL 184
            G   + +E+   M  +G   SP+ V                             VY  L
Sbjct: 104 AGFTSKGLELLGEMRRLG--FSPNKV-----------------------------VYNTL 132

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF------DV 238
           ++   ++G  ++A  +  ++ + G  P++VT N  +  LC +G++  AS +F      +V
Sbjct: 133 ISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEV 192

Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           L L  P+PN++T++ ++  FCKE  LE+A  L+  M   + + +   Y+I + GL + G+
Sbjct: 193 LGL--PQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGK 250

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           L E   +L   +D G++ +V  ++ VMD     G +  A      M + G LP+ ++Y+ 
Sbjct: 251 LLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTT 310

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           L+ G C  G++ EA  +  +++     P+  T + L+    K G++ +   L   M ++G
Sbjct: 311 LLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKG 370

Query: 419 LKPDAVVCSLLINGL-----------------------MGDALRFFFQSV-----RMTLI 450
              D V C+++I+GL                       +G+    +   V     R   +
Sbjct: 371 YVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCM 430

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           P+L  ++T++ G C+  R  +  K F+ M   N++PD   + V I     +G +SSA  +
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRV 490

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
              M K+G    + TY+++I GL     I     +   M   GV+PD++IYN +L+ L +
Sbjct: 491 LKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCE 550

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              +  A  +  ++  +G+ P+I +++ +I  +C
Sbjct: 551 GGRVKDAPSVLDEMLQKGISPNISSFSILIKAFC 584



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 211/495 (42%), Gaps = 67/495 (13%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y  L+    ++G ++    + + ++  G  P   T N ++  LC +G + +A  LFD +
Sbjct: 23  LYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKM 82

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G +PN  +F  L+  +C+     K  +L   M  +   P+ ++Y+ LI    K G+ 
Sbjct: 83  PEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKT 142

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL----PNVIS 355
            +  +L+      GL  DVV F++ + A    G V  A + +  M     L    PN+I+
Sbjct: 143 DDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIIT 202

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRR-------------------------------- 383
           Y++++ G C++G L EA  LF ++ +                                  
Sbjct: 203 YNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMV 262

Query: 384 ---LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
              +EP++ +Y+ ++DG CK+G L D   L   M   G+ PD V  + L++G      + 
Sbjct: 263 DMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVS 322

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +A     + +R    PN +  N L+    +  R ++  +L   M       D +T  ++I
Sbjct: 323 EANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVI 382

Query: 496 RGIASQGSLSSAILLFFQMLKRGLT-----------------------PDVITYSAIIHG 532
            G+ + G L  AI +   M   G                         PD+I+YS II G
Sbjct: 383 DGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISG 442

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K   +      F  M    + PD AIY+V ++   KE  + +A ++   +  +G    
Sbjct: 443 LCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKT 502

Query: 593 IITYNTIICGYCSLN 607
           + TYN++I G  S N
Sbjct: 503 LQTYNSLIMGLGSKN 517



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 200/426 (46%), Gaps = 32/426 (7%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+I   N +L+     G++   S L   ++  G  P   TF+ LI   C    L+ A +L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           ++ M E    P+   + IL+ G  +AG   +G ELL      G   + VV+++++ ++  
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL----EP 386
            G    A +  D M   G  P+V++++  I  LC  G+++EA  +F  + I  +    +P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNM-IKRGL----KPDAVVCSLLINGLMGDALRFF 441
           +++TY+ ++ GFCK G L +  +L++ M +   L      +  +  L+  G + +A    
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + V M + PN++ +N +MDG C+     D   L  LM    + PD +T+T L+ G    
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +S A  +  +M++ G +P+  T + +++ L+K   IS    + + M   G   D    
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLE-----------------------PDIITYNT 598
           N++++ L     LD A+++   +   G                         PD+I+Y+T
Sbjct: 379 NIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYST 438

Query: 599 IICGYC 604
           II G C
Sbjct: 439 IISGLC 444



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 133/558 (23%), Positives = 235/558 (42%), Gaps = 101/558 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI ++ + GK D++ ++   M   G  LSPD+V     +S L  S  V +  ++ R 
Sbjct: 129 YNTLISSFCKEGKTDDAEKLVDEMRKDG--LSPDVVTFNARISALCSSGKVLEASRIFRD 186

Query: 173 MRGK------------------GFC----------------VYEFLMN---------GLL 189
           M+                    GFC                V E LMN         GL+
Sbjct: 187 MQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLV 246

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           R G +  A  + ++++  G  PN+ + N ++  LC NG + +A  L  ++   G  P+ V
Sbjct: 247 RIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTV 306

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           T++TL++ +C   K+ +A  +   MM     P+    +IL+  L+K GR+ E  ELL   
Sbjct: 307 TYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM 366

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF-------------------- 349
            ++G  +D V  + V+D     G + +A++  + M   G                     
Sbjct: 367 NEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSR 426

Query: 350 ---LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
              +P++ISYS +I GLC+ GR+ EA   F +++ + L+P    Y   I  FCK GK+  
Sbjct: 427 KKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISS 486

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
            F +  +M K+G                                  L  +N+L+ G    
Sbjct: 487 AFRVLKDMEKKGCNK------------------------------TLQTYNSLIMGLGSK 516

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  +   L   M    + PDV  +  ++  +   G +  A  +  +ML++G++P++ ++
Sbjct: 517 NQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSF 576

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           S +I    K  + S    +F++   N      A+Y++  N L+    +  A +LF    D
Sbjct: 577 SILIKAFCKACDFSAVDEIFEIA-LNVCGHKEALYSLTFNELLVGGEVVKAKELFETALD 635

Query: 587 RGLEPDIITYNTIICGYC 604
           R  +     Y  +I   C
Sbjct: 636 RSFDVGNFLYKDLIDHLC 653



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 166/369 (44%), Gaps = 44/369 (11%)

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P + +Y++L+    K GR+   + L    +  G+  +   F+ ++      G +  A + 
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           +D+M   G  PN  S+ IL++G C+ G   +   L G++      P+ + Y++LI  FCK
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAV-----VCSLLINGLMGDALRFF----FQSVRMTLIP 451
            GK  D   L D M K GL PD V     + +L  +G + +A R F       V     P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGM---------YNI------------------ 484
           N+  +N ++ G C+     +   LF  M +         YNI                  
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 485 --------KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
                   +P+V ++ +++ G+   G L  A +L   M   G+ PD +TY+ ++HG    
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
             +S   ++ + M R+G +P+    N+LL  L KE  +  A +L  ++ ++G   D +T 
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 597 NTIICGYCS 605
           N +I G C+
Sbjct: 379 NIVIDGLCN 387



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 151/380 (39%), Gaps = 61/380 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ L+  Y   GK+ E+  +   M   G   +      L+  L     + +  +L + M 
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGF--------------------- 209
            KG+ +       +++GL   G ++ A  +   +   G                      
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427

Query: 210 --VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
             +P++++ + I+  LC  G++G A   F  ++    +P+   +   I++FCKE K+  A
Sbjct: 428 KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           F++   M +      L  Y+ LI GL    ++ E   L+    +RG+  DV ++++V+ +
Sbjct: 488 FRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSS 547

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ--------------------- 366
               G V  A    D ML  G  PN+ S+SILIK  C+                      
Sbjct: 548 LCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKE 607

Query: 367 -------------GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
                        G +V+A  LF   L R  +     Y  LID  CK  KL D   +   
Sbjct: 608 ALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHK 667

Query: 414 MIKRGLKPDAVVCSLLINGL 433
           +I +G   D      +I+GL
Sbjct: 668 LIDKGYWFDPASFMPVIDGL 687



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 9/264 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRA 172
           YS +I    + G++ E+ + F  M  MG  L PD  +    +        +   +++ + 
Sbjct: 436 YSTIISGLCKAGRVGEAKKKFIEM--MGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKD 493

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  KG       Y  L+ GL  K  I   + +  ++ +RG  P++   N +L  LC  G+
Sbjct: 494 MEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGR 553

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A S+ D +L  G  PN+ +FS LI AFCK        +++ + + +       +YS+
Sbjct: 554 VKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNV-CGHKEALYSL 612

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
             + L   G + +  EL  TALDR   +   ++  ++D       +  A     ++++ G
Sbjct: 613 TFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKG 672

Query: 349 FLPNVISYSILIKGLCQQGRLVEA 372
           +  +  S+  +I GL ++G   EA
Sbjct: 673 YWFDPASFMPVIDGLGKRGNKHEA 696



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 4/169 (2%)

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           +LRF F        P+++++N L+  C +  R      L   M    + P+  T  VLI 
Sbjct: 9   SLRFRFPENP----PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIG 64

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
            +   G L  A  LF +M ++G  P+  ++  ++ G  +    S GL +   M R G +P
Sbjct: 65  LLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSP 124

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           +  +YN L++   KE   D A KL  ++   GL PD++T+N  I   CS
Sbjct: 125 NKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCS 173


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 205/399 (51%), Gaps = 14/399 (3%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  PNIV+ + ++   C  GQ+  A S+F  +L +G  PN +T +TL+  FC   K+++A
Sbjct: 101 GIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEA 160

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
              ++ ++ +    + + Y  LI+GL K G  +   ++L     + +  DVV++S+++D 
Sbjct: 161 LHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDG 220

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
                 V  A + Y  M+     P V++ + LI G C  G+  EA GL  +++++ + P 
Sbjct: 221 LCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPD 280

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGDALRFFFQSV 445
           + T++ L+D  CK GK+++  S    M+K G+ PD V  S L++G  L+ +  +      
Sbjct: 281 VYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNK------ 334

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
                    +++ +++G C++K     + LF  M    I PD +T+  LI G+   G +S
Sbjct: 335 ------AKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRIS 388

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  L  +M   G   D+ITY+++I  L K  ++   + + K ++  G+  D+  YN+L+
Sbjct: 389 YAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILI 448

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           + L K+  L  A  +F  L  +G    + TY  +I G C
Sbjct: 449 DGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLC 487



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 211/431 (48%), Gaps = 28/431 (6%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S LI  Y  +G++  +  IFA +  MG + +   +  L+     ++ V +       +  
Sbjct: 110 SILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLA 169

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            GF      Y  L+NGL + G    A  M RQ+  +    ++V  + I+  LC +  + +
Sbjct: 170 LGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVND 229

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L+  ++     P VVT ++LI  +C   + ++AF L   M+  ++ PD+  ++IL+D
Sbjct: 230 AYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVD 289

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G++KE    +   +  G+  DVV +SS+MD Y  + +V +A   Y          
Sbjct: 290 ALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVY---------- 339

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
                SI+I G C+   + +A  LF ++  RR+ P  +TY+SLIDG CKSG++   + L 
Sbjct: 340 -----SIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELV 394

Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
           D M   G   D +  + LI+ L     +  A+    +     +  +++ +N L+DG C+ 
Sbjct: 395 DEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQ 454

Query: 467 KRATDTVKLF--MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
            R  D   +F  +L+  YN+   V T+T++I G+  +G L+ A  L  +M   G  PD +
Sbjct: 455 GRLKDAQVIFQDLLIKGYNLT--VWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAV 512

Query: 525 TYSAIIHGLFK 535
           T   II  LF+
Sbjct: 513 TCETIIRALFE 523



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 191/422 (45%), Gaps = 66/422 (15%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+++   KIL  L          SLF  L   G KPN+V+ S LIN +C   ++  AF +
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           +  +++M   P+ I  + L+ G     ++KE                             
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKE----------------------------- 159

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
                 A+  +D +L  GF  N +SY  LI GLC+ G    A  +  Q+  + +   ++ 
Sbjct: 160 ------ALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVM 213

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           YS++IDG CK   + D + LY  MI + + P  V  + LI G        +A     + V
Sbjct: 214 YSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMV 273

Query: 446 RMTLIPNLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVIT------------ 490
              + P+++ FN L+D  C   ++K A   + + M  G   + PDV+T            
Sbjct: 274 LKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEG---VMPDVVTYSSLMDGYCLVN 330

Query: 491 --------HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
                   ++++I G      +  A+ LF++M  R + PD +TY+++I GL K   IS  
Sbjct: 331 EVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYA 390

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             +   M  +G   DI  YN L++ L K  ++D A+ L  ++ D+G++ D+ TYN +I G
Sbjct: 391 WELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDG 450

Query: 603 YC 604
            C
Sbjct: 451 LC 452



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 168/345 (48%), Gaps = 28/345 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y  LI    +IG+   ++++   +   G  +S D+V    ++  L     V   Y+L   
Sbjct: 179 YGTLINGLCKIGETRAALQMLRQIE--GKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSE 236

Query: 173 MRGKGFCVYEFLMNGLLRK----GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  K        +N L+      G  + AF + R+++ +   P++ T N ++  LC  G+
Sbjct: 237 MITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGK 296

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTL--------------------INAFCKEAKLEKAF 268
           I  A S   V++  G  P+VVT+S+L                    IN FCK   ++KA 
Sbjct: 297 IKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKAL 356

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
            L+  M    + PD + Y+ LIDGL K+GR+    EL+    D G   D++ ++S++DA 
Sbjct: 357 SLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDAL 416

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
                V +A+    ++ + G   ++ +Y+ILI GLC+QGRL +A  +F  +LI+    ++
Sbjct: 417 CKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTV 476

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
            TY+ +I+G C  G L +  +L   M   G  PDAV C  +I  L
Sbjct: 477 WTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRAL 521



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 115/510 (22%), Positives = 225/510 (44%), Gaps = 72/510 (14%)

Query: 38  ILANLIKTNN-PTPAIQFFKWTHNCVSSPNIAQL---IHVLLQSDMRDVASHVFDKMVIQ 93
           IL++L+K  + PT    F++   N +  PNI  L   I+          A  +F K +++
Sbjct: 77  ILSSLVKLKHYPTVISLFYQLEFNGIK-PNIVSLSILINCYCHLGQMRFAFSIFAK-ILK 134

Query: 94  FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
            G   N   L            + L++ +    K+ E++    ++  +G + +      L
Sbjct: 135 MGYHPNTITL------------TTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTL 182

Query: 154 MSCLVDSNSVGQYYKLCRAMRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           ++ L          ++ R + GK       +Y  +++GL +  ++ +A+ ++ ++I +  
Sbjct: 183 INGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRI 242

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P +VT N ++   CI GQ   A  L   ++L    P+V TF+ L++A CKE K+++A  
Sbjct: 243 SPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKS 302

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL---------LTALDRGLKL---- 316
              +MM+  ++PD++ YS L+DG      + +   +          +  +D+ L L    
Sbjct: 303 GIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEM 362

Query: 317 -------DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
                  D V ++S++D     G +  A +  D M + G   ++I+Y+ LI  LC+   +
Sbjct: 363 RCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHV 422

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  L  ++  + ++  + TY+ LIDG CK G+L+D   ++ +++ +G        +++
Sbjct: 423 DKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIM 482

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
           INGL  + L    +++   +  N         GC                      PD +
Sbjct: 483 INGLCLEGLLNEAETLLSKMEDN---------GCV---------------------PDAV 512

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           T   +IR +        A  L  +M+ RGL
Sbjct: 513 TCETIIRALFENDKNERAEKLLREMIARGL 542



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 140/280 (50%), Gaps = 5/280 (1%)

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
           V   V ++ RML     P+VI +  ++  L +         LF Q+    ++P++++ S 
Sbjct: 52  VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 111

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
           LI+ +C  G++R  FS++  ++K G  P+ +  + L+ G      + +AL F    + + 
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
              N   + TL++G C++      +++   +    +  DV+ ++ +I G+     ++ A 
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L+ +M+ + ++P V+T +++I+G            + + M    + PD+  +N+L++ L
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291

Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            KE  +  A      +   G+ PD++TY++++ GYC +N 
Sbjct: 292 CKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNE 331



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 81/170 (47%), Gaps = 4/170 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+   + G+I  + E+   M D G          L+  L  ++ V +   L + ++
Sbjct: 374 YNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIK 433

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +G       Y  L++GL ++G +++A  + + ++ +G+   + T   ++  LC+ G + 
Sbjct: 434 DQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLN 493

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
            A +L   +   G  P+ VT  T+I A  +  K E+A +L   M+   L+
Sbjct: 494 EAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 158/620 (25%), Positives = 266/620 (42%), Gaps = 118/620 (19%)

Query: 4   KFKNLLTVWRSINKCYCSESK-----THISDLQFNQANAILANLIKTNNPTPAIQ----- 53
           K  N  T + S N  Y + +        IS L   Q  + L  ++K  NP+  +Q     
Sbjct: 24  KLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNS 83

Query: 54  ---------FFKWTHNCVSS-PNIAQ---LIHVLLQSDMRDVASHVFDKMVIQFGKTYNF 100
                    +FKWT     +  N+ Q   L+H+L  +                  K YN 
Sbjct: 84  EAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANA------------------KNYNK 125

Query: 101 FRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
            R   DS       YS              +  IF  +S +G +           C   +
Sbjct: 126 IRALLDSFAK-NAHYS--------------NSTIFHSLSVLGSW----------GC---A 157

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           NS+                + + L+   ++ G ++ A     +    GF  + ++CN +L
Sbjct: 158 NSI----------------IVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPML 201

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             L   G+IG   S++  ++      NVVTF  +IN  CK  K +KA  +   M      
Sbjct: 202 VSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFS 261

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           P +I Y+ +IDG  KAG++ + + LL   + + +  + + F+ ++D +    +V  A + 
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
           ++ M   G  PNV++Y+ LI GLC  G+L EA GL  ++    L+P+++TY++LI+GFCK
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLM 460
              L++   + D++ KRG                              L PN+  FNTL+
Sbjct: 382 KKMLKEAREMLDDIGKRG------------------------------LAPNVITFNTLI 411

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           D   +  R  D   L  +M    + P+V T+  LI G   +G++  A  L  +M   GL 
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFK---LMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            D++TY+ ++  L K       + +     LME+ G   +I  YNVL+     +  L+ A
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEA 531

Query: 578 LKLFGQLTDRGLEPDIITYN 597
            +L  ++ ++GL P+  TY+
Sbjct: 532 NRLLNEMLEKGLIPNRTTYD 551



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 210/424 (49%), Gaps = 11/424 (2%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK--PNVV 249
           G I N     R +       N      +L     N    N S++F  L ++G     N +
Sbjct: 102 GAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSN-STIFHSLSVLGSWGCANSI 160

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
               L+ A+ K  +++ A + ++   +       +  + ++  L K GR+     +    
Sbjct: 161 IVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEM 220

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           + R + ++VV F  V++    +G   +A    + M   GF P+VI+Y+ +I G C+ G++
Sbjct: 221 IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKM 280

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  L  +++ +R+ P+ +T++ LIDGFC+   +     +++ M ++GL+P+ V  + L
Sbjct: 281 FKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340

Query: 430 INGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           INGL     + +AL    +   M L PN+  +N L++G C+ K   +  ++   +G   +
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            P+VIT   LI      G +  A LL   ML  G+ P+V TY+ +I G  +  N+     
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT---DRGLEPDIITYNTIIC 601
           + K ME NG+  D+  YN+L++ L K+     A++L  ++T    +G   +I+TYN +I 
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIK 520

Query: 602 GYCS 605
           G+C+
Sbjct: 521 GFCN 524



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 134/262 (51%), Gaps = 11/262 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ LI+ + R   +  + ++F  M   G  L P++V    L++ L  +  + +   L   
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQG--LQPNVVTYNSLINGLCSNGKLDEALGLQDK 359

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M G G       Y  L+NG  +K +++ A  M   + +RG  PN++T N ++      G+
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           + +A  L  ++L  G  PNV T++ LI  FC+E  +++A +L   M    L  DL+ Y+I
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479

Query: 289 LIDGLFKAGRLKEGNELL--LTALDR-GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           L+D L K G  ++   LL  +T +++ G + ++V ++ ++  +   G +  A +  + ML
Sbjct: 480 LVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 539

Query: 346 NGGFLPNVISYSILIKGLCQQG 367
             G +PN  +Y IL   + ++G
Sbjct: 540 EKGLIPNRTTYDILRDEMMEKG 561


>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
 gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
          Length = 453

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 201/391 (51%), Gaps = 5/391 (1%)

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           K++  L   G+   A S+F+ L+  G KP ++T++TL+ A  ++   +   +L + + E 
Sbjct: 18  KLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEEN 77

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + PD I+++ +I+   ++G +KE  +L     + G K     F++++  Y   G    A
Sbjct: 78  GMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEA 137

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++  + + +GG  PN  +Y+IL++  C +  + EA  +  +++   ++P  +TY++L   
Sbjct: 138 LKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARA 197

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
           + + G+      +   M+ R + P+   CS+++NG      M DA RF F+   + ++PN
Sbjct: 198 YAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPN 257

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           LF+FN+L+ G           ++  LM    ++PDV+T + ++   +S G +     +F 
Sbjct: 258 LFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFN 317

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            M+K  + PD+  +S +  G  +         +   M + GV P++ I   +++      
Sbjct: 318 DMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAG 377

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
            ++ A+K++ ++ + G+ P++ TY T+I GY
Sbjct: 378 KMEHAMKVYEKMCEIGVSPNLKTYETLIWGY 408



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 191/414 (46%), Gaps = 9/414 (2%)

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           +LM+ L+      + + +  ++  +G       Y  L+  L R+ + ++   +  +V + 
Sbjct: 18  KLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEEN 77

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P+ +  N I+     +G +  A  LF  +   G KP   TF+TLI  +    K E+A
Sbjct: 78  GMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEA 137

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +L   + +  + P+   Y+IL+        ++E   ++   +  G++ D V ++++  A
Sbjct: 138 LKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARA 197

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y   G+  RA +    MLN    PN  + SI++ G C++G +V+A     ++    + P+
Sbjct: 198 YAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPN 257

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
           L  ++SLI GF  +        +   M + G++PD V  S ++N     G M      F 
Sbjct: 258 LFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFN 317

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
             V+  + P++  F+ L  G  R         +   M  Y + P+V+  T +I G  S G
Sbjct: 318 DMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAG 377

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
            +  A+ ++ +M + G++P++ TY  +I G  + K       + ++ME  GV P
Sbjct: 378 KMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFP 431



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 178/375 (47%), Gaps = 41/375 (10%)

Query: 66  NIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNF---FRLFRDSLGDFGCD-----YSF 117
           +I +LI  + ++ M+   S +F+ ++  F ++ N     +LFR  + + GC      ++ 
Sbjct: 66  SILRLISKVEENGMKP-DSILFNSIINAFSESGNMKEAMKLFR-KMKESGCKPTTSTFNT 123

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI+ Y   GK +E++++  ++ D G+   P+  QR                         
Sbjct: 124 LIKGYGNAGKTEEALKLLEFLQDGGV--KPN--QR------------------------- 154

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
              Y  L+     K  +E A++M  +++  G  P+ VT N + +     G+   A  +  
Sbjct: 155 --TYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMIL 212

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +L     PN  T S ++N +CKE  +  A +    M E+ ++P+L +++ LI G     
Sbjct: 213 EMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTM 272

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
             +  +E+L    + G++ DVV FS++M+A+   G + +  + ++ M+     P++ ++S
Sbjct: 273 DTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFS 332

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           IL KG  + G   +A  +   +    + P+++  +++I G+C +GK+     +Y+ M + 
Sbjct: 333 ILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEI 392

Query: 418 GLKPDAVVCSLLING 432
           G+ P+      LI G
Sbjct: 393 GVSPNLKTYETLIWG 407



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 136/289 (47%), Gaps = 5/289 (1%)

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           + +M+  +G G    A   ++ +++ G  P +I+Y+ L+  L +Q        L  +V  
Sbjct: 17  TKLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEE 76

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
             ++P  + ++S+I+ F +SG +++   L+  M + G KP     + LI G        +
Sbjct: 77  NGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEE 136

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           AL+         + PN   +N L+   C  +   +   +   M    ++PD +T+  L R
Sbjct: 137 ALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLAR 196

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
             A +G    A  +  +ML R +TP+  T S I++G  K  N+         M+  GV P
Sbjct: 197 AYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLP 256

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           ++ ++N L+   +   + +   ++   + + G+ PD++T++TI+  + S
Sbjct: 257 NLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSS 305



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 131/257 (50%), Gaps = 7/257 (2%)

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           V S + L+  L  +G+  EA  +F  ++    +P+L+TY++L+    +    +    L  
Sbjct: 13  VRSRTKLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLIS 72

Query: 413 NMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            + + G+KPD+++ + +IN     G M +A++ F +       P    FNTL+ G     
Sbjct: 73  KVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAG 132

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           +  + +KL   +    +KP+  T+ +L+R   ++ ++  A  + ++M+  G+ PD +TY+
Sbjct: 133 KTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYN 192

Query: 528 AIIHGLF-KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
            +      KG+ I     + +++ R  V P+    ++++N   KE N+  A +   ++ +
Sbjct: 193 TLARAYAEKGETIRAEEMILEMLNRR-VTPNERTCSIIVNGYCKEGNMVDASRFVFRMKE 251

Query: 587 RGLEPDIITYNTIICGY 603
            G+ P++  +N++I G+
Sbjct: 252 LGVLPNLFVFNSLIKGF 268



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 4/221 (1%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           S ++  Y + G + ++      M ++G+  +  +   L+   +D+       ++   M  
Sbjct: 227 SIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEE 286

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            G       +  +MN     G ++    +   +++    P+I   + + K     G+   
Sbjct: 287 NGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEK 346

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A S+   +   G  PNVV  +T+I+ +C   K+E A ++Y  M E+ + P+L  Y  LI 
Sbjct: 347 AESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIW 406

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
           G  +A +  +  ELL    ++G+         + DA+  IG
Sbjct: 407 GYGEAKQPLKAEELLQVMEEKGVFPKKGTMQLIADAWRAIG 447



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 12/177 (6%)

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQYYK-------LCRAMRGKGFCVYEFL 184
           E+   M + G+   PD+V    S ++++ +S G+  K       + +A        +  L
Sbjct: 279 EVLTLMEENGV--RPDVVT--FSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSIL 334

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
             G +R G  E A  +   + + G  PN+V C  ++   C  G++ +A  +++ +  +G 
Sbjct: 335 AKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGV 394

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            PN+ T+ TLI  + +  +  KA +L  +M E  + P      ++ D     G L E
Sbjct: 395 SPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKKGTMQLIADAWRAIGLLSE 451


>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 376

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 189/354 (53%), Gaps = 6/354 (1%)

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C+   ++ A ++Y  M E  + PD ++Y+ ++ G  + GR+K+  +L    + R    +V
Sbjct: 1   CESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLW-ELMGRKGSQNV 59

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
           V F+ +M      G+V +A+  ++ M   GF+ + I+Y I+I G C+ G + ++  +   
Sbjct: 60  VSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEI 119

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG--- 435
              +        YS++I+G CK  KL    S+ + MIK G KP+A V + LING +G   
Sbjct: 120 AEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASK 179

Query: 436 --DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             DA+R F +   M   P +  ++TL++G C+ +R ++   L   M     KP VIT+++
Sbjct: 180 FDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSL 239

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L++G+     +  A+ L+ Q+L +G  PDV  ++ +IHGL         L ++  M    
Sbjct: 240 LMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWN 299

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            AP++  +N L+    K+ ++  AL ++ ++   GL+PDII+YN  + G CS N
Sbjct: 300 CAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCN 353



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 171/325 (52%), Gaps = 9/325 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ ++  ++R+G+I +  +++  M   G   S ++V    +M  L D+  V +   +   
Sbjct: 28  YNAMLIGFLRVGRIKDCFDLWELMGRKG---SQNVVSFNIMMRGLFDNGEVDKAISIWEL 84

Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  GF      Y  +++G  + G I  + H+      +G V +    + ++  LC   +
Sbjct: 85  MKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAK 144

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A S+ + ++  G KPN   ++TLIN F   +K + A +++  M  MD  P ++ Y  
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHT 204

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+GL K  R  E  +L+   L++G K  V+ +S +M        V  A+Q ++++L+ G
Sbjct: 205 LINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKG 264

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
           F P+V  ++ILI GLC  G+   A  L+  +      P+L+T+++L++GF K G +R+  
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL 433
            ++  +++ GL+PD +  ++ + GL
Sbjct: 325 VIWARILRSGLQPDIISYNITLKGL 349



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 128/281 (45%), Gaps = 41/281 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    +  K+D++V +   M   G   +  +   L++  V ++      ++ R M 
Sbjct: 132 YSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREM- 190

Query: 175 GKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           G   C      Y  L+NGL +      A+ + ++++++G+ P ++T + ++K LC   ++
Sbjct: 191 GSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKV 250

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  L++ +L  G KP+V   + LI+  C   K + A  LY  M   +  P+L+ ++ L
Sbjct: 251 EMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTL 310

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++G +K G                                   D+  A+  + R+L  G 
Sbjct: 311 MEGFYKDG-----------------------------------DIRNALVIWARILRSGL 335

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            P++ISY+I +KGLC   R+  A       L +++ P+++T
Sbjct: 336 QPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPTIIT 376


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 227/448 (50%), Gaps = 11/448 (2%)

Query: 131 SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR 190
           S+ +++ M  + + +S   +  L+S L  + +   +  + R         +  ++  L  
Sbjct: 67  SLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCS 126

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF-DVLLLVGPKPNVV 249
            G    A  + RQ+ +    PN VT N ++   C  G++  A  +  ++    G  PN  
Sbjct: 127 AGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQY 182

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMM-EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
           T+ T+I+ +CK  ++++A ++++ M+ + ++ P+ ++Y+ LI G    G+L         
Sbjct: 183 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDR 242

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
            ++RG+ + V  ++ ++ A    G    A +  + M   G  P+V +Y+ILI G C++G 
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 302

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
           + +A  +F  +  R +  +++TY++LI    K G++++   L+D  ++RG++PD V+ + 
Sbjct: 303 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 362

Query: 429 LIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LIN     G +  A     +  +  + P+   +NTLM G C L R  +  KL   M    
Sbjct: 363 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 422

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           I+PD++T+  LI G + +G +  A+ +  +M+ +G  P ++TY+A+I GL K        
Sbjct: 423 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 482

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKE 571
           +M K M  NG+ PD + Y  L+  L  E
Sbjct: 483 NMVKEMVENGITPDDSTYISLIEGLTTE 510



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 201/406 (49%), Gaps = 11/406 (2%)

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T N +L+ LC  G+   A  L   +    P+PN VT++T+I  FC   +++ A  +   
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 170

Query: 274 MMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYVGI 331
           M E   + P+   Y  +I G  K GR+ E  ++    L +G +K + V++++++  Y   
Sbjct: 171 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G +  A+   DRM+  G    V +Y++L+  L   GR  EA  L  ++  + L P + TY
Sbjct: 231 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 290

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVR 446
           + LI+G CK G ++    +++NM +RG++   V  + LI      G + +  + F ++VR
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             + P+L ++N L++            ++   M    I PD +T+  L+RG+   G +  
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L  +M +RG+ PD++TY+ +I G     ++   L +   M   G  P +  YN L+ 
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
            L K    D A  +  ++ + G+ PD  TY ++I G  + +   ID
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAID 516



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 177/345 (51%), Gaps = 11/345 (3%)

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           AF L+  M  + L      ++I++  L  AG+     ELL     +  + + V +++V+ 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL----RQMPRPNAVTYNTVIA 153

Query: 327 AYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR-RL 384
            +   G V  A+     M   GG  PN  +Y  +I G C+ GR+ EA  +F ++L +  +
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALR 439
           +P  + Y++LI G+C  GKL       D M++RG+       +LL++ L  D     A  
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              +     L P++F +N L++G C+       +++F  M    ++  V+T+T LI  ++
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G +     LF + ++RG+ PD++ Y+A+I+      NI     +   ME+  +APD  
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 393

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            YN L+  L     +D A KL  ++T+RG++PD++TYNT+I GY 
Sbjct: 394 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYS 438



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 196/407 (48%), Gaps = 39/407 (9%)

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           ++++ +K L  L +   +  A S    LLL      V   +T +  + +   L       
Sbjct: 26  SVLSADKALSPLAVLPHLDGAPSSLPNLLLTA-SAAVRPHATSLRLYSRMKSLSLPISTA 84

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           +L   +  +P    +++  D +F   RL+             L L    F+ ++      
Sbjct: 85  SLHPLLSALPSAPAFALFAD-MF---RLR-------------LPLCTTTFNIMLRHLCSA 127

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR-LEPSLLT 390
           G   RA++   +M      PN ++Y+ +I G C +GR+  A  +  ++  R  + P+  T
Sbjct: 128 GKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 183

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRG-LKPDAVVCSLLINGL-----MGDAL----RF 440
           Y ++I G+CK G++ +   ++D M+ +G +KP+AV+ + LI G      +  AL    R 
Sbjct: 184 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 243

Query: 441 FFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
             + V MT+   NL +    MDG     R T+  +L   MG   + PDV T+ +LI G  
Sbjct: 244 VERGVAMTVATYNLLVHALFMDG-----RGTEAYELVEEMGGKGLAPDVFTYNILINGHC 298

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G++  A+ +F  M +RG+   V+TY+A+I+ L K   +     +F    R G+ PD+ 
Sbjct: 299 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 358

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           +YN L+N      N+D A ++ G++  + + PD +TYNT++ G C L
Sbjct: 359 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 405



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 183/387 (47%), Gaps = 60/387 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I  + ++G++DE+V++F  M   G  + P+ V                        
Sbjct: 184 YGTVISGWCKVGRVDEAVKVFDEMLTKG-EVKPEAV------------------------ 218

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                +Y  L+ G   +G ++ A     ++++RG    + T N ++  L ++G+   A  
Sbjct: 219 -----MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G  P+V T++ LIN  CKE  ++KA +++  M    +   ++ Y+ LI  L 
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G+++E ++L   A+ RG++ D+V+++++++++   G++ RA +    M      P+ +
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 393

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ L++GLC  GR+ EA  L  ++  R ++P L+TY++LI G+   G ++D   + + M
Sbjct: 394 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 453

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + +G                                P L  +N L+ G C+  +  D   
Sbjct: 454 MNKGFN------------------------------PTLLTYNALIQGLCKNGQGDDAEN 483

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQ 501
           +   M    I PD  T+  LI G+ ++
Sbjct: 484 MVKEMVENGITPDDSTYISLIEGLTTE 510


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 218/423 (51%), Gaps = 20/423 (4%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           +P +  CN IL  L     +     LFD +L  G  P+VVT++TLINA   +  + KA++
Sbjct: 135 LPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWE 194

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +++ M+   + P+++ Y+ +I  L +   + +   L L   + G++ ++  ++++M ++ 
Sbjct: 195 VWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHF 254

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
              ++  A+  Y  +L  G +PN + ++ LI GLC+  R+ EA  +F  +    + P++ 
Sbjct: 255 KRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVP 314

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
            Y+SLI G  +SG  ++  + +  +I++ L+PD   CS+++ GL     M  A RF    
Sbjct: 315 VYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVM 374

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
            +  +  N   +N L+D  C+     + +     M    ++P+V+T++ LI G +  G +
Sbjct: 375 QQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEM 434

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A+ ++ +M+ +G+ P+V+TY+A+IHG  K  ++     + K ME  G+  +    +VL
Sbjct: 435 EIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVL 494

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLE---PDI---ITYNTIICG---------YCSLNSC 609
           ++ L +E  +  A++   + + +      P I   +TY T+I G          C   SC
Sbjct: 495 VDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSC 554

Query: 610 LID 612
           + D
Sbjct: 555 MRD 557



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 218/478 (45%), Gaps = 53/478 (11%)

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFL 184
           DE++ +F  + ++    +      ++  LV ++ + + ++L   M G+G       Y  L
Sbjct: 123 DEALSVFGRLRELPALPA---CNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTL 179

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           +N    +G +  A+ +  Q++ R   PN+VT   ++  LC    IG+A  LF  +   G 
Sbjct: 180 INACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGM 239

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +PN+ T++ L+++  K   ++ A   Y  +++  LVP+ +I++ LIDGL KA R+ E   
Sbjct: 240 RPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKN 299

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           + L      +   V V++S++      G    A+  +  ++     P+  + SI+++GLC
Sbjct: 300 IFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLC 359

Query: 365 QQGRLV--------------------------EAC--GLFGQVLIR-------RLEPSLL 389
             G++                           E C  G   + L+         +EP+++
Sbjct: 360 DGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVV 419

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GDALRFFFQSVRM 447
           TYSSLIDG  K+G++    ++Y  M+ +G++P+ V  + LI+G    GD    F+    M
Sbjct: 420 TYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEM 479

Query: 448 T---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG---MYNIKPDV---ITHTVLIRGI 498
               +  N    + L+DG CR  R  D V+  M           P +   +T+  LI G+
Sbjct: 480 EEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGL 539

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
              G  + A   F  M   G+ PD  TY+ +I GL     +   + ++  M + GV P
Sbjct: 540 YIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKP 597



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/450 (21%), Positives = 195/450 (43%), Gaps = 71/450 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI      G + ++ E++  M  +   + P++V    ++  L + + +G    L   
Sbjct: 176 YNTLINACRHQGDVAKAWEVWDQM--VARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLE 233

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G       Y  LM+   ++  I++A   +  +++ G VPN V    ++  LC   +
Sbjct: 234 MKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANR 293

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A ++F  +      P V  +++LI+   +    ++A   +  ++  +L PD    SI
Sbjct: 294 ITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSI 353

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           ++ GL   G+++     L      G+ L+   ++ ++D Y   G++  A+ T  RM   G
Sbjct: 354 VVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVG 413

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL-------------- 394
             PNV++YS LI G  + G +  A  ++ +++ + +EP+++TY++L              
Sbjct: 414 VEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAF 473

Query: 395 ---------------------IDGFCKSGKLRDG--FSLYDNMIKRGLKPDAVVCSLLIN 431
                                +DG C+  +++D   F +  +  K+  K  ++  S+   
Sbjct: 474 WLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV--- 530

Query: 432 GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
                          MTLI  L+I     + C            F  M    + PD  T+
Sbjct: 531 -------------TYMTLIYGLYIDGQYNEAC----------HFFSCMRDSGMVPDRFTY 567

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           T++IRG+   G + +A++L+  M+K G+ P
Sbjct: 568 TLVIRGLCMLGYVLNAMMLYADMVKVGVKP 597



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 132/286 (46%), Gaps = 16/286 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD--LVQRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI    R G   E++  F  +  +   L PD      ++  L D   +    +    
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEI--IRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEV 373

Query: 173 MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M+  G  +    Y  L++   + G ++ A     ++ + G  PN+VT + ++     NG+
Sbjct: 374 MQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGE 433

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A +++  ++  G +PNVVT++ LI+   K   ++ AF L   M E  +  + I  S+
Sbjct: 434 MEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSV 493

Query: 289 LIDGLFKAGRLKEGNELLL-------TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           L+DGL +  R+++    ++       +  +  +   V   + +   Y+  G    A   +
Sbjct: 494 LVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYID-GQYNEACHFF 552

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
             M + G +P+  +Y+++I+GLC  G ++ A  L+  ++   ++P+
Sbjct: 553 SCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 81/162 (50%)

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           R+  +P L   N ++DG  +        +LF  M    + P V+T+  LI     QG ++
Sbjct: 131 RLRELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVA 190

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  ++ QM+ R + P+V+TY+ +I+ L +   I     +F  M+  G+ P++  YN L+
Sbjct: 191 KAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALM 250

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +   K  N+  AL  +  L   GL P+ + + T+I G C  N
Sbjct: 251 SSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKAN 292


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 236/487 (48%), Gaps = 53/487 (10%)

Query: 119 IENYVRIGK--IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD------SNSVGQYYKLC 170
           I++  R+G    ++++++F  +   GI      ++ L   L D      + +V ++ ++ 
Sbjct: 23  IQDRARVGSGGAEDALDVFDELLRRGIGAP---IRSLNGALADVARDNPAAAVSRFNRMA 79

Query: 171 RA---MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
           RA   M       Y  L+      G ++  F     V+++GF    +  N +LK LC + 
Sbjct: 80  RAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADK 139

Query: 228 QIGNASSLFDVLLL----VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME--MDLVP 281
           +  +A    D++L     +   PNV + + ++   C E + ++A +L ++M +     +P
Sbjct: 140 RTDDA---MDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLP 196

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +++ YS +IDGL K G   +        LDR +  +VV++SS++ A      + +A++ +
Sbjct: 197 NVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVH 256

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           DRM+  G  PN  +Y+ L+ G C  G+L EA     ++    +EP+++TYSS +D  CK+
Sbjct: 257 DRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKN 316

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
           G+  +   ++D+M+KRGLK                              P++  +++L+ 
Sbjct: 317 GRCTEARKIFDSMVKRGLK------------------------------PDITTYSSLLH 346

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G        +   LF LM   +++PD      LI   A QG +  A+L+F +M ++GL P
Sbjct: 347 GYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKP 406

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           + +TYS +I+G  K   +   L +F+ M  NGV+P+   YN++L  L +      A + +
Sbjct: 407 NCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFY 466

Query: 582 GQLTDRG 588
            Q+   G
Sbjct: 467 VQIIKSG 473



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 203/402 (50%), Gaps = 30/402 (7%)

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD---LVPD 282
           +G   +A  +FD LL  G    + + +  +    ++     A   +N M       + P 
Sbjct: 31  SGGAEDALDVFDELLRRGIGAPIRSLNGALADVARD-NPAAAVSRFNRMARAGASMVTPT 89

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           +  Y ILI     AGRL  G   L   + +G +++ ++F+ ++    G+    R     D
Sbjct: 90  VHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLK---GLCADKRTDDAMD 146

Query: 343 RMLNG----GFLPNVISYSILIKGLCQQGRLVEACGLF-------GQVLIRRLEPSLLTY 391
            +L G      +PNV S++I++KGLC + R  EA  L        G  L     P++++Y
Sbjct: 147 IVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCL-----PNVVSY 201

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVR 446
           S++IDG  K G     ++ Y  M+ R + P+ V+ S +I  L     M  A+    + V+
Sbjct: 202 STVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVK 261

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             + PN F + +L+ G C   + T+ +K    M    ++P+V+T++  +  +   G  + 
Sbjct: 262 NGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTE 321

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH-MFKLMERNGVAPDIAIYNVLL 565
           A  +F  M+KRGL PD+ TYS+++HG +  +   V +H +F LM ++ + PD  ++N L+
Sbjct: 322 ARKIFDSMVKRGLKPDITTYSSLLHG-YAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLI 380

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
               K+  +D A+ +F ++  +GL+P+ +TY+T+I GYC + 
Sbjct: 381 YASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKIT 422



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 208/424 (49%), Gaps = 16/424 (3%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK---PNV 248
           G  E+A  +  ++++RG    I + N  L  +  +     A S F+ +   G     P V
Sbjct: 32  GGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAA-AVSRFNRMARAGASMVTPTV 90

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
            T+  LI   C   +L+  F     +++     + II++ L+ GL    R  +  +++L 
Sbjct: 91  HTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLR 150

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD--RML---NGGFLPNVISYSILIKGL 363
            +   L     VFS  +    G+    R+ +  +   M+    GG LPNV+SYS +I GL
Sbjct: 151 GMTE-LSCVPNVFSHTI-ILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGL 208

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
            + G   +A   + ++L RR+ P+++ YSS+I   CK   +     ++D M+K G+ P+ 
Sbjct: 209 LKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNC 268

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
              + L++G      + +A++F  +     + PN+  +++ MD  C+  R T+  K+F  
Sbjct: 269 FTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDS 328

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    +KPD+ T++ L+ G A +G+L     LF  M++  + PD   ++ +I+   K   
Sbjct: 329 MVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGK 388

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   + +F  M + G+ P+   Y+ L+N   K   ++ AL LF ++   G+ P+ ITYN 
Sbjct: 389 VDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNI 448

Query: 599 IICG 602
           ++ G
Sbjct: 449 MLQG 452



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 150/289 (51%), Gaps = 6/289 (2%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G +PN+V+ + ++  L   G    A + +  +L     PNVV +S++I A CK   ++KA
Sbjct: 193 GCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKA 252

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            ++++ M++  + P+   Y+ L+ G   +G+L E  + L      G++ +VV +SS MD 
Sbjct: 253 MEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDY 312

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
               G    A + +D M+  G  P++ +YS L+ G   +G LVE  GLF  ++   ++P 
Sbjct: 313 LCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPD 372

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
              +++LI    K GK+ +   ++  M ++GLKP+ V  S LING      M +AL  F 
Sbjct: 373 HYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQ 432

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
           + V   + PN   +N ++ G  R  R T T K F +  + + K D+I  
Sbjct: 433 EMVSNGVSPNFITYNIMLQGLFRTGR-TATAKEFYVQIIKSGKKDLIEQ 480



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 153/312 (49%), Gaps = 6/312 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           ++ +++      +  E++E+   M+D G    P++V    ++  L+      + Y   R 
Sbjct: 164 HTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYRE 223

Query: 173 MRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  +       +Y  ++  L +   ++ A  +H ++++ G  PN  T   ++   C +GQ
Sbjct: 224 MLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQ 283

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A    + +   G +PNVVT+S+ ++  CK  +  +A ++++ M++  L PD+  YS 
Sbjct: 284 LTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSS 343

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L+ G    G L E + L    +   ++ D  VF++++ A    G V  A+  + +M   G
Sbjct: 344 LLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQG 403

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN ++YS LI G C+  R+  A  LF +++   + P+ +TY+ ++ G  ++G+     
Sbjct: 404 LKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAK 463

Query: 409 SLYDNMIKRGLK 420
             Y  +IK G K
Sbjct: 464 EFYVQIIKSGKK 475



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 140/293 (47%), Gaps = 10/293 (3%)

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ--GRLVEACGLFGQVLIRRL 384
           A VG G    A+  +D +L  G    + S +  +  + +      V       +     +
Sbjct: 27  ARVGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMV 86

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALR 439
            P++ TY  LI   C +G+L  GF+   +++K+G + + ++ + L+ GL  D     A+ 
Sbjct: 87  TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMD 146

Query: 440 FFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG--MYNIKPDVITHTVLIR 496
              + +  ++ +PN+F    ++ G C   R+ + ++L  +M        P+V++++ +I 
Sbjct: 147 IVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVID 206

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+   G    A   + +ML R + P+V+ YS+II  L KG+ +   + +   M +NGV P
Sbjct: 207 GLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTP 266

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
           +   Y  L++       L  A+K   ++   G+EP+++TY++ +   C    C
Sbjct: 267 NCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRC 319


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 210/426 (49%), Gaps = 19/426 (4%)

Query: 188 LLRKGVIENAFHMHRQVIQRGFVPN----IVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+R+G +++A  +   +   G  P     +  C  ++K+LC +G+  +A  +     L  
Sbjct: 77  LVRRGELDDALRLVDSLA--GLNPPSPAAVGPCAALIKKLCASGRTADARRV-----LAA 129

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+V+ ++ ++  +C   +L+ A +L   + +M + PD   Y+ LI GL   GR     
Sbjct: 130 SGPDVMVYNAMVAGYCGAGQLDAARRL---VADMPVEPDAYTYNTLIRGLCGRGRTSNAL 186

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +L     RG   DVV ++ +++A        +A++  D M + G  P++++Y++++ G+
Sbjct: 187 AVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGI 246

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           CQ+GR+ +A      +     EP+ ++Y+ ++ G   + +  D   L + M  +G  P+ 
Sbjct: 247 CQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNV 306

Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  ++LI+     GL+  A+    Q  +    PN   +N L+   C+ K+    ++   L
Sbjct: 307 VTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVEL 366

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      PD++++  L+  +   G +  AI L  Q+  +G +P +I+Y+ +I GL K   
Sbjct: 367 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGK 426

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
               L +   M   G+ PDI  Y+ + + L +E  ++ A++ F ++ D G+ P    YN 
Sbjct: 427 TKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNA 486

Query: 599 IICGYC 604
           I+ G C
Sbjct: 487 ILLGLC 492



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 230/474 (48%), Gaps = 11/474 (2%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR--AMRGKGFCV 180
           VR G++D+++ +   ++ +    SP  V    + +    + G+     R  A  G    V
Sbjct: 78  VRRGELDDALRLVDSLAGLNPP-SPAAVGPCAALIKKLCASGRTADARRVLAASGPDVMV 136

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++ G    G ++ A    R V      P+  T N +++ LC  G+  NA ++ + + 
Sbjct: 137 YNAMVAGYCGAGQLDAA---RRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMF 193

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  P+VVT++ L+ A CK +  ++A +L + M +    PD++ Y+++++G+ + GR++
Sbjct: 194 RRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVE 253

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +  E L      G + + V ++ V+           A +  + M + G  PNV+++++LI
Sbjct: 254 DAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLI 313

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
             LC++G +  A  +  Q+      P+ L+Y+ L+  FCK  K+       + M+ RG  
Sbjct: 314 SFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCY 373

Query: 421 PDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           PD V     + +L  NG +  A+    Q       P L  +NT++DG  +  +  + ++L
Sbjct: 374 PDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALEL 433

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M    ++PD+IT++ +  G+  +  +  A+  F ++   G+ P    Y+AI+ GL K
Sbjct: 434 LDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCK 493

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
            +     + +F  M  +G  P+ + Y +L+  L  E  +  A +LF QL  RG+
Sbjct: 494 RRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 171/355 (48%), Gaps = 14/355 (3%)

Query: 95  GKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G+T N   +  D +   GC      Y+ L+E   +     +++++   M D G   +PD+
Sbjct: 180 GRTSNALAVLED-MFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGC--APDI 236

Query: 150 VQR--LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQ 203
           V    +++ +     V    +  + +   G       Y  ++ GL      E+A  +  +
Sbjct: 237 VTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEE 296

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           +  +G  PN+VT N ++  LC  G +  A  + + +   G  PN ++++ L++AFCK+ K
Sbjct: 297 MAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKK 356

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           + KA +   LM+     PD++ Y+ L+  L + G +    ELL    D+G    ++ +++
Sbjct: 357 IHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNT 416

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           V+D     G    A++  D M + G  P++I+YS +  GLC++ R+ EA   F +V    
Sbjct: 417 VIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMG 476

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL 438
           + P+   Y++++ G CK  +  +   L+  MI  G  P+    ++L+ GL  + L
Sbjct: 477 IRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGL 531



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 161/325 (49%), Gaps = 13/325 (4%)

Query: 106 DSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLV 158
           D + D GC      Y+ ++    + G++++++E    +   G    P+ V    ++  L 
Sbjct: 225 DEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGC--EPNTVSYNIVLKGLF 282

Query: 159 DSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
            +       KL   M  KG       +  L++ L R+G++E A  +  Q+ Q G  PN +
Sbjct: 283 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSL 342

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           + N +L   C   +I  A    ++++  G  P++V+++TL+ A C+  +++ A +L + +
Sbjct: 343 SYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQL 402

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
            +    P LI Y+ +IDGL KAG+ KE  ELL     +GL+ D++ +S++         +
Sbjct: 403 KDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRI 462

Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
             AV+T+ ++ + G  P    Y+ ++ GLC++     A  LF  ++     P+  TY+ L
Sbjct: 463 EEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTIL 522

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGL 419
           ++G    G +++   L+  +  RG+
Sbjct: 523 VEGLAYEGLVKEARELFAQLCSRGV 547


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 198/395 (50%), Gaps = 43/395 (10%)

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSC--LVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLR 190
           +I+ +   +  YL    ++  + C  L   +S    +  CR            ++  L++
Sbjct: 65  DIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRN-----------VLEHLMK 113

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
               +  +  ++++++ G+  ++   N ++ R C  G++  A S+FD +   G +P+VV+
Sbjct: 114 XKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVS 173

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           F+TL+N + K   L++ F+L N M    + PD+  YS+LI+GL K  R+ E N L    L
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEML 233

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
           D GL  + V F++++D +   G +  A+  Y +MLN GF P+V++Y+ LI GLC++G L 
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLK 293

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           +A  L  ++  + L+P  +TY++LIDG CK G L   F L + MIK  ++ D VV + LI
Sbjct: 294 QARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALI 353

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            GL                              C+  RA D  K+   M    +KPD  T
Sbjct: 354 FGL------------------------------CQEGRAVDAEKMLREMLRVGLKPDDET 383

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           +T+++     +G +  A  L  +M + G  P V+T
Sbjct: 384 YTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 179/382 (46%), Gaps = 40/382 (10%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  L+   L  G I +A    R   +  F     TC  +L+ L            +  +
Sbjct: 68  VFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEI 127

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   ++  F+ L++ FCKE ++  A  +++ + +                       
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKW---------------------- 165

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                        GL+  VV F+++M+ Y+ +GD+    +  + M   G  P+V +YS+L
Sbjct: 166 -------------GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVL 212

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC++ R+ EA GLFG++L   L P+ +T+++LIDG CK+G+L     +Y  M+ +G 
Sbjct: 213 INGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGF 272

Query: 420 KPDAVVCSLLINGL--MGD--ALRFFFQSV-RMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD V  + LI GL   GD    R+    + R  L P+   + TL+DG C+        +
Sbjct: 273 SPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFE 332

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M   +I+ D + +T LI G+  +G    A  +  +ML+ GL PD  TY+ I++   
Sbjct: 333 LRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFC 392

Query: 535 KGKNISVGLHMFKLMERNGVAP 556
           K  ++     + + M+RNG  P
Sbjct: 393 KKGDVKKASELLREMQRNGRVP 414



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 162/328 (49%), Gaps = 5/328 (1%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+ ++S LI    ++G +++  E          ++      +V++  +           Y
Sbjct: 65  DIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFY 124

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             +L  G+  ++  ++IL+   C++G +  A  +F  +    L PS++++++L++G+ K 
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L +GF L + M   G++PD    S+LINGL     M +A   F + +   L+PN   F
Sbjct: 185 GDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTF 244

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  R    + ++  M      PDV+T+  LI G+  +G L  A  L  +M +
Sbjct: 245 TTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSR 304

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL PD ITY+ +I G  K  ++     + + M +  +  D  +Y  L+  L +E     
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVD 364

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+  ++   GL+PD  TY  I+  +C
Sbjct: 365 AEKMLREMLRVGLKPDDETYTMIMNEFC 392



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 171/372 (45%), Gaps = 7/372 (1%)

Query: 231 NASSLFDVLLLVG--PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +AS++F  +L      + ++  FS LI A+ +   +  A + + L  +            
Sbjct: 47  SASAVFAAILETKGTQRSDIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRN 106

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +++ L K    K         L+ G    +  F+ +M  +   G++  A   +D +   G
Sbjct: 107 VLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWG 166

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V+S++ L+ G  + G L E   L   +    ++P + TYS LI+G CK  ++ +  
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEAN 226

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M+  GL P+ V  + LI     NG +  A+  + Q +     P++  +NTL+ G 
Sbjct: 227 GLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGL 286

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+         L   M    +KPD IT+T LI G   +G L +A  L  +M+K  +  D 
Sbjct: 287 CKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDD 346

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + Y+A+I GL +         M + M R G+ PD   Y +++N   K+ ++  A +L  +
Sbjct: 347 VVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLRE 406

