BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047659
(619 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/596 (44%), Positives = 382/596 (64%), Gaps = 16/596 (2%)
Query: 22 ESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRD 81
+S + S+LQ N+ N +L +L + P A+++F+W P+ + HVL+++ M D
Sbjct: 59 DSSVYGSNLQRNETNLVLLSL--ESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFD 116
Query: 82 VASHVFDKMVIQFGKTYNFFRLFRD-SLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSD 140
VA VFD+M+ GK +N RD SL C FL+E R G +D+++EIF Y +
Sbjct: 117 VADKVFDEMITNRGKDFNVLGSIRDRSLDADVC--KFLMECCCRYGMVDKALEIFVYSTQ 174
Query: 141 MGIYLSPDLVQRLMSCLVDSNSVG----QYYKLCRA-MRGKGFCVYEFLMNGLLRKGVIE 195
+G+ + D V R+++ L+ S+ V + KLCR + G + F+++ L KG +
Sbjct: 175 LGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVT 234
Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLI 255
A HR V++RGF IV+CNK+LK L ++ QI AS L ++L GP PNVVTF TLI
Sbjct: 235 KALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLI 293
Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
N FCK ++++AF L+ +M + + PDLI YS LIDG FKAG L G++L AL +G+K
Sbjct: 294 NGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353
Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
LDVVVFSS +D YV GD+ A Y RML G PNV++Y+ILIKGLCQ GR+ EA G+
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
+GQ+L R +EPS++TYSSLIDGFCK G LR GF+LY++MIK G PD V+ +L++
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
GLM A+RF + + ++ N+ +FN+L+DG CRL R + +K+F LMG+Y IKPDV T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
T ++R +G L A+ LFF+M K GL PD + Y +I K ++GL +F LM+
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
RN ++ DIA+ NV++++L K ++ A K F L + +EPDI+TYNT+ICGYCSL
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 271/502 (53%), Gaps = 17/502 (3%)
Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD----SNSVGQYYKLCRAM 173
LI + + G++D + ++F M GI PDL+ S L+D + +G +KL
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGI--EPDLIA--YSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
KG V+ ++ ++ G + A ++++++ +G PN+VT ++K LC +G+I
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
A ++ +L G +P++VT+S+LI+ FCK L F LY M++M PD++IY +L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
+DGL K G + + L + ++L+VVVF+S++D + + A++ + M G
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
P+V +++ +++ +GRL EA LF ++ LEP L Y +LID FCK K G
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
L+D M + + D VC+++I+ L + DA +FF + + P++ +NT++ G C
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
L+R + ++F L+ + P+ +T T+LI + + AI +F M ++G P+ +
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
TY ++ K +I +F+ M+ G++P I Y+++++ L K +D A +F Q
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 585 TDRGLEPDIITYNTIICGYCSL 606
D L PD++ Y +I GYC +
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKV 789
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 198/365 (54%), Gaps = 17/365 (4%)
Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLV-PDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
L+ C+ ++KA +++ ++ +V P +Y +L + L + R+ +L+ D+
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRV----DLIADHFDK 206
Query: 313 ----GLKLD-VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
G++ V V+DA G+V +A+ + ++ GF ++S + ++KGL
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD- 265
Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
++ A L VL P+++T+ +LI+GFCK G++ F L+ M +RG++PD + S
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 428 LLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
LI+G ++G + F Q++ + ++ +F++ +D + ++ M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
I P+V+T+T+LI+G+ G + A ++ Q+LKRG+ P ++TYS++I G K N+ G
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
+++ M + G PD+ IY VL++ L K+ + A++ ++ + + +++ +N++I G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 603 YCSLN 607
+C LN
Sbjct: 506 WCRLN 510
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 194/393 (49%), Gaps = 17/393 (4%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS----VGQYYKLC 170
YS LI+ + + G + ++ M MG PD+V + LVD S + +
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMG--YPPDVV--IYGVLVDGLSKQGLMLHAMRFS 484
Query: 171 RAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
M G+ V+ L++G R + A + R + G P++ T +++ +
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
G++ A LF + +G +P+ + + TLI+AFCK K QL++LM + D+ +
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604
Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
+++I LFK R+++ ++ ++ ++ D+V +++++ Y + + A + ++ +
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
F PN ++ +ILI LC+ + A +F + + +P+ +TY L+D F KS +
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
F L++ M ++G+ P V S++I+GL + +A F Q++ L+P++ + L+
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
G C++ R + L+ M +KPD + L
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 422 DAVVCSLLIN-----GLMGDALRFFFQSVRM-TLIPNLFIFNTL--MDGCCRLKRATDTV 473
DA VC L+ G++ AL F S ++ +IP ++ L + G R+ D
Sbjct: 145 DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHF 204
Query: 474 KLFMLMGMYNIKPD-VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
G I+P V H ++ + +G ++ A+ +++RG +++ + ++ G
Sbjct: 205 DKLCRGG---IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG 261
Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
L I V + L+ G AP++ + L+N K +D A LF + RG+EPD
Sbjct: 262 L-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320
Query: 593 IITYNTIICGYCSLNSCLIDGYFKS 617
+I Y+T LIDGYFK+
Sbjct: 321 LIAYST-----------LIDGYFKA 334
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 259 bits (661), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 150/500 (30%), Positives = 264/500 (52%), Gaps = 9/500 (1%)
Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
DY + N + K+D++V +F M + S +L+S + N L M
Sbjct: 48 DYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 107
Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
+ G Y L+N R+ + A + ++++ G+ P+IVT N +L C +I
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
+A SL ++ +G +P+ TF+TLI+ + + +A L + M+ PDL+ Y I+
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
++GL K G + LL ++ VV++++++DA +V A+ + M N G
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
PNV++Y+ LI+ LC GR +A L ++ R++ P+++T+S+LID F K GKL +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
LYD MIKR + PD S LING + +A F + PN+ +NTL+ G C
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
+ KR + ++LF M + + +T+T LI G +A ++F QM+ G+ PD++
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
TYS ++ GL + L +F+ ++R+ + PDI YN+++ + K ++ LF L
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 585 TDRGLEPDIITYNTIICGYC 604
+ +G++P+++TY T++ G+C
Sbjct: 528 SLKGVKPNVVTYTTMMSGFC 547
Score = 208 bits (530), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 145/573 (25%), Positives = 277/573 (48%), Gaps = 39/573 (6%)
Query: 23 SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
S ++DL+ + A + +++K+ P P+I F + ++ N L+ + L M+++
Sbjct: 53 SINRLNDLKLDDAVNLFGDMVKSR-PFPSIVEFSKLLSAIAKMNKFDLV-ISLGEQMQNL 110
Query: 83 ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
G ++N + YS LI + R ++ ++ + A M +G
Sbjct: 111 ------------GISHNLYT------------YSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 143 IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIEN 196
PD+V L++ N + L M G+ F L++GL R
Sbjct: 147 --YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASE 204
Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
A + +++ +G P++VT ++ LC G I A SL + +P VV ++T+I+
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
A C + A L+ M + P+++ Y+ LI L GR + + LL ++R +
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
+VV FS+++DA+V G + A + YD M+ P++ +YS LI G C RL EA +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-- 434
++ + P+++TY++LI GFCK+ ++ +G L+ M +RGL + V + LI+G
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 435 ---GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
+A F Q V ++P++ ++ L+DG C + + +F + ++PD+ T+
Sbjct: 445 RECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
++I G+ G + LF + +G+ P+V+TY+ ++ G + +F+ M+
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
G PD YN L+ +++ + A+ +L ++
Sbjct: 565 EGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 228/460 (49%), Gaps = 9/460 (1%)
Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
L+ + +I ++V + M +MG L+ L N + L M KG
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 178 ----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
Y ++NGL ++G I+ A + +++ Q P +V N I+ LC + +A
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
+LF + G +PNVVT+++LI C + A +L + M+E + P+++ +S LID
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
K G+L E +L + R + D+ +SS+++ + + A ++ M++ PNV
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
++Y+ LIKG C+ R+ E LF ++ R L + +TY++LI GF ++ + + ++
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 414 MIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
M+ G+ PD + S+L++GL + AL F R + P+++ +N +++G C+ +
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
D LF + + +KP+V+T+T ++ G +G A LF +M + G PD TY+
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
+I + + + + + M D + ++ NML
Sbjct: 577 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 212/417 (50%), Gaps = 5/417 (1%)
Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
+++A ++ +++ P+IV +K+L + + SL + + +G N+ T+S
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
LIN FC+ ++L A + MM++ PD++ + L++G R+ + L+ ++ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
+ D F++++ AV DRM+ G P++++Y I++ GLC++G + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-- 431
L ++ ++EP ++ Y+++ID C + D +L+ M +G++P+ V + LI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 432 ---GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
G DA R + + PN+ F+ L+D + + + KL+ M +I PD+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
T++ LI G L A +F M+ + P+V+TY+ +I G K K + G+ +F+
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
M + G+ + Y L++ + D A +F Q+ G+ PDI+TY+ ++ G C+
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 198/387 (51%), Gaps = 5/387 (1%)
Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
++ +A +LF ++ P P++V FS L++A K K + L M + + +L YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
ILI+ + +L +L + G + D+V +S+++ + + AV +M+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
G+ P+ +++ LI GL + R EA L +++++ +P L+TY +++G CK G +
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
SL M + ++P V+ + +I+ L + DAL F + + PN+ +N+L+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
C R +D +L M I P+V+T + LI +G L A L+ +M+KR + PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
+ TYS++I+G + HMF+LM P++ YN L+ K +D ++LF
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSC 609
+++ RGL + +TY T+I G+ C
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQAREC 447
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 212/477 (44%), Gaps = 57/477 (11%)
Query: 70 LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCD-----YSFLIENYVR 124
LIH L + + A + D+MV++ GC Y ++ +
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVK------------------GCQPDLVTYGIVVNGLCK 233
Query: 125 IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CV 180
G ID ++ + M I + ++ L + +V L M KG
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
Y L+ L G +A + +I+R PN+VT + ++ G++ A L+D ++
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
P++ T+S+LIN FC +L++A ++ LM+ D P+++ Y+ LI G KA R+
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
EG EL RGL + V +++++ + + A + +M++ G LP++++YSIL+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
GLC G++ A +F + ++EP + TY+ +I+G CK+GK+ DG+ L+
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF--------- 524
Query: 421 PDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG 480
CSL + G+ PN+ + T+M G CR + LF M
Sbjct: 525 -----CSLSLKGVK----------------PNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 481 MYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
PD T+ LIR G +++ L +M D T + + L G+
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGR 620
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 265/503 (52%), Gaps = 13/503 (2%)
Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN------SVGQYY 167
DY ++ N + K+D+++ +F M S +L+S + S+G+
Sbjct: 52 DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE-- 109
Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
K+ R G Y L+N R+ I A + ++++ G+ P+IVT + +L C
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
+I +A +L D ++ +G +P+ +TF+TLI+ K +A L + M++ P+L+ Y
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
++++GL K G LL ++ DVV+F++++D+ V A+ + M
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
G PNV++YS LI LC GR +A L ++ +++ P+L+T+++LID F K GK +
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
LYD+MIKR + PD + L+NG + A + F V P++ +NTL+ G
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
C+ KR D +LF M + D +T+T LI+G+ G +A +F QM+ G+ PD
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
++TYS ++ GL + L +F M+++ + DI IY ++ + K +D LF
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 583 QLTDRGLEPDIITYNTIICGYCS 605
L+ +G++P+++TYNT+I G CS
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCS 552
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 238/479 (49%), Gaps = 9/479 (1%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ LI + R +I ++ + M +G S + L++ + L M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
G+ + L++GL A + +++QRG PN+VT ++ LC G
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A +L + + + +VV F+T+I++ CK ++ A L+ M + P+++ YS LI
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
L GR + ++LL +++ + ++V F++++DA+V G A + YD M+
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
P++ +Y+ L+ G C RL +A +F ++ + P ++TY++LI GFCKS ++ DG L
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
+ M RGL D V + LI GL D A + F Q V + P++ ++ L+DG C
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
+ +++F M IK D+ +T +I G+ G + LF + +G+ P+V+T
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542
Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
Y+ +I GL + + + K M+ +G P+ YN L+ +++ + A+ +L ++
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 228/464 (49%), Gaps = 13/464 (2%)
Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
S L+ Y +I ++V + M +MG PD + L+ L N + L M
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMG--YRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
+G Y ++NGL ++G + A ++ ++ ++V N I+ LC +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
+A +LF + G +PNVVT+S+LI+ C + A QL + M+E + P+L+ ++ L
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
ID K G+ E +L + R + D+ ++S+++ + + +A Q ++ M++
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
P+V++Y+ LIKG C+ R+ + LF ++ R L +TY++LI G G +
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
++ M+ G+ PD + S+L++GL + AL F + + +++I+ T+++G C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
+ + D LF + + +KP+V+T+ +I G+ S+ L A L +M + G P+
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
TY+ +I + + + + + M D + ++ NML
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 196/401 (48%), Gaps = 5/401 (1%)
Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
R F +IL+ + ++ +A LF ++ P P++V F+ L++A K K +
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
L M +++V L Y+ILI+ + ++ LL + G + +V SS+++
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
Y + AV D+M+ G+ P+ I+++ LI GL + EA L +++ R +P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
+L+TY +++G CK G +L + M ++ D V+ + +I+ L + DAL F
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
+ + PN+ +++L+ C R +D +L M I P+++T LI +
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
G A L+ M+KR + PD+ TY+++++G + MF+ M PD+ Y
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
N L+ K ++ +LF +++ RGL D +TY T+I G
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 194/427 (45%), Gaps = 34/427 (7%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y ++ + G D ++ + M I + ++ L V L + M
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
KG Y L++ L G +A + +I++ PN+VT N ++ G+
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A L+D ++ P++ T+++L+N FC +L+KA Q++ M+ D PD++ Y+ LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
G K+ R+++G EL RGL D V +++++ GD A + + +M++ G
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
P++++YSIL+ GLC G+L +A +F + ++ + Y+++I+G CK+GK+ DG+ L
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
+ CSL + G+ PN+ +NT++ G C +
Sbjct: 528 F--------------CSLSLKGVK----------------PNVVTYNTMISGLCSKRLLQ 557
Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
+ L M P+ T+ LIR G +++ L +M D T +
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 617
Query: 531 HGLFKGK 537
+ L G+
Sbjct: 618 NMLHDGR 624
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 160/365 (43%), Gaps = 34/365 (9%)
Query: 36 NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQ----SDMRDVASHVFD 88
N I+ +L K + A+ FK PN+ + LI L SD + S + +
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 89 KMV--------------IQFGKTYNFFRLFRD----SLGDFGCDYSFLIENYVRIGKIDE 130
K + ++ GK +L+ D S+ Y+ L+ + ++D+
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 131 SVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFL 184
+ ++F +M + PD+V L+ S V +L R M +G Y L
Sbjct: 384 AKQMFEFMVSKDCF--PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
+ GL G +NA + +Q++ G P+I+T + +L LC NG++ A +FD +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
K ++ ++T+I CK K++ + L+ + + P+++ Y+ +I GL L+E
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
LL + G + +++++ A++ GD + + M + F+ + + L+ +
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANML 620
Query: 365 QQGRL 369
GRL
Sbjct: 621 HDGRL 625
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 273/525 (52%), Gaps = 15/525 (2%)
Query: 99 NFFRL-----FRDSLGDFGCDYSFLIENYVR-IGKIDESVEIFAYMSDMGIYLSPDLVQR 152
+FF L + S DY ++ N + I K+D++V++F M + S +
Sbjct: 29 SFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNK 88
Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
L+S + N L M+ G Y +N R+ + A + ++++ G
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
+ P+IVT + +L C + +I +A +L D ++ +G KP+ TF+TLI+ K +A
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
L + M++ PDL+ Y +++GL K G + LL ++ DVV++++++D
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
+ A+ + M N G P+V +YS LI LC GR +A L ++ R++ P++
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQ 443
+T+S+LID F K GKL + LYD MIKR + PD S LING + +A F
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 444 SVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
+ PN+ ++TL+ G C+ KR + ++LF M + + +T+T LI G
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
+A ++F QM+ G+ P+++TY+ ++ GL K ++ + +F+ ++R+ + PDI YN+
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
++ + K ++ +LF L+ +G+ P++I YNT+I G+C S
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 246/492 (50%), Gaps = 13/492 (2%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
YS I + R ++ ++ + A M +G PD+V L++ S + L
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLG--YEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 173 MRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M G+ F L++GL A + Q++QRG P++VT ++ LC G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
I A SL + + +VV ++T+I+ CK ++ A L+ M + PD+ YS
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
LI L GR + + LL ++R + +VV FS+++DA+V G + A + YD M+
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
P++ +YS LI G C RL EA +F ++ + P+++TYS+LI GFCK+ ++ +G
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
L+ M +RGL + V + LI+G +A F Q V + + PN+ +N L+DG
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
C+ + + +F + ++PD+ T+ ++I G+ G + LF + +G++P+V
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
I Y+ +I G + + + K M+ +G P+ YN L+ +++ + +A+ +L +
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 584 LTDRGLEPDIIT 595
+ G D T
Sbjct: 599 MRSCGFAGDAST 610
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 207/410 (50%), Gaps = 6/410 (1%)
Query: 206 QRGFVPNIVTCNKILK-RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
+R F +IL+ RL ++ +A LF ++ P P++V F+ L++A K K
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
E L M + + DL YSI I+ + +L +L + G + D+V SS+
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
++ Y + AV D+M+ G+ P+ +++ LI GL + EA L Q++ R
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
+P L+TY ++++G CK G + SL M K ++ D V+ + +I+GL M DAL
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
F + + P++F +++L+ C R +D +L M I P+V+T + LI
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
+G L A L+ +M+KR + PD+ TYS++I+G + HMF+LM P++
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
Y+ L+ K ++ ++LF +++ RGL + +TY T+I G+ C
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 196/425 (46%), Gaps = 65/425 (15%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
Y+ +I+ + +D+++ +F M + GI PD+ L+SCL
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGI--RPDVFTYSSLISCL--------------- 303
Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
C Y G +A + +I+R PN+VT + ++ G++ A
Sbjct: 304 ------CNY----------GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
L+D ++ P++ T+S+LIN FC +L++A ++ LM+ D P+++ YS LI G
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
KA R++EG EL RGL + V +++++ + D A + +M++ G PN
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
+++Y+IL+ GLC+ G+L +A +F + +EP + TY+ +I+G CK+GK+ DG+ L+
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
N+ +G+ PN+ +NT++ G CR +
Sbjct: 528 NLSLKGVS------------------------------PNVIAYNTMISGFCRKGSKEEA 557
Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
L M P+ T+ LIR G ++ L +M G D T + +
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 617
Query: 533 LFKGK 537
L G+
Sbjct: 618 LHDGR 622
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/512 (30%), Positives = 271/512 (52%), Gaps = 13/512 (2%)
Query: 104 FRDSLGDFGCDYSFLIENYVR-IGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNS 162
+ S DY ++ N + I K+D++V++F M + S +L+S + N
Sbjct: 39 WERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNK 98
Query: 163 VGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
L M+ G Y +N R+ + A + ++++ G+ P+IVT +
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
+L C + +I +A +L D ++ +G KP+ TF+TLI+ K +A L + M++
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
PDL+ Y +++GL K G + LL +K +VV+F++++D+ V AV
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
+ M G PNV++Y+ LI LC GR +A L +L +++ P+++T+++LID F
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNL 453
K GKL + L++ MI+R + PD + +LLING + +A + F V +PN+
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 454 FIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQ 513
+NTL++G C+ KR D V+LF M + + +T+T +I+G G SA ++F Q
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
M+ + D++TYS ++HGL + L +FK ++++ + +I IYN ++ + K
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
+ A LF L+ ++PD++TYNT+I G CS
Sbjct: 519 VGEAWDLFCSLS---IKPDVVTYNTMISGLCS 547
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 239/500 (47%), Gaps = 51/500 (10%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
YS I + R ++ ++ + A M +G PD+V L++ S + L
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLG--YEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 173 MRGKGFCVYEF----LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M G+ F L++GL A + Q++QRG P++VT ++ LC G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
I A +L + + K NVV F+T+I++ CK +E A L+ M + P+++ Y+
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
LI+ L GR + + LL L++ + +VV F++++DA+ G + A + ++ M+
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
P+ I+Y++LI G C RL EA +F ++ + P++ TY++LI+GFCK ++ DG
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIP------------- 451
L+ M +RGL + V + +I G D+ + F+ + +P
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 452 -----------------------NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
N+FI+NT+++G C+ + + LF + +IKPDV
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDV 535
Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
+T+ +I G+ S+ L A LF +M + G P+ TY+ +I + + + + K
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595
Query: 549 MERNGVAPDIAIYNVLLNML 568
M +G D + +++ NML
Sbjct: 596 MRSSGFVGDASTISLVTNML 615
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 201/410 (49%), Gaps = 6/410 (1%)
Query: 206 QRGFVPNIVTCNKILK-RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
+R F +IL+ RL ++ +A LF ++ P P++V F+ L++A K K
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
E L M + + DL YSI I+ + +L +L + G + D+V SS+
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
++ Y + AV D+M+ G+ P+ +++ LI GL + EA L Q++ R
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
+P L+TY ++++G CK G + +L + M +K + V+ + +I+ L + A+
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
F + + PN+ +N+L++ C R +D +L M I P+V+T LI
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
+G L A L +M++R + PD ITY+ +I+G + MFK M P+I
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
YN L+N K ++ ++LF +++ RGL + +TY TII G+ C
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 180/363 (49%), Gaps = 8/363 (2%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
++ +++ L + +E A + ++ +G PN+VT N ++ LC G+ +AS L +
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
L PNVVTF+ LI+AF KE KL +A +L+ M++ + PD I Y++LI+G RL
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
E ++ + + ++ ++++++ + V V+ + M G + N ++Y+ +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
I+G Q G A +F Q++ R+ ++TYS L+ G C GKL ++ + K +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
+ + + + +I G+ +G+A F +++ P++ +NT++ G C + +
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
LF M P+ T+ LIR +++ L +M G D T S + + L
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH 616
Query: 535 KGK 537
G+
Sbjct: 617 DGR 619
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 252 bits (644), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/487 (30%), Positives = 258/487 (52%), Gaps = 9/487 (1%)
Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
K+DE+V++F M + S +L+S + M G Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
++N L R+ + A + ++++ G+ P+IVT N +L C +I A +L D ++ +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
G +P+ VTF+TL++ + K +A L M+ PDL+ Y +I+GL K G
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
LL ++ DVV++S+V+D+ V A+ + M N G P+V +YS LI
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
LC GR +A L +L R++ P+++T++SLID F K GKL + L+D MI+R + P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
V + LING + +A + F V +P++ +NTL++G C+ K+ D ++LF
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
M + + +T+T LI G +A ++F QM+ G+ P+++TY+ ++ GL K
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
+ + +F+ ++++ + PDI YN++ + K ++ LF L+ +G++PD+I YN
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 598 TIICGYC 604
T+I G+C
Sbjct: 525 TMISGFC 531
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/586 (25%), Positives = 279/586 (47%), Gaps = 35/586 (5%)
Query: 23 SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
S+ + L+ ++A + ++K+ P P+I F ++L+ + + D+
Sbjct: 37 SRNALLHLKLDEAVDLFGEMVKSR-PFPSIVEF------------SKLLSAIAKMKKFDL 83
Query: 83 ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
+KM I G ++N + Y+ +I R ++ ++ I M +G
Sbjct: 84 VISFGEKMEI-LGVSHNLYT------------YNIMINCLCRRSQLSFALAILGKMMKLG 130
Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAF 198
S + L++ N + + L M G+ + L++GL + A
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
+ +++ +G P++VT ++ LC G+ A +L + + + +VV +ST+I++
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
CK ++ A L+ M + PD+ YS LI L GR + + LL L+R + +V
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
V F+S++DA+ G + A + +D M+ PN+++Y+ LI G C RL EA +F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM---- 434
++ + P ++TY++LI+GFCK+ K+ DG L+ +M +RGL + V + LI+G
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 435 -GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
+A F Q V + PN+ +NTL+DG C+ + + +F + ++PD+ T+ +
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
+ G+ G + LF + +G+ PDVI Y+ +I G K +F M+ +G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
PD YN L+ +++ + A+ +L ++ D TY +
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 203/398 (51%), Gaps = 5/398 (1%)
Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
K+ + ++ ++ A LF ++ P P++V FS L++A K K + M
Sbjct: 34 EKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEI 93
Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
+ + +L Y+I+I+ L + +L +L + G +V +S+++ + +
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
AV D+M+ G+ P+ ++++ L+ GL Q + EA L +++++ +P L+TY ++I+
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
G CK G+ +L + M K ++ D V+ S +I+ L + DAL F + + P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
++F +++L+ C R +D +L M I P+V+T LI A +G L A LF
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
+M++R + P+++TY+++I+G + +F LM PD+ YN L+N K
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
+ ++LF ++ RGL + +TY T+I G+ + C
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 202/425 (47%), Gaps = 65/425 (15%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
YS +I++ + +D+++ +F M + GI PD+ L+SCL
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGI--RPDVFTYSSLISCL--------------- 285
Query: 173 MRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
C Y G +A + +++R PN+VT N ++ G++ A
Sbjct: 286 ------CNY----------GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
LFD ++ PN+VT+++LIN FC +L++A Q++ LM+ D +PD++ Y+ LI+G
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
KA ++ +G EL RGL + V +++++ + D A + +M++ G PN
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
+++Y+ L+ GLC+ G+L +A +F + ++EP + TY+ + +G CK+GK+ DG+ L+
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 413 NMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
++ +G+KPD + +NT++ G C+ +
Sbjct: 510 SLSLKGVKPDVIA------------------------------YNTMISGFCKKGLKEEA 539
Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
LF+ M PD T+ LIR G +++ L +M D TY +
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Query: 533 LFKGK 537
L G+
Sbjct: 600 LHDGR 604
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 252 bits (643), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 256/487 (52%), Gaps = 9/487 (1%)
Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR----GKGFCVYE 182
K+D++V++F M S +L+S + N L M+ Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
L+N R+ + A + ++++ G+ P+IVT + +L C +I A +L D + ++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
+PN VTF+TLI+ K +A L + M+ PDL Y +++GL K G +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
LL ++ DVV++++++DA +V A+ + M N G PNV++Y+ LI+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
LC GR +A L ++ R++ P+++T+S+LID F K GKL + LYD MIKR + PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
S LING + +A F + PN+ +NTL+ G C+ KR + ++LF
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
M + + +T+ LI+G+ G A +F +M+ G+ PD+ITYS ++ GL K
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
+ L +F+ ++++ + PDI YN+++ + K ++ LF L+ +G++P++I Y
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 598 TIICGYC 604
T+I G+C
Sbjct: 540 TMISGFC 546
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 201/398 (50%), Gaps = 5/398 (1%)
Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
K+ + + ++ ++ +A LF ++ P P++V F+ L++A K K + L M
Sbjct: 49 EKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN 108
Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
+ + DL Y+ILI+ + +L +L + G + D+V SS+++ Y +
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 168
Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
AV D+M + PN ++++ LI GL + EA L +++ R +P L TY ++++
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
G CK G + SL M K ++ D V+ + +I+ L + DAL F + + P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
N+ +N+L+ C R +D +L M I P+V+T + LI +G L A L+
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
+M+KR + PD+ TYS++I+G + HMF+LM P++ YN L+ K
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
++ ++LF +++ RGL + +TYNT+I G C
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 227/462 (49%), Gaps = 9/462 (1%)
Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
S L+ Y +I E+V + M M + L+ L N + L M
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 176 KG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
+G Y ++NGL ++G I+ A + +++ + ++V I+ LC + +
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
A +LF + G +PNVVT+++LI C + A +L + M+E + P+++ +S LID
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
K G+L E +L + R + D+ +SS+++ + + A ++ M++ P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
NV++Y+ LIKG C+ R+ E LF ++ R L + +TY++LI G ++G ++
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 412 DNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
M+ G+ PD + S+L++GL + AL F + + P+++ +N +++G C+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
+ D LF + + +KP+VI +T +I G +G A LF +M + G P+ TY
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
+ +I + + + + K M G D + ++++NML
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 218/472 (46%), Gaps = 47/472 (9%)
Query: 70 LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
LIH L + A + D+MV + G + F Y ++ + G ID
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVAR-GCQPDLFT------------YGTVVNGLCKRGDID 237
Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLM 185
++ + M I + ++ L + +V L M KG Y L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 186 NGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPK 245
L G +A + +I+R PN+VT + ++ G++ A L+D ++
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 246 PNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNEL 305
P++ T+S+LIN FC +L++A ++ LM+ D P+++ Y+ LI G KA R++EG EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 306 LLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQ 365
RGL + V +++++ GD A + + +M++ G P++I+YSIL+ GLC+
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 366 QGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
G+L +A +F + ++EP + TY+ +I+G CK+GK+ DG+ L+
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF-------------- 523
Query: 426 CSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIK 485
CSL + G+ PN+ I+ T++ G CR + LF M
Sbjct: 524 CSLSLKGVK----------------PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 486 PDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
P+ T+ LIR G +++ L +M G D T S +I+ L G+
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
YS LI + ++DE+ +F M + + L+ + V + +L R M
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
+G Y L+ GL + G + A + ++++ G P+I+T + +L LC G++
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A +F+ L +P++ T++ +I CK K+E + L+ + + P++IIY+ +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
G + G +E + L + G + +++++ A + GD + + M + GF+
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 351 PNVISYSILIKGLCQQGRLVEA 372
+ + S++I L GRL ++
Sbjct: 603 GDASTISMVINML-HDGRLEKS 623
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 136/348 (39%), Gaps = 68/348 (19%)
