BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047660
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1
Length = 269
Score = 226 bits (577), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/166 (72%), Positives = 139/166 (83%)
Query: 1 MALSNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARF 60
M LSNNVI IN + +LLSIPVIGAGIWLA NSCVKLLQWPVIILG+LIL+V LA F
Sbjct: 1 MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60
Query: 61 IGGFWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSGW 120
IGGFWRI WLL++YL+AMLILI+LL CLV FIYMV I+GSG+ PSRAYLEY L DFSGW
Sbjct: 61 IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120
Query: 121 LCRRVRSPYKWDRIKSYLSSTQMCPELNQSYRMAQDFFNAHITPLQ 166
L RRV+ YKW+RI++ LS+T +CPELNQ Y +AQDFFNAH+ P+Q
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQ 166
>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1
Length = 273
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Query: 4 SNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARFIGG 63
SNN++ +N + LLSIP++ GIWL+ + C + L PVI LG+ ++VVA+A IG
Sbjct: 5 SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64
Query: 64 FWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSGWLCR 123
R+ WLL +YL M +LI+L+ C+ VF ++V KG+G + Y EY+L D+S WL +
Sbjct: 65 CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124
Query: 124 RVRSPYKWDRIKSYLSSTQMCPELNQSYRM--AQDFFNAHITPLQ 166
RV + W++I+S L +++C +L + F+ H+T LQ
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQ 169
>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1
Length = 285
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 109/171 (63%), Gaps = 5/171 (2%)
Query: 1 MALSNNVIRPINLVAILLSIPVIGAGIWLATEADNS-CVKLLQWPVIILGILILVVALAR 59
M SN++I +N + LLSIP++G GIWL++ A+++ C++ LQWP+I++GI I+VV+LA
Sbjct: 1 MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60
Query: 60 FIGGFWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSG 119
F G +R +L+ LYLV ML++I L ++F Y V KGSG +R YL+Y L+D+SG
Sbjct: 61 FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120
Query: 120 WLCRRVRSPYKWDRIKSYLSSTQMCPELNQSY----RMAQDFFNAHITPLQ 166
WL RV W +I S L + C ++ +++ A FF ++P++
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVE 171
>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1
Length = 270
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
Query: 1 MALSNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARF 60
MAL+NN+ +NL+A+L SIP+ +GIWLA++ DN CV LL+WPV++LG+LILVV+ F
Sbjct: 1 MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60
Query: 61 IGGFWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSGW 120
IG + LL +YL M ILI LL +++F ++V Y P R Y EYRL+ FS W
Sbjct: 61 IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120
Query: 121 LCRRVRSPYKWDRIKSYLSSTQMCPELNQSYRMAQDFF-NAHITPLQ 166
L V W R+++ L+ T +CP+LNQ + A FF ++ ITPLQ
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQ 167
>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1
Length = 263
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Query: 4 SNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARFIGG 63
SNN++ +N LLSIP++ AGIWL A C + L P+++LGI ++ V++A +G
Sbjct: 5 SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64
Query: 64 FWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSGWLCR 123
R+ LL LYL AM +LI+L C +F + V +G+G + R Y EY + D+S WL +
Sbjct: 65 CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQK 124
Query: 124 RVRSPYKWDRIKSYLSSTQMCPELNQSYRM--AQDFFNAHITPLQ 166
RV + W+RI+S L + +C Y +DF+ +++ LQ
Sbjct: 125 RVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQ 169
>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1
Length = 272