Query: 584 LTDRGLEPDIIT 595
           +   G  P ++T
Sbjct: 407 MQRNGRVPCVVT 418



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 165/344 (47%), Gaps = 28/344 (8%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLL-----QS 77
           +K H   + F+    +L +L+K         F+K    C   P      ++L+     + 
Sbjct: 92  TKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILEC-GYPASLYFFNILMHRFCKEG 150

Query: 78  DMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAY 137
           +MR +A  VFD  + ++G         R S+  F      L+  Y+++G +DE   +   
Sbjct: 151 EMR-LAQSVFD-AITKWG--------LRPSVVSFNT----LMNGYIKLGDLDEGFRLKNA 196

Query: 138 MSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRK 191
           M   G+   PD+     L++ L   + + +   L   M   G       +  L++G  + 
Sbjct: 197 MRASGV--QPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G ++ A  ++RQ++ +GF P++VT N ++  LC  G +  A  L D +   G KP+ +T+
Sbjct: 255 GRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITY 314

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           +TLI+  CKE  LE AF+L   M++  +  D ++Y+ LI GL + GR  +  ++L   L 
Sbjct: 315 TTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLR 374

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            GLK D   ++ +M+ +   GDV +A +    M   G +P V++
Sbjct: 375 VGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 145/311 (46%), Gaps = 39/311 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ L+  + + G++  +  +F  ++  G+  S      LM+  +    + + ++L  AMR
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMR 198

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             G       Y  L+NGL ++  ++ A  +  +++  G VPN VT   ++   C NG++ 
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLD 258

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  ++  +L  G  P+VVT++TLI   CK+  L++A  L + M    L PD I Y+ LI
Sbjct: 259 LAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLI 318

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           DG  K G L+   EL    +   ++LD VV                              
Sbjct: 319 DGSCKEGDLETAFELRERMIKESIRLDDVV------------------------------ 348

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
                Y+ LI GLCQ+GR V+A  +  ++L   L+P   TY+ +++ FCK G ++    L
Sbjct: 349 -----YTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASEL 403

Query: 411 YDNMIKRGLKP 421
              M + G  P
Sbjct: 404 LREMQRNGRVP 414



 Score = 45.4 bits (106), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 52/122 (42%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           + D+   + LI      G +  AI  F    K        T   ++  L K K   +   
Sbjct: 63  RSDIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWG 122

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +K +   G    +  +N+L++   KE  +  A  +F  +T  GL P ++++NT++ GY 
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 605 SL 606
            L
Sbjct: 183 KL 184


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 208/428 (48%), Gaps = 10/428 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L  G    G++E +    +++            N ++      G    A +++ V+   G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +P+  TF+ L+NAF K  +++  ++L+  M   +  P++I YSILID + K G +++  
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           ++ L    RG + ++  ++S++D     G V +A   ++ M + G +   + Y+ LI GL
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
            + GR   A  LF ++L + L+P  +T++SL+ G   +G+  +   ++      G   D 
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
            + ++LI+ L     + +A   F +     L+P+++ FN LMDG C+  R  D   L   
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      PDV  +  LI G+   G +  A  L  +M   G  PDV+TY+ +I    KG  
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG----QLTDRGLEPDII 594
           I   L +F+ +   G A +   YN +LN L     +D A KLF     +  D  ++PD +
Sbjct: 420 IEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFV 478

Query: 595 TYNTIICG 602
           TY T++ G
Sbjct: 479 TYTTLLNG 486



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 189/360 (52%), Gaps = 6/360 (1%)

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            +++LI+AF K    +KA  +Y +M +  L PD   +++L++   KA R+    +L    
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
            ++    +V+ +S ++DA    G V +A++ +  M + G  PN+ +Y+ +I GL + G +
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHV 210

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  LF ++    L  + + Y+SLI G  +SG+      L+  M+ +GL+PD V  + L
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270

Query: 430 INGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           + GL       +A R F ++  +    ++ ++N L+D  C+ KR  +  ++F  +    +
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGL 330

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PDV T   L+ G+   G +  A +L   M + G TPDV  Y+ +I GL K   +     
Sbjct: 331 VPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +   M+  G  PD+  YN L++   K   ++ AL+LF +++ +G   + +TYNTI+ G C
Sbjct: 391 LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLC 449



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 211/431 (48%), Gaps = 20/431 (4%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           L   Y   G +++SVE    M      L+      L+   V +    +   + R M   G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 178 F----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  +  LMN   +   +++ + +  ++  +   PN++T + ++  +C  G +  A 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            +F  +   G +PN+ T++++I+   K   ++KAF L+  M    LV   ++Y+ LI GL
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT---YDRMLNGGFL 350
            ++GR     +L    L +GL+ D V F+S++    G+G  GRA +    +    + G  
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLV---YGLGVAGRASEARRIFQEARDVGCA 296

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +V  Y++LI  LC+  RL EA  +FG++    L P + T+++L+DG CKSG++ D F L
Sbjct: 297 LDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFIL 356

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
             +M + G  PD  V + LI+GL     + +A +   +   +   P++  +NTL+D  C+
Sbjct: 357 LGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCK 416

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG----LTP 521
             R  D ++LF  +       + +T+  ++ G+   G +  A  LF  M +      + P
Sbjct: 417 GGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDP 475

Query: 522 DVITYSAIIHG 532
           D +TY+ +++G
Sbjct: 476 DFVTYTTLLNG 486



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 192/405 (47%), Gaps = 15/405 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI+ +V+ G   +++ ++  M   G+         LM+    +  V   +KL   M+
Sbjct: 92  YNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQ 151

Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  L++ + + G +E A  +   +  RG  PNI T   ++  L  +G + 
Sbjct: 152 NQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVD 211

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  LF+ +   G     V +++LI+   +  + + A +L+  M+   L PD + ++ L+
Sbjct: 212 KAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLV 271

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL  AGR  E   +   A D G  LDV +++ ++D       +  A + +  +   G +
Sbjct: 272 YGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLV 331

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +++ L+ GLC+ GR+ +A  L G +      P +  Y++LIDG  KSG++ +   L
Sbjct: 332 PDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQL 391

Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M   G +PD V  + LI+     G + DALR F + +      N   +NT+++G C 
Sbjct: 392 LLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLF-EEISAKGFANTVTYNTILNGLCM 450

Query: 466 LKRATDTVKLFMLMGMYN----IKPDVITHTVLIRGIASQGSLSS 506
             R  +  KLF  M        I PD +T+T L+ G A Q  LS 
Sbjct: 451 AGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG-ARQAGLSE 494



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 175/401 (43%), Gaps = 38/401 (9%)

Query: 206 QRGFVPNIVTCNKILKRLCI----NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           QRG VP++  C  +++ L I    N      + +     ++ P+     F  L   +   
Sbjct: 12  QRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPR----IFIELARGYASA 67

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
             LEK+ +    M           Y+ LID   KAG  ++   +       GL+ D   F
Sbjct: 68  GLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTF 127

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           + +M+A+     V    + ++ M N    PNVI+YSILI  +C+ G + +A  +F  +  
Sbjct: 128 NVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKS 187

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
           R   P++ TY+S+IDG  KSG +   F L++ M   GL                      
Sbjct: 188 RGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGL---------------------- 225

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
                   +    ++N+L+ G  R  RA    KLF  M    ++PD +T T L+ G+   
Sbjct: 226 --------VATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVA 277

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G  S A  +F +    G   DV  Y+ +I  L K K +     +F  +E +G+ PD+  +
Sbjct: 278 GRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTF 337

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           N L++ L K   +  A  L G +   G  PD+  YNT+I G
Sbjct: 338 NALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDG 378



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 30/320 (9%)

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           I+  L  G   AG L++  E L         L    ++S++DA+V  G   +A+  Y  M
Sbjct: 56  IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVM 115

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
              G  P+  ++++L+    +  R+     LF ++  +   P+++TYS LID  CK G +
Sbjct: 116 GQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGV 175

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
                ++ +M  RG +P                              N+F + +++DG  
Sbjct: 176 EKALKVFLDMKSRGCRP------------------------------NIFTYTSMIDGLG 205

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +         LF  M    +    + +  LI G+   G   +A  LF +ML +GL PD +
Sbjct: 206 KSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHV 265

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           T++++++GL      S    +F+     G A D+ +YNVL++ L K   LD A ++FG+L
Sbjct: 266 TFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGEL 325

Query: 585 TDRGLEPDIITYNTIICGYC 604
            + GL PD+ T+N ++ G C
Sbjct: 326 EEDGLVPDVYTFNALMDGLC 345



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 133/269 (49%), Gaps = 37/269 (13%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQ------------------FGKTYNFFRLFRDSLGDF 111
           LIH L +S   D A+ +F +M+ +                   G+     R+F+++  D 
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEAR-DV 293

Query: 112 GCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVG 164
           GC      Y+ LI+   +  ++DE+ EIF  + + G  L PD+     LM  L  S  + 
Sbjct: 294 GCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDG--LVPDVYTFNALMDGLCKSGRIH 351

Query: 165 QYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
             + L   M+  G      VY  L++GL + G +E A  +  ++   G+ P++VT N ++
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME--MD 278
              C  G+I +A  LF+ +   G   N VT++T++N  C   ++++A++L+N M +  +D
Sbjct: 412 DESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVD 470

Query: 279 LV--PDLIIYSILIDGLFKAGRLKEGNEL 305
            V  PD + Y+ L++G  +AG  +  N L
Sbjct: 471 GVIDPDFVTYTTLLNGARQAGLSELANSL 499


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 232/479 (48%), Gaps = 17/479 (3%)

Query: 119 IENYVRIGKIDESVEIF--AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
           + + VR G++DE++ +   A   D G   +  L+++L +    S    +  ++  A  G 
Sbjct: 74  LRSLVRRGELDEALRLVGSARRPDAGTCAA--LIKKLSA----SGRTAEARRVLAAC-GP 126

Query: 177 GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLF 236
               Y  +M G    G ++ A    R   +R    +  TC+ +++ LC  G+  NA ++ 
Sbjct: 127 DVMAYNAMMAGYCGAGQVDAA---RRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVL 183

Query: 237 DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKA 296
           D +L     P+VVT++ L+ A CK +  ++A +L + M +    PD++ Y+++++G+ + 
Sbjct: 184 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 243

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           GR+ +  E L      G + + V ++ V+           A +    M   G  PNV+++
Sbjct: 244 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 303

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           ++LI  LC++G +  A  +  Q+      P+ L+Y+ L+  FCK  K+    +  D M+ 
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363

Query: 417 RGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           RG  PD V     + +L  +G +  A+    Q       P L  +NT++DG  +  +  +
Sbjct: 364 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 423

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            ++L   M    ++PD+IT++ +  G+  +  +  AI  F ++   G+ P+ + Y+AII 
Sbjct: 424 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 483

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           GL K +     + +F  M  NG  P+ + Y +L+  L  E  +  A  L  +L  RG E
Sbjct: 484 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEE 542



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 203/425 (47%), Gaps = 17/425 (4%)

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           +  L+R+G ++ A  +    +     P+  TC  ++K+L  +G+   A  +     L   
Sbjct: 74  LRSLVRRGELDEALRL----VGSARRPDAGTCAALIKKLSASGRTAEARRV-----LAAC 124

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
            P+V+ ++ ++  +C   +++ A +      E  +  D      LI GL   GR      
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAARRW---CAERAVERDAYTCDTLIRGLCGRGRTANALA 181

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           +L   L R    DVV ++ +++A        +A++  D M + G  P++++Y++++ G+C
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           Q+GR+ +A      +     EP+ ++Y+ ++ G C + +  D   L   M ++G  P+ V
Sbjct: 242 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301

Query: 425 VCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             ++LI+     GL+  AL    Q  +    PN   +N L+   C+ K+    +    LM
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                 PD++++  L+  +   G +  A+ L  Q+  +G  P +I+Y+ +I GL K    
Sbjct: 362 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 421

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              L +   M   G+ PDI  Y+ +   L +E  ++ A++ FG++ D G+ P+ + YN I
Sbjct: 422 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 481

Query: 600 ICGYC 604
           I G C
Sbjct: 482 ILGLC 486



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 163/338 (48%), Gaps = 36/338 (10%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           D + D GC      Y+ ++    + G++D+++E    +   G                + 
Sbjct: 219 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG---------------CEP 263

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           N+V                 Y  ++ GL      E+A  +  ++ Q+G  PN+VT N ++
Sbjct: 264 NTVS----------------YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 307

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC  G +  A  + + +   G  PN ++++ L++AFCK+ K++KA    +LM+     
Sbjct: 308 SFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 367

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
           PD++ Y+ L+  L ++G +    ELL    D+G    ++ +++V+D     G    A++ 
Sbjct: 368 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 427

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
            + M++ G  P++I+YS +  GLC++ R+ +A   FG+V    + P+ + Y+++I G CK
Sbjct: 428 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 487

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDAL 438
             +      L+  MI  G  P+    ++LI GL  + L
Sbjct: 488 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 525



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 7/206 (3%)

Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
           + G+L +   L    +    +PDA  C+ LI  L         + V     P++  +N +
Sbjct: 79  RRGELDEALRL----VGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAM 134

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           M G C   +  D  + +       ++ D  T   LIRG+  +G  ++A+ +  +ML+R  
Sbjct: 135 MAGYCGAGQ-VDAARRWC--AERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRC 191

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PDV+TY+ ++    K       + +   M   G  PDI  YNV++N + +E  +D A++
Sbjct: 192 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE 251

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCS 605
               L   G EP+ ++YN ++ G C+
Sbjct: 252 FLKNLPSYGCEPNTVSYNIVLKGLCT 277


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 235/496 (47%), Gaps = 39/496 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ L++++++ G+ DE+  +   M   G   S + V    ++S L     +    KL  +
Sbjct: 240 YNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDS 299

Query: 173 MR----GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           MR       F  Y  L+  LL +G +  A  +  ++   G +P +VT N I+  L    Q
Sbjct: 300 MRLSKKASSF-TYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQ 358

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A   F  +  +G  P+V+T+++L+N +CK   L++A  L   +    L P ++ Y+ 
Sbjct: 359 AEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNT 418

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDG  + G L E   L    +++G   DV  ++ +M+    + ++  A + +D ML+ G
Sbjct: 419 LIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKG 478

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+  +Y+  I           A  L   ++++ + P  +TY+ +IDG CK+G L+D  
Sbjct: 479 LQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAK 538

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
            L   M+  GL+PD +  + LI+       R   +  R                      
Sbjct: 539 RLKTKMVSDGLQPDCITYTCLIHA---HCERGLLREAR---------------------- 573

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
                KL   M    ++P V+T+T+L+     +G+L SA   F +ML  G+ P+ ITY+ 
Sbjct: 574 -----KLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNV 628

Query: 529 IIHGL-FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           +IH L   G+      H  +++ER G+AP+   Y +L++   +E N   A++L+ ++   
Sbjct: 629 LIHALCMTGRTPLAFRHFHEMLER-GLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQN 687

Query: 588 GLEPDIITYNTIICGY 603
           G+ PD  T+N +  G+
Sbjct: 688 GIPPDYCTHNALFKGF 703



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 235/490 (47%), Gaps = 28/490 (5%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           L+   L+   +D AS +  +M  Q G           SL D    ++ +I    R G ++
Sbjct: 243 LLDSFLKEGRKDEASMLLKEMETQGGGF---------SLNDV--TFNVVISFLAREGHLE 291

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLM 185
            +V++   M  +    S      L++ L++   V +   L   M  +G       Y  ++
Sbjct: 292 NAVKLVDSMR-LSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAII 350

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           +GLL+    E A     ++   G +P+++T N +L R C  G +  A  L   L   G  
Sbjct: 351 HGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLA 410

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           P V+T++TLI+ +C+   L +A +L   M+E    PD+  Y+IL++G  K   L    E 
Sbjct: 411 PTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREF 470

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
               L +GL+ D   +++ + A + +     A Q  + M+  G  P+ ++Y+++I GLC+
Sbjct: 471 FDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCK 530

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
            G L +A  L  +++   L+P  +TY+ LI   C+ G LR+   L + M+  GL+P  V 
Sbjct: 531 TGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVT 590

Query: 426 CSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            ++L++     G +  A  +F + + + + PN   +N L+   C   R     + F  M 
Sbjct: 591 YTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEML 650

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              + P+  T+T+LI G   +G+ + AI L+F+M + G+ PD  T++A+  G  +G    
Sbjct: 651 ERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDEG---- 706

Query: 541 VGLHMFKLME 550
              HM+  +E
Sbjct: 707 ---HMYHAIE 713



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 209/444 (47%), Gaps = 41/444 (9%)

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
           R V   G  P++  CN++L+ L    +  +  +++  +L +  +P +VT++TL+++F KE
Sbjct: 191 RLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKE 250

Query: 262 AKLEKAFQLYNLM------------------------------------MEMDLVPDLII 285
            + ++A  L   M                                    M +        
Sbjct: 251 GRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFT 310

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LI  L + G +++   L +   + G+   VV +++++   +       A   +  M 
Sbjct: 311 YNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMR 370

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G LP+VI+Y+ L+   C+ G L EA  L G +    L P++LTY++LIDG+C+ G L 
Sbjct: 371 AMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLA 430

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLM 460
           +   L + M+++G  PD    ++L+NG      +  A  FF + +   L P+ F +NT +
Sbjct: 431 EARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRI 490

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
                L       +L  +M +  I PD +T+ V+I G+   G+L  A  L  +M+  GL 
Sbjct: 491 CAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQ 550

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
           PD ITY+ +IH   +   +     +   M  +G+ P +  Y +L++   +  NL +A   
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGW 610

Query: 581 FGQLTDRGLEPDIITYNTIICGYC 604
           F ++ D G+EP+ ITYN +I   C
Sbjct: 611 FRKMLDVGIEPNEITYNVLIHALC 634



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 207/434 (47%), Gaps = 12/434 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRG--FVPNIVTCNKILKRLCINGQIGNASSLFD 237
            Y  L++  L++G  + A  + +++  +G  F  N VT N ++  L   G + NA  L D
Sbjct: 239 TYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVD 298

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            + L   K +  T++ LI A  +   + KA  L   M    ++P ++ Y+ +I GL K  
Sbjct: 299 SMRL-SKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCE 357

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           + +            GL  DV+ ++S+++ Y   G++  A+     +   G  P V++Y+
Sbjct: 358 QAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYN 417

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI G C+ G L EA  L  +++ +   P + TY+ L++G  K   L      +D M+ +
Sbjct: 418 TLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSK 477

Query: 418 GLKPDAV-----VCSLLINGLMGDALRFFFQSVRM--TLIPNLFIFNTLMDGCCRLKRAT 470
           GL+PD       +C+ L   L    + F  + V M   + P+   +N ++DG C+     
Sbjct: 478 GLQPDCFAYNTRICAELT--LSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLK 535

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           D  +L   M    ++PD IT+T LI     +G L  A  L   M+  GL P V+TY+ ++
Sbjct: 536 DAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILV 595

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           H   +  N+      F+ M   G+ P+   YNVL++ L        A + F ++ +RGL 
Sbjct: 596 HTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLA 655

Query: 591 PDIITYNTIICGYC 604
           P+  TY  +I G C
Sbjct: 656 PNKYTYTLLIDGNC 669



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 120/259 (46%), Gaps = 29/259 (11%)

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V   + +++ L    R  +   ++G++L  R+EP+++TY++L+D F K G+  + 
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
             L   M  +G                G +L             N   FN ++    R  
Sbjct: 257 SMLLKEMETQG---------------GGFSL-------------NDVTFNVVISFLAREG 288

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
              + VKL   M + + K    T+  LI  +  +G +  A  L  +M   G+ P V+TY+
Sbjct: 289 HLENAVKLVDSMRL-SKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYN 347

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           AIIHGL K +        F  M   G+ PD+  YN LLN   K  NL  AL L G L   
Sbjct: 348 AIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRA 407

Query: 588 GLEPDIITYNTIICGYCSL 606
           GL P ++TYNT+I GYC L
Sbjct: 408 GLAPTVLTYNTLIDGYCRL 426



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           L  F+L+  +GVAPD+   N +L +L      D    ++G++    +EP I+TYNT++
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLL 244


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 208/432 (48%), Gaps = 30/432 (6%)

Query: 158 VDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           V  ++V Q+ +L           +  ++  L++      A  + RQ+  +G  PN+VT N
Sbjct: 45  VVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLN 104

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++   C  GQ+  + S+   +L +G +P+ +T +TL+   C + +++++   ++ ++  
Sbjct: 105 ILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQ 164

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
               + + Y  L++GL K G  +   +LL    DR  + DVV++S+++D       V +A
Sbjct: 165 GFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQA 224

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
              +  M   G  PNVI+YS LI G C  G+L+ A  L  +++++ + P++ TY+ LID 
Sbjct: 225 YDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDA 284

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
            CK GK+++   L   M  +G   D V                               +N
Sbjct: 285 LCKEGKVKEAKKLLAEMHHKGQPADVVT------------------------------YN 314

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           +++DG C+ +       LFM M  + I+P+  T+T LI G+   G L +A  LF  +L +
Sbjct: 315 SVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVK 374

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G   DV TY+ +I GL K       L M   ME NG  P+   +++++  L ++   D A
Sbjct: 375 GCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKA 434

Query: 578 LKLFGQLTDRGL 589
            KL   +  +GL
Sbjct: 435 EKLLHGMIAKGL 446



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 185/382 (48%), Gaps = 7/382 (1%)

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
           I   + +  S F+ LLLV   P ++ F  ++    K      A  L   M    + P+L+
Sbjct: 42  IENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLV 101

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
             +ILI+     G++     +L   L  G + D +  +++M      G+V R++  +D++
Sbjct: 102 TLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKV 161

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +  GF  N +SY  L+ GLC+ G    A  L   +  R   P ++ YS++IDG CK   +
Sbjct: 162 VAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIV 221

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLING------LMGDALRFFFQSVRMTLIPNLFIFNT 458
              +  +  M  RG+ P+ +  S LI G      LMG A     + +   + PN++ +N 
Sbjct: 222 NQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMG-AFSLLNEMILKNINPNVYTYNI 280

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           L+D  C+  +  +  KL   M       DV+T+  ++ G+    +L  A  LF +M K G
Sbjct: 281 LIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWG 340

Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
           + P+  TY+A+I GL KG  +     +F+ +   G   D+  YNV+++ L KE   D AL
Sbjct: 341 IQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKAL 400

Query: 579 KLFGQLTDRGLEPDIITYNTII 600
            +  ++ D G  P+ +T++ II
Sbjct: 401 AMKSKMEDNGCIPNAVTFDIII 422



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 173/350 (49%), Gaps = 5/350 (1%)

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
           E  ++     +N ++ +   P +I +  ++  L K         L      +G++ ++V 
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVT 102

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
            + +++ +  +G +  +     ++L  G+ P+ I+ + L+KGLC +G +  +     +V+
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVV 162

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD---- 436
            +  + + ++Y +L++G CK G+ R    L   +  R  +PD V+ S +I+GL  D    
Sbjct: 163 AQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVN 222

Query: 437 -ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
            A  FF +     + PN+  ++TL+ G C   +      L   M + NI P+V T+ +LI
Sbjct: 223 QAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILI 282

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
             +  +G +  A  L  +M  +G   DV+TY++++ GL K +N+     +F  M++ G+ 
Sbjct: 283 DALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQ 342

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           P+   Y  L++ L K   L  A KLF  L  +G   D+ TYN +I G C 
Sbjct: 343 PNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCK 392



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 155/322 (48%), Gaps = 4/322 (1%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + LI  +  +G++  S  +   +  +G       +  LM  L     V +       +  
Sbjct: 104 NILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVA 163

Query: 176 KGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF +    Y  L+NGL + G    A  + R +  R   P++V  + I+  LC +  +  
Sbjct: 164 QGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQ 223

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A   F  +   G  PNV+T+STLI  FC   +L  AF L N M+  ++ P++  Y+ILID
Sbjct: 224 AYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILID 283

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G++KE  +LL     +G   DVV ++SV+D      ++ +A   + +M   G  P
Sbjct: 284 ALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQP 343

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N  +Y+ LI GLC+ GRL  A  LF  +L++     + TY+ +I G CK G      ++ 
Sbjct: 344 NKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMK 403

Query: 412 DNMIKRGLKPDAVVCSLLINGL 433
             M   G  P+AV   ++I  L
Sbjct: 404 SKMEDNGCIPNAVTFDIIIRSL 425



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 80/176 (45%)

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
           I  ++ D +  F + + +   P +  F  ++    ++K     + L   M +  I+P+++
Sbjct: 42  IENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLV 101

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T  +LI      G ++ +  +  ++LK G  PD IT + ++ GL     +   LH    +
Sbjct: 102 TLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKV 161

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
              G   +   Y  LLN L K      A+KL   + DR   PD++ Y+TII G C 
Sbjct: 162 VAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCK 217



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 110/240 (45%), Gaps = 4/240 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I+   +   ++++ + F+ M+  GI+ +      L+     +  +   + L   M 
Sbjct: 208 YSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMI 267

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K        Y  L++ L ++G ++ A  +  ++  +G   ++VT N +L  LC +  + 
Sbjct: 268 LKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLD 327

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A++LF  +   G +PN  T++ LI+  CK  +L+ A +L+  ++      D+  Y+++I
Sbjct: 328 KATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMI 387

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K G   +   +     D G   + V F  ++ +     +  +A +    M+  G L
Sbjct: 388 SGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score = 39.7 bits (91), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/136 (19%), Positives = 61/136 (44%)

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           DTV  F  + +    P +I    ++  +       +AI L  QM  +G+ P+++T + +I
Sbjct: 48  DTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILI 107

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
           +       ++    +   + + G  PD    N L+  L  +  +  +L    ++  +G +
Sbjct: 108 NCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQ 167

Query: 591 PDIITYNTIICGYCSL 606
            + ++Y T++ G C +
Sbjct: 168 MNQVSYGTLLNGLCKI 183


>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
          Length = 561

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 213/435 (48%), Gaps = 16/435 (3%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           + + + G    G I  +F +  Q  + G V N++ CN  + RL  +G+   A  LF  + 
Sbjct: 19  WAWKLRGKRMSGHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMA 78

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             G  PN VT++ LI++ CK   +E A  +++ M E  +   +  Y+ LI+G  K     
Sbjct: 79  DRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFH 138

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +   LL   + +GL      +S ++      GD+  A++ +  M       NV +++ LI
Sbjct: 139 QARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALI 198

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ G + EA  LF +++   L P+ +T++ +I+G+C+ G +R  F LYD M+ RGL 
Sbjct: 199 SGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLT 258

Query: 421 PD--------AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           PD        +VVC  L  G M  A  F         + N F    LM G C+   A   
Sbjct: 259 PDNYTYRSLISVVCLTL--GAM-KAKEFVADLENNCAVLNSFSLTALMHGFCKEGSAEIL 315

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            K  ML G +   P+  T+   +  +A++G L  A +L   ML+ G   + +T++ +I G
Sbjct: 316 CKE-MLAGHF--LPNSYTYNCFLDYLANEGELEKAKVLHAAMLE-GCLANTVTFNTLIKG 371

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
                 I   + + +    +G  PD   Y+ ++N L K  + + A +L+ ++  +GL+PD
Sbjct: 372 FCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPD 431

Query: 593 IITYNTIICGYCSLN 607
           I+ Y TI+  +C+++
Sbjct: 432 IVAY-TILIRWCNIH 445



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 187/430 (43%), Gaps = 44/430 (10%)

Query: 95  GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           G+     +LFR  + D G D     Y+ LI +  + G +++++ +F  M + GI ++   
Sbjct: 65  GRYREAEKLFR-GMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYP 123

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVI 205
              L++     N+  Q   L   M  KG       Y  L+ GL RKG + +A  +HR++ 
Sbjct: 124 YNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMT 183

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           +     N+ T   ++   C +G +  A+ LF  ++     PN VTF+ +I  +C+   + 
Sbjct: 184 RNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIR 243

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           KAFQLY+ M++  L PD   Y  LI  +       +  E +    +    L+    +++M
Sbjct: 244 KAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALM 303

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
               G    G A      ML G FLPN  +Y+  +  L  +G L +A  L   +L   L 
Sbjct: 304 H---GFCKEGSAEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLEGCL- 359

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSV 445
            + +T+++LI GFC +G+++    L     + G  PD +  S +IN L            
Sbjct: 360 ANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINEL------------ 407

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
                             C++       +L+  M    +KPD++ +T+LIR     G   
Sbjct: 408 ------------------CKVGDTNKAFELWNEMLYKGLKPDIVAYTILIRWCNIHGEFD 449

Query: 506 SAILLFFQML 515
             + ++  M+
Sbjct: 450 KGLGIYSDMV 459



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 194/459 (42%), Gaps = 54/459 (11%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVG------QYYKLCRAMRGKGF- 178
           G I +S  +      +GI      V  L++C    + +G      +  KL R M  +G  
Sbjct: 30  GHIHKSFRLTGQNCKLGI------VANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLD 83

Query: 179 ---CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
                Y  L++ L ++G++E+A  M  ++ ++G    +   N ++   C +     A  L
Sbjct: 84  PNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGL 143

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
            + ++  G  P+  ++S LI   C++  L  A +L+  M    +  ++  ++ LI G  K
Sbjct: 144 LNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCK 203

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
            G + E   L    ++  L  + V F+ +++ Y  +G++ +A Q YD+ML+ G  P+  +
Sbjct: 204 DGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYT 263

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           Y  LI  +C     ++A      +       +  + ++L+ GFCK G             
Sbjct: 264 YRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEGSAE---------- 313

Query: 416 KRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
                   ++C  ++ G                 +PN + +N  +D     +   +  K+
Sbjct: 314 --------ILCKEMLAG---------------HFLPNSYTYNCFLDYLAN-EGELEKAKV 349

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
                +     + +T   LI+G    G +  AI L  +  + G  PD I+YS II+ L K
Sbjct: 350 LHAAMLEGCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCK 409

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
             + +    ++  M   G+ PDI  Y +    LI+ CN+
Sbjct: 410 VGDTNKAFELWNEMLYKGLKPDIVAYTI----LIRWCNI 444



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 139/348 (39%), Gaps = 65/348 (18%)

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           + K+F+L     ++ +V +L+  +  ID L K GR +E  +L     DRGL         
Sbjct: 32  IHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLD-------- 83

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
                                      PN ++Y+ILI  LC++G + +A  +F ++  + 
Sbjct: 84  ---------------------------PNEVTYAILIHSLCKRGMMEDALCMFDRMREKG 116

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQ 443
           +  ++  Y+SLI+G+CK         L + M+ +GL P     S LI GL          
Sbjct: 117 IRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGL---------- 166

Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
                               CR       ++L   M    +  +V T T LI G    G+
Sbjct: 167 --------------------CRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGN 206

Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
           +  A  LF +M++  L P+ +T++ +I G  +  NI     ++  M   G+ PD   Y  
Sbjct: 207 MDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRS 266

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLI 611
           L++++        A +    L +     +  +   ++ G+C   S  I
Sbjct: 267 LISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEGSAEI 314



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 179/419 (42%), Gaps = 53/419 (12%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI 92
           NA +  L K      A + F+   +    PN    A LIH L +  M + A  +FD+M  
Sbjct: 55  NAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMR- 113

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           + G     +             Y+ LI  Y +     ++  +   M   G+  SP     
Sbjct: 114 EKGIRMTVY------------PYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSP 161

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFC--VYEF--LMNGLLRKGVIENAFHMHRQVIQRG 208
           L++ L     +    +L R M        VY F  L++G  + G ++ A  +  ++++  
Sbjct: 162 LIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESS 221

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFC--------K 260
            VPN VT N +++  C  G I  A  L+D +L  G  P+  T+ +LI+  C        K
Sbjct: 222 LVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAK 281

Query: 261 E--AKLEK------AFQLYNLMM-------------EM---DLVPDLIIYSILIDGLFKA 296
           E  A LE       +F L  LM              EM     +P+   Y+  +D L   
Sbjct: 282 EFVADLENNCAVLNSFSLTALMHGFCKEGSAEILCKEMLAGHFLPNSYTYNCFLDYLANE 341

Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
           G L++  ++L  A+  G   + V F++++  +   G +  A+    +    GF P+ ISY
Sbjct: 342 GELEKA-KVLHAAMLEGCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISY 400

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           S +I  LC+ G   +A  L+ ++L + L+P ++ Y+ LI      G+   G  +Y +M+
Sbjct: 401 STIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGIYSDMV 459



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 30/252 (11%)

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +++  ++G    G + ++  L GQ     +  +LL  ++ ID   K G+ R+   L+  M
Sbjct: 18  NWAWKLRGKRMSGHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGM 77

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
             RGL P+ V  ++LI+ L                              C+     D + 
Sbjct: 78  ADRGLDPNEVTYAILIHSL------------------------------CKRGMMEDALC 107

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +F  M    I+  V  +  LI G     +   A  L  +M+ +GLTP   +YS +I GL 
Sbjct: 108 MFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLC 167

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +  +++  + + + M RN V+ ++  +  L++   K+ N+D A +LF ++ +  L P+ +
Sbjct: 168 RKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEV 227

Query: 595 TYNTIICGYCSL 606
           T+N +I GYC +
Sbjct: 228 TFNVMIEGYCRV 239



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 57/114 (50%)

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           +RG    G +  +  L  Q  K G+  +++  +A I  L K         +F+ M   G+
Sbjct: 23  LRGKRMSGHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGL 82

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            P+   Y +L++ L K   ++ AL +F ++ ++G+   +  YN++I GYC  N+
Sbjct: 83  DPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNN 136


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 248/505 (49%), Gaps = 29/505 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I   V+ G +  ++E+F  M + G  L PD++    + ++D      ++K    ++
Sbjct: 187 YGTVINGMVKSGDLVSALEVFDEMFERG--LVPDVM--CYNIMIDG-----FFKRGDYVQ 237

Query: 175 GK--------GFCVY------EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
           GK        G CVY        ++NGL + G  + +  M  ++ +     ++ T + ++
Sbjct: 238 GKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLI 297

Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             LC  G +  A  ++  ++      +VVT++ L+N FC+  K++++F+L+ +MM  +  
Sbjct: 298 CGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW-VMMGKENC 356

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
            +++ Y+I I GLF+  +++E   +      RG   D   +  ++      G + +A++ 
Sbjct: 357 HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKI 416

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
                +GG   +  +YS ++ GL +QGR+ EA G+  Q+     E S    + LI+GF +
Sbjct: 417 LKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVR 476

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFI 455
           + KL +    +  M  +G  P  V  + LINGL       DA  F  + +     P++  
Sbjct: 477 ASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMIT 536

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           ++ LMDG C+ K+    + L+  + +  ++PDV  H +L+ G+ S G +  A+LL+  M 
Sbjct: 537 YSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMK 596

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
           +    P+++T++ ++ GL+K +   +   ++  M +NG  PDI  YN+ L  L     + 
Sbjct: 597 QSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRIS 656

Query: 576 AALKLFGQLTDRGLEPDIITYNTII 600
             + LF      G+ P  IT+  ++
Sbjct: 657 DGIALFDDALKNGILPTSITWYILV 681



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/544 (23%), Positives = 251/544 (46%), Gaps = 49/544 (9%)

Query: 111 FGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ 165
           FGC      Y+ L+  ++    ++++    AY   +GI  +      L+   V      +
Sbjct: 108 FGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVE 167

Query: 166 YYKLCRAMRGKGFC--VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
              L   M  K     VY +  ++NG+++ G + +A  +  ++ +RG VP+++  N ++ 
Sbjct: 168 AKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMID 227

Query: 222 RLCINGQIGNASSLFDVLLLVG-PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
                G       +++ L+      PNVVT++ +IN  CK  + +++ +++  M + +  
Sbjct: 228 GFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECE 287

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD------- 333
            DL  YS LI GL   G +    E+    + R + +DVV ++++++ +   G        
Sbjct: 288 MDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFEL 347

Query: 334 ---------------------------VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
                                      V  A+  ++ +   G   +  +Y +LI GLC+ 
Sbjct: 348 WVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKN 407

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G L +A  +  +      +     YSS++DG  K G++ +   +   M K G +    VC
Sbjct: 408 GHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC 467

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + LING      + +A+ FF +       P +  +NTL++G C+ +R +D       M  
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLE 527

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
            + KPD+IT+++L+ G+     +  A+ L+ Q+L +GL PDV  ++ ++HGL     I  
Sbjct: 528 KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIED 587

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
            L ++  M+++   P++  +N L++ L K    + A  ++  +   G +PDII+YN  + 
Sbjct: 588 ALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLK 647

Query: 602 GYCS 605
           G CS
Sbjct: 648 GLCS 651



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 229/471 (48%), Gaps = 45/471 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    ++G+ DES+E++  M             +   C +D               
Sbjct: 258 YNVMINGLCKMGRFDESLEMWERM-------------KKNECEMD--------------- 289

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+ GL   G ++ A  +++++++R  V ++VT N +L   C  G+I  +  
Sbjct: 290 ---LFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKES-- 344

Query: 235 LFDVLLLVGPK--PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
            F++ +++G +   NVV+++  I    +  K+E+A  ++ L+       D   Y +LI G
Sbjct: 345 -FELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHG 403

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG--FL 350
           L K G L +  ++L  A D G KLD   +SS++D     G V  A+    +M   G    
Sbjct: 404 LCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELS 463

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V +   LI G  +  +L EA   F ++  +   P++++Y++LI+G CK+ +  D +S 
Sbjct: 464 PHVCN--PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSF 521

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M+++  KPD +  SLL++GL     +  AL  + Q +   L P++ + N LM G C 
Sbjct: 522 VKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCS 581

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             +  D + L+  M   N  P+++TH  L+ G+        A +++  M K G  PD+I+
Sbjct: 582 AGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIIS 641

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           Y+  + GL     IS G+ +F    +NG+ P    + +L+  ++K   LD+
Sbjct: 642 YNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDS 692



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 201/405 (49%), Gaps = 42/405 (10%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           + G KP + +++ L+NAF +   LEKA         + ++P+L  Y+ILI    K  +  
Sbjct: 107 IFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFV 166

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           E   LL     + LK DV  + +V++  V  GD+  A++ +D M   G +P+V+ Y+I+I
Sbjct: 167 EAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMI 226

Query: 361 KGLCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
            G  ++G  V+   ++ +++    + P+++TY+ +I+G CK G+  +   +++ M K   
Sbjct: 227 DGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNEC 286

Query: 420 KPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + D     +++C L   G +  A+  + + V+ +++ ++  +N L++G CR  +  ++ +
Sbjct: 287 EMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFE 346

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L+++MG  N   +V+++ + IRG+     +  AI ++  + +RG   D  TY  +IHGL 
Sbjct: 347 LWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLC 405

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIY--------------------------------- 561
           K  +++  L + K  +  G   D   Y                                 
Sbjct: 406 KNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPH 465

Query: 562 --NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             N L+N  ++   L+ A+  F ++  +G  P +++YNT+I G C
Sbjct: 466 VCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLC 510


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/499 (23%), Positives = 243/499 (48%), Gaps = 29/499 (5%)

Query: 128 IDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG----KGFCVYEF 183
           + E++  F  M  M    +      L   L           +C  M      K F     
Sbjct: 88  LHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNI 147

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+N L     +   F +   ++++G+ PN  T   ++K LC+ G+IG A  +F ++ +  
Sbjct: 148 LLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFD 207

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME------MDLVPDLIIYSILIDGLFKAG 297
            +P+ +T   LI+  C+      A +L+  M+       ++  P ++ YS +ID L K G
Sbjct: 208 CRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDG 267

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
            ++   E  +   ++G+  +VV ++S++       +   A + +  M++ G LP+V+++S
Sbjct: 268 LVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFS 327

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           +LI  LC+ G++ EA GLF  ++ R +EPS  TY+ LI+G+C +G + +G  ++ +M+ +
Sbjct: 328 VLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNK 387

Query: 418 GLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
             + DA   S+L+     D     A+  + + +   + P +  ++          +  D 
Sbjct: 388 RCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYS----------KVGDA 437

Query: 473 VKLFMLMGMYNIKPDVITHT---VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
            KLF  +   ++  D I+++   V + G+   G +S A+ +F+ +       +V  ++++
Sbjct: 438 RKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSL 497

Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           I+G+ + + + +   +F  +    + PD+  Y +++  L K      A  LF ++ ++G 
Sbjct: 498 INGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGC 557

Query: 590 EPDIITYNTIICGYCSLNS 608
            P+++T+NT++ G C LNS
Sbjct: 558 APNVVTFNTLMRGLC-LNS 575



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 204/422 (48%), Gaps = 16/422 (3%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL-- 241
           L+ GL  +G I  A  + + +      P+ +TC  ++  LC  G   NA  L + ++   
Sbjct: 183 LVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGN 242

Query: 242 ----VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
               +  KP VV++S +I++ CK+  +E+A + +  M E  + P+++ Y+ L+ GL  A 
Sbjct: 243 SDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSAS 302

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
             +E   L +  +D GL  DVV FS ++ A   +G V  A   +D M+     P+  +Y+
Sbjct: 303 EWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYN 362

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           ILI+G C  G + E   +F  ++ +R +    +YS L+  +CK  ++     LY  M+ R
Sbjct: 363 ILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDR 422

Query: 418 GLKPDAVVCSLLINGLMGDALRFF----FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
           G++P  +  S +     GDA + F    FQ + +  I +  I+N  +DG C+    ++ +
Sbjct: 423 GIQPTVITYSKV-----GDARKLFGEIQFQDMVLDSI-SYSIYNVYLDGLCKNGCVSEAL 476

Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            +F  +       +V     LI G+     L  A  LF ++    L PDV+TY+ +I+GL
Sbjct: 477 DVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGL 536

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
            K         +F  ME  G AP++  +N L+  L         ++L  ++  R L PD 
Sbjct: 537 CKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDA 596

Query: 594 IT 595
            T
Sbjct: 597 ST 598



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 170/376 (45%), Gaps = 16/376 (4%)

Query: 240 LLVGPKPNVVTFSTL-----INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L +   PN  + + L     IN    +  L +A   +N M+ M   P L  ++ L   L 
Sbjct: 59  LPINSTPNTQSDNPLEQFLEINCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALA 118

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K  +      +       GL  + +  + +++    +  V      +  +L  G+ PN  
Sbjct: 119 KKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTR 178

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +++ L+KGLC +G++ EA  +F  + +    PS +T   LI G C++G   +   L++ M
Sbjct: 179 TFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAM 238

Query: 415 IKRG------LKPDAVVCSLLINGLMGDAL-----RFFFQSVRMTLIPNLFIFNTLMDGC 463
           I          KP  V  S +I+ L  D L      FF +     + PN+  + +L+ G 
Sbjct: 239 INGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGL 298

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C      +  +LF+ M  + + PDV+T +VLI  +   G +  A  LF  M++R + P  
Sbjct: 299 CSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPST 358

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
            TY+ +I G      +  G  +F  M       D   Y++L+    K+  +  A+ L+ +
Sbjct: 359 RTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYRE 418

Query: 584 LTDRGLEPDIITYNTI 599
           + DRG++P +ITY+ +
Sbjct: 419 MMDRGIQPTVITYSKV 434



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 184/414 (44%), Gaps = 59/414 (14%)

Query: 95  GKTYNFFRLFRDSL---GDFGCD-------YSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
           G T N  +L    +    DFG +       YS +I++  + G ++ + E F  M + GI+
Sbjct: 226 GNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIF 285

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQV 204
             P++V                              Y  L++GL      E A  +  ++
Sbjct: 286 --PNVV-----------------------------TYTSLLHGLCSASEWEEAKRLFIEM 314

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           +  G +P++VT + ++  LC  G++  AS LFD+++    +P+  T++ LI  +C    +
Sbjct: 315 VDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMV 374

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           ++  +++  M+      D   YSIL+    K   +     L    +DRG++  V+ +S V
Sbjct: 375 DEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKV 434

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI---LIKGLCQQGRLVEACGLFGQVLI 381
            DA    G+    +Q  D +L+       ISYSI    + GLC+ G + EA  +F  +  
Sbjct: 435 GDARKLFGE----IQFQDMVLDS------ISYSIYNVYLDGLCKNGCVSEALDVFYGLEN 484

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----D 436
            +   ++  ++SLI+G C+S KL   + L++ +    L+PD V  +++I GL        
Sbjct: 485 CKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQK 544

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           A   F +       PN+  FNTLM G C        V+L   M    + PD  T
Sbjct: 545 AYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDAST 598



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 113/274 (41%), Gaps = 59/274 (21%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LIE Y   G +DE  +IF  M +                           K C+   
Sbjct: 361 YNILIEGYCLAGMVDEGKKIFLSMVN---------------------------KRCQHDA 393

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI--------------- 219
           G     Y  LM    +   +  A  ++R+++ RG  P ++T +K+               
Sbjct: 394 GS----YSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDM 449

Query: 220 -------------LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
                        L  LC NG +  A  +F  L       NV  F++LIN  C+  KLE 
Sbjct: 450 VLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEI 509

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A++L+N +    L PD++ Y+I+I GL K G+ ++  +L L   ++G   +VV F+++M 
Sbjct: 510 AWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMR 569

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
                 +  + V+   +M      P+  +  I++
Sbjct: 570 GLCLNSERPKIVELLHKMAARKLSPDASTLLIVM 603



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 68/149 (45%)

Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
           S ++  +Y L          ++  L+NG+ R   +E A+ +  ++      P++VT   +
Sbjct: 473 SEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIM 532

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +  LC  GQ   A  LF  +   G  PNVVTF+TL+   C  ++  K  +L + M    L
Sbjct: 533 IYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKL 592

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLT 308
            PD     I++D L K     E   LL T
Sbjct: 593 SPDASTLLIVMDILLKDENYHECLNLLPT 621


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 190/384 (49%), Gaps = 56/384 (14%)

Query: 201 HRQVIQRG--------------FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
           HR+ +QR                VP  VT N ++  LC   +   A  L + ++  G  P
Sbjct: 28  HRRALQRWPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIP 87

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
           ++ T++TLI  FCK  K + A +++  ++     PD++ YS LIDGL K GRLKE  +L 
Sbjct: 88  DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF 147

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
                                       GR +++      G  +PN ++Y+ LI G C+ 
Sbjct: 148 ----------------------------GRMIKS------GSCMPNTVTYNSLISGFCRM 173

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
           G++ EA  L  ++      P ++TY++L++GFCK  +L D + L + M ++GL P+ V  
Sbjct: 174 GKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTF 233

Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           + L++GL     + DA+    +  R +  P ++ +NT++DG CR+ +  +  K FML  M
Sbjct: 234 TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARK-FMLEEM 292

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
            +  P+V++  ++IRG+      S A+ L  +  +R   PDV+ Y+ +I  L + K +  
Sbjct: 293 -DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDE 351

Query: 542 GLHMF-KLMERNGVAPDIAIYNVL 564
              ++ K++E  G  P+   Y+  
Sbjct: 352 ACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 176/332 (53%), Gaps = 9/332 (2%)

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
           + + + VP  + Y+ LI GL KA R  E  +LL   +  G   D+  +++++  +     
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR-RLEPSLLTYS 392
              A++ +++++  GF P+V++YS LI GLC++GRL EA  LFG+++      P+ +TY+
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM 447
           SLI GFC+ GK+ +  +L + M + G  PD V  + L+NG      + DA     Q  R 
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            L PN+  F +LMDG CR  R +D V +   M   +  P V T+  ++ G      L  A
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA 284

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
                + +     P+V++++ +I GL K    S  + + +   R    PD+ +Y  ++++
Sbjct: 285 RKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342

Query: 568 LIKECNLDAALKLFGQ-LTDRGLEPDIITYNT 598
           L +E  +D A +++ + L + G  P+ ITY+T
Sbjct: 343 LCREKKVDEACRVYRKMLEEPGCLPNSITYST 374



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 153/290 (52%), Gaps = 14/290 (4%)

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
            +  + G    G AVQ  +       +P  ++Y+ LI GLC+  R  EA  L  +++   
Sbjct: 31  ALQRWPGRRGCGAAVQDAEE------VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSG 84

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
             P + TY++LI GFCKS K  D   +++ ++ RG +PD V  S LI+GL     + +A+
Sbjct: 85  CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 144

Query: 439 RFFFQSVRM-TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
             F + ++  + +PN   +N+L+ G CR+ +  + + L   M      PDV+T+T L+ G
Sbjct: 145 DLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 204

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
                 L  A  L  QM ++GLTP+V+T+++++ GL +   +S  +H+   M R   +P 
Sbjct: 205 FCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT 264

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +  YN +L+   +   L+ A K    L +    P+++++N +I G C +N
Sbjct: 265 VYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVN 312



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 158/313 (50%), Gaps = 35/313 (11%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  + +  K D+++ +F  +   G    PD+V    SCL+D               
Sbjct: 92  YTTLITGFCKSKKSDDALRVFEQLVARG--FRPDVVT--YSCLID--------------- 132

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGF-VPNIVTCNKILKRLCINGQIGNAS 233
                       GL ++G ++ A  +  ++I+ G  +PN VT N ++   C  G++  A 
Sbjct: 133 ------------GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 180

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           +L + +   G  P+VVT++TL+N FCK A+L+ A+ L N M    L P+++ ++ L+DGL
Sbjct: 181 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGL 240

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            +  RL +   +L     +     V  +++++D Y  +  +  A +     ++    PNV
Sbjct: 241 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--CPPNV 298

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           +S++I+I+GLC+  R  EA  L  +   RR  P ++ Y+++ID  C+  K+ +   +Y  
Sbjct: 299 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRK 358

Query: 414 MIKR-GLKPDAVV 425
           M++  G  P+++ 
Sbjct: 359 MLEEPGCLPNSIT 371


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 204/402 (50%), Gaps = 16/402 (3%)

Query: 222 RLCINGQIG--NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           R C  G I    A   FD+++   P P + +F+ L+    K     + F LYN M    L
Sbjct: 62  RNCKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGL 121

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG---R 336
            PDL   +IL + L    R+ EG   +   L RG   D+V +++++    G+  VG    
Sbjct: 122 SPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDE 181

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A + ++ M   G +PNVISYS L+ G C  G+L E+  LF +++ + ++P+L+ ++ LID
Sbjct: 182 AKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLID 241

Query: 397 GFCKSGKLRD---GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
             CK GK+ D      L+ +M  +G + + +  ++LING      + +A+  + +  ++ 
Sbjct: 242 ILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVG 301

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
             PN+  ++TL+ G  +  +  D  KLF +M    I  D   + + + G+   G L  A+
Sbjct: 302 KRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAM 361

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            LF ++       D  +YS +I GL K   + +    FK + + G+ P++   N++++  
Sbjct: 362 ELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGF 421

Query: 569 IKECNLDAALKLF---GQLTDRGLEPDIITYNTIICGYCSLN 607
            +   +D A  LF    ++ + G  PDIITYNT++ G+C  N
Sbjct: 422 CRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESN 463



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 203/405 (50%), Gaps = 14/405 (3%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           AFH    +++   +P I + N++L  L          SL++ + L G  P++ T + L N
Sbjct: 74  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILAN 133

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF---KAGRLKEGNELLLTALDRG 313
             C   ++ +       ++    +PD++ Y+ LI GL+   K G   E  E+      +G
Sbjct: 134 CLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQG 193

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR---LV 370
           +  +V+ +SS++  +   G +  + + ++ M++ G  PN++ +++LI  LC++G+   L 
Sbjct: 194 MIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLS 253

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
            A  LF  +  +  E + ++Y+ LI+G+CK  K+ +  +LY+ M + G +P+    S L+
Sbjct: 254 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 313

Query: 431 NGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
            GL+     GDA + F       +  +  I+   +DG C+     + ++LF  +  YN K
Sbjct: 314 TGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFK 373

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
            D  +++ LI G+   G +  A   F Q+ + GL P+V+T + +IHG  + + +     +
Sbjct: 374 LDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANIL 433

Query: 546 FKLMER---NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           F+ ME+   NG  PDI  YN LL    +   L+  + L  ++  R
Sbjct: 434 FEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 478



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 185/384 (48%), Gaps = 18/384 (4%)

Query: 152 RLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQR 207
           RL+  L   N   Q + L   MR  G          L N L     +         +++R
Sbjct: 95  RLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRR 154

Query: 208 GFVPNIVTCNKILKRL---CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
           G++P+IVT N ++K L   C  G    A  +F+ +   G  PNV+++S+L++ FC   KL
Sbjct: 155 GYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKL 214

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR---LKEGNELLLTALDRGLKLDVVVF 321
           E++ +L+N M++  + P+L+ +++LID L K G+   L    +L L+   +G + + + +
Sbjct: 215 EESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISY 274

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           + +++ Y  I  V  A+  Y+ M   G  PNV +YS L+ GL Q G++ +A  LFG +  
Sbjct: 275 TILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKA 334

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD----- 436
             +      Y   +DG CK+G L +   L++ +     K D    S LI+GL        
Sbjct: 335 SGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEI 394

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN---IKPDVITHTV 493
           A  FF Q  +  L PN+   N ++ G CR+++      LF  M         PD+IT+  
Sbjct: 395 AWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNT 454

Query: 494 LIRGIASQGSLSSAILLFFQMLKR 517
           L+RG      L   + L  +M KR
Sbjct: 455 LLRGFCESNKLEEVVNLLHKMFKR 478



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 161/338 (47%), Gaps = 11/338 (3%)

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           +L P   + S +   + +       N +LL   DRG+     + S + +   G  DV +A
Sbjct: 15  NLSPLCTLSSPIPSSVPQTSSTNHPNPILLAFNDRGISFQHRLSSFLRNCKTGNIDVIQA 74

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
              +D M+    +P + S++ L+ GL +     +   L+ ++ +  L P L T + L + 
Sbjct: 75  FHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANC 134

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-------DALRFFFQSVRMT-L 449
            C   ++ +G +    +++RG  PD V  + LI GL G       D  +  F+ ++   +
Sbjct: 135 LCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGM 194

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS---LSS 506
           IPN+  +++L+ G C   +  ++ +LF  M    ++P+++   VLI  +  +G    LSS
Sbjct: 195 IPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSS 254

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  LF  M  +G   + I+Y+ +I+G  K   +   ++++  M + G  P++  Y+ LL 
Sbjct: 255 ARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLT 314

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            L++   +  A KLFG +   G+  D   Y   + G C
Sbjct: 315 GLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLC 352



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 149/316 (47%), Gaps = 29/316 (9%)

Query: 80  RDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMS 139
            D A  +F++M  Q G   N               YS L+  +   GK++ES  +F  M 
Sbjct: 179 EDEAKEIFEEMKAQ-GMIPNVI------------SYSSLVHGFCCAGKLEESKRLFNEMV 225

Query: 140 DMGIYLSPDLVQ--RLMSCLVDSNSVG---QYYKLCRAMRGKGFC-----VYEFLMNGLL 189
           D G+   P+LVQ   L+  L     +G      KL  +M  KG C      Y  L+NG  
Sbjct: 226 DQGV--QPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKG-CEHNEISYTILINGYC 282

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           +   +E A +++ ++ Q G  PN+ T + +L  L   G++G+A+ LF V+   G   +  
Sbjct: 283 KIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSC 342

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            +   ++  CK   L +A +L+N +   +   D   YS LIDGL KAG+++   E     
Sbjct: 343 IYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQL 402