Query: 9 LTVWRSINKCYC-----SESKTHISDLQFNQAN-------AILANLIKTNNPTPAIQFFK 56
+ + S+ +C C S++ +SD+ + N A++ +K A + +
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 57 WTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGC 113
P+I + LI+ D D A H+F+ M+ +D +
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI------------SKDCFPNV-V 396
Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
Y+ LI+ + + +++E +E+F MS G+ + L+ L + K+ + M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
G Y L++GL + G +E A + + + P+I T N +++ +C G++
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 230 GNASSLFDVLLLVGPKPNVV-----------------------------------TFSTL 254
+ LF L L G KPNV+ T++TL
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
I A ++ + +L M V D S++I+ + GRL++
Sbjct: 577 IRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 623
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 263/500 (52%), Gaps = 9/500 (1%)
Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
DY ++ N + K+D+++ +F M S +L+S + L M
Sbjct: 52 DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 174 RGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
+ G Y L+N R+ I A + ++++ G+ P+IVT + +L C +I
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
+A +L D ++ +G +P+ +TF+TLI+ K +A L + M++ P+L+ Y ++
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
++GL K G + LL ++ +VV++S+V+D+ A+ + M N G
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
PNVI+YS LI LC R +A L ++ R++ P+++T+++LID F K GKL +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
LYD MIKR + PD S LING + +A F + PN+ +NTL++G C
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
+ KR + V+LF M + + +T+T LI G +A ++F QM+ G+ P+++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
TY+ ++ GL K + + +F+ ++R+ + P I YN+++ + K ++ LF L
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 585 TDRGLEPDIITYNTIICGYC 604
+ +G++PD+I YNT+I G+C
Sbjct: 532 SLKGVKPDVIIYNTMISGFC 551
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 204/408 (50%), Gaps = 5/408 (1%)
Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
R F +IL+ + ++ +A LF ++ P P++ F+ L++A K K +
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
L M + + +L Y+ILI+ + ++ LL + G + +V SS+++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
Y + AV D+M+ G+ P+ I+++ LI GL + EA L +++ R +P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
+L+TY +++G CK G + F+L + M ++ + V+ S +I+ L DAL F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
+ + PN+ +++L+ C +R +D +L M I P+V+T LI +
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
G L A L+ +M+KR + PD+ TYS++I+G + HMF+LM P++ Y
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
N L+N K +D ++LF +++ RGL + +TY T+I G+ C
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 172/325 (52%), Gaps = 31/325 (9%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
YS +I++ + D+++ +F M + G+ + L+SCL
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL----------------- 305
Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
C YE +A + +I+R PN+VT N ++ G++ A
Sbjct: 306 ----CNYERW----------SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
L+D ++ P++ T+S+LIN FC +L++A ++ LM+ D P+++ Y+ LI+G
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
KA R+ EG EL RGL + V +++++ + D A + +M++ G PN++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
+Y+ L+ GLC+ G+L +A +F + ++EP++ TY+ +I+G CK+GK+ DG+ L+ ++
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 415 IKRGLKPDAVVCSLLINGLMGDALR 439
+G+KPD ++ + +I+G L+
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLK 556
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 237/431 (54%), Gaps = 5/431 (1%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
Y L+N R+ I A + ++++ G+ P+IVT + +L C +I +A +L D +
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
+ +G +P+ +TF+TLI+ K +A L + M++ P+L+ Y ++++GL K G +
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
LL ++ DVV+F++++D+ V A+ + M G PNV++YS L
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
I LC GR +A L ++ +++ P+L+T+++LID F K GK + L+D+MIKR +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
PD + LING + A + F V P+L +NTL+ G C+ KR D +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
LF M + D +T+T LI+G+ G +A +F QM+ G+ PD++TYS ++ GL
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
+ L +F M+++ + DI IY ++ + K +D LF L+ +G++P+++
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 595 TYNTIICGYCS 605
TYNT+I G CS
Sbjct: 467 TYNTMISGLCS 477
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 238/479 (49%), Gaps = 9/479 (1%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ LI + R +I ++ + M +G S + L++ + L M
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 107
Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
G+ + L++GL A + +++QRG PN+VT ++ LC G I
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A +L + + + +VV F+T+I++ CK ++ A L+ M + P+++ YS LI
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
L GR + ++LL +++ + ++V F++++DA+V G A + +D M+
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
P++ +Y+ LI G C RL +A +F ++ + P L TY++LI GFCKS ++ DG L
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
+ M RGL D V + LI GL D A + F Q V + P++ ++ L+DG C
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
+ +++F M IK D+ +T +I G+ G + LF + +G+ P+V+T
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
Y+ +I GL + + + K M+ +G PD YN L+ +++ + A+ +L ++
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 229/464 (49%), Gaps = 13/464 (2%)
Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAM 173
S L+ Y +I ++V + M +MG PD + L+ L N + L M
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMG--YRPDTITFTTLIHGLFLHNKASEAVALVDRM 141
Query: 174 RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
+G Y ++NGL ++G I+ AF++ ++ ++V N I+ LC +
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
+A +LF + G +PNVVT+S+LI+ C + A QL + M+E + P+L+ ++ L
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
ID K G+ E +L + R + D+ ++S+++ + + +A Q ++ M++
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
P++ +Y+ LIKG C+ R+ + LF ++ R L +TY++LI G G +
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 410 LYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
++ M+ G+ PD + S+L++GL + AL F + + +++I+ T+++G C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
+ + D LF + + +KP+V+T+ +I G+ S+ L A L +M + G PD
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
TY+ +I + + + + + M D + ++ NML
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 180/364 (49%), Gaps = 5/364 (1%)
Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
P P++ F+ L++A K K + L M + + +L Y+ILI+ + ++
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
LL + G + +V SS+++ Y + AV D+M+ G+ P+ I+++ LI GL
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
+ EA L +++ R +P+L+TY +++G CK G + F+L + M ++ D
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
V+ + +I+ L + DAL F + + PN+ +++L+ C R +D +L
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
M I P+++T LI +G A L M+KR + PD+ TY+++I+G
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
+ MF+ M PD+ YN L+ K ++ +LF +++ RGL D +TY T
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 599 IICG 602
+I G
Sbjct: 366 LIQG 369
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 192/427 (44%), Gaps = 34/427 (7%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y ++ + G ID + + M I + ++ L V L + M
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
KG Y L++ L G +A + +I++ PN+VT N ++ G+
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A L D ++ P++ T+++LIN FC +L+KA Q++ M+ D PDL Y+ LI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
G K+ R+++G EL RGL D V +++++ GD A + + +M++ G
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
P++++YSIL+ GLC G+L +A +F + ++ + Y+++I+G CK+GK+ DG+ L
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
+ CSL + G+ PN+ +NT++ G C +
Sbjct: 453 F--------------CSLSLKGVK----------------PNVVTYNTMISGLCSKRLLQ 482
Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
+ L M PD T+ LIR G +++ L +M D T +
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 542
Query: 531 HGLFKGK 537
+ L G+
Sbjct: 543 NMLHDGR 549
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%)
Query: 445 VRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
V+ +P++F FN L+ ++K+ + L M I ++ T+ +LI + +
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVL 564
S A+ L +M+K G P ++T S++++G GK IS + + M G PD + L
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 565 LNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
++ L A+ L ++ RG +P+++TY ++ G C
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 51/91 (56%)
Query: 514 MLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECN 573
M+K P + ++ ++ + K K + + + + M+R G++ ++ YN+L+N +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 574 LDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
+ AL L G++ G EP I+T ++++ GYC
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYC 91
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 255/491 (51%), Gaps = 9/491 (1%)
Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
K+D++V +F M + S +L+S + N L M+ G Y
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
L+N R+ + A + ++++ G+ PNIVT + +L C + +I A +L D + +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
G +PN VTF+TLI+ K +A L + M+ PDL+ Y ++++GL K G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
LL L+ V+++++++D + A+ + M G PNV++YS LI
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
LC GR +A L ++ R++ P + T+S+LID F K GKL + LYD M+KR + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
V S LING + +A + F V P++ +NTL+ G C+ KR + +++F
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
M + + +T+ +LI+G+ G A +F +M+ G+ P+++TY+ ++ GL K
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
+ + +F+ ++R+ + P I YN+++ + K ++ LF L+ +G++PD++ YN
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 598 TIICGYCSLNS 608
T+I G+C S
Sbjct: 541 TMISGFCRKGS 551
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 147/584 (25%), Positives = 283/584 (48%), Gaps = 39/584 (6%)
Query: 23 SKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDV 82
S+ +S+L+ + A A+ ++K+ P P+I F ++L+ + + + DV
Sbjct: 53 SRNGLSELKLDDAVALFGEMVKSR-PFPSIIEF------------SKLLSAIAKMNKFDV 99
Query: 83 ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
+ ++M G +N + YS LI + R ++ ++ + M +G
Sbjct: 100 VISLGEQMQ-NLGIPHNHYT------------YSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 143 IYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIEN 196
P++V L++ S + + L M G+ + L++GL
Sbjct: 147 --YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
A + +++ +G P++VT ++ LC G A +L + + +P V+ ++T+I+
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
CK ++ A L+ M + P+++ YS LI L GR + + LL ++R +
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
DV FS+++DA+V G + A + YD M+ P++++YS LI G C RL EA +F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-- 434
++ + P ++TY++LI GFCK ++ +G ++ M +RGL + V ++LI GL
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 435 GD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
GD A F + V + PN+ +NTL+DG C+ + + +F + ++P + T+
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
++I G+ G + LF + +G+ PDV+ Y+ +I G + + +FK M+
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
+G P+ YN L+ +++ + +A+ +L ++ G D T
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 199/398 (50%), Gaps = 9/398 (2%)
Query: 221 KRLCING----QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
++L NG ++ +A +LF ++ P P+++ FS L++A K K + L M
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109
Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGR 336
+ + + YSILI+ + +L +L + G + ++V SS+++ Y +
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
AV D+M G+ PN ++++ LI GL + EA L +++ + +P L+TY +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIP 451
G CK G F+L + M + L+P ++ + +I+GL M DAL F + + P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
N+ +++L+ C R +D +L M I PDV T + LI +G L A L+
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 512 FQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
+M+KR + P ++TYS++I+G + MF+ M PD+ YN L+ K
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSC 609
++ +++F +++ RGL + +TYN +I G C
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 34/373 (9%)
Query: 169 LCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
L + M KG Y L++ L G +A + +I+R P++ T + ++
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
G++ A L+D ++ P++VT+S+LIN FC +L++A Q++ M+ PD++
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
Y+ LI G K R++EG E+ RGL + V ++ ++ GD A + + M
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
++ G PN+++Y+ L+ GLC+ G+L +A +F + ++EP++ TY+ +I+G CK+GK+
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
DG+ L+ N+ +G+KPD V +NT++ G C
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVA------------------------------YNTMISGFC 547
Query: 465 RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
R + LF M P+ + LIR G ++ L +M G D
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607
Query: 525 TYSAIIHGLFKGK 537
T + + L G+
Sbjct: 608 TIGLVTNMLHDGR 620
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 158/365 (43%), Gaps = 34/365 (9%)
Query: 36 NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVL-----------LQSDM-- 79
N I+ L K + A+ FK PN+ + LI L L SDM
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 80 RDVASHVFD-----KMVIQFGKTYNFFRLF----RDSLGDFGCDYSFLIENYVRIGKIDE 130
R + VF ++ GK +L+ + S+ YS LI + ++DE
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 131 SVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFL 184
+ ++F +M + PD+V L+ V + ++ R M +G Y L
Sbjct: 380 AKQMFEFMVSKHCF--PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
+ GL + G + A + ++++ G PNI+T N +L LC NG++ A +F+ L
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
+P + T++ +I CK K+E + L+ + + PD++ Y+ +I G + G +E +
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
L + G + +++++ A + GD + + M + GF + + L+ +
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNML 616
Query: 365 QQGRL 369
GRL
Sbjct: 617 HDGRL 621
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 251/487 (51%), Gaps = 9/487 (1%)
Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
K D+++++F M + RL S + + LC+ M KG
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
++N R + AF ++I+ G+ PN +T + ++ LC+ G++ A L D ++ +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
G KP+++T +TL+N C K +A L + M+E P+ + Y +++ + K+G+
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
ELL +R +KLD V +S ++D G + A ++ M G N+I+Y+ILI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
C GR + L ++ R++ P+++T+S LID F K GKLR+ L+ MI RG+ PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
+ + LI+G + A + V PN+ FN L++G C+ R D ++LF
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
M + + D +T+ LI+G G L+ A LF +M+ R + P+++TY ++ GL
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
L +F+ +E++ + DI IYN++++ + +D A LF L +G++P + TYN
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 598 TIICGYC 604
+I G C
Sbjct: 548 IMIGGLC 554
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 228/461 (49%), Gaps = 40/461 (8%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
+ L+NGL +G + A + ++++ G P+++T N ++ LC++G+ A L D +
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 240 LLVGPKPNVVTF-----------------------------------STLINAFCKEAKL 264
+ G +PN VT+ S +I+ CK L
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
+ AF L+N M + ++I Y+ILI G AGR +G +LL + R + +VV FS +
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
+D++V G + A + + M++ G P+ I+Y+ LI G C++ L +A + ++ +
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
+P++ T++ LI+G+CK+ ++ DG L+ M RG+ D V + LI G + A
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
F + V + PN+ + L+DG C + +++F + ++ D+ + ++I G+
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
+ + A LF + +G+ P V TY+ +I GL K +S +F+ ME +G APD
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
YN+L+ + + + ++KL +L G D T +I
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 241/465 (51%), Gaps = 13/465 (2%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
+S LI G++ E++E+ M +MG PDL+ L++ L S + L
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMG--HKPDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M G Y ++N + + G A + R++ +R + V + I+ LC +G
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+ NA +LF+ + + G N++T++ LI FC + + +L M++ + P+++ +S+
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
LID K G+L+E EL + RG+ D + ++S++D + + +A Q D M++ G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
PN+ +++ILI G C+ R+ + LF ++ +R + +TY++LI GFC+ GKL
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGC 463
L+ M+ R + P+ V +L++GL + AL F + + + ++ I+N ++ G
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
C + D LF + + +KP V T+ ++I G+ +G LS A LLF +M + G PD
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
TY+ +I + + + + + ++R G + D + ++++ML
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 205/427 (48%), Gaps = 44/427 (10%)
Query: 189 LRKGVIE----NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
LR G+++ +A + R +I +P ++ +++ + Q +L + L G
Sbjct: 60 LRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGI 119
Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
N+ T S +IN FC+ KL AF ++++ P+ I +S LI+GL GR
Sbjct: 120 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR------ 173
Query: 305 LLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLC 364
V A++ DRM+ G P++I+ + L+ GLC
Sbjct: 174 -----------------------------VSEALELVDRMVEMGHKPDLITINTLVNGLC 204
Query: 365 QQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAV 424
G+ EA L +++ +P+ +TY +++ CKSG+ L M +R +K DAV
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 425 VCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM 479
S++I+GL + +A F + + N+ +N L+ G C R D KL M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 480 GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
I P+V+T +VLI +G L A L +M+ RG+ PD ITY+++I G K ++
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 540 SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTI 599
M LM G P+I +N+L+N K +D L+LF +++ RG+ D +TYNT+
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 600 ICGYCSL 606
I G+C L
Sbjct: 445 IQGFCEL 451
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 211/421 (50%), Gaps = 9/421 (2%)
Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----Y 181
GK E++ + M + G + +++ + S +L R M + + Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
+++GL + G ++NAF++ ++ +G NI+T N ++ C G+ + + L ++
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
PNVVTFS LI++F KE KL +A +L+ M+ + PD I Y+ LIDG K L +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
N+++ + +G ++ F+ +++ Y + ++ + +M G + + ++Y+ LI+
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
G C+ G+L A LF +++ R++ P+++TY L+DG C +G+ +++ + K ++
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
D + +++I+G+ + DA F + P + +N ++ G C+ ++ LF
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
M PD T+ +LIR G + ++ L ++ + G + D T +I L G
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626
Query: 537 K 537
+
Sbjct: 627 R 627
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 176/382 (46%), Gaps = 40/382 (10%)
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
+A LF ++ P P V+ FS L +A K + + L M + +L SI+I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
+ + +L L +A+ + +KL G+
Sbjct: 131 NCFCRCRKLC----LAFSAMGKIIKL-------------------------------GYE 155
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
PN I++S LI GLC +GR+ EA L +++ +P L+T ++L++G C SGK + L
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 411 YDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
D M++ G +P+AV ++N G A+ + + + ++ ++DG C+
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
+ LF M M I ++IT+ +LI G + G L M+KR + P+V+T
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
+S +I K + + K M G+APD Y L++ KE +LD A ++ +
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 586 DRGLEPDIITYNTIICGYCSLN 607
+G +P+I T+N +I GYC N
Sbjct: 396 SKGCDPNIRTFNILINGYCKAN 417
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 151/333 (45%), Gaps = 41/333 (12%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
+S LI+++V+ GK+ E+ E+ M GI +PD +
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGI--APDTI------------------------ 369
Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
Y L++G ++ ++ A M ++ +G PNI T N ++ C +I +
Sbjct: 370 -----TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
LF + L G + VT++TLI FC+ KL A +L+ M+ + P+++ Y IL+DGL
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
G ++ E+ ++LD+ +++ ++ V A + + G P V
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFS 409
+Y+I+I GLC++G L EA ++L R++E P TY+ LI G
Sbjct: 545 TYNIMIGGLCKKGPLSEA-----ELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 599
Query: 410 LYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
L + + + G DA ++I+ L L+ F
Sbjct: 600 LIEELKRCGFSVDASTIKMVIDMLSDGRLKKSF 632
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 452 NLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLF 511
NL+ + +++ CR ++ + +P+ IT + LI G+ +G +S A+ L
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 512 FQMLKRGLTPDVITYSAIIHGL-FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
+M++ G PD+IT + +++GL GK L + K++E G P+ Y +LN++ K
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCK 240
Query: 571 ECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
A++L ++ +R ++ D + Y+ II G C S
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 242 bits (618), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 258/491 (52%), Gaps = 9/491 (1%)
Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYE 182
K+++++++F M +P RL S + + C+ M G
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
++N RK + AF + + + G+ P+ +T + ++ C+ G++ A +L D ++ +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
+P++VT STLIN C + ++ +A L + M+E PD + Y +++ L K+G
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
+L +R +K VV +S V+D+ G A+ ++ M G +V++YS LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
LC G+ + + +++ R + P ++T+S+LID F K GKL + LY+ MI RG+ PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
+ + LI+G + +A + F V P++ ++ L++ C+ KR D ++LF
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
+ + P+ IT+ L+ G G L++A LF +M+ RG+ P V+TY ++ GL
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
++ L +F+ M+++ + I IYN++++ + +D A LF L+D+G++PD++TYN
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 598 TIICGYCSLNS 608
+I G C S
Sbjct: 530 VMIGGLCKKGS 540
Score = 231 bits (590), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 224/426 (52%), Gaps = 5/426 (1%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
+ L+NG +G + A + ++++ P++VT + ++ LC+ G++ A L D +
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
+ G +P+ VT+ ++N CK A L+ M E ++ ++ YSI+ID L K G
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
+ L +G+K DVV +SS++ G + M+ +P+V+++S L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
I ++G+L+EA L+ +++ R + P +TY+SLIDGFCK L + ++D M+ +G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
+PD V S+LIN + D +R F + LIPN +NTL+ G C+ + +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
LF M + P V+T+ +L+ G+ G L+ A+ +F +M K +T + Y+ IIHG+
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
+ +F + GV PD+ YNV++ L K+ +L A LF ++ + G PD
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 561
Query: 595 TYNTII 600
TYN +I
Sbjct: 562 TYNILI 567
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 247/467 (52%), Gaps = 17/467 (3%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
+S L+ + G++ E+V + M +M PDLV L++ L V + L
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEM--KQRPDLVTVSTLINGLCLKGRVSEALVLIDR 200
Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M GF Y ++N L + G A + R++ +R ++V + ++ LC +G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+A SLF+ + + G K +VVT+S+LI C + K + ++ M+ +++PD++ +S
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
LID K G+L E EL + RG+ D + ++S++D + + A Q +D M++ G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
P++++YSILI C+ R+ + LF ++ + L P+ +TY++L+ GFC+SGKL
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF--FQSVRMTLIPNLFIFNTLMD 461
L+ M+ RG+ P V +L++GL + AL F Q RMTL + I+N ++
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL--GIGIYNIIIH 498
Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
G C + D LF + +KPDV+T+ V+I G+ +GSLS A +LF +M + G TP
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
D TY+ +I G + + + + M+ G + D + ++++ML
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 241 bits (616), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 250/493 (50%), Gaps = 13/493 (2%)
Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFC----V 180
K D++V++F M+ P L+ RL S + + LC+ M KG
Sbjct: 52 KEDDAVDLFQEMTRS--RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109
Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
++N R + AF ++I+ G+ P+ VT + ++ LC+ G++ A L D ++
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
+G KP ++T + L+N C K+ A L + M+E P+ + Y ++ + K+G+
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
ELL +R +KLD V +S ++D G + A ++ M GF ++I Y+ LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
+G C GR + L ++ R++ P ++ +S+LID F K GKLR+ L+ MI+RG+
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
PD V + LI+G + A V PN+ FN L++G C+ D ++L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
F M + + D +T+ LI+G G L A LF +M+ R + PD+++Y ++ GL
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
L +F+ +E++ + DI IYN++++ + +D A LF L +G++PD+ T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 596 YNTIICGYCSLNS 608
YN +I G C S
Sbjct: 530 YNIMIGGLCKKGS 542
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 222/426 (52%), Gaps = 5/426 (1%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
+ L+NGL +G + A + ++++ G P ++T N ++ LC+NG++ +A L D +
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
+ G +PN VT+ ++ CK + A +L M E + D + YSI+IDGL K G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
L +G K D++++++++ + G + M+ P+V+++S L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
I ++G+L EA L +++ R + P +TY+SLIDGFCK +L + D M+ +G
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 420 KPDAVVCSLLING-----LMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
P+ ++LING L+ D L F + ++ + +NTL+ G C L + +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
LF M ++PD++++ +L+ G+ G A+ +F ++ K + D+ Y+ IIHG+
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
+ +F + GV PD+ YN+++ L K+ +L A LF ++ + G P+
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563
Query: 595 TYNTII 600
TYN +I
Sbjct: 564 TYNILI 569
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 219/422 (51%), Gaps = 5/422 (1%)
Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
L+NGL G + +A + ++++ GF PN VT +LK +C +GQ A L +
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
K + V +S +I+ CK+ L+ AF L+N M D+IIY+ LI G AGR +G
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
+LL + R + DVV FS+++D +V G + A + + M+ G P+ ++Y+ LI G
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
C++ +L +A + ++ + P++ T++ LI+G+CK+ + DG L+ M RG+ D
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
V + LI G + A F + V + P++ + L+DG C +++F
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
+ ++ D+ + ++I G+ + + A LF + +G+ PDV TY+ +I GL K +
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
+S +F+ ME +G +P+ YN+L+ + E + + KL ++ G D T
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602
Query: 599 II 600
++
Sbjct: 603 VV 604
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 240/463 (51%), Gaps = 9/463 (1%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
+S LI G++ E++E+ M +MG + + L++ L + V L M
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
GF Y ++ + + G A + R++ +R + V + I+ LC +G +
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
NA +LF+ + + G K +++ ++TLI FC + + +L M++ + PD++ +S LI
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
D K G+L+E EL + RG+ D V ++S++D + + +A D M++ G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
PN+ +++ILI G C+ + + LF ++ +R + +TY++LI GFC+ GKL L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
+ M+ R ++PD V +L++GL + AL F + + + ++ I+N ++ G C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
+ D LF + + +KPDV T+ ++I G+ +GSLS A LLF +M + G +P+ T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
Y+ +I + + + + ++R G + D + ++++ML
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 167/358 (46%), Gaps = 12/358 (3%)
Query: 95 GKTYNFFRLFRD-SLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
G N F LF + + F D Y+ LI + G+ D+ ++ M I +PD+V
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI--TPDVV 318
Query: 151 --QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQV 204
L+ C V + + +L + M +G Y L++G ++ ++ A HM +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
+ +G PNI T N ++ C I + LF + L G + VT++TLI FC+ KL
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
E A +L+ M+ + PD++ Y IL+DGL G ++ E+ ++LD+ +++ +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
+ V A + + G P+V +Y+I+I GLC++G L EA LF ++
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
P+ TY+ LI G L + + + G DA ++++ L L+ F
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 227/426 (53%), Gaps = 5/426 (1%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
++ L+NGL + + A + ++++ G P ++T N ++ LC+NG++ +A L D +
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
+ G +PN VT+ ++N CK + A +L M E ++ D + YSI+IDGL K G L
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
L +G K D++ +++++ + G + M+ PNV+++S+L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
I ++G+L EA L +++ R + P+ +TY+SLIDGFCK +L + + D MI +G
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
PD + ++LING + D L F + +I N +NTL+ G C+ + K
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
LF M ++PD++++ +L+ G+ G L A+ +F ++ K + D+ Y IIHG+
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
+ +F + GV D YN++++ L ++ +L A LF ++T+ G PD +
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 595 TYNTII 600
TYN +I
Sbjct: 580 TYNILI 585
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 247/491 (50%), Gaps = 9/491 (1%)
Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
K D++V++F M + RL S + + LC+ M KG
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
++N R + AF ++++ G+ P+ V N +L LC+ ++ A L D ++ +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
G KP ++T +TL+N C K+ A L + M+E P+ + Y +++ + K+G+
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
ELL +R +KLD V +S ++D G + A ++ M GF ++I+Y+ LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
C GR + L ++ R++ P+++T+S LID F K GKLR+ L M++RG+ P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
+ + LI+G + +A++ + P++ FN L++G C+ R D ++LF
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
M + + + +T+ L++G G L A LF +M+ R + PD+++Y ++ GL
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
+ L +F +E++ + DI IY ++++ + +D A LF L +G++ D YN
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Query: 598 TIICGYCSLNS 608
+I C +S
Sbjct: 548 IMISELCRKDS 558
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 239/451 (52%), Gaps = 9/451 (1%)
Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYE 182
++ E++E+ M +MG + + L++ L + V L M GF Y
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
++N + + G A + R++ +R + V + I+ LC +G + NA +LF+ + +
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
G K +++T++TLI FC + + +L M++ + P+++ +S+LID K G+L+E
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
++LL + RG+ + + ++S++D + + A+Q D M++ G P++++++ILI G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
C+ R+ + LF ++ +R + + +TY++L+ GFC+SGKL L+ M+ R ++PD
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
V +L++GL + AL F + + + ++ I+ ++ G C + D LF
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
+ + +K D + ++I + + SLS A +LF +M + G PD +TY+ +I
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
+ + + + M+ +G D++ +++NML
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 209/421 (49%), Gaps = 9/421 (2%)
Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----Y 181
GK+ ++V + M + G + +++ + S +L R M + + Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
+++GL + G ++NAF++ ++ +GF +I+T N ++ C G+ + + L ++
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
PNVVTFS LI++F KE KL +A QL MM+ + P+ I Y+ LIDG K RL+E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
+++ + +G D++ F+ +++ Y + ++ + M G + N ++Y+ L++
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
G CQ G+L A LF +++ RR+ P +++Y L+DG C +G+L ++ + K ++
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
D + ++I+G+ + DA F + + +N ++ CR + LF
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
M PD +T+ +LIR ++A L +M G DV T +I+ L G
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Query: 537 K 537
+
Sbjct: 627 E 627
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 158/326 (48%), Gaps = 4/326 (1%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
YS +I+ + G +D + +F M G L+ ++ KL R M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 175 GK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
+ + L++ +++G + A + ++++QRG PN +T N ++ C ++
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A + D+++ G P+++TF+ LIN +CK +++ +L+ M ++ + + Y+ L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
G ++G+L+ +L + R ++ D+V + ++D G++ +A++ + ++
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
++ Y I+I G+C ++ +A LF + ++ ++ Y+ +I C+ L L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD 436
+ M + G PD + ++LI +GD
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGD 591
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 159/358 (44%), Gaps = 12/358 (3%)
Query: 95 GKTYNFFRLFRD-SLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
G N F LF + + F D Y+ LI + G+ D+ ++ M I SP++V
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI--SPNVV 334
Query: 151 --QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQV 204
L+ V + + +L + M +G Y L++G ++ +E A M +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 205 IQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKL 264
I +G P+I+T N ++ C +I + LF + L G N VT++TL+ FC+ KL
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
E A +L+ M+ + PD++ Y IL+DGL G L++ E+ ++LD+ ++ +
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
+ V A + + G + +Y+I+I LC++ L +A LF ++
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
P LTY+ LI L + M G D ++IN L L F
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSF 632
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 243/464 (52%), Gaps = 12/464 (2%)
Query: 153 LMSCLVDSNSVGQYYKLCRAM---RGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVI 205
L+ L D N + +L M RG G Y ++NG ++G + A+ + +++
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
RG +P++VT N I+ LC + A + + ++ G P+ +T++++++ +C + +
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 283
Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVM 325
+A M + PD++ YS+L+D L K GR E ++ + RGLK ++ + +++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Query: 326 DAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLE 385
Y G + D M+ G P+ +SILI +QG++ +A +F ++ + L
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 403
Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRF 440