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 3 LSNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARFIG 62
SN+++ +N LLS+P++ GIWL+ +A C + L P+I LG+ ++++A+A +G
Sbjct: 4 FSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVG 63
Query: 63 GFWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSGWLC 122
R+ WLL YL M LI+++ C +F ++V KGSG +AY EYRL+ +S WL
Sbjct: 64 SCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQ 123
Query: 123 RRVRSPYKWDRIKSYLSSTQMCP--ELNQSYRMAQDFFNAHITPLQ 166
RRV + W+ I+S L ++ C EL + DF+ +T +
Sbjct: 124 RRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFE 169
>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1
Length = 282
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 97/164 (59%), Gaps = 3/164 (1%)
Query: 3 LSNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARFIG 62
SN VI +NL+ +L SIP+IG ++ A + +C LQ P++++G +IL+V+LA FIG
Sbjct: 4 FSNTVIGVLNLLTLLASIPIIGTALYKA-RSSTTCENFLQTPLLVIGFIILIVSLAGFIG 62
Query: 63 GFWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSGWLC 122
+ + W L +YLV M+ LI L L +F +V +G G P R Y EYRL D+ WL
Sbjct: 63 ACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPWLR 122
Query: 123 RRVRSPYKWDRIKSYLSSTQMCPELNQSYRMAQDFFNAHITPLQ 166
RVR P W+ I+S + S++ C ++ + D+F +T +Q
Sbjct: 123 ERVRDPEYWNSIRSCILSSKTCTKIESWTTL--DYFQRDMTSVQ 164
>sp|F4I214|TET10_ARATH Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1
Length = 284
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
Query: 1 MALSNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARF 60
M S VIR +NL+ +LL++ VI G+W++T D C + L +PVI LG I ++++ F
Sbjct: 3 MGTSTFVIRWVNLLTMLLAVAVIIFGVWMSTHND-GCRRSLTFPVIALGGFIFLISIIGF 61
Query: 61 IGGFWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSGW 120
+G R LL +YL +LI++I + V ++V GSG+ P Y EY+L+D+S W
Sbjct: 62 LGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSW 121
Query: 121 LCRRVRSPYKWDRIKSYLSSTQMCPELNQSYRMAQDFFNAHITPLQ 166
+++ + W R+KS L ++ C +L++ Y+ + +A +TP++
Sbjct: 122 FLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIE 167
>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1
Length = 327
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 102/171 (59%), Gaps = 5/171 (2%)
Query: 1 MALSNNVIRPINLVAILLSIPVIGAGIWLATEADNS-CVKLLQWPVIILGILILVVALAR 59
M +N+I IN LLSIP++G GIWL++ A+++ C++ LQWP+II+GI I+V++LA
Sbjct: 1 MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60
Query: 60 FIGGFWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSG 119
G ++ +L+ LYL M +I L +F Y+V KGSG +R YL+Y L+D+SG
Sbjct: 61 IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120
Query: 120 WLCRRVRSPYKWDRIKSYLSSTQMCP----ELNQSYRMAQDFFNAHITPLQ 166
WL RV W I S + + +C +LN A F+ +++P++
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVE 171
>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1
Length = 271
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 89/167 (53%), Gaps = 4/167 (2%)
Query: 3 LSNNVIRPINLVAILLSIPVIGAGIWL-ATEADNSCVKLLQWPVIILGILILVVALARFI 61
+SN ++ N + +L+ IG I++ + C ++ P++ G+++ +V+L I
Sbjct: 4 VSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGVI 63
Query: 62 GGFWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSGWL 121
G ++ + ++ YL+ + I+ L +F++ V KG+G + R Y EYR DFS WL
Sbjct: 64 GSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWL 123
Query: 122 CRRVRSPYKWDRIKSYLSSTQMCPELNQS--YRMAQDFFNAHITPLQ 166
V +W I+S L+ +C +L+ ++A F++ +++P+Q
Sbjct: 124 NGFVGGK-RWVGIRSCLAEANVCDDLSDGRVSQIADAFYHKNLSPIQ 169
>sp|Q84WF6|TET5_ARATH Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1
Length = 281
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 3 LSNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARFIG 62