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRA---VQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
              GL+ +VV  + ++  +  +  V +A    +  ++M   G  P++I+Y+ L++G C+ 
Sbjct: 403 SQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCES 462

Query: 367 GRLVEACGLFGQVLIR 382
            +L E   L  ++  R
Sbjct: 463 NKLEEVVNLLHKMFKR 478


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 197/380 (51%), Gaps = 8/380 (2%)

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           + +  + +V+  G+ PN+   N ++   C  G + NA  +FD +   G +P+VV+F+TLI
Sbjct: 209 HCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLI 268

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           + +C+   +E+ F L ++M    + PD+  YS LI+GL K  R++E N L     + GL 
Sbjct: 269 SGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLV 328

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            + V F++++D     G +  A++ ++ M + G  P++I+Y+ LI GLC+ G L EA  L
Sbjct: 329 PNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKL 388

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
             +++    +P  +T+++L+DG CK G +     + D M++ G++ D V  + LI+GL  
Sbjct: 389 LNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCR 448

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              + DA R     +     P+   +  ++D  C+        KL   M      P V+T
Sbjct: 449 DGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVT 508

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +  L+ G   QG + +A +L   ML   + P+ IT++ ++ G  K  + SV   +F    
Sbjct: 509 YNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS-SVDFKIFN--G 565

Query: 551 RNGVAPDIAIYNVLLNMLIK 570
             G+  D A Y  L+N  IK
Sbjct: 566 EKGLVSDYASYTALVNESIK 585



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 5/346 (1%)

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           ++ Y  +++    P++ +++IL+ G  K G +     +      RGL+  VV F++++  
Sbjct: 211 WEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISG 270

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y    +V         M +    P+V +YS LI GLC++ R+ EA GLF ++    L P+
Sbjct: 271 YCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPN 330

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFF 442
            +T+++LIDG CK GK+      ++ M  RG++PD +  + LINGL  D     A +   
Sbjct: 331 GVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLN 390

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           + +     P+   F TLMDGCC+       +++   M    I+ D +  T LI G+   G
Sbjct: 391 EMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDG 450

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A  +   ML  G  PD  TY+ +I    K  ++ +G  + K M+R+G  P +  YN
Sbjct: 451 RVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYN 510

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            L+N   K+  +  A  L   + +  + P+ IT+N ++ G+C   S
Sbjct: 511 ALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS 556



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 178/365 (48%), Gaps = 8/365 (2%)

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN--E 304
           +V+ F  LI A+     +E A Q   L+ + +    +     L+  + K  + + G+  E
Sbjct: 154 SVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQ-QPGHCWE 212

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
             L  LD G   +V +F+ +M  +  IGDV  A   +D +   G  P+V+S++ LI G C
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           +   + E   L   +   R+ P + TYS+LI+G CK  ++ +   L+D M + GL P+ V
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 425 VCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + LI+G         ALR F       + P+L  +N L++G CR     +  KL   M
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
                KPD IT T L+ G    G + SA+ +  +M++ G+  D + ++A+I GL +   +
Sbjct: 393 IGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRV 452

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
                M K M   G  PD   Y ++++   K+ ++    KL  ++   G  P ++TYN +
Sbjct: 453 RDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNAL 512

Query: 600 ICGYC 604
           + G+C
Sbjct: 513 MNGFC 517



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 149/309 (48%), Gaps = 33/309 (10%)

Query: 64  SPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIE 120
           SP++   + LI+ L +    + A+ +FD+M  + G   N            G  ++ LI+
Sbjct: 293 SPDVFTYSALINGLCKESRVEEANGLFDEMC-EMGLVPN------------GVTFTTLID 339

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
              + GKID ++  F  M D GI   PDL+    L++ L     + +  KL   M G GF
Sbjct: 340 GQCKHGKIDLALRNFEIMKDRGI--RPDLITYNALINGLCRDGDLKEARKLLNEMIGNGF 397

Query: 179 ----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 +  LM+G  + G +++A  +  ++++ G   + V    ++  LC +G++ +A  
Sbjct: 398 KPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAER 457

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +   +L  G KP+  T++ +I+ FCK+  ++   +L   M     VP ++ Y+ L++G  
Sbjct: 458 MLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFC 517

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD-RMLNG--GFLP 351
           K G++K    LL   L+  +  + + F+ ++D +   G       + D ++ NG  G + 
Sbjct: 518 KQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG------SSVDFKIFNGEKGLVS 571

Query: 352 NVISYSILI 360
           +  SY+ L+
Sbjct: 572 DYASYTALV 580


>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
 gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
          Length = 526

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 233/475 (49%), Gaps = 25/475 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL----VDSNSVGQYYKLC 170
           YS+LI++Y ++G + ++V+ +  M   GI  +  +V  L+ C     + S  +  + K  
Sbjct: 38  YSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFK 97

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +       +Y   M+   + G +  A  +  ++   G  P+ +    ++   C+ G++ 
Sbjct: 98  DSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQ 157

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA  +F+ +L    +P++VT++ L + FCK   + + F L + M +  L P+ + Y I I
Sbjct: 158 NAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAI 217

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G L E   L     ++G+    V++SS++  Y+  G    A   + R+   G L
Sbjct: 218 VGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNL 277

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +  S S LI  LC+ G +  A  +   +L   + P +++YS LI  +C++G +      
Sbjct: 278 VDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLW 337

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + +M++RGL  D +V ++L+NG      + +A + F Q   + + P++  +  L+DG  +
Sbjct: 338 FHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLK 397

Query: 466 --LKRATDTV----KLFMLMGMYN----------IKPDVITHTVLIRGIASQGSLSSAIL 509
             L++  + +    + F+L   +N          I+PDV  +TVLI G      L  A  
Sbjct: 398 ETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARE 457

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           LF +ML++GLTPD   Y+A+I+G      IS    + + M   G+ PD   ++VL
Sbjct: 458 LFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 512



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 195/445 (43%), Gaps = 58/445 (13%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++  LC   ++  A  L +     G  P+V  +S LI ++CK   L KA   Y  M+ 
Sbjct: 4   NMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVS 63

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             +  +  I S L+    K G   E     L   D GL LD V+++  MD Y   G++  
Sbjct: 64  HGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNE 123

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           AV+  + M  GG  P+ I Y+ LI G C +G +  A  +F ++L   +EP ++TY+ L  
Sbjct: 124 AVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILAS 183

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPD---------------------------------- 422
           GFCKSG + + F L D M   GL+P+                                  
Sbjct: 184 GFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDH 243

Query: 423 ------AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
                 ++VC  L++G    A   F +  R   + + F  + L++  CR+        + 
Sbjct: 244 IEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVC 303

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
            +M  +N+ PDVI+++ LI      G +  A L F  M++RGL+ DVI Y+ +++G  K 
Sbjct: 304 KIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKA 363

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL-----------------K 579
             +     +F  M   G+ PD+  Y VLL+  +KE  L                     K
Sbjct: 364 GRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKE-TLQQGWEGIAKERRSFLLRANHNK 422

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           L   + D  +EPD+  Y  +I G C
Sbjct: 423 LLSSMKDMQIEPDVPCYTVLIDGKC 447



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 160/329 (48%), Gaps = 33/329 (10%)

Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD- 159
           D + D G +     Y   I  + R G + E+  +F  + + GI    D ++ + S +V  
Sbjct: 199 DRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGI----DHIEVMYSSMVCG 254

Query: 160 ---SNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
              S      Y L   +  +G  V  F    L+N L R G ++ A ++ + +++   VP+
Sbjct: 255 YLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPD 314

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +++ +K++   C NG +  A   F  ++  G   +V+ ++ L+N +CK  +L++A QL+ 
Sbjct: 315 VISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFV 374

Query: 273 LMMEMDLVPDLIIYSILIDGLFKA-------GRLKE---------GNELLLTALDRGLKL 316
            M  + + PD+I Y++L+DG  K        G  KE          N+LL +  D  ++ 
Sbjct: 375 QMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEP 434

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           DV  ++ ++D       +  A + +D ML  G  P+  +Y+ LI G C QG + +A  L 
Sbjct: 435 DVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLL 494

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
            +++ + +EP  LT+S L     +S K++
Sbjct: 495 QEMIDKGIEPDELTFSVLNQSSLRSRKIQ 523


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 209/419 (49%), Gaps = 6/419 (1%)

Query: 192 GVIENAFHMHRQVIQRGF-VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
           G ++ A  M R++   G   PN  + N ++  L   G   +A  LFD +      PN +T
Sbjct: 166 GDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHIT 225

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           ++T+I+   K+  LE  F+L++ M+   L P++I Y++L+ GL +AGR+ E   +L    
Sbjct: 226 YNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMA 285

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
            R +  D   +S + D +   GD    +  ++  +  G      + SIL+ GLC+ G++ 
Sbjct: 286 SRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKIS 345

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           +A  +   ++   L  + + Y++LI+G+C+ G L   FS++  M  R ++PD +  + LI
Sbjct: 346 KAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALI 405

Query: 431 NGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
           NGL     + +A     +  +  + P++  FNTL+D   R  +      +   M    +K
Sbjct: 406 NGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLK 465

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P+V+++  ++      G +  A+ +   M  + + P    Y+AII    +  +      +
Sbjct: 466 PNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFML 525

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            + M+ +GV P I  YN+L+  L K+  +  A +L   L + GL PD+I+YNT+I   C
Sbjct: 526 AEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACC 584



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 241/500 (48%), Gaps = 12/500 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD------LVQRLMSCLVDSNSVGQYYK 168
           ++  ++  V  G +DE+V +   M   G   +P+      ++  L     D ++V  + +
Sbjct: 155 WNKAVQACVVAGDLDEAVGMLRRMGCDGA-PAPNAFSYNVVIAGLWKAGTDCDAVKLFDE 213

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +           Y  +++G ++KG +E+ F +  Q+++ G  PN++T N +L  LC  G+
Sbjct: 214 MPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGR 273

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +G  +++ D +      P+  T+S L +   +    +    L+   ++  +       SI
Sbjct: 274 MGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSI 333

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           L++GL K G++ +  E+L T ++ GL    V+++++++ Y  IGD+  A   + +M +  
Sbjct: 334 LLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRL 393

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+ I+Y+ LI GL +  R+ EA  L  ++    + PS+ T+++LID + ++G+L   F
Sbjct: 394 IRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCF 453

Query: 409 SLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +  +M ++GLKP+     ++V +   NG + +A+          ++P   ++N ++D  
Sbjct: 454 IILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAY 513

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
                      L   M    + P ++T+ +LI+G+  Q  +S A  L   +   GL PDV
Sbjct: 514 IECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDV 573

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           I+Y+ +I       N    L + K M + G+ P    Y +L + L     +     L+ Q
Sbjct: 574 ISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQ 633

Query: 584 LTDRGLEPDIITYNTIICGY 603
           + D+ + P    YN ++  Y
Sbjct: 634 MLDKDVVPCSGIYNIMVDAY 653



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 209/453 (46%), Gaps = 15/453 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKL--- 169
           Y+ +I+ +++ G ++    +++ M   G  L P+++    L+S L  +  +G+   +   
Sbjct: 226 YNTMIDGHIKKGDLESGFRLWSQMLRHG--LKPNVITYNVLLSGLCRAGRMGETAAVLDE 283

Query: 170 --CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
              R M   GF  Y  L +G  R G  +    +  + +++G      TC+ +L  LC +G
Sbjct: 284 MASRKMVPDGF-TYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDG 342

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +I  A  +   L+  G     V ++TLIN +C+   LE AF ++  M    + PD I Y+
Sbjct: 343 KISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYN 402

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LI+GL K  R+ E ++L++     G+   V  F++++DAY   G + +       M   
Sbjct: 403 ALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEK 462

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PNV+SY  ++   C+ G+++EA  +   + I+ + P    Y+++ID + + G     
Sbjct: 463 GLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQA 522

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           F L + M   G+ P  V  +LLI GL     + +A           L P++  +NTL+  
Sbjct: 523 FMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISA 582

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           CC        ++L   M    IKP   T+ +L   +   G +     L+ QML + + P 
Sbjct: 583 CCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPC 642

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
              Y+ ++    K    S    + K M   G+A
Sbjct: 643 SGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA 675



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 198/419 (47%), Gaps = 41/419 (9%)

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM-MEMDLVPDLII 285
           G+  +    F++L+    +P+  T++  + A      L++A  +   M  +    P+   
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+++I GL+KAG   +  +L     ++ +  + + +++++D ++  GD+    + + +ML
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  PNVI+Y++L+ GLC+ GR+ E   +  ++  R++ P   TYS L DG  ++G  +
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLI-----PNLFIFNTLM 460
              SL++  +K+G+K  A  CS+L+NGL  D      + V  TL+         I+NTL+
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS-------------------- 500
           +G C++        +F  M    I+PD IT+  LI G+                      
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430

Query: 501 ---------------QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
                           G L    ++   M ++GL P+V++Y +I++   K   I   + +
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAI 490

Query: 546 FKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              M    V P   +YN +++  I+  + D A  L  ++   G+ P I+TYN +I G C
Sbjct: 491 LDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLC 549



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 8/255 (3%)

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK-PDAVV 425
           GR  +  G F  ++  R  P   T++  +     +G L +   +   M   G   P+A  
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 426 CSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            +++I GL       DA++ F +     ++PN   +NT++DG  +        +L+  M 
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
            + +KP+VIT+ VL+ G+   G +     +  +M  R + PD  TYS +  G  +  +  
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             L +F+   + GV       ++LLN L K+  +  A ++   L + GL    + YNT+I
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370

Query: 601 CGYCSLNSCLIDGYF 615
            GYC +    ++G F
Sbjct: 371 NGYCQIGD--LEGAF 383


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 207/443 (46%), Gaps = 7/443 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+N     G +  A      +++ G  P+       +   C  G   +A  LF ++
Sbjct: 76  TYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM 135

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G      T++ L+   C    + +A  ++  M      PD  +YSI++ GL  AGR 
Sbjct: 136 PQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRA 195

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            E   LL  A+ +G   +V V+++++D Y   GD+  A+  +  M + G LPNV +Y+ L
Sbjct: 196 GEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQL 255

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+ G++  A  L+ +++   L P+++TY++LI G C  G L   F L  +M   GL
Sbjct: 256 ICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGL 315

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            P+   C +LI+ L     + +A +F    V+  +  N  I+ +++D  C+  +      
Sbjct: 316 APNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHN 375

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   +      PD   ++ LI G+  +  L  AI L   M++ G+  + + ++ +I    
Sbjct: 376 LMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHL 435

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +         +   M   GV PD+  Y V +    ++  ++ A  +  Q+ D G+ P++ 
Sbjct: 436 REFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLT 495

Query: 595 TYNTIICGYCSLNSCLIDGYFKS 617
           TYNT+I GY +L   L+   F S
Sbjct: 496 TYNTLIKGYANLG--LVSQAFSS 516



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 245/557 (43%), Gaps = 32/557 (5%)

Query: 84  SHVFDKMVIQFGKTYNFFRLFRDSL--GDFGC-----DYSFLIENYVRIGKIDESVEIFA 136
           SH +   V+ + +T  F    R  L     GC      Y+ L++     G + E++ +FA
Sbjct: 109 SHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFA 168

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKG 192
            M   G      +   ++  L  +   G+   L     GKGF     VY  L++G    G
Sbjct: 169 GMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTG 228

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            +E A  + + +  +G +PN+ T  +++   C +G++  A  L+  ++  G  PNVVT++
Sbjct: 229 DLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYT 288

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           TLI   C E  LE AF+L + M    L P+     +LID L K GR++E  + L + + +
Sbjct: 289 TLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQK 348

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G+K++ V+++S++DA    G    A     +++  GF+P+   YS LI GLC++ +L+EA
Sbjct: 349 GIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEA 408

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-- 430
             L   ++   ++ + + ++ LID   +  +      + D M   G+KPD V  ++ I  
Sbjct: 409 ISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRS 468

Query: 431 ---NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
              +G M DA     Q +   + PNL  +NTL+ G   L   +        M     KP+
Sbjct: 469 YCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPN 528

Query: 488 VITHTVLIRGIASQGSLSSAIL----------------LFFQMLKRGLTPDVITYSAIIH 531
             ++TVL+  +  + S    +                 L  +++K   +     Y   I 
Sbjct: 529 DESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIR 588

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            L K   +         M+   + P   +Y  ++    +   L  AL+    +  R   P
Sbjct: 589 CLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLP 648

Query: 592 DIITYNTIICGYCSLNS 608
            + +Y  IIC  C   S
Sbjct: 649 RLESYRFIICALCEEGS 665



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 131/550 (23%), Positives = 233/550 (42%), Gaps = 71/550 (12%)

Query: 84  SHVFDKMVIQF---GKTYNFFRLFRDSLGDFGCD----YSFLIENYVRIGKIDESVEIFA 136
           SHV+  MV      G+      L  D++G         Y+ LI+ Y   G ++ +++IF 
Sbjct: 179 SHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFK 238

Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YYKLCRAMRGKGFCVYEFLMNGLLRKG 192
            M   G   +     +L+     S  V +    Y ++  A        Y  L+ G   +G
Sbjct: 239 GMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEG 298

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            +E+AF +   +   G  PN  TC  ++  LC +G+I  A      L+  G K N V ++
Sbjct: 299 HLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYT 358

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
           ++I+A CK  K + A  L   ++    VPD  +YS LIDGL +  +L E   LL   ++ 
Sbjct: 359 SMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIES 418

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G++ + V F+ ++D ++            DRM   G  P+V++Y++ I+  CQ GR+ +A
Sbjct: 419 GVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDA 478

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS----LYDNMIKRGLKPDAVVCSL 428
             +  Q++   + P+L TY++LI G+   G +   FS    + DN  K   +   V+  L
Sbjct: 479 ESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGL 538

Query: 429 LI-----NGLMGDALRFF------------------------------------------ 441
           L+     + L+ D++  +                                          
Sbjct: 539 LLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEE 598

Query: 442 -------FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
                   QS  +T  P+  ++  +++ C R+K   + ++    M   N  P + ++  +
Sbjct: 599 AKSFLVGMQSANLT--PSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFI 656

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I  +  +GS  +A  +F  +L +    D I +  +I GL +  N +    +   ME    
Sbjct: 657 ICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNC 716

Query: 555 APDIAIYNVL 564
            P  AIY+ L
Sbjct: 717 RPGSAIYSRL 726



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 169/401 (42%), Gaps = 34/401 (8%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           VP I   N +L  L  +G + +  SL   +    P  N+ T++TLINA+C    L  A +
Sbjct: 40  VPPIRCLNTLLMALARHGMLSDMESLAARM----PVRNLHTYTTLINAYCHAGDLPAAKR 95

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
             + ++   L PD   Y+  + G  + G       L L    RG       +++++    
Sbjct: 96  HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLC 155

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
           G G V  A+  +  M   G  P+   YSI++ GLC  GR  EA  L    + +   P++ 
Sbjct: 156 GAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVA 215

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL 449
            Y++LIDG+C +G L     ++  M  +G                               
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKGC------------------------------ 245

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
           +PN+  +  L+ G C+  +    + L+  M    + P+V+T+T LI+G  S+G L  A  
Sbjct: 246 LPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFR 305

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           L   M   GL P+  T   +I  L K   I         + + G+  +  IY  +++ L 
Sbjct: 306 LLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALC 365

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
           K    D A  L  ++   G  PD   Y+++I G C  N  L
Sbjct: 366 KSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLL 406


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 197/378 (52%), Gaps = 5/378 (1%)

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A + F ++LL  P P +V FS L ++  +    E    L   +  + +  D+   SILI
Sbjct: 45  DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +      R+  G  +L   L  GL+  +V F+++++     G + + +  YD ML  G  
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQ 164

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PNV +Y+++I  L + G+  EA G   Q+      P+++ YS+LIDG+C  G++ +  S+
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSV 224

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +D M+ +G  P+    + L+NG      + +A++   +++R  L+P++  F T++ G CR
Sbjct: 225 FDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCR 284

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             R     +LF  +  +   P+++T+ VL+ G+   G+L  A  LF +M +  + P+++ 
Sbjct: 285 AGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVI 344

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ +I  L K   I  G  +F  +   G+ P++  Y  L+  L KE  +  A KLF ++ 
Sbjct: 345 YTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKME 404

Query: 586 DRGLEPDIITYNTIICGY 603
           + G  PD   YN II G+
Sbjct: 405 EDGCTPDKCAYNVIIQGF 422



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 207/406 (50%), Gaps = 5/406 (1%)

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           ++A    R ++ R  +P IV  +K+   +   G       L   +  +G + ++ + S L
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           IN FC   +++    + + ++++ L P ++ ++ L++GL   G++ +   L    L RGL
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
           + +V  ++ ++++    G    A+    +M   G +PNV++YS LI G C +G++ EA  
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
           +F  ++ +   P++ TY+SL++G+CK  ++ +   L D  +++GL PD V  + +I+GL 
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 435 G-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
                  A + F         PN+  +  L+DG C+     +   LF  M    +KP+++
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
            +T+LI  +   G +     LF +++  GL P+V TY+A++  L K   I     +F+ M
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
           E +G  PD   YNV++   ++  +   A +L  ++ +RG   D  T
Sbjct: 404 EEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 195/416 (46%), Gaps = 34/416 (8%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV----GQYYKL 169
           ++S L  + VR+G  +  V +   +  +GI      +  L++C    + V        K+
Sbjct: 64  EFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKI 123

Query: 170 CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
            +         +  L+NGL  +G ++    ++  ++ RG  PN+ T N I+  L  +G+ 
Sbjct: 124 LKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKA 183

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A      +  VG  PNVV +STLI+ +C   ++++A  +++LM+     P++  Y+ L
Sbjct: 184 NEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSL 243

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++G  K  R++E  +LL   L +GL  D+V F++++      G    A Q +  +   G 
Sbjct: 244 MNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGH 303

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            PN+++Y +L+ GLC+ G L EA  LF ++    ++P+L+ Y+ LID  CK GK++DG  
Sbjct: 304 TPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKE 363

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           L+  +I  GLK                              PN++ +  L+   C+    
Sbjct: 364 LFSRLIDEGLK------------------------------PNVYTYTALVGALCKEGLI 393

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
            +  KLF  M      PD   + V+I+G       S A  L  +M+ RG + D  T
Sbjct: 394 IEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 140/317 (44%), Gaps = 40/317 (12%)

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
           V   D   A+ ++  ML    LP ++ +S L   + + G       L  ++    +E  +
Sbjct: 38  VWFKDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDI 97

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--------------- 433
            + S LI+ FC   ++  G S+   ++K GL+P  V  + L+NGL               
Sbjct: 98  HSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDD 157

Query: 434 -------------------------MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
                                      +AL F  Q  ++  +PN+  ++TL+DG C   +
Sbjct: 158 MLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ 217

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   +F LM      P+V T+T L+ G      +  A+ L  + L++GL PD++T++ 
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           II GL +         +F+ +  +G  P+I  Y VLL+ L K  NL+ A  LF ++    
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST 337

Query: 589 LEPDIITYNTIICGYCS 605
           ++P+++ Y  +I   C 
Sbjct: 338 VKPNLVIYTILIDSLCK 354



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 24/300 (8%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N I+ +L K+     A+ F K        PN+   + LI         D A  VFD MV 
Sbjct: 171 NVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVS 230

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ- 151
           + G T N +             Y+ L+  Y +I +I+E+V++       G  L PD+V  
Sbjct: 231 K-GCTPNVYT------------YTSLMNGYCKIERIEEAVQLLDETLRKG--LVPDIVTF 275

Query: 152 -RLMSCLVDSN---SVGQYYK-LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             ++S L  +    +  Q ++ +C          Y  L++GL + G +E AF + +++ +
Sbjct: 276 TTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQR 335

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
               PN+V    ++  LC  G+I +   LF  L+  G KPNV T++ L+ A CKE  + +
Sbjct: 336 STVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIE 395

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           A +L+  M E    PD   Y+++I G  +        +L+   ++RG   D    + + D
Sbjct: 396 AHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 30/237 (12%)

Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI 430
           +A   F  +L+R+  P ++ +S L     + G       L   +   G++ D    S+LI
Sbjct: 45  DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           N                                C L R    + +   +    ++P ++T
Sbjct: 105 NCF------------------------------CHLHRVDFGLSVLSKILKLGLEPSIVT 134

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
            T L+ G+  +G +   ++L+  ML RGL P+V TY+ II+ L K    +  L   K ME
Sbjct: 135 FTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQME 194

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           + G  P++  Y+ L++       +D A  +F  +  +G  P++ TY +++ GYC + 
Sbjct: 195 KVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIE 251


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 197/425 (46%), Gaps = 30/425 (7%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++ GL R G   +A  +  +++  G VPN +T N ++      G +     L D +L
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 256

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             GPKPN+VT++ L++  C+  ++++   L + M    + PD   YSIL DGL + G  +
Sbjct: 257 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 316

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               L   +L +G+ L     S +++     G V +A Q  + +++ G +P  + Y+ LI
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 376

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G CQ   L  A  +F Q+  R + P  +TY++LI+G CK   +     L   M K G+ 
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 436

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
                                         P++  FNTL+D      +      +   M 
Sbjct: 437 ------------------------------PSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 466

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              IK DVI+   +++     G +  A+ +   M+ + + P+   Y++II    +  +  
Sbjct: 467 QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTE 526

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               + + M+ +GV+  I  YN+LL  L +   +D A +L   L ++GL PD+++YNTII
Sbjct: 527 QAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 586

Query: 601 CGYCS 605
              C+
Sbjct: 587 SACCN 591



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 223/480 (46%), Gaps = 21/480 (4%)

Query: 95  GKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           GK  +  ++F D + D G       Y+ +I+ +V+ G ++    +   M   G    P++
Sbjct: 208 GKGSDALKVF-DEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP--KPNI 264

Query: 150 VQR--LMSCLVDSNSVGQYYKL-----CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHR 202
           V    L+S L  +  + +   L       +M   GF  Y  L +GL R G       +  
Sbjct: 265 VTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGF-TYSILFDGLTRTGESRTMLSLFA 323

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           + +++G +    TC+ +L  LC +G++  A  + ++L+  G  P  V ++TLIN +C+  
Sbjct: 324 ESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVR 383

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L  AF ++  M    + PD I Y+ LI+GL K   + +  +L++     G+   V  F+
Sbjct: 384 DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 443

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++DAY   G + +       M   G   +VIS+  ++K  C+ G++ EA  +   ++ +
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK 503

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            + P+   Y+S+ID + +SG     F L + M   G+    V  +LL+ GL     + +A
Sbjct: 504 DVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA 563

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
               +      L P++  +NT++  CC        ++L   M  Y I+P + T+  L+  
Sbjct: 564 EELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSA 623

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +AS G +     L+ QML + + P    Y  ++    + +N S    + K M   G+A D
Sbjct: 624 LASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 202/437 (46%), Gaps = 42/437 (9%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           +P++ +CN +L+ L   G+  +  + F +L+  G +P+   ++ ++ A      L+ A  
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 270 LYNLM--MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
           +   M   E    PD   Y+++I GL+++G+  +  ++    +D G+  + + +++++D 
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           +V  GD+    +  D+ML+ G  PN+++Y++L+ GLC+ GR+ E   L  ++    + P 
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 388 LLTYSSLIDGF-----------------------------------CKSGKLRDGFSLYD 412
             TYS L DG                                    CK GK+     + +
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            ++  GL P  V+ + LING      +  A   F Q     + P+   +N L++G C+L+
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
             T    L M M    + P V T   LI    + G L     +   M ++G+  DVI++ 
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           +++    K   I   + +   M    VAP+  +YN +++  I+  + + A  L  ++ + 
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 538

Query: 588 GLEPDIITYNTIICGYC 604
           G+   I+TYN ++ G C
Sbjct: 539 GVSASIVTYNLLLKGLC 555



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 155/330 (46%), Gaps = 32/330 (9%)

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
           +P L   ++L++ L   GR  +        +  G + D   ++ V+ A V  GD+  A+ 
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 340 TYDRM--LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
              RM    G   P+  SY+++I GL + G+  +A  +F +++   + P+ +TY+++IDG
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
             K G L  GF L D M+  G KP                              N+  +N
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKP------------------------------NIVTYN 268

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            L+ G CR  R  +T  L   M  +++ PD  T+++L  G+   G   + + LF + LK+
Sbjct: 269 VLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKK 328

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
           G+     T S +++GL K   ++    + +++   G+ P   IYN L+N   +  +L  A
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             +F Q+  R + PD ITYN +I G C L 
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLE 418


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 230/468 (49%), Gaps = 9/468 (1%)

Query: 110 DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           +FG DY+  I   ++    D   + +      G+ L+P    R +S L  SN +    +L
Sbjct: 188 EFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEEL 247

Query: 170 CRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
              M   GF          ++ L ++  + +A  M  ++  +G +P++VT   ++  LC 
Sbjct: 248 LADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCN 307

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           N +   A  L++ ++ +G KP+VV    LI   CK +K+E+AF+L + M+ +++   + I
Sbjct: 308 NKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSI 367

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           Y+ LI G ++AG + +   ++      G +  VV ++ +++ Y  IG + +A     +M 
Sbjct: 368 YNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKME 427

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  P+  SY+ L+KGLC+  +L +A       +       +++ + LID FCK  K++
Sbjct: 428 TSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVK 487

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLM 460
               L+  M  +G++ DAV    LINGL        A   F Q ++  + PN+ ++N ++
Sbjct: 488 SALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIML 547

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
              C++       K+F+ M    I PD++T+  LI  +        A+ LF  M  +G+ 
Sbjct: 548 HHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVE 607

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           PD +T+  +I+GL      ++   +++ M  NG+  D  +   L+++L
Sbjct: 608 PDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLISVL 655



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 231/497 (46%), Gaps = 44/497 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYM-----SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
           Y  L+  YVR GK D  +  F  M      + GI  +  +   + +C  D   V +YY +
Sbjct: 158 YRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDL--VEKYYGM 215

Query: 170 CRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
             +   KG C+    Y   ++ L +   IE    +   + + GF P+I  CN  +  LC 
Sbjct: 216 ALS---KGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCK 272

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
             ++ +A  + + +   G  P+VVT++T++   C   +  +A  L+  M++M L PD++ 
Sbjct: 273 QNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVA 332

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
              LI GL K  +++E  EL    L   ++L V ++++++  +   G + +A      M 
Sbjct: 333 CGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMR 392

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             G  P V++Y+IL+   C  G + +A  L  ++    + P   +Y+ L+ G CK+ +L 
Sbjct: 393 TNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLD 452

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
             F+   + ++ G   D V C++LI                              D  C+
Sbjct: 453 KAFAFVSDHMEVGGFCDIVSCNILI------------------------------DAFCK 482

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           +K+    ++LF  M    ++ D +T+  LI G+ S G  + A  LF QMLK  + P+V  
Sbjct: 483 VKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNL 542

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y+ ++H L K  ++     +F  M +  + PDI  YN L+  L K      AL LF  + 
Sbjct: 543 YNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMR 602

Query: 586 DRGLEPDIITYNTIICG 602
            +G+EPD +T+  +I G
Sbjct: 603 TKGVEPDSLTFKYLING 619



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 117/531 (22%), Positives = 227/531 (42%), Gaps = 28/531 (5%)

Query: 88  DKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSP 147
           D      G+  + FR  R        D S +I   +      E VE    +  + I L P
Sbjct: 39  DATASSLGRLSDLFRPVR-------MDISRVILRALESSTCSEPVE----LERLDIELDP 87

Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
            +V  ++  L DS +  ++Y    +    GF   +F +  ++    ++  F +  + +  
Sbjct: 88  FVVNLVVRGLSDSETAVRFYWWAESR--PGFDHSQFAIAYIVSLLFVDGNFALLSEFL-- 143

Query: 208 GFVPNI-VTCNKILKRLCINGQI--GNASSL---FDVLLLVGPKPNVVTFSTLINAFCKE 261
           G V +  V  ++ L R+ ++G +  G   S+   FD +++ G +   + ++  I    K 
Sbjct: 144 GTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKN 203

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLKLDVVV 320
              +   + Y + +   L      YS  I  L ++ R+ E  E LL  +DR G   D+  
Sbjct: 204 CCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRI-ELVEELLADMDRFGFSPDIWA 262

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
            +  +D       +  A+Q  ++M   G +P+V++Y+ ++  LC   R  EA GL+ +++
Sbjct: 263 CNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMV 322

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----D 436
              L+P ++   +LI G CK+ K+ + F L   M+   ++    + + LI+G       D
Sbjct: 323 KMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSID 382

Query: 437 ALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
                   +R     P +  +N L++  C +        L   M    + PD  ++  L+
Sbjct: 383 KAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLL 442

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           +G+     L  A       ++ G   D+++ + +I    K K +   L +FK M+  G+ 
Sbjct: 443 KGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQ 502

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            D   Y  L+N L      + A +LF Q+    ++P++  YN ++   C +
Sbjct: 503 ADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKV 553


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 197/425 (46%), Gaps = 30/425 (7%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++ GL R G   +A  +  +++  G VPN +T N ++      G +     L D +L
Sbjct: 19  YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 78

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
             GPKPN+VT++ L++  C+  ++++   L + M    + PD   YSIL DGL + G  +
Sbjct: 79  HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 138

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
               L   +L +G+ L     S +++     G V +A Q  + +++ G +P  + Y+ LI
Sbjct: 139 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 198

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G CQ   L  A  +F Q+  R + P  +TY++LI+G CK   +     L   M K G+ 
Sbjct: 199 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 258

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
                                         P++  FNTL+D      +      +   M 
Sbjct: 259 ------------------------------PSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 288

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              IK DVI+   +++     G +  A+ +   M+ + + P+   Y++II    +  +  
Sbjct: 289 QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTE 348

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               + + M+ +GV+  I  YN+LL  L +   +D A +L   L ++GL PD+++YNTII
Sbjct: 349 QAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 408

Query: 601 CGYCS 605
              C+
Sbjct: 409 SACCN 413



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 222/480 (46%), Gaps = 21/480 (4%)

Query: 95  GKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
           GK  +  ++F D + D G       Y+ +I+ +V+ G ++    +   M   G    P++
Sbjct: 30  GKGSDALKVF-DEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP--KPNI 86

Query: 150 VQR--LMSCL-----VDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHR 202
           V    L+S L     +D   V        +M   GF  Y  L +GL R G       +  
Sbjct: 87  VTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGF-TYSILFDGLTRTGESRTMLSLFA 145

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           + +++G +    TC+ +L  LC +G++  A  + ++L+  G  P  V ++TLIN +C+  
Sbjct: 146 ESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVR 205

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
            L  AF ++  M    + PD I Y+ LI+GL K   + +  +L++     G+   V  F+
Sbjct: 206 DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 265

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++DAY   G + +       M   G   +VIS+  ++K  C+ G++ EA  +   ++ +
Sbjct: 266 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK 325

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
            + P+   Y+S+ID + +SG     F L + M   G+    V  +LL+ GL     + +A
Sbjct: 326 DVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA 385

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
               +      L P++  +NT++  CC        ++L   M  Y I+P + T+  L+  
Sbjct: 386 EELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSA 445

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +AS G +     L+ QML + + P    Y  ++    + +N S    + K M   G+A D
Sbjct: 446 LASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 172/367 (46%), Gaps = 5/367 (1%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
            P P+  +++ +I    +  K   A ++++ M++M +VP+ I Y+ +IDG  K G L+ G
Sbjct: 11  APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAG 70

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             L    L  G K ++V ++ ++      G +       D M +    P+  +YSIL  G
Sbjct: 71  FRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDG 130

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           L + G       LF + L + +     T S L++G CK GK+     + + ++  GL P 
Sbjct: 131 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 190

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V+ + LING      +  A   F Q     + P+   +N L++G C+L+  T    L M
Sbjct: 191 TVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVM 250

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    + P V T   LI    + G L     +   M ++G+  DVI++ +++    K  
Sbjct: 251 EMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNG 310

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I   + +   M    VAP+  +YN +++  I+  + + A  L  ++ + G+   I+TYN
Sbjct: 311 KIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYN 370

Query: 598 TIICGYC 604
            ++ G C
Sbjct: 371 LLLKGLC 377



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 30/262 (11%)

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
            G   P+  SY+++I GL + G+  +A  +F +++   + P+ +TY+++IDG  K G L 
Sbjct: 9   EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 68

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
            GF L D M+  G KP                              N+  +N L+ G CR
Sbjct: 69  AGFRLRDQMLHDGPKP------------------------------NIVTYNVLLSGLCR 98

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             R  +T  L   M  +++ PD  T+++L  G+   G   + + LF + LK+G+     T
Sbjct: 99  AGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYT 158

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
            S +++GL K   ++    + +++   G+ P   IYN L+N   +  +L  A  +F Q+ 
Sbjct: 159 CSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMK 218

Query: 586 DRGLEPDIITYNTIICGYCSLN 607
            R + PD ITYN +I G C L 
Sbjct: 219 SRHIRPDHITYNALINGLCKLE 240


>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Glycine max]
          Length = 632

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 209/394 (53%), Gaps = 6/394 (1%)

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           K++  L  +G+   A  +F  L+  G +P++ T++TL+NA   +   +    + +L+ E 
Sbjct: 77  KVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEK 136

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + PD I ++ LI+   ++G +++  +++    + GLK     +++++  Y   G    +
Sbjct: 137 QMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDES 196

Query: 338 VQTYDRM-LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           ++  D M   G   PN+ +Y++LI+ LC+   + EA  +  ++    ++P ++T++++  
Sbjct: 197 MKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIAT 256

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
            + ++GK     ++   M +  LKP+   C+++I+G      + +ALRF ++   + + P
Sbjct: 257 AYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQP 316

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
           NL + N+L++G   +       ++  LM  + I+PDVIT++ ++   +  G L     ++
Sbjct: 317 NLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIY 376

Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
             MLK G+ PD   YS +  G  + + +     M  +M ++GV P++ I+  +++     
Sbjct: 377 NNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSV 436

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
             +D A+++F ++ + G+ P++ T+ T+I GY  
Sbjct: 437 GRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAE 470



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 189/395 (47%), Gaps = 24/395 (6%)

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYK-------LCRAMRG 175
           ++ GK  E++ IF  + + G    P L     + L+++ +  +Y+K       L    + 
Sbjct: 83  IKSGKPQEAIVIFQNLIEGG--HQPSLA--TYTTLLNALTTQKYFKPIHSIVSLVEEKQM 138

Query: 176 KGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           K   ++   L+N     G +E+A  + +++ + G  P+  T N ++K   I G+   +  
Sbjct: 139 KPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMK 198

Query: 235 LFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           L D++   G  KPN+ T++ LI A CK   + +A+ +   M    + PD++ ++ +    
Sbjct: 199 LLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAY 258

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G+  +   ++L      LK +    + ++  Y   G V  A++   RM + G  PN+
Sbjct: 259 AQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNL 318

Query: 354 ISYSILIKG---LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           I  + L+ G   +  +  + E   L  +  IR   P ++TYS++++ + ++G L     +
Sbjct: 319 IVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIR---PDVITYSTIMNAWSQAGFLEKCKEI 375

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           Y+NM+K G+KPDA   S+L  G      M  A        +  + PN+ IF T++ G C 
Sbjct: 376 YNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCS 435

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
           + R  + +++F  MG + + P++ T   LI G A 
Sbjct: 436 VGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAE 470



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 167/358 (46%), Gaps = 12/358 (3%)

Query: 145 LSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAF 198
           + PD +    L++   +S ++    K+ + M+  G     C Y  L+ G    G  + + 
Sbjct: 138 MKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESM 197

Query: 199 HMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
            +   +   G V PN+ T N +++ LC    I  A ++   +   G +P+VVTF+T+  A
Sbjct: 198 KLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATA 257

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           + +  K  +A  +   M    L P+    +I+I G  + G+++E    +    D G++ +
Sbjct: 258 YAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPN 317

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           ++V +S+++ +V + D     +    M      P+VI+YS ++    Q G L +   ++ 
Sbjct: 318 LIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYN 377

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL---- 433
            +L   ++P    YS L  G+ ++ ++     +   M K G+ P+ V+ + +I+G     
Sbjct: 378 NMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVG 437

Query: 434 -MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
            M +A+R F +     + PNL  F TL+ G    K+      +  +M  ++++P   T
Sbjct: 438 RMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKST 495



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 181/407 (44%), Gaps = 23/407 (5%)

Query: 16  NKCYCSESKTHISDL-----QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQL 70
           N C    S+T + ++     +  +A  I  NLI+  +  P++  +    N +++    + 
Sbjct: 67  NDCQIVRSRTKVMNILIKSGKPQEAIVIFQNLIEGGH-QPSLATYTTLLNALTTQKYFKP 125

Query: 71  IHV---LLQSDMRDVASHVFDKMVIQFGKTYNFF-------RLFRDSLGDFGCDYSFLIE 120
           IH    L++       S  F+ ++  F ++ N         ++    L    C Y+ LI+
Sbjct: 126 IHSIVSLVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIK 185

Query: 121 NYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
            Y   GK DES+++   MS  G  + P+L     L+  L    ++ + + +   M   G 
Sbjct: 186 GYGIAGKPDESMKLLDLMSTEG-NVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGM 244

Query: 179 ----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 +  +     + G    A  M  ++ +    PN  TC  I+   C  G++  A  
Sbjct: 245 QPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALR 304

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
               +  +G +PN++  ++L+N F      +   ++  LM E  + PD+I YS +++   
Sbjct: 305 FVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWS 364

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           +AG L++  E+    L  G+K D   +S +   YV   ++ +A +    M   G  PNV+
Sbjct: 365 QAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVV 424

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
            ++ +I G C  GR+  A  +F ++    + P+L T+ +LI G+ ++
Sbjct: 425 IFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEA 471



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 136/288 (47%), Gaps = 6/288 (2%)

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           + VM+  +  G    A+  +  ++ GG  P++ +Y+ L+  L  Q        +   V  
Sbjct: 76  TKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEE 135

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN--GLMG---D 436
           ++++P  + +++LI+ F +SG + D   +   M + GLKP A   + LI   G+ G   +
Sbjct: 136 KQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDE 195

Query: 437 ALRFF-FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           +++     S    + PNL  +N L+   C+++  ++   +   M    ++PDV+T   + 
Sbjct: 196 SMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIA 255

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
              A  G  + A  +  +M +  L P+  T + II G  +   +   L     M+  G+ 
Sbjct: 256 TAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQ 315

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           P++ + N L+N  +   + D   ++   + +  + PD+ITY+TI+  +
Sbjct: 316 PNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAW 363



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%)

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           V + T ++  +   G    AI++F  +++ G  P + TY+ +++ L   K       +  
Sbjct: 72  VRSRTKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVS 131

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
           L+E   + PD   +N L+N   +  N++ A K+  ++ + GL+P   TYNT+I GY
Sbjct: 132 LVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGY 187



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 95/261 (36%), Gaps = 47/261 (18%)

Query: 93  QFGKTYN----FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
           Q GKT         + R+SL       + +I  Y R GK+ E++     M D+G  + P+
Sbjct: 260 QNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLG--MQPN 317

Query: 149 L---------------------VQRLMSCLVDSNSVGQYYKLCRAMRGKGFC-------- 179
           L                     V +LM        V  Y  +  A    GF         
Sbjct: 318 LIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYN 377

Query: 180 ------------VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
                        Y  L  G +R   +E A  M   + + G  PN+V    ++   C  G
Sbjct: 378 NMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVG 437

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           ++ NA  +FD +   G  PN+ TF TLI  + +  +  KA  +  +M E  + P      
Sbjct: 438 RMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTIL 497

Query: 288 ILIDGLFKAGRLKEGNELLLT 308
           ++ +    AG  +    LL T
Sbjct: 498 LVAEAWRFAGFKERAKTLLRT 518



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 61/125 (48%), Gaps = 1/125 (0%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           +P + T+T L+  + +Q        +   + ++ + PD I ++A+I+   +  N+     
Sbjct: 104 QPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFFNALINAFAESGNMEDAKK 163

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG-LEPDIITYNTIICGY 603
           + + M+ +G+ P    YN L+         D ++KL   ++  G ++P++ TYN +I   
Sbjct: 164 VVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRAL 223

Query: 604 CSLNS 608
           C + +
Sbjct: 224 CKMEN 228


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/594 (24%), Positives = 271/594 (45%), Gaps = 40/594 (6%)

Query: 28  SDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVF 87
           + L  +QA  I+A+L        A+ FF W    ++S        + +      +++  F
Sbjct: 72  NSLTHDQAVTIVASLASDAGSMVALSFFNWA---IASSKFRHFTRLYIACAASLISNKNF 128

Query: 88  DK-------MVIQFGKTYN-------FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVE 133
           +K       MV  F +             +    L       +++++    +G ++ +  
Sbjct: 129 EKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAEN 188

Query: 134 IFAYMSDMGIYLSPDLVQ-RLMSCLVDSNSVGQYYKLCRAMRG---KGFCVYEFLMNGLL 189
           +F  M   G+   P+ V  R+M  +V    +G   +  R + G   +GF V    ++ ++
Sbjct: 189 LFDEMCARGV--QPNCVSYRVM--VVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIV 244

Query: 190 R----KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
           R    KG +  A    R+  + G  PN++    +++ LC  G +  A  + + ++  G K
Sbjct: 245 REFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWK 304

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLY-NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           PNV T + LI+  CK+   EKAF+L+  L+   +  P+++ Y+ +I G  +  ++     
Sbjct: 305 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEM 364

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           LL    ++GL  +   +++++D +   G+  RA +  + M   GF PNV +Y+ ++ GLC
Sbjct: 365 LLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLC 424

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           ++GR+ EA  +        L+   +TY+ LI   CK  +++    L++ M+K G++PD  
Sbjct: 425 KKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIH 484

Query: 425 VCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + LI        M ++  FF ++VR  L+P    + +++ G CR       +K F  M
Sbjct: 485 SYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRM 544

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
             +    D IT+  LI G+  Q  L  A  L+  M+++GLTP  +T   + +   K   I
Sbjct: 545 SDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCK---I 601

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
             G     ++ER      +   N L+  L  E  +  A   F +L D+  +P++
Sbjct: 602 DDGCSAMVVLERLEKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDK--DPNV 653



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 210/434 (48%), Gaps = 15/434 (3%)

Query: 191 KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
           K  IE    MH Q    G  P+  T N ++K +   G +  A +LFD +   G +PN V+
Sbjct: 149 KEAIEMVIEMHNQ----GLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVS 204

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           +  ++  +CK   + ++ +    M+E   V D    S+++    + G +           
Sbjct: 205 YRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFC 264

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
           + GL+ +++ F+ +++     G V +A +  + M+  G+ PNV +++ LI GLC++G   
Sbjct: 265 EMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTE 324

Query: 371 EACGLFGQ-VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
           +A  LF + V     +P++LTY+++I G+C+  K+     L   M ++GL P+    + L
Sbjct: 325 KAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTL 384

Query: 430 INGL--MGDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I+G    G+  R +     M      PN+  +N ++DG C+  R  +  K+        +
Sbjct: 385 IDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGL 444

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
             D +T+T+LI     Q  +  A++LF +M+K G+ PD+ +Y+ +I    + K +     
Sbjct: 445 DADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEM 504

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            F+   R G+ P    Y  ++    +E NL  ALK F +++D G   D ITY  +I G C
Sbjct: 505 FFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLC 564

Query: 605 SLNS-----CLIDG 613
             +      CL D 
Sbjct: 565 KQSKLDEARCLYDA 578



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/569 (23%), Positives = 262/569 (46%), Gaps = 52/569 (9%)

Query: 12  WRSINKCYCSESKTHISDLQFNQANAILANLIKT----NNPTPAIQFFKWTHNCVSSPNI 67
           +R   + Y + + + IS+  F +A+ ++  ++K+         AI+     HN   +P+ 
Sbjct: 108 FRHFTRLYIACAASLISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPST 167

Query: 68  AQL---IHVLLQSDMRDVASHVFDKM---------------VIQFGKTYNFFRLFRDSLG 109
             L   + ++ +  + + A ++FD+M               V+ + K  N     R  LG
Sbjct: 168 KTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDR-WLG 226

Query: 110 DF--------GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS- 160
                         S ++  +   G +  ++  F    +MG  L P+L+    +C+++  
Sbjct: 227 GMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMG--LRPNLIN--FTCMIEGL 282

Query: 161 ---NSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQ-RGFVPN 212
               SV Q +++   M G+G+      +  L++GL +KG  E AF +  ++++     PN
Sbjct: 283 CKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPN 342

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           ++T   ++   C + ++  A  L   +   G  PN  T++TLI+  CK    E+A++L N
Sbjct: 343 VLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMN 402

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
           +M E    P++  Y+ ++DGL K GR++E  ++L +    GL  D V ++ ++  +    
Sbjct: 403 VMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQA 462

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           ++ +A+  +++M+  G  P++ SY+ LI   C++ R+ E+   F + +   L P+  TY+
Sbjct: 463 EIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYT 522

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQS-VRM 447
           S+I G+C+ G LR     +  M   G   D++    LI+GL      D  R  + + +  
Sbjct: 523 SMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEK 582

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            L P      TL    C++    D     +++     K  V T   L+R + S+  +  A
Sbjct: 583 GLTPCEVTRVTLAYEYCKID---DGCSAMVVLERLEKKLWVRTVNTLVRKLCSERKVGMA 639

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
            L F ++L +    + +T +A +   ++ 
Sbjct: 640 ALFFHKLLDKDPNVNRVTIAAFMTACYES 668



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 175/357 (49%), Gaps = 6/357 (1%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           ++ +F +  ++++A ++   M    L P     + ++  + + G ++    L      RG
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           ++ + V +  ++  Y  +G+V  + +    M+  GF+ +  + S++++  C++G +  A 
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
             F +     L P+L+ ++ +I+G CK G ++  F + + M+ RG KP+    + LI+GL
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 434 -----MGDALRFFFQSVRM-TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
                   A R F + VR     PN+  +  ++ G CR ++      L   M    + P+
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
             T+T LI G    G+   A  L   M + G +P+V TY+AI+ GL K   +     + K
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
              RNG+  D   Y +L++   K+  +  AL LF ++   G++PDI +Y T+I  +C
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFC 494



 Score = 42.4 bits (98), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 18/72 (25%), Positives = 38/72 (52%)

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   + M   M   G+AP     N ++ ++ +   ++ A  LF ++  RG++P+ ++Y  
Sbjct: 148 VKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRV 207

Query: 599 IICGYCSLNSCL 610
           ++ GYC L + L
Sbjct: 208 MVVGYCKLGNVL 219


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 230/490 (46%), Gaps = 42/490 (8%)

Query: 122 YVRIGKIDESVEIF-AYMSDMGIY--LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF 178
           + R G  D +++ F   + D+G     +P L   L+  L+  N VG    +C  MR  G 
Sbjct: 106 FARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGV 165

Query: 179 C----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+  L +   +  A  M  ++  +G  P+ VT   I+  LC  G++  A+ 
Sbjct: 166 QPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATE 225

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +     L    P   +++ +I A C+E ++++ F +   M+   L P++I Y+ +++   
Sbjct: 226 V-----LSAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFC 280

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           KAG L+    +L   +  G   +V  F++++      G V  A+  +  M+  G+ P+ +
Sbjct: 281 KAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTV 340

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           SY++LI+GLC  G L  A  +   +      P+  TYS+LIDGF K+G L    S++++M
Sbjct: 341 SYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDM 400

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            + G KP+ VV + ++ G+    L F   +   +LI  + + N                 
Sbjct: 401 TRSGCKPNVVVYTNMV-GVFCKKLMF---NQAESLIDKMLVEN----------------- 439

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
                      P+ +T   LIR + +   +  A+ +F +M + G  P+  TY+ ++HGLF
Sbjct: 440 ---------CPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLF 490

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +  N    L M   M+ +G+   +  YN +++ L +      A+   G++  RG++PD  
Sbjct: 491 REGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAF 550

Query: 595 TYNTIICGYC 604
           T+  II  YC
Sbjct: 551 TFTAIIHAYC 560



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 182/375 (48%), Gaps = 22/375 (5%)

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G +PNV T++ L+ A C+  ++  A ++ + M      PD + Y  ++  L   GR+ E 
Sbjct: 164 GVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEA 223

Query: 303 NELLLTALDRGLKLDVVVFS-----SVMDAYVGIGD-VGRAVQTYDRMLNGGFLPNVISY 356
            E+L  A       + V+ +      + + +  +GD VGR +Q           PNVI+Y
Sbjct: 224 TEVLSAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQ-----------PNVITY 272

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           + ++   C+ G L  AC +  +++I    P++ T+++L+ G    G++ D   ++  M+ 
Sbjct: 273 TTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVA 332

Query: 417 RGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G  P  V  ++LI GL  +GD   A        +    PN   ++TL+DG  +      
Sbjct: 333 EGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDG 392

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            + ++  M     KP+V+ +T ++     +   + A  L  +ML     P+ +T++ +I 
Sbjct: 393 AISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIR 452

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            L   + +   L +F  M R+G  P+   YN LL+ L +E N   AL++  ++ + G+E 
Sbjct: 453 SLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIEL 512

Query: 592 DIITYNTIICGYCSL 606
            ++TYNT++ G C +
Sbjct: 513 SLVTYNTVVSGLCQM 527



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/400 (22%), Positives = 185/400 (46%), Gaps = 7/400 (1%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  ++  L R+  ++  F +   ++ RG  PN++T   I+   C  G++  A ++   ++
Sbjct: 237 YNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMV 296

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           + G  PNV TF+ L+     + ++  A  ++  M+     P  + Y++LI GL   G LK
Sbjct: 297 ITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLK 356

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
             + +L      G   +   +S+++D +   GD+  A+  ++ M   G  PNV+ Y+ ++
Sbjct: 357 GASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMV 416

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
              C++    +A  L  ++L+    P+ +T+++LI   C   ++     ++  M + G  
Sbjct: 417 GVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCP 476

Query: 421 PDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+    + L++GL      GDAL+   +     +  +L  +NT++ G C+++   + +  
Sbjct: 477 PNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFF 536

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              M +  I+PD  T T +I     +G +  A  +   M       +++ Y+ ++  L  
Sbjct: 537 VGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCN 596

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE--CN 573
              +   +     M   G+ P+   +NVL+  + +   CN
Sbjct: 597 QDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCN 636



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/412 (22%), Positives = 189/412 (45%), Gaps = 41/412 (9%)

Query: 133 EIFAYMSDM-GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK--------GFCVYEF 183
           E+FA + DM G  L P+++    + +V++       ++  A+  +            +  
Sbjct: 252 EVFAVVGDMVGRGLQPNVIT--YTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTA 309

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+ GL   G + +A  M + ++  G+ P+ V+ N +++ LC  G +  ASS+ + +   G
Sbjct: 310 LVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHG 369

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN  T+STLI+ F K   L+ A  ++N M      P++++Y+ ++    K     +  
Sbjct: 370 CFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAE 429

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L+   L      + V F++++ +      VGRA+  +  M   G  PN  +Y+ L+ GL
Sbjct: 430 SLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGL 489

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
            ++G   +A  +  ++    +E SL+TY++++ G C+    R+       MI RG++PDA
Sbjct: 490 FREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDA 549