P+ +TY ++I CKSG++ D ++ MI GL P +V + LI+GL A
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463
Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
+ + + N FN+++D C+ R ++ KLF LM +KP+VIT+ LI G
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523
Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
G + A+ L M+ GL P+ +TYS +I+G K + L +FK ME +GV+PDI
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583
Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
YN++L L + AA +L+ ++T+ G + ++ TYN I+ G C
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 153/543 (28%), Positives = 269/543 (49%), Gaps = 34/543 (6%)
Query: 83 ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDY-SFLIENYVRIGKI--DESVEIFAYMS 139
A HVFD++ ++ G+ + + L R +L D D + + Y R+ + DE
Sbjct: 34 ARHVFDEL-LRRGRGASIYGLNR-ALADVARDSPAAAVSRYNRMARAGADE--------- 82
Query: 140 DMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKGV 193
++PDL L+ C + + + + KGF V + L+ GL
Sbjct: 83 -----VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR 137
Query: 194 IENAFHM-HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV---GPKPNVV 249
+A + R++ + G +PN+ + N +LK LC + A L ++ G P+VV
Sbjct: 138 TSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVV 197
Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
+++T+IN F KE +KA+ Y+ M++ ++PD++ Y+ +I L KA + + E+L T
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257
Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
+ G+ D + ++S++ Y G A+ +M + G P+V++YS+L+ LC+ GR
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
+EA +F + R L+P + TY +L+ G+ G L + L D M++ G+ PD V S+L
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Query: 430 I-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNI 484
I G + A+ F + + L PN + ++ C+ R D + F M +
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 485 KPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLH 544
P I + LI G+ + A L +ML RG+ + I +++II K +
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 545 MFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
+F+LM R GV P++ YN L+N +D A+KL + GL+P+ +TY+T+I GYC
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 605 SLN 607
++
Sbjct: 558 KIS 560
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 249/493 (50%), Gaps = 13/493 (2%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
Y+ +I + + G D++ + M D GI PD+V +++ L + ++ + ++
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGIL--PDVVTYNSIIAALCKAQAMDKAMEVLNT 256
Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M G Y +++G G + A +++ G P++VT + ++ LC NG+
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
A +FD + G KP + T+ TL+ + + L + L +LM+ + PD ++SI
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
LI K G++ + + +GL + V + +V+ G V A+ +++M++ G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
P I Y+ LI GLC + A L ++L R + + + ++S+ID CK G++ +
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 409 SLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
L++ M++ G+KP+ + + LING M +A++ V + L PN ++TL++G
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
C++ R D + LF M + PD+IT+ ++++G+ ++A L+ ++ + G ++
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
TY+ I+HGL K K L MF+ + + + +N++++ L+K D A LF
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676
Query: 584 LTDRGLEPDIITY 596
+ GL P+ TY
Sbjct: 677 FSSNGLVPNYWTY 689
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 223/482 (46%), Gaps = 29/482 (6%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
Y+ ++ Y G+ E++ M G+ PD+V LM L + + K+ +
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGV--EPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M +G Y L+ G KG + + +++ G P+ + ++ G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+ A +F + G PN VT+ +I CK ++E A + M++ L P I+Y+
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
LI GL + + EL+L LDRG+ L+ + F+S++D++ G V + + ++ M+ G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
PNVI+Y+ LI G C G++ EA L ++ L+P+ +TYS+LI+G+CK ++ D
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI------------- 455
L+ M G+ PD + ++++ GL FQ+ R L++
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGL--------FQTRRTAAAKELYVRITESGTQIELST 618
Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
+N ++ G C+ K D +++F + + ++K + T ++I + G A LF
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 678
Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
GL P+ TY + + + +F ME NG D + N ++ L++ +
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEIT 738
Query: 576 AA 577
A
Sbjct: 739 RA 740
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 122/237 (51%), Gaps = 9/237 (3%)
Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
+ P L TY LI C++G+L GF+ N+IK+G + DA+ + L+ GL D
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 443 QSV---RMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMG---MYNIKPDVITHTV 493
+ RMT IPN+F +N L+ G C R+ + ++L +M PDV+++T
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
+I G +G A + +ML RG+ PDV+TY++II L K + + + + M +NG
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
V PD YN +L+ A+ ++ G+EPD++TY+ ++ C C+
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 4/286 (1%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
++ +I+++ + G++ ES ++F M +G+ + L++ + + + KL M
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
G Y L+NG + +E+A + +++ G P+I+T N IL+ L +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A L+ + G + + T++ +++ CK + A Q++ + MDL + ++I+I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
D L K GR E +L + GL + + + + +G G + Q + M + G
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 718
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
+ + +++ L Q+G + A + + T S ID
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 254/526 (48%), Gaps = 35/526 (6%)
Query: 94 FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
F +++F R R G DY ++ + ++D+++ +F M+ + S +L
Sbjct: 26 FPLSFSFCRR-RAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKL 84
Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
+S + N M G Y L+N R + A + ++++ G+
Sbjct: 85 LSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGY 144
Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
P+IVT N +L C +I +A +L D ++ +G KP+ VTF+TLI+ K +A
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
L + M++ PDL+ Y +++GL K G LL ++ +VV++S+V+D+
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
A+ + M N G PNVI+YS LI LC GR +A L ++ R++ P+L+
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTL 449
T+S+LID F K GKL LY+ MIKR + P
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP---------------------------- 356
Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAIL 509
N+F +++L++G C L R + ++ LM + P+V+T+ LI G + +
Sbjct: 357 --NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 510 LFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
LF +M +RGL + +TY+ +IHG F+ ++ +FK M GV P+I YN+LL+ L
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 570 KECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYF 615
K L A+ +F L +EPDI TYN +I G C + G +
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIY 520
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 238/490 (48%), Gaps = 39/490 (7%)
Query: 24 KTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVA 83
+T +SD++ + A + ++ + P P+I F ++L+ + + + D+
Sbjct: 51 RTGLSDIELDDAIGLFG-VMAQSRPFPSIIEF------------SKLLSAIAKMNKFDLV 97
Query: 84 SHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGI 143
+KM I G ++N + Y+ LI + R ++ ++ + M +G
Sbjct: 98 ISFGEKMEI-LGISHNLY------------TYNILINCFCRCSRLSLALALLGKMMKLG- 143
Query: 144 YLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENA 197
PD+V L++ N + L M G+ + L++GL A
Sbjct: 144 -YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
+ +++QRG P++VT ++ LC G A +L + + + NVV +ST+I++
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
CK + A L+ M + P++I YS LI L GR + + LL ++R + +
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
+V FS+++DA+V G + +A + Y+ M+ PN+ +YS LI G C RL EA +
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--- 434
++ + P+++TY++LI+GFCK+ ++ G L+ M +RGL + V + LI+G
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 435 --GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
+A F Q V + + PN+ +N L+DG C+ + + +F + ++PD+ T+
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502
Query: 493 VLIRGIASQG 502
++I G+ G
Sbjct: 503 IMIEGMCKAG 512
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/430 (31%), Positives = 228/430 (53%), Gaps = 6/430 (1%)
Query: 177 GFCVYEFLMNGLLR-KGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
G Y +++ +R K I A ++ +++++ PN+ T N +++ C G I A +L
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL 227
Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
FD + G PNVVT++TLI+ +CK K++ F+L M L P+LI Y+++I+GL +
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
GR+KE + +L RG LD V +++++ Y G+ +A+ + ML G P+VI+
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
Y+ LI +C+ G + A Q+ +R L P+ TY++L+DGF + G + + + + M
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
G P V + LING M DA+ L P++ ++T++ G CR
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
+ +++ M IKPD IT++ LI+G Q A L+ +ML+ GL PD TY+A+I
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
+ ++ L + M GV PD+ Y+VL+N L K+ A +L +L
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 591 PDIITYNTII 600
P +TY+T+I
Sbjct: 588 PSDVTYHTLI 597
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 156/599 (26%), Positives = 282/599 (47%), Gaps = 63/599 (10%)
Query: 36 NAILANLIKTN-NPTPAIQFFKWTHNCVSSPNIAQ---LIHVLLQSDMRDVASHVFDKMV 91
NA+L I++ N + A FK SPN+ LI + DVA +FDKM
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 232
Query: 92 IQFGKTYNFFRLFRDSLGDFGC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLS 146
+ GC Y+ LI+ Y ++ KID+ ++ M+ G L
Sbjct: 233 TK------------------GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG--LE 272
Query: 147 PDLVQR--LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFH----M 200
P+L+ +++ L + + + M +G+ + E N L++ E FH M
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 201 HRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCK 260
H ++++ G P+++T ++ +C G + A D + + G PN T++TL++ F +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 261 EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
+ + +A+++ M + P ++ Y+ LI+G G++++ +L ++GL DVV
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
+S+V+ + DV A++ M+ G P+ I+YS LI+G C+Q R EAC L+ ++L
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MG 435
L P TY++LI+ +C G L L++ M+++G+ PD V S+LINGL
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 436 DALRFFFQSVRMTLIPNLFIFNTLMDGCCRL--KRATDTVKLFMLMGMY----------- 482
+A R + +P+ ++TL++ C + K +K F + GM
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 483 --NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI- 539
N KPD + ++I G G + A L+ +M+K G +T A++ L K +
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Query: 540 ---SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
SV +H+ + E + + VL+ + +E N+D L + ++ G P+ I+
Sbjct: 693 ELNSVIVHVLRSCELS----EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 203/449 (45%), Gaps = 45/449 (10%)
Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
S+ + Y LC + V++ ++ R +I+ A + GF+P +++ N +L
Sbjct: 122 SLQETYDLCYSTSS----VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 177
Query: 222 RLCINGQ-IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
+ + I A ++F +L PNV T++ LI FC ++ A L++ M +
Sbjct: 178 ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL 237
Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
P+++ Y+ LIDG K L +D G KL
Sbjct: 238 PNVVTYNTLIDGYCK-----------LRKIDDGFKL------------------------ 262
Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
M G PN+ISY+++I GLC++GR+ E + ++ R +TY++LI G+CK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFI 455
G ++ M++ GL P + + LI+ G M A+ F Q L PN
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
+ TL+DG + + ++ M P V+T+ LI G G + AI + M
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
++GL+PDV++YS ++ G + ++ L + + M G+ PD Y+ L+ ++
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYC 604
A L+ ++ GL PD TY +I YC
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYC 531
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 517 RGLTPDVITYSAIIHGLFKGK-NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
G P V++Y+A++ + K NIS ++FK M + V+P++ YN+L+ N+D
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222
Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFK 616
AL LF ++ +G P+++TYNT+I GYC L ID FK
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK--IDDGFK 261
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/568 (25%), Positives = 277/568 (48%), Gaps = 45/568 (7%)
Query: 52 IQFFKWTHNCVSS--PNIAQLIHVLLQSDMRDVA----SHVFDKMVIQFGKTY-NFFRLF 104
+ FF W + S ++ +IH+ + S VA S +++ + ++ FF L
Sbjct: 105 LDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLL 164
Query: 105 RDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
+ D+G D + + V G + E+ +F M + G+ LS D SC V
Sbjct: 165 VYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVD------SCNV--- 215
Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
+ + K C A + R+ + G N+ + N ++
Sbjct: 216 YLTRLSKDCYK---------------------TATAIIVFREFPEVGVCWNVASYNIVIH 254
Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
+C G+I A L ++ L G P+V+++ST++N +C+ +L+K ++L +M L P
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 314
Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
+ IY +I L + +L E E + +G+ D VV+++++D + GD+ A + +
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
M + P+V++Y+ +I G CQ G +VEA LF ++ + LEP +T++ LI+G+CK+
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
G ++D F ++++MI+ G P+ V + LI+GL + A + ++ L PN+F +
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
N++++G C+ + VKL + D +T+T L+ G + A + +ML
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
+GL P ++T++ +++G + G + M G+AP+ +N L+ NL A
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614
Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGYC 604
A ++ + RG+ PD TY ++ G+C
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 204/417 (48%), Gaps = 5/417 (1%)
Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
Y ++NG R G ++ + + + ++G PN I+ LC ++ A F ++
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
G P+ V ++TLI+ FCK + A + + M D+ PD++ Y+ +I G + G +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
E +L +GL+ D V F+ +++ Y G + A + ++ M+ G PNV++Y+ LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
GLC++G L A L ++ L+P++ TY+S+++G CKSG + + L GL
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 421 PDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
D V + L++ G M A + + L P + FN LM+G C D KL
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
M I P+ T L++ + +L +A ++ M RG+ PD TY ++ G K
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
+N+ +F+ M+ G + ++ Y+VL+ +K A ++F Q+ GL D
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 217/435 (49%), Gaps = 6/435 (1%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING-QIGNASSLFDV 238
V++ L+ G++ A + +++ G V ++ +CN L RL + + A +F
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
VG NV +++ +I+ C+ ++++A L LM PD+I YS +++G + G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
L + +L+ +GLK + ++ S++ I + A + + M+ G LP+ + Y+
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
LI G C++G + A F ++ R + P +LTY+++I GFC+ G + + L+ M +G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
L+PD+V + LING M DA R ++ PN+ + TL+DG C+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
+L M ++P++ T+ ++ G+ G++ A+ L + GL D +TY+ ++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
K + + K M G+ P I +NVL+N L+ KL + +G+ P+
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 594 ITYNTIICGYCSLNS 608
T+N+++ YC N+
Sbjct: 597 TTFNSLVKQYCIRNN 611
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 211/452 (46%), Gaps = 34/452 (7%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
YS ++ Y R G++D+ ++ M G+ + + ++ L + + + M
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
+G VY L++G ++G I A ++ R P+++T I+ C G +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A LF + G +P+ VTF+ LIN +CK ++ AF+++N M++ P+++ Y+ LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
DGL K G L NELL GL+ ++ ++S+++ G++ AV+ G
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
+ ++Y+ L+ C+ G + +A + ++L + L+P+++T++ L++GFC G L DG L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
+ M+ +G+ P+A FN+L+ C
Sbjct: 584 LNWMLAKGIAPNATT------------------------------FNSLVKQYCIRNNLK 613
Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
++ M + PD T+ L++G ++ A LF +M +G + V TYS +I
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
G K K +F M R G+A D I++
Sbjct: 674 KGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 6/218 (2%)
Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD------ALRFFFQSVRMTLIPNLFI 455
G LR+ +++ M+ GL C++ + L D A+ F + + + N+
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
+N ++ C+L R + L +LM + PDVI+++ ++ G G L L M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
++GL P+ Y +II L + ++ F M R G+ PD +Y L++ K ++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 576 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
AA K F ++ R + PD++TY II G+C + + G
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 131/528 (24%), Positives = 257/528 (48%), Gaps = 26/528 (4%)
Query: 90 MVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDES----VEIFAYMSDMGIYL 145
++ QF + Y R + D C S I + + +G + V + + G+
Sbjct: 16 LIQQFHREYK-----RGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVESSGLNG 70
Query: 146 SPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRK----GVIENAFHMH 201
+ L S +SN G Y + F + + N LR+ G +E F
Sbjct: 71 RAQKFETLSSGYSNSNGNGHYSSV-----NSSFALEDVESNNHLRQMVRTGELEEGFKFL 125
Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
++ G VP+I+ C +++ C G+ A+ + ++L G P+V+T++ +I+ +CK
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKA 185
Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
++ A + + M + PD++ Y+ ++ L +G+LK+ E+L L R DV+ +
Sbjct: 186 GEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
+ +++A VG A++ D M + G P+V++Y++L+ G+C++GRL EA +
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGD 436
+P+++T++ ++ C +G+ D L +M+++G P V ++LIN GL+G
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
A+ + + PN +N L+ G C+ K+ ++ M PD++T+ ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 497 GIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAP 556
+ G + A+ + Q+ +G +P +ITY+ +I GL K + + M + P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 557 DIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
D Y+ L+ L +E +D A+K F + G+ P+ +T+N+I+ G C
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 221/424 (52%), Gaps = 8/424 (1%)
Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
L+ G R G A + + G VP+++T N ++ C G+I NA S+ D + +
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV-- 200
Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
P+VVT++T++ + C KL++A ++ + M++ D PD+I Y+ILI+ + +
Sbjct: 201 -SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
+LL DRG DVV ++ +++ G + A++ + M + G PNVI+++I+++ +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
C GR ++A L +L + PS++T++ LI+ C+ G L + + M + G +P++
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 424 VVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
+ + L++G M A+ + + V P++ +NT++ C+ + D V++
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
+ P +IT+ +I G+A G AI L +M + L PD ITYS+++ GL +
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
+ + F ER G+ P+ +N ++ L K D A+ + +RG +P+ +Y
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 599 IICG 602
+I G
Sbjct: 560 LIEG 563
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 242/480 (50%), Gaps = 20/480 (4%)
Query: 123 VRIGKIDESVEIFAYMSDMGIYLS-PDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKG-- 177
VR G+++E F ++ +M + + PD++ L+ + K+ + G G
Sbjct: 113 VRTGELEEG---FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 169
Query: 178 --FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFV-PNIVTCNKILKRLCINGQIGNASS 234
Y +++G + G I NA V+ R V P++VT N IL+ LC +G++ A
Sbjct: 170 PDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
+ D +L P+V+T++ LI A C+++ + A +L + M + PD++ Y++L++G+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
K GRL E + L G + +V+ + ++ + G A + ML GF P+V+
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
+++ILI LC++G L A + ++ +P+ L+Y+ L+ GFCK K+ + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 415 IKRGLKPDAV-----VCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
+ RG PD V + +L +G + DA+ Q P L +NT++DG + +
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
+KL M ++KPD IT++ L+ G++ +G + AI F + + G+ P+ +T+++I
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
+ GL K + + M G P+ Y +L+ L E AL+L +L ++GL
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 211/445 (47%), Gaps = 74/445 (16%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ +I Y + G+I+ ++ + MS +SPD+V
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMS-----VSPDVV------------------------ 205
Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
Y ++ L G ++ A + +++QR P+++T +++ C + +G+A
Sbjct: 206 -----TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
L D + G P+VVT++ L+N CKE +L++A + N M P++I ++I++ +
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVG------------------- 335
GR + +LL L +G VV F+ +++ G +G
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 336 ----------------RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
RA++ +RM++ G P++++Y+ ++ LC+ G++ +A + Q+
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----M 434
+ P L+TY+++IDG K+GK L D M + LKPD + S L+ GL +
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
+A++FF + RM + PN FN++M G C+ ++ + + M KP+ ++T+L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 495 IRGIASQGSLSSAILLFFQMLKRGL 519
I G+A +G A+ L ++ +GL
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 158/325 (48%), Gaps = 13/325 (4%)
Query: 106 DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLV 158
D + D GC Y+ L+ + G++DE+++ M G P+++ ++ +
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC--QPNVITHNIILRSMC 320
Query: 159 DSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIV 214
+ KL M KGF + L+N L RKG++ A + ++ Q G PN +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 215 TCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
+ N +L C ++ A + ++ G P++VT++T++ A CK+ K+E A ++ N +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
P LI Y+ +IDGL KAG+ + +LL + LK D + +SS++ G V
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
A++ + G PN ++++ ++ GLC+ + A ++ R +P+ +Y+ L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGL 419
I+G G ++ L + + +GL
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLF 454
++G+L +GF +NM+ G PD + C+ LI G A + +P++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
+N ++ G C+ + + + M ++ PDV+T+ ++R + G L A+ + +M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
L+R PDVITY+ +I + + + + M G PD+ YNVL+N + KE L
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
D A+K + G +P++IT+N I+ CS
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 149/570 (26%), Positives = 277/570 (48%), Gaps = 18/570 (3%)
Query: 53 QFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFG----KTYNFFRLFRDSL 108
F + H +S ++ +IH+L++S A +M+ + G + N +
Sbjct: 105 HFPNFKHTSLS---LSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNC 161
Query: 109 GDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSV----G 164
G + LI YV+ K+ E+ E F + G +S D L+ LV V G
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221
Query: 165 QYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLC 224
Y ++ R+ G ++N L + G +E QV ++G P+IVT N ++
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 225 INGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLI 284
G + A L + + G P V T++T+IN CK K E+A +++ M+ L PD
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
Y L+ K G + E ++ R + D+V FSS+M + G++ +A+ ++ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
G +P+ + Y+ILI+G C++G + A L ++L + ++TY++++ G CK L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTL 459
+ L++ M +R L PD+ ++LI+G + +A+ F + + ++ +NTL
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
+DG ++ +++ M I P I++++L+ + S+G L+ A ++ +M+ + +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALK 579
P V+ +++I G + N S G + M G PD YN L+ ++E N+ A
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 580 LFGQLTDR--GLEPDIITYNTIICGYCSLN 607
L ++ + GL PD+ TYN+I+ G+C N
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 239/480 (49%), Gaps = 15/480 (3%)
Query: 126 GKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC---- 179
GK+++ + + + G+Y PD+V L+S + + ++L AM GKGF
Sbjct: 249 GKMEKVGTFLSQVQEKGVY--PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
Y ++NGL + G E A + ++++ G P+ T +L C G + +F +
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
P++V FS++++ F + L+KA +N + E L+PD +IY+ILI G + G +
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
L L +G +DVV +++++ +G A + ++ M P+ + +IL
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
I G C+ G L A LF ++ +R+ ++TY++L+DGF K G + ++ +M+ + +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
P + S+L+N L + +A R + + + + P + I N+++ G CR A+D
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKR--GLTPDVITYSAIIHG 532
M PD I++ LI G + ++S A L +M + GL PDV TY++I+HG
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
+ + + + M GV PD + Y ++N + + NL A ++ ++ RG PD
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 219/421 (52%), Gaps = 15/421 (3%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
Y+ +I + GK + + E+FA M G LSPD + L+ V + K+
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSG--LSPDSTTYRSLLMEACKKGDVVETEKVFSD 365
Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
MR + + +M+ R G ++ A V + G +P+ V +++ C G
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
I A +L + +L G +VVT++T+++ CK L +A +L+N M E L PD +I
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
LIDG K G L+ EL ++ ++LDVV +++++D + +GD+ A + + M++
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
LP ISYSIL+ LC +G L EA ++ +++ + ++P+++ +S+I G+C+SG DG
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLMGD-------ALRFFFQSVRMTLIPNLFIFNTLMD 461
S + MI G PD + + LI G + + L + + L+P++F +N+++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
G CR + + + M + PD T+T +I G SQ +L+ A + +ML+RG +P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Query: 522 D 522
D
Sbjct: 726 D 726
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/559 (26%), Positives = 269/559 (48%), Gaps = 21/559 (3%)
Query: 67 IAQLIHVLLQSDMRDVASHVFDKMVIQ--------FGKTYNFFRLFRDSLGDFGCDYSFL 118
+ + ++V + D D VF I F + + + RD G YSF
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR-GITPDVYSFT 150
Query: 119 I--ENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
I +++ + + ++ + MS G ++ ++ + N + Y+L M
Sbjct: 151 IRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS 210
Query: 177 G--FCVYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
G C+ F L+ L +KG ++ + +VI+RG +PN+ T N ++ LC G++ A
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
+ L+ GPKP+V+T++ LI CK +K ++A M+ L PD Y+ LI G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 293 LFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPN 352
K G ++ ++ A+ G D + S++D G+ RA+ ++ L G PN
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 353 VISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
VI Y+ LIKGL QG ++EA L ++ + L P + T++ L++G CK G + D L
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 413 NMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
MI +G PD ++LI+G M +AL + + P+++ +N+L++G C+
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
+ D ++ + M P++ T +L+ + L A+ L +M + + PD +T+
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 528 AIIHGLFKGKNISVGLHMFKLMERN-GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
+I G K ++ +F+ ME V+ YN++++ ++ N+ A KLF ++ D
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Query: 587 RGLEPDIITYNTIICGYCS 605
R L PD TY ++ G+C
Sbjct: 631 RCLGPDGYTYRLMVDGFCK 649
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 224/431 (51%), Gaps = 5/431 (1%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
VY M RKG ++ A ++ ++ P + + N I+ L +G A ++ +
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
G P+V +F+ + +FCK ++ A +L N M +++ Y ++ G ++
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
EG EL L G+ L + F+ ++ GDV + D+++ G LPN+ +Y++
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
I+GLCQ+G L A + G ++ + +P ++TY++LI G CK+ K ++ M+ GL
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 420 KPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
+PD+ + LI G++ A R +V +P+ F + +L+DG C +
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
LF IKP+VI + LI+G+++QG + A L +M ++GL P+V T++ +++GL
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
K +S + K+M G PDI +N+L++ + ++ AL++ + D G++PD+
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 595 TYNTIICGYCS 605
TYN+++ G C
Sbjct: 498 TYNSLLNGLCK 508
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 194/420 (46%), Gaps = 10/420 (2%)
Query: 200 MHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS-LFDVLLLVGPKPNVVTFSTLINAF 258
M ++V GF + T ++++L G+ L D+ VG + + +
Sbjct: 30 MRKEV---GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNY 86
Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
++ K+++A ++ M D P + Y+ ++ L +G + +++ + DRG+ DV
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
F+ M ++ A++ + M + G NV++Y ++ G ++ E LFG+
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----- 433
+L + L T++ L+ CK G +++ L D +IKRG+ P+ +L I GL
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
+ A+R + P++ +N L+ G C+ + + M ++PD T+
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
LI G G + A + + G PD TY ++I GL + L +F G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDG 613
+ P++ +YN L+ L + + A +L +++++GL P++ T+N ++ G C + C+ D
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM-GCVSDA 445
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 218/422 (51%), Gaps = 24/422 (5%)
Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNA---------------SSLFDVLLLVGPKPN 247
++ + GF P++VT N +L LC+ +I A +LFD ++ +G P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
V+TF+TLIN C E ++ +A L N M+ L D++ Y +++G+ K G K LL
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
+ +K DVV++S+++D G A + ML G PNV +Y+ +I G C G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
R +A L ++ R + P +LT+++LI K GKL + L D M+ R + PD V +
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 428 LLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
+I G DA F + P++ FNT++D CR KR + ++L +
Sbjct: 406 SMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
+ + T+ LI G +L++A LF +M+ G+ PD IT + +++G + + +
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
L +F++++ + + D YN++++ + K +D A LF L G+EPD+ TYN +I G
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 603 YC 604
+C
Sbjct: 582 FC 583
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 199/400 (49%), Gaps = 29/400 (7%)
Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
V CNK++ + A SL+ + + N+ +F+ LI FC KL + +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
+ ++ PD++ ++ L+ GL R+ E L ++ G
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL------------------ 208
Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
AV +D+M+ G P VI+++ LI GLC +GR++EA L +++ + L ++TY +
Sbjct: 209 --EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMT 448
+++G CK G + +L M + +KPD V+ S +I+ G DA F + +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
+ PN+F +N ++DG C R +D +L M I PDV+T LI +G L A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
L +ML R + PD +TY+++I+G K HMF LM +PD+ +N ++++
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442
Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
+ +D ++L +++ RGL + TYNT+I G+C +++
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/574 (24%), Positives = 267/574 (46%), Gaps = 48/574 (8%)
Query: 51 AIQFFKW---THNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDS 107
AI FF + + ++ + ++I V ++ + DVA ++ KM I+ R
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-----------RIP 138
Query: 108 LGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQ 165
L + ++ LI+ + K+ S+ F ++ +G PD+V L+ L + + +
Sbjct: 139 LNIYS--FNILIKCFCDCHKLSFSLSTFGKLTKLG--FQPDVVTFNTLLHGLCLEDRISE 194
Query: 166 YYKLCRAMRGKGF-------------------CVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
L M GF + L+NGL +G + A + +++
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254
Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
+G ++VT I+ +C G +A +L + KP+VV +S +I+ CK+
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
A L++ M+E + P++ Y+ +IDG GR + LL ++R + DV+ F++++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
A V G + A + D ML+ P+ ++Y+ +I G C+ R +A +F + P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SP 430
Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
++T++++ID +C++ ++ +G L + +RGL + + LI+G + A F
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
+ + + P+ N L+ G C ++ + ++LF ++ M I D + + ++I G+
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
+ A LF + G+ PDV TY+ +I G IS +F M+ NG PD + Y
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
N L+ +K +D +++L ++ G D T
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 210/471 (44%), Gaps = 65/471 (13%)
Query: 127 KIDESVEIFAYMSDMG-------------IYLSPDLV--QRLMSCLVDSNSVGQYYKLCR 171
+I E++ +F YM + G I L+P ++ L++ L V + L
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 172 AMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
M GKG + Y ++NG+ + G ++A ++ ++ + P++V + I+ RLC +G
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
+A LF +L G PNV T++ +I+ FC + A +L M+E ++ PD++ ++
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
LI K G+L E +L L R + D V ++S++ + A +D M +
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS- 429
Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
P+V++++ +I C+ R+ E L ++ R L + TY++LI GFC+ L
Sbjct: 430 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLI------------ 450
L+ MI G+ PD + C++L+ G + +AL F + ++M+ I
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIH 545
Query: 451 ------------------------PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
P++ +N ++ G C +D LF M +P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
D T+ LIRG G + +I L +M G + D T + + G+
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGR 656
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 16/328 (4%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
Y+ +I+ + G+ ++ + M + I +PD++ L+S V + + KLC
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREI--NPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 173 MRGK----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M + Y ++ G + ++A HM + P++VT N I+ C +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKR 447
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+ L + G N T++TLI+ FC+ L A L+ M+ + PD I +I
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
L+ G + +L+E EL + LD V ++ ++ V A + + G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