+SN VI +N++ ++ SI ++G+ +W+ + +C LQ P++ILG+ IL++++A +G
Sbjct: 4 MSNTVIGFLNILTLISSIVLLGSALWMG-RSKTTCEHFLQKPLLILGLAILILSVAGLVG 62
Query: 63 GFWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSGWLC 122
+ W+L +YL M+ +I+ L L +F ++V G + R Y E++L+ + WL
Sbjct: 63 ACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEAYHPWLK 122
Query: 123 RRVRSPYKWDRIKSYLSSTQMCPELNQSYRMAQDFFNAHITPLQ 166
RV W IK+ L + C +L + D+ ++PLQ
Sbjct: 123 TRVVDTNYWVTIKTCLLGSVTCSKL--ALWTPLDYLQKDLSPLQ 164
>sp|Q9SI56|TET13_ARATH Tetraspanin-13 OS=Arabidopsis thaliana GN=TET13 PE=3 SV=1
Length = 278
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 6 NVIRPINLVAILLS-IPVIGAGIWLAT-----EADNSCVKLLQWPVIILGILILVVALAR 59
N+ P N + ++ S I ++ A W + C + + P I + +L ++L
Sbjct: 18 NMSFPFNTIFLISSAIFLVTAAFWFVAVMTLHYRTDECNRFVTTPGIFISFSLLAMSLTG 77
Query: 60 FIGGFWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSG 119
F +++ L ++ + + ++ +F+ + + + L P E+R +D+SG
Sbjct: 78 FYAAYFKSDCLFRIHFFIFFLWMFVVVSKAIFVIFLHKETNPRLFPGTKIYEFRYEDYSG 137
Query: 120 WLCRRVRSPYKWDRIKSYLSSTQMCPELNQSYRM-AQDFFNAHITPLQ 166
W+ R V +W R + L +C LN ++M A +F+ ++TP+Q
Sbjct: 138 WVSRLVIKDDEWYRTRRCLVKDNVCNRLN--HKMPASEFYQMNLTPIQ 183
>sp|Q9FN51|TET12_ARATH Tetraspanin-12 OS=Arabidopsis thaliana GN=TET12 PE=2 SV=1
Length = 264
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 1 MALSNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARF 60
+ LSN + N + L+ + + +++ + + C + +Q P+I+ L+ ++
Sbjct: 2 LRLSNAAVITTNAILALIGLAALSFSVYVYVQGPSQCQRFVQNPLIVTAALLFFISSLGL 61
Query: 61 IGGFWRIHWLLILYLVAMLILIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDFSGW 120
I + H ++ LYL + + I+LL L VFI++V +G R + D+ W
Sbjct: 62 IAALYGSHIIITLYLFFLFLSILLLLVLSVFIFLVTNPTAGKALSGRGIGNVKTGDYQNW 121
Query: 121 LCRRVRSPYKWDRIKSYLSSTQMCPELNQSYRMAQDFFNAHITPLQ 166
+ W+ I LS +++C DF + H++ +Q
Sbjct: 122 IGNHFLRGKNWEGITKCLSDSRVCKRFGP---RDIDFDSKHLSNVQ 164
>sp|P34330|YKZ3_CAEEL Uncharacterized protein C14B9.3 OS=Caenorhabditis elegans
GN=C14B9.3 PE=4 SV=2
Length = 348
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 32 EADNSCVKLLQWPVIILGILILVVALARFIGGFW 65
E DNS + L +PVI+ ++ V+++ F+GG +
Sbjct: 46 EDDNSDIAYLNFPVIVPSLVFTVISMGCFVGGIF 79
>sp|C0SJS4|C71AJ_APIGR Psoralen synthase (Fragment) OS=Apium graveolens GN=CYP71AJ2 PE=1
SV=1
Length = 476
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 4 SNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALA 58
SNN + V+ILL I AG + DN C+K L W ++ G + AL
Sbjct: 250 SNNASADNDFVSILLEIQEADAGSTM----DNECIKSLIWDMLGAGTETISTALE 300
>sp|Q6A5S0|KUP_PROAC Probable potassium transport system protein kup
OS=Propionibacterium acnes (strain KPA171202 / DSM
16379) GN=kup PE=3 SV=1
Length = 651
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 43 WPVIILGILILVVALARFIGGFWRI---HWLLILYLVAMLILIILLACLVVFIYMVMIKG 99
W +I G+++ V L+ F +I W+ +L+ A +VV I +G
Sbjct: 416 WALIFFGVIVGGVELSIFSANLLKIASGGWIPLLF-----------ATIVVIIMTTWRRG 464
Query: 100 SGYLAPSRAYLEYRLDDFSGWL--CRRVRSP 128
+ Y+A R E LDDF W+ + R P
Sbjct: 465 TAYIAKQRQDDEGPLDDFLNWMHETKPTRVP 495
>sp|A6LAI2|NHAA_PARD8 Na(+)/H(+) antiporter NhaA OS=Parabacteroides distasonis (strain
ATCC 8503 / DSM 20701 / NCTC 11152) GN=nhaA PE=3 SV=1
Length = 453
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 60 FIGGFWRIHWLLILYLVAMLI-LIILLACLVVFIYMVMIKGSGYLAPSRAYLEYRLDDF- 117
++GG +R+H L Y+ ++ L+ L + + I V+I + P+R + +LDDF
Sbjct: 207 YVGGKFRVHNRLFFYIGGFIVWLLFLESGIHPTIAGVLI---AFTVPARPVV--KLDDFT 261
Query: 118 ---SGWLCRRVRSPYKWDRIKSYLSSTQMCPELNQSYRMAQDFFNAHITPLQVI 168
+G+L + + R L+ TQ+ LN + +A + I+PLQ I
Sbjct: 262 CDMTGYLNMLDYTEVRQSRKAEVLTPTQI-QVLNNIHTLA----DKTISPLQTI 310
>sp|Q01214|MTF1_MUCCL Putative transcription factor MTF1 OS=Mucor circinelloides f.