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
                                         F F  ++   C+         +   M + N
Sbjct: 550 ------------------------------FTFTAIIHAYCKEGEVRMAAWILGAMNVVN 579

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
              +++ +T+L+  + +Q  L  A++   +ML  G+ P+ +T++ ++ G+F+
Sbjct: 580 CGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFR 631



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 499 ASQGSLSSAILLFFQMLK-----RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           A  G+   A+  F++ +      R   P +  Y+ +I  L +   +     +   M ++G
Sbjct: 107 ARAGAPDRALKTFYRAVHDLGCARPTAPRL--YNHLIDALLRENMVGAVALVCGNMRKDG 164

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           V P++  YN+L+  L +   + AA K+  ++  +G  PD +TY TI+   C+L
Sbjct: 165 VQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTL 217


>gi|222641578|gb|EEE69710.1| hypothetical protein OsJ_29377 [Oryza sativa Japonica Group]
          Length = 577

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 209/407 (51%), Gaps = 7/407 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           +P +  CN IL  L     +     LFD +L  G  P+VVT++TLINA   +  + KA++
Sbjct: 135 LPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWE 194

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           +++ M+   + P+++ Y+ +I  L +   + +   L L   + G++ ++  ++++M ++ 
Sbjct: 195 VWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHF 254

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
              ++  A+  Y  +L  G +PN + ++ LI GLCQ  R+ EA  +F  +    + P++ 
Sbjct: 255 KRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVP 314

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL 449
            Y+SLI G  +SG  ++  + +  +I++GL+PD   CS+++ GL  DAL    +   + +
Sbjct: 315 VYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLC-DALVTCTRMSEVGV 373

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            P++  +++L+DG  +       + ++  M    ++P+V+T+T LI G A  G + +A  
Sbjct: 374 EPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFW 433

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF------KLMERNGVAPDIAIYNV 563
           L  +M ++G+  + IT S ++ GL +   +   +         K  E+N    +   Y  
Sbjct: 434 LQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMT 493

Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
           L+  L  +   + A   F  + D G+ PD  TY  +I G C L   L
Sbjct: 494 LIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVL 540



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 213/443 (48%), Gaps = 24/443 (5%)

Query: 129 DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFL 184
           DE++ +F  + ++    +      ++  LV ++ + + ++L   M G+G       Y  L
Sbjct: 123 DEALSVFGRLRELPALPA---CNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTL 179

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
           +N    +G +  A+ +  Q++ R   PN+VT   ++  LC    IG+A  LF  +   G 
Sbjct: 180 INACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGM 239

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +PN+ T++ L+++  K   ++ A   Y  +++  LVP+ +I++ LIDGL +A R+ E   
Sbjct: 240 RPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKN 299

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           + L      +   V V++S++      G    A+  +  ++  G  P+  + SI+++GLC
Sbjct: 300 IFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLC 359

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
                +  C    +V +   EP ++TYSSLIDG  K+G++    ++Y  M+ +G++P+ V
Sbjct: 360 DA---LVTCTRMSEVGV---EPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVV 413

Query: 425 VCSLLINGLM--GDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
             + LI+G    GD    F+    M    +  N    + L+DG CR  R  D V+  M  
Sbjct: 414 TYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEY 473

Query: 480 G---MYNIKPDV---ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
                    P +   +T+  LI G+   G  + A   F  M   G+ PD  TY+ +I GL
Sbjct: 474 SGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGL 533

Query: 534 FKGKNISVGLHMFKLMERNGVAP 556
                +   + ++  M + GV P
Sbjct: 534 CMLGYVLNAMMLYADMVKVGVKP 556



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 113/244 (46%), Gaps = 37/244 (15%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC--------------- 224
           VY  L++G  R G  + A    +++I++G  P+  TC+ +++ LC               
Sbjct: 315 VYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDALVTCTRMSEVGVE 374

Query: 225 --------------INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
                          NG++  A +++  ++  G +PNVVT++ LI+   K   ++ AF L
Sbjct: 375 PHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWL 434

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL-------TALDRGLKLDVVVFSS 323
              M E  +  + I  S+L+DGL +  R+++    ++       +  +  +   V   + 
Sbjct: 435 QKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTL 494

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           +   Y+  G    A   +  M + G +P+  +Y+++I+GLC  G ++ A  L+  ++   
Sbjct: 495 IYGLYID-GQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVG 553

Query: 384 LEPS 387
           ++P+
Sbjct: 554 VKPT 557



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%)

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           R+  +P L   N ++DG  +        +LF  M    + P V+T+  LI     QG ++
Sbjct: 131 RLRELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVA 190

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A  ++ QM+ R + P+V+TY+ +I  L +   I     +F  M+  G+ P++  YN L+
Sbjct: 191 KAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALM 250

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           +   K  N+  AL  +  L   GL P+ + + T+I G C  N
Sbjct: 251 SSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQAN 292


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 203/409 (49%), Gaps = 38/409 (9%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
           R+G +D++VE+F  MSD              +C+ D                 G+  Y  
Sbjct: 12  RVGNVDQAVEVFRGMSDR-------------NCVAD-----------------GY-TYST 40

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LM+GL  +G I+ A  +  ++   G  PN V  N ++  LC  G +  AS L D + L G
Sbjct: 41  LMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKG 100

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN VT+++L++  C + KL+KA  L N M+    VP+ I +  L+DG  K GR  +G 
Sbjct: 101 CVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGV 160

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +L++  ++G + +   +SS++      G     +Q +  M+  G  PN I YS LI GL
Sbjct: 161 RVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGL 220

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           C++G+  EA     ++  +   P+  TYSSL+ G+ ++G +     ++  M         
Sbjct: 221 CREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHE 280

Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           V  S+LINGL     + +AL  + Q +   +  ++  +++++ G C  +     +KLF  
Sbjct: 281 VCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQ 340

Query: 479 MGMYNIK--PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           M  +N K  PDV+T+ +L+    ++ S+S AI +   ML +G  PD IT
Sbjct: 341 MLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 389



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 190/384 (49%), Gaps = 7/384 (1%)

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           I+  LC  G +  A  +F  +       +  T+STL++  C E ++++A  L + M    
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
             P+ + +++LI  L K G L   ++L+     +G   + V ++S++      G + +A+
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
              +RM+    +PN I++  L+ G  + GR ++   +   +  +    +  +YSSLI G 
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNL 453
            K GK   G  L+  M+++G KP+ +V S LI+GL       +A  +  +       PN 
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
           F +++LM G          + ++  M   +     + +++LI G+   G L  A++++ Q
Sbjct: 246 FTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQ 305

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM--ERNGVAPDIAIYNVLLNMLIKE 571
           ML RG+  DV+ YS++IHG    + +  G+ +F  M      + PD+  YN+LLN    +
Sbjct: 306 MLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTK 365

Query: 572 CNLDAALKLFGQLTDRGLEPDIIT 595
            ++  A+ +   + D+G +PD IT
Sbjct: 366 NSVSRAIDILNTMLDQGCDPDFIT 389



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 213/440 (48%), Gaps = 22/440 (5%)

Query: 105 RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVG 164
           R+ + D G  YS L+      G+IDE+V +   M   G + +P     L+S L     + 
Sbjct: 29  RNCVAD-GYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLS 87

Query: 165 QYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
           +  KL   M  KG CV     Y  L++GL  KG ++ A  +  +++    VPN +T   +
Sbjct: 88  RASKLVDNMFLKG-CVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTL 146

Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
           +     +G+  +   +   L   G + N  ++S+LI+   KE K E   QL+  M+E   
Sbjct: 147 VDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGC 206

Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
            P+ I+YS LIDGL + G+  E  E L+   ++G   +   +SS+M  Y   GD+ +A+ 
Sbjct: 207 KPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAIL 266

Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
            +  M +     + + YSILI GLC+ G+L EA  ++ Q+L R ++  ++ YSS+I GFC
Sbjct: 267 VWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFC 326

Query: 400 KSGKLRDGFSLYDNMI--KRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
            +  +  G  L++ M+     L+PD V  ++L+N              + ++   + I N
Sbjct: 327 NAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAF----------CTKNSVSRAIDILN 376

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPD--VITHTVLIRGIASQGSLSSAILLFFQML 515
           T++D  C     T  + L  L    +   D       +++R I  Q ++ ++ ++   ML
Sbjct: 377 TMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEV-ML 435

Query: 516 KRGLTPDVITYSAIIHGLFK 535
           ++ L P   T++  +  L K
Sbjct: 436 QKFLLPKPSTWALAVQQLCK 455



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 59/297 (19%)

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           +  RG  F  Y  L++GL ++G  E+   + ++++++G  PN +  + ++  LC  G+  
Sbjct: 169 KGYRGNEF-SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPD 227

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A      +   G  PN  T+S+L+  + +   + KA  ++  M + D     + YSILI
Sbjct: 228 EAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILI 287

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML--NGG 348
           +GL K G+LKE   +    L RG+KLDVV +SS++  +     V + ++ +++ML  N  
Sbjct: 288 NGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPK 347

Query: 349 FLPNVISYSILIKGLCQQGRLVEA------------------CGLFGQVL---------- 380
             P+V++Y+IL+   C +  +  A                  C +F + L          
Sbjct: 348 LQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDG 407

Query: 381 -----------IRR-----------------LEPSLLTYSSLIDGFCKSGKLRDGFS 409
                      I+R                 L P   T++  +   CK  K+R   S
Sbjct: 408 REFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKTIS 464


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 204/426 (47%), Gaps = 9/426 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y+F++  L + G++  A  +   +     VP++VT N ++   C  G+ G A  LF  +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 240 LLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
                 +P+  T++TLI+  C     E A +L + M + ++  ++  YS +I  L K  +
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
            +E  ++L   +  G   DV  F+ VM  +    ++ +A + Y  M+  G+ P+ +SY I
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLE--PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           LI GL + G+L E+  +  ++ +R     P+++T+S+LI G C++G+L     ++ +M++
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 417 RGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
            G KP+    + LI GL        A   F +  +  + P+   +N+L+ G C+     +
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 472 TVKLFMLM-GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             KL+  M G   ++P ++T   LI G    G L  A  L  +M  +GL  D  TY  +I
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL +   +   L ++K M       D       +  L K  N+D A  +F      G  
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV 431

Query: 591 PDIITY 596
           P+  T+
Sbjct: 432 PNPETF 437



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 226/487 (46%), Gaps = 44/487 (9%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
           G  Y F++++  + G + +++E+F  M       S      L++   ++   G+   L +
Sbjct: 10  GDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQ 69

Query: 172 AMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
           +M+ +         Y  L++GL   G  E A  +  ++  +    N+ T + I+K L   
Sbjct: 70  SMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKE 129

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
            +   +  + + ++  G  P+V  F+ ++  F +   +EKA ++Y  M+E    PD + Y
Sbjct: 130 AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY 189

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
            ILI GL K G+L E  ++L                S M                  M  
Sbjct: 190 HILIHGLAKIGKLDESLKIL----------------SEM-----------------AMRA 216

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G++PNVI++S LI GLC+ G L +A  +FG +L    +P+  TY++LI G C++ K+  
Sbjct: 217 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQ 276

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQ-SVRMTLIPNLFIFNTLM 460
              L++ M +  + PDAV  + LI      G M +A + + + S    L P +  FNTL+
Sbjct: 277 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 336

Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           DG C+L +     +L   MG   +  D  T+ +LI G++    L  A+ ++ QM ++   
Sbjct: 337 DGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFL 396

Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
            D ++  + + GL K  NI     +F+   ++G  P+   + +L   LIK   ++ A KL
Sbjct: 397 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 456

Query: 581 FGQLTDR 587
                 R
Sbjct: 457 MEPAKAR 463



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 170/357 (47%), Gaps = 34/357 (9%)

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT-ALDR 312
           ++ +  K   L +A +++  M     VP L+ Y++LI+    AG   +  +L  +   ++
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
            ++ D   +++++      G+   A +    M +     NV +YS +IK L ++ +  E+
Sbjct: 76  RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             +  +++     P +  ++ ++ GF +S  +     +Y +M++ G KPD V   +LI+G
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK--PDVIT 490
           L                               ++ +  +++K+   M M      P+VIT
Sbjct: 196 L------------------------------AKIGKLDESLKILSEMAMRAAGYVPNVIT 225

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
            + LI G+   G L  A+ +F  ML+ G  P+  TY+ +I GL + + +     +F+ M 
Sbjct: 226 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMT 285

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSL 606
           +  + PD   YN L+    K  ++D A KL+ +++   GL+P I+T+NT+I G+C L
Sbjct: 286 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 342



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 10/294 (3%)

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR- 382
           V+ +    G + +A++ ++ M +   +P++++Y++LI   C  G   +A  LF Q + R 
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLF-QSMKRE 74

Query: 383 -RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA---- 437
            R+EP   TY++LI G C SG       L   M  + +  +    S +I  L+ +A    
Sbjct: 75  KRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEE 134

Query: 438 -LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
             +   + +     P++F FN +M G  R        +++  M     KPD +++ +LI 
Sbjct: 135 SYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIH 194

Query: 497 GIASQGSLSSAILLFFQMLKR--GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           G+A  G L  ++ +  +M  R  G  P+VIT+S +IHGL +   +   L +F  M   G 
Sbjct: 195 GLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGC 254

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            P+   Y  L+  L +   +  A +LF ++T   + PD + YN++I GYC   S
Sbjct: 255 KPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGS 308



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 179/388 (46%), Gaps = 31/388 (7%)

Query: 56  KWTHNCV-----SSPNIAQLIHVLLQSDMRD--VASHVFD-----KMVIQFGKTYNFFRL 103
           +WT+N +     SS N      +L  S+MRD  +A++VF      K +++  K    +++
Sbjct: 81  RWTYNTLISGLCSSGNTEGARKLL--SEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKV 138

Query: 104 FRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSC 156
             + +   GC+     ++ +++ + R   ++++ E++ +M + G    PD V    L+  
Sbjct: 139 LEEMMA-AGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESG--YKPDNVSYHILIHG 195

Query: 157 LVDSNSVGQYYKLCR--AMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFV 210
           L     + +  K+    AMR  G+      +  L++GL R G +E A  +   +++ G  
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 255

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN  T   ++  LC   ++  A  LF+ +      P+ V +++LI  +CK   +++A +L
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 315

Query: 271 YNLMME-MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
           Y  M     L P ++ ++ LIDG  K G+L   NEL+     +GL  D   +  ++    
Sbjct: 316 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLS 375

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
               +  A++ Y +M    FL + +S    + GLC+ G + +A  +F         P+  
Sbjct: 376 RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPE 435

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
           T+  L +   K G++ D   L +    R
Sbjct: 436 TFRILSESLIKLGRVEDAQKLMEPAKAR 463



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 1/182 (0%)

Query: 422 DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           D VV SL   G++  AL  F      + +P+L  +N L++  C        + LF  M  
Sbjct: 14  DFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKR 73

Query: 482 YN-IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
              ++PD  T+  LI G+ S G+   A  L  +M  + +  +V TYS+II  L K     
Sbjct: 74  EKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPE 133

Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
               + + M   G  PD+  +N ++    +  N++ A +++  + + G +PD ++Y+ +I
Sbjct: 134 ESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILI 193

Query: 601 CG 602
            G
Sbjct: 194 HG 195



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/321 (20%), Positives = 126/321 (39%), Gaps = 56/321 (17%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVI 92
           N ++    ++NN   A + ++        P+      LIH L +    D +  +  +M +
Sbjct: 155 NGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAM 214

Query: 93  QF-GKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
           +  G   N               +S LI    R G++++++E+F  M + G   +     
Sbjct: 215 RAAGYVPNVI------------TFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 262

Query: 152 RLMSCLVDSNSVGQ----YYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQ- 206
            L++ L  +  V Q    + K+ +A        Y  L+ G  ++G ++ A  ++R++   
Sbjct: 263 TLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 322

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
            G  P IVT N ++   C  G++G A+ L   +   G   +  T+  LI    +  KL++
Sbjct: 323 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDE 382

Query: 267 AFQLYNLMMEMDL-----------------------------------VPDLIIYSILID 291
           A ++Y  M E                                      VP+   + IL +
Sbjct: 383 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 442

Query: 292 GLFKAGRLKEGNELLLTALDR 312
            L K GR+++  +L+  A  R
Sbjct: 443 SLIKLGRVEDAQKLMEPAKAR 463


>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           pusilla]
          Length = 431

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 236/495 (47%), Gaps = 80/495 (16%)

Query: 53  QFFKWTHNCVSSPN----------IAQLIHVLLQSDMRDVASHVFDKMVIQFGK--TYNF 100
            FF W    +SSP+             +IH L    M   A  +   +V + GK      
Sbjct: 2   SFFTW----LSSPSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAV 57

Query: 101 FRLFRDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
           F    ++ G    D   +S LI  Y+  G + +++E +    +  +++  D  ++++  L
Sbjct: 58  FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHL 117

Query: 158 VDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           +      +Y+KL          V+ F                 + ++++ G+  ++   N
Sbjct: 118 MKL----KYFKL----------VWGF-----------------YEEILECGYPASLYFFN 146

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
            ++ R C +G I  A S+FD +   G +P+VV+++TL+N + +   L++ F+L + M+  
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
            + PD   YS+LI+GL K  ++ + NEL    L +GL  + V F++++D +   G V  A
Sbjct: 207 GVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLA 266

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++ Y RML+   LP++I+Y+ LI GLC++G L +A  L  +++++ L+P  +TY++LIDG
Sbjct: 267 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDG 326

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFN 457
            CK G L   F     MI+  ++ D V  + LI+GL                        
Sbjct: 327 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL------------------------ 362

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
                 C+  R+ D  K+   M    +KPD  T+T++I     +G +     L  +M + 
Sbjct: 363 ------CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRN 416

Query: 518 GLTPDVITYSAIIHG 532
           G  P V+TY+ +++G
Sbjct: 417 GHVPSVVTYNVLMNG 431



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 184/387 (47%), Gaps = 30/387 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  L+   L  G + +A   +R   +        TC K+L+ L            ++ +
Sbjct: 74  VFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 133

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   ++  F+ L++ FCK+  +  A  +++ + +  L P ++ Y+ L++G  + G L
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            EG  L    L  G++ D   +S +++       +  A + +D ML  G +PN ++++ L
Sbjct: 194 DEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 253

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C++GR+  A  ++ ++L + L P L+TY++LI G CK G L+    L D M+ +GL
Sbjct: 254 IDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGL 313

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           KPD +                               + TL+DGCC+        +    M
Sbjct: 314 KPDKIT------------------------------YTTLIDGCCKEGDLDTAFEHRKRM 343

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              NI+ D + +T LI G+  +G    A  +  +ML  GL PD  TY+ II+   K  ++
Sbjct: 344 IQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDV 403

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLN 566
             G  + K M+RNG  P +  YNVL+N
Sbjct: 404 WKGSRLLKEMQRNGHVPSVVTYNVLMN 430



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 186/383 (48%), Gaps = 13/383 (3%)

Query: 230 GNASSLFDVLLLVG--PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           G+AS++F  +L      + ++  FS LI A+ +   L  A + Y L  E  L        
Sbjct: 52  GSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCR 111

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +++ L K    K         L+ G    +  F+ +M  +   GD+  A   +D +   
Sbjct: 112 KVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKW 171

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V+SY+ L+ G  + G L E   L   +L   ++P   TYS LI+G CK  K+ D 
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDA 231

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+D M+ +GL P+ V  + LI+G         A+  + + +  +L+P+L  +NTL+ G
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYG 291

Query: 463 CCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
            C+   LK+A D +   ++ G+   KPD IT+T LI G   +G L +A     +M++  +
Sbjct: 292 LCKKGDLKQANDLIDEMVMKGL---KPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENI 348

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             D + Y+A+I GL +         M + M   G+ PD   Y +++N   K+ ++    +
Sbjct: 349 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSR 408

Query: 580 LFGQLTDRGLEPDIITYNTIICG 602
           L  ++   G  P ++TYN ++ G
Sbjct: 409 LLKEMQRNGHVPSVVTYNVLMNG 431



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 165/328 (50%), Gaps = 5/328 (1%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+ ++S LI    ++G L++  E      +  L +       V++  + +         Y
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + +L  G+  ++  ++IL+   C+ G +  A  +F  +    L PS+++Y++L++G+ + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L +GF L   M+  G++PD    S+LINGL     M DA   F + +   L+PN   F
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  R    ++++  M   ++ PD+IT+  LI G+  +G L  A  L  +M+ 
Sbjct: 251 TTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVM 310

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL PD ITY+ +I G  K  ++       K M +  +  D   Y  L++ L +E     
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+  ++   GL+PD  TY  II  +C
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIINEFC 398



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 54/122 (44%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           + D+   + LI      G L  AI  +    +  L     T   ++  L K K   +   
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            ++ +   G    +  +N+L++   K+ ++  A  +F  +T  GL P +++YNT++ GY 
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 605 SL 606
            L
Sbjct: 189 RL 190


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/593 (23%), Positives = 264/593 (44%), Gaps = 59/593 (9%)

Query: 47  NPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRD 106
           NP+ AI+F  W  +   +      +H  L++ +      +    +++  +   F R+  D
Sbjct: 87  NPSHAIKFHSWLSHVNPTLAAHNSVHRALRNTLHRKGPALLSVDLLRELRNLGF-RVTED 145

Query: 107 SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
            L         L+ ++ R+G  + S  +F  +S +G+  +  L   L+  LV SNS+   
Sbjct: 146 LL-------CALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLA 198

Query: 167 YKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
           Y   + M     CV     Y  L++G+ + GV++ A  + RQ+  +G  PN+ T   +++
Sbjct: 199 YLKFQQMAADN-CVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIE 257

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL----------- 270
             CI  ++  A  +F+ +   G  PN  T   L++   +     KA +L           
Sbjct: 258 GFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQ 317

Query: 271 --YNLMMEMDLV---------------------------PDLIIYSILIDGLFKAGRLKE 301
              + M+  D V                           P   ++++++  L K   L+E
Sbjct: 318 ERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRE 377

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
             ++      +G+K  +  + ++++            + Y ++++ G + NV SY+++I 
Sbjct: 378 TCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIIN 437

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
             C+   +  A   F  + +R + P+L+T+++LI+G CK G +     L +++++ GLKP
Sbjct: 438 CFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKP 497

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D    S +++GL       +AL  F + +   + PN  I+N L+   C +     +VKL 
Sbjct: 498 DIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLL 557

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M    I PD  ++  LI+       +  A  LF  M + GL PD  TYSA I  L + 
Sbjct: 558 RRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSES 617

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
             +     MF  ME NG +PD  I N+++ +L+++  ++ A  +  +   +G+
Sbjct: 618 GRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGI 670



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 123/534 (23%), Positives = 235/534 (44%), Gaps = 59/534 (11%)

Query: 36  NAILANLIKTNNPTPAIQFFKW--THNCVSSP-NIAQLIHVLLQSDMRDVASHVFDKMVI 92
           NA++  L+K+N+   A   F+     NCV+       LIH + +  + D A     ++V 
Sbjct: 183 NALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEAL----RLVR 238

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           Q     +F  +F          Y+ LIE +    ++DE+  +F  M D G+Y +   V+ 
Sbjct: 239 QMKDKGHFPNVF---------TYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRA 289

Query: 153 LMS----CLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
           L+     C+  S ++                  E L   L R+   E    M        
Sbjct: 290 LVHGVFRCVDPSKAL------------------ELLSEFLDREQEQERVHFM-------- 323

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLF--DVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
                + C+ +L  L  N  +     +F   VL   G  P    F+ ++    K A+L +
Sbjct: 324 -----LACDTVLYCLA-NNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRE 377

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
              ++ ++ +  +   +  Y  LI+ L+K    +EG+ +    +  GL  +V  ++ +++
Sbjct: 378 TCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIIN 437

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
            +     +  A + +  M   G +PN+++++ LI G C+ G + +A  L   +L   L+P
Sbjct: 438 CFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKP 497

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQS 444
            + T+SS++DG C+  +  +    +  MI+ G+ P+AV+ ++LI  L  +GD  R     
Sbjct: 498 DIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLL 557

Query: 445 VRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            RM    + P+ + +N L+   CR+ +     KLF  M    + PD  T++  I  ++  
Sbjct: 558 RRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSES 617

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           G L  A  +F+ M   G +PD    + II  L + + +    ++ +   + G++
Sbjct: 618 GRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGIS 671



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/205 (20%), Positives = 89/205 (43%), Gaps = 31/205 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +S +++   +I + +E++E F  M + GI  +P+ V                        
Sbjct: 502 FSSIVDGLCQIKRTEEALECFTEMIEWGI--NPNAV------------------------ 535

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                +Y  L+  L   G +  +  + R++ + G  P+  + N +++  C   ++  A  
Sbjct: 536 -----IYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKK 590

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           LFD +   G  P+  T+S  I A  +  +LE+A +++  M      PD  I +++I  L 
Sbjct: 591 LFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILV 650

Query: 295 KAGRLKEGNELLLTALDRGLKLDVV 319
           +   ++E   ++     +G+ L+ +
Sbjct: 651 QQEYVEEAQNIIERCRQKGISLNSI 675


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 143/569 (25%), Positives = 251/569 (44%), Gaps = 91/569 (15%)

Query: 124 RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF 183
           R+  +DES+ I   M D  + +S    Q   S L +     + + + + ++ K    Y  
Sbjct: 155 RLRMVDESLYILKKMKDRNLNVS---TQSYNSVLYNFRETDKMWDVYKEIKDKNEHTYST 211

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           +++GL R+  +E+A    R    +   P++V+ N I+   C  G +  A S F  +L  G
Sbjct: 212 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCG 271

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             P+V + + LIN  C    + +A +L + M +  + PD + Y+IL+ G    G +    
Sbjct: 272 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAG 331

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF-LPNVISYSILIKG 362
           E++   LD+GL  DV+ ++ ++     +G++   +     ML+ GF L ++I YS+++ G
Sbjct: 332 EVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSG 391

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK------------------- 403
           LC+ GR+ EA  LF  +    L P L+ YS +I G CK GK                   
Sbjct: 392 LCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPN 451

Query: 404 ----------------LRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
                           L +  SL D++I  G   D ++ +++I+G      + +AL  F 
Sbjct: 452 SRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFK 511

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
            ++   + PN+  FN+L+ G C+ +   +  K+  ++ +Y + P V+++T L+   A+ G
Sbjct: 512 VAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCG 571

Query: 503 SLSS------------------------------------------AILLFF-----QML 515
           S+ S                                           IL  F      M 
Sbjct: 572 SIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDME 631

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
             G+TPD ITY+ II  L + K++S    +FK M+   + P  A YN+L++ L     + 
Sbjct: 632 SEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIR 691

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
            A +    L  R +      Y T+I  +C
Sbjct: 692 KADRFLYSLQKRNVSLSKFAYTTVIKAHC 720



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 230/509 (45%), Gaps = 38/509 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--------RLMSCLVDSNSVGQY 166
           ++ LI     +G I E++E+ + M+  G+   PD V          L+  +  +  V Q 
Sbjct: 279 HNILINGLCLVGSIAEALELASDMNKHGV--EPDSVTYNILVKGFHLLGMISGAGEVIQ- 335

Query: 167 YKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF-VPNIVTCNKILK 221
                 M  KG       Y  L+ G  + G I+    + + ++ RGF + +I+  + +L 
Sbjct: 336 -----DMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLS 390

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
            LC  G++  A SLF  L   G  P++V +S +I+  CK  K + A ++Y+ M    ++P
Sbjct: 391 GLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILP 450

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           +      ++ GL + G L E   LL + +  G  LD+++++ V+D Y   G +  A++ +
Sbjct: 451 NSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELF 510

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
              +  G  PNV +++ LI G C+   + EA  +   + +  L PS+++Y++L+D +   
Sbjct: 511 KVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANC 570

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-MGDALRFFFQSVRMTLI---------- 450
           G ++    L   M   G+ P  V  S++  GL  G  L    Q +R  ++          
Sbjct: 571 GSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDM 630

Query: 451 ------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
                 P+   +NT++   CR+K  +   +LF  M   N+ P   T+ +LI  +   G +
Sbjct: 631 ESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCI 690

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A    + + KR ++     Y+ +I       +  + + +F  +   G    I  Y+ +
Sbjct: 691 RKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAV 750

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDI 593
           +N L +      +   F  +  RG+ PD+
Sbjct: 751 INRLCRRHLAIESKYFFCLMLSRGISPDL 779



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 198/395 (50%), Gaps = 31/395 (7%)

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM----EMDLVPDLI------ 284
           ++D+LL +  +  +V  S  I    K+  L  + Q YN ++    E D + D+       
Sbjct: 145 VWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKDK 204

Query: 285 ---IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
               YS ++DGL +  +L++    L T+  + +   VV F+S+M +Y  +G V  A   +
Sbjct: 205 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFF 264

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             +L  G +P+V S++ILI GLC  G + EA  L   +    +EP  +TY+ L+ GF   
Sbjct: 265 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLL 324

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLING------------LMGDALRFFFQSVRMTL 449
           G +     +  +M+ +GL PD +  ++L+ G            L+ D L   F+    ++
Sbjct: 325 GMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFE--LKSI 382

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
           IP    ++ ++ G C+  R  + + LF  +  Y + PD++ ++++I G+   G    A+ 
Sbjct: 383 IP----YSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVR 438

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           ++ +M  + + P+  T  AI+ GL +   +     +   +  +G   DI +YN++++   
Sbjct: 439 VYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYA 498

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           K   ++ AL+LF    + G+ P++ T+N++I GYC
Sbjct: 499 KSGCIEEALELFKVAIESGITPNVATFNSLIYGYC 533



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 192/464 (41%), Gaps = 101/464 (21%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS ++    + G++DE++ +F  +   G  L+PDLV                        
Sbjct: 385 YSVMLSGLCKTGRVDEALSLFYDLEAYG--LTPDLV------------------------ 418

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  +++GL + G  + A  ++ ++  +  +PN  T   I+  LC  G +  A S
Sbjct: 419 -----AYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARS 473

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L D L+  G   +++ ++ +I+ + K   +E+A +L+ + +E  + P++  ++ LI G  
Sbjct: 474 LLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYC 533

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K   + E  ++L      GL   VV ++++MDAY   G +    +    M   G  P  +
Sbjct: 534 KTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNV 593

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRL----------------EPSLLTYSSLIDGF 398
           +YS++ KGLC+  +L E C    QVL  R+                 P  +TY+++I   
Sbjct: 594 TYSVIFKGLCRGWKL-ENCN---QVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYL 649

Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNL 453
           C+   L   F L+  M  + L P +   ++LI+     G +  A RF +   +  +  + 
Sbjct: 650 CRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSK 709

Query: 454 F--------------------IFNTLMDG---------------CCRLKRATDTVKLFML 478
           F                    +FN L+D                 CR   A ++   F L
Sbjct: 710 FAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCL 769

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
           M    I PD+    V+I+   S   LS  I       K GL PD
Sbjct: 770 MLSRGISPDLDICEVMIK---SDELLSWTI-------KWGLLPD 803


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 230/475 (48%), Gaps = 74/475 (15%)

Query: 58  THNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSF 117
           TH  +S      LI V++    +  AS VF  ++   G   +   +F           S 
Sbjct: 28  THQMLSEAK--SLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF-----------SG 74

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
           LI  Y+  G + +++E +    +  +++  D  ++++  L+      +Y+KL        
Sbjct: 75  LITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL----KYFKL-------- 122

Query: 178 FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFD 237
             V+ F                 + ++++ G+  ++   N ++ R C +G I  A S+FD
Sbjct: 123 --VWGF-----------------YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFD 163

Query: 238 VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAG 297
            +   G +P+VV+++TL+N + +   L++ F+L + M+   ++PD+  YS+LI+GL K  
Sbjct: 164 AITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKES 223

Query: 298 RLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           ++ + NEL    L +GL  + V F++++D +   G V  A++ Y RML+   LP++I+Y+
Sbjct: 224 KMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYN 283

Query: 358 ILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR 417
            LI GLC++G L +A  L  ++ ++ L+P   TY++LIDG CK G L   F     MI+ 
Sbjct: 284 TLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQE 343

Query: 418 GLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            ++ D V  + LI+GL                              C+  R+ D  K+  
Sbjct: 344 NIRLDDVAYAALISGL------------------------------CQEGRSVDAEKMLR 373

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
            M    +KPD  T+T++I     +G +     L  +M + G  P V+TY+ +++G
Sbjct: 374 EMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 183/379 (48%), Gaps = 42/379 (11%)

Query: 230 GNASSLFDVLLLVG--PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL-VP----- 281
           G+AS++F  +L      + ++  FS LI A+ +   L  A + Y L  E  L VP     
Sbjct: 49  GSASAVFAAILETKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCR 108

Query: 282 -----------------------------DLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
                                         L  ++IL+    K G ++    +       
Sbjct: 109 KVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKW 168

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           GL+  VV ++++M+ Y+ +G +    +    ML  G LP+V +YS+LI GLC++ ++ +A
Sbjct: 169 GLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDA 228

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
             LF ++L++ L P+ +T+++LIDG CK+G++     +Y  M+ + L PD +  + LI G
Sbjct: 229 NELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYG 288

Query: 433 L--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
           L   GD   A     +     L P+ F + TL+DGCC+        +    M   NI+ D
Sbjct: 289 LCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 348

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
            + +  LI G+  +G    A  +  +ML  GL PD  TY+ II+   K  ++  G  + K
Sbjct: 349 DVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLK 408

Query: 548 LMERNGVAPDIAIYNVLLN 566
            M+RNG AP +  YNVL+N
Sbjct: 409 EMQRNGHAPSVVTYNVLMN 427



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 161/328 (49%), Gaps = 5/328 (1%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+ ++S LI    + G L++  E      +  L +       V++  + +         Y
Sbjct: 68  DIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 127

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + +L  G+  ++  ++IL+   C+ G +  A  +F  +    L PS+++Y++L++G+ + 
Sbjct: 128 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 187

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L +GF L   M+  G+ PD    S+LINGL     M DA   F + +   LIPN   F
Sbjct: 188 GHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 247

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  R    ++++  M   ++ PD+IT+  LI G+  +G L  A  L  +M  
Sbjct: 248 TTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 307

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL PD  TY+ +I G  K  ++       K M +  +  D   Y  L++ L +E     
Sbjct: 308 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVD 367

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+  ++   GL+PD  TY  II  +C
Sbjct: 368 AEKMLREMLSVGLKPDTGTYTMIINEFC 395



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 54/122 (44%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           + D+   + LI      G L  AI  +    +  L     T   ++  L K K   +   
Sbjct: 66  RSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 125

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            ++ +   G    +  +N+L++   K+ ++  A  +F  +T  GL P +++YNT++ GY 
Sbjct: 126 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 185

Query: 605 SL 606
            L
Sbjct: 186 RL 187


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 158/629 (25%), Positives = 285/629 (45%), Gaps = 70/629 (11%)

Query: 27  ISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHV 86
           +S   ++ A A L++L +T+ P             V  P  ++++   ++S    +  HV
Sbjct: 17  LSGAGYSPAAARLSSLAQTSTP-----------ESVLPPITSEILLESIRSSQWHIVEHV 65

Query: 87  FDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLS 146
            DK+      T     L +        + +F   N++ + ++D   +  A ++ +    S
Sbjct: 66  ADKLTPSLVST-TLLSLVKTP------NLAFNFVNHIDLYRLDFQTQCLA-IAVISKLSS 117

Query: 147 PDLVQRLMSCLVDS--NSVGQYY-KLCRA---MRGKGFCVYEFLMNGLLRKGVIENAFHM 200
           P  V +L+  +V S  NS+   + +L  A   +  K   +++ L+    +  +++ A   
Sbjct: 118 PKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIEC 177

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
              + ++GF P   TCN IL  L    +I NA   +  +  +  K NV TF+ +IN  CK
Sbjct: 178 FYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCK 237

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVV 319
           E KL+KA     +M    + P ++ Y+ L+ G    GR+ EG  L+++ +  +G + D+ 
Sbjct: 238 EGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI-EGARLIISEMKSKGFQPDMQ 296

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA------- 372
            ++ ++     + + GRA +    M   G +P+ +SY+ILI+G    G L  A       
Sbjct: 297 TYNPILS---WMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM 353

Query: 373 ----------------CGLF-------GQVLIRRLEPS-----LLTYSSLIDGFCKSGKL 404
                            GLF        ++LIR +         +TY+ LI+G+C+ G  
Sbjct: 354 VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDA 413

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
           +  F+L+D M+  G++P     + LI  L       +A   F + V   + P+L + NTL
Sbjct: 414 KKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTL 473

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           MDG C +        L   M M +I PD +T+  L+RG+  +G    A  L  +M +RG+
Sbjct: 474 MDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            PD I+Y+ +I G  K  +      +   M   G  P +  YN LL  L K    + A +
Sbjct: 534 KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEE 593

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           L  ++   G+ P+  ++ ++I    +L++
Sbjct: 594 LLREMKSEGIVPNDSSFCSVIEAMSNLDA 622


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 159/635 (25%), Positives = 271/635 (42%), Gaps = 61/635 (9%)

Query: 6   KNLLTVWRSINKCYCSESKTHI---SDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCV 62
           K L ++ R I++      K H    S + F  +N +L  +   N   PA++    +    
Sbjct: 2   KKLRSLLREISRAK-PPWKQHFHTYSAVDFAISNEVLTIIDSVNPIEPALE----SKVPF 56

Query: 63  SSPNIAQLI------------HVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGD 110
            SP+I   I              +  S  R + S V   M+I      N F L+   L +
Sbjct: 57  LSPSIVTYIIKNPPNSLLGFRFFIWASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKE 116

Query: 111 FG-CDYSF-------LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDS 160
              C +S        LI+ Y ++  I+++VE F  M D      PD+     ++  +V  
Sbjct: 117 IKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDC--KPDVFTYNTVLHVMVRK 174

Query: 161 NSV----GQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
             V    G Y ++ +         +  L++G+ + G  +NA  M  ++ QR  +PN +T 
Sbjct: 175 EVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITY 234

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
             I+  LC   +   A  LF  +   G  P+ VT++ L++ FCK  ++++A  L     +
Sbjct: 235 TIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEK 294

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
              V D   YS LIDGLF+A R ++         +  +K DV++++ +M      G    
Sbjct: 295 DRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKD 354

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A++  + M   G +P+   Y+ LIKG C  G L EA  L  ++       S  TY+ LI 
Sbjct: 355 ALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILIC 414

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPN 452
           G C+SG + D   +++ M K G  P  V  + LI+G       +  +  F  + +   P+
Sbjct: 415 GMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPS 474

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           LF+         RL +  + V             D  +   ++  +   G +  A  +  
Sbjct: 475 LFL---------RLSQGANRVL------------DTASLQTMVEQLCDSGLILKAYNILM 513

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
           Q+   G  P++ITY+ +IHG  K  NI+    +FK ++  G++PD   Y  L+N L+   
Sbjct: 514 QLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSAN 573

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
             + A  +  Q+   G  P    Y + +   C  N
Sbjct: 574 REEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRN 608



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 123/545 (22%), Positives = 224/545 (41%), Gaps = 93/545 (17%)

Query: 60  NCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKM------------------VIQFGKTY 98
           NC+  PNIA    LI  + +S     A  +FD+M                  + Q  K  
Sbjct: 191 NCL--PNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKAD 248

Query: 99  NFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
             +RLF  ++ D GC      Y+ L+  + ++G++DE++ +  Y       L     ++ 
Sbjct: 249 VAYRLFI-AMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLD----KQG 303

Query: 154 MSCLVD--------SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVI 205
            SCL+D         ++   Y K+          +Y  +M GL + G  ++A  +  ++ 
Sbjct: 304 YSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMT 363

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           +RG VP+    N ++K  C  G +  A SL   +       +  T++ LI   C+   + 
Sbjct: 364 ERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVG 423

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG-----------NELLLTALDRGL 314
            A Q++N M +    P ++ ++ LIDG  KAG +++            N  L   L +G 
Sbjct: 424 DAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGA 483

Query: 315 K--LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
              LD     ++++     G + +A     ++ + GF PN+I+Y+ILI G C+ G +  A
Sbjct: 484 NRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGA 543

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP----------- 421
             LF ++ ++ L P  +TY +LI+G   + +  D F++ D ++K G  P           
Sbjct: 544 FKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTW 603

Query: 422 -------------------------DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF-- 454
                                      V+ S+  N   G+        + M    N F  
Sbjct: 604 SCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQL 663

Query: 455 -IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             +   + G C+  R  + +K+F  +  +N+     +   LI  +   G+L  A  +F  
Sbjct: 664 APYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLY 723

Query: 514 MLKRG 518
            + +G
Sbjct: 724 TIDKG 728



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 116/246 (47%), Gaps = 25/246 (10%)

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR----GLKPDAVVCSLLING----- 432
           RRL  S ++++ +ID   K     +GF LY  ++K     G    A   ++LI       
Sbjct: 86  RRLR-SWVSHNMIIDMLIKD----NGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMD 140

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
           ++  A+  F         P++F +NT++    R +     + ++  M   N  P++ T +
Sbjct: 141 MIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFS 200

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           +LI G+   G   +A+ +F +M +R + P+ ITY+ II GL + +   V   +F  M+ +
Sbjct: 201 ILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDH 260

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
           G  PD   YN LL+   K   +D AL L      +  E D   Y     GY    SCLID
Sbjct: 261 GCIPDSVTYNALLHGFCKLGRVDEALGLL-----KYFEKD--RYVLDKQGY----SCLID 309

Query: 613 GYFKSQ 618
           G F+++
Sbjct: 310 GLFRAR 315



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 144/343 (41%), Gaps = 24/343 (6%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQ----YY 167
            C Y+ LI    R G + ++ +IF  M   G Y S      L+     + ++ +    +Y
Sbjct: 406 ACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFY 465

Query: 168 KL---------CRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
           K+          R  +G    +     + ++  L   G+I  A+++  Q+   GF PNI+
Sbjct: 466 KMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNII 525

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T N ++   C  G I  A  LF  L L G  P+ VT+ TLIN      + E AF + + +
Sbjct: 526 TYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQI 585

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           ++    P   +Y   +    +  ++     L L  L      D  V  SV + +   G+V
Sbjct: 586 LKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEK-GEV 644

Query: 335 GRAVQTYDRMLNGGFLPN---VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
             AV+    +L   F  N   +  Y+I + GLCQ GRL EA  +F  +    +  +  + 
Sbjct: 645 EEAVRG---LLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSC 701

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
             LI    K G L     ++   I +G      +C+ L+  L+
Sbjct: 702 VKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLL 744


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 240/496 (48%), Gaps = 38/496 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I +  + GK+D+++E+F  MS+ G+  +PD+                         
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGV--APDVT------------------------ 220

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNAS 233
                 Y  L++G L++   + A  +  ++++   V PN+ T N ++  L   G++ +  
Sbjct: 221 -----CYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            +++ +     + ++ T+S+LI+  C    ++KA  ++N + E     D++ Y+ ++ G 
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            + G++KE  EL    ++    +++V ++ ++   +  G +  A   +  M   G+  + 
Sbjct: 336 CRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
            +Y I I GLC  G + +A G+  +V        +  Y+S+ID  CK  +L +  +L   
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454

Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
           M K G++ ++ VC+ LI GL     +G+A  F  +  +    P +  +N L+ G C+  +
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +       M     KPD+ T+++L+ G+     +  A+ L+ Q L+ GL  DV+ ++ 
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +IHGL     +   + +   ME      ++  YN L+    K  + + A  ++G +   G
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634

Query: 589 LEPDIITYNTIICGYC 604
           L+PDII+YNTI+ G C
Sbjct: 635 LQPDIISYNTIMKGLC 650



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 200/439 (45%), Gaps = 40/439 (9%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  PN+ T N ++K  C   +   A    D +   G KP+V ++ST+IN   K  KL+ A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMD 326
            +L++ M E  + PD+  Y+ILIDG  K    K   EL    L D  +  +V   + ++ 
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263

Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
                G V   ++ ++RM       ++ +YS LI GLC  G + +A  +F ++  R+   
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSL--------------YDNMIK---------------- 416
            ++TY++++ GFC+ GK+++   L              Y+ +IK                
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWR 383

Query: 417 ----RGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
               +G   D       +  L +NG +  AL    +        +++ + +++D  C+ K
Sbjct: 384 LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           R  +   L   M  + ++ +      LI G+     L  A     +M K G  P V++Y+
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            +I GL K           K M  NG  PD+  Y++LL  L ++  +D AL+L+ Q    
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS 563

Query: 588 GLEPDIITYNTIICGYCSL 606
           GLE D++ +N +I G CS+
Sbjct: 564 GLETDVMMHNILIHGLCSV 582



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 181/395 (45%), Gaps = 8/395 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI      G +D++  +F  + +    +       ++        + +  +L R M 
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME 352

Query: 175 GKG---FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            K       Y  L+ GLL  G I+ A  + R +  +G+  +  T    +  LC+NG +  
Sbjct: 353 HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNK 412

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  +   +   G   +V  ++++I+  CK+ +LE+A  L   M +  +  +  + + LI 
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           GL +  RL E +  L      G +  VV ++ ++      G  G A      ML  G+ P
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           ++ +YSIL+ GLC+  ++  A  L+ Q L   LE  ++ ++ LI G C  GKL D  ++ 
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592

Query: 412 DNMIKRGLKPDAVVCSLLINGL--MGDALR---FFFQSVRMTLIPNLFIFNTLMDGCCRL 466
            NM  R    + V  + L+ G   +GD+ R    +    +M L P++  +NT+M G C  
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMC 652

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
           +  +  ++ F     + I P V T  +L+R + ++
Sbjct: 653 RGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 211/401 (52%), Gaps = 18/401 (4%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           PN      ++  L  + ++G+A+   +++   G  P+VVTF+ LI  FCK   +E+A+++
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 271 YNLMMEMDLV-PDLIIYSILIDGLFKAGRLKEGNELLLT-ALDRGLKLDVVVFSSVMDAY 328
           +  M++ +   PD  +Y +LIDG  K  R+    ELL    ++R ++ DVV+++S++D  
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVD-- 126

Query: 329 VGIGDVGRAVQTY----DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
            G+    R ++ +    + M+  G  P V++Y+ LI+G C+  ++  A  ++  +L R++
Sbjct: 127 -GLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKI 185

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
           +P++++YS +IDG  K+G++ D + +   M   G + + V+ + LI+GL     + DA  
Sbjct: 186 QPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYA 245

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
            +    R    PN   + TL+D  CR  R    + LF  +  Y    DV  +T ++ G+ 
Sbjct: 246 LYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CPLDVAMYTAVVSGLC 304

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +  L  A  LF +M   G++ D   Y+ ++HG F+          F+++E  G  P   
Sbjct: 305 RERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSE---EAFRILEELGDDPGCV 361

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
              +  N +I  C L++ + LF ++  RG+ PD  TY+ +I
Sbjct: 362 ANLLTYNTVIAGCCLESGMVLFYEMRQRGIAPDFATYSALI 402



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 205/423 (48%), Gaps = 24/423 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
           ++ LI+   +  ++ ++      M D GI+  PD+V    L+     +  V + +++ + 
Sbjct: 14  FASLIDALSKSNRLGDAARALELMCDAGIH--PDVVTFTALIRGFCKNRMVERAWEIFQE 71

Query: 173 MRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQV-IQRGFVPNIVTCNKILKRLCIN 226
           M     C     +Y  L++G  ++  ++ A  + R++ ++R   P++V  N I+  LC +
Sbjct: 72  MIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRS 131

Query: 227 GQIGNASSLFD-VLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
            +   A    D  ++  G  P VVT+++LI   CK  K++ A  ++N M+E  + P ++ 
Sbjct: 132 NRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVS 191

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
           YS++IDGL KAGR+ +   ++      G +L+VV++++++D     G +  A   Y  M 
Sbjct: 192 YSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMK 251

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP-SLLTYSSLIDGFCKSGKL 404
             G  PN  +Y+ LI   C+  R   A GLF    IR   P  +  Y++++ G C+  +L
Sbjct: 252 RSGAFPNQRTYATLIDTFCRNDRTETALGLFDH--IRDYCPLDVAMYTAVVSGLCRERRL 309

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQ-SVRMTLIPNLFIFNT 458
            D  +L+  M   G+  D    ++L++G        +A R   +       + NL  +NT
Sbjct: 310 DDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNT 369

Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
           ++ GCC        + LF  M    I PD  T++ LI  +   G +  A  L  +ML  G
Sbjct: 370 VIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASG 425

Query: 519 LTP 521
           L+P
Sbjct: 426 LSP 428



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 151/294 (51%), Gaps = 11/294 (3%)

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            F+S++DA      +G A +  + M + G  P+V++++ LI+G C+  R+VE      Q 
Sbjct: 13  AFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKN-RMVERAWEIFQE 71

Query: 380 LIR--RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM-IKRGLKPDAVVCSLLINGLMG- 435
           +I+  R +P    Y  LIDG+CK  ++     L   M ++R ++PD V+ + +++GL   
Sbjct: 72  MIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRS 131

Query: 436 ----DALRFFFQS-VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
               +A +F  ++ VR    P +  + +L+ G C+ K+    + ++  M    I+P +++
Sbjct: 132 NRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVS 191

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           ++V+I G++  G +  A  +  +M   G   +V+ Y+ +I GL K   +     ++++M+
Sbjct: 192 YSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMK 251

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           R+G  P+   Y  L++   +    + AL LF  + D     D+  Y  ++ G C
Sbjct: 252 RSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CPLDVAMYTAVVSGLC 304



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 2/124 (1%)

Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM 545
           P+      LI  ++    L  A      M   G+ PDV+T++A+I G  K + +     +
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 546 FKLM-ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL-TDRGLEPDIITYNTIICGY 603
           F+ M + N   PD  +Y VL++   KE  +D AL+L  ++  +R ++PD++ YN+I+ G 
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128

Query: 604 CSLN 607
           C  N
Sbjct: 129 CRSN 132



 Score = 43.1 bits (100), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 32/165 (19%), Positives = 69/165 (41%), Gaps = 1/165 (0%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++    R  ++D++  +F  M   G+         L+     S    + +++   + 
Sbjct: 296 YTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELG 355

Query: 175 GKGFCVYEFLM-NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
               CV   L  N ++    +E+   +  ++ QRG  P+  T + ++ RL  +G+I  A 
Sbjct: 356 DDPGCVANLLTYNTVIAGCCLESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAF 415

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
            L + +L  G  P       ++   C   + + A +L  + M +D
Sbjct: 416 DLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKLIEMAMAVD 460


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 204/432 (47%), Gaps = 23/432 (5%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NG  R G + +A ++   +      P+  T N +LK LC   Q   A  L + +
Sbjct: 180 TYTALINGYCRSGRLADALNL---IASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEM 236

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +     PN VTF+T I +FC+   L+ A QL   M      PD++IYS L++G  + GR+
Sbjct: 237 IRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRV 296

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYV---GIGDVGRAVQTYDRMLNGGFLPNVISY 356
            +   LL T L    K + V +++ +          DVG  +     M+     PN  ++
Sbjct: 297 DDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIA---EMVRKDCPPNEATF 350

Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
           S+L   LCQ G +  A  +  Q+      P ++ Y++LI+ F + G++ D   L D+M+ 
Sbjct: 351 SMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML- 409

Query: 417 RGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
               PD +  +  +  L       D      Q +R         FN L+D  C+      
Sbjct: 410 --CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNH 467

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            +++F  M  Y   PD++T++ LI G + QG + SAI LF  M      PD+ +Y+A++ 
Sbjct: 468 AIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM---PCKPDIFSYNAVLK 524

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
           GL +         +   M R    P+   +N+L+N L ++   D A+++F Q+ + G  P
Sbjct: 525 GLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTP 584

Query: 592 DIITYNTIICGY 603
           DI TYN +I G+
Sbjct: 585 DIFTYNALINGF 596



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/522 (24%), Positives = 225/522 (43%), Gaps = 86/522 (16%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  Y R G++ +++ + A M      ++PD                          
Sbjct: 181 YTALINGYCRSGRLADALNLIASMP-----VAPDTY------------------------ 211

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++ GL      E A  +  ++I+    PN VT    ++  C NG + +A  
Sbjct: 212 -----TYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQ 266

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G  P+VV +STL+N F ++ +++ A  L N M+     P+ + Y+  + GL 
Sbjct: 267 LLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLC 323

Query: 295 KAGRLKEGNELLLTALDR-----------------------------------GLKLDVV 319
            A R K+  EL+   + +                                   G + DVV
Sbjct: 324 MAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVV 383

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
           +++++++ +   G V  A+   D ML     P+ IS++  +K LC+  R  +   L  Q+
Sbjct: 384 IYNTLINYFSEQGRVDDALMLLDSMLCN---PDTISFNAALKALCRTERWYDVEELIAQM 440

Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LM 434
           L        +T++ LID  C+ G +     +++ M K    PD V  S LING     L+
Sbjct: 441 LREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLV 500

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
             A+  F QS  M   P++F +N ++ G CR  R  D  +L   M   +  P+ IT  +L
Sbjct: 501 ESAIELF-QS--MPCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNIL 557

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           I  +  +G    AI +F QM + G TPD+ TY+A+I+G  +   +   L++   M     
Sbjct: 558 INSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTM---SC 614

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
            PD   YN  L  L +      A ++  ++  +   P+ +T+
Sbjct: 615 KPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 200/430 (46%), Gaps = 47/430 (10%)

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           + V+ N ++   C +G++ +A  + +   + G   NVVT++ LIN +C+  +L  A    
Sbjct: 143 DAVSHNTLVAGYCRDGRLADAERVLEAAKVSGAA-NVVTYTALINGYCRSGRLADAL--- 198

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
           NL+  M + PD   Y+ ++ GL  A + ++  EL+   +      + V F++ + ++   
Sbjct: 199 NLIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQN 258

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G +  AVQ  +RM   G  P+V+ YS L+ G  +QGR+ +A  L   +L +   P+ + Y
Sbjct: 259 GLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCK---PNTVCY 315

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVR 446
           ++ + G C + + +D   L   M+++   P+    S+L      +GL+  A+    Q  +
Sbjct: 316 NAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQK 375

Query: 447 MTLIPNLFIFNTLMD--------------------------------GCCRLKRATDTVK 474
               P++ I+NTL++                                  CR +R  D  +
Sbjct: 376 YGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCNPDTISFNAALKALCRTERWYDVEE 435

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M   +     +T  +LI  +   G ++ AI +F QM K   TPD++TYS++I+G  
Sbjct: 436 LIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFS 495

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           +   +   + +F+ M      PDI  YN +L  L +    + A +L   +  +   P+ I
Sbjct: 496 EQGLVESAIELFQSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEI 552

Query: 595 TYNTIICGYC 604
           T+N +I   C
Sbjct: 553 TFNILINSLC 562


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/594 (22%), Positives = 253/594 (42%), Gaps = 83/594 (13%)

Query: 52  IQFFKWTHN----CVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLF 104
           ++F  W +     C  +P       LI  L  S   D A  +FD+M  +  K   F    
Sbjct: 128 VEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEF---- 183

Query: 105 RDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVG 164
                     +  L+  Y + G  D+ +E+   M   G+   P+ V              
Sbjct: 184 ---------TFGILVRGYCKAGLTDKGLELLNAMESFGVL--PNKV-------------- 218