P+V +Y+++I G C + + +A LF ++ EP TY++LI G K+G++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 409 SLYDNMIKRGLKPDA----VVCSLLING 432
L M G DA +V L+ +G
Sbjct: 628 ELISEMRSNGFSGDAFTIKMVADLITDG 655
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 230/416 (55%), Gaps = 8/416 (1%)
Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
+E + ++IQ +P+IV +K+L ++ + SLF + + G ++ +++
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 254 LINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG 313
+IN C+ ++ A + MM+ PD++ S LI+G + R+ + +L+ + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 314 LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEAC 373
+ DVV++++++D IG V AV+ +DRM G + ++Y+ L+ GLC GR +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL 433
L +++R + P+++T++++ID F K GK + LY+ M +R + PD + LINGL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 434 -----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDV 488
+ +A + V +P++ +NTL++G C+ KR + KLF M + D
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 489 ITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKL 548
IT+ +I+G G +A +F +M R P++ TYS +++GL + L +F+
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 549 MERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
M+++ + DI YN++++ + K N++ A LF L+ +GL+PD+++Y T+I G+C
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 202/386 (52%), Gaps = 6/386 (1%)
Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
G Y ++N L R A + ++++ G+ P++VT + ++ C ++ +A
Sbjct: 101 GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 160
Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
L + +G +P+VV ++T+I+ CK + A +L++ M + D + Y+ L+ GL
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
+GR + L+ + R + +V+ F++V+D +V G A++ Y+ M P+V
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
+Y+ LI GLC GR+ EA + ++ + P ++TY++LI+GFCKS ++ +G L+ M
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 415 IKRGLKPDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
+RGL D + + +I G DA + F RM PN+ ++ L+ G C R
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS--RMDSRPNIRTYSILLYGLCMNWRVE 398
Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
+ LF M I+ D+ T+ ++I G+ G++ A LF + +GL PDV++Y+ +I
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 531 HGLFKGKNISVGLHMFKLMERNGVAP 556
G + + +++ M+ +G+ P
Sbjct: 459 SGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 158/319 (49%), Gaps = 34/319 (10%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ +I+ +IG ++++VE+F M G+ D V
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGV--RADAV------------------------ 210
Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
Y L+ GL G +A + R ++ R VPN++T ++ G+ A
Sbjct: 211 -----TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
L++ + P+V T+++LIN C ++++A Q+ +LM+ +PD++ Y+ LI+G
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
K+ R+ EG +L RGL D + +++++ Y G A + + RM + PN+
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIR 382
Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
+YSIL+ GLC R+ +A LF + +E + TY+ +I G CK G + D + L+ ++
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 415 IKRGLKPDAVVCSLLINGL 433
+GLKPD V + +I+G
Sbjct: 443 SCKGLKPDVVSYTTMISGF 461
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%)
Query: 500 SQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIA 559
S +L I LF +M++ P ++ +S ++ + K KN + + +F ME G+ D+
Sbjct: 46 SSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLY 105
Query: 560 IYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
YN+++N L + AL + G++ G EPD++T +++I G+C N
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGN 153
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
+ + LF M P ++ + ++ IA + I LF M G+ D+ +Y+ +I
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111
Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
+ L + + L + M + G PD+ + L+N + + A+ L ++ + G
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
Query: 591 PDIITYNTIICGYCSL 606
PD++ YNTII G C +
Sbjct: 172 PDVVIYNTIIDGSCKI 187
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 235/455 (51%), Gaps = 9/455 (1%)
Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCR 171
G DY ++ N +R K+D+S+++F +M S RL+S + L
Sbjct: 46 GSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWE 105
Query: 172 AMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
M+ G C L+N R + A ++I+ G P+IVT +L C
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD 165
Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
++ +A +FD ++ +G KPNVV ++T+I+ CK +++ A L N M + + PD++ Y+
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
LI GL +GR + ++ R + DV F++++DA V G V A + Y+ M+
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
P++++YS+LI GLC RL EA +FG ++ + P ++TYS LI+G+CKS K+ G
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
L+ M +RG+ + V ++LI G + A F + V + PN+ +N L+ G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
C + + + M + D++T+ ++IRG+ G ++ A ++ + +GL PD
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
+ TY+ ++ GL+K +F+ M+ +G+ P+
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 197/382 (51%), Gaps = 5/382 (1%)
Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
++ ++ LF ++ P P++ FS L++A K K + L+ M + + +L +
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
IL++ + +L L + G + +V F S+++ + V A+ +D+M+
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
G+ PNV+ Y+ +I GLC+ ++ A L ++ + P ++TY+SLI G C SG+ D
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 408 FSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
+ M KR + PD + LI+ G + +A F+ + +R +L P++ ++ L+ G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
C R + ++F M PDV+T+++LI G + + LF +M +RG+ +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
+TY+ +I G + ++V +F+ M GV P+I YNVLL+ L ++ AL +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 583 QLTDRGLEPDIITYNTIICGYC 604
+ G++ DI+TYN II G C
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMC 442
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
I GFC S + S Y M++ G++ + D+L FF V+ +P++
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMK----------LDDSLDLFFHMVQCRPLPSIA 82
Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
F+ L+ ++K+ + L+ M M I ++ T +L+ LS A+ +M
Sbjct: 83 DFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM 142
Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
+K G P ++T+ ++++G +G + L+MF M G P++ IYN +++ L K +
Sbjct: 143 IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202
Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
D AL L ++ G+ PD++TYN++I G CS
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 31/253 (12%)
Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
+ + R SL YS LI ++DE+ E+F +M G + PD+V
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF--PDVV--------- 327
Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
Y L+NG + +E+ + ++ QRG V N VT +
Sbjct: 328 --------------------TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
++ C G++ A +F ++ G PN++T++ L++ C K+EKA + M + +
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
D++ Y+I+I G+ KAG + + ++ + +GL D+ ++++M G A
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADA 487
Query: 340 TYDRMLNGGFLPN 352
+ +M G LPN
Sbjct: 488 LFRKMKEDGILPN 500
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 214/410 (52%), Gaps = 32/410 (7%)
Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
AF + +++RGF N+ N +LK LC N + G A SL + P+V +++T+I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
FC+ +LEKA +L N M L+ + ILID KAG++ E L GL+
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
D+VV++S++ + G++ R +D +L G P I+Y+ LI+G C+ G+L EA +F
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
++ R + P++ TY+ LIDG C GK ++ L + MI++ +P+AV +++IN L D
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
Query: 437 ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIR 496
L D V++ LM +PD IT+ +L+
Sbjct: 366 GL------------------------------VADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 497 GIASQGSLSSAILLFFQMLKRG--LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
G+ ++G L A L + MLK PDVI+Y+A+IHGL K + L ++ L+
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
A D N+LLN +K +++ A++L+ Q++D + + TY +I G+C
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/594 (24%), Positives = 287/594 (48%), Gaps = 35/594 (5%)
Query: 28 SDLQFNQANAILANLIKTNNPTPAIQFFK---WTHNCVSSPNIAQLIHVLLQSDMRDVAS 84
S L F N ++A L+++ N A F++ T ++ +++ L+ +Q A
Sbjct: 69 SSLAF-AGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAF 127
Query: 85 HVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIY 144
V ++++ G +N + +++ L++ R + ++V + M
Sbjct: 128 GVL-ALMLKRGFAFNVY------------NHNILLKGLCRNLECGKAVSLLREMRRNS-- 172
Query: 145 LSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLL-----RKGVIENA 197
L PD+ ++ + + + +L M+G G C + + G+L + G ++ A
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG-CSWSLVTWGILIDAFCKAGKMDEA 231
Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
+++ G ++V +++ C G++ +LFD +L G P +T++TLI
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
FCK +L++A +++ M+E + P++ Y+ LIDGL G+ KE +LL +++ + +
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
V ++ +++ G V AV+ + M P+ I+Y+IL+ GLC +G L EA L
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 378 QVLIRR--LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN---- 431
+L +P +++Y++LI G CK +L +YD ++++ D V ++L+N
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLK 471
Query: 432 -GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
G + A+ + Q ++ N + ++DG C+ L M + ++P V
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
+ L+ + +GSL A LF +M + PDV++++ +I G K +I + M
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
R G++PD+ Y+ L+N +K LD A+ F ++ D G EPD ++++ YC
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-KYC 644
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 125/260 (48%), Gaps = 6/260 (2%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQY---YKL 169
Y+ L+ G +DE+ ++ M Y PD++ L+ L N + Q Y L
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 170 CRAMRGKGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
G G V L+N L+ G + A + +Q+ V N T ++ C G
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+ A L + + +P+V ++ L+++ CKE L++A++L+ M + PD++ ++I
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
+IDG KAG +K LL+ GL D+ +S +++ ++ +G + A+ +D+M++ G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Query: 349 FLPNVISYSILIKGLCQQGR 368
F P+ ++K QG
Sbjct: 630 FEPDAHICDSVLKYCISQGE 649
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 239/471 (50%), Gaps = 45/471 (9%)
Query: 176 KGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
+ FC Y E L NGL E A + +++ +P+I+ K+L + + +
Sbjct: 35 RAFCNYREILRNGLHSLQFNE-ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVIN 93
Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
L D L ++G ++ T + L+N FC+ ++ A MM++ PD++ ++ LI+G
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
R++E ++ ++ G+K DVV++++++D+ G V A+ +D+M N G P+V+
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
Y+ L+ GLC GR +A L + R+++P ++T+++LID F K GK D LY+ M
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 415 IKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
I+ + P+ + LING + +A + F+ P++ + +L++G C+ K+
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
D +K+F M + + IT+T LI+G G + A +F M+ RG+ P++ TY+ +
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 530 IHGLFKGKNISVGLHMFKLMER---NGVAPDIAIYNVLLNMLIKECNLDAAL-------- 578
+H L + L +F+ M++ +GVAP+I YNVLL+ L L+ AL
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 579 ---------------------------KLFGQLTDRGLEPDIITYNTIICG 602
LF L +G++P+++TY T+I G
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 256/508 (50%), Gaps = 13/508 (2%)
Query: 95 GKTYNFFRLFRDSLGDFG-CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRL 153
GK +F RL S C+Y ++ N + + +E++++F +M + S +L
Sbjct: 19 GKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKL 78
Query: 154 MSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGF 209
++ + LC ++ G LMN + A ++++ GF
Sbjct: 79 LNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF 138
Query: 210 VPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQ 269
P+IVT ++ C+ ++ A S+ + ++ +G KP+VV ++T+I++ CK + A
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 270 LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYV 329
L++ M + PD+++Y+ L++GL +GR ++ + LL R +K DV+ F++++DA+V
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 330 GIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLL 389
G A + Y+ M+ PN+ +Y+ LI G C +G + EA +F + + P ++
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 390 TYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQS 444
Y+SLI+GFCK K+ D ++ M ++GL + + + LI G +G A F
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 445 VRMTLIPNLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
V + PN+ +N L+ C ++K+A + M + P++ T+ VL+ G+
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
G L A+++F M KR + +ITY+ II G+ K + +++F + GV P++ Y
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGL 589
+++ L +E A LF ++ + G+
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 200/385 (51%), Gaps = 8/385 (2%)
Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
Q A LF ++ P P+++ F+ L+N K K + L + + M + DL +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
+L++ ++ + + L + G + D+V F+S+++ + + A+ ++M+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
G P+V+ Y+ +I LC+ G + A LF Q+ + P ++ Y+SL++G C SG+ RD
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDG 462
SL M KR +KPD + + LI+ + DA + + +RM++ PN+F + +L++G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
C + ++F LM PDV+ +T LI G + A+ +F++M ++GLT +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
ITY+ +I G + +V +F M GV P+I YNVLL+ L + AL +F
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 583 QLTDR---GLEPDIITYNTIICGYC 604
+ R G+ P+I TYN ++ G C
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLC 436
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 212/454 (46%), Gaps = 47/454 (10%)
Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
D++ L+ ++ K D + + ++ MG+ LM+C S+ M
Sbjct: 74 DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133
Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
GF + L+NG +E A M Q+++ G P++V I+ LC NG +
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193
Query: 230 GNASSLFDVL------------------------------LLVGP-----KPNVVTFSTL 254
A SLFD + LL G KP+V+TF+ L
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
I+AF KE K A +LYN M+ M + P++ Y+ LI+G G + E ++ +G
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
DVV ++S+++ + V A++ + M G N I+Y+ LI+G Q G+ A
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR---GLKPDAVVCSLLIN 431
+F ++ R + P++ TY+ L+ C +GK++ ++++M KR G+ P+ ++L++
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
GL + AL F + + + + ++ G C+ + + V LF + +KP
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
+V+T+T +I G+ +G A +LF +M + G++
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 98/185 (52%), Gaps = 8/185 (4%)
Query: 427 SLLINGL----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
+L NGL +AL F V +P++ F L++ ++K+ + L + +
Sbjct: 42 EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 483 NIKPDVITHTVLIRGI--ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNIS 540
+ D+ T +L+ +SQ L+S+ L +M+K G PD++T++++I+G G +
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFL--GKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 541 VGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
+ M M G+ PD+ +Y +++ L K +++ AL LF Q+ + G+ PD++ Y +++
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 601 CGYCS 605
G C+
Sbjct: 220 NGLCN 224
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 224/428 (52%), Gaps = 5/428 (1%)
Query: 181 YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLL 240
Y L++GL G +E AF + Q+ ++G P+ T ++K LC G I A +LFD ++
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
G KPNV T++ LI+ C++ K+E+A + M++ + P +I Y+ LI+G K GR+
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388
Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
ELL R K +V F+ +M+ +G +AV RML+ G P+++SY++LI
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
GLC++G + A L + +EP LT++++I+ FCK GK + M+++G+
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
D V + LI+G+ DAL V+M ++ N ++D + + + + +
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
+ + P V+T+T L+ G+ G ++ + + M G P+V Y+ II+GL +
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628
Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
+ + M+ +GV+P+ Y V++ + LD AL+ + +RG E +
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI 688
Query: 596 YNTIICGY 603
Y++++ G+
Sbjct: 689 YSSLLQGF 696
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 219/426 (51%), Gaps = 8/426 (1%)
Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
A+ +R++ GFV ++ I+ LC NG A +L +G + ++L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 257 AFCKEAKLEKAFQLYNLM-MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
FC+ L A +++++M E+ P+ + YSILI GL + GRL+E L ++G +
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
++ ++ A G + +A +D M+ G PNV +Y++LI GLC+ G++ EA G+
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
+++ R+ PS++TY++LI+G+CK G++ F L M KR KP+ + L+ GL
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 434 MGDALRFFFQSVRM---TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
+G + RM L P++ +N L+DG CR KL M ++I+PD +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
T +I QG A ML++G++ D +T + +I G+ K L + + +
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCL 610
+ + NV+L+ML K C + L + G++ GL P ++TY T++ G + S
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL--IRSGD 596
Query: 611 IDGYFK 616
I G F+
Sbjct: 597 ITGSFR 602
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 155/632 (24%), Positives = 273/632 (43%), Gaps = 77/632 (12%)
Query: 21 SESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKW----THNCVSSPNIAQLIHVLLQ 76
S K+ +S + N A+ +++ L +++N ++FF W + C QL+ +++
Sbjct: 58 SSLKSLVSHMNPNVASQVIS-LQRSDNDI-CVRFFMWVCKHSSYCFDPTQKNQLLKLIVS 115
Query: 77 SDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFA 136
S + VA V ++ + + C+ L Y DE E+F
Sbjct: 116 SGLYRVAHAVIVALIKECSR----------------CEKEMLKLMYC----FDELREVFG 155
Query: 137 YMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFLMNGLLRKG 192
+ + Y S L+ L + Y R M GF V Y ++N L + G
Sbjct: 156 FRLNYPCYSS------LLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNG 209
Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL-LLVGPKPNVVTF 251
E A ++++ GFV + +L C + +A +FDV+ V PN V++
Sbjct: 210 YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSY 269
Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
S LI+ C+ +LE+AF L + M E P Y++LI L G + + L +
Sbjct: 270 SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP 329
Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
RG K +V ++ ++D G + A +M+ P+VI+Y+ LI G C+ GR+V
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389
Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
A L + R +P++ T++ L++G C+ GK L M+ GL PD V ++LI+
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 432 GL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP 486
GL M A + + P+ F +++ C+ +A LM I
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 487 DVITHTVLIRGIASQGSLSSAILLFFQMLKR----------------------------- 517
D +T T LI G+ G A+ + ++K
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569
Query: 518 ------GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKE 571
GL P V+TY+ ++ GL + +I+ + +LM+ +G P++ Y +++N L +
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 572 CNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
++ A KL + D G+ P+ +TY ++ GY
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 187/381 (49%), Gaps = 13/381 (3%)
Query: 236 FDVLLLV-GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD---LVPDLIIYSILID 291
FD L V G + N +S+L+ + AKL+ F Y M+ V +I Y +++
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSL---AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVN 203
Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG-GFL 350
L K G + + L G LD + +S++ + ++ A++ +D M
Sbjct: 204 ALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCA 263
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
PN +SYSILI GLC+ GRL EA GL Q+ + +PS TY+ LI C G + F+L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
+D MI RG KP+ ++LI+GL D A + V+ + P++ +N L++G C+
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
R +L +M KP+V T L+ G+ G A+ L +ML GL+PD+++
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
Y+ +I GL + +++ + M + PD + ++N K+ D A G +
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 586 DRGLEPDIITYNTIICGYCSL 606
+G+ D +T T+I G C +
Sbjct: 504 RKGISLDEVTGTTLIDGVCKV 524
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/531 (23%), Positives = 220/531 (41%), Gaps = 81/531 (15%)
Query: 96 KTYNFFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV 150
K +N F D + GC Y+ LI+ R GKI+E+ + M I+ S
Sbjct: 319 KAFNLF----DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVI 205
L++ V ++L M + C + LM GL R G A H+ ++++
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
G P+IV+ N ++ LC G + A L + +P+ +TF+ +INAFCK+ K +
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN------------------ELLL 307
A LM+ + D + + LIDG+ K G+ ++ ++L
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 308 TALDRGLKL-----------------DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
L +G K+ VV +++++D + GD+ + + + M G L
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
PNV Y+I+I GLCQ GR+ EA L + + P+ +TY+ ++ G+ +GKL
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGD---------------ALRFFFQSVRMTLIPNLFI 455
M++RG + + + S L+ G + ALR LI +
Sbjct: 674 VRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQ 733
Query: 456 FNTLMDGCC-----------RLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSL 504
+ G C R + D V+ + G++ K +++ S+
Sbjct: 734 LGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK----AMDIIMESYCSKKKH 789
Query: 505 SSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHM-FKLMERNGV 554
+ + L +LK G P ++ +I GL K + + +L+ NGV
Sbjct: 790 TKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGV 840
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 251/523 (47%), Gaps = 22/523 (4%)
Query: 98 YNFFRLFRDSLGDFGCD--------YSFLIENYVRIGKIDESVEIFAYMSDMGIYLS-PD 148
Y F D LG+ + S ++ Y G + ++VEI+ Y+ ++ Y S PD
Sbjct: 112 YRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVEL--YDSVPD 169
Query: 149 LV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEF----LMNGLLRKGVIENAFHMHR 202
++ L+S LV S +G K+ M +G V + L+ G+ +G +E +
Sbjct: 170 VIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIE 229
Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
+G +PNIV N I+ C G I NA +F L L G P + TF T+IN FCKE
Sbjct: 230 GRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEG 289
Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
+ +L + + E L + + +ID ++ G + E + + K DV ++
Sbjct: 290 DFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYN 349
Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
+++ G AV D G +PN +SY+ LI+ C+ A L Q+ R
Sbjct: 350 ILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER 409
Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DA 437
+P ++TY LI G SG + D ++ +I RG+ PDA + ++L++GL A
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469
Query: 438 LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG 497
F + + ++P+ +++ TL+DG R + K+F L +K DV+ H +I+G
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529
Query: 498 IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPD 557
G L A+ +M + L PD TYS II G K ++++ + +F+ ME+N P+
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
+ Y L+N + + A + F ++ R L P+++TY T+I
Sbjct: 590 VVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 237/517 (45%), Gaps = 30/517 (5%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ +I Y ++G I+ + +F + G + + +++ +L ++
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 175 GKGFCVYEFLMNGLL----RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
+G V + +N ++ R G + +I P++ T N ++ RLC G+
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A D G PN ++++ LI A+CK + + A +L M E PD++ Y ILI
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
GL +G + + + + +DRG+ D +++ +M G A + ML+ L
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
P+ Y+ LI G + G EA +F + + ++ ++ ++++I GFC+SG L + +
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG-CC 464
+ M + L PD S +I+G M A++ F + PN+ + +L++G CC
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602
Query: 465 R--LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS-LSSAILLFFQMLKRGLTP 521
+ K A +T F M + ++ P+V+T+T LIR +A + S L A+ + M+ P
Sbjct: 603 QGDFKMAEET---FKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVP 659
Query: 522 DVITYSAIIHGLFK-----------GKN---ISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
+ +T++ ++ G K G N S+ F M+ +G + A YN L
Sbjct: 660 NEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVC 719
Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
L + A ++ +G PD +++ I+ G+C
Sbjct: 720 LCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 138/312 (44%), Gaps = 27/312 (8%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ LI+ ++R G DE+ ++F+ + G+ + ++ S + + M
Sbjct: 488 YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547
Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
+ Y +++G +++ + A + R + + PN+VT ++ C G
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK-LEKAFQLYNLMMEMDLVPDLIIYSIL 289
A F + L PNVVT++TLI + KE+ LEKA + LMM VP+ + ++ L
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667
Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
+ G K K +L D +FS + + RM + G+
Sbjct: 668 LQGFVKKTSGK-----VLAEPDGSNHGQSSLFS----------------EFFHRMKSDGW 706
Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
+ +Y+ + LC G + AC +++ + P +++++++ GFC G + +
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRN 766
Query: 410 L-YDNMIKRGLK 420
+ + N+ ++GL+
Sbjct: 767 MDFCNLGEKGLE 778
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 44/318 (13%)
Query: 331 IGDVGRAVQTYDRMLN---GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
I DV V+ +D + + F N + S +K L + E + G + ++ +
Sbjct: 74 IQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLT 133
Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIK-RGLKPDAVVCSLLINGL-----MGDALRFF 441
S ++ + +SG L +YD +++ PD + C+ L++ L +GDA + +
Sbjct: 134 HEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVY 193
Query: 442 FQ--------------------------SVRMTL---------IPNLFIFNTLMDGCCRL 466
+ V L IPN+ +NT++ G C+L
Sbjct: 194 DEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253
Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
+ +F + + P + T +I G +G ++ L ++ +RGL V
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
+ II ++ + N PD+A YN+L+N L KE + A+ + +
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 587 RGLEPDIITYNTIICGYC 604
+GL P+ ++Y +I YC
Sbjct: 374 KGLIPNNLSYAPLIQAYC 391
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 227/434 (52%), Gaps = 5/434 (1%)
Query: 176 KGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL 235
+ F Y ++ L +A + +++ +P+I+ ++L + + SL
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105
Query: 236 FDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFK 295
F+ + ++G P + T + +++ C ++ +A MM++ PDL+ ++ L++G
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH 165
Query: 296 AGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVIS 355
R+++ L L G K +VV +++++ + AV+ +++M G PNV++
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225
Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
Y+ L+ GLC+ GR +A L ++ RR+EP+++T+++LID F K GKL + LY+ MI
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 416 KRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
+ + PD LIN GL+ +A + F+ R PN I+ TL+ G C+ KR
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
D +K+F M + + IT+TVLI+G G A +F QM R PD+ TY+ ++
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
GL + L +F+ M + + +I Y +++ + K ++ A LF L +G++
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 591 PDIITYNTIICGYC 604
P++ITY T+I G+C
Sbjct: 466 PNVITYTTMISGFC 479
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 202/394 (51%), Gaps = 5/394 (1%)
Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
KIL+ N Q +A LF ++ P P+++ F+ L++ K + + L+ M +
Sbjct: 53 KILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
+ P L +I++ + + + + L + G + D+V F+S+++ Y + A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
+ +D++L GF PNV++Y+ LI+ LC+ L A LF Q+ P+++TY++L+ G
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPN 452
C+ G+ D L +M+KR ++P+ + + LI+ G + +A + ++M++ P+
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
+F + +L++G C + ++F LM P+ + +T LI G + + +F+
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 513 QMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKEC 572
+M ++G+ + ITY+ +I G V +F M PDI YNVLL+ L
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 573 NLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
++ AL +F + R ++ +I+TY II G C L
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 188/392 (47%), Gaps = 36/392 (9%)
Query: 141 MGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVI 194
M + PDLV L++ N + L + G GF Y L+ L + +
Sbjct: 145 MKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHL 204
Query: 195 ENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTL 254
+A + Q+ G PN+VT N ++ LC G+ G+A+ L ++ +PNV+TF+ L
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGL 314
I+AF K KL +A +LYN+M++M + PD+ Y LI+GL G L E ++ G
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
+ V++++++ + V ++ + M G + N I+Y++LI+G C GR A
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
+F Q+ RR P + TY+ L+DG C +GK+ +++ M KR + + V +++I G+
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM- 443
Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
C+L + D LF + +KP+VIT+T +
Sbjct: 444 -----------------------------CKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
I G +G + A LF +M + G P+ Y
Sbjct: 475 ISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 176/352 (50%), Gaps = 43/352 (12%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
++ L+ Y +I++++ +F + MG P++V L+ CL + + +L
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMG--FKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M G Y L+ GL G +A + R +++R PN++T ++ G+
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+ A L++V++ + P+V T+ +LIN C L++A Q++ LM P+ +IY+
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY--VGIGDVGRAV-------- 338
LI G K+ R+++G ++ +G+ + + ++ ++ Y VG DV + V
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 339 -----QTYDRMLNG----GFLP----------------NVISYSILIKGLCQQGRLVEAC 373
+TY+ +L+G G + N+++Y+I+I+G+C+ G++ +A
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Query: 374 GLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVV 425
LF + + ++P+++TY+++I GFC+ G + + SL+ M + G P+ V
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 132/249 (53%), Gaps = 10/249 (4%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD------LVQRL-MSCLVDSNSVGQYY 167
++ LI+ +V++GK+ E+ E++ M M +Y PD L+ L M L+D + +Y
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVY--PDVFTYGSLINGLCMYGLLDE-ARQMFY 317
Query: 168 KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
+ R +Y L++G + +E+ + ++ Q+G V N +T +++ C+ G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
+ A +F+ + P++ T++ L++ C K+EKA ++ M + ++ +++ Y+
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
I+I G+ K G++++ +L + +G+K +V+ +++++ + G + A + +M
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 348 GFLPNVISY 356
GFLPN Y
Sbjct: 498 GFLPNESVY 506
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 223/426 (52%), Gaps = 5/426 (1%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
+ L+ GL +G + A + ++++ G P++VT N I+ +C +G A L +
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
K +V T+ST+I++ C++ ++ A L+ M + ++ Y+ L+ GL KAG+
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
+G LL + R + +V+ F+ ++D +V G + A + Y M+ G PN+I+Y+ L
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
+ G C Q RL EA + ++ + P ++T++SLI G+C ++ DG ++ N+ KRGL
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 420 KPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
+AV S+L+ G A F + V ++P++ + L+DG C + ++
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
+F + + ++ +T +I G+ G + A LF + +G+ P+V+TY+ +I GL
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDII 594
K ++S + + ME +G AP+ YN L+ +++ +L A+ KL ++ G D
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
Query: 595 TYNTII 600
+ +I
Sbjct: 580 SIKMVI 585
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 215/397 (54%), Gaps = 9/397 (2%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
Y ++NG+ R G A + R++ +R ++ T + I+ LC +G I A SLF +
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
G K +VVT+++L+ CK K L M+ ++VP++I +++L+D K G+L
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
+E NEL + RG+ +++ ++++MD Y + A D M+ P++++++ L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
IKG C R+ + +F + R L + +TYS L+ GFC+SGK++ L+ M+ G+
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 420 KPDAVVCSLLINGL-----MGDALRFF--FQSVRMTLIPNLFIFNTLMDGCCRLKRATDT 472
PD + +L++GL + AL F Q +M L + ++ T+++G C+ + D
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL--GIVMYTTIIEGMCKGGKVEDA 492
Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
LF + +KP+V+T+TV+I G+ +GSLS A +L +M + G P+ TY+ +I
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLI 569
+ +++ + + M+ G + D + ++++ML+
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 239/466 (51%), Gaps = 8/466 (1%)
Query: 151 QRLMSCLVD---SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
+RL S +VD +++ + ++ R+ + + + R +Q+
Sbjct: 58 ERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117
Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
G NI T N ++ C + A S+ ++ +G +P+ TF+TLI E K+ +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
L + M+E PD++ Y+ +++G+ ++G +LL +R +K DV +S+++D+
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
G + A+ + M G +V++Y+ L++GLC+ G+ + L ++ R + P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
++T++ L+D F K GKL++ LY MI RG+ P+ + + L++G + +A
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
VR P++ F +L+ G C +KR D +K+F + + + +T+++L++G G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
+ A LF +M+ G+ PDV+TY ++ GL + L +F+ ++++ + I +Y
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
++ + K ++ A LF L +G++P+++TY +I G C S
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 216/409 (52%), Gaps = 5/409 (1%)
Query: 197 AFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLIN 256
A+ + +V++ G+ P+ T N ++K L + G++ A L D ++ G +P+VVT+++++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 257 AFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL 316
C+ A L M E ++ D+ YS +ID L + G + L +G+K
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 317 DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLF 376
VV ++S++ G M++ +PNVI++++L+ ++G+L EA L+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 377 GQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--- 433
+++ R + P+++TY++L+DG+C +L + ++ D M++ PD V + LI G
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 434 --MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITH 491