lusitanicus GN=MTF1 PE=2 SV=1
Length = 353
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 40 LLQWPVIILGILILVVALARFIGGFWR-IHWLLILYLVAMLILIILLACLVVFIYMVMIK 98
L W V+ILG+ +LA +GG R I LL+L+ L+ + L ++ K
Sbjct: 276 LFGWNVLILGLF--EESLAHMVGGTRRFIQLLLVLFTTVSLVRVCL--------GLIFSK 325
Query: 99 GSGYLAPSRAYLEYRLDDFSGWLC 122
+GY PS + + + S LC
Sbjct: 326 ATGYAFPS-LFFSNTMHECSQGLC 348
>sp|Q12999|TSN31_HUMAN Tetraspanin-31 OS=Homo sapiens GN=TSPAN31 PE=2 SV=1
Length = 210
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 2 ALSNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARFI 61
A S N + +N+V +L+S+ +IG W S + ++ VI +G+ +L++A+A +
Sbjct: 7 ACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIG-GVIAVGVFLLLIAVAGLV 65
Query: 62 GGFWRIHWLLILYLVAMLILIIL 84
G LL Y++ + ++ I
Sbjct: 66 GAVNHHQVLLFFYMIILGLVFIF 88
>sp|Q5RAP8|TSN31_PONAB Tetraspanin-31 OS=Pongo abelii GN=TSPAN31 PE=2 SV=1
Length = 210
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 2 ALSNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARFI 61
A S N + +N+V +L+S+ +IG W S + ++ VI +G+ +L++A+A +
Sbjct: 7 ACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIG-GVIAVGVFLLLIAVAGLV 65
Query: 62 GGFWRIHWLLILYLVAMLILIIL 84
G LL Y++ + ++ I
Sbjct: 66 GAVNHHQVLLFFYMIILGLVFIF 88
>sp|Q8GYY0|1A112_ARATH Probable aminotransferase ACS12 OS=Arabidopsis thaliana GN=ACS12
PE=2 SV=2
Length = 495
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 18 LSIPVIGAGIWLATEAD--NSCVKLLQW---PVIILGILILVVALARFIGGFWRIH 68
LSIP AG+ + D N+ KL+++ PV++ ILI +++ RFI G+ H
Sbjct: 336 LSIPGFRAGVIYSFHEDVVNAAKKLMRFSSVPVLVQRILISLLSDVRFIEGYMAAH 391
>sp|Q32KP1|TSN31_BOVIN Tetraspanin-31 OS=Bos taurus GN=TSPAN31 PE=2 SV=1
Length = 210
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 2 ALSNNVIRPINLVAILLSIPVIGAGIWLATEADNSCVKLLQWPVIILGILILVVALARFI 61
A S N + +N+V +L+ + +IG W S + ++ VI +G+ +L++A+A +
Sbjct: 7 ACSKNALCALNVVYMLVGLLLIGVAAWAKGLGLVSSIHIIG-GVIAVGVFLLLIAVAGLV 65
Query: 62 GGFWRIHWLLILYLVAMLILIIL 84
G LL Y++ + ++ I
Sbjct: 66 GAVNHHQVLLFFYMIILGLVFIF 88
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.333 0.145 0.467
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,346,122
Number of Sequences: 539616
Number of extensions: 2130014
Number of successful extensions: 9196
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 9149
Number of HSP's gapped (non-prelim): 89
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 57 (26.6 bits)