Query: 165 QYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
                          +Y  +++   R+G  +++  M  ++ + G VP+IVT N  +  LC
Sbjct: 219 ---------------IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263

Query: 225 INGQIGNASSLFDVLLLVG----PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
             G++ +AS +F  + L      P+PN +T++ ++  FCK   LE A  L+  + E D +
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323

Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
             L  Y+I + GL + G+  E   +L    D+G+   +  ++ +MD    +G +  A   
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
              M   G  P+ ++Y  L+ G C  G++  A  L  +++     P+  T + L+    K
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA-----------LRFFFQS----- 444
            G++ +   L   M ++G   D V C+++++GL G             +R    +     
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503

Query: 445 ------------VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
                       +    +P+L  ++TL++G C+  R  +   LF  M    ++PD + + 
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
           + I     QG +SSA  +   M K+G    + TY+++I GL     I     +   M+  
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           G++P+I  YN  +  L +   ++ A  L  ++  + + P++ ++  +I  +C +
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV 677



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/490 (23%), Positives = 215/490 (43%), Gaps = 67/490 (13%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           +Y  L+   +++  +E    +++ ++  G  P   T N +++ LC +  +  A  LFD +
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEM 173

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G KPN  TF  L+  +CK    +K  +L N M    ++P+ +IY+ ++    + GR 
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN 233

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL----PNVIS 355
            +  +++    + GL  D+V F+S + A    G V  A + +  M    +L    PN I+
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293

Query: 356 YSILIKGLCQ-----------------------------------QGRLVEACGLFGQVL 380
           Y++++KG C+                                    G+ +EA  +  Q+ 
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----D 436
            + + PS+ +Y+ L+DG CK G L D  ++   M + G+ PDAV    L++G       D
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413

Query: 437 ALRFFFQS-VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           A +   Q  +R   +PN +  N L+    ++ R ++  +L   M       D +T  +++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473

Query: 496 RGIASQGSLSSAILLFFQMLKRGLT-----------------------PDVITYSAIIHG 532
            G+   G L  AI +   M   G                         PD+ITYS +++G
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533

Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
           L K    +   ++F  M    + PD   YN+ ++   K+  + +A ++   +  +G    
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593

Query: 593 IITYNTIICG 602
           + TYN++I G
Sbjct: 594 LETYNSLILG 603



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 206/426 (48%), Gaps = 32/426 (7%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P++   N +L+      ++   S L+  ++L G  P   TF+ LI A C  + ++ A +L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
           ++ M E    P+   + IL+ G  KAG   +G ELL      G+  + V++++++ ++  
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL----EP 386
            G    + +  ++M   G +P++++++  I  LC++G++++A  +F  + +        P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFF 441
           + +TY+ ++ GFCK G L D  +L++++ +          ++ + GL+      +A    
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            Q     + P+++ +N LMDG C+L   +D   +  LM    + PD +T+  L+ G  S 
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G + +A  L  +M++    P+  T + ++H L+K   IS    + + M   G   D    
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 562 NVLLNMLIKECNLDAALKL-------------------FGQLTDRGLE----PDIITYNT 598
           N++++ L     LD A+++                    G + D  +E    PD+ITY+T
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529

Query: 599 IICGYC 604
           ++ G C
Sbjct: 530 LLNGLC 535



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 178/370 (48%), Gaps = 11/370 (2%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           KP+V  ++ L+ +  KE ++E    LY  M+   + P    +++LI  L  +  +    E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           L     ++G K +   F  ++  Y   G   + ++  + M + G LPN + Y+ ++   C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR---GL-K 420
           ++GR  ++  +  ++    L P ++T++S I   CK GK+ D   ++ +M      GL +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 421 PDAVVCSLLIN-----GLMGDALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVK 474
           P+++  +L++      GL+ DA +  F+S+R    + +L  +N  + G  R  +  +   
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDA-KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   M    I P + ++ +L+ G+   G LS A  +   M + G+ PD +TY  ++HG  
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
               +     + + M RN   P+    N+LL+ L K   +  A +L  ++ ++G   D +
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467

Query: 595 TYNTIICGYC 604
           T N I+ G C
Sbjct: 468 TCNIIVDGLC 477



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 149/352 (42%), Gaps = 42/352 (11%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + L+ +  ++G+I E+ E+   M++ G  L       ++  L  S  + +  ++ + MR 
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494

Query: 176 KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
            G      L N  +  G+++++      +I+   +P+++T + +L  LC  G+   A +L
Sbjct: 495 HGSAALGNLGNSYI--GLVDDS------LIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F  ++    +P+ V ++  I+ FCK+ K+  AF++   M +      L  Y+ LI GL  
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
             ++ E + L+    ++G+  ++  +++ +        V  A    D M+     PNV S
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666

Query: 356 YSILIKGLCQ----------------------------------QGRLVEACGLFGQVLI 381
           +  LI+  C+                                   G+L++A  L   VL 
Sbjct: 667 FKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLD 726

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
           R  E     Y  L++  CK  +L     +   MI RG   D      +I+GL
Sbjct: 727 RGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 145/334 (43%), Gaps = 59/334 (17%)

Query: 99  NFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR- 152
           ++  L  DSL +  C      YS L+    + G+  E+  +FA M  MG  L PD V   
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM--MGEKLQPDSVAYN 563

Query: 153 -LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMH---RQV 204
             +        +   +++ + M  KG       Y  L+ GL   G+    F +H    ++
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL---GIKNQIFEIHGLMDEM 620

Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
            ++G  PNI T N  ++ LC   ++ +A++L D ++     PNV +F  LI AFCK    
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDF 680

Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
           + A +++   + +       +YS++ + L  AG+L +  ELL   LDRG +L        
Sbjct: 681 DMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL-------- 731

Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR-- 382
                                 G FL     Y  L++ LC++  L  A G+  +++ R  
Sbjct: 732 ----------------------GTFL-----YKDLVESLCKKDELEVASGILHKMIDRGY 764

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
             +P+ L    +IDG  K G  ++  S  D M++
Sbjct: 765 GFDPAALM--PVIDGLGKMGNKKEANSFADKMME 796


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 186/358 (51%), Gaps = 5/358 (1%)

Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
           +VT++TLI A+C+E  LE+AF++ N M +  L P L  Y+ +I+GL K GR      +L+
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
             L+ GL  D   +++++       +   A + +  ML  G +P+++S+S L+    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
            L +A   F  +    L P  + Y+ L+ G+C++G + +   + D M+++G   D +  +
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 428 LLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
            ++NGL     + DA + F + V    +P+ + F TL+ G C+    T  + LF  M   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
           NIKPD++ +  LI G    G +  A  L+  M+ R + P+ ITY  +I+      ++S  
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
             ++ +M   G+ P +   N ++    +  +   A +  G++  +G+ PD I+YNT+I
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 182/359 (50%), Gaps = 5/359 (1%)

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +VT N ++   C  G +  A  + + +   G KP++ T++ +IN  CK+ +  +A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M+ + L PD   Y+ L+    +     E  E+    L +G+  D+V FSS+M  +    
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
            + +A+  +  M   G +P+ + Y++L+ G C+ G ++EA  +  ++L +     ++ Y+
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM 447
           ++++G CK   L D   L+D M++RG  PD    + LI+G      M  AL  F    + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
            + P++  +NTL+DG C++       +L+  M    I P+ IT+ +LI    S G +S A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
             L+  M+++G+ P ++T + +I G  +  + S        M   GVAPD   YN L+N
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 173/327 (52%), Gaps = 5/327 (1%)

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           ++ Y+ LI    + G L+E  E++ +  D+GLK  +  ++++++     G   RA     
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            MLN G  P+  +Y+ L+   C++    EA  +FG++L + + P L+++SSL+  F ++ 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFN 457
            L      + +M K GL PD V+ ++L+     NG M +AL+   + +    + ++  +N
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
           T+++G C+ K  TD  KLF  M      PD  T T LI G    G+++ A+ LF  M +R
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAA 577
            + PD++ Y+ +I G  K   +     ++  M    + P+   Y +L+N      ++  A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 578 LKLFGQLTDRGLEPDIITYNTIICGYC 604
            +L+  + ++G++P ++T NT+I GYC
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYC 327



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 179/387 (46%), Gaps = 71/387 (18%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  Y R G ++E+ EI   M+D G  L P L                         
Sbjct: 4   YNTLIGAYCREGLLEEAFEIMNSMADKG--LKPSLF------------------------ 37

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  ++NGL +KG    A  +  +++  G  P+  T N +L   C       A  
Sbjct: 38  -----TYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKE 92

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           +F  +L  G  P++V+FS+L+  F +   L++A   +  M +  LVPD +IY++L+ G  
Sbjct: 93  IFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYC 152

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + G + E  ++    L++G  LDV+ ++++++       +  A + +D M+  G LP+  
Sbjct: 153 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 212

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR--------- 405
           +++ LI G CQ G + +A  LFG +  R ++P ++ Y++LIDGFCK G++          
Sbjct: 213 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 272

Query: 406 --------------------------DGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD- 436
                                     + F L+D MI++G+KP  V C+ +I G    GD 
Sbjct: 273 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 332

Query: 437 --ALRFFFQSVRMTLIPNLFIFNTLMD 461
             A  F  + +   + P+   +NTL++
Sbjct: 333 SKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 154/294 (52%), Gaps = 5/294 (1%)

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
           +V +++++ AY   G +  A +  + M + G  P++ +Y+ +I GLC++GR   A G+  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NG 432
           ++L   L P   TY++L+   C+     +   ++  M+++G+ PD V  S L+     N 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
            +  AL +F    +  L+P+  I+  LM G CR     + +K+   M       DVI + 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            ++ G+  +  L+ A  LF +M++RG  PD  T++ +IHG  +  N++  L +F  M + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            + PDI  YN L++   K   ++ A +L+  +  R + P+ ITY  +I  YCS+
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 294



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 146/277 (52%), Gaps = 10/277 (3%)

Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
           +++Y+ LI   C++G L EA  +   +  + L+PSL TY+++I+G CK G+      +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 413 NMIKRGLKPDAVVC-SLLINGLMGD----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
            M+  GL PD     +LL+     D    A   F + +R  ++P+L  F++LM    R +
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
                +  F  M  + + PD + +TVL+ G    G++  A+ +  +ML++G   DVI Y+
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            I++GL K K ++    +F  M   G  PD   +  L++   ++ N+  AL LFG +T R
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 588 GLEPDIITYNTIICGYCSLN-----SCLIDGYFKSQI 619
            ++PDI+ YNT+I G+C +      S L DG    +I
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 277


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 213/464 (45%), Gaps = 19/464 (4%)

Query: 168 KLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQ--RGFVPNIVTCNKILK 221
           +L R M  +G       Y   +    + G  + A  +  Q++    G  P++VT N  + 
Sbjct: 131 RLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIA 190

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
                G+   A  L + ++  G  PN++T+++ I A  K  + E+A  L   ++E    P
Sbjct: 191 ACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPP 250

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR-AVQT 340
               Y+ +ID   K GR  E  +LL   L   +  DV+ +SSV+ A  G G   + A+  
Sbjct: 251 STRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVI-AACGRGRRWKEAMDL 309

Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
            ++M   G  PNVISY+  I    +  R  EA  L  ++    L P++++Y+S       
Sbjct: 310 LEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAV 369

Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFI 455
           +G+  +   L   M  +G+ P+ +  +  ++     G    A++       +   P++  
Sbjct: 370 NGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIIS 429

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           FN+ +D C R ++    V+L   M    + P+VIT+   I           A+ LF +M 
Sbjct: 430 FNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMP 489

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            RGL+P+V+TY+++I    KG+   + + +   M   GVAPD+  YN  +    K    +
Sbjct: 490 TRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWE 549

Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            AL+L   +  RG +PDII+YN+ +       +C   G ++  +
Sbjct: 550 LALQLLKGMPTRGPKPDIISYNSAV------TACAKSGRWREAL 587



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 185/418 (44%), Gaps = 7/418 (1%)

Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
           G  + A  +  Q++ +G  PN++T N  +       +   A  L + ++  G  P+  T+
Sbjct: 196 GRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTY 255

Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
           + +I+A  K  +  +A  L   M+  D+  D+I YS +I    +  R KE  +LL     
Sbjct: 256 NPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRT 315

Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
           +G+  +V+ ++S +DA         A+     M   G +P VISY+         GR VE
Sbjct: 316 QGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVE 375

Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
           A  L  ++  + + P+ ++Y+S +D   K G+      L   M   G  PD +  +  I+
Sbjct: 376 ALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAID 435

Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
                     A+    +     L PN+  +N+ ++ C R  R  + + LF  M    + P
Sbjct: 436 ACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSP 495

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           +V+T+  +I   A       A+ L   M  RG+ PDVI+Y++ I    KG+   + L + 
Sbjct: 496 NVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLL 555

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII--CG 602
           K M   G  PDI  YN  +    K      AL L   +   GL P+ ++Y   I  CG
Sbjct: 556 KGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACG 613



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 181/413 (43%), Gaps = 32/413 (7%)

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
           + A  +  Q+  +G  PN+++ N  +       +   A  L   +  VG  P V+++++ 
Sbjct: 304 KEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSA 363

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
             A     +  +A +L   M    + P+ I Y+  +D   K G+ ++  +LL      G 
Sbjct: 364 TAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGS 423

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             D++ F+S +DA         AV+    M   G  PNVI+Y+  I+   +  R  EA G
Sbjct: 424 DPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMG 483

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
           LF ++  R L P+++TY+S+ID   K  +      L   M  RG+ PD            
Sbjct: 484 LFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPD------------ 531

Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
                             +  +N+ ++ C + ++    ++L   M     KPD+I++   
Sbjct: 532 ------------------VISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSA 573

Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
           +   A  G    A+ L   M   GLTP+ ++Y A IH   KG+   V + + K M+ +G 
Sbjct: 574 VTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGA 633

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY--CS 605
            P++  Y+  ++   K+     A+ L   L  +GL PD  TY T+I  +  CS
Sbjct: 634 TPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQRCS 686



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 171/379 (45%), Gaps = 11/379 (2%)

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
           +  D   + G   +  +++  I A     +   A +L   M    + PD++ Y+  I   
Sbjct: 96  AALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAAC 155

Query: 294 FKAGRLKEGNELL--LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            K GR KE  +LL  + A   G+  DVV ++S + A    G    A+   ++M+  G  P
Sbjct: 156 SKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPP 215

Query: 352 NVISYSILIKGLCQQGR-LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           N+I+Y+  I G C +GR   EA  L  +V+ +   PS  TY+ +ID   K G+  +   L
Sbjct: 216 NLITYNSAI-GACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDL 274

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
              M+   +  D +  S +I          +A+    Q     + PN+  +N+ +D C +
Sbjct: 275 LGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAK 334

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             R  + + L   M    + P VI++       A  G    A+ L  +M  +G+ P+ I+
Sbjct: 335 GDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTIS 394

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y++ +    KG      + + + M   G  PDI  +N  ++   +    + A++L  ++ 
Sbjct: 395 YNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMP 454

Query: 586 DRGLEPDIITYNTII--CG 602
             GL P++ITYN+ I  CG
Sbjct: 455 TAGLTPNVITYNSAIEACG 473



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 12/222 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC---- 170
           Y+  IE   R  +  E++ +F  M   G  LSP++V    + ++D+ + G+ ++L     
Sbjct: 465 YNSAIEACGRSARWQEAMGLFREMPTRG--LSPNVV--TYNSMIDACAKGEQWELAVQLL 520

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
             M  +G       Y   +    +    E A  + + +  RG  P+I++ N  +     +
Sbjct: 521 TGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKS 580

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G+   A  L   +  VG  PN V++   I+A  K  + + A ++   M      P+LI Y
Sbjct: 581 GRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITY 640

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           S  ID   K GR KE  +LL     +GL  D   + +V+ A+
Sbjct: 641 SAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAF 682


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 229/481 (47%), Gaps = 19/481 (3%)

Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----Y 181
           G+I +++ +   M+       P +   ++     S       ++  A+  KG  +     
Sbjct: 130 GRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNC 189

Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
             ++N +  +G ++    M R++   G   +IV+ N +LK LC   + G+   L D ++ 
Sbjct: 190 NLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVK 249

Query: 242 V----------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           V          G  P++  ++T+I+  CKE   E A ++ + M    L P+++ Y+ ++ 
Sbjct: 250 VHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLK 309

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           G+  A R ++  ELL     +   LD V F+ ++D +   G V R ++  ++ML  G +P
Sbjct: 310 GICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMP 369

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +VI+Y+ +I G C++G + EA  L   +     +P+ ++Y+ ++ G C + +  D   L 
Sbjct: 370 DVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELM 429

Query: 412 DNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             MI++G  P+ V  + +IN     GL+  A+    Q +     P+L  ++T++DG  + 
Sbjct: 430 SRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKA 489

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
            +  + ++L  +M    I P+VIT++ +   +A +G +   I +F  +    +  D + Y
Sbjct: 490 GKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLY 549

Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           +A+I  L K +   + +     M  NG  P+ + Y  L+  L  E  L  A  L  +L  
Sbjct: 550 NAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCS 609

Query: 587 R 587
           R
Sbjct: 610 R 610



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/548 (22%), Positives = 241/548 (43%), Gaps = 57/548 (10%)

Query: 95  GKTYNFFRLFRDSLGDFG--CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
           G+T +  R   D+ G+     DY+ ++  Y R+G+++ +                   +R
Sbjct: 66  GRTADAVRAL-DAAGNAAGVVDYNAMVAGYCRVGQVEAA-------------------RR 105

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKG---------------FCV-----YEFLMNGLLRKG 192
           L + +    +   Y+ + R + G+G                CV     Y  ++    R G
Sbjct: 106 LAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSG 165

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
              +A  +   +  +G   +   CN ++  +C  G +     +   L L G + ++V+++
Sbjct: 166 GYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYN 225

Query: 253 TLINAFCKEAK----------LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
            ++   C   +          + K  +  + M +    PD+ +Y+ +IDG+ K G  +  
Sbjct: 226 AVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVA 285

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
           NE+L      GLK +VV +++V+          +A +    M       + ++++IL+  
Sbjct: 286 NEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDF 345

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            CQ G +     L  Q+L     P ++TY+++I+GFCK G + +   L  NM   G KP+
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405

Query: 423 AVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            +  ++++ GL       DA     + ++   +PN   FNT+++  C+       ++L  
Sbjct: 406 TISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLK 465

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M +    PD+I+++ +I G+   G    A+ L   M+ +G+TP+VITYS++   L +  
Sbjct: 466 QMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREG 525

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
            I   + MF  ++   +  D  +YN +++ L K    D A+     +   G  P+  TY 
Sbjct: 526 RIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYT 585

Query: 598 TIICGYCS 605
            +I G  S
Sbjct: 586 ALIKGLAS 593



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 155/330 (46%), Gaps = 8/330 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ +I+   + G  + + EI + M   G  L P++V    ++  +  ++   +  +L   
Sbjct: 269 YATIIDGICKEGHHEVANEILSRMPSYG--LKPNVVCYNTVLKGICSADRWEKAEELLTE 326

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           M  K        +  L++   + G+++    +  Q+++ G +P+++T   ++   C  G 
Sbjct: 327 MYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGL 386

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A  L   +   G KPN ++++ ++   C   +   A +L + M++   +P+ + ++ 
Sbjct: 387 IDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNT 446

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +I+ L K G +++  ELL   L  G   D++ +S+V+D     G    A++  + M+N G
Sbjct: 447 IINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 506

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PNVI+YS +   L ++GR+ +   +F  +    +    + Y+++I   CK  +     
Sbjct: 507 ITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAI 566

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDAL 438
                M+  G  P+    + LI GL  + L
Sbjct: 567 DFLAYMVSNGCMPNESTYTALIKGLASEGL 596



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 37/308 (12%)

Query: 81  DVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIF 135
           DV  ++      Q G       L    L + GC      Y+ +I  + + G IDE+V   
Sbjct: 336 DVTFNILVDFFCQNGLVDRVIELLEQML-EHGCMPDVITYTTVINGFCKEGLIDEAVM-- 392

Query: 136 AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIE 195
                        L++ + SC    N++                 Y  ++ GL       
Sbjct: 393 -------------LLKNMPSCGCKPNTIS----------------YTIVLKGLCSTERWV 423

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
           +A  +  ++IQ+G +PN VT N I+  LC  G +  A  L   +L+ G  P+++++ST+I
Sbjct: 424 DAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVI 483

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
           +   K  K E+A +L N+M+   + P++I YS +   L + GR+ +  ++     D  ++
Sbjct: 484 DGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIR 543

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            D V++++V+ +     +   A+     M++ G +PN  +Y+ LIKGL  +G L EA  L
Sbjct: 544 SDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDL 603

Query: 376 FGQVLIRR 383
             ++  RR
Sbjct: 604 LSELCSRR 611


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 197/390 (50%), Gaps = 20/390 (5%)

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
           L G K N   F  LI AF +   +++A ++Y   +++   P +   + L++GL K     
Sbjct: 112 LRGSKFNPSVFGVLIIAFSEVGLVDEALRVY---LKVGAFPAVQACNALLNGLLKKSSFD 168

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
              EL    + R L   VV ++ ++DA    GDV RA      M+  G  P V+ Y+ LI
Sbjct: 169 IMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLI 228

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            GLC + +L+EA  +F Q+    + P+L TY+ L+DG+CK+  ++    LY  M+  GL+
Sbjct: 229 HGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQ 288

Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           P+ V   +LI+ L     +  A RFF Q  +  ++PN+ +FN+L+DG  +    ++   L
Sbjct: 289 PNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDL 348

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
            + M  + I PDV T+++LI+     G++  A  +  +M K G+  + + Y+++I G  K
Sbjct: 349 LLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCK 408

Query: 536 GKNISVGLHMFKL------MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
             N+   L +FK       M RNG+ PD   Y V+L   +   ++   + L   +   G+
Sbjct: 409 EGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGI 468

Query: 590 EPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
            P+ +T   +  GY        +GY KS +
Sbjct: 469 VPNEVTSQVVRRGYQD------NGYLKSAL 492



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 167/336 (49%), Gaps = 11/336 (3%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           L+NGLL+K   +  + ++  ++ R   P +VT N ++   C  G +  A SL   ++  G
Sbjct: 157 LLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKG 216

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
            +P VV ++TLI+  C E+KL +A  ++  M +  + P+L  Y++L+DG  K   +K+  
Sbjct: 217 IEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQAL 276

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            L    LD GL+ +VV F  ++DA   + ++  A + + +M   G +PNV+ ++ LI G 
Sbjct: 277 HLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGY 336

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
            + G   EA  L  ++   ++ P + TYS LI   C+ G + +   +   M K G+  ++
Sbjct: 337 SKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANS 396

Query: 424 VVCSLLINGLMGD-----------ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
           VV + LI+G   +           A +FF    R  L P+   +  ++ G    K   D 
Sbjct: 397 VVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADV 456

Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           + L   M    I P+ +T  V+ RG    G L SA+
Sbjct: 457 MMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSAL 492



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 201/417 (48%), Gaps = 21/417 (5%)

Query: 134 IFAYMSDMGIY-----LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF--CVYEFLMN 186
           +  Y++   +Y     L+ DL+Q L+            +     +RG  F   V+  L+ 
Sbjct: 68  VIHYLTGAKVYPTARCLTKDLIQTLLQSCTPRRVNSLVFNALSQLRGSKFNPSVFGVLII 127

Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKP 246
                G+++ A  ++ +V   G  P +  CN +L  L           L++ ++     P
Sbjct: 128 AFSEVGLVDEALRVYLKV---GAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFP 184

Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL 306
            VVT++ L++A C++  + +A  L + M++  + P ++IY+ LI GL    +L E   + 
Sbjct: 185 TVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMF 244

Query: 307 LTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ 366
               D G+  ++  ++ +MD Y    +V +A+  Y  ML+ G  PNV+++ ILI  LC+ 
Sbjct: 245 RQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKV 304

Query: 367 GRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVC 426
             L+ A   F Q+    + P+++ ++SLIDG+ K+G   +   L   M K  + PD    
Sbjct: 305 RELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTY 364

Query: 427 SLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR---LKRATD---TVKL 475
           S+LI      G + +A     +  +  +  N  ++N+L+DG C+   +++A +     K 
Sbjct: 365 SILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKF 424

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           F  M    ++PD + + V+++G  +   ++  ++L   M+K G+ P+ +T   +  G
Sbjct: 425 FSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRG 481



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 167/323 (51%), Gaps = 10/323 (3%)

Query: 289 LIDGLFKAGRLKEGNELLLTALD--RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           LI  L ++   +  N L+  AL   RG K +  VF  ++ A+  +G V  A++ Y   L 
Sbjct: 88  LIQTLLQSCTPRRVNSLVFNALSQLRGSKFNPSVFGVLIIAFSEVGLVDEALRVY---LK 144

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
            G  P V + + L+ GL ++        L+  ++ RRL P+++TY+ L+D  C+ G +  
Sbjct: 145 VGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLR 204

Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
             SL   M+K+G++P  V+ + LI+GL     + +A   F Q     + PNL+ +N LMD
Sbjct: 205 AKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMD 264

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
           G C+       + L+  M    ++P+V+T  +LI  +     L +A   F QM K G+ P
Sbjct: 265 GYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVP 324

Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
           +V+ ++++I G  K  N S    +   ME+  ++PD+  Y++L+    +   ++ A  + 
Sbjct: 325 NVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDIL 384

Query: 582 GQLTDRGLEPDIITYNTIICGYC 604
            ++   G+  + + YN++I GYC
Sbjct: 385 KRMEKEGVPANSVVYNSLIDGYC 407



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 200/431 (46%), Gaps = 39/431 (9%)

Query: 46  NNPTPAIQFFKWTHNCVSSPNI--------AQLIHVLLQS-DMRDVASHVFDKMVIQFGK 96
           NNPT  +  +    + ++   +          LI  LLQS   R V S VF+ +    G 
Sbjct: 56  NNPTKKLHLYSAVIHYLTGAKVYPTARCLTKDLIQTLLQSCTPRRVNSLVFNALSQLRGS 115

Query: 97  TYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
            +N               +  LI  +  +G +DE++ ++     +G + +      L++ 
Sbjct: 116 KFN------------PSVFGVLIIAFSEVGLVDEALRVYL---KVGAFPAVQACNALLNG 160

Query: 157 LVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           L+  +S    ++L   M  +        Y  L++   R+G +  A  +  +++++G  P 
Sbjct: 161 LLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPT 220

Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
           +V    ++  LC   ++  A S+F  +   G  PN+ T++ L++ +CK A +++A  LY 
Sbjct: 221 VVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQ 280

Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
            M++  L P+++ + ILID L K   L       +     G+  +VVVF+S++D Y   G
Sbjct: 281 GMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAG 340

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           +   A      M      P+V +YSILIK  C+ G + EA  +  ++    +  + + Y+
Sbjct: 341 NCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYN 400

Query: 393 SLIDGFCKSGKLRDGFSL------YDNMIKRGLKPDAVVCSLLING-----LMGDALRFF 441
           SLIDG+CK G +     +      + +M + GL+PDA+  ++++ G      M D +   
Sbjct: 401 SLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLH 460

Query: 442 FQSVRMTLIPN 452
              ++M ++PN
Sbjct: 461 ADMIKMGIVPN 471



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 10/128 (7%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA-- 172
           YS LI+N  R+G ++E+ +I   M   G+  +  +   L+       ++ +  ++ +A  
Sbjct: 364 YSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATK 423

Query: 173 ----MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
               MR  G       Y  ++ G L    + +   +H  +I+ G VPN VT   + +   
Sbjct: 424 FFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQ 483

Query: 225 INGQIGNA 232
            NG + +A
Sbjct: 484 DNGYLKSA 491


>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 376

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 187/354 (52%), Gaps = 6/354 (1%)

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C+   ++ A ++Y  ++E  + PD ++Y+ +++G F+  ++K+  EL       G +  V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
             F+ +M      G V   +  ++ M   GF+ + I+Y IL+ G C+ G + ++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG--- 435
              +        YS++I+G CK   L    S+ + MIK G KP+A V + LINGL+G   
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 436 --DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             DA+R F +   M   PN+  +NTL++G C+ +   +   L   +    + P VIT+++
Sbjct: 180 FEDAIRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSM 239

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L++G+     +  A+ L+ Q+  +G  PDV  ++ +IHGL     + + L ++  M R  
Sbjct: 240 LMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLYFDMNRWK 299

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            AP++  +N L+    K+ ++  AL ++ ++   GLEPDII+YN  + G CS N
Sbjct: 300 CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCN 353



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 182/360 (50%), Gaps = 14/360 (3%)

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING--QIGNASSLFDVLLLVGPKPN 247
             G I+ A  +++++++    P+ V  N +L     NG  ++      F++  ++G + N
Sbjct: 2   ESGDIDGAERVYKEIVESKVSPDAVVYNAML-----NGYFRVAKIKDCFELWEMMGSEGN 56

Query: 248 --VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
             V +F+ ++       K+++   ++ LM +   V D I Y IL+ G  K G + +   +
Sbjct: 57  RSVSSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHV 116

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L  A  +G  LD   +S++++      ++ RAV   + M+  G  PN   Y+ LI GL  
Sbjct: 117 LEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVG 176

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
             +  +A  +F ++      P+++TY++LI+G CK+    + ++L   ++ +GL P  + 
Sbjct: 177 ASKFEDAIRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVIT 236

Query: 426 CSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
            S+L+ GL  D     AL+ + Q       P++ + N L+ G C + +    + L+  M 
Sbjct: 237 YSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLYFDMN 296

Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
            +   P++++H  L+ G    G + +A++++ ++L+ GL PD+I+Y+  + GL     IS
Sbjct: 297 RWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRIS 356



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 176/345 (51%), Gaps = 10/345 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++  Y R+ KI +  E++  M   G   S      +M  L D+  V +   +   M+
Sbjct: 28  YNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVISIWELMK 86

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF      Y  L++G  + G I+ + H+     Q+G V +    + ++  LC    + 
Sbjct: 87  KSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLD 146

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+ + ++  G KPN   ++TLIN     +K E A +++  M  M   P++I Y+ LI
Sbjct: 147 RAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNTLI 206

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K     E   L+   LD+GL   V+ +S +M        V +A+Q ++++ + GF 
Sbjct: 207 NGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFK 266

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V  +++LI GLC  G++  A  L+  +   +  P+L+++++L++GF K G +R+   +
Sbjct: 267 PDVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVI 326

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI 450
           +  +++ GL+PD +  ++ + GL     + DA+ F   +V   ++
Sbjct: 327 WARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 176/351 (50%), Gaps = 6/351 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  ++NG  R   I++ F +   +   G   ++ + N +++ L  NG++    S+++++
Sbjct: 27  VYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGLFDNGKVDEVISIWELM 85

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G   + +T+  L++ FCK   ++K+  +  +  +   V D   YS +I+GL K   L
Sbjct: 86  KKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 145

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                +L   +  G K +  V++++++  VG      A++ +  M      PN+I+Y+ L
Sbjct: 146 DRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNTL 205

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+     EA  L  ++L + L P ++TYS L+ G C   K+     L++ +  +G 
Sbjct: 206 INGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGF 265

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KPD  + ++LI+GL     M  AL  +F   R    PNL   NTLM+G  +     + + 
Sbjct: 266 KPDVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALV 325

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           ++  +    ++PD+I++ + ++G+ S   +S AIL     + + +    IT
Sbjct: 326 IWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 8/208 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LI   V   K ++++ +F  M  M  + SP+++    L++ L  +   G+ Y L + 
Sbjct: 167 YNTLINGLVGASKFEDAIRVFREMGTM--HCSPNIITYNTLINGLCKNEMFGEAYNLVKE 224

Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  KG       Y  LM GL     +E A  +  QV  +GF P++   N ++  LC  G+
Sbjct: 225 LLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGK 284

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A SL+  +      PN+V+ +TL+  F K+  +  A  ++  ++   L PD+I Y+I
Sbjct: 285 MQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNI 344

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKL 316
            + GL    R+ +    L  A+ + + L
Sbjct: 345 TLKGLCSCNRISDAILFLHDAVTKKIVL 372


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 243/501 (48%), Gaps = 18/501 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVGQ---YYKLCRA 172
           L++ Y +    +E++ +F  M  +    SP +     L++  V+S+   +   ++K   A
Sbjct: 83  LLKAYAKTRMPNEALHVFQTMPHV-FGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141

Query: 173 MR-GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
            R       Y  LM  + +KG  E    +   +   G  P+ +T   ++  +  +G +G 
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGF 201

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV-PDLIIYSILI 290
           A  +FD +   G +P+VV ++ +I+ F K     KA +++  ++  +LV P ++ Y+++I
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMI 261

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K GR  EG E+         K D+  +S+++      GD+G A + Y+ M+  G  
Sbjct: 262 SGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVR 321

Query: 351 PNVISYSILIKGLCQQGRLVEACGLF---GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           P+V++ + ++ GLC+ G + E   L+   G+  +R +     +Y+  + G  ++GK+ D 
Sbjct: 322 PDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVR----SYNIFLKGLFENGKVDDA 377

Query: 408 FSLYDNMIKRGLKPDAVVC-SLLINGLMGDALRFFFQSVRMT--LIPNLFIFNTLMDGCC 464
             L+D +++       VV   L  NG +  AL+   ++      +  + F +++L++  C
Sbjct: 378 MMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALC 437

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           +  R  +   +  LM     K +     VLI G      L SA+ +F +M  +G +  V+
Sbjct: 438 KEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVV 497

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           +Y+ +I+GL + +           M   G  PDI  Y+ L+  L +   +DAAL+L+ Q 
Sbjct: 498 SYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQF 557

Query: 585 TDRGLEPDIITYNTIICGYCS 605
            D G +PDII YN +I   CS
Sbjct: 558 LDTGHKPDIIMYNIVIHRLCS 578



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 147/608 (24%), Positives = 280/608 (46%), Gaps = 45/608 (7%)

Query: 38  ILANLIKTNNPTPAIQFFK-WTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGK 96
           +L    KT  P  A+  F+   H    SP I    + LL +    V SH       Q+ +
Sbjct: 83  LLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSF-NTLLNAF---VESH-------QWAR 131

Query: 97  TYNFFRLFRDSLGDFGCD-YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RL 153
             NFF+ F  +      + Y+ L++   + G+ ++   +  +M   G  +SPD +    L
Sbjct: 132 AENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAG--MSPDRITYGTL 189

Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
           +  +  S  +G   ++   MR +G       Y  +++G  ++G    A  M  ++++   
Sbjct: 190 IGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREEL 249

Query: 210 V-PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           V P++V+ N ++  LC  G+      +++ +     K ++ T+S LI+   +   L  A 
Sbjct: 250 VFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGAR 309

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
           ++Y  M+   + PD++  + +++GL KAG ++E  EL        L+ +V  ++  +   
Sbjct: 310 KVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKGL 368

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR--LEP 386
              G V  A+  +D +L      +  +Y +++ GLC  G +  A  +  +   R   ++ 
Sbjct: 369 FENGKVDDAMMLWDGLLEA----DSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDV 424

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
               YSSLI+  CK G+L +   + + M KRG K ++ VC++LI+G      +  A++ F
Sbjct: 425 DEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVF 484

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            +         +  +N L++G  R +R  +       M     KPD+IT++ LI G+   
Sbjct: 485 REMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYES 544

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
             + +A+ L+ Q L  G  PD+I Y+ +IH L     +   L ++  + R     ++  +
Sbjct: 545 NMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTL-RQKKCVNLVTH 603

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS----------LNSCLI 611
           N ++    K  N + A K++  + +  L+PDII+YN  + G CS          L+  L+
Sbjct: 604 NTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALV 663

Query: 612 DGYFKSQI 619
            G+  + I
Sbjct: 664 RGFLPTAI 671



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 207/430 (48%), Gaps = 17/430 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ +I    + G+  E +EI+  M              L+  L ++  +G   K+   M 
Sbjct: 257 YNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMV 316

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           G+G          ++NGL + G +E  F +  + + +  + N+ + N  LK L  NG++ 
Sbjct: 317 GRGVRPDVVTCNAMLNGLCKAGNVEECFELWEE-MGKCSLRNVRSYNIFLKGLFENGKVD 375

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM--MEMDLVPDLIIYSI 288
           +A  L+D LL    + +  T+  +++  C    + +A Q+       E  +  D   YS 
Sbjct: 376 DAMMLWDGLL----EADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSS 431

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI+ L K GRL E + ++     RG K +  V + ++D +V    +  AV+ +  M   G
Sbjct: 432 LINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKG 491

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
               V+SY+ILI GL +  R  EA     ++L +  +P ++TYS+LI G  +S  +    
Sbjct: 492 CSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAAL 551

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+   +  G KPD ++ +++I+     G + DAL+ +  ++R     NL   NT+M+G 
Sbjct: 552 RLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLY-STLRQKKCVNLVTHNTIMEGF 610

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
            ++       K++  +    ++PD+I++ + ++G+ S G ++ A+      L RG  P  
Sbjct: 611 YKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTA 670

Query: 524 ITYSAIIHGL 533
           IT++ ++  +
Sbjct: 671 ITWNILVRAV 680



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 128/255 (50%), Gaps = 1/255 (0%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+N L ++G ++ A  +   + +RG   N   CN ++     + ++ +A  +F  +
Sbjct: 428 AYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREM 487

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G    VV+++ LIN   +  +  +A+   N M+E    PD+I YS LI GL+++  +
Sbjct: 488 SGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMM 547

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                L    LD G K D+++++ V+      G V  A+Q Y  +     + N+++++ +
Sbjct: 548 DAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTI 606

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           ++G  + G    A  ++  +L   L+P +++Y+  + G C  G++ D     D+ + RG 
Sbjct: 607 MEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGF 666

Query: 420 KPDAVVCSLLINGLM 434
            P A+  ++L+  ++
Sbjct: 667 LPTAITWNILVRAVI 681


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 208/421 (49%), Gaps = 1/421 (0%)

Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
           Y  +++ L +KG +  A  +   +   G  PN  T N ++   C  G +  A+ + D++ 
Sbjct: 86  YNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMA 145

Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
                P+V T++TLI   CK+ K+++AF+L + M  + L+P ++ Y++LI+G F+     
Sbjct: 146 RNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSL 205

Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
           +G EL+     +G+K + V ++ V+  YV  G +  A     +M   GF P+ ++++ L 
Sbjct: 206 KGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLS 265

Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
            G C+ GRL EA  +  ++  + L+ + +T ++++   C   KL D + L  +  KRG  
Sbjct: 266 NGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF 325

Query: 421 PDAVVCSLLINGLMGDALRFFFQSVR-MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
            D V    LI G         +  ++   +IP++  + T++ G CR  +   ++     +
Sbjct: 326 VDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNEL 385

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
               + PD  T+  +I G   +G +  A     +M+K+   PD+ T + ++ GL     +
Sbjct: 386 LESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGML 445

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
              L +FK     G A D   +N +++ L +E   + A  L  ++ ++ L PD  T+N I
Sbjct: 446 DKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAI 505

Query: 600 I 600
           +
Sbjct: 506 L 506



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 197/403 (48%), Gaps = 14/403 (3%)

Query: 211 PNIVTCNKILK---RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           PN++T N ++K   R      +  + ++F  ++ +G + N  TF+ LI   C E KL +A
Sbjct: 8   PNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEA 67

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
             L   M      PD + Y+ ++D L K G+L E  +LLL   + GL  +   F+ ++  
Sbjct: 68  IGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSG 127

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y  +G +  A +  D M     LP+V +Y+ LI GLC+ G++ EA  L  ++   +L P 
Sbjct: 128 YCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPH 187

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFF 442
           ++TY+ LI+G  +      GF L D M  +G+KP+AV  ++++      G M +A     
Sbjct: 188 VVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 247

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           +       P+   FNTL +G C+  R ++  ++   M    +K + +T   ++  +  + 
Sbjct: 248 KMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGER 307

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIY 561
            L  A  L     KRG   D ++Y  +I G FK GK+       +  M+   + P I  Y
Sbjct: 308 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSX-----XWDEMKEKEIIPSIITY 362

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             ++  L +    D ++    +L + GL PD  TYNTII GYC
Sbjct: 363 GTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYC 405



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 196/438 (44%), Gaps = 36/438 (8%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           VI+ G   N  T N ++   CI  ++  A  L   +      P+ V+++T+++  CK+ K
Sbjct: 39  VIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGK 98

Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
           L +A  L   M    L P+   ++IL+ G  K G LKE  E++       +  DV  +++
Sbjct: 99  LNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTT 158

Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
           ++      G +  A +  D M N   LP+V++Y++LI G  +    ++   L  ++  + 
Sbjct: 159 LIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKG 218

Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDAL 438
           ++P+ +TY+ ++  + K GK+ +  +    M + G  PD V  + L NG      + +A 
Sbjct: 219 VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAF 278

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF-----------------MLMGM 481
           R   +  R  L  N    NT++   C  ++  D  KL                  ++MG 
Sbjct: 279 RMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGY 338

Query: 482 YNIK--------------PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
           + +               P +IT+  +I G+   G    +I    ++L+ GL PD  TY+
Sbjct: 339 FKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYN 398

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
            II G  +   +    H    M +    PD+   N+L+  L  E  LD ALKLF     +
Sbjct: 399 TIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISK 458

Query: 588 GLEPDIITYNTIICGYCS 605
           G   D +T+NTII G C 
Sbjct: 459 GKAIDAVTFNTIISGLCE 476



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/484 (23%), Positives = 205/484 (42%), Gaps = 63/484 (13%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI    + GKIDE+  +   M ++   L P +V                        
Sbjct: 156 YTTLIGGLCKDGKIDEAFRLRDEMENL--KLLPHVV------------------------ 189

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 Y  L+NG          F +  ++  +G  PN VT N ++K     G++ NA +
Sbjct: 190 -----TYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGN 244

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
               +   G  P+ VTF+TL N +CK  +L +AF++ + M    L  + +  + ++  L 
Sbjct: 245 ELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 304

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
              +L +  +LL +A  RG  +D V + +++  Y  +G        +D M     +P++I
Sbjct: 305 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVG----KSXXWDEMKEKEIIPSII 360

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y  +I GLC+ G+  ++     ++L   L P   TY+++I G+C+ G++   F   + M
Sbjct: 361 TYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKM 420

Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
           +K+  KPD   C++L+ GL     +  AL+ F   +      +   FNT++ G C   R 
Sbjct: 421 VKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRF 480

Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG----------- 518
            +   L   M    + PD  TH  ++  +A  G +  A      ++++G           
Sbjct: 481 EEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNK 540

Query: 519 ------------LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
                         P+ + +S  I+ L         +HM +   + G+    + Y  L+ 
Sbjct: 541 RKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLME 600

Query: 567 MLIK 570
            LIK
Sbjct: 601 GLIK 604



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 10/202 (4%)

Query: 414 MIKRGLKPDAVVCSLLINGLMGDALR--------FFFQSVRMTLIPNLFIFNTLMDGCCR 465
           M +  LKP+ +  + LI  L+    +         F   +++ +  N   FN L+ GCC 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
             + ++ + L   M  ++  PD +++  ++  +  +G L+ A  L   M   GL P+  T
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           ++ ++ G  K   +     +  +M RN V PD+  Y  L+  L K+  +D A +L  ++ 
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 586 DRGLEPDIITYNTII--CGYCS 605
           +  L P ++TYN +I  C  CS
Sbjct: 181 NLKLLPHVVTYNMLINGCFECS 202


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 227/468 (48%), Gaps = 72/468 (15%)

Query: 65  PNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVR 124
           P    LI V++    ++ AS VF  ++   G   +   +F           S LI  Y+ 
Sbjct: 34  PEAKNLIQVVVSRKGKNSASAVFAAILETQGTQRSDIYVF-----------SGLITAYLE 82

Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFL 184
            G + +++E +    +   ++  D  ++++  L+      +Y+KL          V+ F 
Sbjct: 83  SGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL----KYFKL----------VWXF- 127

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
                           ++++++ G+  ++   N ++ R C  G I  A S+FD +   G 
Sbjct: 128 ----------------YKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGL 171

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +P+VV+F+TL+N + +   L++ F+L + M    + PD+  YS+LI+GL K  ++ + NE
Sbjct: 172 RPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANE 231

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
           L    LD+GL  + V F++++D +   G V  A++ Y +ML+    P++I+Y+ LI GLC
Sbjct: 232 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLC 291

Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
           ++G L +A  L  ++ ++ L+P  ++Y++LIDG CK G L   F     MI+  ++ D V
Sbjct: 292 KKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDV 351

Query: 425 VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
             + LI+GL                              C+  R+ D  K+   M    +
Sbjct: 352 AYTALISGL------------------------------CQEGRSIDAEKMLREMLSVGL 381

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           +PD  T+T++I     +G + +   L  +M + G  P V+TY+ +++G
Sbjct: 382 RPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 183/387 (47%), Gaps = 30/387 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  L+   L  G + +A   +R   +  F     TC K+L+ L            +  +
Sbjct: 72  VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEI 131

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   ++  F+ L++ FCKE  +  A  +++ + +  L P ++ ++ L++G  + G L
Sbjct: 132 LECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDL 191

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            EG  L       G++ DV  +S +++       +  A + +D ML+ G +PN ++++ L
Sbjct: 192 DEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTL 251

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+ GR+  A  ++ Q+L + L P L+TY++LI G CK G L+    L D M  +GL
Sbjct: 252 IDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGL 311

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           KPD +                               + TL+DGCC+        +    M
Sbjct: 312 KPDKIS------------------------------YTTLIDGCCKEGDLETAFEHRKRM 341

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              NI+ D + +T LI G+  +G    A  +  +ML  GL PD  TY+ II+   K  ++
Sbjct: 342 IQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDV 401

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLN 566
             G  + K M+R+G  P +  YNVL+N
Sbjct: 402 WTGSKLLKEMQRDGHVPSVVTYNVLMN 428



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 188/383 (49%), Gaps = 15/383 (3%)

Query: 231 NASSLFDVLLLV--GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +AS++F  +L      + ++  FS LI A+ +   L  A + Y L  E            
Sbjct: 51  SASAVFAAILETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRK 110

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +++ L K    K         L+ G    +  F+ +M  +   GD+  A+  +D +   G
Sbjct: 111 VLEHLMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWG 170

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V+S++ L+ G  + G L E   L   +    ++P + TYS LI+G CK  K+ D  
Sbjct: 171 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 230

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+D M+ +GL P+ V  + LI     NG +  A+  + Q +  +L P+L  +NTL+ G 
Sbjct: 231 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGL 290

Query: 464 CR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
           C+   LK+A D   L   M M  +KPD I++T LI G   +G L +A     +M++  + 
Sbjct: 291 CKKGDLKQAQD---LIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIR 347

Query: 521 PDVITYSAIIHGLFK-GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
            D + Y+A+I GL + G++I     M + M   G+ PD   Y +++N   K+ ++    K
Sbjct: 348 LDDVAYTALISGLCQEGRSIDAE-KMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSK 406

Query: 580 LFGQLTDRGLEPDIITYNTIICG 602
           L  ++   G  P ++TYN ++ G
Sbjct: 407 LLKEMQRDGHVPSVVTYNVLMNG 429



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 161/328 (49%), Gaps = 5/328 (1%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+ ++S LI    ++G L++  E      +    +       V++  + +         Y
Sbjct: 69  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFY 128

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             +L  G+  ++  ++IL+   C++G +  A  +F  +    L PS++++++L++G+ + 
Sbjct: 129 KEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRL 188

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L +GF L   M   G++PD    S+LINGL     M DA   F + +   L+PN   F
Sbjct: 189 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 248

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  R    ++++  M   ++ PD+IT+  LI G+  +G L  A  L  +M  
Sbjct: 249 TTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRM 308

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL PD I+Y+ +I G  K  ++       K M +  +  D   Y  L++ L +E     
Sbjct: 309 KGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSID 368

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+  ++   GL PD  TY  II  +C
Sbjct: 369 AEKMLREMLSVGLRPDTGTYTMIINEFC 396



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 54/122 (44%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           + D+   + LI      G L  AI  +    +        T   ++  L K K   +   
Sbjct: 67  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWX 126

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +K +   G    +  +N+L++   KE ++  AL +F  +T  GL P ++++NT++ GY 
Sbjct: 127 FYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYI 186

Query: 605 SL 606
            L
Sbjct: 187 RL 188


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 242/496 (48%), Gaps = 21/496 (4%)

Query: 107 SLGDFG---CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSN 161
           SLGD     C  +  I     + K      +   M+ +G  L P LV    +++ L    
Sbjct: 102 SLGDGSADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIG--LEPTLVTLNTIVNGLCIEG 159

Query: 162 SVGQYYKLCRAMRGKGF-C---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
            V     L   M   G+ C    Y  L+NGL + G    A    +++++R   PN+V  N
Sbjct: 160 DVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYN 219

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE-AKLEKAFQLYNLMM- 275
            IL  LC  G +G A  L   + +V  +PNVVT++ LI   C E     +   L+N M+ 
Sbjct: 220 AILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVA 279

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
           E  +VPD+  +SIL+DG  K G L     ++   +  G++ +VV ++S++  Y     + 
Sbjct: 280 EKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQME 339

Query: 336 RAVQTYDRML--NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
            A++ +  M+    G LP+V++++ LI G C+   + +A  L  +++ + L+P + T++S
Sbjct: 340 EAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTS 399

Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMT 448
           LI GFC+  K      L+  M + G  P+   C+++++GL+      +A+  F   ++  
Sbjct: 400 LIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSG 459

Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
           L  ++ I+N ++DG C++ +  D  KL   + +  +K D  T+ ++I+G+  +G L  A 
Sbjct: 460 LDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAE 519

Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
            L  +M + G  P+  +Y+  + GL +  +I+      ++M+  G   D     +L+  L
Sbjct: 520 ELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFL 579

Query: 569 IKECNLDAALKLFGQL 584
                 D + K F Q+
Sbjct: 580 SAN-EEDKSFKEFPQI 594



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 204/402 (50%), Gaps = 9/402 (2%)

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLY 271
           ++ T N  +  LC   +     ++  ++  +G +P +VT +T++N  C E  +  A  L 
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 272 NLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGI 331
             M  +    +   Y  L++GL K G      E L   + R L  +VVV+++++D     
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKR 228

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ-GRLVEACGLFGQVLIRR-LEPSLL 389
           G VG A+     M      PNV++Y+ LI+GLC + G   E  GLF +++  + + P + 
Sbjct: 229 GLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQ 288

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           T+S L+DGFCK G L    S+   M++ G++P+ V  + LI G      M +A+R F   
Sbjct: 289 TFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLM 348

Query: 445 VRMT--LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
           VR     +P++   N+L+ G C++K     + L   M    + PDV T T LI G     
Sbjct: 349 VREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVK 408

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
              +A  LFF M + G  P++ T + ++ GL K    S  + +F+ M ++G+  DI IYN
Sbjct: 409 KPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYN 468

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           ++L+ + K   L+ A KL   +  +GL+ D  TYN +I G C
Sbjct: 469 IMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLC 510



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 212/417 (50%), Gaps = 13/417 (3%)

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFC 259
           HR +    F P I   N +   +  +     A SL  +L  +G    +V T +  IN  C
Sbjct: 63  HRMLTLTPF-PCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLC 121

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVV 319
              K    F +  LM ++ L P L+  + +++GL   G +     L+    + G   +  
Sbjct: 122 HMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNAR 181

Query: 320 VFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
            + ++++    IGD   A++   +M+     PNV+ Y+ ++ GLC++G + EA GL  ++
Sbjct: 182 TYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEM 241

Query: 380 LIRRLEPSLLTYSSLIDGFCKS-GKLRDGFSLYDNMI-KRGLKPDAVVCSLLINGLMGDA 437
            +  +EP+++TY+ LI G C   G  R+G  L++ M+ ++G+ PD    S+L++G   + 
Sbjct: 242 GVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEG 301

Query: 438 LRFFFQSV-----RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM--GMYNIKPDVIT 490
           L    +SV     R+ + PN+  +N+L+ G C   +  + +++F LM        P V+T
Sbjct: 302 LLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVT 361

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           H  LI G      +  A+ L  +M+ +GL PDV T++++I G  + K       +F  M+
Sbjct: 362 HNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMK 421

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDA-ALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
            +G  P++    V+L+ L+K C LD+ A+ LF  +   GL+ DI+ YN ++ G C +
Sbjct: 422 EHGQVPNLQTCAVVLDGLLK-CWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKM 477



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 207/404 (51%), Gaps = 9/404 (2%)

Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
           G  P +VT N I+  LCI G + +A  L + +  +G   N  T+  L+N  CK      A
Sbjct: 140 GLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGA 199

Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
            +    M++ +L P++++Y+ ++DGL K G + E   LL       ++ +VV ++ ++  
Sbjct: 200 LECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQG 259

Query: 328 YVG-IGDVGRAVQTYDRML-NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
             G  G     V  ++ M+   G +P+V ++SIL+ G C++G L+ A  + G ++   +E
Sbjct: 260 LCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVE 319

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK--PDAVVCSLLINGL-----MGDAL 438
           P+++TY+SLI G+C   ++ +   ++  M++ G    P  V  + LI+G      +  A+
Sbjct: 320 PNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAM 379

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
               + V   L P++F + +L+ G C +K+     +LF  M  +   P++ T  V++ G+
Sbjct: 380 SLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGL 439

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
                 S A+ LF  M+K GL  D++ Y+ ++ G+ K   ++    +   +   G+  D 
Sbjct: 440 LKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDS 499

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
             YN+++  L +E  LD A +L  ++ + G  P+  +YN  + G
Sbjct: 500 YTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQG 543



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 212/430 (49%), Gaps = 17/430 (3%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++NGL  +G + +A  +  ++   G+  N  T   ++  LC  G    A      ++   
Sbjct: 151 IVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRN 210

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF-KAGRLKEG 302
             PNVV ++ +++  CK   + +A  L + M  +++ P+++ Y+ LI GL  + G  +EG
Sbjct: 211 LGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREG 270

Query: 303 ----NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
               NE++    ++G+  DV  FS ++D +   G + RA      M+  G  PNV++Y+ 
Sbjct: 271 VGLFNEMVA---EKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNS 327

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLE---PSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           LI G C + ++ EA  +FG +++R  E   PS++T++SLI G+CK  ++    SL   M+
Sbjct: 328 LIAGYCLRSQMEEAMRVFG-LMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMV 386

Query: 416 KRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            +GL PD    + LI G         A   FF       +PNL     ++DG  +    +
Sbjct: 387 GKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDS 446

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           + V LF  M    +  D++ + +++ G+   G L+ A  L   +L +GL  D  TY+ +I
Sbjct: 447 EAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMI 506

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            GL +   +     + + M+ NG  P+   YNV +  L+++ ++  + K    + D+G  
Sbjct: 507 KGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFP 566

Query: 591 PDIITYNTII 600
            D  T   +I
Sbjct: 567 VDATTAELLI 576



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 175/384 (45%), Gaps = 35/384 (9%)

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM-DLVPDLIIYSILI 290
           A   F  +L + P P +  F+ L     K      A  L  ++  + D   D+   +I I
Sbjct: 58  AVDFFHRMLTLTPFPCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAI 117