+ D ++ F + L+ N ++ L+ G C+ + +LF M + + PDV+T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 492 TVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMER 551
+L+ G+ G L A+ +F + K + ++ Y+ II G+ KG + ++F +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 552 NGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTII 600
GV P++ Y V+++ L K+ +L A L ++ + G P+ TYNT+I
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/543 (23%), Positives = 256/543 (47%), Gaps = 24/543 (4%)
Query: 16 NKCYCSESKTHISDLQFNQANAILANLIKTNNPTPA-IQFFKWTHNCVSSPNIAQLIHVL 74
N C+ ++ I D++ + A A+ +I++ P P+ + F ++ + ++
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSR-PLPSLVDFSRFFSAIARTKQFNLVLDFC 111
Query: 75 LQSDMRDVASHVF--DKMVIQFGK------TYNFF-RLFRDSLGDFGCDYSFLIENYVRI 125
Q ++ +A +++ + M+ F + Y+ ++ + ++ LI+
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 126 GKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC---- 179
GK+ E+V + M + G PD+V +++ + S L R M +
Sbjct: 172 GKVSEAVVLVDRMVENGC--QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
Y +++ L R G I+ A + +++ +G ++VT N +++ LC G+ + + L +
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
+ PNV+TF+ L++ F KE KL++A +LY M+ + P++I Y+ L+DG RL
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
E N +L + D+V F+S++ Y + V ++ + + G + N ++YSIL
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGL 419
++G CQ G++ A LF +++ + P ++TY L+DG C +GKL +++++ K +
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 420 KPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVK 474
V+ + +I G+ + DA F + PN+ + ++ G C+ ++
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 475 LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLF 534
L M P+ T+ LIR G L+++ L +M G + D + +I L
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Query: 535 KGK 537
G+
Sbjct: 590 SGE 592
>sp|Q9LER0|PP381_ARATH Pentatricopeptide repeat-containing protein At5g14770,
mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2
SV=2
Length = 940
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/536 (26%), Positives = 248/536 (46%), Gaps = 45/536 (8%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
+S +I + GK+ E + M +M +Y + L+ L +N L M
Sbjct: 264 FSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV 323
Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
+G VY LM+GL + G + A + +++ VPN+VT ++ LC G +
Sbjct: 324 VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLS 383
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
+A + +L PNVVT+S++IN + K+ LE+A L M + ++VP+ Y +I
Sbjct: 384 SAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVI 443
Query: 291 DGLFKAG-----------------------------------RLKEGNELLLTALDRGLK 315
DGLFKAG R+KE L+ + +G+
Sbjct: 444 DGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 503
Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
LD + ++S++D + GD A+ + M G +V+SY++LI G+ + G+ V A
Sbjct: 504 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWA 562
Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI----- 430
+ + + +EP + T++ +++ K G L+D M G+KP + C++++
Sbjct: 563 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 622
Query: 431 NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVIT 490
NG M +A+ Q + M + PNL + +D + KRA K + Y IK
Sbjct: 623 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 682
Query: 491 HTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLME 550
+ LI + G A ++ M RG PD +T+++++HG F G ++ L + +M
Sbjct: 683 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 742
Query: 551 RNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
G++P++A YN ++ L + K ++ RG+ PD TYN +I G +
Sbjct: 743 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 798
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 232/495 (46%), Gaps = 42/495 (8%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS-NSVGQYYK---LC 170
Y+ +I G DE+ + + M MGI PD V + L+D VG + + L
Sbjct: 166 YNTVISGLCEHGLADEAYQFLSEMVKMGIL--PDTVS--YNTLIDGFCKVGNFVRAKALV 221
Query: 171 RAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
+ + L++ IE A+ R ++ GF P++VT + I+ RLC G++
Sbjct: 222 DEISELNLITHTILLSSYYNLHAIEEAY---RDMVMSGFDPDVVTFSSIINRLCKGGKVL 278
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
L + + PN VT++TL+++ K A LY+ M+ + DL++Y++L+
Sbjct: 279 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLM 338
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
DGLFKAG L+E + L+ +VV +++++D GD+ A +ML +
Sbjct: 339 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 398
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
PNV++YS +I G ++G L EA L ++ + + P+ TY ++IDG K+GK L
Sbjct: 399 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 458
Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
M G++ N +I + L++ R+ R
Sbjct: 459 SKEMRLIGVE------------------------------ENNYILDALVNHLKRIGRIK 488
Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
+ L M + D I +T LI G +A+ +M +RG+ DV++Y+ +I
Sbjct: 489 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 548
Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
G+ K + +K M G+ PDIA +N+++N K+ + + LKL+ ++ G++
Sbjct: 549 SGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK 607
Query: 591 PDIITYNTIICGYCS 605
P +++ N ++ C
Sbjct: 608 PSLMSCNIVVGMLCE 622
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 223/432 (51%), Gaps = 31/432 (7%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVL 239
+++F +NGL+ V ++ ++I G P++ N ++ C G++ A SL
Sbjct: 102 IHQFNVNGLVHDQV----SLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNR 157
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
++ + VT++T+I+ C+ ++A+Q + M++M ++PD + Y+ LIDG K G
Sbjct: 158 VI---SIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNF 214
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
L +D +L+++ + ++ +Y + + A Y M+ GF P+V+++S +
Sbjct: 215 VRAKAL----VDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSI 267
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLE-----PSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
I LC+ G+++E G +L+R +E P+ +TY++L+D K+ R +LY M
Sbjct: 268 INRLCKGGKVLE-----GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 322
Query: 415 IKRGLKPDAVVCSLLINGLM--GDALRFFFQSVRMTL----IPNLFIFNTLMDGCCRLKR 468
+ RG+ D VV ++L++GL GD LR ++ +M L +PN+ + L+DG C+
Sbjct: 323 VVRGIPVDLVVYTVLMDGLFKAGD-LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 381
Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
+ + M ++ P+V+T++ +I G +G L A+ L +M + + P+ TY
Sbjct: 382 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 441
Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
+I GLFK + + + K M GV + I + L+N L + + L + +G
Sbjct: 442 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 501
Query: 589 LEPDIITYNTII 600
+ D I Y ++I
Sbjct: 502 VTLDQINYTSLI 513
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 232/501 (46%), Gaps = 45/501 (8%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
YS +I YV+ G ++E+V + M D + P+
Sbjct: 404 YSSMINGYVKKGMLEEAVSLLRKMEDQNVV--PN-------------------------- 435
Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
GF Y +++GL + G E A + +++ G N + ++ L G+I
Sbjct: 436 --GF-TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 492
Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
L ++ G + + +++LI+ F K E A M E + D++ Y++LI G+
Sbjct: 493 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML 552
Query: 295 KAGRLKEGNELLLTAL-DRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
K G++ G + + ++G++ D+ F+ +M++ GD ++ +D+M + G P++
Sbjct: 553 KFGKV--GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSL 610
Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
+S +I++ LC+ G++ EA + Q+++ + P+L TY +D K + F ++
Sbjct: 611 MSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHET 670
Query: 414 MIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDG---CCR 465
++ G+K V + LI G+ A IP+ FN+LM G
Sbjct: 671 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 730
Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
+++A T + M G I P+V T+ +IRG++ G + +M RG+ PD T
Sbjct: 731 VRKALSTYSVMMEAG---ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFT 787
Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
Y+A+I G K N+ + ++ M +G+ P + YNVL++ + A +L ++
Sbjct: 788 YNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMG 847
Query: 586 DRGLEPDIITYNTIICGYCSL 606
RG+ P+ TY T+I G C L
Sbjct: 848 KRGVSPNTSTYCTMISGLCKL 868
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 237/530 (44%), Gaps = 18/530 (3%)
Query: 87 FDKMVIQFGKTYNFFRL--FRDSLGDFG-CDYSFLIENYVRIGKIDESVEIFAYMSDMGI 143
++ ++ F K NF R D + + ++ L+ +Y + I+E AY +
Sbjct: 201 YNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEE-----AYRDMVMS 255
Query: 144 YLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG----KGFCVYEFLMNGLLRKGVIENA 197
PD+V +++ L V + L R M Y L++ L + + +A
Sbjct: 256 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 315
Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
++ Q++ RG ++V ++ L G + A F +LL PNVVT++ L++
Sbjct: 316 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 375
Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
CK L A + M+E ++P+++ YS +I+G K G L+E LL D+ + +
Sbjct: 376 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 435
Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
+ +V+D G A++ M G N L+ L + GR+ E GL
Sbjct: 436 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 495
Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--- 434
++ + + + Y+SLID F K G + + M +RG+ D V ++LI+G++
Sbjct: 496 DMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG 555
Query: 435 GDALRFFFQSVRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
+ ++ +R I P++ FN +M+ + + +KL+ M IKP +++ +
Sbjct: 556 KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNI 615
Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNG 553
++ + G + AI + QM+ + P++ TY + K K + + G
Sbjct: 616 VVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG 675
Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
+ +YN L+ L K A + G + RG PD +T+N+++ GY
Sbjct: 676 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 725
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 169/362 (46%), Gaps = 10/362 (2%)
Query: 114 DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
+Y+ LI+ + + G + ++ M + G+ L+S ++ VG + + M
Sbjct: 508 NYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY-KGM 566
Query: 174 RGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
R KG + +MN ++G E + ++ G P++++CN ++ LC NG++
Sbjct: 567 REKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKM 626
Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
A + + ++L+ PN+ T+ ++ K + + F+ + ++ + +Y+ L
Sbjct: 627 EEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 686
Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
I L K G K+ ++ RG D V F+S+M Y V +A+ TY M+ G
Sbjct: 687 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 746
Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
PNV +Y+ +I+GL G + E ++ R + P TY++LI G K G ++ +
Sbjct: 747 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 806
Query: 410 LYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCC 464
+Y MI GL P ++LI+ G M A + + + PN + T++ G C
Sbjct: 807 IYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 866
Query: 465 RL 466
+L
Sbjct: 867 KL 868
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 165/366 (45%), Gaps = 16/366 (4%)
Query: 247 NVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP-DLIIYSILIDGLFK----AGRLKE 301
N +FS++ E++ E + + + DL P +Y L LF+ RL
Sbjct: 20 NCRSFSSIKRPQIPESE-ETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYG 78
Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ-TYDRMLNGGFLPNVISYSILI 360
L G+ D +++S++ + G V V Y +M+ G P+V + ++LI
Sbjct: 79 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 138
Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
C+ GRL A L R + +TY+++I G C+ G + + M+K G+
Sbjct: 139 HSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 195
Query: 421 PDAVVCSLLINGL--MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
PD V + LI+G +G+ +R ++ + NL L+ L + + ++
Sbjct: 196 PDTVSYNTLIDGFCKVGNFVRAKALVDEISEL-NLITHTILLSSYYNLHAIEEAYRDMVM 254
Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
G PDV+T + +I + G + LL +M + + P+ +TY+ ++ LFK
Sbjct: 255 SG---FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 311
Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
L ++ M G+ D+ +Y VL++ L K +L A K F L + P+++TY
Sbjct: 312 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 371
Query: 599 IICGYC 604
++ G C
Sbjct: 372 LVDGLC 377
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 415 IKRGLKPDAVVCSLLINGLMGDA-LRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
IKR P++ SL I D L V ++L LF L C RL A T+
Sbjct: 27 IKRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSLFHTLF---RLYLSCERLYGAARTL 83
Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI-LLFFQMLKRGLTPDVITYSAIIHG 532
M + + PD LI G + + L++ +M+ G++PDV + +IH
Sbjct: 84 SA---MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHS 140
Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPD 592
K +S + L+ ++ D YN +++ L + D A + ++ G+ PD
Sbjct: 141 FCKVGRLSFAI---SLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPD 197
Query: 593 IITYNTIICGYCSL 606
++YNT+I G+C +
Sbjct: 198 TVSYNTLIDGFCKV 211
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 225/419 (53%), Gaps = 26/419 (6%)
Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
LM LL++ + ++++++I+R PN+ T N ++ LC G++ A + + + + G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 244 PKPNVVTFSTLINAFCK---EAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
PNVV+++TLI+ +CK K+ KA + M+E D+ P+L ++ILIDG +K L
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
++ LD+ +K +V+ ++S+++ G + A+ D+M++ G PN+I+Y+ LI
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
G C+ L EA +FG V + P+ Y+ LID +CK GK+ DGF+L + M + G+
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 421 PDAVVCSLLINGLMG----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
PD + LI GL +A + F + +P+L F+ LM+G CR + L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK-RGLTPDVITYSAIIHGLF- 534
M +KP +T+ ++++G +G+L +A + QM K R L +V +Y+ ++ G
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 535 KGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
KGK + + +++E+ G+ P+ Y + +KE ++ D+G PDI
Sbjct: 554 KGKLEDANMLLNEMLEK-GLVPNRITYEI-----VKE-----------EMVDQGFVPDI 595
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 203/422 (48%), Gaps = 19/422 (4%)
Query: 196 NAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSL-FDVLLLVGPKPNVVTFSTL 254
N + RQ+I P++ C + L N I + L F +L + +
Sbjct: 66 NPNELFRQLISSELDPDL--CLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSF 123
Query: 255 INAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-- 312
++ F + Q++++ + + ++ + SI+ D L A EL A R
Sbjct: 124 LDGFVRNGS---DHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSG 180
Query: 313 --GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLV 370
G KL + +M A + Y M+ PNV +++++I LC+ G++
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240
Query: 371 EACGLFGQVLIRRLEPSLLTYSSLIDGFCK---SGKLRDGFSLYDNMIKRGLKPDAVVCS 427
+A + + + P++++Y++LIDG+CK +GK+ ++ M++ + P+ +
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300
Query: 428 LLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
+LI+G D +++ F + + + PN+ +N+L++G C + ++ + + M
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
++P++IT+ LI G L A+ +F + +G P Y+ +I K I G
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
+ + MER G+ PD+ YN L+ L + N++AA KLF QLT +GL PD++T++ ++ G
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEG 479
Query: 603 YC 604
YC
Sbjct: 480 YC 481
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 185/365 (50%), Gaps = 24/365 (6%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIY-LSPDLVQRLMSCLVDS----NSVGQYYKL 169
++ +I + GK++++ ++ M DM +Y SP++V + L+D G+ YK
Sbjct: 226 FNVVINALCKTGKMNKARDV---MEDMKVYGCSPNVVS--YNTLIDGYCKLGGNGKMYKA 280
Query: 170 CRAMR-------GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
++ + L++G + + + + ++++ + PN+++ N ++
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
LC G+I A S+ D ++ G +PN++T++ LIN FCK L++A ++ + VP
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
+Y++LID K G++ +G L G+ DV ++ ++ G++ A + +D
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
++ + G LP+++++ IL++G C++G +A L ++ L+P LTY+ ++ G+CK G
Sbjct: 461 QLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 403 KLRDGFSLYDNMIK-RGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
L+ ++ M K R L+ + ++L+ G + DA + + L+PN +
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Query: 457 NTLMD 461
+ +
Sbjct: 580 EIVKE 584
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 131/270 (48%), Gaps = 34/270 (12%)
Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
G+ + +S L+ L ++ R + ++ +++ R+++P++ T++ +I+ CK+GK+
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
+ ++M G CS PN+ +NTL+DG C+L
Sbjct: 243 RDVMEDMKVYG-------CS-----------------------PNVVSYNTLIDGYCKLG 272
Query: 468 RATDTVK---LFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVI 524
K + M ++ P++ T +LI G +L ++ +F +ML + + P+VI
Sbjct: 273 GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 525 TYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL 584
+Y+++I+GL G IS + M M GV P++ YN L+N K L AL +FG +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 585 TDRGLEPDIITYNTIICGYCSLNSCLIDGY 614
+G P YN +I YC L + DG+
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGK-IDDGF 421
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 241/484 (49%), Gaps = 10/484 (2%)
Query: 127 KIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYE 182
K+D+++ +F M + S +L+S + N L M+ G Y
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 183 FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
+N R+ + A + ++++ G+ P+IVT N +L C +I A +L D ++ +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
G +P+ VTF+TL++ + K +A L M+ PDL+ Y +I+GL K G
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
LL ++ DVV++++++D + A +++M G P+V +Y+ LI
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIK-RGLKP 421
LC GR +A L +L + + P L+ +++LID F K GKL + LYD M+K + P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
D V + LI G + + + F + + L+ N + TL+ G + + + +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
M + PD++T+ +L+ G+ + G++ +A+++F M KR + D++TY+ +I L K
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
+ G +F + GV P++ Y +++ ++ + A LF ++ + G P+ TY
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 597 NTII 600
NT+I
Sbjct: 535 NTLI 538
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 241/463 (52%), Gaps = 6/463 (1%)
Query: 148 DLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQR 207
+L ++++ L +++G + + ++ + L++ + + + + Q+
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
G N+ T + + C Q+ A ++ ++ +G P++VT ++L+N FC ++ +A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
L + M+EM PD + ++ L+ GLF+ + E L+ + +G + D+V + +V++
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
G+ A+ ++M G +V+ Y+ +I GLC+ + +A LF ++ + ++P
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFF 442
+ TY+ LI C G+ D L +M+++ + PD V + LI+ G + +A + +
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 443 QSVRMT-LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
+ V+ P++ +NTL+ G C+ KR + +++F M + + +T+T LI G
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
+A ++F QM+ G+ PD++TY+ ++ GL N+ L +F+ M++ + DI Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
++ L K ++ LF L+ +G++P+++TY T++ G+C
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 224/439 (51%), Gaps = 7/439 (1%)
Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
E L +L+ +++A + +++ P+IV +K+L + + SL + +
Sbjct: 44 ENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN 103
Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
+G N+ T+S IN FC+ ++L A + MM++ P ++ + L++G R+ E
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
L+ ++ G + D V F++++ AV +RM+ G P++++Y +I
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
GLC++G A L ++ ++E ++ Y+++IDG CK + D F L++ M +G+KP
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 422 DAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
D + LI+ G DA R + + P+L FN L+D + + + KL+
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 477 -MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
++ + PDV+ + LI+G + + +F +M +RGL + +TY+ +IHG F+
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
++ +FK M +GV PDI YN+LL+ L N++ AL +F + R ++ DI+T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 596 YNTIICGYCSLNSCLIDGY 614
Y T+I C + DG+
Sbjct: 464 YTTMIEALCKAGK-VEDGW 481
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/565 (23%), Positives = 270/565 (47%), Gaps = 36/565 (6%)
Query: 14 SINKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHV 73
S + C + S+ + DL+ + A + +++K+ P P+I F + ++ N L+ +
Sbjct: 38 SSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSR-PFPSIVEFSKLLSAIAKMNKFDLV-I 95
Query: 74 LLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVE 133
L M+++ G ++N + YS I + R ++ ++
Sbjct: 96 SLGEQMQNL------------GISHNLYT------------YSIFINYFCRRSQLSLALA 131
Query: 134 IFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLL 189
I M +G S + L++ N + + L M G+ + L++GL
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 190 RKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVV 249
+ A + +++ +G P++VT ++ LC G+ A +L + + + +VV
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 250 TFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
++T+I+ CK ++ AF L+N M + PD+ Y+ LI L GR + + LL
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF-LPNVISYSILIKGLCQQGR 368
L++ + D+V F++++DA+V G + A + YD M+ P+V++Y+ LIKG C+ R
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 369 LVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSL 428
+ E +F ++ R L + +TY++LI GF ++ + ++ M+ G+ PD + ++
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 429 LINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYN 483
L++GL + AL F + + ++ + T+++ C+ + D LF + +
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 484 IKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGL 543
+KP+V+T+T ++ G +G A LF +M + G P+ TY+ +I + + +
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 544 HMFKLMERNGVAPDIAIYNVLLNML 568
+ K M G A D + + ++ NML
Sbjct: 552 ELIKEMRSCGFAGDASTFGLVTNML 576
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 138/287 (48%), Gaps = 12/287 (4%)
Query: 93 QFGKTYNFFRLFRDSL-GDFGCDYSF---LIENYVRIGKIDESVEIFAYMSDMGIYLSPD 148
+G+ + RL D L + D F LI+ +V+ GK+ E+ +++ M + PD
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK-SKHCFPD 355
Query: 149 LV--QRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHR 202
+V L+ V + ++ R M +G Y L++G + +NA + +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
Q++ G P+I+T N +L LC NG + A +F+ + K ++VT++T+I A CK
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
K+E + L+ + + P+++ Y+ ++ G + G +E + L + + G + ++
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
+++ A + GD + + M + GF + ++ L+ + GRL
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRL 581
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 206 bits (523), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 226/429 (52%), Gaps = 5/429 (1%)
Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
E L LR + +A + +++ P+IV N++L + + SL + +
Sbjct: 54 ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113
Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
+G + ++ TF+ +IN FC ++ A + M+++ PD + L++G + R+ +
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 302 GNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIK 361
L+ ++ G K D+V +++++D+ V A + + G PNV++Y+ L+
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 362 GLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
GLC R +A L ++ +++ P+++TYS+L+D F K+GK+ + L++ M++ + P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
D V S LINGL + +A + F V + ++ +NTL++G C+ KR D +KLF
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
M + + +T+ LI+G G + A F QM G++PD+ TY+ ++ GL
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
+ L +F+ M++ + DI Y ++ + K ++ A LF L+ +GL+PDI+TY
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 597 NTIICGYCS 605
T++ G C+
Sbjct: 474 TTMMSGLCT 482
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 198/387 (51%), Gaps = 5/387 (1%)
Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
G ++ T N ++ C Q+ A S+ +L +G +P+ VT +L+N FC+ ++ A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
L + M+E+ PD++ Y+ +ID L K R+ + + +G++ +VV ++++++
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 328 YVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
A + M+ PNVI+YS L+ + G+++EA LF +++ ++P
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFF 442
++TYSSLI+G C ++ + ++D M+ +G D V + LING + D ++ F
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
+ + L+ N +NTL+ G + + F M + I PD+ T+ +L+ G+ G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
L A+++F M KR + D++TY+ +I G+ K + +F + G+ PDI Y
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGL 589
+++ L + L L+ ++ GL
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 196/380 (51%), Gaps = 13/380 (3%)
Query: 184 LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVG 243
L+NG R+ + +A + ++++ G+ P+IV N I+ LC ++ +A F + G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 244 PKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
+PNVVT++ L+N C ++ A +L + M++ + P++I YS L+D K G++ E
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
EL + + D+V +SS+++ + A Q +D M++ G L +V+SY+ LI G
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
C+ R+ + LF ++ R L + +TY++LI GF ++G + + M G+ PD
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 424 VVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
++L+ NG + AL F + + ++ + T++ G C+ + + LF
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
+ + +KPD++T+T ++ G+ ++G L L+ +M + GL + T S +
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGD 512
Query: 539 ISVGLHMFKLMERNGVAPDI 558
I++ + K M G AP +
Sbjct: 513 ITLSAELIKKMLSCGYAPSL 532
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 181/322 (56%), Gaps = 8/322 (2%)
Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRAMRG 175
L+ + R ++ ++V + M ++G PD+V ++ L + V + + +
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIG--YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218
Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
KG Y L+NGL +A + +I++ PN++T + +L NG++
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
A LF+ ++ + P++VT+S+LIN C ++++A Q+++LM+ + D++ Y+ LI+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
G KA R+++G +L RGL + V +++++ + GDV +A + + +M G P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
++ +Y+IL+ GLC G L +A +F + R ++ ++TY+++I G CK+GK+ + +SL+
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 412 DNMIKRGLKPDAVVCSLLINGL 433
++ +GLKPD V + +++GL
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGL 480
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 166/309 (53%), Gaps = 4/309 (1%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ +I++ + +++++ + F + GI + L++ L +S+ +L M
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
K Y L++ ++ G + A + ++++ P+IVT + ++ LC++ +I
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A+ +FD+++ G +VV+++TLIN FCK ++E +L+ M + LV + + Y+ LI
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
G F+AG + + E G+ D+ ++ ++ G++ +A+ ++ M
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
++++Y+ +I+G+C+ G++ EA LF + ++ L+P ++TY++++ G C G L + +L
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 411 YDNMIKRGL 419
Y M + GL
Sbjct: 493 YTKMKQEGL 501
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 167/376 (44%), Gaps = 34/376 (9%)
Query: 36 NAILANLIKTNNPTPAIQFFKWTHNCVSSPNI---AQLIHVLLQSDMRDVASHVFDKMVI 92
NAI+ +L KT A FFK PN+ L++ L S A+ + M I
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-I 252
Query: 93 QFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV-- 150
+ T N YS L++ +V+ GK+ E+ E+F M M I PD+V
Sbjct: 253 KKKITPNVIT------------YSALLDAFVKNGKVLEAKELFEEMVRMSI--DPDIVTY 298
Query: 151 QRLMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQ 206
L++ L + + + ++ M KG Y L+NG + +E+ + R++ Q
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
RG V N VT N +++ G + A F + G P++ T++ L+ C +LEK
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
A ++ M + ++ D++ Y+ +I G+ K G+++E L + +GLK D+V ++++M
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
G + Y +M G + N + S G + + L ++L P
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAP 530
Query: 387 SLLTYSSLIDGFCKSG 402
SLL + G CK
Sbjct: 531 SLL--KDIKSGVCKKA 544
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%)
Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
L+ AI LF M+K P ++ ++ ++ + K K V + + K ME G+ D+ +N+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
++N + AL + G++ G EPD +T +++ G+C N
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 245/505 (48%), Gaps = 13/505 (2%)
Query: 112 GCDYSFLIENYVRIGKIDESVEIFAYMSD----MGIYLSPDLVQRLMSCLVDSNSVGQYY 167
GC Y+ L+ + R G +DE +++ M + IY +V L + QY
Sbjct: 184 GC-YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK-LGNVEEANQYV 241
Query: 168 -KLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
K+ A F Y L+ G ++ +++AF + ++ +G N V ++ LC+
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
+I A LF + P V T++ LI + C + +A L M E + P++ Y
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
++LID L + ++ ELL L++GL +V+ ++++++ Y G + AV + M +
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
PN +Y+ LIKG C+ + +A G+ ++L R++ P ++TY+SLIDG C+SG
Sbjct: 422 RKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMD 461
+ L M RGL PD + +I+ L + +A F + + PN+ ++ L+D
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
G C+ + + + M N P+ +T LI G+ + G L A LL +M+K GL P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
V T + +IH L K + F+ M +G PD Y + +E L A +
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 582 GQLTDRGLEPDIITYNTIICGYCSL 606
++ + G+ PD+ TY+++I GY L
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDL 685
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 217/514 (42%), Gaps = 62/514 (12%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN---SVGQYYKLCR 171
Y+ LI Y + G I+++V++ M + + L+ SN ++G K+
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLE 455
Query: 172 AMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
Y L++G R G ++A+ + + RG VP+ T ++ LC + ++
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
A LFD L G PNVV ++ LI+ +CK K+++A + M+ + +P+ + ++ LI
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
GL G+LKE L + GL+ V + ++ + GD A + +ML+ G P
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
+ +Y+ I+ C++GRL++A + ++ + P L TYSSLI G+ G+ F +
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 412 DNMIKRGLKPDAVVCSLLINGL-----------------MGDALRF------FFQSVRMT 448
M G +P LI L M + + F + V +
Sbjct: 696 KRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHS 755
Query: 449 LIPNL------------------------------------FIFNTLMDGCCRLKRATDT 472
+ PN +FN L+ CC+LK+ +
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815
Query: 473 VKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHG 532
K+ M P + + VLI G+ +G +F +L+ G D + + II G
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDG 875
Query: 533 LFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
+ K + +F +ME+NG Y++L+
Sbjct: 876 VGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 157/295 (53%), Gaps = 6/295 (2%)
Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
KL + +++++++ G V Q Y ML PN+ +Y+ ++ G C+ G + EA
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ 239
Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL- 433
+++ L+P TY+SLI G+C+ L F +++ M +G + + V + LI+GL
Sbjct: 240 YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Query: 434 ----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
+ +A+ F + P + + L+ C +R ++ + L M IKP++
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
T+TVLI + SQ A L QML++GL P+VITY+A+I+G K I + + +LM
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
E ++P+ YN L+ K N+ A+ + ++ +R + PD++TYN++I G C
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 5/257 (1%)
Query: 356 YSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
Y+ L+ L + G + E ++ ++L ++ P++ TY+ +++G+CK G + + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
+ GL PD + LI G + A + F + N + L+ G C +R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
+ + LF+ M P V T+TVLI+ + S A+ L +M + G+ P++ TY+ +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
L + M G+ P++ YN L+N K ++ A+ + + R L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 591 PDIITYNTIICGYCSLN 607
P+ TYN +I GYC N
Sbjct: 426 PNTRTYNELIKGYCKSN 442
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 20/252 (7%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD---SNSVGQYYKLCR 171
YS LI+ Y +G+ + + ++ M D G S L+ L++ G +LC
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC- 733
Query: 172 AMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
AM + EF + + ++++ PN + K++ +C G +
Sbjct: 734 AMSN----MMEF-----------DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 232 ASSLFDVLLL-VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A +FD + G P+ + F+ L++ CK K +A ++ + M+ + +P L +LI
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
GL+K G + G + L G D + + ++D G V + ++ M G
Sbjct: 839 CGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
Query: 351 PNVISYSILIKG 362
+ +YS+LI+G
Sbjct: 899 FSSQTYSLLIEG 910
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 558 IAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
I YN LLN L + +D +++ ++ + + P+I TYN ++ GYC L + + S
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 618 QI 619
+I
Sbjct: 243 KI 244
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 236/485 (48%), Gaps = 43/485 (8%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y +I +YV+ ++ S+ F M D G + L++ +V S+S Q++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 175 GKGFC-VYEF--LMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
K VY F L+ G G IE +F + ++ + GF
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGF---------------------- 194
Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
PNVV ++TLI+ CK+ ++EKA L+ M ++ LV + Y++LI+
Sbjct: 195 -------------SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
GLFK G K+G E+ + G+ ++ ++ VM+ G A Q +D M G
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
N+++Y+ LI GLC++ +L EA + Q+ + P+L+TY++LIDGFC GKL SL
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 412 DNMIKRGLKPDAVVCSLLINGL--MGD---ALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
++ RGL P V ++L++G GD A + + + P+ + L+D R
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
++L + M + PDV T++VLI G +G ++ A LF M+++ P+ + Y
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
+ +I G K + L + K ME +AP++A Y ++ +L KE A +L ++ D
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMID 541
Query: 587 RGLEP 591
G++P
Sbjct: 542 SGIDP 546
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 196/380 (51%), Gaps = 6/380 (1%)
Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
S F+ ++ G P F+ L+ + + + +N + +V D+ + ILI G
Sbjct: 115 SYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN-ENKSKVVLDVYSFGILIKGC 173
Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