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           + L    +   G  +L      GL+  +V  +++++     GDV  A+   ++M N G+ 
Sbjct: 118 NCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYH 177

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            N  +Y  L+ GLC+ G    A     +++ R L P+++ Y++++DG CK          
Sbjct: 178 CNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCK---------- 227

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC-RLKRA 469
                                GL+G+AL    +   + + PN+  +N L+ G C      
Sbjct: 228 --------------------RGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGW 267

Query: 470 TDTVKLF-MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
            + V LF  ++    I PDV T ++L+ G   +G L  A  +   M++ G+ P+V+TY++
Sbjct: 268 REGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNS 327

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVA--PDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
           +I G      +   + +F LM R G    P +  +N L++   K   +D A+ L  ++  
Sbjct: 328 LIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVG 387

Query: 587 RGLEPDIITYNTIICGYCSLNSCL 610
           +GL+PD+ T+ ++I G+C +   L
Sbjct: 388 KGLDPDVFTWTSLIGGFCEVKKPL 411


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 232/499 (46%), Gaps = 9/499 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI  Y   G++D+++ I   M  +G+ ++  +   L++       V +  ++  +M+
Sbjct: 364 YGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMK 423

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L++G  ++     AF +  ++  +G    +VT N +LK L   G + 
Sbjct: 424 DWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVE 483

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +A  +++++   G  PN VT+ TL++AF K    ++A  ++   +       + +Y+ +I
Sbjct: 484 HALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMI 543

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  K  +L +  E+ L   + G   D + + +++D Y  +G++  A++  D     G  
Sbjct: 544 CGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGIS 603

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +   Y+ LI G+ +   L +  GL  ++  R L P+++TY SLI G+C  G +   ++ 
Sbjct: 604 SSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNA 663

Query: 411 YDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           Y  MI +G+ P+      +V SL  +G + +A     Q   +  I        L     R
Sbjct: 664 YFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLR 723

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
                  V  F    M     + I + + I G+    ++     +   +L +G  PD  T
Sbjct: 724 HLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYT 783

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           Y ++IH       ++    +   M   G+ P+I +YN L+N L K  NLD A +LF +L 
Sbjct: 784 YCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLA 843

Query: 586 DRGLEPDIITYNTIICGYC 604
            +GL P ++TYNT+I GYC
Sbjct: 844 RKGLSPTVVTYNTLIDGYC 862



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 213/443 (48%), Gaps = 5/443 (1%)

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           L RA   K   VY   +  L +   I +A       + R F  +    + ILK     G 
Sbjct: 142 LSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGM 201

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A  +FD +   G  P++ + ++L++   +  +  KA  +Y  M+ + ++PD+  Y+I
Sbjct: 202 TKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTI 261

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +++   K GR+ E    +        + +VV ++S++D YV +GDV  A +    M   G
Sbjct: 262 MVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKG 321

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
              N  +Y++LIKG C++G++ +A  L G ++ + L      Y  LI  +C +G++ D  
Sbjct: 322 IPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDAL 381

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            + D M+K GLK + V+C+ LING      +  A           L P+ + +NTL+DG 
Sbjct: 382 RIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGF 441

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+ +      KL   M    +   V+T+  L++ +   G +  A+ ++  M KRG+ P+ 
Sbjct: 442 CKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNE 501

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           +TY  ++   FK       + ++K     G    I +YN ++    K   L  A ++F +
Sbjct: 502 VTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLK 561

Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
           + + G  PD ITY T+I GYC +
Sbjct: 562 MKELGFPPDEITYRTLIDGYCKV 584



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 132/597 (22%), Positives = 284/597 (47%), Gaps = 25/597 (4%)

Query: 27  ISDLQFNQANAILANLIKTN---NPTPAIQFFKWTHNCVS-SPNIA---QLIHVLLQSDM 79
           +++L F+ +N ++ +L+  N   NP  +++FFK         P+++   +++H+L ++ M
Sbjct: 89  LANLSFSFSNELM-DLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARM 147

Query: 80  RDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSF-------LIENYVRIGKIDESV 132
                   +++V+     Y    ++ D L     ++SF       +++ +   G    ++
Sbjct: 148 YKEVRVYLNELVVLCKNNYIASAVW-DELVSVYREFSFSPTVFDMILKVFAEKGMTKFAL 206

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGL 188
            +F  M   G   S      L+S LV +    +   +   M   G       Y  ++N  
Sbjct: 207 CVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAY 266

Query: 189 LRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNV 248
            ++G ++ AF+  +++ +    PN+VT N ++      G +  A  +  ++   G   N 
Sbjct: 267 CKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENS 326

Query: 249 VTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLT 308
            T++ LI  +CK  ++E+A +L   MME +L  D  +Y +LI     AGR+ +   +   
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386

Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR 368
            L  GLK++ V+ +S+++ Y  +G V +A +    M +    P+   Y+ L+ G C+Q  
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQED 446

Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV-CS 427
            ++A  L  ++  + +  +++TY++L+      G +     +++ M KRG+ P+ V  C+
Sbjct: 447 FIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCT 506

Query: 428 LLIN----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
           LL      G    A+  +  ++      ++ ++NT++ G C++++     ++F+ M    
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG 566

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
             PD IT+  LI G    G+L  A+ L     + G++     Y+++I G+F+ + +    
Sbjct: 567 FPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLN 626

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
            +   M+   ++P++  Y  L+     +  +D A   + ++ D+G+ P+II  + I+
Sbjct: 627 GLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIV 683



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 220/509 (43%), Gaps = 85/509 (16%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG 175
           LI  Y ++G ++++ E+   M D    L PD      L+          + +KLC  M  
Sbjct: 402 LINGYCKLGHVNKAAEVLVSMKDWN--LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHN 459

Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT-C-------------- 216
           KG       Y  L+  L   G +E+A H+   + +RG  PN VT C              
Sbjct: 460 KGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDR 519

Query: 217 --------------------NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
                               N ++   C   ++  A  +F  +  +G  P+ +T+ TLI+
Sbjct: 520 AMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLID 579

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
            +CK   L +A +L ++     +     +Y+ LI G+F++  L++ N LL    +R L  
Sbjct: 580 GYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSP 639

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV + S++  +   G + +A   Y +M++ G  PN+I  S ++  L + G++ EA  + 
Sbjct: 640 NVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLIL 699

Query: 377 GQVL------------------IRRLEPSL-----------------LTYSSLIDGFCKS 401
            Q+                   +R LE                    + Y+  I G CKS
Sbjct: 700 HQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKS 759

Query: 402 GKLRDGFSLYDNMIKRGLKPDA-VVCSLLIN----GLMGDALRFFFQSVRMTLIPNLFIF 456
             + D   +  +++ +G  PD    CSL+      G + +A       +   L+PN+ ++
Sbjct: 760 KNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVY 819

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           N L++G C+        +LF  +    + P V+T+  LI G    G  + A+ L  +M +
Sbjct: 820 NALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMRE 879

Query: 517 RGLTPDVITYSAIIHGLF-KGKN-ISVGL 543
            G+ P  ITYS +IHGL+ +GK+  SVGL
Sbjct: 880 EGICPSSITYSTLIHGLYMEGKSEQSVGL 908



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 163/323 (50%), Gaps = 4/323 (1%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI+ Y ++G + E++++       GI  S ++   L++ +  S  + +   L   M+
Sbjct: 574 YRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMK 633

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +        Y  L+ G   KG+++ A++ + ++I +G  PNI+  +KI+  L  +G+I 
Sbjct: 634 NRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKID 693

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A+ +   +  + P         L  +  +  + +K    +        + + I+Y+I I
Sbjct: 694 EANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAI 753

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K+  + +   +L   L +G   D   + S++ A   +G V  A    D M+N G +
Sbjct: 754 TGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLV 813

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN++ Y+ LI GLC+ G L  A  LF ++  + L P+++TY++LIDG+CK G+  +   L
Sbjct: 814 PNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALEL 873

Query: 411 YDNMIKRGLKPDAVVCSLLINGL 433
            D M + G+ P ++  S LI+GL
Sbjct: 874 KDKMREEGICPSSITYSTLIHGL 896



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 8/190 (4%)

Query: 199 HMHRQVIQRGF--------VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVT 250
           H+  Q I   F        + N +  N  +  LC +  I +   +   LLL G  P+  T
Sbjct: 724 HLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYT 783

Query: 251 FSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTAL 310
           + +LI+A     K+ +AF L + M+   LVP++++Y+ LI+GL K+G L     L     
Sbjct: 784 YCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLA 843

Query: 311 DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
            +GL   VV +++++D Y   G    A++  D+M   G  P+ I+YS LI GL  +G+  
Sbjct: 844 RKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSE 903

Query: 371 EACGLFGQVL 380
           ++ GL  +++
Sbjct: 904 QSVGLLNEMM 913


>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
          Length = 595

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 229/468 (48%), Gaps = 25/468 (5%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL----VDSNSVGQYYKLC 170
           YS+LI++Y ++G + ++V+ +  M   GI  +  +V  L+ C     + S  +  + K  
Sbjct: 38  YSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFK 97

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            +       +Y   M+   + G +  A  +  ++   G  P+ +    ++   C+ G++ 
Sbjct: 98  DSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQ 157

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           NA  +F+ +L    +P++VT++ L + FCK   + + F L + M +  L P+ + Y I I
Sbjct: 158 NAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAI 217

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G L E   L     ++G+    V++SS++  Y+  G    A   + R+   G L
Sbjct: 218 VGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNL 277

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
            +  S S LI  LC+ G +  A  +   +L   + P +++YS LI  +C++G +      
Sbjct: 278 VDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLW 337

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           + +M++RGL  D +V ++L+NG      + +A + F Q   + + P++  +  L+DG  +
Sbjct: 338 FHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLK 397

Query: 466 --LKRATDTV----KLFMLMGMYN----------IKPDVITHTVLIRGIASQGSLSSAIL 509
             L++  + +    + F+L   +N          I+PDV  +TVLI G      L  A  
Sbjct: 398 ETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARE 457

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           LF +ML++GLTPD   Y+A+I+G      IS    + + M   G+ PD
Sbjct: 458 LFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPD 505



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 196/445 (44%), Gaps = 58/445 (13%)

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
           N ++  LC   ++  A  L +     G  P+V  +S LI ++CK   L KA   Y  M+ 
Sbjct: 4   NMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVS 63

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
             +  +  I S L+    K G   E     L   D GL LD V+++  MD Y   G++  
Sbjct: 64  HGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNE 123

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           AV+  + M  GG  P+ I Y+ LI G C +G +  A  +F ++L   +EP ++TY+ L  
Sbjct: 124 AVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILAS 183

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPD---------------------------------- 422
           GFCKSG + + F L D M  +GL+P+                                  
Sbjct: 184 GFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDH 243

Query: 423 ------AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
                 ++VC  L++G    A   F +  R   + + F  + L++  CR+        + 
Sbjct: 244 IEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVC 303

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
            +M  +N+ PDVI+++ LI      G +  A L F  M++RGL+ DVI Y+ +++G  K 
Sbjct: 304 KIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKA 363

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL-----------------K 579
             +     +F  M   G+ PD+  Y VLL+  +KE  L                     K
Sbjct: 364 GRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKE-TLQQGWEGIAKERRSFLLRANHNK 422

Query: 580 LFGQLTDRGLEPDIITYNTIICGYC 604
           L   + D  +EPD+  Y  +I G C
Sbjct: 423 LLSSMKDMQIEPDVPCYTVLIDGKC 447


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 205/406 (50%), Gaps = 8/406 (1%)

Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
           ++++   P++   N ++   C   +I +A ++ D +   G  P+VVT + +I  FC + K
Sbjct: 35  ILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGK 94

Query: 264 LEKAFQLYN-LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           ++ A +++  L+ + +  P LI Y+ILI+     G + E  +LL   L RGL+ D   ++
Sbjct: 95  IDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYN 154

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNG-GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
            +       G V RA + + R LN  G  P+VI+Y+IL++ L  QG+  E      ++  
Sbjct: 155 VITRGLCKEGKVDRAFE-FVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFS 213

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGD 436
           R  EP+++TYS LI   C+ GK+ +  +L   M ++GL PDA     LI      G +  
Sbjct: 214 RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDM 273

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A+ F    +    +P++  +NT+M   C+       V++F  +      P+V ++  ++ 
Sbjct: 274 AIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLS 333

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
            + S G    A+ +  QML +G+ PDVITY+++I  L +   +   + +   M      P
Sbjct: 334 ALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQP 393

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +I  Y  +L  L K   +D A+++   + + G +P+  TY  +I G
Sbjct: 394 NIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEG 439



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 182/366 (49%), Gaps = 7/366 (1%)

Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
           +P+V+  + LI  F     ++KA ++  ++ E    PD+  Y+ +I G  KA R++    
Sbjct: 7   QPDVILCTKLIKGFFNSRNIDKATRVMGIL-EKHGKPDVFAYNAVISGFCKANRIESAKT 65

Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML-NGGFLPNVISYSILIKGL 363
           +L     +G   DVV  + ++  + G G +  A++ ++ +L +    P +I+Y+ILI+  
Sbjct: 66  VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
             +G + EA  L  ++L R LEP   TY+ +  G CK GK+   F     +  RG KPD 
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDV 185

Query: 424 VVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
           +  ++L+  L+      +  ++  +       PN+  ++ L+   CR  +  ++V L  +
Sbjct: 186 ITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKV 245

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M    + PD   +  LI     +G L  AI     M+  G  PD++ Y+ I+  L K  N
Sbjct: 246 MKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGN 305

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
               + +F  ++  G  P+++ YN +L+ L    +   AL +  Q+  +G++PD+ITYN+
Sbjct: 306 GDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNS 365

Query: 599 IICGYC 604
           +I   C
Sbjct: 366 LISCLC 371



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 195/438 (44%), Gaps = 71/438 (16%)

Query: 81  DVASHVFDKMVIQF---GKTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESV 132
           DV +H  + M+  F   GK     ++F + L D  C      Y+ LIE Y+  G IDE++
Sbjct: 78  DVVTH--NIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEAL 135

Query: 133 EIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKG 192
           ++   M   G  L PD                                Y  +  GL ++G
Sbjct: 136 KLLDEMLSRG--LEPDTF-----------------------------TYNVITRGLCKEG 164

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
            ++ AF   R +  RG  P+++T N +L+ L   G+          +   G +PNVVT+S
Sbjct: 165 KVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYS 224

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
            LI++ C++ K+E++  L  +M E  L PD   Y  LI    + G+L    E L   +  
Sbjct: 225 ILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICD 284

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G   D+V ++++M A    G+   AV+ + ++   G  PNV SY+ ++  L   G    A
Sbjct: 285 GFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRA 344

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
            G+  Q+L + ++P ++TY+SLI   C+ G + +                         G
Sbjct: 345 LGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAI-----------------------G 381

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
           L+ D L   FQ       PN+  + T++ G C+  R  D +++   M     +P+  T+T
Sbjct: 382 LLADMLSGRFQ-------PNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYT 434

Query: 493 VLIRGIASQGSLSSAILL 510
           +LI GI   GS + A+ L
Sbjct: 435 LLIEGIGFSGSRTQAMEL 452



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 181/395 (45%), Gaps = 41/395 (10%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  +++G  +   IE+A  +  ++ ++GF P++VT N ++   C  G+I  A  +F+ L
Sbjct: 46  AYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEEL 105

Query: 240 LLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
           L     KP ++T++ LI A+  E  +++A +L + M+   L PD   Y+++  GL K G+
Sbjct: 106 LKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGK 165

Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
           +    E + T   RG K DV+ ++ ++ A +  G      +    + + G  PNV++YSI
Sbjct: 166 VDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSI 225

Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           LI  LC+ G++ E+  L   +  + L P    Y  LI  FC+ GKL       D MI  G
Sbjct: 226 LISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDG 285

Query: 419 LKPD-----AVVCSLLINGLMGDALRFF-------------------------------- 441
             PD      ++ +L  NG    A+  F                                
Sbjct: 286 FLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRAL 345

Query: 442 ---FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
               Q +   + P++  +N+L+   CR     + + L   M     +P+++++  ++ G+
Sbjct: 346 GMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGL 405

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
                +  AI +   M++ G  P+  TY+ +I G+
Sbjct: 406 CKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGI 440


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 193/394 (48%), Gaps = 30/394 (7%)

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           +K ++E    +  ++I+    P++  CN+IL+ L     +  A  ++  +   G KP +V
Sbjct: 482 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 541

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           T++TL++++CK  K+++   L + M      P+ + Y++LI+GL K G  ++   L+   
Sbjct: 542 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 601

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           L  GLK+    ++ ++  Y   G +  A+   + M+  G  P V +Y+  I GLC+ GR+
Sbjct: 602 LKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 661

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A      +L   L P +++Y++LI G+C+ G L   F L+D                 
Sbjct: 662 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE---------------- 705

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
                   LR  +      L P +  +NTL+DG CR        +L + M    I PD++
Sbjct: 706 --------LRSIY------LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 751

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
           T+T+L+ G    GSLS A   F +ML  GL  D   Y+  I G  K  + S    + + M
Sbjct: 752 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEM 811

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
              G  PD+ IYNV+++ L K  NL+ A +L  +
Sbjct: 812 LAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 845



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 222/470 (47%), Gaps = 25/470 (5%)

Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYKLCR-AMRGKGFCVYEFLMNGLLRKGVIENAFHMH 201
           + + PDL  R++S    S  +    +L R A    GF   EF+   +L      N     
Sbjct: 383 VIVDPDLFVRVLSSFRTSPRMA--LRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSA 440

Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
             V++R    N+     +L   C++ ++  +  + D+L+ V               + K+
Sbjct: 441 YWVMERVINANMHRIVDVLIGGCVSSEV--SVKILDLLIWV---------------YSKK 483

Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
           + +E+   +++ M++  L PD+   + ++  L     + +  E+  T  + G+K  +V +
Sbjct: 484 SMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTY 543

Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
           ++++D+Y   G V + +     M   G  PN ++Y++LI GL ++G   +A GL G++L 
Sbjct: 544 NTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLK 603

Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGD 436
             L+ S  TY+ LI G+   G L +  SL + M+ +G  P     +  I GL     M D
Sbjct: 604 TGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSD 663

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A++     +   L+P++  +NTL+ G CRL        LF  +    + P ++T+  L+ 
Sbjct: 664 AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 723

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+  QG L  A  L  +M+  G+ PD++TY+ +++G  K  ++S+    F  M   G+  
Sbjct: 724 GLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL 783

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           D   Y   +   +K  +   A  L  ++  +G  PD+I YN ++ G C L
Sbjct: 784 DSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 833



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 212/460 (46%), Gaps = 38/460 (8%)

Query: 47  NPTPAIQFFKWTHNCVSSPNIAQ-------LIHVLLQSDMRDVASHVFDKMVIQFGKTYN 99
           +P  A++ F+W     S P   +       ++ +L Q+++   A  V ++++       N
Sbjct: 400 SPRMALRLFRWAE---SQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVI-----NAN 451

Query: 100 FFRLFRDSLGDFGCDYS--------FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL-- 149
             R+    +G  GC  S         LI  Y +   +++ + +F  M  +   LSPD+  
Sbjct: 452 MHRIVDVLIG--GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKM--IKSRLSPDVKN 507

Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVI 205
             R++  L D + + +  ++ R M   G       Y  L++   + G ++    +  ++ 
Sbjct: 508 CNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQ 567

Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
           +RG  PN VT N ++  L   G+   A  L   +L  G K +  T++ LI  +  +  L 
Sbjct: 568 RRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLA 627

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +A  L   M+     P +  Y+  I GL K GR+ +  + L   L   L  DVV +++++
Sbjct: 628 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLI 687

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
             Y  +G++ +A   +D + +    P +++Y+ L+ GLC+QG L  A  L  +++   + 
Sbjct: 688 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 747

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING--LMGDALRFFFQ 443
           P ++TY+ L++G CK G L      +D M+  GL+ D+   +  I G   +GD  R F  
Sbjct: 748 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 807

Query: 444 SVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
              M      P+L I+N ++DG C+L    +  +L    G
Sbjct: 808 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKDG 847


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 187/396 (47%), Gaps = 30/396 (7%)

Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
           R  +     V+  L+   L  G + +A   +R   +  F   I TC K+L+ L       
Sbjct: 65  RGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFK 124

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
                ++ +L  G   ++  F+ L++ FCK+  +  A  +++ + +  L P ++ Y+ L+
Sbjct: 125 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLM 184

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +G  + G L EG  L    L  G++ DV  +S +++       +  A + +D ML  G +
Sbjct: 185 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           PN ++++ LI G C+ GR+  A  ++ Q+L + L P L+TY++LI G CK G L+    L
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
            D M  +GLKPD +                               + TL+DGCC+     
Sbjct: 305 IDEMSVKGLKPDKIT------------------------------YTTLIDGCCKEGDLD 334

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
              +    M   NI+ D + +T LI G+  +G    A  +  +ML  GL PD  TY+ II
Sbjct: 335 SAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 394

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           +   K  ++  G  + K M+R+G  P +  YNVL+N
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 233/490 (47%), Gaps = 72/490 (14%)

Query: 54  FFKWTHNCVSS------PNIAQLIHVLLQSDMRDVASHVFDKMVIQFGK--TYNFFRLFR 105
           FF W  +  +S       +   +IH L    M   A  +   +V + GK      F    
Sbjct: 3   FFTWLSSPANSNFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 106 DSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS 162
           ++ G    D   +S LI  Y+  G + +++E +    +   ++  D  ++++  L+    
Sbjct: 63  ETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKL-- 120

Query: 163 VGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
             +Y+KL          V+ F                 + ++++ G+  ++   N ++ R
Sbjct: 121 --KYFKL----------VWGF-----------------YEEILECGYPASLYFFNILMHR 151

Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
            C +G I  A S+FD +   G +P+VV+++TL+N + +   L++ F+L + M+   + PD
Sbjct: 152 FCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 211

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
           +  YS+LI+GL K  ++ + NEL    L +GL  + V F++++D +   G V  A++ Y 
Sbjct: 212 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 271

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
           +ML+    P++I+Y+ LI GLC++G L +A  L  ++ ++ L+P  +TY++LIDG CK G
Sbjct: 272 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEG 331

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
            L   F     MI+  ++ D V  + LI+GL                             
Sbjct: 332 DLDSAFEHRKRMIQENIRLDEVAYTALISGL----------------------------- 362

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+  R+ D  K+   M    +KPD  T+T++I     +G +     L  +M + G  P 
Sbjct: 363 -CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421

Query: 523 VITYSAIIHG 532
           V+TY+ +++G
Sbjct: 422 VVTYNVLMNG 431



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 181/380 (47%), Gaps = 7/380 (1%)

Query: 230 GNASSLFDVLLLV--GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           G+AS++F  +L      + ++  FS LI A+ +   L  A + Y L  E      +    
Sbjct: 52  GSASAVFAAILETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCR 111

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +++ L K    K         L+ G    +  F+ +M  +   GD+  A   +D +   
Sbjct: 112 KVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKW 171

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V+SY+ L+ G  + G L E   L   +L   ++P + TYS LI+G CK  K+ D 
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231

Query: 408 FSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+D M+ +GL P+ V  + LI     NG +  A+  + Q +  +L P+L  +NTL+ G
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+         L   M +  +KPD IT+T LI G   +G L SA     +M++  +  D
Sbjct: 292 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 351

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
            + Y+A+I GL +         M + M   G+ PD   Y +++N   K+ ++    KL  
Sbjct: 352 EVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 411

Query: 583 QLTDRGLEPDIITYNTIICG 602
           ++   G  P ++TYN ++ G
Sbjct: 412 EMQRDGHVPSVVTYNVLMNG 431



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 164/328 (50%), Gaps = 5/328 (1%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+ ++S LI    ++G L++  E      +    + +     V++  + +         Y
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + +L  G+  ++  ++IL+   C+ G +  A  +F  +    L PS+++Y++L++G+ + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L +GF L   M+  G++PD    S+LINGL     M DA   F + +   L+PN   F
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  R    ++++  M   ++ PD+IT+  LI G+  +G L  A  L  +M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 310

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL PD ITY+ +I G  K  ++       K M +  +  D   Y  L++ L +E     
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVD 370

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+  ++   GL+PD  TY  II  +C
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFC 398



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 54/122 (44%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           + D+   + LI      G L  AI  +    +      + T   ++  L K K   +   
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWG 128

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            ++ +   G    +  +N+L++   K+ ++  A  +F  +T  GL P +++YNT++ GY 
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 605 SL 606
            L
Sbjct: 189 RL 190


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 202/400 (50%), Gaps = 8/400 (2%)

Query: 211 PNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL 270
           P+  + N++L  L    ++  A   F   L     P++ TF+ +I+  CK  +L KA  +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFK---AGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
              +    L P ++ Y+ +IDG  K   AGR+   + LL   ++ G+  + V F+ +++ 
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y    +   AV+ ++ M   G   +V++YS L+ GLC +G++ E   L  ++    L P+
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
           L T +S+++GFCK G + D     D+M ++ +KP+ V  ++L++G      M DAL    
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                 + PN  I+N L+ G  R         L   M M  ++ D++T+ VLI  +  +G
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            +  A+ L  +ML  GL P  +TY+ II+G  +  NI     +   ME+     ++  YN
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYN 507

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           V +  L +   ++   +L  ++ ++GL P+ +TY+TI  G
Sbjct: 508 VFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG 547



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 197/419 (47%), Gaps = 14/419 (3%)

Query: 131 SVEIFAYMSDMGIYLSPDL--VQRLMSCLVDSNSVG----QYYKLCRAMRGKGFCVYEFL 184
           S E F    D      P    V RL+S LV +  V      +    R         +  +
Sbjct: 132 SYEAFLLAGDAHPRHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIV 191

Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG---NASSLFDVLLL 241
           ++GL + G +  A  + + +   G  P++VT N I+   C  G+ G   +  +L   ++ 
Sbjct: 192 ISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVE 251

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G  PN VTF+ L+N +CK++    A +++  M +  +   ++ YS L+ GL   G+++E
Sbjct: 252 AGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEE 311

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
           G +L+    D GL  ++   +SV++ +   G +  A    D M      PNV++Y+IL+ 
Sbjct: 312 GVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVD 371

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G  +  ++ +A  +   +  + + P+   Y+ LI GF ++G  R    L D M  +G++ 
Sbjct: 372 GYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRA 431

Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D V  ++LI  L     +  A++   + + + L P    +NT+++G C         ++ 
Sbjct: 432 DIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIR 491

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
             M     + +V+T+ V I+ +   G +     L  +ML++GL P+ +TY  I  G+ +
Sbjct: 492 TRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMME 550



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 182/384 (47%), Gaps = 13/384 (3%)

Query: 236 FDVLLLVGP-----KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           ++  LL G      +P+  + + L++A     +++ A + +   +   + PDL  ++I+I
Sbjct: 133 YEAFLLAGDAHPRHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVI 192

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT---YDRMLNG 347
            GL K G+L++  ++       GL   VV +++++D Y   G  GR          M+  
Sbjct: 193 SGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEA 252

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  PN +++++L+ G C+      A  +F ++  + +  S++TYS+L+ G C  GK+ +G
Sbjct: 253 GISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEG 312

Query: 408 FSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L D M   GL P+    + ++NG     +M DA  +     +  + PN+  +  L+DG
Sbjct: 313 VKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDG 372

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
             RL +  D + +   M    ++P+   +  LI G    G   S   L  +M  +G+  D
Sbjct: 373 YRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRAD 432

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
           ++TY+ +I  L     +   + +   M   G+ P    YN ++N   ++ N+ +A ++  
Sbjct: 433 IVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRT 492

Query: 583 QLTDRGLEPDIITYNTIICGYCSL 606
           ++       +++TYN  I   C +
Sbjct: 493 RMEKGKKRANVVTYNVFIKCLCRM 516



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 163/330 (49%), Gaps = 13/330 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDM-GIYLSPDLVQRLMSCLV-----DSNSVGQYYK 168
           Y+ +I+ Y + G+      + A + +M    +SP+ V    + LV     DSN+     +
Sbjct: 223 YNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVT--FNVLVNGYCKDSNTAAAV-R 279

Query: 169 LCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
           +   M+ +G       Y  L+ GL  +G +E    +  ++   G VPN+ T N +L   C
Sbjct: 280 VFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFC 339

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
             G + +A    D +     KPNVVT++ L++ + +  K++ A  +   M    + P+  
Sbjct: 340 KKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNAR 399

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
           IY+ LI G  + G  +  + LL     +G++ D+V ++ ++ A    G+V +AV+  D M
Sbjct: 400 IYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEM 459

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           L  G  P  ++Y+ +I G C++G +  A  +  ++   +   +++TY+  I   C+ GK+
Sbjct: 460 LMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKM 519

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
            +   L + M+++GL P+ V    +  G+M
Sbjct: 520 EETNELLNEMLEKGLVPNGVTYDTIKEGMM 549



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 161/331 (48%), Gaps = 10/331 (3%)

Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS--SVMDAYVGIGDVGRAVQTY 341
           +I  +L+  L  A +     E  L A D   +     FS   ++ A V    V  A + +
Sbjct: 114 LIADLLVLALASASQPLASYEAFLLAGDAHPRHRPSAFSVNRLLSALVAAERVDLAERAF 173

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
              L     P++ +++I+I GLC+ G+L +A  +   +    L PS++TY+++IDG+CK 
Sbjct: 174 KAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKR 233

Query: 402 GKLRDGF---SLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNL 453
           G+    +   +L   M++ G+ P+ V  ++L+NG   D     A+R F +  +  +  ++
Sbjct: 234 GRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASV 293

Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             ++ L+ G C   +  + VKL   M    + P++ T   ++ G   +G ++ A      
Sbjct: 294 VTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDS 353

Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
           M ++ + P+V+TY+ ++ G  +   +   L + + M   GV P+  IYN L+    +  +
Sbjct: 354 MEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGD 413

Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
             +   L  ++  +G+  DI+TYN +I   C
Sbjct: 414 WRSVSGLLDEMRMKGVRADIVTYNVLIGALC 444



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 33/260 (12%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+  S + L+  L    R+  A   F   L RR+ P L T++ +I G CK+G+LR    +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
             ++   GL P  V                               +NT++DG C+  RA 
Sbjct: 208 AKDIRAWGLAPSVVT------------------------------YNTIIDGYCKRGRAG 237

Query: 471 DTVKLFML---MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
               +  L   M    I P+ +T  VL+ G     + ++A+ +F +M ++G+   V+TYS
Sbjct: 238 RMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYS 297

Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
           A++ GL     +  G+ +   M+  G+ P++A  N +LN   K+  +  A      +  +
Sbjct: 298 ALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQK 357

Query: 588 GLEPDIITYNTIICGYCSLN 607
            ++P+++TY  ++ GY  L+
Sbjct: 358 NVKPNVVTYTILVDGYRRLD 377



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 59/284 (20%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIY------------------------------ 144
           YS L+      GK++E V++   M D+G+                               
Sbjct: 296 YSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSME 355

Query: 145 ---LSPDLVQRLMSCLVDS----NSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGV 193
              + P++V    + LVD     + +     +  AM GKG      +Y  L+ G  R G 
Sbjct: 356 QKNVKPNVVT--YTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGD 413

Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
             +   +  ++  +G   +IVT N ++  LC+ G++  A  L D +L+VG +P  +T++T
Sbjct: 414 WRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNT 473

Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
           +IN +C++  ++ A+++   M +     +++ Y++ I  L + G+++E NELL   L++G
Sbjct: 474 IINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKG 533

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYS 357
           L  + V + ++ +                 M+  G+ P+V  ++
Sbjct: 534 LVPNGVTYDTIKEG----------------MMEKGYTPDVRGFT 561


>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 153/602 (25%), Positives = 276/602 (45%), Gaps = 58/602 (9%)

Query: 21  SESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTH---NCVSSPNIAQ-LIHVLLQ 76
           + S+ H+S L  +Q +A           + A+++F+W     N V S +  + LIH L  
Sbjct: 33  APSQEHVSQLILDQKSA-----------SEALEYFRWASTVPNFVHSQSTYRALIHKLCT 81

Query: 77  SDMRDVASHVFDKMVIQFGKTYN---FFRLFRDSLGDFGCDYSFLIENYVRIGKI----- 128
               D    + D+M    G       F  + R      G   + +    +++  +     
Sbjct: 82  FRRFDTVKQLLDEMPHSLGAPPGDDIFITIIR------GLGRARMTRTVIKVLDLVYKFH 135

Query: 129 -DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF--LM 185
              S++IF  + D+ +    D+ +             ++Y+      G     Y F  LM
Sbjct: 136 GSPSLKIFNSILDVLVKEDIDMAR-------------EFYRKSMMASGVEGDDYTFGILM 182

Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
            GL     I   F + + +  RG  PN V  N +L  LC NG++G A +L + +      
Sbjct: 183 KGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEM----ED 238

Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
           PN VTF+ LI+ +CKE    +A  L      M  VPD++  + +++ L  AGR  E  E+
Sbjct: 239 PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEV 298

Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
           L      G  LDVV +++++  + G G V   +    +M N G LPNV +Y++LI G  +
Sbjct: 299 LERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSE 358

Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM--IKRGLKPDA 423
            G L  A  LF  +    ++ + +T+ +LI G C   ++ DGFS+ + M   K G +   
Sbjct: 359 SGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHI 418

Query: 424 VVCSLLINGLMGDALRFFFQSVR-MTLIPNLF---IFNTLMD-GCCRLKRATDTVKLFML 478
              + +I GL+      F +S   +T + NLF   +  +LM    C+     D  +++  
Sbjct: 419 SPYNSIIYGLLKK--NGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQ 476

Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
           M      P ++ +  L+ G + QG++  A+ L  +M+     P   T++A+I G  +   
Sbjct: 477 MIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGK 536

Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
           +   L + + +   G  P+   Y+ L+++L +  +L  A+++F Q+ D+G+ PD+  +N+
Sbjct: 537 VESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNS 596

Query: 599 II 600
           ++
Sbjct: 597 LL 598



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 200/451 (44%), Gaps = 11/451 (2%)

Query: 99  NFFRLFRDSLGDFGCDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
            F+R    + G  G DY+F  L++      +I E  ++   +   G+  +  +   L+  
Sbjct: 160 EFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHA 219

Query: 157 LVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
           L  +  VG+   L   M       +  L++G  ++G    A  +  +    GFVP++V+ 
Sbjct: 220 LCRNGKVGRARNLMNEMEDPNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSV 279

Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
            K+L+ LC  G+   A+ + + +  +G   +VV ++TLI  FC   K++        M  
Sbjct: 280 TKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMEN 339

Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
              +P++  Y++LI G  ++G L    +L       G+K + V F +++        +  
Sbjct: 340 KGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIED 399

Query: 337 AVQTYDRMLNG--GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
                + M     G   ++  Y+ +I GL ++    E+     +  +  L P  +  S +
Sbjct: 400 GFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTK--MGNLFPRAVDRSLM 457

Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTL 449
           I   CK G + D   +YD MI  G  P  +V + L++G      + +A+    + +    
Sbjct: 458 ILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNC 517

Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
            P    FN ++ G CR  +    +KL   +      P+  T++ LI  +   G L  A+ 
Sbjct: 518 FPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQ 577

Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
           +F QM+ +G+ PD+  +++++  L + ++ S
Sbjct: 578 VFMQMVDKGILPDLFIWNSLLLSLSQERHFS 608



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 9/221 (4%)

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQS 444
           T+  L+ G C + ++ +GF L   +  RG+ P+ VV + L+     NG +G A     + 
Sbjct: 177 TFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEM 236

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
                 PN   FN L+ G C+   +   + L          PDV++ T ++  + + G  
Sbjct: 237 ED----PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRT 292

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
             A  +  ++   G   DV+ Y+ +I G      + VGLH  K ME  G  P++  YNVL
Sbjct: 293 MEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVL 352

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           ++   +   LD AL LF  +   G++ + +T++T+I G CS
Sbjct: 353 ISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCS 393



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 6/186 (3%)

Query: 436 DALRFFFQSVRMT--LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
           D  R F++   M   +  + + F  LM G C   R  +  KL  L+    + P+ + +  
Sbjct: 156 DMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNT 215

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           L+  +   G +  A  L  +M      P+ +T++ +I G  K  N    L + +     G
Sbjct: 216 LLHALCRNGKVGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQALVLLEKSFSMG 271

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
             PD+     +L +L        A ++  ++   G   D++ YNT+I G+C      +  
Sbjct: 272 FVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGL 331

Query: 614 YFKSQI 619
           +F  Q+
Sbjct: 332 HFLKQM 337



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 4/157 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           D S +I  + + G I+++  ++  M D G   S  +   L+       +V +  +L   M
Sbjct: 453 DRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEM 512

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
                      +  ++ G  R+G +E+A  +   +  RG VPN  T + ++  LC NG +
Sbjct: 513 IANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDL 572

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
             A  +F  ++  G  P++  +++L+ +  +E    K
Sbjct: 573 QKAMQVFMQMVDKGILPDLFIWNSLLLSLSQERHFSK 609


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 202/426 (47%), Gaps = 42/426 (9%)

Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRG-FVP 211
           ++  L  +    +  +L R M       Y  ++ G   +G ++ A  + R++ +RG   P
Sbjct: 160 MLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 219

Query: 212 NIVTCNKILKRLCINGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQL 270
           N  T   ++   C  G++  A  +FD +L  G  KP  V ++ LI  +C + KL+ A   
Sbjct: 220 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 279

Query: 271 YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVG 330
            + M+E  +   +  Y++L+  LF  GR  E  EL+     +GL LDV            
Sbjct: 280 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDV------------ 327

Query: 331 IGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
                                   +Y+ILI G C++G + +A  +F  +  R +  +++T
Sbjct: 328 -----------------------FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 364

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSV 445
           Y+SLI    K G++++   L+D  ++RG++PD V+ + LIN     G +  A     +  
Sbjct: 365 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 424

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
           +  + P+   +NTLM G C L R  +  KL   M    I+PD++T+  LI G + +G + 
Sbjct: 425 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 484

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
            A+ +  +M+ +G  P ++TY+A+I GL K        +M K M  NG+ PD + Y  L+
Sbjct: 485 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544

Query: 566 NMLIKE 571
             L  E
Sbjct: 545 EGLTTE 550



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 200/406 (49%), Gaps = 11/406 (2%)

Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
            T N +L+ LC  G+   A  L   +    P+PN VT++T+I  FC   +++ A  +   
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 210

Query: 274 MMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYVGI 331
           M E   + P+   Y  +I G  K GR+ E  ++    L +G +K + V++++++  Y   
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270

Query: 332 GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTY 391
           G +  A+   DRM+  G    V +Y++L+  L   GR  EA  L  ++  + L   + TY
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330

Query: 392 SSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVR 446
           + LI+G CK G ++    +++NM +RG++   V  + LI      G + +  + F ++VR
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390

Query: 447 MTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSS 506
             + P+L ++N L++            ++   M    I PD +T+  L+RG+   G +  
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450

Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
           A  L  +M KRG+ PD++TY+ +I G     ++   L +   M   G  P +  YN L+ 
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510

Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
            L K    D A  +  ++ + G+ PD  TY ++I G  + +   ID
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAID 556



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 175/345 (50%), Gaps = 11/345 (3%)

Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
           AF L+  M  + L      ++I++  L  AG+     ELL     +  + + V +++V+ 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL----RQMPRPNAVTYNTVIA 193

Query: 327 AYVGIGDVGRAVQTYDRMLN-GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR-RL 384
            +   G V  A+     M   GG  PN  +Y  +I G C+ GR+ EA  +F ++L +  +
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALR 439
           +P  + Y++LI G+C  GKL       D M++RG+       +LL++ L  D     A  
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
              +     L  ++F +N L++G C+       +++F  M    ++  V+T+T LI  ++
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
            +G +     LF + ++RG+ PD++ Y+A+I+      NI     +   ME+  +APD  
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            YN L+  L     +D A KL  ++T RG++PD++TYNT+I GY 
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYS 478



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 159/305 (52%), Gaps = 21/305 (6%)

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           L L    F+ ++      G   RA++   +M      PN ++Y+ +I G C +GR+  A 
Sbjct: 150 LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAAL 205

Query: 374 GLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG-LKPDAVVCSLLIN 431
            +  ++  R  + P+  TY ++I G+CK G++ +   ++D M+ +G +KP+AV+ + LI 
Sbjct: 206 DIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 265

Query: 432 GL-----MGDAL----RFFFQSVRMTLIP-NLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
           G      +  AL    R   + V MT+   NL +    MDG     R T+  +L   MG 
Sbjct: 266 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG-----RGTEAYELVEEMGG 320

Query: 482 YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISV 541
             +  DV T+ +LI G   +G++  A+ +F  M +RG+   V+TY+++I+ L K   +  
Sbjct: 321 KGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 380

Query: 542 GLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIIC 601
              +F    R G+ PD+ +YN L+N      N+D A ++ G++  + + PD +TYNT++ 
Sbjct: 381 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 440

Query: 602 GYCSL 606
           G C L
Sbjct: 441 GLCLL 445



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 182/387 (47%), Gaps = 60/387 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  +I  + ++G++DE+V++F  M   G  + P+ V                        
Sbjct: 224 YGTVISGWCKVGRVDEAVKVFDEMLTKG-EVKPEAV------------------------ 258

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                +Y  L+ G   +G ++ A     ++++RG    + T N ++  L ++G+   A  
Sbjct: 259 -----MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + +   G   +V T++ LIN  CKE  ++KA +++  M    +   ++ Y+ LI  L 
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K G+++E ++L   A+ RG++ D+V+++++++++   G++ RA +    M      P+ +
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+ L++GLC  GR+ EA  L  ++  R ++P L+TY++LI G+   G ++D   + + M
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 493

Query: 415 IKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + +G                                P L  +N L+ G C+  +  D   
Sbjct: 494 MNKGFN------------------------------PTLLTYNALIQGLCKNGQGDDAEN 523

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQ 501
           +   M    I PD  T+  LI G+ ++
Sbjct: 524 MVKEMVENGITPDDSTYISLIEGLTTE 550


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 205/408 (50%), Gaps = 13/408 (3%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  ++ ++      P+IVT N ++   C  G++  A S+   +L +G  P+ +T +TLI 
Sbjct: 67  AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIK 126

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C   K+ +A   ++ ++      + + Y ILI+GL K G  +   ++L     + +  
Sbjct: 127 GLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNT 186

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV++S+++D+      V  A + Y +M+     P+V+++S LI G C  G+  EA GLF
Sbjct: 187 NVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLF 246

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
            ++++  + P + T++ L+D  CK G  ++  ++   M+K             +N +   
Sbjct: 247 HEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKE------------VNQV-NK 293

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
           A   F    +  + P++  +  ++   C++K   + + LF  M    I PD +T++ LI 
Sbjct: 294 AKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLID 353

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+     +S A  L  QM  RG   DVITY++ +H L K   +   + + K ++  G+ P
Sbjct: 354 GLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQP 413

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +I  YN+L++ L KE   + A  +F  L  +G +  + TYN +I G C
Sbjct: 414 NINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLC 461



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 122/494 (24%), Positives = 219/494 (44%), Gaps = 52/494 (10%)

Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
           + RL  +++      ++ +I  Y  +G++D +  + A +  MG +     +  L+  L  
Sbjct: 71  YHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCL 130

Query: 160 SNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVT 215
           +  V +       +  +GF      Y  L+NGL + G    A  + R++  +    N+V 
Sbjct: 131 NGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVM 190

Query: 216 CNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMM 275
            + I+  LC    +  A  L+  +++    P+VVTFS LI  FC   + ++AF L++ M+
Sbjct: 191 YSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMV 250

Query: 276 EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
             ++ PD+  ++IL+D L K G  KE   +L   +                    +  V 
Sbjct: 251 LTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKE------------------VNQVN 292

Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
           +A   ++ +      P+V SY+I+IK LC+   + EA  LF ++  + + P  +TYSSLI
Sbjct: 293 KAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLI 352

Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
           DG CKS ++   + L D M  RG   D +                               
Sbjct: 353 DGLCKSERISHAWELLDQMHARGQPADVIT------------------------------ 382

Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
           + + +   C+  +    V L   +    I+P++ T+ +LI G+  +G   +A ++F  +L
Sbjct: 383 YTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLL 442

Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
            +G    V TY+ +I+GL         + + + ME NG  PD+  Y  ++  L K     
Sbjct: 443 IKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENH 502

Query: 576 AALKLFGQLTDRGL 589
            A KL  ++  RGL
Sbjct: 503 KAEKLLREMIARGL 516



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 25/276 (9%)

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A+  Y R+      P++++++ +I   C  G +  A  +  ++L     P  +T ++LI 
Sbjct: 67  AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIK 126

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGDALRFFFQSVRMT----LI 450
           G C +GK+ +    +D++I RG + + V   +LINGL  MG+  R   Q +R      + 
Sbjct: 127 GLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGET-RAALQVLRKIDGKLVN 185

Query: 451 PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
            N+ +++T++D  C+ K  T+  +L+  M +  + PDV+T + LI G    G    A  L
Sbjct: 186 TNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGL 245

Query: 511 FFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
           F +M+   + PDV T++ ++  L K                 G   +    NVL  M+ +
Sbjct: 246 FHEMVLTNINPDVCTFNILVDALCK----------------EGSTKETK--NVLAVMMKE 287

Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
              ++ A  +F  +  R + PD+ +Y  II   C +
Sbjct: 288 VNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKI 323



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 123/283 (43%), Gaps = 42/283 (14%)

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGR--LVEACGLFGQVLIRRLEPSLLT 390
           DV  A+ ++ RML     P++I ++ ++  L +        A  L+ ++ +  + PS++T
Sbjct: 26  DVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVT 85

Query: 391 YSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSV 445
           ++++I+ +C  G++   FS+   ++K G  PD +  + LI GL     + +AL F     
Sbjct: 86  FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDH-- 143

Query: 446 RMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
              +I   F  N                               +++ +LI G+   G   
Sbjct: 144 ---VIARGFRLNE------------------------------VSYGILINGLCKMGETR 170

Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           +A+ +  ++  + +  +V+ YS II  L K K ++    ++  M    V+PD+  ++ L+
Sbjct: 171 AALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALI 230

Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
                      A  LF ++    + PD+ T+N ++   C   S
Sbjct: 231 YGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGS 273


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 213/417 (51%), Gaps = 12/417 (2%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  + +     G  P++ T   ++  LC         S+   +  +G +P VVTF+TLIN
Sbjct: 26  AISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLIN 85

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELL--LTALDRGL 314
             C E  +  A +  + + +M    +   +  +I+GL K G        L  +   +RG 
Sbjct: 86  GLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGF 145

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
            L ++ +S++MD+    G +  A+  +  M   G  P++++Y+ LI GLC  GR  EA  
Sbjct: 146 DL-LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATT 204

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-- 432
           L G ++ + + P++ T++ L+D FCK GK+    ++   M+  G++PD V  + +I+G  
Sbjct: 205 LLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHC 264

Query: 433 ---LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN--IKPD 487
               M DA++ F   +   L+PN+  +++L+ G C+ +     +  F+L  M N  +  D
Sbjct: 265 LLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAI--FVLDEMVNNGLNLD 322

Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
           V+T + LI G    G   +AI LF  M +    P++ T + I+ GLFK +  S  + +F+
Sbjct: 323 VVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFR 382

Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            ME+  +  +I  YN++L+ +      + A +LF  L  +G++ D++ Y T+I G C
Sbjct: 383 KMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLC 439



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 207/436 (47%), Gaps = 24/436 (5%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL---- 235
            +  L+NGL  +G +  A      +   G+  N  T   I+  LC  G    A S     
Sbjct: 79  TFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKI 138

Query: 236 ------FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
                 FD+L         + +ST++++ CK+  L  A   ++ M    + PDL+ Y+ L
Sbjct: 139 EGRNRGFDLL---------IAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSL 189

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I GL   GR  E   LL   + +G+  +V  F+ ++D +   G + RA      M++ G 
Sbjct: 190 IHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGV 249

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
            P+V++Y+ +I G C   ++ +A  +F  ++ + L P+++TYSSLI G+CK+  +     
Sbjct: 250 EPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIF 309

Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
           + D M+  GL  D V  S LI G         A+  F        +PNL     ++DG  
Sbjct: 310 VLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLF 369

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
           + +  ++ + LF  M   N++ +++T+ +++ G+ S G  + A  LF  +  +G+  DV+
Sbjct: 370 KCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVV 429

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
            Y+ +I GL K   +     +   ME NG  P+   YNVL+  L++  ++  + K    +
Sbjct: 430 AYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLM 489

Query: 585 TDRGLEPDIITYNTII 600
             +GL  D  T   +I
Sbjct: 490 KGKGLSADATTTELLI 505



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 183/381 (48%), Gaps = 17/381 (4%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P P    F+TL     K      A  L      + + PD+   +I+I+ L        G 
Sbjct: 3   PLPPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGF 62

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
            +L      G++  VV F+++++     G+VG A +  D + + G+  N  ++  +I GL
Sbjct: 63  SVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGL 122

Query: 364 CQQGRLVEACGLFGQVLIR-RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
           C+ G    A     ++  R R    L+ YS+++D  CK G L    + +  M  +G++PD
Sbjct: 123 CKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPD 182

Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            V  + LI+GL       +A       +R  ++PN+  FN L+D  C+  + +    +  
Sbjct: 183 LVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMC 242

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            M    ++PDV+T+  +I G      ++ A+ +F  M+ +GL P+V+TYS++IHG  K +
Sbjct: 243 FMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTR 302

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           NI+  + +   M  NG+  D+  ++ L+    K    +AA++LF  + +    P++ T  
Sbjct: 303 NINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQT-- 360

Query: 598 TIICGYCSLNSCLIDGYFKSQ 618
                 C++   ++DG FK Q
Sbjct: 361 ------CAI---ILDGLFKCQ 372



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 174/339 (51%), Gaps = 6/339 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L++GL   G    A  +   ++++G +PN+ T N ++   C  G+I  A ++   +
Sbjct: 185 AYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFM 244

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           + VG +P+VVT++++I+  C  +++  A +++ LM+   L+P+++ YS LI G  K   +
Sbjct: 245 VHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNI 304

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   +L   ++ GL LDVV +S+++  +   G    A++ +  M     LPN+ + +I+
Sbjct: 305 NKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAII 364

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           + GL +     EA  LF ++    LE +++TY+ ++DG C  GK  D   L+  +  +G+
Sbjct: 365 LDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGI 424

Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + D V  + +I      GL+ DA     +       PN F +N L+ G  +    + + K
Sbjct: 425 QIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTK 484

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
             MLM    +  D  T  +LI   ++    +SA+ +F Q
Sbjct: 485 YLMLMKGKGLSADATTTELLISYFSANKE-NSALQVFLQ 522


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 233/480 (48%), Gaps = 15/480 (3%)

Query: 145 LSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG--FCVYEFLMNGLLRKGVIENAFHMHR 202
           ++ + ++R+++   ++  + +   +   MR  G  FCV     N +LR G+   +F   R
Sbjct: 112 MAHEAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVE--TANWVLRAGLDTGSFAYAR 169

Query: 203 QV-----IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
           +V      + G +P+  +   ++   C +G++    +L  V+   G   +  T + ++  
Sbjct: 170 KVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRV 229

Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
           FC++ +     +L+  M+EM   P+++ Y+  IDGL K   +K+   +L   + +GLK +
Sbjct: 230 FCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPN 289

Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRML-NGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           V   +S+++    IG   RA + + +++ +  + PNV +Y+++I G C++G+L  A  L 
Sbjct: 290 VYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLL 349

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
           G+++ + L P+  TY++LI G CK G     F L + M + G +P+    + LI+GL   
Sbjct: 350 GRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKK 409

Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
             + +A +    +    L  +   +  ++   C+    T  + LF  M      PD+ T+
Sbjct: 410 GKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTY 469

Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
           T LI     Q  +  +  LF + L   L P   TY+++I G  K    +  L +F+ M +
Sbjct: 470 TTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQ 529

Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLI 611
           NG   D   Y  L++ L KE  L+ A  L+  + D+ L P  +T  T+   YC     ++
Sbjct: 530 NGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVV 589



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 217/442 (49%), Gaps = 17/442 (3%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
           + ++  + + G+  +  E+F  M +MG    P++V     +  L     V Q + +   M
Sbjct: 224 TVIVRVFCQKGRFRDVSELFRRMLEMGT--PPNVVNYTAWIDGLCKRAYVKQAFYVLEEM 281

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRG-FVPNIVTCNKILKRLCINGQ 228
             KG       +  L+NGL + G  E AF +  ++I+   + PN+ T   ++   C  G+
Sbjct: 282 VAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGK 341

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L   ++  G  PN  T++TLI+  CKE     AF+L N M      P++  Y+ 
Sbjct: 342 LARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNA 401

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LIDGL K G+++E  ++L  A ++GL+LD V ++ ++  +   G +  A+  ++RM   G
Sbjct: 402 LIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENG 461

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P++ +Y+ LI   CQQ ++ E+  LF + L   L P+  TY+S+I G+CK GK     
Sbjct: 462 CHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSAL 521

Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +++ M++ G + D++    LI+GL     + +A   +   +   L+P      TL    
Sbjct: 522 RVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEY 581

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           CR ++A   V    ++   + +    T  VL+R +++ G +  A L   + L   L  D 
Sbjct: 582 CRREKAVVAVS---ILDRLDKRRKNHTVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDR 638

Query: 524 ITYSAIIHGLFKGKNISVGLHM 545
           + Y++ I+  +  K  ++   +
Sbjct: 639 LAYTSFINSCYANKKYALATEI 660


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 259/588 (44%), Gaps = 49/588 (8%)

Query: 61  CVSSPN---IAQLIHVLLQSDMRDVASHVFDKMVI---QFGKTYNFFRLFRDSLGDFGC- 113
           C S+P+   ++ +   + + D+  ++   +++++    +FG      +L+ + L +F   
Sbjct: 131 CYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSM 190

Query: 114 ---DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL--VDSNSVGQYYK 168
               ++ +I  Y ++G + E+ +    M   G  LSPD        L    S  V   ++
Sbjct: 191 DIYTFNLMINVYCKMGFVKEAKQFMCKMIQAG--LSPDYFTSTSFILGYCRSKDVDSAFR 248

Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +   M  +    Y  L++GL   G I+ A  +  ++      PN+ T   ++K LC    
Sbjct: 249 VFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC-RKN 307

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  L D +L     P+++T+++LI   C+   L+ A++L +LM E  LVPD   Y  
Sbjct: 308 VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGC 367

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
            ID L K+ R++E   L  +  + G+  +V+++S ++D Y  +G V  A   +++ML+  
Sbjct: 368 FIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKN 427

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             PN  +++ LI GLC  G L EA  LF Q++   L+P++ T++ LI    K G   D  
Sbjct: 428 CSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAH 487

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
                M+  G KP A   +  I      G + +A     Q     + P+ F + +L+   
Sbjct: 488 KCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY 547

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR---------------GIASQGSLSS-- 506
            +L        +   M   + +P   T   LI+               G+ S  +     
Sbjct: 548 GKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVP 607

Query: 507 ------------AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
                        I LF +M K G TPD   Y  +I G+ K +N+ + L +   M++ G+
Sbjct: 608 GSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGI 667

Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +P   ++N +++   K      A  +   +   G  P +    T+ICG
Sbjct: 668 SPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICG 715



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 207/471 (43%), Gaps = 31/471 (6%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLC 170
           Y+ LI    R G +D +  + + M + G  L PD  QR   C +D    SN V +  +L 
Sbjct: 330 YNSLIAGQCRAGHLDSAYRLLSLMKERG--LVPD--QRTYGCFIDFLCKSNRVEEARRLF 385

Query: 171 RAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
            ++  +G      +Y  L++G  + G ++ A  +  +++ +   PN  T N ++  LC  
Sbjct: 386 DSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSA 445

Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
           G +  A SLFD ++ +G KP V TF+ LI    K+   + A +    MM     P    Y
Sbjct: 446 GNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTY 505

Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
           +  I+    AG+++E  ++++   + G+  D   ++S++ AY  +G    A      M +
Sbjct: 506 NAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFD 565

Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID----GFCKSG 402
               P+  ++  LIK L  +  +VE  G          E  + + S+  D       K  
Sbjct: 566 ADCEPSHHTFLSLIKQLFDKRYVVEKSG----------ETGVESVSNFGDVPGSNMWKMM 615

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFN 457
           +      L++ M K G  PD+     LI+G+     +G AL+   Q  +  + P+  +FN
Sbjct: 616 EFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFN 675

Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR 517
            ++  CC+L++  +   +   M      P +     LI G+  +G       +F ++   
Sbjct: 676 AVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGC 735

Query: 518 GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           G   D I +  +I G+ K   +     +F+ ME+NG       Y++L   L
Sbjct: 736 GYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 124/536 (23%), Positives = 219/536 (40%), Gaps = 37/536 (6%)

Query: 101 FRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
           FR+F +        Y+ LI      G+IDE+V +F  M D   Y +      L+  L   
Sbjct: 247 FRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK 306

Query: 161 N---SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
           N   ++G   ++           Y  L+ G  R G +++A+ +   + +RG VP+  T  
Sbjct: 307 NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYG 366

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
             +  LC + ++  A  LFD L   G   NV+ +S LI+ +CK  K+++A  L+  M+  
Sbjct: 367 CFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK 426

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
           +  P+   ++ LI GL  AG LKE   L    +  GLK  V  F+ ++   +  GD   A
Sbjct: 427 NCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDA 486

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
            +   +M++ G  P   +Y+  I+  C  G++ EA  +  Q+    + P   TY+SLI  
Sbjct: 487 HKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKA 546

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--------------------GDA 437
           + K G     F +  +M     +P       LI  L                     GD 
Sbjct: 547 YGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDV 606

Query: 438 --------------LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
                         +  F +  +    P+   +  L+ G C+++     +KL   M    
Sbjct: 607 PGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEG 666

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           I P  +    +I           A  +   M+  G +P +     +I GL++      G 
Sbjct: 667 ISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGN 726

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
            +FK +   G   D   + +L++ ++K+  ++   +LF ++   G      TY+ +
Sbjct: 727 SVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 10/226 (4%)

Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFF 441
           SL  Y+ L+    + G + +   LY  M++  +  D    +L+IN     G + +A +F 
Sbjct: 156 SLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFM 215

Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
            + ++  L P+ F   + + G CR K      ++F  M   N     +++  LI G+   
Sbjct: 216 CKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN----EVSYNQLIHGLCEA 271

Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
           G +  A+ LF +M      P+V TY+A+I GL + KN+   + +   M    + PD+  Y
Sbjct: 272 GRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITY 330

Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           N L+    +  +LD+A +L   + +RGL PD  TY   I   C  N
Sbjct: 331 NSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSN 376



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 154/407 (37%), Gaps = 74/407 (18%)

Query: 102 RLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSC 156
           RLF DSL + G       YS LI+ Y ++GK+DE+  +F  M       +      L+  
Sbjct: 383 RLF-DSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHG 441

Query: 157 LVDSNSVGQYYKLCRAMRGKGF--CVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
           L  + ++ +   L   M   G    VY F  L+  +L++G  ++A    ++++  G  P 
Sbjct: 442 LCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPV 501

Query: 213 IVTCNKILKRLCINGQIGNAS--------------------------------SLFDVL- 239
             T N  ++  C  G++  A                                 S FDVL 
Sbjct: 502 ARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLK 561

Query: 240 --LLVGPKPNVVTFSTLINA-FCKEAKLEKAFQL-------------YNL--MMEMDLV- 280
                  +P+  TF +LI   F K   +EK+ +               N+  MME D+V 
Sbjct: 562 SMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVI 621

Query: 281 ------------PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
                       PD   Y  LI G+ K   L    +LL      G+    +VF++V+   
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681

Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
             +   G A    + M+  G  P +     LI GL ++G       +F ++         
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDE 741

Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG 435
           + +  LIDG  K G + +   L++ M K G        S+L   L G
Sbjct: 742 IAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHG 788


>gi|255661022|gb|ACU25680.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 376

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 185/354 (52%), Gaps = 6/354 (1%)

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C+   ++ A ++Y  ++E  + PD ++Y+ +++G F+ GR+K+  EL    + R    +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGFFRVGRIKDCFELW-ELMGREGSRNV 59

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
             F+ +M      G+V   +  ++ M N GF+ + I+Y IL+ G C+   + ++  +   
Sbjct: 60  ASFNIMMRGLFDNGEVDEVISIWELMKNSGFVEDSITYGILVHGFCKNEYINKSLHVLEM 119

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG--- 435
              +        YS++I+G CK  KL    S+ + MIK G KP A V + LINGL+G   
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKAHVYNALINGLVGASK 179

Query: 436 --DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             DA R F +       P +  +NTL++G C+ +R  +   L   M        VIT+++
Sbjct: 180 FEDAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWNSSVITYSL 239

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI+G+     +  A+ L+ Q+  +G  PDV  ++ +IHGL     + + L ++  +    
Sbjct: 240 LIKGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDINHWN 299

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            AP++  +N L+    K+ ++  AL ++ ++   GL+PDII+YN  + G CS N
Sbjct: 300 CAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIISYNITLKGLCSCN 353



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 177/351 (50%), Gaps = 6/351 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  ++NG  R G I++ F +  +++ R    N+ + N +++ L  NG++    S+++++
Sbjct: 27  VYNTMLNGFFRVGRIKDCFEL-WELMGREGSRNVASFNIMMRGLFDNGEVDEVISIWELM 85

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G   + +T+  L++ FCK   + K+  +  +      V D   YS +I+GL K  +L
Sbjct: 86  KNSGFVEDSITYGILVHGFCKNEYINKSLHVLEMAERKGGVLDAFAYSAMINGLCKEAKL 145

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   +L   +  G K    V++++++  VG      A + +  M      P +++Y+ L
Sbjct: 146 DKAVSVLNGMIKSGCKPKAHVYNALINGLVGASKFEDAFRVFHEMGTTHCSPTIVTYNTL 205

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+  R  EA  L  ++L +    S++TYS LI G C   K+     L++ +  +G 
Sbjct: 206 INGLCKGERFGEAYDLVKEMLEKGWNSSVITYSLLIKGLCLGHKVEMALQLWNQVTSKGF 265

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KPD  + ++LI+GL     M  AL  +F        PNL   NTLM+G  +     + + 
Sbjct: 266 KPDVQMHNILIHGLCSVGKMQLALSLYFDINHWNCAPNLVTHNTLMEGFYKDGDIRNALV 325

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           ++  +    ++PD+I++ + ++G+ S   +S +IL     L + + P +IT
Sbjct: 326 IWARILRNGLQPDIISYNITLKGLCSCNRISDSILFLHDALTKKIVPTIIT 376



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 174/348 (50%), Gaps = 10/348 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++  + R+G+I +  E++  M   G          +M  L D+  V +   +   M+
Sbjct: 28  YNTMLNGFFRVGRIKDCFELWELMGREGSRNVASF-NIMMRGLFDNGEVDEVISIWELMK 86

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF      Y  L++G  +   I  + H+     ++G V +    + ++  LC   ++ 
Sbjct: 87  NSGFVEDSITYGILVHGFCKNEYINKSLHVLEMAERKGGVLDAFAYSAMINGLCKEAKLD 146

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+ + ++  G KP    ++ LIN     +K E AF++++ M      P ++ Y+ LI
Sbjct: 147 KAVSVLNGMIKSGCKPKAHVYNALINGLVGASKFEDAFRVFHEMGTTHCSPTIVTYNTLI 206

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K  R  E  +L+   L++G    V+ +S ++        V  A+Q ++++ + GF 
Sbjct: 207 NGLCKGERFGEAYDLVKEMLEKGWNSSVITYSLLIKGLCLGHKVEMALQLWNQVTSKGFK 266

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V  ++ILI GLC  G++  A  L+  +      P+L+T+++L++GF K G +R+   +
Sbjct: 267 PDVQMHNILIHGLCSVGKMQLALSLYFDINHWNCAPNLVTHNTLMEGFYKDGDIRNALVI 326

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           +  +++ GL+PD +  ++ + GL     + D++ F   ++   ++P +
Sbjct: 327 WARILRNGLQPDIISYNITLKGLCSCNRISDSILFLHDALTKKIVPTI 374



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 130/281 (46%), Gaps = 41/281 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    +  K+D++V +   M   G      +   L++ LV ++     +++   M 
Sbjct: 132 YSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKAHVYNALINGLVGASKFEDAFRVFHEM- 190

Query: 175 GKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           G   C      Y  L+NGL +      A+ + ++++++G+  +++T + ++K LC+  ++
Sbjct: 191 GTTHCSPTIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWNSSVITYSLLIKGLCLGHKV 250

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  L++ +   G KP+V   + LI+  C   K++ A  LY  +   +  P+L+ ++ L
Sbjct: 251 EMALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDINHWNCAPNLVTHNTL 310

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++G +K G                                   D+  A+  + R+L  G 
Sbjct: 311 MEGFYKDG-----------------------------------DIRNALVIWARILRNGL 335

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            P++ISY+I +KGLC   R+ ++       L +++ P+++T
Sbjct: 336 QPDIISYNITLKGLCSCNRISDSILFLHDALTKKIVPTIIT 376


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 175/325 (53%), Gaps = 30/325 (9%)

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
           ++++++ G+  ++   N ++ R C  G+I  + S+FD +   G +P+VV+F+TL+N + +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIR 183

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
           +  L+K F+L + M    + PD+  YS+LI+GL K  ++ E NEL    LD+GL  + V 
Sbjct: 184 QGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVT 243

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           F++++D +   G V  A++ Y +ML+    P++I+Y+ LI GLC++G L +A  L  ++ 
Sbjct: 244 FTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMS 303

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRF 440
           ++ L+P  +TY++LIDG CK G L   F     MI+  ++ D V  + LI+GL       
Sbjct: 304 MKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGL------- 356

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
                                  C+  R+ D  K+   M    +KPD  T+T++I     
Sbjct: 357 -----------------------CQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCK 393

Query: 501 QGSLSSAILLFFQMLKRGLTPDVIT 525
           +G + +   L  +M + G  P V+T
Sbjct: 394 KGDVWTGSKLLKEMQRDGHVPSVVT 418



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 177/384 (46%), Gaps = 40/384 (10%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  L+   L  G + +A   +R   +  F     TC K+L+ L            +  +
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEI 127

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   ++  F+ L++ FCKE ++                        L   +F A R 
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEIR-----------------------LSQSVFDAIR- 163

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                        GL+  VV F+++M+ Y+  GD+ +  +    M   G  P+V +YS+L
Sbjct: 164 -----------KWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVL 212

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC++ ++ EA  LF ++L + L P+ +T+++LIDG CK+GK+     +Y  M+ + L
Sbjct: 213 INGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSL 272

Query: 420 KPDAVVCSLLINGL--MGD--ALRFFFQSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD +  + LI GL   GD    R     + M  L P+   + TL+DG C+        +
Sbjct: 273 SPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFE 332

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
               M   NI+ D + +T LI G+  +G    A  +  +ML  GL PD  TY+ II+   
Sbjct: 333 YRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFC 392

Query: 535 KGKNISVGLHMFKLMERNGVAPDI 558
           K  ++  G  + K M+R+G  P +
Sbjct: 393 KKGDVWTGSKLLKEMQRDGHVPSV 416



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 172/372 (46%), Gaps = 7/372 (1%)

Query: 231 NASSLFDVLLLVG--PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +AS++F  +L      + ++  FS LI A+ +   L  A + Y L  E            
Sbjct: 47  SASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRK 106

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           +++ L K    K         L+ G    +  F+ +M  +   G++  +   +D +   G
Sbjct: 107 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWG 166

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
             P+V+S++ L+ G  +QG L +   L   +    ++P + TYS LI+G CK  K+ +  
Sbjct: 167 LRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAN 226

Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            L+  M+ +GL P+ V  + LI     NG +  A+  + Q +  +L P+L  +NTL+ G 
Sbjct: 227 ELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
           C+         L   M M  +KPD IT+T LI G    G L +A     +M++  +  D 
Sbjct: 287 CKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDD 346

Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
           + Y+A+I GL +         M + M   G+ PD   Y +++N   K+ ++    KL  +
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKE 406

Query: 584 LTDRGLEPDIIT 595
           +   G  P ++T
Sbjct: 407 MQRDGHVPSVVT 418



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 5/328 (1%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+ ++S LI    ++G L++  E      +   ++       V++  + +         Y
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             +L  G+  ++  ++IL+   C++G +  +  +F  +    L PS++++++L++G+ + 
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQ 184

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L  GF L   M   G++PD    S+LINGL     M +A   F + +   L+PN   F
Sbjct: 185 GDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTF 244

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  +    ++++  M   ++ PD+IT+  LI G+  +G L  A  L  +M  
Sbjct: 245 TTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSM 304

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL PD ITY+ +I G  K  ++       K M    +  D   Y  L++ L +E     
Sbjct: 305 KGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVD 364

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+  ++   GL+PD  TY  II  +C
Sbjct: 365 AEKMLREMLSVGLKPDSGTYTMIINEFC 392



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 31/241 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS LI    +  K+DE+ E+F  M D G  L P+ V                        
Sbjct: 209 YSVLINGLCKESKMDEANELFXEMLDKG--LVPNGV------------------------ 242

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                 +  L++G  + G ++ A  +++Q++ +   P+++T N ++  LC  G +  A +
Sbjct: 243 -----TFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARN 297

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + + + G KP+ +T++TLI+  CK+  LE AF+    M+E ++  D + Y+ LI GL 
Sbjct: 298 LINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLC 357

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           + GR  +  ++L   L  GLK D   ++ +++ +   GDV    +    M   G +P+V+
Sbjct: 358 QEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 417

Query: 355 S 355
           +
Sbjct: 418 T 418



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 8/179 (4%)

Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKL 169
           G  ++ LI+ + + GK+D ++EI+  M  +   LSPDL+    L+  L     + Q   L
Sbjct: 241 GVTFTTLIDGHCKNGKVDLAMEIYKQM--LSQSLSPDLITYNTLIYGLCKKGDLKQARNL 298

Query: 170 CRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
              M  KG       Y  L++G  + G +E AF   +++I+     + V    ++  LC 
Sbjct: 299 INEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQ 358

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
            G+  +A  +   +L VG KP+  T++ +IN FCK+  +    +L   M     VP ++
Sbjct: 359 EGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 417


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 208/420 (49%), Gaps = 6/420 (1%)

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           R G    + H+   ++++G+ P+++ C K++K       I  A  + ++L   G +P+V 
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            ++ LIN FCK  +++ A ++ + M   D  PD + Y+I+I  L   G+L    ++L   
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           L    +  V+ ++ +++A +  G V  A++  D ML+ G  P++ +Y+ +I+G+C++G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
             A  +   + ++  EP +++Y+ L+      GK  +G  L   M      P+ V  S+L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 430 I-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I     +G + +A+          L P+ + ++ L+   CR  R    ++    M     
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PD++ +  ++  +   G    A+ +F ++ + G +P+  +Y+ +   L+   +    LH
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M   M  NG+ PD   YN +++ L +E  +D A +L   +      P ++TYN ++ G+C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 200/405 (49%), Gaps = 5/405 (1%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +++++   P++   N ++   C   +I +A+ + D +      P+ VT++ +I + C   
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           KL+ A ++ N ++  +  P +I Y+ILI+     G + E  +L+   L RGLK D+  ++
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++      G V RA +    +   G  P+VISY+IL++ L  QG+  E   L  ++   
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA-----VVCSLLINGLMGDA 437
           + +P+++TYS LI   C+ GK+ +  +L   M ++GL PDA     ++ +    G +  A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           + F    +    +P++  +NT++   C+  +A   +++F  +G     P+  ++  +   
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           + S G    A+ +  +M+  G+ PD ITY+++I  L +   +     +   M      P 
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +  YN++L    K   ++ A+ +   +   G  P+  TY  +I G
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 191/394 (48%), Gaps = 11/394 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NG  +   I++A  +  ++  + F P+ VT N ++  LC  G++  A  + + L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L    +P V+T++ LI A   E  +++A +L + M+   L PD+  Y+ +I G+ K G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               E++     +G + DV+ ++ ++ A +  G      +   +M +    PNV++YSIL
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC+ G++ EA  L   +  + L P   +Y  LI  FC+ G+L       + MI  G 
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 420 KPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD      V+ +L  NG    AL  F +   +   PN   +NT+      L  + D ++
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA---LWSSGDKIR 456

Query: 475 -LFMLMGMYN--IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            L M++ M +  I PD IT+  +I  +  +G +  A  L   M      P V+TY+ ++ 
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           G  K   I   +++ + M  NG  P+   Y VL+
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 188/392 (47%), Gaps = 6/392 (1%)

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           KI  R C +G    +  L + ++  G  P+V+  + LI  F     + KA ++  ++ + 
Sbjct: 94  KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              PD+  Y+ LI+G  K  R+ +   +L     +    D V ++ ++ +    G +  A
Sbjct: 154 G-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++  +++L+    P VI+Y+ILI+    +G + EA  L  ++L R L+P + TY+++I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPN 452
            CK G +   F +  N+  +G +PD +  ++L+  L+      +  +   +       PN
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  ++ L+   CR  +  + + L  LM    + PD  ++  LI     +G L  AI    
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            M+  G  PD++ Y+ ++  L K       L +F  +   G +P+ + YN + + L    
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +   AL +  ++   G++PD ITYN++I   C
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLC 484



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 192/407 (47%), Gaps = 13/407 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  + ++ +ID++  +   M       SPD V    ++  L     +    K+   
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKD--FSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +           Y  L+   + +G ++ A  +  +++ RG  P++ T N I++ +C  G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +   L L G +P+V++++ L+ A   + K E+  +L   M      P+++ YSI
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L + G+++E   LL    ++GL  D   +  ++ A+   G +  A++  + M++ G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP++++Y+ ++  LC+ G+  +A  +FG++      P+  +Y+++      SG      
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +   M+  G+ PD +  + +I+     G++ +A             P++  +N ++ G 
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           C+  R  D + +   M     +P+  T+TVLI GI   G  + A+ L
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/427 (22%), Positives = 193/427 (45%), Gaps = 14/427 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG 175
           LI+ +  +  I ++V +   +   G    PD+     L++     N +    ++   MR 
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG---QPDVFAYNALINGFCKMNRIDDATRVLDRMRS 186

Query: 176 KGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           K F      Y  ++  L  +G ++ A  +  Q++     P ++T   +++   + G +  
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDE 246

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L D +L  G KP++ T++T+I   CKE  +++AF++   +      PD+I Y+IL+ 
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLR 306

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L   G+ +EG +L+          +VV +S ++      G +  A+     M   G  P
Sbjct: 307 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  SY  LI   C++GRL  A      ++     P ++ Y++++   CK+GK      ++
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426

Query: 412 DNMIKRGLKPDAVVCSLLINGLM--GDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRL 466
             + + G  P++   + + + L   GD +R     + M    + P+   +N+++   CR 
Sbjct: 427 GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
               +  +L + M      P V+T+ +++ G      +  AI +   M+  G  P+  TY
Sbjct: 487 GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTY 546

Query: 527 SAIIHGL 533
           + +I G+
Sbjct: 547 TVLIEGI 553



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/343 (21%), Positives = 154/343 (44%), Gaps = 43/343 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LIE  +  G +DE++++   M   G  L PD+     ++  +     V + +++ R 
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRG--LKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  KG       Y  L+  LL +G  E    +  ++      PN+VT + ++  LC +G+
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A +L  ++   G  P+  ++  LI AFC+E +L+ A +    M+    +PD++ Y+ 
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408

Query: 289 LIDGLFKAGRLKEGNE-----------------------------------LLLTALDRG 313
           ++  L K G+  +  E                                   ++L  +  G
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  D + ++S++      G V  A +    M +  F P+V++Y+I++ G C+  R+ +A 
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
            +   ++     P+  TY+ LI+G   +G   +   L +++++
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G+   ++ L   M+++G  PDVI  + +I G F  +NI   + + +++E+ G  PD+  
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFA 160

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           YN L+N   K   +D A ++  ++  +   PD +TYN +I   CS
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 82/173 (47%), Gaps = 4/173 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           +Y+ ++    + GK D+++EIF  + ++G   +      + S L  S    +   +   M
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G       Y  +++ L R+G+++ AF +   +    F P++VT N +L   C   +I
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
            +A ++ + ++  G +PN  T++ LI          +A +L N ++ +D + +
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE 577



 Score = 42.4 bits (98), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           I H   +  N    LH+ + M R G  PD+ +   L+       N+  A+++   L   G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 589 LEPDIITYNTIICGYCSLN 607
            +PD+  YN +I G+C +N
Sbjct: 155 -QPDVFAYNALINGFCKMN 172


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 192/397 (48%), Gaps = 30/397 (7%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           ++  L++        ++ +++  RG  PN+V CN ++   C  G I  A S+F  +L +G
Sbjct: 93  ILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMG 152

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN +TF+TLI   C + ++ +A   ++ ++ +    + I Y  LIDGL K G  +   
Sbjct: 153 YNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAAL 212

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +LL     + ++ +VV++S+++D       V  A   Y  M++ G  PNV++YS LI G 
Sbjct: 213 DLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 272

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
              G+L +A  LF +++   ++P + T++ L+D FCKSGK+     L D M  RG +P  
Sbjct: 273 FTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRG-QP-- 329

Query: 424 VVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
                                      PN+  +++++D  C+  R    V L   +    
Sbjct: 330 ---------------------------PNIVTYSSILDALCKTHRVDKAVALLTKLKDQG 362

Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
           I+P++ T+T+LI G+ + G L  A  +F  +L +G    V+TY  + +G  K        
Sbjct: 363 IRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEAS 422

Query: 544 HMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
            +   ME NG  PD   Y ++   L K+   D A KL
Sbjct: 423 ALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKL 459



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 177/379 (46%), Gaps = 30/379 (7%)

Query: 226 NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLII 285
           N  + +A SLF+ LL   P P  + F+ ++ +  K         L   M    + P+L+ 
Sbjct: 65  NNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVN 124

Query: 286 YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML 345
            +ILI+   + G +     +    L  G   + + F++++      G + +A+  +D+++
Sbjct: 125 CNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLV 184

Query: 346 NGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLR 405
             GF  N ISY  LI GLC+ G    A  L  +V  + ++P+++ YS++IDG CK   + 
Sbjct: 185 ALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVN 244

Query: 406 DGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           D F LY  M+ +G+ P                              N+  ++ L+ G   
Sbjct: 245 DAFDLYSEMVSKGISP------------------------------NVVTYSALISGFFT 274

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           + +  D V LF  M   NIKPDV T  +L+      G +S A+ L  +M  RG  P+++T
Sbjct: 275 VGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVT 334

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
           YS+I+  L K   +   + +   ++  G+ P++  Y +L++ L     L+ A  +F  L 
Sbjct: 335 YSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLL 394

Query: 586 DRGLEPDIITYNTIICGYC 604
            +G +  ++TY  +  G+C
Sbjct: 395 VKGYDITVVTYIVMFYGFC 413



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 183/370 (49%), Gaps = 30/370 (8%)

Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
           F+ +     K N++ +S+    F     ++ A  L+N ++  +  P  I ++ ++  L K
Sbjct: 40  FNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVK 99

Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
           +        L      RG+K ++V  + +++ +  +G +  A   + ++L  G+ PN I+
Sbjct: 100 SKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTIT 159

Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
           ++ LIKGLC +G++ +A     +++    + + ++Y +LIDG CK G+ R    L    +
Sbjct: 160 FTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDL----L 215

Query: 416 KRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
           +R            ++G +              + PN+ +++T++DG C+ K   D   L
Sbjct: 216 RR------------VDGKL--------------VQPNVVMYSTIIDGMCKDKHVNDAFDL 249

Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
           +  M    I P+V+T++ LI G  + G L  A+ LF +M+   + PDV T++ ++    K
Sbjct: 250 YSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCK 309

Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
              IS  L +   M   G  P+I  Y+ +L+ L K   +D A+ L  +L D+G+ P++ T
Sbjct: 310 SGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHT 369

Query: 596 YNTIICGYCS 605
           Y  +I G C+
Sbjct: 370 YTILIDGLCT 379



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 198/415 (47%), Gaps = 30/415 (7%)

Query: 19  YCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSD 78
           Y S S T  S+   + A ++   L++ N   PAI+F K   + V S +   ++++  + +
Sbjct: 55  YSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKME 114

Query: 79  MRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYM 138
            R +  ++ +                        C+   LI  + ++G I  +  +FA +
Sbjct: 115 FRGIKPNLVN------------------------CN--ILINCFCQLGLIPFAFSVFAKI 148

Query: 139 SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVI 194
             MG   +      L+  L     + Q       +   GF      Y  L++GL + G  
Sbjct: 149 LKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGET 208

Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
             A  + R+V  +   PN+V  + I+  +C +  + +A  L+  ++  G  PNVVT+S L
Sbjct: 209 RAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 268

Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
           I+ F    KL+ A  L+N M+  ++ PD+  ++IL+D   K+G++    +L+    DRG 
Sbjct: 269 ISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQ 328

Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
             ++V +SS++DA      V +AV    ++ + G  PN+ +Y+ILI GLC  G+L +A  
Sbjct: 329 PPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARN 388

Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
           +F  +L++  + +++TY  +  GFCK G   +  +L   M + G  PDA    L+
Sbjct: 389 IFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443



 Score = 42.7 bits (99), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 43/190 (22%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           ++ L++ + + GKI  ++++   M D G    P++V    ++  L  ++ V +   L   
Sbjct: 300 FNILVDVFCKSGKISYALKLVDEMHDRG--QPPNIVTYSSILDALCKTHRVDKAVALLTK 357

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           ++ +G       Y  L++GL   G +E+                                
Sbjct: 358 LKDQGIRPNMHTYTILIDGLCTSGKLED-------------------------------- 385

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
              A ++F+ LL+ G    VVT+  +   FCK+   ++A  L + M E   +PD   Y +
Sbjct: 386 ---ARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYEL 442

Query: 289 LIDGLFKAGR 298
           +   LFK G 
Sbjct: 443 IKLSLFKKGE 452



 Score = 42.4 bits (98), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 37/177 (20%)

Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
           N  + DA+  F   +R    P    FN ++    + K     + L   M    IKP+++ 
Sbjct: 65  NNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVN 124

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL-FKGKNISVGLHMFKLM 549
             +LI      G +  A  +F ++LK G  P+ IT++ +I GL  KG+            
Sbjct: 125 CNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQ------------ 172

Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
                                   +  AL    +L   G + + I+Y T+I G C +
Sbjct: 173 ------------------------IHQALNFHDKLVALGFQFNQISYGTLIDGLCKV 205


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 208/420 (49%), Gaps = 6/420 (1%)

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           R G    + H+   ++++G+ P+++ C K++K       I  A  + ++L   G +P+V 
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            ++ LIN FCK  +++ A ++ + M   D  PD + Y+I+I  L   G+L    ++L   
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           L    +  V+ ++ +++A +  G V  A++  D ML+ G  P++ +Y+ +I+G+C++G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
             A  +   + ++  EP +++Y+ L+      GK  +G  L   M      P+ V  S+L
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 430 I-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I     +G + +A+          L P+ + ++ L+   CR  R    ++    M     
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PD++ +  ++  +   G    A+ +F ++ + G +P+  +Y+ +   L+   +    LH
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M   M  NG+ PD   YN +++ L +E  +D A +L   +      P ++TYN ++ G+C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 199/405 (49%), Gaps = 5/405 (1%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           +++++   P++   N ++   C   +I +A+ + D +      P+ VT++ +I + C   
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           KL+ A ++ N ++  +  P +I Y+ILI+     G + E  +L+   L RGLK D+  ++
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++      G V RA +    +   G  P+VISY+IL++ L  QG+  E   L  ++   
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDA 437
           + +P+++TYS LI   C+ GK+ +  +L   M ++GL PDA     LI      G +  A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           + F    +    +P++  +NT++   C+  +A   +++F  +G     P+  ++  +   
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           + S G    A+ +  +M+  G+ PD ITY+++I  L +   +     +   M      P 
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +  YN++L    K   ++ A+ +   +   G  P+  TY  +I G
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 191/394 (48%), Gaps = 11/394 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NG  +   I++A  +  ++  + F P+ VT N ++  LC  G++  A  + + L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L    +P V+T++ LI A   E  +++A +L + M+   L PD+  Y+ +I G+ K G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               E++     +G + DV+ ++ ++ A +  G      +   +M +    PNV++YSIL
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC+ G++ EA  L   +  + L P   +Y  LI  FC+ G+L       + MI  G 
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 420 KPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD      V+ +L  NG    AL  F +   +   PN   +NT+      L  + D ++
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA---LWSSGDKIR 456

Query: 475 -LFMLMGMYN--IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            L M++ M +  I PD IT+  +I  +  +G +  A  L   M      P V+TY+ ++ 
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           G  K   I   +++ + M  NG  P+   Y VL+
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 188/392 (47%), Gaps = 6/392 (1%)

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           KI  R C +G    +  L + ++  G  P+V+  + LI  F     + KA ++  ++ + 
Sbjct: 94  KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              PD+  Y+ LI+G  K  R+ +   +L     +    D V ++ ++ +    G +  A
Sbjct: 154 G-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++  +++L+    P VI+Y+ILI+    +G + EA  L  ++L R L+P + TY+++I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPN 452
            CK G +   F +  N+  +G +PD +  ++L+  L+      +  +   +       PN
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  ++ L+   CR  +  + + L  LM    + PD  ++  LI     +G L  AI    
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            M+  G  PD++ Y+ ++  L K       L +F  +   G +P+ + YN + + L    
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +   AL +  ++   G++PD ITYN++I   C
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLC 484



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 192/407 (47%), Gaps = 13/407 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  + ++ +ID++  +   M       SPD V    ++  L     +    K+   
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKD--FSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +           Y  L+   + +G ++ A  +  +++ RG  P++ T N I++ +C  G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +   L L G +P+V++++ L+ A   + K E+  +L   M      P+++ YSI
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L + G+++E   LL    ++GL  D   +  ++ A+   G +  A++  + M++ G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP++++Y+ ++  LC+ G+  +A  +FG++      P+  +Y+++      SG      
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +   M+  G+ PD +  + +I+     G++ +A             P++  +N ++ G 
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILL 510
           C+  R  D + +   M     +P+  T+TVLI GI   G  + A+ L
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/427 (22%), Positives = 193/427 (45%), Gaps = 14/427 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG 175
           LI+ +  +  I ++V +   +   G    PD+     L++     N +    ++   MR 
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG---QPDVFAYNALINGFCKMNRIDDATRVLDRMRS 186

Query: 176 KGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           K F      Y  ++  L  +G ++ A  +  Q++     P ++T   +++   + G +  
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDE 246

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L D +L  G KP++ T++T+I   CKE  +++AF++   +      PD+I Y+IL+ 
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLR 306

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L   G+ +EG +L+          +VV +S ++      G +  A+     M   G  P
Sbjct: 307 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  SY  LI   C++GRL  A      ++     P ++ Y++++   CK+GK      ++
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426

Query: 412 DNMIKRGLKPDAVVCSLLINGLM--GDALRFFFQSVRMT---LIPNLFIFNTLMDGCCRL 466
             + + G  P++   + + + L   GD +R     + M    + P+   +N+++   CR 
Sbjct: 427 GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
               +  +L + M      P V+T+ +++ G      +  AI +   M+  G  P+  TY
Sbjct: 487 GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTY 546

Query: 527 SAIIHGL 533
           + +I G+
Sbjct: 547 TVLIEGI 553



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/343 (21%), Positives = 154/343 (44%), Gaps = 43/343 (12%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
           Y+ LIE  +  G +DE++++   M   G  L PD+     ++  +     V + +++ R 
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRG--LKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +  KG       Y  L+  LL +G  E    +  ++      PN+VT + ++  LC +G+
Sbjct: 289 LELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           I  A +L  ++   G  P+  ++  LI AFC+E +L+ A +    M+    +PD++ Y+ 
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408

Query: 289 LIDGLFKAGRLKEGNE-----------------------------------LLLTALDRG 313
           ++  L K G+  +  E                                   ++L  +  G
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
           +  D + ++S++      G V  A +    M +  F P+V++Y+I++ G C+  R+ +A 
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528

Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK 416
            +   ++     P+  TY+ LI+G   +G   +   L +++++
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G+   ++ L   M+++G  PDVI  + +I G F  +NI   + + +++E+ G  PD+  
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFA 160

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           YN L+N   K   +D A ++  ++  +   PD +TYN +I   CS
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 82/173 (47%), Gaps = 4/173 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           +Y+ ++    + GK D+++EIF  + ++G   +      + S L  S    +   +   M
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G       Y  +++ L R+G+++ AF +   +    F P++VT N +L   C   +I
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
            +A ++ + ++  G +PN  T++ LI          +A +L N ++ +D + +
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE 577



 Score = 42.4 bits (98), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           I H   +  N    LH+ + M R G  PD+ +   L+       N+  A+++   L   G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 589 LEPDIITYNTIICGYCSLN 607
            +PD+  YN +I G+C +N
Sbjct: 155 -QPDVFAYNALINGFCKMN 172


>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 376

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 188/357 (52%), Gaps = 12/357 (3%)

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C+   ++ A ++Y  ++E  + PD ++Y+ +++G F+  ++K+  EL     + G +  V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEGNR-SV 59

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
             F+ +M      G V   +  ++ M    F+ + I+Y IL+ G C+ G + ++  +   
Sbjct: 60  SSFNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEM 119

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG--- 435
              +        YS++I+G CK   L    S+ ++MIK G KP+A V + LINGL+G   
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 436 --DALRFFFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDTVKLFMLMGMYNIKPDVIT 490
             DA+R F +   +   P +  +NTL++G C+      A D VK  +  G+    P VIT
Sbjct: 180 FEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGL---NPSVIT 236

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
           +++L++G+     +  A+ L+ Q++ +G  PDV  ++ +IHGL         L ++  M 
Sbjct: 237 YSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMN 296

Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           R   AP++  +N L+    K+ ++  AL ++ ++   GLEPDII+YN  + G CS N
Sbjct: 297 RWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCN 353



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 175/346 (50%), Gaps = 10/346 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++  Y R+ KI +  E++  M + G   S      +M  L D   V +   +   M+
Sbjct: 28  YNTMLNGYFRVAKIKDCFELWEMMGNEG-NRSVSSFNIMMRGLFDXGKVDEVISIWELMK 86

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
              F      Y  L++G  + G I  + H+     Q+G V +    + ++  LC    + 
Sbjct: 87  KSDFVEDSITYGILVHGFCKNGXINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLD 146

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+ + ++  G KPN   ++TLIN     +K E A +++  M  +   P +I Y+ LI
Sbjct: 147 KAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVHCSPTIITYNTLI 206

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K     E  +L+   L++GL   V+ +S +M        V RA+Q ++++++ GF 
Sbjct: 207 NGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFK 266

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V  ++ILI GLC  G+   A  L+  +   +  P+L+T+++L++GF K G +R+   +
Sbjct: 267 PDVQMHNILIHGLCSVGKTQRALSLYFXMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVI 326

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIP 451
           +  +++ GL+PD +  ++ + GL       DA+ F   SVR  ++P
Sbjct: 327 WARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDSVRKKIVP 372



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 169/349 (48%), Gaps = 39/349 (11%)

Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQL------------- 270
           C +G I  A  ++  ++     P+ V ++T++N + + AK++  F+L             
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEGNRSVS 60

Query: 271 ---------------------YNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
                                + LM + D V D I Y IL+ G  K G + +   +L  A
Sbjct: 61  SFNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEMA 120

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
             +G  LD   +S++++      ++ +AV   + M+  G  PN   Y+ LI GL    + 
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKF 180

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  +F ++      P+++TY++LI+G CK+    + + L   M+++GL P  +  S+L
Sbjct: 181 EDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSML 240

Query: 430 INGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           + GL  D     AL+ + Q +     P++ + N L+ G C + +    + L+  M  +  
Sbjct: 241 MKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRWKC 300

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
            P+++TH  L+ G    G + +A++++ ++L+ GL PD+I+Y+  + GL
Sbjct: 301 APNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGL 349



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 175/351 (49%), Gaps = 6/351 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  ++NG  R   I++ F +   +   G   ++ + N +++ L   G++    S+++++
Sbjct: 27  VYNTMLNGYFRVAKIKDCFELWEMMGNEGN-RSVSSFNIMMRGLFDXGKVDEVISIWELM 85

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
                  + +T+  L++ FCK   + K+  +  +  +   V D   YS +I+GL K   L
Sbjct: 86  KKSDFVEDSITYGILVHGFCKNGXINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 145

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   +L   +  G K +  V++++++  VG      A++ +  M      P +I+Y+ L
Sbjct: 146 DKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVHCSPTIITYNTL 205

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+     EA  L  ++L + L PS++TYS L+ G C   K+     L++ +I +G 
Sbjct: 206 INGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGF 265

Query: 420 KPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KPD  + ++LI+GL        AL  +F   R    PNL   NTLM+G  +     + + 
Sbjct: 266 KPDVQMHNILIHGLCSVGKTQRALSLYFXMNRWKCAPNLVTHNTLMEGFYKDGDIRNALV 325

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           ++  +    ++PD+I++ + ++G+ S   +  AIL     +++ + P  IT
Sbjct: 326 IWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDSVRKKIVPTKIT 376



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 137/281 (48%), Gaps = 6/281 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L+  + + G I++S+ +       G  L       +++ L    ++ +   +   M 
Sbjct: 97  YGILVHGFCKNGXINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMI 156

Query: 175 GKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
             G C     VY  L+NGL+     E+A  + R++      P I+T N ++  LC N   
Sbjct: 157 KSG-CKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMF 215

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
           G A  L   +L  G  P+V+T+S L+   C + K+E+A QL+N ++     PD+ +++IL
Sbjct: 216 GEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNIL 275

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           I GL   G+ +    L           ++V  +++M+ +   GD+  A+  + R+L  G 
Sbjct: 276 IHGLCSVGKTQRALSLYFXMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGL 335

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            P++ISY+I +KGLC   R+ +A       + +++ P+ +T
Sbjct: 336 EPDIISYNITLKGLCSCNRICDAILFLHDSVRKKIVPTKIT 376


>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 200/418 (47%), Gaps = 9/418 (2%)

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
           H    Q GF P+  +CN +   L   G    A S  D      PKP   +    I   CK
Sbjct: 148 HWLSSQSGFSPDSSSCNVLFDALVEAGACNAAKSFLDSTNF-NPKP--ASLEAYIRCLCK 204

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
              +E+A  ++  +  + +   +  ++ ++ G  +AGR+    EL    ++  +  DV  
Sbjct: 205 GGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHT 264

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
              ++ A+     +        R+L  G +P   +++ LI G C+         L   ++
Sbjct: 265 VGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMI 324

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
            R   P + TY  +++G CK GK  +GF ++ ++  RG  PD V+ + +I+GL     +G
Sbjct: 325 ARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLG 384

Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
           DA + +F+ ++   +PN + +N ++ G  ++    +  K++  M         +++ V+I
Sbjct: 385 DARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMI 444

Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
           +G+ S G +  A  LF +M  +G+  + ITY+A++ G  K   I  G ++   +   G+ 
Sbjct: 445 KGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQ 504

Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
           P  A Y  L++ L +E ++  A  L+  + +RG+EP + T++ +I G+C    C ++G
Sbjct: 505 PSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCK-QGCAMEG 561



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/466 (22%), Positives = 205/466 (43%), Gaps = 34/466 (7%)

Query: 147 PDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHR 202
           P  ++  + CL     V +   +   ++G G C     +  ++ G +R G I+  + ++ 
Sbjct: 192 PASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYG 251

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++++   V ++ T   +++  C   +I +  +L   +L  G  P    F+ LI+ FCK+ 
Sbjct: 252 EMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDK 311

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
              +   L + M+  +  PD+  Y  +++GL K G+  EG  +     DRG   D V+++
Sbjct: 312 AYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYT 371

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++     +  +G A + +  M+  GFLPN  +Y+ +I G  + G L EA  ++ ++  +
Sbjct: 372 TMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDK 431

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
                 ++Y+ +I G C  GK+++   L++ M  +G+                       
Sbjct: 432 GYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGI----------------------- 468

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
                  + N   +N L+ G C+  +  +   L   +    I+P   ++  LI  +  +G
Sbjct: 469 -------LRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEG 521

Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
            + +A +L+  M  RG+ P V T+  +I G  K      G+     M R+ + P    + 
Sbjct: 522 DMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFE 581

Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
            L+  L +   LD AL +   +   G    I   N+++   C  NS
Sbjct: 582 SLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCEKNS 627



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/464 (21%), Positives = 208/464 (44%), Gaps = 38/464 (8%)

Query: 119 IENYVRI----GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           +E Y+R     G ++E++ +F  +  +G+  S      ++   V +  +   ++L   M 
Sbjct: 195 LEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMV 254

Query: 175 GKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                       +L+     +  I +  ++ R+V++ G VP     NK++   C +   G
Sbjct: 255 ESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYG 314

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
             S L   ++     P++ T+  ++N  CK  K  + F+++  + +    PD ++Y+ +I
Sbjct: 315 RVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMI 374

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL +   L +  +L    + +G   +   +++++  Y  IG++  A + Y  M + G+ 
Sbjct: 375 HGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYG 434

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
              +SY+++IKGLC  G++ EA  LF ++  + +  + +TY++L+ GFCK GK+ +G +L
Sbjct: 435 EKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANL 494

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
              ++ +G++P A                                +  L+D  C+     
Sbjct: 495 LYELLDQGIQPSAAS------------------------------YAPLIDKLCQEGDMQ 524

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
           +   L+  M    ++P V TH  +I G   QG     +     ML+  L P   ++ ++I
Sbjct: 525 NAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLI 584

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
             L +   +   L +   M + G    I+I N L+  L ++ +L
Sbjct: 585 QCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCEKNSL 628


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 209/403 (51%), Gaps = 13/403 (3%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
             G C+    +NGL + G    A    +++++R   PN+V  N IL  LC  G +G A  
Sbjct: 154 ANGLCI----VNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALG 209

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKE-AKLEKAFQLYNLMM-EMDLVPDLIIYSILIDG 292
           LF  + +V  +PNVVT++ LI   C E     +   L+N M+ E  +VPD+  +SIL++G
Sbjct: 210 LFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNG 269

Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG--FL 350
             K G L     ++   +  G++L+VV ++S++  Y     +  AV+ +D M+  G   L
Sbjct: 270 FCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCL 329

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P+V++Y+ LI G C+  ++ +A  L  +++ + L+P + T++SLI GF + GK      L
Sbjct: 330 PSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKEL 389

Query: 411 YDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
           +  M  +G  P    C+++++GL       +A+  F    +  L  ++ I+N ++DG C+
Sbjct: 390 FITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCK 449

Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           + +  D  KL   + +  +K D  T  ++I+G+  +G L  A  L  +M + G  P+  +
Sbjct: 450 MGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCS 509

Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
           Y+  + GL +  +IS      ++M+  G   D     +L+  L
Sbjct: 510 YNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFL 552



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 214/420 (50%), Gaps = 17/420 (4%)

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK-PNVVTFSTLINAFC 259
           HR +    F P I   N +   +  +     A SL   L  +G +  +V T + LIN  C
Sbjct: 65  HRMLTLNPF-PCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCLC 123

Query: 260 KEAKLEKAFQLYNLMMEMDLVPDLIIYSIL------IDGLFKAGRLKEGNELLLTALDRG 313
           +  K    F +  LM ++ L P L+  + +      ++GL K G      E L   + R 
Sbjct: 124 RLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKRN 183

Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQ-GRLVEA 372
           L+ +VVV+++++D     G VG A+  +  M      PNV++Y+ LI+GLC + G   E 
Sbjct: 184 LEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREG 243

Query: 373 CGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
            GLF +++  + + P + T+S L++GFCK G L    S+   MI+ G++ + V  + LI+
Sbjct: 244 VGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLIS 303

Query: 432 GL-----MGDALRFFFQSVRMT--LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           G      M +A+R F   VR     +P++  +N+L+ G C++K+    + L   M    +
Sbjct: 304 GYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGL 363

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PDV T T LI G    G   +A  LF  M  +G  P + T + ++ GL+K    S  + 
Sbjct: 364 DPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMT 423

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +F+ ME++G+  DI IYN++L+ + K   L+ A KL   +  +GL+ D  T+N +I G C
Sbjct: 424 LFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLC 483



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 170/350 (48%), Gaps = 9/350 (2%)

Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRK--GVIENAFHMHRQVIQRGFVPNIVTCNK 218
            ++G +Y++           Y  L+ GL  +  G  E     +  V ++G VP++ T + 
Sbjct: 206 EALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSI 265

Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
           ++   C  G +  A S+   ++ +G + NVVT+++LI+ +C   ++E+A ++++LM+   
Sbjct: 266 LVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREG 325

Query: 279 --LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
              +P ++ Y+ LI G  K  ++ +   LL   + +GL  DV  ++S++  +  +G    
Sbjct: 326 EGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLA 385

Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
           A + +  M + G +P + + ++++ GL +     EA  LF  +    L+  ++ Y+ ++D
Sbjct: 386 AKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLD 445

Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIP 451
           G CK GKL D   L   ++ +GLK D+   +++I      GL+ DA     +       P
Sbjct: 446 GMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPP 505

Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
           N   +N  + G  R    + + K   +M       D  T  +LIR +++ 
Sbjct: 506 NKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFLSAN 555



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 130/278 (46%), Gaps = 29/278 (10%)

Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE-PSLLTYS 392
           V  +V  + RML     P +  +++L   + +      A  L   +     E   + T +
Sbjct: 57  VSVSVDFFHRMLTLNPFPCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLN 116

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPN 452
            LI+  C+  K   GF++   M K GL+P  V  + + NGL                   
Sbjct: 117 ILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGL------------------- 157

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
                 +++G C++   +  ++    M   N++P+V+ +  ++ G+  +G +  A+ LF+
Sbjct: 158 -----CIVNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFY 212

Query: 513 QMLKRGLTPDVITYSAIIHGL---FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
           +M    + P+V+TY+ +I GL     G    VGL    + E+ G+ PD+  +++L+N   
Sbjct: 213 EMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEK-GIVPDVQTFSILVNGFC 271

Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
           KE  L  A  + G +   G+E +++TYN++I GYC  N
Sbjct: 272 KEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRN 309



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 31/206 (15%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           ++ LI  +  +GK   + E+F  M D G       V  L +C V                
Sbjct: 370 WTSLIGGFFEVGKPLAAKELFITMKDQG------QVPILQTCAV---------------- 407

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
                    +++GL +  +   A  + R + + G   +IV  N +L  +C  G++ +A  
Sbjct: 408 ---------VLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARK 458

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L   +L+ G K +  T++ +I   C+E  L+ A +L   M E    P+   Y++ + GL 
Sbjct: 459 LLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLL 518

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVV 320
           +   +    + L    D+G  +D   
Sbjct: 519 RKYDISRSRKYLQIMKDKGFPVDATT 544


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 196/404 (48%), Gaps = 11/404 (2%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
            P++ T N +L  L   G +   + LF  +     KP++VT+  L+N  CK   +  A +
Sbjct: 128 APDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALK 187

Query: 270 LYNLMME--MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR--GLKLDVVVFSSVM 325
           + + M     D+  D++I + ++DGL K GRL++    +   + +  G   + V ++ + 
Sbjct: 188 VLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLA 247

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
           DA   +GD+  A Q  +RM   G  PNVI+ + ++ GLC+ GR+  A   F +     LE
Sbjct: 248 DACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLE 307

Query: 386 P--SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DAL 438
              + +TYS+L+  F     +     L+  M  +G  PDAV+   +I+GL       DA 
Sbjct: 308 ARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDAC 367

Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
                  +     +   +N L+ G CR KR  +  +LF  M    ++PDV T+  L+  +
Sbjct: 368 NIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCL 427

Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
              G  S+   L   M+  G  P V+T+  ++HG  K       L +F+ M    + P+ 
Sbjct: 428 CKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNT 487

Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            IYN L++ L K   +D A+KLF ++ +  +  ++ TYN ++ G
Sbjct: 488 VIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKG 531



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 137/609 (22%), Positives = 253/609 (41%), Gaps = 97/609 (15%)

Query: 23  SKTHISDLQFNQANAILANLIKTNNPTPA-IQFFKWTHNCVS-------------SPNIA 68
           S T         A AILA+L+  + P+ A +   + +    S             +P   
Sbjct: 22  SSTSSPTPNTPNATAILADLLHGHTPSTATLSLLRASPGLASELYGLIGEPSHAFTPASL 81

Query: 69  QLIHVLLQSD-MRDVASHVFDKMVIQFGKTYNFFRLFRDSL--GDFGCDYSF---LIENY 122
             +H L     +   ++ +  K++ +F    +     RDSL  G    D S    L+   
Sbjct: 82  ATLHSLAARHCIPPPSASLLSKLLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSAL 141

Query: 123 VRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
            R G +    E+F  M +  +   PD+V                              Y 
Sbjct: 142 GRAGNLRGMTELFTSMREASV--KPDIV-----------------------------TYG 170

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRG--FVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
            L+N L + G++ +A  +  ++   G     +IV  N ++  LC  G++ +A    D  +
Sbjct: 171 ILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERM 230

Query: 241 --LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
             + G  PN VT++ L +A C+   ++ A Q+   M +  + P++I  + ++ GL + GR
Sbjct: 231 RQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGR 290

Query: 299 L-------KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
           +       +E     L A  RG   + V +S+++ A++   +V  A++ +  M + G+ P
Sbjct: 291 VGAALDFFREKRTTWLEA--RG---NAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPP 345

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           + + Y  +I GL Q GRLV+AC +   +     +     Y+ LI GFC+  +L +   L+
Sbjct: 346 DAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLF 405

Query: 412 DNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATD 471
           + M   GL+PD                              ++ +NTL+   C+    + 
Sbjct: 406 EEMKGAGLQPD------------------------------VYTYNTLLSCLCKAGDFSA 435

Query: 472 TVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
             +L   M     +P V+T   L+ G    G    A+ +F  M +  + P+ + Y+ +I 
Sbjct: 436 VDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLID 495

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEP 591
            L K + + V + +F  M  N V  ++  YN LL  L  +   + A +L  Q+ +    P
Sbjct: 496 FLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTP 555

Query: 592 DIITYNTII 600
           D +T + ++
Sbjct: 556 DYVTMDVLM 564



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 207/453 (45%), Gaps = 45/453 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQYYK----L 169
           Y  L+    + G + +++++   MS  G  +  D+V  +++ +VD    +G+       +
Sbjct: 169 YGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIV--ILNTVVDGLCKIGRLQDAIVFV 226

Query: 170 CRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
              MR    C      Y  L +   R G I+ A  +  ++ + G  PN++T N I+  LC
Sbjct: 227 DERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLC 286

Query: 225 INGQIGNASSLF--DVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
             G++G A   F       +  + N VT+STL++AF     +  A +L++ M +    PD
Sbjct: 287 RVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPD 346

Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
            ++Y  +I GL +AGRL +   +  +    G KLD   ++ ++  +     +  A Q ++
Sbjct: 347 AVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFE 406

Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
            M   G  P+V +Y+ L+  LC+ G       L G ++    +PS++T+ +L+ G+CK+G
Sbjct: 407 EMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAG 466

Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           K  +   ++ +                    MG+A           + PN  I+NTL+D 
Sbjct: 467 KTDEALKIFRS--------------------MGEA----------RIQPNTVIYNTLIDF 496

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C+ +     +KLF  M   N+  +V T+  L++G+  +     A  L  QM +   TPD
Sbjct: 497 LCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPD 556

Query: 523 VITYSAIIHGLFK-GKNISVGLHMFKLMERNGV 554
            +T   ++  L + G+   +   M +  E+ G 
Sbjct: 557 YVTMDVLMEWLPEIGETERLKCFMEQRDEKGGA 589



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 179/374 (47%), Gaps = 17/374 (4%)

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
           P P+    S L+  F   A  + A  L + +      PD+  ++ L+  L +AG L+   
Sbjct: 94  PPPSASLLSKLLARFSSPA--DAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMT 151

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG--FLPNVISYSILIK 361
           EL  +  +  +K D+V +  +++     G VG A++  DRM + G     +++  + ++ 
Sbjct: 152 ELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVD 211

Query: 362 GLCQQGRLVEACGLFGQVLIRRLE---PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
           GLC+ GRL +A  +F    +R++    P+ +TY+ L D  C+ G +     + + M K G
Sbjct: 212 GLCKIGRLQDAI-VFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEG 270

Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP---NLFIFNTLMDGCCRLKRAT 470
           + P+ +  + ++ GL     +G AL FF +  R T +    N   ++TL+          
Sbjct: 271 VTPNVITMNTIVGGLCRVGRVGAALDFFREK-RTTWLEARGNAVTYSTLVSAFLHCNNVA 329

Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
             ++LF  M      PD + +  +I G+   G L  A  +   M K G   D   Y+ +I
Sbjct: 330 LAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILI 389

Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
            G  + K +     +F+ M+  G+ PD+  YN LL+ L K  +  A  +L G + D G +
Sbjct: 390 GGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQ 449

Query: 591 PDIITYNTIICGYC 604
           P ++T+ T++ GYC
Sbjct: 450 PSVVTFGTLVHGYC 463



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 5/135 (3%)

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL-TPDVITYSAIIHGL 533
           L  L   + I P   + ++L + +A   S + A       L  G   PDV T+++++  L
Sbjct: 84  LHSLAARHCIPPP--SASLLSKLLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSAL 141

Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE--P 591
            +  N+     +F  M    V PDI  Y +LLN L K   +  ALK+  +++  G +   
Sbjct: 142 GRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCA 201

Query: 592 DIITYNTIICGYCSL 606
           DI+  NT++ G C +
Sbjct: 202 DIVILNTVVDGLCKI 216


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 184/387 (47%), Gaps = 30/387 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  L+   L  G + +A   +R   +  F     TC K+L+ +            ++ +
Sbjct: 57  VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEI 116

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   ++  F+ L++ FCKE  +  A  ++N + +  L P ++ ++ L++G  + G L
Sbjct: 117 LECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDL 176

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            EG  L       G++ DV  +S +++       +  A + +D ML+ G +PN ++++ L
Sbjct: 177 DEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTL 236