+AG +++ +LL+ + G +VV++++++D G++ +A + M G + N
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE 233
Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
+Y++LI GL + G + ++ ++ + P+L TY+ +++ CK G+ +D F ++D
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
M +RG+ + V + LI GL + +A + Q + PNL +NTL+DG C + +
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
+ L + + P ++T+ +L+ G +G S A + +M +RG+ P +TY+
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
+I + N+ + + ME G+ PD+ Y+VL++ + ++ A +LF + ++
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 589 LEPDIITYNTIICGYCSLNS 608
EP+ + YNT+I GYC S
Sbjct: 474 CEPNEVIYNTMILGYCKEGS 493
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 185/386 (47%), Gaps = 7/386 (1%)
Query: 225 INGQIGNASSLFDVLLLV-GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDL 283
I+ Q +SSL L K + +IN++ + L + +N M++ VP
Sbjct: 70 IHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGS 129
Query: 284 IIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
++ L+ + + + + + LDV F ++ G++ ++
Sbjct: 130 NCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIE 188
Query: 344 MLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGK 403
+ GF PNV+ Y+ LI G C++G + +A LF ++ L + TY+ LI+G K+G
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 404 LRDGFSLYDNMIKRGLKPD-----AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNT 458
+ GF +Y+ M + G+ P+ V+ L +G DA + F + + N+ +NT
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRG 518
L+ G CR + + K+ M I P++IT+ LI G G L A+ L + RG
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 519 LTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
L+P ++TY+ ++ G + + S M K ME G+ P Y +L++ + N++ A+
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 579 KLFGQLTDRGLEPDIITYNTIICGYC 604
+L + + GL PD+ TY+ +I G+C
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFC 454
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 132/292 (45%), Gaps = 31/292 (10%)
Query: 315 KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACG 374
K ++ ++++YV + ++ ++ M++ GF+P ++ L+ + +
Sbjct: 91 KTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS 150
Query: 375 LFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM 434
F + ++ + ++ LI G C++G++ F L + + G P
Sbjct: 151 FFNENK-SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSP------------- 196
Query: 435 GDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
N+ I+ TL+DGCC+ LF MG + + T+TVL
Sbjct: 197 -----------------NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239
Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
I G+ G ++ +M + G+ P++ TY+ +++ L K +F M GV
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 555 APDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
+ +I YN L+ L +E L+ A K+ Q+ G+ P++ITYNT+I G+C +
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR--LMSCLVDSNSVGQYYKLCRA 172
Y+ LI+ + +GK+ +++ + + G LSP LV L+S K+ +
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRG--LSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M +G Y L++ R +E A + + + G VP++ T + ++ CI GQ
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+ AS LF ++ +PN V ++T+I +CKE +A +L M E +L P++ Y
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDA 327
+I+ L K + KE L+ +D G+ + S + A
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 245/537 (45%), Gaps = 49/537 (9%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
YS LI+ ++ D + + M GI + P + + + + + L M
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
G Y L+ G R+ + + + ++ +R V + T ++K +C +G +
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A ++ ++ G +PNVV ++TLI F + ++ A ++ M E + PD+ Y+ LI
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
GL KA R+ E L+ ++ GLK + + + + Y+ + A + M G L
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
PN + + LI C++G+++EAC + ++ + + TY+ L++G K+ K+ D +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
+ M +G+ PD +LING M A F + V L PN+ I+N L+ G CR
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
+L M + + P+ +T+ +I G G L+ A LF +M +GL PD
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 526 YSAIIHGLFKGKNISVGLHMF-----------------------------------KLM- 549
Y+ ++ G + ++ + +F +LM
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794
Query: 550 ---ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
+R G P+ YN++++ L KE NL+AA +LF Q+ + L P +ITY +++ GY
Sbjct: 795 GSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 139/544 (25%), Positives = 256/544 (47%), Gaps = 52/544 (9%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ LIE Y R + + E+ M I +SP ++ + S + Y + + M
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
G +Y L+ L+ +A + +++ ++G P+I N ++ L ++
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 231 NASSLFDVLLLVGPKPNVVTFST-----------------------------------LI 255
A S ++ G KPN T+ LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLK 315
N +CK+ K+ +A Y M++ ++ D Y++L++GLFK ++ + E+ +G+
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 316 LDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGL 375
DV + +++ + +G++ +A +D M+ G PNVI Y++L+ G C+ G + +A L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 376 FGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-- 433
++ ++ L P+ +TY ++IDG+CKSG L + F L+D M +GL PD+ V + L++G
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 434 MGDALRF--FFQSVRMTLIPNLFIFNTLMDGCCRL-KRATDTVKLFMLM-GMYNI--KPD 487
+ D R F + + + FN L++ + K T L LM G ++ KP+
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
+T+ ++I + +G+L +A LF QM L P VITY+++++G K + +F
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQL-----TDRGLEPDIITYNTIICG 602
G+ PD +Y+V++N +KE AL L Q+ D G + I T ++ G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 603 YCSL 606
+ +
Sbjct: 925 FAKV 928
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/542 (23%), Positives = 237/542 (43%), Gaps = 64/542 (11%)
Query: 110 DFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKL 169
D G + L + Y+ G I+E+V F + S MG+ L P RL C V +++ ++ +L
Sbjct: 149 DDGVLFGILFDGYIAKGYIEEAV--FVFSSSMGLELVP----RLSRCKVLLDALLRWNRL 202
Query: 170 CRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNI-------VTCNKILKR 222
++ + G++ + V+ + H +I N+ K +
Sbjct: 203 D---------LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRT 253
Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPD 282
+N + A L + ++ G P T+ LI+ CK +LE A L M + + D
Sbjct: 254 ATLN--VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311
Query: 283 LIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
YS+LIDGL K L+ + G+ + ++ + G + +A +D
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371
Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
M+ G +P +Y+ LI+G C++ + + L ++ R + S TY +++ G C SG
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431
Query: 403 KLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFN 457
L +++ MI G +P+ V+ + LI N GDA+R + + P++F +N
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 458 TLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRG-------------------- 497
+L+ G + KR + + M +KP+ T+ I G
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 498 ---------------IASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
+G + A + M+ +G+ D TY+ +++GLFK +
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
+F+ M G+APD+ Y VL+N K N+ A +F ++ + GL P++I YN ++ G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 603 YC 604
+C
Sbjct: 672 FC 673
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 212/438 (48%), Gaps = 15/438 (3%)
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRGF--VPNIVTCNKILKRLCI---NGQIGNASS 234
Y L++GLL+ + A + +++ G P + C +C+ G + A +
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC-----ICVMSKEGVMEKAKA 368
Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
LFD ++ G P +++LI +C+E + + ++L M + ++V Y ++ G+
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVI 354
+G L ++ + G + +VV++++++ ++ G A++ M G P++
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 355 SYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNM 414
Y+ LI GL + R+ EA +++ L+P+ TY + I G+ ++ + M
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 415 IKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRA 469
+ G+ P+ V+C+ LIN G + +A + V ++ + + LM+G + +
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 470 TDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAI 529
D ++F M I PDV ++ VLI G + G++ A +F +M++ GLTP+VI Y+ +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
+ G + I + M G+ P+ Y +++ K +L A +LF ++ +GL
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 590 EPDIITYNTIICGYCSLN 607
PD Y T++ G C LN
Sbjct: 729 VPDSFVYTTLVDGCCRLN 746
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 176/389 (45%), Gaps = 26/389 (6%)
Query: 241 LVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLK 300
VG + V F L + + + +E+A +++ M ++LVP L +L+D L + RL
Sbjct: 144 FVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD 203
Query: 301 EGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV--GR-------------------AVQ 339
++ ++R + DV + ++ A+ G+V G+ A++
Sbjct: 204 LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALK 263
Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
+ M+ G +P +Y +LI GLC+ RL +A L ++ + TYS LIDG
Sbjct: 264 LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323
Query: 400 KSGKLRDGFSLYDNMIKRG--LKP---DAVVCSLLINGLMGDALRFFFQSVRMTLIPNLF 454
K L M+ G +KP D +C + G+M A F + LIP
Sbjct: 324 KGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383
Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
+ +L++G CR K +L + M NI T+ +++G+ S G L A + +M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
+ G P+V+ Y+ +I + + + K M+ G+APDI YN L+ L K +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGY 603
D A ++ + GL+P+ TY I GY
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGY 532
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 156/396 (39%), Gaps = 82/396 (20%)
Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
LI Y + GK+ E+ + M D GI LM+ L ++ V ++ R MRGKG
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 178 FC---------------------------------------VYEFLMNGLLRKGVIENAF 198
+Y L+ G R G IE A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 199 HMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
+ ++ +G PN VT I+ C +G + A LFD + L G P+ ++TL++
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 259 CKEAKLEKAFQLY----------------------------------NLMMEMDL----V 280
C+ +E+A ++ N +M+
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
P+ + Y+I+ID L K G L+ EL + L V+ ++S+++ Y +G
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL-----EPSLLTYSSLI 395
+D + G P+ I YS++I ++G +A L Q+ + + S+ T +L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
GF K G++ + +NM++ PD+ LIN
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 141/338 (41%), Gaps = 61/338 (18%)
Query: 83 ASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMG 142
AS +FD+MV + G T N Y+ L+ + R G+I+++ E+ MS G
Sbjct: 646 ASSIFDEMV-EEGLTPNVII------------YNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 143 IYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAF 198
++ + ++ S + + ++L M+ KG VY L++G R +E A
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 199 ------------------------------HMHRQVIQRGF--------VPNIVTCNKIL 220
+ +V+ R PN VT N ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
LC G + A LF + P V+T+++L+N + K + + F +++ + +
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Query: 281 PDLIIYSILIDGLFKAGRLKEGNELL-----LTALDRGLKLDVVVFSSVMDAYVGIGDVG 335
PD I+YS++I+ K G + L+ A+D G KL + +++ + +G++
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932
Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLC-QQGRLVEA 372
A + + M+ ++P+ + LI C + VEA
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/586 (25%), Positives = 278/586 (47%), Gaps = 30/586 (5%)
Query: 46 NNPTPAIQFFKWT-------HNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ----- 93
+P A +FFKW+ H+ S +A H+L + M A+ V +MV+
Sbjct: 120 EDPKLAFKFFKWSMTRNGFKHSVESYCIVA---HILFCARMYYDANSVLKEMVLSKADCD 176
Query: 94 -FGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQR 152
F ++ + G F +S LI+ +G ++E+++ F+ M ++
Sbjct: 177 VFDVLWSTRNVCVPGFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSCNG 232
Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRG 208
L+ + + M G G Y +++ + ++G +E A + ++ RG
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 209 FVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAF 268
VP+ VT N ++ G++ + F+ + + +P+V+T++ LIN FCK KL
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 269 QLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAY 328
+ Y M L P+++ YS L+D K G +++ + + GL + ++S++DA
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 329 VGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSL 388
IG++ A + + ML G NV++Y+ LI GLC R+ EA LFG++ + P+L
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 389 LTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFFFQS 444
+Y++LI GF K+ + L + + RG+KPD ++ I GL +A +
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Query: 445 VRMTLI-PNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGS 503
++ I N I+ TLMD + T+ + L M +I+ V+T VLI G+
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592
Query: 504 LSSAILLFFQMLKR-GLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
+S A+ F ++ GL + ++A+I GL K + +F+ M + G+ PD Y
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
L++ K+ N+ AL L ++ + G++ D++ Y +++ G N
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 205/423 (48%), Gaps = 16/423 (3%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
Y+ +I+ + ++G++D++V F M DM PD++ L++C + + R
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCC--EPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 173 MRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M+G G Y L++ ++G+++ A + + + G VPN T ++ C G
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+ +A L + +L VG + NVVT++ LI+ C ++++A +L+ M ++P+L Y+
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
LI G KA + ELL RG+K D++++ + + + + A + M G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
N + Y+ L+ + G E L ++ +E +++T+ LIDG CK+ KL
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN-KLVSKA 596
Query: 409 SLYDNMIKR--GLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMD 461
Y N I GL+ +A + + +I+GL D A F Q V+ L+P+ + +LMD
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
G + + + L M +K D++ +T L+ G++ L A +M+ G+ P
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Query: 522 DVI 524
D +
Sbjct: 717 DEV 719
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 156/324 (48%), Gaps = 19/324 (5%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ LI+ +IG + ++ + M +G+ + L+ L D+ + + +L M
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
G Y L++G ++ ++ A + ++ RG P+++ + LC +I
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A + + + G K N + ++TL++A+ K + L + M E+D+ ++ + +LI
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584
Query: 291 DGLFKAGRLKEGNELLLTALDR--------GLKLDVVVFSSVMDAYVGIGDVGRAVQTYD 342
DGL K N+L+ A+D GL+ + +F++++D V A ++
Sbjct: 585 DGLCK-------NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637
Query: 343 RMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSG 402
+M+ G +P+ +Y+ L+ G +QG ++EA L ++ ++ LL Y+SL+ G
Sbjct: 638 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCN 697
Query: 403 KLRDGFSLYDNMIKRGLKPDAVVC 426
+L+ S + MI G+ PD V+C
Sbjct: 698 QLQKARSFLEEMIGEGIHPDEVLC 721
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 137/310 (44%), Gaps = 5/310 (1%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ LI+ ++ E+ E+F M G+ + L+ V + ++ + +L ++
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 175 GKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
G+G +Y + GL IE A + ++ + G N + ++ +G
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN-LMMEMDLVPDLIIYSIL 289
L D + + + VVTF LI+ CK + KA +N + + L + I++ +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619
Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
IDGL K +++ L + +GL D ++S+MD G+V A+ D+M G
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
++++Y+ L+ GL +L +A +++ + P + S++ + G + +
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Query: 410 LYDNMIKRGL 419
L ++K L
Sbjct: 740 LQSYLMKHQL 749
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/535 (24%), Positives = 254/535 (47%), Gaps = 18/535 (3%)
Query: 86 VFDKMVIQFGKTYNFFRLFR--DSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYM 138
++++++++ G++ +F + + + + C+ + LIE+Y + DE + + +M
Sbjct: 85 LYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWM 144
Query: 139 SD-MGIYLSPDLVQRLMSCLVDSNSVG----QYYKLCRAMRGKGFCVYEFLMNGLLRKGV 193
D G+ R+++ LVD NS+ + K+ + L+ L R
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 194 IENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFST 253
+ A M + G VP+ T +++ G + A + + ++ G + V+ +
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 254 LINAFCKEAKLEKAFQLYNLMMEMD-LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR 312
+++ FCKE ++E A M D PD ++ L++GL KAG +K E++ L
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 313 GLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEA 372
G DV ++SV+ +G+V AV+ D+M+ PN ++Y+ LI LC++ ++ EA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 373 CGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN- 431
L + + + P + T++SLI G C + R L++ M +G +PD ++LI+
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 432 ----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
G + +AL Q ++ +NTL+DG C+ + + ++F M ++ + +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
+T+ LI G+ + A L QM+ G PD TY++++ +G +I + +
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
M NG PDI Y L++ L K ++ A KL + +G+ YN +I G
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 212/424 (50%), Gaps = 32/424 (7%)
Query: 184 LMNGLLRKGVIENAFHMHRQVI-QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV 242
+++G ++G +E+A + +++ Q GF P+ T N ++ LC G + +A + DV+L
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
G P+V T++++I+ CK ++++A ++ + M+ D P+ + Y+ LI L K +++E
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
EL +G+ DV F+S++ + A++ ++ M + G P+ +Y++LI
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
LC +G+L EA + Q+ + S++TY++LIDGFCK+ K R+ ++D M G+ +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 423 AVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMY 482
+V +NTL+DG C+ +R D +L M M
Sbjct: 505 SVT------------------------------YNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 483 NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVG 542
KPD T+ L+ G + A + M G PD++TY +I GL K + V
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 543 LHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG-LEPDIITYNTIIC 601
+ + ++ G+ YN ++ L ++ A+ LF ++ ++ PD ++Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 602 GYCS 605
G C+
Sbjct: 655 GLCN 658
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 236/503 (46%), Gaps = 83/503 (16%)
Query: 105 RDSLGDFGCDYS-----FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
R+ + +FGC +S ++ + + G++++++ MS+ + PD
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-PD----------- 294
Query: 160 SNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKI 219
QY + L+NGL + G +++A + ++Q G+ P++ T N +
Sbjct: 295 -----QY-------------TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 220 LKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDL 279
+ LC G++ A + D ++ PN VT++TLI+ CKE ++E+A +L ++ +
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 280 VPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQ 339
+PD+ ++ LI GL + EL +G + D ++ ++D+ G + A+
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 340 TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFC 399
+M G +VI+Y+ LI G C+ + EA +F ++ + + + +TY++LIDG C
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 400 KSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
KS ++ D L D MI G KPD + +N+L
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDK------------------------------YTYNSL 546
Query: 460 MDGCCR---LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG--SLSSAILLFFQM 514
+ CR +K+A D V+ G +PD++T+ LI G+ G ++S +L QM
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNG---CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK-LMERNGVAPDIAIYNVLLNMLIKECN 573
LTP Y+ +I GLF+ + + +++F+ ++E+N PD Y ++ L CN
Sbjct: 604 KGINLTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL---CN 658
Query: 574 ----LDAALKLFGQLTDRGLEPD 592
+ A+ +L ++G P+
Sbjct: 659 GGGPIREAVDFLVELLEKGFVPE 681
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 182/368 (49%), Gaps = 6/368 (1%)
Query: 243 GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEG 302
G KP+ ++ ++N L+ + M + PD+ +++LI L +A +L+
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 303 NELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKG 362
+L GL D F++VM Y+ GD+ A++ ++M+ G + +S ++++ G
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 363 LCQQGRLVEACGLFGQVLIRR-LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKP 421
C++GR+ +A ++ + P T+++L++G CK+G ++ + D M++ G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 422 DAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLF 476
D + +I+GL + +A+ Q + PN +NTL+ C+ + + +L
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 477 MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
++ I PDV T LI+G+ + A+ LF +M +G PD TY+ +I L
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
+ L+M K ME +G A + YN L++ K A ++F ++ G+ + +TY
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 597 NTIICGYC 604
NT+I G C
Sbjct: 509 NTLIDGLC 516
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 147/332 (44%), Gaps = 55/332 (16%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPD------LVQRLMSCLVDSNSVGQYYK 168
Y+ LI + +++E+ E+ ++ GI PD L+Q L CL ++ V +
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGIL--PDVCTFNSLIQGL--CLTRNHRVA--ME 421
Query: 169 LCRAMRGKGFC-----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRL 223
L MR KG C Y L++ L KG ++ A +M +Q+ G +++T N ++
Sbjct: 422 LFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 224 CINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM-ME------ 276
C + A +FD + + G N VT++TLI+ CK ++E A QL + M ME
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 277 -------------------MDLV---------PDLIIYSILIDGLFKAGRLKEGNELLLT 308
D+V PD++ Y LI GL KAGR++ ++LL +
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 309 ALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP-NVISYSILIKGLCQQG 367
+G+ L ++ V+ A+ + ML P + +SY I+ +GLC G
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Query: 368 RLV-EACGLFGQVLIRRLEPSLLTYSSLIDGF 398
+ EA ++L + P + L +G
Sbjct: 661 GPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 15/265 (5%)
Query: 112 GCD-----YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
GC+ Y+ LI++ GK+DE++ + M G S L+ +N +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 167 YKLCRAMRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKR 222
++ M G Y L++GL + +E+A + Q+I G P+ T N +L
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 223 LCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN--LMMEMDLV 280
C G I A+ + + G +P++VT+ TLI+ CK ++E A +L M ++L
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSVMDAYV-GIGDVGRAV 338
P Y+ +I GLF+ + E L L++ D V + V G G + AV
Sbjct: 610 PH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAV 667
Query: 339 QTYDRMLNGGFLPNVISYSILIKGL 363
+L GF+P S +L +GL
Sbjct: 668 DFLVELLEKGFVPEFSSLYMLAEGL 692
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 159/652 (24%), Positives = 277/652 (42%), Gaps = 115/652 (17%)
Query: 51 AIQFFKWT--HNCVSSPNIAQLI----HVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLF 104
A++F KW + + +I QL+ H+L+++ M D A H+ ++ + GK+ F
Sbjct: 53 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 112
Query: 105 RDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
+ + Y LI Y+R G I +S+EIF M G S ++ +V S
Sbjct: 113 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS- 171
Query: 162 SVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILK 221
G+ V+ FL +++++R P++ T N ++
Sbjct: 172 -------------GEDVSVWSFL-----------------KEMLKRKICPDVATFNILIN 201
Query: 222 RLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVP 281
LC G +S L + G P +VT++T+++ +CK+ + + A +L + M +
Sbjct: 202 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 261
Query: 282 DLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY 341
D+ Y++LI L ++ R+ +G LL R + + V ++++++ + G V A Q
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 321
Query: 342 DRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKS 401
+ ML+ G PN ++++ LI G +G EA +F + + L PS ++Y L+DG CK+
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 381
Query: 402 GKL------------------------------RDGF-----SLYDNMIKRGLKPDAVVC 426
+ ++GF L + M K G+ PD V
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441
Query: 427 SLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGM 481
S LING A + R+ L PN I++TL+ CCR+ + ++++ M +
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501
Query: 482 Y-----------------------------------NIKPDVITHTVLIRGIASQGSLSS 506
I P+ ++ LI G + G
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561
Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
A +F +M K G P TY +++ GL KG ++ K + A D +YN LL
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQ 618
+ K NL A+ LFG++ R + PD TY ++I G C +I F +
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 237/505 (46%), Gaps = 18/505 (3%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRA-- 172
++ LI+ ++ G E++++F M G L+P V L+D + L R
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKG--LTPSEVS--YGVLLDGLCKNAEFDLARGFY 391
Query: 173 --MRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
M+ G CV Y +++GL + G ++ A + ++ + G P+IVT + ++ C
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 451
Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
G+ A + + VG PN + +STLI C+ L++A ++Y M+ D +
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511
Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
++L+ L KAG++ E E + G+ + V F +++ Y G+ +A +D M
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
G P +Y L+KGLC+ G L EA + + Y++L+ CKSG L
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 631
Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQS-VRMTLIPNLFIFNTLM 460
SL+ M++R + PD+ + LI+GL A+ F ++ R ++PN ++ +
Sbjct: 632 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 691
Query: 461 DGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLT 520
DG + + + M PD++T +I G + G + L +M +
Sbjct: 692 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 751
Query: 521 PDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKL 580
P++ TY+ ++HG K K++S +++ + NG+ PD + L+ + + L+ LK+
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 581 FGQLTDRGLEPDIITYNTIICGYCS 605
RG+E D T+N +I C+
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCA 836
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 16/506 (3%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLV--QRLMSCLVDSNSVGQYYKLCRA 172
Y+ LI + GK+ + ++ M G LSP+ V L+ + + + K+
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFG--LSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 173 MRGKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M KG Y L++GL + + A + ++ + G +T ++ LC NG
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+ A L + + G P++VT+S LIN FCK + + A ++ + + L P+ IIYS
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
LI + G LKE + + G D F+ ++ + G V A + M + G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
LPN +S+ LI G G ++A +F ++ P+ TY SL+ G CK G LR+
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
++ D V+ + L+ +G + A+ F + V+ +++P+ + + +L+ G
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 464 CRLKRATDTVKLFM--LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
CR K T LF N+ P+ + +T + G+ G + I QM G TP
Sbjct: 659 CR-KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 717
Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
D++T +A+I G + I + M P++ YN+LL+ K ++ + L+
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 582 GQLTDRGLEPDIITYNTIICGYCSLN 607
+ G+ PD +T ++++ G C N
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESN 803
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 131/549 (23%), Positives = 239/549 (43%), Gaps = 45/549 (8%)
Query: 102 RLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSN 161
R++R L G YS LI N R+G + E++ I+ M G L++ L +
Sbjct: 463 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522
Query: 162 SVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
V + + R M G ++ L+NG G AF + ++ + G P T
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582
Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
+LK LC G + A L V + V ++TL+ A CK L KA L+ M++
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642
Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKL-DVVVFSSVMDAYVGIGDVGR 336
++PD Y+ LI GL + G+ A RG L + V+++ +D G
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702
Query: 337 AVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLID 396
+ ++M N G P++++ + +I G + G++ + L ++ + P+L TY+ L+
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762
Query: 397 GFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLING-----LMGDALRFFFQSVRMTLIP 451
G+ K + F LY ++I G+ PD + C L+ G ++ L+ + +
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822
Query: 452 NLFIFNTLMDGCC---RLKRATDTVKLFMLMGM--------------------------- 481
+ + FN L+ CC + A D VK+ +G+
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882
Query: 482 -----YNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKG 536
I P+ + LI G+ G + +A ++ +M+ + P + SA++ L K
Sbjct: 883 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942
Query: 537 KNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITY 596
+ + M + + P IA + L+++ K N+ AL+L +++ GL+ D+++Y
Sbjct: 943 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002
Query: 597 NTIICGYCS 605
N +I G C+
Sbjct: 1003 NVLITGLCA 1011
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 195/433 (45%), Gaps = 16/433 (3%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ L+ + G + ++V +F M I L+S L +
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 175 GKG-----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI 229
+G +Y ++G+ + G + + Q+ G P+IVT N ++ G+I
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 230 GNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSIL 289
+ L + PN+ T++ L++ + K + +F LY ++ ++PD + L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 290 IDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGF 349
+ G+ ++ L+ G ++L + RG+++D F+ ++ G++ A M + G
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 350 LPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFS 409
+ + ++ L + R E+ + ++ + + P Y LI+G C+ G ++ F
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915
Query: 410 LYDNMIKRGLKPDAVVCSLLINGLM--GDA------LRFFFQSVRMTLIPNLFIFNTLMD 461
+ + MI + P V S ++ L G A LRF ++M L+P + F TLM
Sbjct: 916 VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM---LKMKLVPTIASFTTLMH 972
Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
CC+ + ++L ++M +K D++++ VLI G+ ++G ++ A L+ +M G
Sbjct: 973 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 522 DVITYSAIIHGLF 534
+ TY A+I GL
Sbjct: 1033 NATTYKALIRGLL 1045
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 171/413 (41%), Gaps = 51/413 (12%)
Query: 100 FFRLFRDSLGDFG--CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
+FR D+LG + +I+ Y R+GKI+++ ++ M +
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN--------------- 749
Query: 158 VDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCN 217
G Y L++G ++ + +F ++R +I G +P+ +TC+
Sbjct: 750 ----------------GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 218 KILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEM 277
++ +C + + + + G + + TF+ LI+ C ++ AF L +M +
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853
Query: 278 DLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRA 337
+ D ++ L + R +E +L +G+ + + +++ +GD+ A
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913
Query: 338 VQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDG 397
+ M+ P ++ S +++ L + G+ EA L +L +L P++ ++++L+
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973
Query: 398 FCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPN 452
CK+G + + L M GLK D V ++LI GL M A + + + N
Sbjct: 974 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033
Query: 453 LFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
+ L+ G L R T D+I +L RG + SLS
Sbjct: 1034 ATTYKALIRGL--LARETAFS-----------GADIILKDLLARGFITSMSLS 1073
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 13/239 (5%)
Query: 386 PSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDA-----LRF 440
PS+ Y LI + + G ++D ++ M G P C+ ++ ++ F
Sbjct: 123 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180
Query: 441 FFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIAS 500
+ ++ + P++ FN L++ C + L M P ++T+ ++
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 501 QGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAI 560
+G +AI L M +G+ DV TY+ +IH L + I+ G + + M + + P+
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300
Query: 561 YNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKSQI 619
YN L+N E + A +L ++ GL P+ +T+N +I G+ S +G FK +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS------EGNFKEAL 353
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 233/493 (47%), Gaps = 31/493 (6%)
Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM----RGKGFCVYEFLMNGL------LRK 191
G Y SP + L+ S YKL + M G+ VY L+ + L
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 192 GVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTF 251
+++ A + +++ G V N + + + LC G+ A S+ ++ G P+ T+
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
S ++N C +K+E AF L+ M LV D+ Y+I++D KAG +++ + +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
G +VV +++++ AY+ V A + ++ ML+ G LPN+++YS LI G C+ G++ +
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 372 ACGLFGQVLIRR----------------LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMI 415
AC +F ++ + P+++TY +L+DGFCKS ++ + L D M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 416 KRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRAT 470
G +P+ +V LI+GL + +A + L+ +++L+D ++KR
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 471 DTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
K+ M + P+V+ +T +I G+ G A L M ++G P+V+TY+A+I
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
G I L + + M GVAP+ Y VL++ K LD A L ++
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846
Query: 591 PDIITYNTIICGY 603
Y +I G+
Sbjct: 847 THTAGYRKVIEGF 859
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 229/506 (45%), Gaps = 91/506 (17%)
Query: 188 LLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPN 247
L G E AF + R++I +GF+P+ T +K+L LC ++ A LF+ + G +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 248 VVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLL 307
V T++ ++++FCK +E+A + +N M E+ P+++ Y+ LI KA ++ NEL
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 308 TALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRML----------------NGGFLP 351
T L G ++V +S+++D + G V +A Q ++RM + P