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+ GR+  A  ++ Q+L + L P L+TY++LI G CK G L+    L D M  +GL
Sbjct: 237 IDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 296

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           KPD +                               + TL+DGCC+        +    M
Sbjct: 297 KPDKIT------------------------------YTTLIDGCCKEGDLETAFEHRKRM 326

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              NI+ D + +T LI G+  +G    A  +  +ML  GL PD  TY+ II+   K  ++
Sbjct: 327 IQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDV 386

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLN 566
             G  + K M+R+G  P +  YNVL+N
Sbjct: 387 WTGSKLLKEMQRDGHVPSVVTYNVLMN 413



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 177/332 (53%), Gaps = 30/332 (9%)

Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
           + ++++ G+  ++   N ++ R C  G I  A S+F+ +   G +P+VV+F+TL+N + +
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 172

Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
              L++ F+L + M    + PD+  YS+LI+GL K  ++ + NEL    LD+GL  + V 
Sbjct: 173 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 232

Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
           F++++D +   G V  A++ Y +ML+    P++I+Y+ LI GLC++G L +A  L  ++ 
Sbjct: 233 FTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 292

Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRF 440
           ++ L+P  +TY++LIDG CK G L   F     MI+  ++ D V  + LI+GL       
Sbjct: 293 MKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL------- 345

Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
                                  C+  R  D  K+   M    +KPD  T+T++I     
Sbjct: 346 -----------------------CQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCK 382

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
           +G + +   L  +M + G  P V+TY+ +++G
Sbjct: 383 KGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 142/249 (57%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
           LMNG +R G ++  F +   +   G  P++ T + ++  LC   ++ +A+ LFD +L  G
Sbjct: 166 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG 225

Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
             PN VTF+TLI+  CK  +++ A ++Y  M+   L PDLI Y+ LI GL K G LK+ +
Sbjct: 226 LVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 285

Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
           +L+     +GLK D + +++++D     GD+  A +   RM+      + ++Y+ LI GL
Sbjct: 286 DLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL 345

Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
           CQ+GR ++A  +  ++L   L+P   TY+ +I+ FCK G +  G  L   M + G  P  
Sbjct: 346 CQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 405

Query: 424 VVCSLLING 432
           V  ++L+NG
Sbjct: 406 VTYNVLMNG 414



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 183/383 (47%), Gaps = 13/383 (3%)

Query: 230 GNASSLFDVLLLVG--PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           G+AS++F  +L      + ++  FS LI A+ +   L  A + Y L  E           
Sbjct: 35  GSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCR 94

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +++ + K    K         L+ G    +  F+ +M  +   GD+  A   ++ +   
Sbjct: 95  KVLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKW 154

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V+S++ L+ G  + G L E   L   +    ++P + TYS LI+G CK  K+ D 
Sbjct: 155 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 214

Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+D M+ +GL P+ V  + LI+G         A+  + Q +  +L P+L  +NTL+ G
Sbjct: 215 NELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 274

Query: 463 CCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
            C+   LK+A D   L   M M  +KPD IT+T LI G   +G L +A     +M++  +
Sbjct: 275 LCKKGDLKQAHD---LIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENI 331

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             D + Y+A+I GL +         + + M   G+ PD   Y +++N   K+ ++    K
Sbjct: 332 RLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSK 391

Query: 580 LFGQLTDRGLEPDIITYNTIICG 602
           L  ++   G  P ++TYN ++ G
Sbjct: 392 LLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 163/328 (49%), Gaps = 5/328 (1%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+ ++S LI    ++G L++  E      +    +       V++  + +         Y
Sbjct: 54  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFY 113

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + +L  G+  ++  ++IL+   C++G +  A  +F  +    L PS++++++L++G+ + 
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L +GF L   M   G++PD    S+LINGL     M DA   F + +   L+PN   F
Sbjct: 174 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 233

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  R    ++++  M   ++ PD+IT+  LI G+  +G L  A  L  +M  
Sbjct: 234 TTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 293

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL PD ITY+ +I G  K  ++       K M +  +  D   Y  L++ L +E     
Sbjct: 294 KGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLD 353

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+  ++   GL+PD  TY  II  +C
Sbjct: 354 AEKVLREMLSAGLKPDTGTYTMIINEFC 381



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 193/414 (46%), Gaps = 22/414 (5%)

Query: 58  THNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSF 117
           TH  +S      LI V++    +  AS VF  ++   G   +   +F           S 
Sbjct: 14  THQMLSEAK--SLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF-----------SG 60

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV----GQYYKLCRAM 173
           LI  Y+  G + +++E +    +   ++  D  ++++  ++         G Y ++    
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECG 120

Query: 174 RGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
                  +  LM+   ++G I  A  +   + + G  P++V+ N ++      G +    
Sbjct: 121 YPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 180

Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
            L   +   G +P+V T+S LIN  CKE+K++ A +L++ M++  LVP+ + ++ LIDG 
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 240

Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
            K+GR+    E+    L + L  D++ +++++      GD+ +A    D M   G  P+ 
Sbjct: 241 CKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 300

Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
           I+Y+ LI G C++G L  A     +++   +    + Y++LI G C+ G+  D   +   
Sbjct: 301 ITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLRE 360

Query: 414 MIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
           M+  GLKPD    +++IN     G +    +   +  R   +P++  +N LM+G
Sbjct: 361 MLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 53/122 (43%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           + D+   + LI      G L  AI  +    +        T   ++  + K K   +   
Sbjct: 52  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWG 111

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            ++ +   G    +  +N+L++   KE ++  A  +F  +T  GL P ++++NT++ GY 
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYI 171

Query: 605 SL 606
            L
Sbjct: 172 RL 173


>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
          Length = 689

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/571 (24%), Positives = 250/571 (43%), Gaps = 83/571 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  Y  IG ++    +   MS+ G+  +      L+        + +   +   ++
Sbjct: 49  YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 108

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K       +Y  LM+G  R G I +A  +H  +I+ G   N   CN ++   C +GQ+ 
Sbjct: 109 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 168

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F  +     KP+  T++TL++ +C+   +++A +L + M + ++VP ++ Y+IL+
Sbjct: 169 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 228

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G   +   L    L RG+  D +  S++++A   +GD   A++ ++ +L  G L
Sbjct: 229 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 288

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS- 409
            + I+ +++I GLC+  ++ EA  +   V I R +P++ TY +L  G+ K G L++ F+ 
Sbjct: 289 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 348

Query: 410 --------------LYDNMIK--------------------RGLKPDAVVCSLLING--- 432
                         +Y+ +I                     RGL P       LI G   
Sbjct: 349 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 408

Query: 433 --LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF--------MLMGMY 482
             ++  A    F+ +   +  N+ I + + +   RL +  +   L         +L G  
Sbjct: 409 IGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ 468

Query: 483 NIK------------------------------PDVITHTVLIRGIASQGSLSSAILLFF 512
           ++K                              P+ I + V I G+   G L  A  LF 
Sbjct: 469 SLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFS 528

Query: 513 QMLKRG-LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +L      PD  TY+ +IHG     +I+    +   M   G+ P+I  YN L+  L K 
Sbjct: 529 DLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKL 588

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            N+D A +L  +L  +G+ P+ ITYNT+I G
Sbjct: 589 GNVDRAQRLLHKLPQKGITPNAITYNTLIDG 619



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/523 (24%), Positives = 239/523 (45%), Gaps = 48/523 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L++ Y R G+I ++V +   M ++G+  +  +   L++    S  + +  ++   M 
Sbjct: 119 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 178

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L++G  R G ++ A  +  Q+ Q+  VP ++T N +LK     G   
Sbjct: 179 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 238

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +  SL+ ++L  G   + ++ STL+ A  K     +A +L+  ++   L+ D I  +++I
Sbjct: 239 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 298

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K  ++ E  E+L        K  V  + ++   Y  +G++  A    + M   G  
Sbjct: 299 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 358

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P +  Y+ LI G  +   L +   L  ++  R L P++ TY +LI G+C  G +   ++ 
Sbjct: 359 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 418

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG------------------------DALRFFFQSVR 446
              MI++G+  +  +CS + N L                           +L+ F ++  
Sbjct: 419 CFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASA 478

Query: 447 MT-------------------LIPNLFIFNTLMDGCCRLKRATDTVKLFM-LMGMYNIKP 486
            T                   L+PN  ++N  + G C+  +  D  KLF  L+      P
Sbjct: 479 TTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP 538

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           D  T+T+LI G A  G ++ A  L  +M  +G+ P+++TY+A+I GL K  N+     + 
Sbjct: 539 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 598

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
             + + G+ P+   YN L++ L+K  N+  A++L  ++ ++GL
Sbjct: 599 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 641



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 214/425 (50%), Gaps = 11/425 (2%)

Query: 183 FLMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
            ++N   R G ++ A    ++     G   N+VT N ++    + G +   + +  ++  
Sbjct: 15  IVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSE 74

Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
            G   NVVT+++LI  +CK+  +E+A  ++ L+ E  LV D  +Y +L+DG  + G++++
Sbjct: 75  RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRD 134

Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
              +    ++ G++ +  + +S+++ Y   G +  A Q + RM +    P+  +Y+ L+ 
Sbjct: 135 AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVD 194

Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
           G C+ G + EA  L  Q+  + + P+++TY+ L+ G+ + G   D  SL+  M+KRG+  
Sbjct: 195 GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA 254

Query: 422 DAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
           D + CS L+  L  +GD   A++ +   +   L+ +    N ++ G C++++  +  ++ 
Sbjct: 255 DEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 314

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             + ++  KP V T+  L  G    G+L  A  +   M ++G+ P +  Y+ +I G FK 
Sbjct: 315 DNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKY 374

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
           ++++    +   +   G+ P +A Y  L+        +D A     ++ ++G     IT 
Sbjct: 375 RHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKG-----ITL 429

Query: 597 NTIIC 601
           N  IC
Sbjct: 430 NVNIC 434



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 189/409 (46%), Gaps = 76/409 (18%)

Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL-TALDRGLKLDVVVFSSVMDAYVGIG 332
           M+  ++ PD+   SI+++   ++G + +       T    GL+L+VV ++S+++ Y  IG
Sbjct: 1   MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 60

Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
           DV    +    M   G   NV++Y+ LIKG C++G + EA  +F  +  ++L      Y 
Sbjct: 61  DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 120

Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRM 447
            L+DG+C++G++RD   ++DNMI+ G++ +  +C+ LING      + +A + F +    
Sbjct: 121 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 180

Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA-------- 499
           +L P+   +NTL+DG CR     + +KL   M    + P V+T+ +L++G +        
Sbjct: 181 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 240

Query: 500 ---------------------------SQGSLSSAILLFFQMLKRGLTPDVIT------- 525
                                        G  + A+ L+  +L RGL  D IT       
Sbjct: 241 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISG 300

Query: 526 ----------------------------YSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
                                       Y A+ HG +K  N+     + + MER G+ P 
Sbjct: 301 LCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPT 360

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           I +YN L++   K  +L+    L  +L  RGL P + TY  +I G+C++
Sbjct: 361 IEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNI 409



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 112/269 (41%), Gaps = 51/269 (18%)

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL------LTYSSLIDGFCKSGKL 404
           P+V + SI++   C+ G + +A      V  +  E SL      +TY+SLI+G+   G +
Sbjct: 8   PDVFTCSIVVNAYCRSGNVDKA-----MVFAKETESSLGLELNVVTYNSLINGYAMIGDV 62

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTL 459
                +   M +RG+  + V  + LI G     LM +A   F       L+ +  ++  L
Sbjct: 63  EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 122

Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
           MDG CR                                    G +  A+ +   M++ G+
Sbjct: 123 MDGYCR-----------------------------------TGQIRDAVRVHDNMIEIGV 147

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             +    +++I+G  K   +     +F  M    + PD   YN L++   +   +D ALK
Sbjct: 148 RTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALK 207

Query: 580 LFGQLTDRGLEPDIITYNTIICGYCSLNS 608
           L  Q+  + + P ++TYN ++ GY  + +
Sbjct: 208 LCDQMCQKEVVPTVMTYNILLKGYSRIGA 236



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 114/246 (46%), Gaps = 12/246 (4%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI  +  IG ID++      M + GI L+ ++  ++ + L   + + +   L + + 
Sbjct: 399 YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV 458

Query: 175 G-----KGF-CVYEFL---MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
                  G+  + EFL       L+   I  A  +     ++  VPN +  N  +  LC 
Sbjct: 459 DFDLLLPGYQSLKEFLEASATTCLKTQKI--AESVENSTPKKLLVPNNIVYNVAIAGLCK 516

Query: 226 NGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
            G++ +A  LF  LL      P+  T++ LI+       + KAF L + M    ++P+++
Sbjct: 517 AGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIV 576

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ LI GL K G +     LL     +G+  + + +++++D  V  G+V  A++  ++M
Sbjct: 577 TYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 636

Query: 345 LNGGFL 350
           +  G +
Sbjct: 637 IEKGLV 642


>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           micrantha]
          Length = 431

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 235/491 (47%), Gaps = 72/491 (14%)

Query: 53  QFFKWTHNCVSSP------NIAQLIHVLLQSDMRDVASHVFDKMVIQFGK--TYNFFRLF 104
            FF W  +  +S       +   +IH L    M   A  + + +V + GK      F   
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAV 61

Query: 105 RDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
            ++ G+   D   +S LI  Y+  G + +++E +    +  +++  D  ++++  L+   
Sbjct: 62  LETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL- 120

Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
              +Y+KL          V+ F                 + ++++ G+  ++   N ++ 
Sbjct: 121 ---KYFKL----------VWGF-----------------YEEILECGYPASLYFFNILMH 150

Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
           R C +G I  A S+FD +   G +P+VV+++TL+N + +   L++ F+L + M+   + P
Sbjct: 151 RFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQP 210

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+  YS+LI+GL K  ++   NEL    L +GL  + V F++++D +   G V  A++ Y
Sbjct: 211 DVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 270

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
            +ML+   LP++I+Y+ LI GLC++G L +A  L  ++ ++ L+P   TY++LIDG CK 
Sbjct: 271 KQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKE 330

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMD 461
           G L   F     MI+  ++ D V  + LI+GL                            
Sbjct: 331 GDLDTAFEHRKRMIQENIRLDDVAYTALISGL---------------------------- 362

Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
             C+  R+ D  K+   M    +KPD  T+T++I     +G +     L  +M + G  P
Sbjct: 363 --CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAP 420

Query: 522 DVITYSAIIHG 532
            V+TY+ +++G
Sbjct: 421 SVVTYNVLMNG 431



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 183/387 (47%), Gaps = 30/387 (7%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  L+   L  G + +A   +R   +        TC K+L+ L            ++ +
Sbjct: 74  VFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 133

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   ++  F+ L++ FCK+  +  A  +++ + +  L P ++ Y+ L++G  + G L
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            EG  L    L  G++ DV  +S +++       +  A + +D ML  G +PN ++++ L
Sbjct: 194 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTL 253

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I G C+ GR+  A  ++ Q+L + L P L+TY++LI G CK G L+    L D M  +GL
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 313

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
           KPD                               F + TL+DGCC+        +    M
Sbjct: 314 KPDK------------------------------FTYTTLIDGCCKEGDLDTAFEHRKRM 343

Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
              NI+ D + +T LI G+  +G    A  +  +ML  GL PD  TY+ II+   K  ++
Sbjct: 344 IQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDV 403

Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLN 566
             G  + K M R+G AP +  YNVL+N
Sbjct: 404 WKGSKLLKEMHRDGHAPSVVTYNVLMN 430



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 185/383 (48%), Gaps = 13/383 (3%)

Query: 230 GNASSLFDVLLLV--GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           G+AS++F  +L      + ++  FS LI A+ +   L  A + Y L  E  L        
Sbjct: 52  GSASAVFAAVLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCR 111

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            +++ L K    K         L+ G    +  F+ +M  +   GD+  A   +D +   
Sbjct: 112 KVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKW 171

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G  P+V+SY+ L+ G  + G L E   L   +L   ++P + TYS LI+G CK  K+   
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGA 231

Query: 408 FSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             L+D M+ +GL P+ V  + LI     NG +  A+  + Q +  +L+P+L  +NTL+ G
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 291

Query: 463 CCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
            C+   LK+A D   L   M M  +KPD  T+T LI G   +G L +A     +M++  +
Sbjct: 292 LCKKGDLKQAHD---LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENI 348

Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
             D + Y+A+I GL +         M + M   G+ PD   Y +++N   K+ ++    K
Sbjct: 349 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSK 408

Query: 580 LFGQLTDRGLEPDIITYNTIICG 602
           L  ++   G  P ++TYN ++ G
Sbjct: 409 LLKEMHRDGHAPSVVTYNVLMNG 431



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 162/328 (49%), Gaps = 5/328 (1%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+ ++S LI    ++G L++  E      +  L +       V++  + +         Y
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
           + +L  G+  ++  ++IL+   C+ G +  A  +F  +    L PS+++Y++L++G+ + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L +GF L   M+  G++PD    S+LINGL     M  A   F + +   L+PN   F
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTF 250

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  R    ++++  M   ++ PD+IT+  LI G+  +G L  A  L  +M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 310

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           +GL PD  TY+ +I G  K  ++       K M +  +  D   Y  L++ L +E     
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+  ++   GL+PD  TY  II  +C
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIINEFC 398



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 55/124 (44%)

Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
           N + D+   + LI      G L  AI  +    +  L     T   ++  L K K   + 
Sbjct: 67  NQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLV 126

Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
              ++ +   G    +  +N+L++   K+ ++  A  +F  +T  GL P +++YNT++ G
Sbjct: 127 WGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG 186

Query: 603 YCSL 606
           Y  L
Sbjct: 187 YIRL 190


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 191/393 (48%), Gaps = 30/393 (7%)

Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
           A  + +Q+  +G  PN+VT N ++   C  GQ+  + S+   +L +G +PN +T +TL+ 
Sbjct: 71  AISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMK 130

Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
             C + +++K+   ++ ++      + + Y  L++GL K G  +   + L    D    L
Sbjct: 131 GLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGL 190

Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
           +VV++++++D       V  A   Y  M   G  PNVI+Y+ LI G C  G+L  A  L 
Sbjct: 191 NVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLL 250

Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
            +++++ + P++ TY+ LID  CK GK+++  +L   M  RG   D V            
Sbjct: 251 NEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVT----------- 299

Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
                              + +L+DG C+ +       LFM M  + I+P+  T+T LI 
Sbjct: 300 -------------------YTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALID 340

Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
           G+   G L  A  LF  +L +G   DV TY+ +I GL K   +   L +   ME NG  P
Sbjct: 341 GLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIP 400

Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
           ++  + +++  L K+   D A KL  ++  +GL
Sbjct: 401 NVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 195/408 (47%), Gaps = 30/408 (7%)

Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFS 252
           V+++A      ++     P IV   +IL  L        A SL   + + G +PN+VT +
Sbjct: 32  VVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLN 91

Query: 253 TLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
            LIN FC   ++  +F +   ++++   P+ I  + L+ GL   G +++        + +
Sbjct: 92  ILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQ 151

Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
           G +++ V + ++++    IG+   A++    + +     NV+ Y+ +I GLC+   + EA
Sbjct: 152 GFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEA 211

Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING 432
              + ++  R + P+++TY++LI GFC +G+L   FSL + MI + + P           
Sbjct: 212 YDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINP----------- 260

Query: 433 LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
                              N++ +  L+D  C+  +  +   L   M       DV+T+T
Sbjct: 261 -------------------NVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYT 301

Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
            L+ G     +L  A  LF +M + G+ P+  TY+A+I GL KG  +     +F+ +   
Sbjct: 302 SLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVK 361

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
           G   D+  YNV++  L KE  LD AL +  ++ D G  P+++T+  II
Sbjct: 362 GCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIII 409



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 171/381 (44%), Gaps = 30/381 (7%)

Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
           I+  + +A S F+ +LL+   P +V F  ++    K      A  L   M    + P+L+
Sbjct: 29  IDNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLV 88

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
             +ILI+     G++     +L   L  G + + +  +++M      G+V ++V  +D++
Sbjct: 89  TLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKV 148

Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
           +  GF  N +SY  L+ GLC+ G    A      +       +++ Y+++IDG CK   +
Sbjct: 149 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLV 208

Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
            + +  Y  M  RG+                               PN+  + TL+ G C
Sbjct: 209 NEAYDFYSEMNARGI------------------------------FPNVITYTTLIGGFC 238

Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
              + T    L   M + NI P+V T+ +LI  +  +G +  A  L  +M  RG   DV+
Sbjct: 239 LAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVV 298

Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
           TY++++ G  K +N+     +F  M+  G+ P+   Y  L++ L K   L  A KLF  L
Sbjct: 299 TYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDL 358

Query: 585 TDRGLEPDIITYNTIICGYCS 605
             +G   D+ TYN +I G C 
Sbjct: 359 LVKGCCIDVCTYNVMIGGLCK 379



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 155/322 (48%), Gaps = 4/322 (1%)

Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
           + LI  +  +G++  S  +   +  +G   +   +  LM  L     V +       +  
Sbjct: 91  NILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVA 150

Query: 176 KGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           +GF +    Y  L+NGL + G    A    R +       N+V  N I+  LC +  +  
Sbjct: 151 QGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNE 210

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A   +  +   G  PNV+T++TLI  FC   +L  AF L N M+  ++ P++  Y+ILID
Sbjct: 211 AYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILID 270

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L K G++KE   LL     RG   DVV ++S++D +    ++ +A   + +M   G  P
Sbjct: 271 ALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQP 330

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           N  +Y+ LI GLC+ GRL +A  LF  +L++     + TY+ +I G CK G L +  ++ 
Sbjct: 331 NKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIK 390

Query: 412 DNMIKRGLKPDAVVCSLLINGL 433
             M   G  P+ V   ++I  L
Sbjct: 391 SKMEDNGCIPNVVTFEIIIRSL 412



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 126/245 (51%)

Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
           G    +Y  +++GL +  ++  A+  + ++  RG  PN++T   ++   C+ GQ+  A S
Sbjct: 189 GLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFS 248

Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
           L + ++L    PNV T++ LI+A CKE K+++A  L   M       D++ Y+ L+DG  
Sbjct: 249 LLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFC 308

Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           K   L +   L +   + G++ +   +++++D     G +  A + +  +L  G   +V 
Sbjct: 309 KNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVC 368

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           +Y+++I GLC++G L EA  +  ++      P+++T+  +I    K  +      L   M
Sbjct: 369 TYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM 428

Query: 415 IKRGL 419
           I +GL
Sbjct: 429 IAKGL 433



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 116/256 (45%), Gaps = 5/256 (1%)

Query: 100 FFRLFRDSLGDFGCD-YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLV 158
           F R+  DS        Y+ +I+   +   ++E+ + ++ M+  GI+ +      L+    
Sbjct: 179 FLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFC 238

Query: 159 DSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
            +  +   + L   M  K        Y  L++ L ++G ++ A ++  ++  RG   ++V
Sbjct: 239 LAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVV 298

Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
           T   +L   C N  +  A++LF  +   G +PN  T++ LI+  CK  +L+ A +L+  +
Sbjct: 299 TYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDL 358

Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
           +      D+  Y+++I GL K G L E   +     D G   +VV F  ++ +     + 
Sbjct: 359 LVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDEN 418

Query: 335 GRAVQTYDRMLNGGFL 350
            +A +    M+  G L
Sbjct: 419 DKAEKLLHEMIAKGLL 434


>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 418

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 222/456 (48%), Gaps = 72/456 (15%)

Query: 70  LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
           LI +++    +D AS VF  ++   G   +   +F           S LI  Y+  G I 
Sbjct: 35  LIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVF-----------SGLITAYLESGFIR 83

Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL 189
           +++E F    +   ++  D  ++++  L+      +Y+KL          V+ F      
Sbjct: 84  DAIEFFRLTREHKFWVPFDTCRKVLEHLMKL----KYFKL----------VWGF------ 123

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
                      ++++++ G+  ++   N ++ R C  G++  A S+FD +   G +P+VV
Sbjct: 124 -----------YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVV 172

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
           +F+TL++ + +   L++ F+L + M    + PD+  YS+LI+GL K  ++ E NEL    
Sbjct: 173 SFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEM 232

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           LD GL  + V F++++D +   G V  A++ Y ++L+ GF P++I+Y+ LI GLC++G L
Sbjct: 233 LDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDL 292

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
            +A  L  ++ ++ L+P  +TY++LIDG CK G L   F     MIK  ++ D V  + L
Sbjct: 293 KQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTAL 352

Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
           I+GL                              C+  R+ D  K+   M    +KPD  
Sbjct: 353 ISGL------------------------------CQEGRSVDAEKMLRGMLSVGLKPDNG 382

Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           T+T++I     +G + +   L  +M + G  P V+T
Sbjct: 383 TYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 183/419 (43%), Gaps = 71/419 (16%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V+  L+   L  G I +A    R   +  F     TC K+L+ L            +  +
Sbjct: 68  VFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEI 127

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L  G   ++  F+ L++ FCKE ++  A  +++ + +                       
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKW---------------------- 165

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
                        GL+  VV F+++M  Y+ +GD+    +    M   G  P+V +YS+L
Sbjct: 166 -------------GLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVL 212

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC++ ++ EA  LF ++L   L P+ +T+++LIDG CK+G++     +Y  ++ +G 
Sbjct: 213 INGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGF 272

Query: 420 KPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR---LKRATDTVKLF 476
            PD                              L  +NTL+ G C+   LK+A D   L 
Sbjct: 273 SPD------------------------------LITYNTLIFGLCKKGDLKQARD---LI 299

Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
             M M  +KPD IT+T LI G   +G L +A     +M+K  +  D + Y+A+I GL + 
Sbjct: 300 DEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359

Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
                   M + M   G+ PD   Y +++N   K+ ++    KL  ++   G  P ++T
Sbjct: 360 GRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 157/328 (47%), Gaps = 5/328 (1%)

Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
           D+ ++S LI    ++G +++  E      +    +       V++  + +         Y
Sbjct: 65  DIYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
             +L  G+  ++  ++IL+   C++G +  A  +F  +    L PS++++++L+ G+ + 
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRL 184

Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
           G L +GF L   M   G++PD    S+LINGL     M +A   F + +   L+PN   F
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTF 244

Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
            TL+DG C+  R    ++++  +      PD+IT+  LI G+  +G L  A  L  +M  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSM 304

Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
           + L PD ITY+ +I G  K  ++       K M +  +  D   Y  L++ L +E     
Sbjct: 305 KELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364

Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
           A K+   +   GL+PD  TY  II  +C
Sbjct: 365 AEKMLRGMLSVGLKPDNGTYTMIINEFC 392



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 24/255 (9%)

Query: 36  NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
           N +++  I+  +     +     H     P++   + LI+ L +    D A+ +F++M+ 
Sbjct: 175 NTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEML- 233

Query: 93  QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
                        + L   G  ++ LI+ + + G++D ++EI+  +   G   SPDL+  
Sbjct: 234 ------------DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQG--FSPDLITY 279

Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
             L+  L     + Q   L   M  K        Y  L++G  ++G +E AF   +++I+
Sbjct: 280 NTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIK 339

Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
                + V    ++  LC  G+  +A  +   +L VG KP+  T++ +IN FCK+  ++ 
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKT 399

Query: 267 AFQLYNLMMEMDLVP 281
             +L   M     VP
Sbjct: 400 GSKLLKEMXRDGHVP 414



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 52/122 (42%)

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
           + D+   + LI      G +  AI  F    +        T   ++  L K K   +   
Sbjct: 63  RSDIYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
            +K +   G    +  +N+L++   KE  +  A  +F  +T  GL P ++++NT++ GY 
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYI 182

Query: 605 SL 606
            L
Sbjct: 183 RL 184


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 212/462 (45%), Gaps = 45/462 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL------------------- 220
           ++E ++N  +R  + E A     Q+I RG VP   T N +L                   
Sbjct: 97  IHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNET 156

Query: 221 ---------------KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
                          K  C  G +     +   +  +G  PNVV ++TLI+  CK   +E
Sbjct: 157 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 216

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +  QL+  M E+D+V +   Y++LI+G FK G  K+G EL       G+  +V  ++S++
Sbjct: 217 RGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 276

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
                 G +  A + +D M   G   NV++Y+ LI GLCQ+ R++EA  L  ++    L 
Sbjct: 277 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 336

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--------MGDA 437
           P+L++Y++LIDG+C  G L    SL++ M   G  P     ++LI G         + D 
Sbjct: 337 PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDM 396

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           +R   +     L P+   +  LMD   R        +++  M    +  D+  + VLI G
Sbjct: 397 VR---EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHG 453

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G +  A  LF  + +  L P+ + Y+ +I+G  K  +    L + K M  NG+ P+
Sbjct: 454 LCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 513

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +A YN  + +L K+     A  L   + + GL+P I  +N I
Sbjct: 514 VASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 223/464 (48%), Gaps = 44/464 (9%)

Query: 83  ASHVFDKMVIQFGKTYNFF----RLFRDSLGDFGCD-YSF--LIENYVRIGKIDESVEIF 135
            S+ F+ ++I   K+ NFF    R+F ++ G+   D YSF  +I+    +G +D+  E+ 
Sbjct: 129 GSNTFNNLLILLIKS-NFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVL 187

Query: 136 AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIE 195
             M +MG  LSP++V                             VY  L++G  + G IE
Sbjct: 188 GQMEEMG--LSPNVV-----------------------------VYTTLIDGCCKNGDIE 216

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
               +  ++ +   V N  T   ++      G   +   L++ + L G  PNV T++++I
Sbjct: 217 RGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 276

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
              C + KL  AF+L++ M E  +  +++ Y+ LI GL +  R+ E   L+      GL 
Sbjct: 277 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 336

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            +++ +++++D Y  IG++ +A   +++M + G  P++ +Y+ILI G  +         +
Sbjct: 337 PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDM 396

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
             ++  R L PS +TY+ L+D   +S  +   F +Y +M K GL  D  +  +LI+GL  
Sbjct: 397 VREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 456

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              M +A + F     M L PN  I+NT++ G C+   +   ++L   MG   + P+V +
Sbjct: 457 VGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 516

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   I+ +      + A +L   M++ GL P +  ++ I    F
Sbjct: 517 YNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARF 560


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 208/420 (49%), Gaps = 6/420 (1%)

Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
           R G    + H+   ++++G+ P+++ C K++K       +  A  + ++L   G +P+V 
Sbjct: 97  RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVF 155

Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
            ++ LIN FCK  +++ A ++ + M   D  PD + Y+I+I  L   G+L    ++L   
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
           L    +  V+ ++ +++A +  G V  A++  D ML+ G  P++ +Y+ +I+G+C++G +
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275

Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
             A  +   + ++  EP +++Y+ L+      GK  +G  L   M      P+ V  S+L
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335

Query: 430 I-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
           I     +G + +A+          L P+ + ++ L+   CR  R    ++    M     
Sbjct: 336 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 395

Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
            PD++ +  ++  +   G    A+ +F ++ + G +P+  +Y+ +   L+   +    LH
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 455

Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           M   M  NG+ PD   YN +++ L +E  +D A +L   +      P ++TYN ++ G+C
Sbjct: 456 MILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFC 515



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 189/394 (47%), Gaps = 11/394 (2%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
            Y  L+NG  +   I++A  +  ++  + F P+ VT N ++  LC  G++  A  + D L
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           L    +P V+T++ LI A   E  +++A +L + M+   L PD+  Y+ +I G+ K G +
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
               E++     +G + DV+ ++ ++ A +  G      +   +M +    PNV++YSIL
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I  LC+ G++ EA  L   +  + L P   +Y  LI  FC+ G+L       + MI  G 
Sbjct: 336 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 395

Query: 420 KPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
            PD      V+ +L  NG    AL  F +   +   PN   +NT+      L  + D ++
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA---LWSSGDKIR 452

Query: 475 -LFMLMGMYN--IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIH 531
            L M++ M +  I PD IT+  +I  +  +G +  A  L   M      P V+TY+ ++ 
Sbjct: 453 ALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLL 512

Query: 532 GLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
           G  K   I   + +   M  NG  P+   Y VL+
Sbjct: 513 GFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLI 546



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 188/392 (47%), Gaps = 6/392 (1%)

Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
           KI  R C +G    +  L + ++  G  P+V+  + LI  F     + KA ++  ++ + 
Sbjct: 90  KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKF 149

Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
              PD+  Y+ LI+G  K  R+ +   +L     +    D V ++ ++ +    G +  A
Sbjct: 150 G-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 208

Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
           ++  D++L+    P VI+Y+ILI+    +G + EA  L  ++L R L+P + TY+++I G
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPN 452
            CK G +   F +  N+  +G +PD +  ++L+  L+      +  +   +       PN
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328

Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
           +  ++ L+   CR  +  + + L  LM    + PD  ++  LI     +G L  AI    
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 388

Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
            M+  G  PD++ Y+ ++  L K       L +F  +   G +P+ + YN + + L    
Sbjct: 389 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448

Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
           +   AL +  ++   G++PD ITYN++I   C
Sbjct: 449 DKIRALHMILEMVSNGIDPDEITYNSMISCLC 480



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/427 (22%), Positives = 192/427 (44%), Gaps = 14/427 (3%)

Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG 175
           LI+ +  +  + ++V +   +   G    PD+     L++     N +    ++   MR 
Sbjct: 126 LIKGFFTLRNVPKAVRVMEILEKFG---QPDVFAYNALINGFCKMNRIDDATRVLDRMRS 182

Query: 176 KGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
           K F      Y  ++  L  +G ++ A  +  Q++     P ++T   +++   + G +  
Sbjct: 183 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDE 242

Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
           A  L D +L  G KP++ T++T+I   CKE  +++AF++   +      PD+I Y+IL+ 
Sbjct: 243 ALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLR 302

Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
            L   G+ +EG +L+          +VV +S ++      G +  A+     M   G  P
Sbjct: 303 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 362

Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
           +  SY  LI   C++GRL  A      ++     P ++ Y++++   CK+GK      ++
Sbjct: 363 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 422

Query: 412 DNMIKRGLKPDAVVCSLLINGLM--GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
             + + G  P++   + + + L   GD   AL    + V   + P+   +N+++   CR 
Sbjct: 423 GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCRE 482

Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
                  +L + M      P V+T+ +++ G      +  AI +   M+  G  P+  TY
Sbjct: 483 GMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTY 542

Query: 527 SAIIHGL 533
           + +I G+
Sbjct: 543 TVLIEGI 549



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 194/413 (46%), Gaps = 13/413 (3%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
           Y+ LI  + ++ +ID++  +   M       SPD V    ++  L     +    K+   
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKD--FSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
           +           Y  L+   + +G ++ A  +  +++ RG  P++ T N I++ +C  G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
           +  A  +   L L G +P+V++++ L+ A   + K E+  +L   M      P+++ YSI
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
           LI  L + G+++E   LL    ++GL  D   +  ++ A+   G +  A++  + M++ G
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
            LP++++Y+ ++  LC+ G+  +A  +FG++      P+  +Y+++      SG      
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 409 SLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
            +   M+  G+ PD +  + +I+     G++  A             P++  +N ++ G 
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGF 514

Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
           C+  R  D + +   M     +P+  T+TVLI GI   G  + A+ L   +++
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 567



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
            G+   ++ L   M+++G  PDVI  + +I G F  +N+   + + +++E+ G  PD+  
Sbjct: 98  SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFA 156

Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
           YN L+N   K   +D A ++  ++  +   PD +TYN +I   CS
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 201



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 4/173 (2%)

Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
           +Y+ ++    + GK D+++EIF  + ++G   +      + S L  S    +   +   M
Sbjct: 401 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 460

Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
              G       Y  +++ L R+G+++ AF +   +    F P++VT N +L   C   +I
Sbjct: 461 VSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 520

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
            +A  + D ++  G +PN  T++ LI          +A +L N ++ ++ + +
Sbjct: 521 EDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISE 573



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           I H   +  N    LH+ + M R G  PD+ +   L+       N+  A+++   L   G
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150

Query: 589 LEPDIITYNTIICGYCSLN 607
            +PD+  YN +I G+C +N
Sbjct: 151 -QPDVFAYNALINGFCKMN 168


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 212/462 (45%), Gaps = 45/462 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL------------------- 220
           ++E ++N  +R  + E A     Q+I RG VP   T N +L                   
Sbjct: 84  IHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNET 143

Query: 221 ---------------KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
                          K  C  G +     +   +  +G  PNVV ++TLI+  CK   +E
Sbjct: 144 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 203

Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
           +  QL+  M E+D+V +   Y++LI+G FK G  K+G EL       G+  +V  ++S++
Sbjct: 204 RGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 263

Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
                 G +  A + +D M   G   NV++Y+ LI GLCQ+ R++EA  L  ++    L 
Sbjct: 264 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 323

Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--------MGDA 437
           P+L++Y++LIDG+C  G L    SL++ M   G  P     ++LI G         + D 
Sbjct: 324 PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDM 383

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
           +R   +     L P+   +  LMD   R        +++  M    +  D+  + VLI G
Sbjct: 384 VR---EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHG 440

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
           +   G +  A  LF  + +  L P+ + Y+ +I+G  K  +    L + K M  NG+ P+
Sbjct: 441 LCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 500

Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
           +A YN  + +L K+     A  L   + + GL+P I  +N I
Sbjct: 501 VASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 222/464 (47%), Gaps = 44/464 (9%)

Query: 83  ASHVFDKMVIQFGKTYNFF----RLFRDSLGDFGCD-YSF--LIENYVRIGKIDESVEIF 135
            S+ F+ ++I   K+ NFF    R+F ++ G+   D YSF  +I+    +G +D+  E+ 
Sbjct: 116 GSNTFNNLLILLIKS-NFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVL 174

Query: 136 AYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIE 195
             M +MG  LSP++V                             VY  L++G  + G IE
Sbjct: 175 GQMEEMG--LSPNVV-----------------------------VYTTLIDGCCKNGDIE 203

Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
               +  ++ +   V N  T   ++      G   +   L++ + L G  PNV T++++I
Sbjct: 204 RGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 263

Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
              C + KL  AF+L++ M E  +  +++ Y+ LI GL +  R+ E   L+      GL 
Sbjct: 264 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 323

Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
            +++ +++++D Y  IG++ +A   +++M + G  P++ +Y+ILI G  +         +
Sbjct: 324 PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDM 383

Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
             ++  R L PS +TY+ L+D   +S  +   F +Y +M K GL  D  +  +LI+GL  
Sbjct: 384 VREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 443

Query: 434 ---MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
              M +A + F     M L PN  I+NT++ G C+   +   ++L   MG   + P+V +
Sbjct: 444 VGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 503

Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           +   I  +      + A +L   M++ GL P +  ++ I    F
Sbjct: 504 YNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARF 547


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/571 (24%), Positives = 250/571 (43%), Gaps = 83/571 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ LI  Y  IG ++    +   MS+ G+  +      L+        + +   +   ++
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
            K       +Y  LM+G  R G I +A  +H  +I+ G   N   CN ++   C +GQ+ 
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A  +F  +     KP+  T++TL++ +C+   +++A +L + M + ++VP ++ Y+IL+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            G  + G   +   L    L RG+  D +  S++++A   +GD   A++ ++ +L  G L
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS- 409
            + I+ +++I GLC+  ++ EA  +   V I R +P++ TY +L  G+ K G L++ F+ 
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563

Query: 410 --------------LYDNMIK--------------------RGLKPDAVVCSLLING--- 432
                         +Y+ +I                     RGL P       LI G   
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623

Query: 433 --LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF--------MLMGMY 482
             ++  A    F+ +   +  N+ I + + +   RL +  +   L         +L G  
Sbjct: 624 IGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ 683

Query: 483 NIK------------------------------PDVITHTVLIRGIASQGSLSSAILLFF 512
           ++K                              P+ I + V I G+   G L  A  LF 
Sbjct: 684 SLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFS 743

Query: 513 QMLKRG-LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
            +L      PD  TY+ +IHG     +I+    +   M   G+ P+I  YN L+  L K 
Sbjct: 744 DLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKL 803

Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
            N+D A +L  +L  +G+ P+ ITYNT+I G
Sbjct: 804 GNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/523 (24%), Positives = 239/523 (45%), Gaps = 48/523 (9%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  L++ Y R G+I ++V +   M ++G+  +  +   L++    S  + +  ++   M 
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393

Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
                     Y  L++G  R G ++ A  +  Q+ Q+  VP ++T N +LK     G   
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
           +  SL+ ++L  G   + ++ STL+ A  K     +A +L+  ++   L+ D I  +++I
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
            GL K  ++ E  E+L        K  V  + ++   Y  +G++  A    + M   G  
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P +  Y+ LI G  +   L +   L  ++  R L P++ TY +LI G+C  G +   ++ 
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633

Query: 411 YDNMIKRGLKPDAVVCSLLINGLMG------------------------DALRFFFQSVR 446
              MI++G+  +  +CS + N L                           +L+ F ++  
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASA 693

Query: 447 MT-------------------LIPNLFIFNTLMDGCCRLKRATDTVKLFM-LMGMYNIKP 486
            T                   L+PN  ++N  + G C+  +  D  KLF  L+      P
Sbjct: 694 TTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP 753

Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMF 546
           D  T+T+LI G A  G ++ A  L  +M  +G+ P+++TY+A+I GL K  N+     + 
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813

Query: 547 KLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
             + + G+ P+   YN L++ L+K  N+  A++L  ++ ++GL
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 214/424 (50%), Gaps = 11/424 (2%)

Query: 184 LMNGLLRKGVIENAFHMHRQVIQR-GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
           ++N   R G ++ A    ++     G   N+VT N ++    + G +   + +  ++   
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290

Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
           G   NVVT+++LI  +CK+  +E+A  ++ L+ E  LV D  +Y +L+DG  + G++++ 
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350

Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
             +    ++ G++ +  + +S+++ Y   G +  A Q + RM +    P+  +Y+ L+ G
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDG 410

Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
            C+ G + EA  L  Q+  + + P+++TY+ L+ G+ + G   D  SL+  M+KRG+  D
Sbjct: 411 YCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNAD 470

Query: 423 AVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
            + CS L+  L  +GD   A++ +   +   L+ +    N ++ G C++++  +  ++  
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILD 530

Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
            + ++  KP V T+  L  G    G+L  A  +   M ++G+ P +  Y+ +I G FK +
Sbjct: 531 NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYR 590

Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
           +++    +   +   G+ P +A Y  L+        +D A     ++ ++G     IT N
Sbjct: 591 HLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKG-----ITLN 645

Query: 598 TIIC 601
             IC
Sbjct: 646 VNIC 649



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 222/474 (46%), Gaps = 78/474 (16%)

Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
           F P +   + ILK     G + NA  +FD +   G  P++++ ++L++   ++ +   A 
Sbjct: 153 FSPTVF--DMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVAL 210

Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL-TALDRGLKLDVVVFSSVMDA 327
            +Y+ M+  ++ PD+   SI+++   ++G + +       T    GL+L+VV ++S+++ 
Sbjct: 211 HVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLING 270

Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
           Y  IGDV    +    M   G   NV++Y+ LIKG C++G + EA  +F  +  ++L   
Sbjct: 271 YAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVAD 330

Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
              Y  L+DG+C++G++RD   ++DNMI+ G++ +  +C+ LING      + +A + F 
Sbjct: 331 QHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFS 390

Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA--- 499
           +    +L P+   +NTL+DG CR     + +KL   M    + P V+T+ +L++G +   
Sbjct: 391 RMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450

Query: 500 --------------------------------SQGSLSSAILLFFQMLKRGLTPDVIT-- 525
                                             G  + A+ L+  +L RGL  D IT  
Sbjct: 451 AFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLN 510

Query: 526 ---------------------------------YSAIIHGLFKGKNISVGLHMFKLMERN 552
                                            Y A+ HG +K  N+     + + MER 
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK 570

Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
           G+ P I +YN L++   K  +L+    L  +L  RGL P + TY  +I G+C++
Sbjct: 571 GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNI 624



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 221/429 (51%), Gaps = 39/429 (9%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           V++ ++     KG+++NA H+   +   G +P++++CN +L  L   G+   A  ++D +
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
           +     P+V T S ++NA+C+   ++KA                ++++            
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKA----------------MVFA------------ 248

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
           KE    L      GL+L+VV ++S+++ Y  IGDV    +    M   G   NV++Y+ L
Sbjct: 249 KETESSL------GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSL 302

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           IKG C++G + EA  +F  +  ++L      Y  L+DG+C++G++RD   ++DNMI+ G+
Sbjct: 303 IKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGV 362

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           + +  +C+ LING      + +A + F +    +L P+   +NTL+DG CR     + +K
Sbjct: 363 RTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALK 422

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
           L   M    + P V+T+ +L++G +  G+    + L+  MLKRG+  D I+ S ++  LF
Sbjct: 423 LCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALF 482

Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
           K  + +  + +++ +   G+  D    NV+++ L K   ++ A ++   +     +P + 
Sbjct: 483 KLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ 542

Query: 595 TYNTIICGY 603
           TY  +  GY
Sbjct: 543 TYQALSHGY 551



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 167/380 (43%), Gaps = 25/380 (6%)

Query: 254 LINAFCKEAKL--EKAFQLYNLM-MEMDLVPDLIIYSILIDGLFKAGRLKEGNELL--LT 308
           L+N+  +  +L  E   +++NL   +    PD   Y  ++  L +A   ++    L  L 
Sbjct: 72  LLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELV 131

Query: 309 ALD--------------RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
           AL+              +       VF  ++  Y   G V  A+  +D M N G +P+++
Sbjct: 132 ALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLL 191

Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
           S + L+  L ++G    A  ++ Q++   + P + T S +++ +C+SG +          
Sbjct: 192 SCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKET 251

Query: 415 IKR-GLKPDAVVCSLLING--LMGDA---LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
               GL+ + V  + LING  ++GD     R         +  N+  + +L+ G C+   
Sbjct: 252 ESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGL 311

Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
             +   +F L+    +  D   + VL+ G    G +  A+ +   M++ G+  +    ++
Sbjct: 312 MEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNS 371

Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
           +I+G  K   +     +F  M    + PD   YN L++   +   +D ALKL  Q+  + 
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431

Query: 589 LEPDIITYNTIICGYCSLNS 608
           + P ++TYN ++ GY  + +
Sbjct: 432 VVPTVMTYNILLKGYSRIGA 451



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 120/263 (45%), Gaps = 22/263 (8%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y  LI  +  IG ID++      M + GI L+ ++  ++ + L   + + +   L + + 
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV 673

Query: 175 G-----KGF-CVYEFL---MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCI 225
                  G+  + EFL       L+   I  A  +     ++  VPN +  N  +  LC 
Sbjct: 674 DFDLLLPGYQSLKEFLEASATTCLKTQKI--AESVENSTPKKLLVPNNIVYNVAIAGLCK 731

Query: 226 NGQIGNASSLFDVLLLVGP-KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
            G++ +A  LF  LL      P+  T++ LI+       + KAF L + M    ++P+++
Sbjct: 732 AGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIV 791

Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
            Y+ LI GL K G +     LL     +G+  + + +++++D  V  G+V  A++  ++M
Sbjct: 792 TYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851

Query: 345 LNGGFLPNVISYSILIKGLCQQG 367
           +  G          L++G  +QG
Sbjct: 852 IEKG----------LVRGSDKQG 864


>gi|255661020|gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 376

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 187/354 (52%), Gaps = 6/354 (1%)

Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
           C+   ++ A  +Y  ++E  L  D ++Y+ +++G F+ GR+K+  EL       G + +V
Sbjct: 1   CESGDIDGAEMVYKDIVESKLSLDAVVYNTMLNGFFRVGRIKDCFELWELMGKEGSR-NV 59

Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
             F+ +M      G V   +  ++ M   GF+ + I+Y IL+ G C+ G + ++  +   
Sbjct: 60  ASFNIMMRGLFNNGKVDEVILIWELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLEI 119

Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG--- 435
             ++        YS++I+G CK  KL    S+ + MIK G KP+A V + LINGL+G   
Sbjct: 120 AEMKGGVLDAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSK 179

Query: 436 --DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
             DA+R F +       P +  +NTL++G C+ +R  +   L   M      P VIT+++
Sbjct: 180 FEDAIRVFQEMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVITYSM 239

Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
           LI+G+     +  A+ L++Q+  +G  PD+  ++ +IHGL     + + L ++  M    
Sbjct: 240 LIKGLCLCHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWN 299

Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
            AP++  +N L+    K+ ++  AL ++ ++   GL+PDII+YN  + G CS N
Sbjct: 300 CAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGLCSCN 353



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 177/351 (50%), Gaps = 6/351 (1%)

Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
           VY  ++NG  R G I++ F +   + + G   N+ + N +++ L  NG++     +++++
Sbjct: 27  VYNTMLNGFFRVGRIKDCFELWELMGKEG-SRNVASFNIMMRGLFNNGKVDEVILIWELM 85

Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
              G   + +T+  L++ FCK   + K+  +  +      V D   YS +I+GL K  +L
Sbjct: 86  KKSGFVEDSITYGILVHGFCKNGDVNKSLHVLEIAEMKGGVLDAFAYSAMINGLCKDSKL 145

Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
            +   +L   +  G K +  V++++++  VG      A++ +  M +    P +I+Y+ L
Sbjct: 146 DKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGSTHCSPTIITYNTL 205

Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
           I GLC+  R  EA  L  ++L +   P ++TYS LI G C   K+     L+  +  +G 
Sbjct: 206 INGLCKGERFGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCHKVEMALQLWYQVTSKGF 265

Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
           KPD  + ++LI+GL     M  AL  +F        PNL   NTLM+G  +     + + 
Sbjct: 266 KPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAPNLVTHNTLMEGFYKDGDVRNALV 325

Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
           ++  +    ++PD+I++ + ++G+ S   +S AIL     L + + P +IT
Sbjct: 326 IWARILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDALTKKIVPTIIT 376



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 172/348 (49%), Gaps = 10/348 (2%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           Y+ ++  + R+G+I +  E++  M   G          +M  L ++  V +   +   M+
Sbjct: 28  YNTMLNGFFRVGRIKDCFELWELMGKEGSRNVASF-NIMMRGLFNNGKVDEVILIWELMK 86

Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
             GF      Y  L++G  + G +  + H+      +G V +    + ++  LC + ++ 
Sbjct: 87  KSGFVEDSITYGILVHGFCKNGDVNKSLHVLEIAEMKGGVLDAFAYSAMINGLCKDSKLD 146

Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
            A S+ + ++  G KPN   ++ LIN     +K E A +++  M      P +I Y+ LI
Sbjct: 147 KAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGSTHCSPTIITYNTLI 206

Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
           +GL K  R  E  +L+   L++G    V+ +S ++        V  A+Q + ++ + GF 
Sbjct: 207 NGLCKGERFGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCHKVEMALQLWYQVTSKGFK 266

Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
           P++  ++ILI GLC  G++  A  L+  +      P+L+T+++L++GF K G +R+   +
Sbjct: 267 PDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAPNLVTHNTLMEGFYKDGDVRNALVI 326

Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
           +  +++ GL+PD +  ++ + GL     +  A+ F   ++   ++P +
Sbjct: 327 WARILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDALTKKIVPTI 374



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 129/281 (45%), Gaps = 41/281 (14%)

Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
           YS +I    +  K+D++V +   M   G   +  +   L++ LV S+      ++ + M 
Sbjct: 132 YSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEM- 190

Query: 175 GKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
           G   C      Y  L+NGL +      A+ + ++++++G+ P ++T + ++K LC+  ++
Sbjct: 191 GSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCHKV 250

Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
             A  L+  +   G KP++   + LI+  C   K++ A  LY  M   +  P+L+ ++ L
Sbjct: 251 EMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAPNLVTHNTL 310

Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
           ++G +K G                                   DV  A+  + R+L  G 
Sbjct: 311 MEGFYKDG-----------------------------------DVRNALVIWARILRNGL 335

Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLT 390
            P++ISY+I +KGLC   R+  A       L +++ P+++T
Sbjct: 336 QPDIISYNITLKGLCSCNRISGAILFLHDALTKKIVPTIIT 376


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 207/398 (52%), Gaps = 5/398 (1%)

Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
           +P+IV  +++L  +    +     SLF  + ++G   ++ +FSTLI+ FC+ ++L  A  
Sbjct: 70  LPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALS 129

Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
               MM++   P ++ +  L++G     R++E   L+   +  G + +VV++++++D+  
Sbjct: 130 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 189

Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
               V  A+   + M   G  P+VI+Y+ LI  L   G+   +  +   ++   + P ++
Sbjct: 190 ENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVI 249

Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQS 444
           T+S++ID F K G+L +    YD MI+R + P+ V  + LINGL     + +A +     
Sbjct: 250 TFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFM 309

Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
           V     PN   +NTL++G C+ KR  D +K+  +M    +  D  T+  L +G    G  
Sbjct: 310 VSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQF 369

Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
           ++A  +  +M+  G+ PD+ T++ ++ GL +   I   L   + ++++     I  YN++
Sbjct: 370 NAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNII 429

Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
           +  + K   ++ A  LF  L  +G+ PD+ITY T++ G
Sbjct: 430 IKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIG 467



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 192/360 (53%), Gaps = 6/360 (1%)

Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
           ++++ GF P+IVT   ++   C   +I  A SL D ++ +G +PNVV ++T+I++ C+  
Sbjct: 133 KMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENR 192

Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
           +++ A  + N M +M + PD+I Y+ LI  LF +G+      +L   +  G+  DV+ FS
Sbjct: 193 QVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFS 252

Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
           +++D +   G +  A + YD M+     PN+++Y+ LI GLC  G L EA  +   ++ +
Sbjct: 253 AMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSK 312

Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDA 437
              P+ +TY++L++G+CKS ++ D   +   M   G+  D    + L  G         A
Sbjct: 313 GFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAA 372

Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
            +   + V   ++P+++ FN L+DG C   +    +     +        +IT+ ++I+G
Sbjct: 373 EKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKG 432

Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER-NGVAP 556
           +     +  A  LF  +  +G++PDVITY+ ++ GL + +       +++ M++ +G+ P
Sbjct: 433 MCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 179/385 (46%), Gaps = 5/385 (1%)

Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
           +  +A +LF  +    P P++V FS L+ A  K  K E    L+  +  + +  DL  +S
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
            LID   +  RL      L   +  G +  +V F S+++ +  +  +  A+   D+++  
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
           G+ PNV+ Y+ +I  LC+  ++  A  +   +    + P ++TY+SLI     SGK    
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
             +  +M++ G+ PD +  S +I+     G + +A + + + ++ ++ PN+  +N+L++G
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLING 292

Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
            C      +  K+   M      P+ +T+  L+ G      +  A+ +   M   G+  D
Sbjct: 293 LCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGD 352

Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
             TY+ +  G  +    +    +   M   GV PDI  +N+LL+ L +   ++ AL    
Sbjct: 353 TFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLE 412

Query: 583 QLTDRGLEPDIITYNTIICGYCSLN 607
            L        IITYN II G C  N
Sbjct: 413 DLQKSETVVGIITYNIIIKGMCKAN 437


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.328    0.144    0.430 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,151,803,534
Number of Sequences: 23463169
Number of extensions: 376724275
Number of successful extensions: 1266696
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7877
Number of HSP's successfully gapped in prelim test: 4211
Number of HSP's that attempted gapping in prelim test: 992215
Number of HSP's gapped (non-prelim): 85331
length of query: 619
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 470
effective length of database: 8,863,183,186
effective search space: 4165696097420
effective search space used: 4165696097420
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 80 (35.4 bits)