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
NV++Y L+ G C+ R+ EA L + + EP+ + Y +LIDG CK GKL + +
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 412 DNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
M + G S LI+ A + + + + PN+ I+ ++DG C++
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
+ + KL +M +P+V+T+T +I G G + + + L +M +G+ P+ +TY
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 527 SAIIHGLFKGKNISVGLHMFKLMER---------------------------------NG 553
+I K + V ++ + M++ +
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDD 877
Query: 554 VAPDIAIYNVLLNMLIKECNLDAALKL--------------------------------- 580
AP +++Y +L++ LIK L+ AL+L
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 937
Query: 581 ----FGQLTDRGLEPDIITYNTIICG 602
F ++T +G+ P++ ++ ++I G
Sbjct: 938 AFQLFSEMTKKGVIPEMQSFCSLIKG 963
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 220/491 (44%), Gaps = 58/491 (11%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ +++++ + G I+++ + F M ++G +P++V
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGC--TPNVV------------------------ 554
Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
Y L++ L+ + A + ++ G +PNIVT + ++ C GQ+ A
Sbjct: 555 -----TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 235 LF----------DVLLLV------GPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
+F DV + +PNVVT+ L++ FCK ++E+A +L + M
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAV 338
P+ I+Y LIDGL K G+L E E+ + G + +SS++D Y + A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 339 QTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGF 398
+ +ML PNV+ Y+ +I GLC+ G+ EA L + + +P+++TY+++IDGF
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 399 CKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNL 453
GK+ L + M +G+ P+ V +LI NG + D + ++ T P
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL-DVAHNLLEEMKQTHWPTH 848
Query: 454 FI-FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFF 512
+ +++G K +++ L +G + P + + +LI + L A+ L
Sbjct: 849 TAGYRKVIEGFN--KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
Query: 513 QM--LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIK 570
++ L TY+++I L + +F M + GV P++ + L+ L +
Sbjct: 907 EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966
Query: 571 ECNLDAALKLF 581
+ AL L
Sbjct: 967 NSKISEALLLL 977
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 139/648 (21%), Positives = 263/648 (40%), Gaps = 95/648 (14%)
Query: 48 PTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMVIQ--------FGKTYN 99
P+ I FF W + + A + + L+ +RD V ++ + Q FG+ N
Sbjct: 145 PSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLN 204
Query: 100 F----------FRLFRDSLG---DFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDM 141
F + + LG DF Y+ LI+ +++ ++D + I MS
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 142 GIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFC----VYEFLMNGLLRKGVIENA 197
+ + ++ L VG++ + + + F Y L++GL + E A
Sbjct: 265 NLRMDGFTLRCFAYSLC---KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 198 FHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINA 257
++ +PN+VT + +L Q+G + +++++ G P+ F++L++A
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL------FKAGRLKEGNELLLTALD 311
+C A++L M++ +P ++Y+ILI + L + L
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 312 RGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVE 371
G+ L+ + SS G +A M+ GF+P+ +YS ++ LC ++
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 372 ACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN 431
A LF ++ L + TY+ ++D FCK+G + ++ M + G P+ V + LI+
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 432 GLMGD-----ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLM------- 479
+ A F + +PN+ ++ L+DG C+ + ++F M
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 480 --GMY-------NIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
MY + +P+V+T+ L+ G + A L M G P+ I Y A+I
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 531 HGL-----------------------------------FKGKNISVGLHMFKLMERNGVA 555
GL FK K + + M N A
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
P++ IY +++ L K D A KL + ++G +P+++TY +I G+
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/557 (21%), Positives = 225/557 (40%), Gaps = 61/557 (10%)
Query: 66 NIAQLIHVLLQS--DMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYV 123
N+ Q++ ++ QS D R +A V + K+ F R FR+ L + S +IE
Sbjct: 86 NVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQFREKLSE-----SLVIEVLR 140
Query: 124 RIGKIDESVEIFAYMS-DMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYE 182
I + + F + +G + + L+ +V + + + +R V+
Sbjct: 141 LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFG 200
Query: 183 FLMNGLLRKGVIENAFHMHRQVIQR----GFVPNIVTCNKILKRLCINGQIGNASSLFDV 238
+N L+RK +F + + + R F P+ T N +++ ++ +AS +
Sbjct: 201 EFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 260
Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
+ L + + T + CK K +A L+ + VPD + Y+ LI GL +A
Sbjct: 261 MSLANLRMDGFTLRCFAYSLCKVGKWREAL---TLVETENFVPDTVFYTKLISGLCEASL 317
Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
+E + L +RM LPNV++YS
Sbjct: 318 FEEAMDFL-----------------------------------NRMRATSCLPNVVTYST 342
Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
L+ G + +L + +++ PS ++SL+ +C SG + L M+K G
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 419 LKPDAVVCSLLINGLMGD-----------ALRFFFQSVRMTLIPNLFIFNTLMDGCCRLK 467
P VV ++LI + GD A + + + + ++ N ++ C
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 462
Query: 468 RATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYS 527
+ + M PD T++ ++ + + + A LLF +M + GL DV TY+
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 528 AIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDR 587
++ K I F M G P++ Y L++ +K + A +LF +
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 588 GLEPDIITYNTIICGYC 604
G P+I+TY+ +I G+C
Sbjct: 583 GCLPNIVTYSALIDGHC 599
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 81/356 (22%)
Query: 102 RLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEIFAYMSDMG----IYLSPDLVQR 152
R D++ GC+ Y LI+ ++GK+DE+ E+ MS+ G +Y L+ R
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718
Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPN 212
+ K+ +Y +++GL + G + A+ + + + ++G PN
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 213 IVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYN 272
+VT ++ + G+I L + + G PN VT+ LI+ CK L+ A +N
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA---HN 835
Query: 273 LMMEM------------------------------------DLVPDLIIYSILIDGLFKA 296
L+ EM D P L +Y +LID L KA
Sbjct: 836 LLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895
Query: 297 GRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISY 356
RL E+ L L+ +V FS+ + Y +Y
Sbjct: 896 QRL----EMALRLLE-----EVATFSATLVDYSS------------------------TY 922
Query: 357 SILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYD 412
+ LI+ LC ++ A LF ++ + + P + ++ SLI G ++ K+ + L D
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 247/507 (48%), Gaps = 34/507 (6%)
Query: 100 FFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVD 159
F ++ ++ +S LIE + + G++++++E + M +G+ S V ++ +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 160 SNSVGQYYKLCRAMRGKGFC---VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTC 216
+ KL G V +++ L ++G + A + ++ RG PN+V+
Sbjct: 422 GQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSY 481
Query: 217 NKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMME 276
N ++ C + A +F +L G KPN T+S LI+ + + A ++ N M
Sbjct: 482 NNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541
Query: 277 MDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD-RGLKLDVVVFSSVMDAYVGIGDVG 335
++ + ++Y +I+GL K G+ + ELL ++ + L + + ++S++D + G++
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601
Query: 336 RAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLI 395
AV Y+ M G PNVI+Y+ L+ GLC+ R+ +A + ++ + ++ + Y +LI
Sbjct: 602 SAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661
Query: 396 DGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRMTLIPNLFI 455
DGFCK + +L+ +++ GL P I
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQP------------------------------I 691
Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
+N+L+ G L + L+ M ++ D+ T+T LI G+ G+L A L+ +M
Sbjct: 692 YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQ 751
Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
GL PD I Y+ I++GL K + MF+ M++N V P++ IYN ++ +E NLD
Sbjct: 752 AVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLD 811
Query: 576 AALKLFGQLTDRGLEPDIITYNTIICG 602
A +L ++ D+G+ PD T++ ++ G
Sbjct: 812 EAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 157/640 (24%), Positives = 288/640 (45%), Gaps = 70/640 (10%)
Query: 31 QFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQ----LIHVLLQSDMRDVASHV 86
Q + A+ I L + NNP A++F+ W S LIH+L+ S +
Sbjct: 69 QKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSP--ETYGRA 126
Query: 87 FDKMVIQFGKTYN-------FFRLFRDSLGDFGCD-----YSFLIENYVRIGKIDESVEI 134
D ++I++ T N DS FG + +++L+ Y + + D +V+I
Sbjct: 127 SD-LLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDI 185
Query: 135 FAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLR 190
M ++ + V R +S LV NS+ + +L M G + LM LR
Sbjct: 186 VNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLR 245
Query: 191 KGVIENAFHMHRQVIQRGFVPN-------IVTCNKIL--------------KRLCI---- 225
+ A + + I+RG P+ + C K L K+LC+
Sbjct: 246 EEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQE 305
Query: 226 -----------NGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLM 274
G + +A L D +L G NVV ++LI CK L A L++ M
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Query: 275 MEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDV 334
+ P+ + +S+LI+ K G +++ E GL V +++ ++
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425
Query: 335 GRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSL 394
A++ +D G L NV + ++ LC+QG+ EA L ++ R + P++++Y+++
Sbjct: 426 EEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Query: 395 IDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTL 449
+ G C+ + ++ N++++GLKP+ S+LI+G +AL +
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544
Query: 450 IPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKP---DVITHTVLIRGIASQGSLSS 506
N ++ T+++G C++ + + +L L M K +++ +I G +G + S
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKAREL--LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDS 602
Query: 507 AILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLN 566
A+ + +M G++P+VITY+++++GL K + L M M+ GV DI Y L++
Sbjct: 603 AVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALID 662
Query: 567 MLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
K N+++A LF +L + GL P YN++I G+ +L
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNL 702
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/567 (24%), Positives = 245/567 (43%), Gaps = 80/567 (14%)
Query: 117 FLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGK 176
L+ +R K E++E+ + + G L + + + L R M+ K
Sbjct: 238 LLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEK 297
Query: 177 GFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
CV Y ++ +++G +++A + +++ G N+V ++ C N + +
Sbjct: 298 KLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVS 357
Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
A LFD + GP PN VTFS LI F K ++EKA + Y M + L P + +I
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 292 G----------------------------------LFKAGRLKEGNELLLTALDRGLKLD 317
G L K G+ E ELL RG+ +
Sbjct: 418 GWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI----------------- 360
VV +++VM + ++ A + +L G PN +YSILI
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 361 ------------------KGLCQQGRLVEACGLFGQVLI-RRLEPSLLTYSSLIDGFCKS 401
GLC+ G+ +A L ++ +RL S ++Y+S+IDGF K
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 402 GKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIF 456
G++ + Y+ M G+ P+ + + L+NGL M AL + + ++ +
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 457 NTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLK 516
L+DG C+ LF + + P + LI G + G++ +A+ L+ +MLK
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
Query: 517 RGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDA 576
GL D+ TY+ +I GL K N+ + ++ M+ G+ PD IY V++N L K+
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVK 777
Query: 577 ALKLFGQLTDRGLEPDIITYNTIICGY 603
+K+F ++ + P+++ YN +I G+
Sbjct: 778 VVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 149/619 (24%), Positives = 276/619 (44%), Gaps = 60/619 (9%)
Query: 16 NKCYCSESKTHISDLQFNQANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLL 75
NK +CS+S QF + ++ NP+ + + +P +++ +
Sbjct: 22 NKPFCSQS-------QFPK---------ESENPSQEQRLLVYGSTSEENPVTSKVSLLSA 65
Query: 76 QSDMRDVASHVFDKMVIQFG------KTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
+ + +D AS V D ++ + + YN+ R +R S D G + LI V
Sbjct: 66 KPEQKDDAS-VIDVLLNRRNNPEAALRFYNWARPWRGSFED-GDVFWVLIHILV------ 117
Query: 130 ESVEIFAYMSDMGI-YLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV----YEFL 184
S E + SD+ I Y+S + S LV KL + + GF V + +L
Sbjct: 118 SSPETYGRASDLLIRYVSTSNPTPMASVLVS--------KLVDSAKSFGFEVNSRAFNYL 169
Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
+N + ++A + Q+++ +P N+ L L + A L+ ++ +G
Sbjct: 170 LNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGV 229
Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNE 304
+ VT L+ A +E K +A ++ + +E PD ++YS+ + K L N
Sbjct: 230 DGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANS 289
Query: 305 LLLTALDRGLKL-DVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
LL ++ L + ++SV+ A V G++ A++ D ML+ G NV++ + LI G
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
C+ LV A LF ++ P+ +T+S LI+ F K+G++ Y M GL P
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 424 VVCSLLINGLMG-----DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
+I G + +AL+ F +S T + N+F+ NT++ C+ + + +L
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFE-TGLANVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
M I P+V+++ ++ G Q ++ A ++F +L++GL P+ TYS +I G F+ +
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
L + M + + + +Y ++N L K A +L + +
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR--------- 579
Query: 599 IICGYCSLNSCLIDGYFKS 617
+C C + +IDG+FK
Sbjct: 580 -LCVSCMSYNSIIDGFFKE 597
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 202/413 (48%), Gaps = 29/413 (7%)
Query: 36 NAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLL----QSDMRDVASHVFDKMV 91
N IL+ L K A + + PN+ +V+L Q +M D+A VF ++
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNM-DLARIVFSNIL 505
Query: 92 IQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ 151
+ K N+ YS LI+ R ++E+ +M+ I ++ + Q
Sbjct: 506 EKGLKPNNY-------------TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQ 552
Query: 152 RLMSCLVDSNSVGQYYK----LCRAMRGKGFCV----YEFLMNGLLRKGVIENAFHMHRQ 203
+++ L VGQ K L + K CV Y +++G ++G +++A + +
Sbjct: 553 TIINGLC---KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
+ G PN++T ++ LC N ++ A + D + G K ++ + LI+ FCK +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
+E A L++ ++E L P IY+ LI G G + +L L GL+ D+ +++
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
++D + G++ A + Y M G +P+ I Y++++ GL ++G+ V+ +F ++
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD 436
+ P++L Y+++I G + G L + F L+D M+ +G+ PD +L++G +G+
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGN 842
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 140/267 (52%), Gaps = 8/267 (2%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRA 172
Y+ +I+ + + G++D +V + M GI SP+++ LM+ L +N + Q ++
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGI--SPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 173 MRGKG----FCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
M+ KG Y L++G ++ +E+A + ++++ G P+ N ++ G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+ A L+ +L G + ++ T++TLI+ K+ L A +LY M + LVPD IIY++
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
+++GL K G+ + ++ + +V+++++V+ + G++ A + +D ML+ G
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGL 375
LP+ ++ IL+ G + V A L
Sbjct: 825 ILPDGATFDILVSGQVGNLQPVRAASL 851
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 232/474 (48%), Gaps = 20/474 (4%)
Query: 153 LMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFLMNGLLRKGVIENAFHMHRQVIQR 207
+M N + L R M G CV Y+ L++ L + + A + ++
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHG-CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKA 267
G VP+ T N ++ LC +I A+ + + +L+ G P+ +T+ L+N CK +++ A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 268 FQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLKLDVVVFSSVMD 326
L+ + + P+++I++ LI G GRL + +L + G+ DV ++S++
Sbjct: 342 KDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
Y G VG A++ M N G PNV SY+IL+ G C+ G++ EA + ++ L+P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFF 441
+ + ++ LI FCK ++ + ++ M ++G KPD + LI+GL + AL
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
+ ++ N +NTL++ R + KL M D IT+ LI+G+
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
G + A LF +ML+ G P I+ + +I+GL + + + K M G PDI +
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS----LNSCLI 611
N L+N L + ++ L +F +L G+ PD +T+NT++ C ++CL+
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/542 (25%), Positives = 263/542 (48%), Gaps = 29/542 (5%)
Query: 70 LIHVLLQSDMRDVASHVFDKMVIQFGKTYNFFRLFRDSLGDFGCDYSFLIENYVRIGKID 129
++ +L+ + VA++VF M+ R +L FG +++ + + +ID
Sbjct: 188 VLEILVSGNCHKVAANVFYDMLS---------RKIPPTLFTFG----VVMKAFCAVNEID 234
Query: 130 ESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCV-----YEFL 184
++ + M+ G + + Q L+ L N V + +L M G CV + +
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG-CVPDAETFNDV 293
Query: 185 MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP 244
+ GL + I A M +++ RGF P+ +T ++ LC G++ A LF + P
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----P 349
Query: 245 KPNVVTFSTLINAFCKEAKLEKAFQ-LYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGN 303
KP +V F+TLI+ F +L+ A L +++ +VPD+ Y+ LI G +K G +
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 304 ELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGL 363
E+L ++G K +V ++ ++D + +G + A + M G PN + ++ LI
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 364 CQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDA 423
C++ R+ EA +F ++ + +P + T++SLI G C+ +++ L +MI G+ +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 424 VVCSLLIN-----GLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFML 478
V + LIN G + +A + + V + +N+L+ G CR LF
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 479 MGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKN 538
M P I+ +LI G+ G + A+ +M+ RG TPD++T++++I+GL +
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 539 ISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
I GL MF+ ++ G+ PD +N L++ L K + A L + + G P+ T++
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 599 II 600
++
Sbjct: 710 LL 711
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 227/491 (46%), Gaps = 20/491 (4%)
Query: 128 IDESVEIFAYM-SDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGFCVYEFLMN 186
+ S+E+F++ S G S D+ Q L+ L + +L M+ +G E L
Sbjct: 91 VSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFI 150
Query: 187 GLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQI---GN----ASSLFDVL 239
++R + A + + N+ +C K + +I GN A+++F +
Sbjct: 151 SIMRD--YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDM 208
Query: 240 LLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRL 299
L P + TF ++ AFC +++ A L M + VP+ +IY LI L K R+
Sbjct: 209 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 268
Query: 300 KEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSIL 359
E +LL G D F+ V+ + A + +RML GF P+ I+Y L
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 360 IKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKR-G 418
+ GLC+ GR+ A LF R +P ++ +++LI GF G+L D ++ +M+ G
Sbjct: 329 MNGLCKIGRVDAAKDLF----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 419 LKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
+ PD + LI GL+G AL PN++ + L+DG C+L + +
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
+ M +KP+ + LI + + A+ +F +M ++G PDV T++++I GL
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 534 FKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDI 593
+ I L + + M GV + YN L+N ++ + A KL ++ +G D
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 594 ITYNTIICGYC 604
ITYN++I G C
Sbjct: 565 ITYNSLIKGLC 575
Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 219/466 (46%), Gaps = 41/466 (8%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y LI + + +++E++++ M MG + ++ L + + + K+ M
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 175 GKGFC----VYEFLMNGLLRKGVIENA---------------------FHMHRQ------ 203
+GF Y +LMNGL + G ++ A F H +
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 204 -----VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAF 258
V G VP++ T N ++ G +G A + + G KPNV +++ L++ F
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 259 CKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDV 318
CK K+++A+ + N M L P+ + ++ LI K R+ E E+ +G K DV
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 319 VVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQ 378
F+S++ + ++ A+ M++ G + N ++Y+ LI ++G + EA L +
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 379 VLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL----- 433
++ + +TY+SLI G C++G++ SL++ M++ G P + C++LINGL
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 434 MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTV 493
+ +A+ F + V P++ FN+L++G CR R D + +F + I PD +T
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 494 LIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNI 539
L+ + G + A LL + ++ G P+ T+S ++ + + +
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 181/399 (45%), Gaps = 58/399 (14%)
Query: 70 LIHVLLQSDMRDVASHVFDKMVIQFGK-----TYN--FFRLFRDSL-----------GDF 111
LIH + D A V MV +G TYN + +++ L +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 112 GC-----DYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQY 166
GC Y+ L++ + ++GKIDE+ + MS G L P+ V +CL+ +
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG--LKPNTVG--FNCLISA------ 468
Query: 167 YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCIN 226
C+ R I A + R++ ++G P++ T N ++ LC
Sbjct: 469 --FCKEHR-------------------IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 227 GQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIY 286
+I +A L ++ G N VT++TLINAF + ++++A +L N M+ D I Y
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 287 SILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLN 346
+ LI GL +AG + + L L G + + +++ G V AV+ M+
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 347 GGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRD 406
G P++++++ LI GLC+ GR+ + +F ++ + P +T+++L+ CK G + D
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 407 GFSLYDNMIKRGLKPDAVVCSLLINGLMG----DALRFF 441
L D I+ G P+ S+L+ ++ D RF+
Sbjct: 688 ACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFY 726
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 455 IFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
+ L+ G C A +F M I P + T V+++ + + SA+ L M
Sbjct: 188 VLEILVSGNCHKVAAN----VFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
K G P+ + Y +IH L K ++ L + + M G PD +N ++ L K +
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
+ A K+ ++ RG PD ITY ++ G C +
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Query: 472 TVKLFMLM-GMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAII 530
T +L + M +Y+ +P ++ V++ + S A +F+ ML R + P + T+ ++
Sbjct: 165 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 224
Query: 531 HGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLE 590
I L + + M ++G P+ IY L++ L K ++ AL+L ++ G
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 591 PDIITYNTIICGYCSLN 607
PD T+N +I G C +
Sbjct: 285 PDAETFNDVILGLCKFD 301
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 217/436 (49%), Gaps = 6/436 (1%)
Query: 175 GKGFCVY-EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNAS 233
+ F Y E L G L E+AF + +++ +P+IV ++L +
Sbjct: 32 ARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI 91
Query: 234 SLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGL 293
+ L G ++ +F+ LI+ FC+ ++L A + MM++ P ++ + L+ G
Sbjct: 92 YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF 151
Query: 294 FKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNV 353
R+ + L++ + G + +VVV+++++D G++ A++ + M G +V
Sbjct: 152 CLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211
Query: 354 ISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDN 413
++Y+ L+ GLC GR +A + ++ R + P ++T+++LID F K G L + LY
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 414 MIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKR 468
MI+ + P+ V + +INGL + DA + F PN+ +NTL+ G C+ +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 469 ATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSA 528
+ +KLF M D+ T+ LI G G L A+ +F M+ R +TPD+IT+
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 529 IIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRG 588
++HGL I L F M + I YN++++ L K ++ A +LF +L G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 589 LEPDIITYNTIICGYC 604
++PD TY +I G C
Sbjct: 452 VKPDARTYTIMILGLC 467
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 195/387 (50%), Gaps = 30/387 (7%)
Query: 203 QVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEA 262
++++ G+ P+IVT +L C+ +IG+A SL +++ G +PNVV ++TLI+ CK
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 263 KLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFS 322
+L A +L N M + L D++ Y+ L+ GL +GR + +L + R + DVV F+
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 323 SVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIR 382
+++D +V G++ A + Y M+ PN ++Y+ +I GLC GRL +A F + +
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 383 RLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF 442
P+++TY++LI GFCK + +G L+ M G D
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD-------------------- 350
Query: 443 QSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQG 502
+F +NTL+ G C++ + + +F M + PD+ITH +L+ G+ G
Sbjct: 351 ----------IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 503 SLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYN 562
+ SA++ F M + ++ Y+ +IHGL K + +F + GV PD Y
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 563 VLLNMLIKECNLDAALKLFGQLTDRGL 589
+++ L K A +L ++ + G+
Sbjct: 461 IMILGLCKNGPRREADELIRRMKEEGI 487
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 187/399 (46%), Gaps = 47/399 (11%)
Query: 220 LKRLCINGQIGNASSLFDVLL---LVGPKPNVVTFS----TLINAFCKEAKLEKAFQLYN 272
++RL + G + + F ++ L+G FS L F + E AF L+
Sbjct: 1 MRRLIVTGIATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFF 60
Query: 273 LMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIG 332
M+ +P ++ ++ L+ R + V+ FS M+ Y
Sbjct: 61 EMVHSQPLPSIVDFTRLLTATANLRRYET----------------VIYFSQKMELY---- 100
Query: 333 DVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYS 392
G ++ S++ILI C+ RL A + G+++ EPS++T+
Sbjct: 101 ---------------GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFG 145
Query: 393 SLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRM 447
SL+ GFC ++ D FSL M+K G +P+ VV + LI+GL + AL + +
Sbjct: 146 SLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205
Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
L ++ +NTL+ G C R +D ++ M +I PDV+T T LI QG+L A
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
L+ +M++ + P+ +TY++II+GL + F LM G P++ YN L++
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
K +D +KLF +++ G DI TYNT+I GYC +
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 131/347 (37%), Gaps = 114/347 (32%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ LI+ + G+++ ++E+ M G+ L++ L S ++ R M
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
+ + L++ +++G ++ A +++++IQ PN VT N I+ LC++G++
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 231 NASSLFDVLLLVGPKPNVVTFSTL-----------------------------------I 255
+A FD++ G PNVVT++TL I
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 256 NAFCKEAKLEKAFQLYNLMMEMDLVPDLII------------------------------ 285
+ +C+ KL A ++ M+ + PD+I
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 286 -----YSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
Y+I+I GL KA ++++ EL G+K
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK------------------------- 453
Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
P+ +Y+I+I GLC+ G EA LIRR++
Sbjct: 454 ----------PDARTYTIMILGLCKNGPRREA-----DELIRRMKEE 485
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 53/104 (50%)
Query: 504 LSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNV 563
A LFF+M+ P ++ ++ ++ + ++ + ME G++ D+ + +
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 564 LLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN 607
L++ + L AL + G++ G EP I+T+ +++ G+C +N
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/508 (24%), Positives = 243/508 (47%), Gaps = 10/508 (1%)
Query: 113 CDYSF--LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLC 170
C Y++ +I Y GK DE+ + G S +++CL V + K+
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 366
Query: 171 RAMR---GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
M+ Y L++ L R G ++ AF + + + G PN+ T N ++ RLC +
Sbjct: 367 EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
++ A ++F+ + P+ +TF +LI+ K +++ A+++Y M++ D + I+Y+
Sbjct: 427 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 486
Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
LI F GR ++G+++ +++ D+ + ++ MD G+ + ++ +
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
F+P+ SYSILI GL + G E LF + + Y+ +IDGFCK GK+
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
+ L + M +G +P V +I+GL + +A F ++ + N+ I+++L+DG
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
++ R + + + + P++ T L+ + ++ A++ F M + TP+
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
+TY +I+GL K + + ++ M++ G+ P Y +++ L K N+ A LF
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 583 QLTDRGLEPDIITYNTIICGYCSLNSCL 610
+ G PD YN +I G + N +
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAM 814
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 236/508 (46%), Gaps = 45/508 (8%)
Query: 93 QFGKTYNFFRLFRDSLGDFGCD---YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
+ GK ++F + D + Y+ LI+ R GK+D + E+ M G++ +
Sbjct: 355 KMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 150 VQRLMSCLVDSNSVGQY--------YKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMH 201
V ++ L S + + YK+C FC L++GL + G +++A+ ++
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE-ITFCS---LIDGLGKVGRVDDAYKVY 470
Query: 202 RQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKE 261
+++ N + ++K +G+ + ++ ++ P++ +T ++ K
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 262 AKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVF 321
+ EK ++ + VPD YSILI GL KAG E EL + ++G LD +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 322 SSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLI 381
+ V+D + G V +A Q + M GF P V++Y +I GL + RL EA LF +
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 382 RRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFF 441
+R+E +++ YSSLIDGF K G++ + + + + ++++G
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG----------------------- 687
Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
L PNL+ +N+L+D + + + + F M P+ +T+ +LI G+
Sbjct: 688 -------LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
+ A + + +M K+G+ P I+Y+ +I GL K NI+ +F + NG PD A Y
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGL 589
N ++ L A LF + RGL
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 241/503 (47%), Gaps = 14/503 (2%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSN----SVGQYYK 168
Y+ I+++ ++GK+D + + F + G L PD V ++ L +N +V +
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANG--LKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
L + R Y ++ G G + A+ + + +G +P+++ N IL L G+
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+ A +F+ + PN+ T++ LI+ C+ KL+ AF+L + M + L P++ +I
Sbjct: 359 VDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGG 348
++D L K+ +L E + + D + F S++D +G V A + Y++ML+
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
N I Y+ LIK GR + ++ ++ + P L ++ +D K+G+ G
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 409 SLYDNMIKRGLKPDAVVCSLLINGLM-----GDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
++++ + R PDA S+LI+GL+ + F+ + + +N ++DG
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
C+ + +L M +P V+T+ +I G+A L A +LF + + + +V
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
+ YS++I G K I + + + + G+ P++ +N LL+ L+K ++ AL F
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 584 LTDRGLEPDIITYNTIICGYCSL 606
+ + P+ +TY +I G C +
Sbjct: 718 MKELKCTPNQVTYGILINGLCKV 740
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/617 (20%), Positives = 261/617 (42%), Gaps = 37/617 (5%)
Query: 23 SKTHISDLQFN-QANAILANLIKTNNPTPAIQFFKWTHNCVSSPNIAQLIHVLLQSDMR- 80
++ +S L F Q ++ L + + AI++F+W P+ + + LL R
Sbjct: 52 AENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARC 111
Query: 81 ---DVASHVFDKM-VIQFGKT--------------------YNFFRLFRD-SLGDFGCDY 115
D + +M V FG + Y+ ++ R Y
Sbjct: 112 RNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAY 171
Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRG 175
+ LI + + D + +F M ++G + L L+ V L M+
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231
Query: 176 KGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGN 231
+Y ++ + G ++ A+ ++ G P+ VT ++ LC ++
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291
Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
A +F+ L P ++T+I + K ++A+ L +P +I Y+ ++
Sbjct: 292 AVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351
Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLP 351
L K G++ E + + + + ++ ++ ++D G + A + D M G P
Sbjct: 352 CLRKMGKVDEALK-VFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410
Query: 352 NVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLY 411
NV + +I++ LC+ +L EAC +F ++ + P +T+ SLIDG K G++ D + +Y
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 412 DNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
+ M+ + +++V + LI +G D + + + P+L + NT MD +
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
+F + PD ++++LI G+ G + LF+ M ++G D Y
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
+ +I G K ++ + + M+ G P + Y +++ L K LD A LF +
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 587 RGLEPDIITYNTIICGY 603
+ +E +++ Y+++I G+
Sbjct: 651 KRIELNVVIYSSLIDGF 667
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 35/278 (12%)
Query: 331 IGDVGRAVQ---TYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPS 387
+ DV RA++ Y+R P + +L+ C+ ++ + G++ + PS
Sbjct: 75 LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQ--ILGEMSVAGFGPS 132
Query: 388 LLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFFQSVRM 447
+ T ++ G K+ KLR+G+ + M K F F+
Sbjct: 133 VNTCIEMVLGCVKANKLREGYDVVQMMRK-----------------------FKFR---- 165
Query: 448 TLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSA 507
P + TL+ + + + LF M +P V T LIRG A +G + SA
Sbjct: 166 ---PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222
Query: 508 ILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNM 567
+ L +M L D++ Y+ I K + + F +E NG+ PD Y ++ +
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 568 LIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
L K LD A+++F L P YNT+I GY S
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 462 GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTP 521
GC + + + + +M + +P +T LI ++ + LF QM + G P
Sbjct: 142 GCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEP 201
Query: 522 DVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLF 581
V ++ +I G K + L + M+ + + DI +YNV ++ K +D A K F
Sbjct: 202 TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF 261
Query: 582 GQLTDRGLEPDIITYNTIICGYCSLN 607
++ GL+PD +TY ++I C N
Sbjct: 262 HEIEANGLKPDEVTYTSMIGVLCKAN 287
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 242/494 (48%), Gaps = 46/494 (9%)
Query: 107 SLGDFGCD-----YSFLIENYVRIGKI-DESVEIFAYMSDMGIYLSPDLVQRLMSCLVDS 160
S+ FGC+ Y+ LI+ + R G I S+ + + + G PD+V
Sbjct: 81 SMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVS--------- 131
Query: 161 NSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKIL 220
+ L NG + +++ F ++ V+ + PN+VT + +
Sbjct: 132 --------------------FNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWI 170
Query: 221 KRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLV 280
C +G++ A F + PNVVTF+ LI+ +CK LE A LY M + +
Sbjct: 171 DTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS 230
Query: 281 PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQT 340
+++ Y+ LIDG K G ++ E+ ++ ++ + +V+++++D + GD A++
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKF 290
Query: 341 YDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCK 400
+MLN G ++ +Y ++I GLC G+L EA + + L P ++ ++++++ + K
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 350
Query: 401 SGKLRDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFI 455
SG+++ ++Y +I+RG +PD V S +I NG + +A+ +F N +
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----CIEKANDVM 405
Query: 456 FNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQML 515
+ L+D C+ + +LF + + PD +T I G+ QG+L A L +M+
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 516 KRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLD 575
+ GL D++ Y+ +I+GL + +F M +G++PD A++++L+ KE N+
Sbjct: 466 QEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMA 525
Query: 576 AALKLFGQLTDRGL 589
AA L + RGL
Sbjct: 526 AASDLLLDMQRRGL 539
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 225/422 (53%), Gaps = 21/422 (4%)
Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
++ RG+ P+ + N ++ +C GQ+ A + + G +P+V+++++LI+ C+
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 264 LEKA-FQLYNLMMEMDLV--PDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVV 320
+ A L +L + PD++ ++ L +G K L E + + + + +VV
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVT 165
Query: 321 FSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVL 380
+S+ +D + G++ A++++ M PNV++++ LI G C+ G L A L+ ++
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 381 IRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD-- 436
R+ +++TY++LIDGFCK G+++ +Y M++ ++P+++V + +I+G GD
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 437 -ALRFFFQSVRMTLIPNLFIFNTLMDGCC---RLKRATDTVKLFMLMGMYNIKPDVITHT 492
A++F + + + ++ + ++ G C +LK AT+ V+ M ++ PD++ T
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE---DMEKSDLVPDMVIFT 342
Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
++ G + +A+ ++ ++++RG PDV+ S +I G+ K + + F + + N
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAN 402
Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLID 612
V +Y VL++ L KE + +LF ++++ GL PD Y + I G C + L+D
Sbjct: 403 DV-----MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN-LVD 456
Query: 613 GY 614
+
Sbjct: 457 AF 458
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 206/434 (47%), Gaps = 39/434 (8%)
Query: 208 GFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGP---KPNVVTFSTLINAFCKEAKL 264
G P++++ N ++ C NG I +AS + + L KP++V+F++L N F K L
Sbjct: 86 GCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKML 145
Query: 265 EKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSV 324
++ F +M++ P+++ YS ID K+G L+ + + L +VV F+ +
Sbjct: 146 DEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204
Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
+D Y GD+ AV Y M NV++Y+ LI G C++G + A ++ +++ R+
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264
Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG-----DALR 439
EP+ L Y+++IDGF + G + M+ +G++ D ++I+GL G +A
Sbjct: 265 EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATE 324
Query: 440 FFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIA 499
+ L+P++ IF T+M+ + R V ++ + +PDV+ + +I GIA
Sbjct: 325 IVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIA 384
Query: 500 SQGSLSSAIL------------------------------LFFQMLKRGLTPDVITYSAI 529
G L AI+ LF ++ + GL PD Y++
Sbjct: 385 KNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW 444
Query: 530 IHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGL 589
I GL K N+ + M + G+ D+ Y L+ L + + A ++F ++ + G+
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI 504
Query: 590 EPDIITYNTIICGY 603
PD ++ +I Y
Sbjct: 505 SPDSAVFDLLIRAY 518
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 200/415 (48%), Gaps = 38/415 (9%)
Query: 193 VIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLV-GPKPNVVTF 251
++ A ++ + +P+ TCNK + +L IN G S F L+ G P+ +F
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQL-INSNCGILSLKFLAYLVSRGYTPHRSSF 59
Query: 252 STLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALD 311
+++++ CK +++ A + + M PD+I Y+ LIDG + G ++ + L+L +L
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS-LVLESLR 118
Query: 312 RG----LKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQG 367
K D+V F+S+ + + + + V Y ++ PNV++YS I C+ G
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 368 RLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCS 427
L A F + L P+++T++ LIDG+CK+G L SLY M
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM------------- 224
Query: 428 LLINGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPD 487
+ VRM+L N+ + L+DG C+ +++ M ++P+
Sbjct: 225 ---------------RRVRMSL--NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267
Query: 488 VITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
+ +T +I G +G +A+ +ML +G+ D+ Y II GL + + +
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327
Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICG 602
ME++ + PD+ I+ ++N K + AA+ ++ +L +RG EPD++ +T+I G
Sbjct: 328 DMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG 382
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 138/278 (49%), Gaps = 9/278 (3%)
Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
V A+Q R+ LP+ + + I L + + ++ R P +++S
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLM--GD--ALRFFFQSVRMT- 448
++ CK G+++ + +M + G +PD + + LI+G GD + +S+R +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 449 ---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLS 505
P++ FN+L +G ++K D V ++M + + P+V+T++ I G L
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMK-MLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 506 SAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLL 565
A+ F M + L+P+V+T++ +I G K ++ V + ++K M R ++ ++ Y L+
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 566 NMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
+ K+ + A +++ ++ + +EP+ + Y TII G+
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 404 LRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFFFQSVRMTLIPNLFIFNT 458
+R+ + K PD C+ I+ L+ +L+F V P+ FN+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 459 LMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-LKR 517
++ C+L + + M + +PDVI++ LI G G + SA L+ +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 518 GL--TPDVITYSAIIHGLFKGKNI-SVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
G PD+++++++ +G K K + V ++M +++ +P++ Y+ ++ K L
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK--CCSPNVVTYSTWIDTFCKSGEL 179
Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNSCLIDGYFKS 617
ALK F + L P+++T+ +CLIDGY K+
Sbjct: 180 QLALKSFHSMKRDALSPNVVTF-----------TCLIDGYCKA 211
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/564 (24%), Positives = 260/564 (46%), Gaps = 106/564 (18%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
++ I + + GK++E+V++F+ M + G+ +P++V
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGV--APNVV------------------------ 309
Query: 175 GKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASS 234
+ +++GL G + AF ++++RG P ++T + ++K L +IG+A
Sbjct: 310 -----TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF 364
Query: 235 LFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLF 294
+ + G PNV+ ++ LI++F + L KA ++ +LM+ L Y+ LI G
Sbjct: 365 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 424
Query: 295 KAGRLKEGNELLLTALDRGLKLDVVVFSSVM---------DA---YVGI----------- 331
K G+ LL L G ++ F+SV+ D+ +VG
Sbjct: 425 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 484
Query: 332 ------------GDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQV 379
G +A++ + + LN GF+ + + + L+ GLC+ G+L EA + ++
Sbjct: 485 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 544
Query: 380 LIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMG---- 435
L R ++Y++LI G C KL + F D M+KRGLKPD S+LI GL
Sbjct: 545 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 604
Query: 436 -DALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVL 494
+A++F+ R ++P+++ ++ ++DGCC+ +R + + F M N++P+ + + L
Sbjct: 605 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 664
Query: 495 IRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGV 554
IR G LS A+ L M +G++P+ TY+++I G+ + +F+ M G+
Sbjct: 665 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 724
Query: 555 APDIAIYNVLLN-------MLIKEC----------------------------NLDAALK 579
P++ Y L++ M+ EC N+ A +
Sbjct: 725 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 784
Query: 580 LFGQLTDRGLEPDIITYNTIICGY 603
L ++ ++G+ PD ITY I GY
Sbjct: 785 LLNEMREKGIVPDSITYKEFIYGY 808
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 235/500 (47%), Gaps = 17/500 (3%)
Query: 117 FLIENYVRIGKIDE---SVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM 173
LIE Y K D ++++F +++ G++ S L++ LV +N ++ K C A
Sbjct: 206 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRAN---EFQKCCEAF 262
Query: 174 ----RGKGFCVYEFL--MNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
+G VY F +N + G +E A + ++ + G PN+VT N ++ L + G
Sbjct: 263 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 322
Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
+ A + ++ G +P ++T+S L+ + ++ A+ + M + P++I+Y+
Sbjct: 323 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 382
Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
LID +AG L + E+ + +GL L +++++ Y G A + ML+
Sbjct: 383 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 442
Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
GF N S++ +I LC A G++L+R + P ++LI G CK GK
Sbjct: 443 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 502
Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDG 462
L+ + +G D + L++GL + +A R + + + + +NTL+ G
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562
Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPD 522
CC K+ + M +KPD T+++LI G+ + + AI + + G+ PD
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622
Query: 523 VITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFG 582
V TYS +I G K + G F M V P+ +YN L+ + L AL+L
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682
Query: 583 QLTDRGLEPDIITYNTIICG 602
+ +G+ P+ TY ++I G
Sbjct: 683 DMKHKGISPNSATYTSLIKG 702
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 191/384 (49%), Gaps = 12/384 (3%)
Query: 232 ASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILID 291
A +F VL G P+ T + L+ + + + +K + ++++ + + PD+ +++ I+
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 281
Query: 292 GLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTY---DRMLNGG 348
K G+++E +L + G+ +VV F++V+D G+G GR + + ++M+ G
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID---GLGMCGRYDEAFMFKEKMVERG 338
Query: 349 FLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGF 408
P +I+YSIL+KGL + R+ +A + ++ + P+++ Y++LID F ++G L
Sbjct: 339 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 398
Query: 409 SLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGC 463
+ D M+ +GL + + LI NG +A R + + + N F +++
Sbjct: 399 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 458
Query: 464 CRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDV 523
C ++ M + N+ P T LI G+ G S A+ L+FQ L +G D
Sbjct: 459 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 518
Query: 524 ITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQ 583
T +A++HGL + + + K + G D YN L++ + LD A +
Sbjct: 519 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 578
Query: 584 LTDRGLEPDIITYNTIICGYCSLN 607
+ RGL+PD TY+ +ICG ++N
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMN 602
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 104/235 (44%), Gaps = 8/235 (3%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLM----SCLVDSNSVGQYY--K 168
YS LI + K++E+++ + G+ PD+ + C + GQ + +
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGML--PDVYTYSVMIDGCCKAERTEEGQEFFDE 648
Query: 169 LCRAMRGKGFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQ 228
+ VY L+ R G + A + + +G PN T ++K + I +
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 708
Query: 229 IGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSI 288
+ A LF+ + + G +PNV ++ LI+ + K ++ K L M ++ P+ I Y++
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768
Query: 289 LIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDR 343
+I G + G + E + LL ++G+ D + + + Y+ G V A + D
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 244/499 (48%), Gaps = 9/499 (1%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ +I + + + + E+ A+M G ++ L+ L V + + + +
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289
Query: 175 GKGF----CVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
GK Y L+ GL + E M +++ F P+ + +++ L G+I
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
A +L ++ G PN+ ++ LI++ CK K +A L++ M ++ L P+ + YSILI
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
D + G+L L +D GLKL V ++S+++ + GD+ A M+N
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
P V++Y+ L+ G C +G++ +A L+ ++ + + PS+ T+++L+ G ++G +RD L
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 411 YDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCR 465
++ M + +KP+ V +++I G M A F + ++P+ + + L+ G C
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 466 LKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVIT 525
+A++ + N + + I +T L+ G +G L A+ + +M++RG+ D++
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Query: 526 YSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLT 585
Y +I G K K+ + + K M G+ PD IY +++ K + A ++ +
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 586 DRGLEPDIITYNTIICGYC 604
+ G P+ +TY +I G C
Sbjct: 710 NEGCVPNEVTYTAVINGLC 728
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/537 (24%), Positives = 249/537 (46%), Gaps = 52/537 (9%)
Query: 116 SFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAM-- 173
S L+E + GKI+E++ + + D G+ SP+L + + L+DS G+ + +
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGV--SPNLF--VYNALIDSLCKGRKFHEAELLFD 391
Query: 174 -RGK-----GFCVYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCING 227
GK Y L++ R+G ++ A +++ G ++ N ++ C G
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451
Query: 228 QIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYS 287
I A ++ +P VVT+++L+ +C + K+ KA +LY+ M + P + ++
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 288 ILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNG 347
L+ GLF+AG +++ +L + +K + V ++ +++ Y GD+ +A + M
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 348 GFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDG 407
G +P+ SY LI GLC G+ EA + E + + Y+ L+ GFC+ GKL +
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 408 FSLYDNMIKRGLKPDAVVCSLLINGLMGDALRFFF-----QSVRMTLIPNLFIFNTLMDG 462
S+ M++RG+ D V +LI+G + R F + L P+ I+ +++D
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691
Query: 463 CCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM-------- 514
+ + ++ LM P+ +T+T +I G+ G ++ A +L +M
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751
Query: 515 ---------------------------LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFK 547
+ +GL + TY+ +I G + I +
Sbjct: 752 QVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELIT 811
Query: 548 LMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
M +GV+PD Y ++N L + ++ A++L+ +T++G+ PD + YNT+I G C
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/523 (26%), Positives = 243/523 (46%), Gaps = 24/523 (4%)
Query: 95 GKTYNFFRLFRDSLGDFG-----CDYSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDL 149
G+ ++ L D +G G YS LI+ + R GK+D ++ M D G+ LS
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439
Query: 150 VQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVYEFLMNGLLRKGVIENAFHMHRQVI 205
L++ + M K Y LM G KG I A ++ ++
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 206 QRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLE 265
+G P+I T +L L G I +A LF+ + KPN VT++ +I +C+E +
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 266 KAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRG-LKLDVVVFSSV 324
KAF+ M E +VPD Y LI GL G+ E ++ + L +G +L+ + ++ +
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGL 618
Query: 325 MDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRL 384
+ + G + A+ M+ G +++ Y +LI G + GL ++ R L
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 385 EPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALR 439
+P + Y+S+ID K+G ++ F ++D MI G P+ V + +INGL + +A
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 440 FFFQSVRMTLIPNLFIFNTLMD----GCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLI 495
+ ++ +PN + +D G +++A + + +L G+ + T+ +LI
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE-LHNAILKGLL---ANTATYNMLI 794
Query: 496 RGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVA 555
RG QG + A L +M+ G++PD ITY+ +I+ L + ++ + ++ M G+
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 556 PDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNT 598
PD YN L++ + A +L ++ +GL P+ T T
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 217/423 (51%), Gaps = 10/423 (2%)
Query: 204 VIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAK 263
+ + +P + T + +L L G A LF+ ++ VG +P+V ++ +I + C+
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 264 LEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSS 323
L +A ++ M +++ Y++LIDGL K ++ E + + LK DVV + +
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 324 VMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRR 383
++ + + ++ D ML F P+ + S L++GL ++G++ EA L +V+
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 384 LEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDAL 438
+ P+L Y++LID CK K + L+D M K GL+P+ V S+LI+ G + AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 439 RFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGI 498
F + V L +++ +N+L++G C+ + M ++P V+T+T L+ G
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 499 ASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDI 558
S+G ++ A+ L+ +M +G+ P + T++ ++ GLF+ I + +F M V P+
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 559 AIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC-----SLNSCLIDG 613
YNV++ +E ++ A + ++T++G+ PD +Y +I G C S +DG
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 614 YFK 616
K
Sbjct: 603 LHK 605
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 165/356 (46%), Gaps = 31/356 (8%)
Query: 251 FSTLINAFCKEAKLEKAFQLYNLMM-EMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTA 309
F LI + + ++ ++ +M+ ++ L+P++ S L+ GL K EL
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 310 LDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRL 369
+ G++ DV +++ V+ + + D+ RA + M G N++ Y++LI GLC++ ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 370 VEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLL 429
EA G+ + + L+P ++TY +L+ G CK + G + D M+
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML-------------- 324
Query: 430 INGLMGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVI 489
LRF P+ ++L++G + + + + L + + + P++
Sbjct: 325 -------CLRFS---------PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 490 THTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLM 549
+ LI + A LLF +M K GL P+ +TYS +I + + L M
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 550 ERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
G+ + YN L+N K ++ AA ++ ++ LEP ++TY +++ GYCS
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Query: 456 FNTLMDGCCRLKRATDTVKLF-MLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQM 514
F+ L+ R +R D V +F M++ ++ P+V T + L+ G+ A+ LF M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 515 LKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNL 574
+ G+ PDV Y+ +I L + K++S M ME G +I YNVL++ L K+ +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 575 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
A+ + L + L+PD++TY T++ G C +
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 247/552 (44%), Gaps = 54/552 (9%)
Query: 75 LQSDMRDVASHVFDKMVIQFGKTYNFFRLF---RDSL---GDFGCDYSFL---IENYVRI 125
L S+ + + F + F K +F RL+ DSL G+ + + + N+ I
Sbjct: 101 LASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEI 160
Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKGF----CVY 181
G+++E+V + M + G+ S + ++ V+ + + M +G Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 182 EFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLL 241
+ ++ G R G I+ A +IQRGF+P+ TC IL LC NG + A F ++
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 242 VGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKE 301
+G KPN++ F++LI+ CK+ +++AF++ M+ P++ ++ LIDGL K G ++
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 302 GNELLLTALDRGL-KLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILI 360
L L + K +V ++S++ Y + RA + RM G PNV +Y+ LI
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 361 KGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLK 420
G C+ G A L + P++ TY++ ID CK + + + L + GL+
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 421 PDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKL 475
D V ++LI + AL FF + + ++ + N L+ CR K+ ++ +L
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520
Query: 476 FMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFK 535
F L+ + P T+T +I +G + A+ F M + G PD TY ++I GL K
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580
Query: 536 GKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIIT 595
+ D A KL+ + DRGL P +T
Sbjct: 581 KSMV-----------------------------------DEACKLYEAMIDRGLSPPEVT 605
Query: 596 YNTIICGYCSLN 607
T+ YC N
Sbjct: 606 RVTLAYEYCKRN 617
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 204/426 (47%), Gaps = 18/426 (4%)
Query: 126 GKIDESVEIFAYMSDMGIYLSPDLVQ--RLMSCLVDSNSVGQYYKLCRAMRGKGF----C 179
G ++ ++ F M D+G P+L+ L+ L S+ Q +++ M G+
Sbjct: 266 GLVNRAIWYFRKMIDLG--FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323
Query: 180 VYEFLMNGLLRKGVIENAFHMHRQVIQRG-FVPNIVTCNKILKRLCINGQIGNASSLFDV 238
+ L++GL ++G E AF + ++++ + PN+ T ++ C ++ A LF
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383
Query: 239 LLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGR 298
+ G PNV T++TLIN CK +A++L NLM + +P++ Y+ ID L K R
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 299 LKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSI 358
E ELL A GL+ D V ++ ++ D+ +A+ + RM GF ++ +I
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNI 503
Query: 359 LIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRG 418
LI C+Q ++ E+ LF V+ L P+ TY+S+I +CK G + + NM + G
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563
Query: 419 LKPDAVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTV 473
PD+ LI+GL + +A + + + L P TL C + D+
Sbjct: 564 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC---KRNDSA 620
Query: 474 KLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGL 533
+L+ + K + T L+R + S+ + A L F ++L++ + D +T +A
Sbjct: 621 NAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 680
Query: 534 FK-GKN 538
+ GKN
Sbjct: 681 SESGKN 686
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 147/330 (44%), Gaps = 56/330 (16%)
Query: 285 IYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRM 344
+Y + D L G L++ +E V ++ + IG + AV M
Sbjct: 129 LYLVTADSLLANGNLQKAHE---------------VMRCMLRNFSEIGRLNEAVGMVMDM 173
Query: 345 LNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKL 404
N G P+ I+ + +++ + G + A +F ++ +R + P +Y ++ G + GK+
Sbjct: 174 QNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 233
Query: 405 RDGFSLYDNMIKRGLKPDAVVCSLLI-----NGLMGDALRFFFQSVRMTLIPNLFIFNTL 459
++ MI+RG PD C+L++ NGL+ A+ +F + + +
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL------------ 281
Query: 460 MDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGL 519
KP++I T LI G+ +GS+ A + +M++ G
Sbjct: 282 -----------------------GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318
Query: 520 TPDVITYSAIIHGLFKGKNISVGLHMF-KLMERNGVAPDIAIYNVLLNMLIKECNLDAAL 578
P+V T++A+I GL K +F KL+ + P++ Y ++ KE L+ A
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Query: 579 KLFGQLTDRGLEPDIITYNTIICGYCSLNS 608
LF ++ ++GL P++ TY T+I G+C S
Sbjct: 379 MLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 9/186 (4%)
Query: 118 LIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMRGKG 177
LI + R K+ ES +F + +G+ + + ++SC + K M+ G
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563
Query: 178 FCV-----YEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIGNA 232
CV Y L++GL +K +++ A ++ +I RG P VT + C NA
Sbjct: 564 -CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA 622
Query: 233 SSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDG 292
L + L K + T TL+ C E K+ A + ++E D D + +
Sbjct: 623 MILLEPL---DKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA 679
Query: 293 LFKAGR 298
++G+
Sbjct: 680 CSESGK 685
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 143/575 (24%), Positives = 264/575 (45%), Gaps = 16/575 (2%)
Query: 45 TNNPTPAIQFFKWT-HNCVSSPNIAQLIHVLLQSDMRDVASHVFDKMV----IQFGKTYN 99
+ +P P Q + N V+ + + VLLQ + + A V ++ F
Sbjct: 35 STDPEPESQPEQAPPTNPVTGDEKLRNLRVLLQQNRIETARGVLSSLLRSDSTPFASPKE 94
Query: 100 FFRLFRDSLGDFGCDYSFLIENYV--RIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCL 157
F F S D+S+L+ + + I E+ ++F + + GIY S D + L+ L
Sbjct: 95 LFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154
Query: 158 VDSNSVGQYYKLCRAMRGKGFCVYEFLMNGLLRKGV----IENAFHMHRQVIQRGFVPNI 213
V + + + F +F+ ++ V + + ++ P++
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSV 214
Query: 214 VTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNL 273
N ++ LC ++ +A LFD +L P+++T++TLI+ +CK EK+F++
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER 274
Query: 274 MMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGD 333
M + P LI ++ L+ GLFKAG +++ +L D G D FS + D Y
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
A+ Y+ ++ G N + SIL+ LC++G++ +A + G+ + + L P+ + Y++
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLIN-----GLMGDALRFFFQSVRMT 448
+IDG+C+ G L + M K+G+KPD + + LI G M +A + +
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
+ P++ +N L+ G R + M P+V+++ LI + L A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
++ M RG++P V Y+ +I G I K M + G+ ++ YN L++ L
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGY 603
L A L +++ +GL+PD+ TYN++I GY
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/549 (26%), Positives = 257/549 (46%), Gaps = 74/549 (13%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
Y+ LI+ + +++++ ++F M L +RL+ L+ N++ Y C+A
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEM----------LARRLLPSLITYNTLIDGY--CKAGN 264
Query: 175 -GKGFCVYE---------------FLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNK 218
K F V E L+ GL + G++E+A ++ +++ GFVP+ T +
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 219 ILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMD 278
+ N + A +++ + G K N T S L+NA CKE K+EKA ++ M
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384
Query: 279 LVPDLIIYSILIDGLFKAGRLKEGNELLLTALDR-GLKLDVVVFSSVMDAYVGIGD---- 333
LVP+ +IY+ +IDG + G L G + + A+++ G+K D + ++ ++ + +G+
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLV-GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 334 -----------VGRAVQTYD--------------------RMLNGGFLPNVISYSILIKG 362
V +V+TY+ M + G +PNV+SY LI
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 363 LCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPD 422
LC+ +L+EA + + R + P + Y+ LIDG C GK+ D F M+K+G++ +
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563
Query: 423 AVVCSLLINGL-----MGDALRFFFQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFM 477
V + LI+GL + +A + R L P++F +N+L+ G + L+
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 478 LMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGK 537
M IKP + T+ +LI +G + LF +M L PD++ Y+ ++H
Sbjct: 624 EMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHG 679
Query: 538 NISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYN 597
++ ++ K M + D YN L+ +K L L ++ R +EP+ TYN
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 598 TIICGYCSL 606
I+ G+C +
Sbjct: 740 IIVKGHCEV 748
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 191/404 (47%), Gaps = 5/404 (1%)
Query: 207 RGFVPNIVTCNKILKRLCINGQIGNASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEK 266
G P+ + +L L Q ++F +L +P+ + I A K + + K
Sbjct: 138 EGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK 197
Query: 267 AFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMD 326
+L+N M + P + IY++LIDGL K R+ + +L L R L ++ +++++D
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 327 AYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEP 386
Y G+ ++ + +RM P++I+++ L+KGL + G + +A + ++ P
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 387 SLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGLMGD-----ALRFF 441
T+S L DG+ + K +Y+ + G+K +A CS+L+N L + A
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 442 FQSVRMTLIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQ 501
+ + L+PN I+NT++DG CR M +KPD + + LIR
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 502 GSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIY 561
G + +A +M +G++P V TY+ +I G + + K ME NG P++ Y
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 562 NVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCS 605
L+N L K L A + + DRG+ P + YN +I G CS
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCS 541
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 224/483 (46%), Gaps = 11/483 (2%)
Query: 115 YSFLIENYVRIGKIDESVEIFAYMSDMGIYLSPDLVQRLMSCLVDSNSVGQYYKLCRAMR 174
+S L + Y K + ++ ++ D G+ ++ L++ L + + ++
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 175 GKGFC----VYEFLMNGLLRKGVIENAFHMHRQVIQRGFVPNIVTCNKILKRLCINGQIG 230
KG +Y +++G RKG + A + ++G P+ + N +++R C G++
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Query: 231 NASSLFDVLLLVGPKPNVVTFSTLINAFCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILI 290
NA + + L G P+V T++ LI + ++ + +K F + M + +P+++ Y LI
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 291 DGLFKAGRLKEGNELLLTALDRGLKLDVVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFL 350
+ L K +L E + DRG+ V +++ ++D G + A + ML G
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 351 PNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSL 410
N+++Y+ LI GL G+L EA L ++ + L+P + TY+SLI G+ +G ++ +L
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621
Query: 411 YDNMIKRGLKPDAVVCSLLINGLMGDAL----RFFFQSVRMTLIPNLFIFNTLMDGCCRL 466
Y+ M + G+KP LLI+ + + R F + M+L P+L ++N ++
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGE---MSLKPDLLVYNGVLHCYAVH 678
Query: 467 KRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAILLFFQMLKRGLTPDVITY 526
L M +I D T+ LI G G L L +M R + P+ TY
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Query: 527 SAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTD 586
+ I+ G + K+ ++ M+ G D+ I N L++ L +E A + ++
Sbjct: 739 NIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNG 798
Query: 587 RGL 589
R L
Sbjct: 799 RML 801
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 5/276 (1%)
Query: 334 VGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFGQVLIRRLEPSLLTYSS 393
+ A + + N G P+ S ++L+ L + + +F +L PS Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 394 LIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL-----MGDALRFFFQSVRMT 448
I K + G L++ M + P + ++LI+GL M DA + F + +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 449 LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHTVLIRGIASQGSLSSAI 508
L+P+L +NTL+DG C+ + K+ M +I+P +IT L++G+ G + A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 509 LLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERNGVAPDIAIYNVLLNML 568
+ +M G PD T+S + G + L +++ +GV + ++LLN L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 569 IKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYC 604
KE ++ A ++ G+ +GL P+ + YNT+I GYC
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 10/354 (2%)
Query: 258 FCKEAKLEKAFQLYNLMMEMDLVPDLIIYSILIDGLFKAGRLKEGNELLLTALDRGLKLD 317
F +L AF L + ++ D ++ S+L++ ++ + E +L + G+
Sbjct: 89 FASPKELFSAFSLSSPSLKHDF--SYLLLSVLLN---ESKMISEAADLFFALRNEGIYPS 143
Query: 318 VVVFSSVMDAYVGIGDVGRAVQTYDRMLNGGFLPNVISYSILIKGLCQQGRLVEACGLFG 377
+ ++D V + + +L F P+ Y I+ + + + LF
Sbjct: 144 SDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFN 203
Query: 378 QVLIRRLEPSLLTYSSLIDGFCKSGKLRDGFSLYDNMIKRGLKPDAVVCSLLINGL--MG 435
++ R+ PS+ Y+ LIDG CK ++ D L+D M+ R L P + + LI+G G
Sbjct: 204 RMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAG 263
Query: 436 DALRFFFQSVRMT---LIPNLFIFNTLMDGCCRLKRATDTVKLFMLMGMYNIKPDVITHT 492
+ + F RM + P+L FNTL+ G + D + M PD T +
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 493 VLIRGIASQGSLSSAILLFFQMLKRGLTPDVITYSAIIHGLFKGKNISVGLHMFKLMERN 552
+L G +S +A+ ++ + G+ + T S +++ L K I +
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 553 GVAPDIAIYNVLLNMLIKECNLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL 606
G+ P+ IYN +++ ++ +L A + +G++PD + YN +I +C L
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.144 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,178,649
Number of Sequences: 539616
Number of extensions: 9139301
Number of successful extensions: 36700
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 24239
Number of HSP's gapped (non-prelim): 3260
length of query: 619
length of database: 191,569,459
effective HSP length: 124
effective length of query: 495
effective length of database: 124,657,075
effective search space: 61705252125
effective search space used: 61705252125
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)